APL_RS00005 PF00308 Bacterial dnaA protein APL_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix APL_RS00005 PF11638 DnaA N-terminal domain APL_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain APL_RS00010 PF02767 DNA polymerase III beta subunit, central domain APL_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain APL_RS00015 PF02463 RecF/RecN/SMC N terminal domain APL_RS00020 PF00080 Copper/zinc superoxide dismutase (SODC) APL_RS00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain APL_RS00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain APL_RS00030 PF13609 Gram-negative porin APL_RS00035 PF02684 APL_RS00035 APL_RS00040 PF01343 Peptidase family S49 APL_RS00040 PF08496 APL_RS00040 APL_RS00045 PF02381 MraZ protein APL_RS00050 PF01795 MraW methylase family APL_RS00055 PF04999 APL_RS00055 APL_RS00060 PF00905 Penicillin binding protein transpeptidase domain APL_RS00060 PF03717 Penicillin-binding Protein dimerisation domain APL_RS00065 PF01225 Mur ligase family, catalytic domain APL_RS00065 PF02875 Mur ligase family, glutamate ligase domain APL_RS00065 PF08245 Mur ligase middle domain APL_RS00070 PF01225 Mur ligase family, catalytic domain APL_RS00070 PF02875 Mur ligase family, glutamate ligase domain APL_RS00070 PF08245 Mur ligase middle domain APL_RS00075 PF00953 Glycosyl transferase family 4 APL_RS00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APL_RS00080 PF02875 Mur ligase family, glutamate ligase domain APL_RS00080 PF08245 Mur ligase middle domain APL_RS00085 PF01098 APL_RS00085 APL_RS00090 PF03033 Glycosyltransferase family 28 N-terminal domain APL_RS00090 PF04101 Glycosyltransferase family 28 C-terminal domain APL_RS00095 PF01225 Mur ligase family, catalytic domain APL_RS00095 PF02875 Mur ligase family, glutamate ligase domain APL_RS00095 PF08245 Mur ligase middle domain APL_RS00100 PF01820 D-ala D-ala ligase N-terminus APL_RS00100 PF07478 D-ala D-ala ligase C-terminus APL_RS00105 PF03799 Cell division protein FtsQ APL_RS00105 PF08478 POTRA domain, FtsQ-type APL_RS00110 PF02491 SHS2 domain inserted in FTSA APL_RS00110 PF14450 Cell division protein FtsA APL_RS00115 PF00091 Tubulin/FtsZ family, GTPase domain APL_RS00115 PF12327 FtsZ family, C-terminal domain APL_RS00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APL_RS00125 PF02463 RecF/RecN/SMC N terminal domain APL_RS00130 PF00005 ABC transporter APL_RS00135 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS00150 PF00009 Elongation factor Tu GTP binding domain APL_RS00150 PF03144 Elongation factor Tu domain 2 APL_RS00150 PF16658 APL_RS00150 APL_RS00155 PF05656 APL_RS00155 APL_RS00160 PF05656 APL_RS00160 APL_RS00165 PF01195 Peptidyl-tRNA hydrolase APL_RS00170 PF01926 50S ribosome-binding GTPase APL_RS00170 PF06071 Protein of unknown function (DUF933) APL_RS00175 PF04191 Phospholipid methyltransferase APL_RS00185 PF05433 APL_RS00185 APL_RS00190 PF06185 YecM protein APL_RS00195 PF00750 tRNA synthetases class I (R) APL_RS00195 PF03485 Arginyl tRNA synthetase N terminal domain APL_RS00195 PF05746 DALR anticodon binding domain APL_RS00200 PF01018 GTP1/OBG APL_RS00200 PF01926 50S ribosome-binding GTPase APL_RS00205 PF10786 APL_RS00205 APL_RS00210 PF00588 SpoU rRNA Methylase family APL_RS00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding APL_RS00215 PF13091 PLD-like domain APL_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) APL_RS00220 PF06827 Zinc finger found in FPG and IleRS APL_RS00220 PF08264 Anticodon-binding domain of tRNA APL_RS00225 PF01687 Riboflavin kinase APL_RS00225 PF06574 FAD synthetase APL_RS00230 PF01381 Helix-turn-helix APL_RS00230 PF01467 Cytidylyltransferase APL_RS00230 PF13521 AAA domain APL_RS00235 PF00149 Calcineurin-like phosphoesterase APL_RS00240 PF00072 Response regulator receiver domain APL_RS00240 PF00486 Transcriptional regulatory protein, C terminal APL_RS00245 PF13505 Outer membrane protein beta-barrel domain APL_RS00250 PF00872 APL_RS00250 APL_RS00255 PF08282 haloacid dehalogenase-like hydrolase APL_RS00260 PF01168 Alanine racemase, N-terminal domain APL_RS00265 PF00009 Elongation factor Tu GTP binding domain APL_RS00265 PF00679 Elongation factor G C-terminus APL_RS00265 PF03144 Elongation factor Tu domain 2 APL_RS00270 PF00462 Glutaredoxin APL_RS00275 PF01138 3' exoribonuclease family, domain 1 APL_RS00275 PF03725 3' exoribonuclease family, domain 2 APL_RS00280 PF03755 APL_RS00280 APL_RS00280 PF08340 APL_RS00280 APL_RS00285 PF01571 Aminomethyltransferase folate-binding domain APL_RS00290 PF00037 4Fe-4S binding domain APL_RS00295 PF00072 Response regulator receiver domain APL_RS00295 PF00196 Bacterial regulatory proteins, luxR family APL_RS00300 PF01170 Putative RNA methylase family UPF0020 APL_RS00300 PF02926 THUMP domain APL_RS00300 PF10672 S-adenosylmethionine-dependent methyltransferase APL_RS00305 PF00588 SpoU rRNA Methylase family APL_RS00310 PF00923 Transaldolase APL_RS00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS00345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS00355 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS00355 PF12911 APL_RS00355 APL_RS00360 PF00005 ABC transporter APL_RS00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APL_RS00365 PF00005 ABC transporter APL_RS00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APL_RS00370 PF06146 APL_RS00370 APL_RS00380 PF01042 Endoribonuclease L-PSP APL_RS00385 PF01063 Aminotransferase class IV APL_RS00390 PF00462 Glutaredoxin APL_RS00395 PF02132 RecR protein APL_RS00395 PF13662 Toprim domain APL_RS00400 PF02575 YbaB/EbfC DNA-binding family APL_RS00405 PF03544 Gram-negative bacterial TonB protein C-terminal APL_RS00410 PF02472 Biopolymer transport protein ExbD/TolR APL_RS00415 PF01618 APL_RS00415 APL_RS00420 PF00581 Rhodanese-like domain APL_RS00425 PF00085 Thioredoxin APL_RS00425 PF14559 Tetratricopeptide repeat APL_RS00425 PF14561 Tetratricopeptide repeat APL_RS00430 PF03610 PTS system fructose IIA component APL_RS00435 PF02734 DAK2 domain APL_RS00440 PF02733 Dak1 domain APL_RS00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase APL_RS00450 PF02348 Cytidylyltransferase APL_RS00455 PF06078 Bacterial protein of unknown function (DUF937) APL_RS00460 PF00293 NUDIX domain APL_RS00460 PF09297 NADH pyrophosphatase zinc ribbon domain APL_RS00465 PF00849 RNA pseudouridylate synthase APL_RS00470 PF00892 EamA-like transporter family APL_RS00475 PF04186 APL_RS00475 APL_RS00480 PF00557 Metallopeptidase family M24 APL_RS00485 PF01206 Sulfurtransferase TusA APL_RS00490 PF06877 Regulator of ribonuclease activity B APL_RS00495 PF01926 50S ribosome-binding GTPase APL_RS00500 PF05656 APL_RS00500 APL_RS00505 PF02535 APL_RS00505 APL_RS00510 PF00920 Dehydratase family APL_RS00515 PF13710 ACT domain APL_RS00520 PF00205 Thiamine pyrophosphate enzyme, central domain APL_RS00520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APL_RS00520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APL_RS00525 PF02335 Cytochrome c552 APL_RS00530 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) APL_RS00535 PF12798 4Fe-4S binding domain APL_RS00535 PF13247 4Fe-4S dicluster domain APL_RS00540 PF03916 APL_RS00540 APL_RS00550 PF00860 Permease family APL_RS00555 PF00171 Aldehyde dehydrogenase family APL_RS00555 PF01619 Proline dehydrogenase APL_RS00555 PF14850 DNA-binding domain of Proline dehydrogenase APL_RS00560 PF00474 Sodium:solute symporter family APL_RS00565 PF01614 Bacterial transcriptional regulator APL_RS00565 PF09339 IclR helix-turn-helix domain APL_RS00570 PF01812 5-formyltetrahydrofolate cyclo-ligase family APL_RS00575 PF05164 Cell division protein ZapA APL_RS00580 PF03695 Uncharacterised protein family (UPF0149) APL_RS00585 PF01208 Uroporphyrinogen decarboxylase (URO-D) APL_RS00590 PF04222 Protein of unknown function (DUF416) APL_RS00595 PF00216 Bacterial DNA-binding protein APL_RS00600 PF00303 Thymidylate synthase APL_RS00610 PF04055 Radical SAM superfamily APL_RS00610 PF06968 Biotin and Thiamin Synthesis associated domain APL_RS00615 PF00313 'Cold-shock' DNA-binding domain APL_RS00620 PF04352 ProQ/FINO family APL_RS00625 PF00595 PDZ domain (Also known as DHR or GLGF) APL_RS00625 PF03572 Peptidase family S41 APL_RS00625 PF11818 APL_RS00625 APL_RS00630 PF03734 L,D-transpeptidase catalytic domain APL_RS00635 PF05951 APL_RS00635 APL_RS00640 PF00753 Metallo-beta-lactamase superfamily APL_RS00645 PF01636 Phosphotransferase enzyme family APL_RS00650 PF07233 Protein of unknown function (DUF1425) APL_RS00655 PF01230 HIT domain APL_RS00660 PF00950 APL_RS00660 APL_RS00665 PF00950 APL_RS00665 APL_RS00670 PF01351 Ribonuclease HII APL_RS00675 PF03193 Protein of unknown function, DUF258 APL_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS00680 PF03466 LysR substrate binding domain APL_RS00685 PF13419 Haloacid dehalogenase-like hydrolase APL_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS00690 PF03466 LysR substrate binding domain APL_RS00700 PF00710 Asparaginase APL_RS00705 PF00117 Glutamine amidotransferase class-I APL_RS00705 PF06418 CTP synthase N-terminus APL_RS00710 PF10063 APL_RS00710 APL_RS00715 PF00694 Aconitase C-terminal domain APL_RS00720 PF00330 Aconitase family (aconitate hydratase) APL_RS00725 PF05651 APL_RS00725 APL_RS00725 PF13556 PucR C-terminal helix-turn-helix domain APL_RS00730 PF02447 APL_RS00730 APL_RS00735 PF02595 Glycerate kinase family APL_RS00740 PF00708 Acylphosphatase APL_RS00745 PF11398 Protein of unknown function (DUF2813) APL_RS00750 PF03641 Possible lysine decarboxylase APL_RS00750 PF11892 Domain of unknown function (DUF3412) APL_RS00750 PF14793 Domain of unknown function (DUF4478) APL_RS00755 PF01207 Dihydrouridine synthase (Dus) APL_RS00760 PF00268 Ribonucleotide reductase, small chain APL_RS00765 PF02867 Ribonucleotide reductase, barrel domain APL_RS00770 PF01106 NifU-like domain APL_RS00770 PF01521 Iron-sulphur cluster biosynthesis APL_RS00775 PF05896 APL_RS00775 APL_RS00775 PF11973 APL_RS00775 APL_RS00780 PF03116 APL_RS00780 APL_RS00785 PF04205 FMN-binding domain APL_RS00790 PF02508 APL_RS00790 APL_RS00795 PF02508 APL_RS00795 APL_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain APL_RS00800 PF00175 Oxidoreductase NAD-binding domain APL_RS00800 PF00970 Oxidoreductase FAD-binding domain APL_RS00805 PF02424 ApbE family APL_RS00810 PF04400 APL_RS00810 APL_RS00815 PF03054 tRNA methyl transferase APL_RS00820 PF12832 MFS_1 like family APL_RS00825 PF03807 NADP oxidoreductase coenzyme F420-dependent APL_RS00825 PF14748 Pyrroline-5-carboxylate reductase dimerisation APL_RS00830 PF04381 Putative exonuclease, RdgC APL_RS00835 PF13419 Haloacid dehalogenase-like hydrolase APL_RS00840 PF13597 Anaerobic ribonucleoside-triphosphate reductase APL_RS00845 PF13353 4Fe-4S single cluster domain APL_RS00850 PF02508 APL_RS00850 APL_RS00855 PF04060 Putative Fe-S cluster APL_RS00855 PF14697 4Fe-4S dicluster domain APL_RS00860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APL_RS00860 PF10531 SLBB domain APL_RS00860 PF12838 4Fe-4S dicluster domain APL_RS00860 PF13375 RnfC Barrel sandwich hybrid domain APL_RS00865 PF03458 APL_RS00865 APL_RS00870 PF03116 APL_RS00870 APL_RS00875 PF04205 FMN-binding domain APL_RS00880 PF02508 APL_RS00880 APL_RS00885 PF03279 APL_RS00885 APL_RS00890 PF01979 Amidohydrolase family APL_RS00895 PF13531 Bacterial extracellular solute-binding protein APL_RS00900 PF01258 Prokaryotic dksA/traR C4-type zinc finger APL_RS00905 PF01743 Poly A polymerase head domain APL_RS00905 PF12626 Polymerase A arginine-rich C-terminus APL_RS00905 PF12627 Probable RNA and SrmB- binding site of polymerase A APL_RS00910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APL_RS00915 PF13617 APL_RS00915 APL_RS00920 PF11739 APL_RS00920 APL_RS00930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APL_RS00935 PF00929 Exonuclease APL_RS00945 PF01817 Chorismate mutase type II APL_RS00945 PF02153 Prephenate dehydrogenase APL_RS00950 PF00793 DAHP synthetase I family APL_RS00955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS00960 PF00224 Pyruvate kinase, barrel domain APL_RS00960 PF02887 Pyruvate kinase, alpha/beta domain APL_RS00965 PF00300 Histidine phosphatase superfamily (branch 1) APL_RS00970 PF01207 Dihydrouridine synthase (Dus) APL_RS00975 PF02954 Bacterial regulatory protein, Fis family APL_RS00980 PF00209 Sodium:neurotransmitter symporter family APL_RS00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase APL_RS00990 PF01761 3-dehydroquinate synthase APL_RS00995 PF01202 Shikimate kinase APL_RS01000 PF00905 Penicillin binding protein transpeptidase domain APL_RS01000 PF00912 Transglycosylase APL_RS01000 PF17092 APL_RS01000 APL_RS01025 PF00263 APL_RS01025 APL_RS01025 PF03958 Bacterial type II/III secretion system short domain APL_RS01030 PF01029 NusB family APL_RS01035 PF00586 AIR synthase related protein, N-terminal domain APL_RS01035 PF02769 AIR synthase related protein, C-terminal domain APL_RS01040 PF04608 Phosphatidylglycerophosphatase A APL_RS01045 PF01810 APL_RS01045 APL_RS01050 PF00588 SpoU rRNA Methylase family APL_RS01050 PF08032 RNA 2'-O ribose methyltransferase substrate binding APL_RS01055 PF00459 Inositol monophosphatase family APL_RS01060 PF02779 Transketolase, pyrimidine binding domain APL_RS01060 PF02780 Transketolase, C-terminal domain APL_RS01060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APL_RS01065 PF13333 APL_RS01065 APL_RS01070 PF13276 APL_RS01070 APL_RS01075 PF13518 Helix-turn-helix domain APL_RS01080 PF00464 Serine hydroxymethyltransferase APL_RS01085 PF01513 ATP-NAD kinase APL_RS01095 PF01867 CRISPR associated protein Cas1 APL_RS01100 PF09618 CRISPR-associated protein (Cas_Csy4) APL_RS01105 PF09615 APL_RS01105 APL_RS01110 PF09614 APL_RS01110 APL_RS01115 PF09611 APL_RS01115 APL_RS01120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APL_RS01120 PF02824 TGS domain APL_RS01120 PF03129 Anticodon binding domain APL_RS01120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APL_RS01125 PF03783 Curli production assembly/transport component CsgG APL_RS01130 PF16068 APL_RS01130 APL_RS01135 PF05643 Putative bacterial lipoprotein (DUF799) APL_RS01140 PF00707 Translation initiation factor IF-3, C-terminal domain APL_RS01140 PF05198 Translation initiation factor IF-3, N-terminal domain APL_RS01145 PF01632 Ribosomal protein L35 APL_RS01150 PF00453 Ribosomal protein L20 APL_RS01165 PF00571 CBS domain APL_RS01165 PF01595 APL_RS01165 APL_RS01165 PF03471 Transporter associated domain APL_RS01170 PF00849 RNA pseudouridylate synthase APL_RS01175 PF00300 Histidine phosphatase superfamily (branch 1) APL_RS01180 PF03652 Uncharacterised protein family (UPF0081) APL_RS01185 PF02622 Uncharacterized ACR, COG1678 APL_RS01190 PF04452 RNA methyltransferase APL_RS01195 PF03923 APL_RS01195 APL_RS01200 PF01722 BolA-like protein APL_RS01210 PF04170 NlpE N-terminal domain APL_RS01215 PF05258 APL_RS01215 APL_RS01220 PF10818 APL_RS01220 APL_RS01225 PF01043 SecA preprotein cross-linking domain APL_RS01225 PF02810 SEC-C motif APL_RS01225 PF07516 SecA Wing and Scaffold domain APL_RS01225 PF07517 SecA DEAD-like domain APL_RS01230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS01235 PF00293 NUDIX domain APL_RS01240 PF01118 Semialdehyde dehydrogenase, NAD binding domain APL_RS01245 PF00696 Amino acid kinase family APL_RS01250 PF00202 Aminotransferase class-III APL_RS01255 PF01298 Transferrin binding protein-like solute binding protein APL_RS01260 PF00593 TonB dependent receptor APL_RS01260 PF07715 TonB-dependent Receptor Plug Domain APL_RS01265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APL_RS01265 PF07497 Rho termination factor, RNA-binding domain APL_RS01265 PF07498 Rho termination factor, N-terminal domain APL_RS01270 PF00291 Pyridoxal-phosphate dependent enzyme APL_RS01275 PF00288 GHMP kinases N terminal domain APL_RS01275 PF08544 GHMP kinases C terminal APL_RS01280 PF00696 Amino acid kinase family APL_RS01280 PF00742 Homoserine dehydrogenase APL_RS01280 PF01842 ACT domain APL_RS01280 PF03447 Homoserine dehydrogenase, NAD binding domain APL_RS01280 PF13840 ACT domain APL_RS01285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APL_RS01285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APL_RS01290 PF00842 Alanine racemase, C-terminal domain APL_RS01290 PF01168 Alanine racemase, N-terminal domain APL_RS01295 PF13538 UvrD-like helicase C-terminal domain APL_RS01295 PF13604 AAA domain APL_RS01320 PF01546 Peptidase family M20/M25/M40 APL_RS01320 PF07687 Peptidase dimerisation domain APL_RS01325 PF00156 Phosphoribosyl transferase domain APL_RS01330 PF00625 Guanylate kinase APL_RS01335 PF02321 Outer membrane efflux protein APL_RS01340 PF03658 RnfH family Ubiquitin APL_RS01345 PF03364 Polyketide cyclase / dehydrase and lipid transport APL_RS01350 PF00005 ABC transporter APL_RS01350 PF03459 TOBE domain APL_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS01360 PF13531 Bacterial extracellular solute-binding protein APL_RS01365 PF01061 APL_RS01365 APL_RS01370 PF00005 ABC transporter APL_RS01375 PF12169 DNA polymerase III subunits gamma and tau domain III APL_RS01375 PF12170 DNA polymerase III tau subunit V interacting with alpha APL_RS01375 PF13177 DNA polymerase III, delta subunit APL_RS01380 PF00156 Phosphoribosyl transferase domain APL_RS01385 PF08348 APL_RS01385 APL_RS01385 PF13309 APL_RS01385 APL_RS01390 PF01042 Endoribonuclease L-PSP APL_RS01395 PF00291 Pyridoxal-phosphate dependent enzyme APL_RS01400 PF04073 Aminoacyl-tRNA editing domain APL_RS01405 PF00005 ABC transporter APL_RS01410 PF01297 Periplasmic solute binding protein family APL_RS01415 PF04358 DsrC like protein APL_RS01420 PF01027 Inhibitor of apoptosis-promoting Bax1 APL_RS01425 PF01066 CDP-alcohol phosphatidyltransferase APL_RS01430 PF00593 TonB dependent receptor APL_RS01430 PF07715 TonB-dependent Receptor Plug Domain APL_RS01435 PF01541 GIY-YIG catalytic domain APL_RS01435 PF02151 UvrB/uvrC motif APL_RS01435 PF08459 UvrC Helix-hairpin-helix N-terminal APL_RS01440 PF01026 TatD related DNase APL_RS01445 PF00580 UvrD/REP helicase N-terminal domain APL_RS01445 PF13361 UvrD-like helicase C-terminal domain APL_RS01450 PF00005 ABC transporter APL_RS01450 PF08402 TOBE domain APL_RS01455 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS01465 PF01330 RuvA N terminal domain APL_RS01465 PF07499 RuvA, C-terminal domain APL_RS01465 PF14520 Helix-hairpin-helix domain APL_RS01470 PF05491 Holliday junction DNA helicase ruvB C-terminus APL_RS01470 PF05496 Holliday junction DNA helicase ruvB N-terminus APL_RS01475 PF13489 Methyltransferase domain APL_RS01480 PF00521 DNA gyrase/topoisomerase IV, subunit A APL_RS01480 PF03989 DNA gyrase C-terminal domain, beta-propeller APL_RS01490 PF02498 APL_RS01490 APL_RS01495 PF01420 Type I restriction modification DNA specificity domain APL_RS01505 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APL_RS01505 PF04851 Type III restriction enzyme, res subunit APL_RS01505 PF12008 Type I restriction and modification enzyme - subunit R C terminal APL_RS01510 PF00005 ABC transporter APL_RS01510 PF12848 ABC transporter APL_RS01510 PF16326 APL_RS01510 APL_RS01515 PF00899 ThiF family APL_RS01525 PF01654 APL_RS01525 APL_RS01530 PF02322 APL_RS01530 APL_RS01535 PF09600 APL_RS01535 APL_RS01540 PF03061 Thioesterase superfamily APL_RS01545 PF01618 APL_RS01545 APL_RS01550 PF02472 Biopolymer transport protein ExbD/TolR APL_RS01555 PF06519 TolA C-terminal APL_RS01560 PF04052 TolB amino-terminal domain APL_RS01560 PF07676 WD40-like Beta Propeller Repeat APL_RS01565 PF00691 OmpA family APL_RS01570 PF00892 EamA-like transporter family APL_RS01575 PF00226 DnaJ domain APL_RS01575 PF05099 Tellurite resistance protein TerB APL_RS01580 PF01207 Dihydrouridine synthase (Dus) APL_RS01585 PF05128 APL_RS01585 APL_RS01590 PF00005 ABC transporter APL_RS01590 PF12848 ABC transporter APL_RS01600 PF00994 Probable molybdopterin binding domain APL_RS01600 PF03453 MoeA N-terminal region (domain I and II) APL_RS01600 PF03454 MoeA C-terminal region (domain IV) APL_RS01605 PF00899 ThiF family APL_RS01615 PF01938 TRAM domain APL_RS01615 PF05958 tRNA (Uracil-5-)-methyltransferase APL_RS01620 PF01966 HD domain APL_RS01620 PF13286 Phosphohydrolase-associated domain APL_RS01625 PF00176 SNF2 family N-terminal domain APL_RS01625 PF00271 Helicase conserved C-terminal domain APL_RS01625 PF12137 RNA polymerase recycling family C-terminal APL_RS01630 PF00849 RNA pseudouridylate synthase APL_RS01635 PF01510 N-acetylmuramoyl-L-alanine amidase APL_RS01640 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ APL_RS01645 PF00156 Phosphoribosyl transferase domain APL_RS01650 PF01717 Cobalamin-independent synthase, Catalytic domain APL_RS01655 PF01053 Cys/Met metabolism PLP-dependent enzyme APL_RS01660 PF02600 Disulfide bond formation protein DsbB APL_RS01665 PF06450 APL_RS01665 APL_RS01670 PF00392 Bacterial regulatory proteins, gntR family APL_RS01670 PF07840 FadR C-terminal domain APL_RS01675 PF02562 PhoH-like protein APL_RS01680 PF03547 APL_RS01680 APL_RS01685 PF00472 RF-1 domain APL_RS01685 PF03462 PCRF domain APL_RS01690 PF00586 AIR synthase related protein, N-terminal domain APL_RS01690 PF02769 AIR synthase related protein, C-terminal domain APL_RS01695 PF00293 NUDIX domain APL_RS01700 PF01494 FAD binding domain APL_RS01720 PF01494 FAD binding domain APL_RS01725 PF03668 APL_RS01725 APL_RS01730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APL_RS01735 PF00005 ABC transporter APL_RS01735 PF12399 Branched-chain amino acid ATP-binding cassette transporter APL_RS01740 PF03968 OstA-like protein APL_RS01745 PF06835 Lipopolysaccharide-assembly, LptC-related APL_RS01750 PF00311 Phosphoenolpyruvate carboxylase APL_RS01755 PF04536 TLP18 APL_RS01760 PF04536 TLP18 APL_RS01765 PF04011 LemA family APL_RS01770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APL_RS01770 PF02378 Phosphotransferase system, EIIC APL_RS01775 PF00294 pfkB family carbohydrate kinase APL_RS01780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APL_RS01780 PF00381 PTS HPr component phosphorylation site APL_RS01785 PF00128 Alpha amylase, catalytic domain APL_RS01785 PF02806 Alpha amylase, C-terminal all-beta domain APL_RS01785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APL_RS01790 PF00128 Alpha amylase, catalytic domain APL_RS01790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APL_RS01795 PF00483 Nucleotidyl transferase APL_RS01800 PF00534 Glycosyl transferases group 1 APL_RS01800 PF08323 Starch synthase catalytic domain APL_RS01805 PF00343 Carbohydrate phosphorylase APL_RS01810 PF00334 Nucleoside diphosphate kinase APL_RS01815 PF01588 Putative tRNA binding domain APL_RS01815 PF08264 Anticodon-binding domain of tRNA APL_RS01815 PF09334 tRNA synthetases class I (M) APL_RS01820 PF13378 Enolase C-terminal domain-like APL_RS01825 PF00849 RNA pseudouridylate synthase APL_RS01825 PF01479 S4 domain APL_RS01830 PF07690 Major Facilitator Superfamily APL_RS01845 PF01261 Xylose isomerase-like TIM barrel APL_RS01850 PF00877 NlpC/P60 family APL_RS01860 PF01228 Glycine radical APL_RS01865 PF03167 Uracil DNA glycosylase superfamily APL_RS01870 PF04393 APL_RS01870 APL_RS01875 PF00082 Subtilase family APL_RS01875 PF03797 Autotransporter beta-domain APL_RS01880 PF00270 DEAD/DEAH box helicase APL_RS01880 PF00271 Helicase conserved C-terminal domain APL_RS01880 PF04408 Helicase associated domain (HA2) APL_RS01880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold APL_RS01880 PF11898 APL_RS01880 APL_RS01885 PF04284 APL_RS01885 APL_RS01890 PF01025 GrpE APL_RS01895 PF13416 Bacterial extracellular solute-binding protein APL_RS01900 PF01554 MatE APL_RS01905 PF00580 UvrD/REP helicase N-terminal domain APL_RS01905 PF12705 PD-(D/E)XK nuclease superfamily APL_RS01905 PF13361 UvrD-like helicase C-terminal domain APL_RS01910 PF00795 Carbon-nitrogen hydrolase APL_RS01915 PF00571 CBS domain APL_RS01915 PF03471 Transporter associated domain APL_RS01920 PF09829 APL_RS01920 APL_RS01925 PF00230 Major intrinsic protein APL_RS01930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APL_RS01930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APL_RS01935 PF00004 ATPase family associated with various cellular activities (AAA) APL_RS01935 PF02190 ATP-dependent protease La (LON) domain APL_RS01935 PF05362 Lon protease (S16) C-terminal proteolytic domain APL_RS01940 PF07690 Major Facilitator Superfamily APL_RS01945 PF03009 Glycerophosphoryl diester phosphodiesterase family APL_RS01950 PF01266 FAD dependent oxidoreductase APL_RS01950 PF04324 BFD-like [2Fe-2S] binding domain APL_RS01950 PF16901 APL_RS01950 APL_RS01955 PF00890 FAD binding domain APL_RS01960 PF02754 APL_RS01960 APL_RS01960 PF13183 4Fe-4S dicluster domain APL_RS01965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APL_RS01965 PF01872 RibD C-terminal domain APL_RS01970 PF00677 Lumazine binding domain APL_RS01975 PF00925 GTP cyclohydrolase II APL_RS01975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APL_RS01980 PF00885 6,7-dimethyl-8-ribityllumazine synthase APL_RS01985 PF01272 Transcription elongation factor, GreA/GreB, C-term APL_RS01985 PF03449 Transcription elongation factor, N-terminal APL_RS01990 PF00571 CBS domain APL_RS01990 PF01380 SIS domain APL_RS01995 PF00883 Cytosol aminopeptidase family, catalytic domain APL_RS01995 PF12404 APL_RS01995 APL_RS02000 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) APL_RS02005 PF01758 Sodium Bile acid symporter family APL_RS02010 PF16576 APL_RS02010 APL_RS02015 PF08282 haloacid dehalogenase-like hydrolase APL_RS02020 PF00682 HMGL-like APL_RS02020 PF08502 LeuA allosteric (dimerisation) domain APL_RS02025 PF04542 Sigma-70 region 2 APL_RS02025 PF08281 Sigma-70, region 4 APL_RS02030 PF03872 Anti sigma-E protein RseA, N-terminal domain APL_RS02030 PF03873 Anti sigma-E protein RseA, C-terminal domain APL_RS02035 PF04246 APL_RS02035 APL_RS02040 PF00501 AMP-binding enzyme APL_RS02040 PF13193 AMP-binding enzyme C-terminal domain APL_RS02045 PF14681 Uracil phosphoribosyltransferase APL_RS02050 PF00398 Ribosomal RNA adenine dimethylase APL_RS02055 PF00639 PPIC-type PPIASE domain APL_RS02055 PF09312 SurA N-terminal domain APL_RS02060 PF00156 Phosphoribosyl transferase domain APL_RS02065 PF00294 pfkB family carbohydrate kinase APL_RS02065 PF01467 Cytidylyltransferase APL_RS02070 PF01926 50S ribosome-binding GTPase APL_RS02070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APL_RS02075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APL_RS02075 PF01488 Shikimate / quinate 5-dehydrogenase APL_RS02075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APL_RS02080 PF02824 TGS domain APL_RS02080 PF04607 Region found in RelA / SpoT proteins APL_RS02080 PF13291 ACT domain APL_RS02080 PF13328 HD domain APL_RS02085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APL_RS02085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal APL_RS02085 PF13288 DXP reductoisomerase C-terminal domain APL_RS02090 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS02090 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APL_RS02095 PF07977 FabA-like domain APL_RS02100 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS02100 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APL_RS02105 PF03938 Outer membrane protein (OmpH-like) APL_RS02110 PF01103 Surface antigen APL_RS02110 PF07244 Surface antigen variable number repeat APL_RS02115 PF00595 PDZ domain (Also known as DHR or GLGF) APL_RS02115 PF02163 Peptidase family M50 APL_RS02120 PF01148 Cytidylyltransferase family APL_RS02125 PF01255 Putative undecaprenyl diphosphate synthase APL_RS02130 PF00753 Metallo-beta-lactamase superfamily APL_RS02130 PF16123 APL_RS02130 APL_RS02135 PF00480 ROK family APL_RS02140 PF01569 PAP2 superfamily APL_RS02145 PF01985 CRS1 / YhbY (CRM) domain APL_RS02150 PF00535 Glycosyl transferase family 2 APL_RS02160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS02165 PF00764 Arginosuccinate synthase APL_RS02170 PF00075 RNase H APL_RS02175 PF02674 APL_RS02175 APL_RS02180 PF00156 Phosphoribosyl transferase domain APL_RS02180 PF13522 Glutamine amidotransferase domain APL_RS02190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APL_RS02190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APL_RS02195 PF04355 SmpA / OmlA family APL_RS02200 PF04245 APL_RS02200 APL_RS02205 PF01042 Endoribonuclease L-PSP APL_RS02210 PF02578 Multi-copper polyphenol oxidoreductase laccase APL_RS02220 PF07119 APL_RS02220 APL_RS02225 PF00180 Isocitrate/isopropylmalate dehydrogenase APL_RS02230 PF01641 SelR domain APL_RS02235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APL_RS02235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APL_RS02240 PF06723 MreB/Mbl protein APL_RS02245 PF04085 rod shape-determining protein MreC APL_RS02250 PF04093 APL_RS02250 APL_RS02255 PF05496 Holliday junction DNA helicase ruvB N-terminus APL_RS02255 PF12002 MgsA AAA+ ATPase C terminal APL_RS02255 PF16193 APL_RS02255 APL_RS02260 PF00950 APL_RS02260 APL_RS02265 PF13230 Glutamine amidotransferases class-II APL_RS02270 PF00561 alpha/beta hydrolase fold APL_RS02275 PF02698 DUF218 domain APL_RS02285 PF02589 Uncharacterised ACR, YkgG family COG1556 APL_RS02290 PF02589 Uncharacterised ACR, YkgG family COG1556 APL_RS02290 PF11870 APL_RS02290 APL_RS02290 PF13183 4Fe-4S dicluster domain APL_RS02295 PF02754 APL_RS02295 APL_RS02300 PF02652 APL_RS02300 APL_RS02305 PF00816 H-NS histone family APL_RS02310 PF03553 APL_RS02310 APL_RS02315 PF13407 Periplasmic binding protein domain APL_RS02320 PF00549 CoA-ligase APL_RS02320 PF02629 CoA binding domain APL_RS02325 PF00549 CoA-ligase APL_RS02325 PF08442 ATP-grasp domain APL_RS02330 PF04393 APL_RS02330 APL_RS02335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APL_RS02335 PF00364 Biotin-requiring enzyme APL_RS02335 PF02817 e3 binding domain APL_RS02340 PF00676 Dehydrogenase E1 component APL_RS02340 PF02779 Transketolase, pyrimidine binding domain APL_RS02340 PF16078 APL_RS02340 APL_RS02340 PF16870 APL_RS02340 APL_RS02345 PF00005 ABC transporter APL_RS02350 PF01551 Peptidase family M23 APL_RS02355 PF10411 Disulfide bond isomerase protein N-terminus APL_RS02355 PF13098 Thioredoxin-like domain APL_RS02360 PF01368 DHH family APL_RS02360 PF02272 DHHA1 domain APL_RS02365 PF00691 OmpA family APL_RS02365 PF04355 SmpA / OmlA family APL_RS02370 PF08282 haloacid dehalogenase-like hydrolase APL_RS02375 PF00672 HAMP domain APL_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS02375 PF07730 Histidine kinase APL_RS02375 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APL_RS02380 PF13420 Acetyltransferase (GNAT) domain APL_RS02385 PF01725 Ham1 family APL_RS02390 PF01906 Putative heavy-metal-binding APL_RS02395 PF01268 Formate--tetrahydrofolate ligase APL_RS02400 PF03692 APL_RS02400 APL_RS02405 PF00106 short chain dehydrogenase APL_RS02410 PF00291 Pyridoxal-phosphate dependent enzyme APL_RS02415 PF00290 Tryptophan synthase alpha chain APL_RS02430 PF00476 DNA polymerase family A APL_RS02430 PF01367 5'-3' exonuclease, C-terminal SAM fold APL_RS02430 PF01612 3'-5' exonuclease APL_RS02430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APL_RS02435 PF05016 Plasmid stabilisation system protein APL_RS02440 PF03548 Outer membrane lipoprotein carrier protein LolA APL_RS02445 PF01371 Trp repressor protein APL_RS02450 PF00912 Transglycosylase APL_RS02455 PF02627 Carboxymuconolactone decarboxylase family APL_RS02460 PF03595 Voltage-dependent anion channel APL_RS02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase APL_RS02475 PF11127 Protein of unknown function (DUF2892) APL_RS02480 PF01022 Bacterial regulatory protein, arsR family APL_RS02485 PF00881 Nitroreductase family APL_RS02490 PF08443 RimK-like ATP-grasp domain APL_RS02495 PF02698 DUF218 domain APL_RS02500 PF00390 Malic enzyme, N-terminal domain APL_RS02500 PF03949 Malic enzyme, NAD binding domain APL_RS02505 PF01386 Ribosomal L25p family APL_RS02510 PF00589 Phage integrase family APL_RS02510 PF09003 Bacteriophage lambda integrase, N-terminal domain APL_RS02515 PF13986 APL_RS02515 APL_RS02530 PF03819 MazG nucleotide pyrophosphohydrolase domain APL_RS02545 PF04381 Putative exonuclease, RdgC APL_RS02580 PF02086 D12 class N6 adenine-specific DNA methyltransferase APL_RS02585 PF13304 AAA domain APL_RS02590 PF00717 Peptidase S24-like APL_RS02590 PF01381 Helix-turn-helix APL_RS02595 PF14549 DNA-binding transcriptional regulator Cro APL_RS02600 PF03374 APL_RS02600 APL_RS02600 PF09669 APL_RS02600 APL_RS02610 PF09524 APL_RS02610 APL_RS02615 PF05869 APL_RS02615 APL_RS02620 PF06147 APL_RS02620 APL_RS02625 PF05866 Endodeoxyribonuclease RusA APL_RS02640 PF00959 Phage lysozyme APL_RS02645 PF10828 APL_RS02645 APL_RS02650 PF07278 APL_RS02650 APL_RS02655 PF05876 APL_RS02655 APL_RS02665 PF05136 APL_RS02665 APL_RS02670 PF00574 Clp protease APL_RS02670 PF10124 APL_RS02670 APL_RS02675 PF09956 APL_RS02675 APL_RS02680 PF13856 ATP-binding sugar transporter from pro-phage APL_RS02685 PF06763 APL_RS02685 APL_RS02690 PF06141 Phage minor tail protein U APL_RS02705 PF13227 APL_RS02705 APL_RS02715 PF06120 APL_RS02715 APL_RS02720 PF05939 APL_RS02720 APL_RS02735 PF10547 APL_RS02735 APL_RS02740 PF05100 APL_RS02740 APL_RS02745 PF00877 NlpC/P60 family APL_RS02745 PF14464 Prokaryotic homologs of the JAB domain APL_RS02760 PF09327 APL_RS02760 APL_RS02760 PF13550 APL_RS02760 APL_RS02775 PF06226 APL_RS02775 APL_RS02780 PF03824 APL_RS02780 APL_RS02785 PF01235 APL_RS02785 APL_RS02795 PF00005 ABC transporter APL_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS02805 PF00899 ThiF family APL_RS02810 PF00899 ThiF family APL_RS02815 PF02597 ThiS family APL_RS02825 PF04055 Radical SAM superfamily APL_RS02825 PF06968 Biotin and Thiamin Synthesis associated domain APL_RS02830 PF03070 TENA/THI-4/PQQC family APL_RS02835 PF09084 NMT1/THI5 like APL_RS02840 PF08543 Phosphomethylpyrimidine kinase APL_RS02845 PF02581 Thiamine monophosphate synthase/TENI APL_RS02850 PF00009 Elongation factor Tu GTP binding domain APL_RS02850 PF00679 Elongation factor G C-terminus APL_RS02850 PF03144 Elongation factor Tu domain 2 APL_RS02850 PF06421 GTP-binding protein LepA C-terminus APL_RS02855 PF00717 Peptidase S24-like APL_RS02855 PF10502 Signal peptidase, peptidase S26 APL_RS02860 PF00035 Double-stranded RNA binding motif APL_RS02860 PF14622 Ribonuclease-III-like APL_RS02865 PF01926 50S ribosome-binding GTPase APL_RS02865 PF07650 KH domain APL_RS02870 PF02565 Recombination protein O C terminal APL_RS02870 PF11967 Recombination protein O N terminal APL_RS02880 PF16964 APL_RS02880 APL_RS02885 PF07811 APL_RS02885 APL_RS02895 PF00482 Type II secretion system (T2SS), protein F APL_RS02900 PF00482 Type II secretion system (T2SS), protein F APL_RS02905 PF00437 Type II/IV secretion system protein APL_RS02910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APL_RS02915 PF16971 APL_RS02915 APL_RS02920 PF00263 APL_RS02920 APL_RS02920 PF13629 APL_RS02920 APL_RS02925 PF08666 SAF domain APL_RS02930 PF01478 Type IV leader peptidase family APL_RS02935 PF04964 APL_RS02935 APL_RS02940 PF04964 APL_RS02940 APL_RS02945 PF00270 DEAD/DEAH box helicase APL_RS02945 PF00271 Helicase conserved C-terminal domain APL_RS02955 PF05872 APL_RS02955 APL_RS02960 PF13343 Bacterial extracellular solute-binding protein APL_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS02970 PF00593 TonB dependent receptor APL_RS02970 PF07715 TonB-dependent Receptor Plug Domain APL_RS02975 PF00318 Ribosomal protein S2 APL_RS02980 PF00889 Elongation factor TS APL_RS02985 PF00884 Sulfatase APL_RS02990 PF00696 Amino acid kinase family APL_RS02995 PF01765 Ribosome recycling factor APL_RS03000 PF00155 Aminotransferase class I and II APL_RS03000 PF00392 Bacterial regulatory proteins, gntR family APL_RS03005 PF01680 SOR/SNZ family APL_RS03010 PF01174 SNO glutamine amidotransferase family APL_RS03015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APL_RS03020 PF00270 DEAD/DEAH box helicase APL_RS03020 PF00271 Helicase conserved C-terminal domain APL_RS03020 PF03880 DbpA RNA binding domain APL_RS03025 PF07719 Tetratricopeptide repeat APL_RS03030 PF00013 KH domain APL_RS03030 PF00575 S1 RNA binding domain APL_RS03030 PF01138 3' exoribonuclease family, domain 1 APL_RS03030 PF03725 3' exoribonuclease family, domain 2 APL_RS03030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APL_RS03035 PF00521 DNA gyrase/topoisomerase IV, subunit A APL_RS03035 PF03989 DNA gyrase C-terminal domain, beta-propeller APL_RS03040 PF03882 KicB killing factor APL_RS03040 PF17192 APL_RS03040 APL_RS03040 PF17193 APL_RS03040 APL_RS03045 PF04288 MukE-like family APL_RS03050 PF04310 MukB N-terminal APL_RS03050 PF13558 Putative exonuclease SbcCD, C subunit APL_RS03050 PF16330 APL_RS03050 APL_RS03055 PF07690 Major Facilitator Superfamily APL_RS03060 PF00884 Sulfatase APL_RS03060 PF11893 APL_RS03060 APL_RS03065 PF07208 Protein of unknown function (DUF1414) APL_RS03070 PF00440 Bacterial regulatory proteins, tetR family APL_RS03075 PF00529 HlyD family secretion protein APL_RS03075 PF16576 APL_RS03075 APL_RS03080 PF00873 AcrB/AcrD/AcrF family APL_RS03085 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS03085 PF12804 MobA-like NTP transferase domain APL_RS03090 PF05495 CHY zinc finger APL_RS03095 PF08942 Domain of unknown function (DUF1919) APL_RS03100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APL_RS03100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APL_RS03100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APL_RS03100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APL_RS03105 PF00117 Glutamine amidotransferase class-I APL_RS03105 PF00958 GMP synthase C terminal domain APL_RS03105 PF02540 NAD synthase APL_RS03115 PF00478 IMP dehydrogenase / GMP reductase domain APL_RS03115 PF00571 CBS domain APL_RS03120 PF01728 FtsJ-like methyltransferase APL_RS03125 PF00004 ATPase family associated with various cellular activities (AAA) APL_RS03125 PF01434 Peptidase family M41 APL_RS03125 PF06480 FtsH Extracellular APL_RS03130 PF03222 Tryptophan/tyrosine permease family APL_RS03135 PF03222 Tryptophan/tyrosine permease family APL_RS03140 PF01909 Nucleotidyltransferase domain APL_RS03140 PF01966 HD domain APL_RS03140 PF08335 GlnD PII-uridylyltransferase APL_RS03145 PF06295 APL_RS03145 APL_RS03150 PF00572 Ribosomal protein L13 APL_RS03155 PF00380 Ribosomal protein S9/S16 APL_RS03160 PF03883 APL_RS03160 APL_RS03170 PF01545 Cation efflux family APL_RS03170 PF16916 APL_RS03170 APL_RS03175 PF10071 APL_RS03175 APL_RS03180 PF00375 Sodium:dicarboxylate symporter family APL_RS03185 PF00881 Nitroreductase family APL_RS03190 PF01409 tRNA synthetases class II core domain (F) APL_RS03190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APL_RS03195 PF01588 Putative tRNA binding domain APL_RS03195 PF03147 Ferredoxin-fold anticodon binding domain APL_RS03195 PF03483 B3/4 domain APL_RS03195 PF03484 tRNA synthetase B5 domain APL_RS03200 PF00216 Bacterial DNA-binding protein APL_RS03205 PF00877 NlpC/P60 family APL_RS03210 PF00665 Integrase core domain APL_RS03210 PF13276 APL_RS03210 APL_RS03215 PF13518 Helix-turn-helix domain APL_RS03220 PF13500 AAA domain APL_RS03230 PF00570 HRDC domain APL_RS03230 PF01612 3'-5' exonuclease APL_RS03235 PF01037 AsnC family APL_RS03235 PF13412 Winged helix-turn-helix DNA-binding APL_RS03240 PF01580 FtsK/SpoIIIE family APL_RS03240 PF09397 Ftsk gamma domain APL_RS03240 PF13491 APL_RS03240 APL_RS03245 PF04228 APL_RS03245 APL_RS03250 PF00793 DAHP synthetase I family APL_RS03255 PF00814 Glycoprotease family APL_RS03260 PF00265 Thymidine kinase APL_RS03265 PF06005 Protein of unknown function (DUF904) APL_RS03270 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APL_RS03275 PF01784 NIF3 (NGG1p interacting factor 3) APL_RS03280 PF00005 ABC transporter APL_RS03280 PF02687 APL_RS03280 APL_RS03280 PF12704 MacB-like periplasmic core domain APL_RS03290 PF00072 Response regulator receiver domain APL_RS03290 PF00486 Transcriptional regulatory protein, C terminal APL_RS03300 PF01039 Carboxyl transferase domain APL_RS03305 PF08245 Mur ligase middle domain APL_RS03310 PF02384 N-6 DNA Methylase APL_RS03310 PF12161 HsdM N-terminal domain APL_RS03315 PF01420 Type I restriction modification DNA specificity domain APL_RS03320 PF14355 APL_RS03320 APL_RS03325 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APL_RS03325 PF04851 Type III restriction enzyme, res subunit APL_RS03325 PF11867 APL_RS03325 APL_RS03335 PF02576 Uncharacterised BCR, YhbC family COG0779 APL_RS03340 PF08529 NusA N-terminal domain APL_RS03340 PF13184 NusA-like KH domain APL_RS03340 PF14520 Helix-hairpin-helix domain APL_RS03345 PF00009 Elongation factor Tu GTP binding domain APL_RS03345 PF04760 Translation initiation factor IF-2, N-terminal region APL_RS03345 PF11987 Translation-initiation factor 2 APL_RS03350 PF02033 Ribosome-binding factor A APL_RS03355 PF01509 TruB family pseudouridylate synthase (N terminal domain) APL_RS03355 PF09157 Pseudouridine synthase II TruB, C-terminal APL_RS03355 PF16198 APL_RS03355 APL_RS03360 PF13406 Transglycosylase SLT domain APL_RS03365 PF07411 Domain of unknown function (DUF1508) APL_RS03370 PF01515 Phosphate acetyl/butaryl transferase APL_RS03370 PF07085 DRTGG domain APL_RS03370 PF13500 AAA domain APL_RS03375 PF00871 Acetokinase family APL_RS03380 PF00149 Calcineurin-like phosphoesterase APL_RS03380 PF02872 5'-nucleotidase, C-terminal domain APL_RS03385 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APL_RS03390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APL_RS03395 PF13609 Gram-negative porin APL_RS03400 PF07445 Primosomal replication protein priB and priC APL_RS03405 PF00483 Nucleotidyl transferase APL_RS03410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APL_RS03410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APL_RS03410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APL_RS03410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APL_RS03415 PF02599 Global regulator protein family APL_RS03420 PF01411 tRNA synthetases class II (A) APL_RS03420 PF02272 DHHA1 domain APL_RS03420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APL_RS03425 PF00582 Universal stress protein family APL_RS03430 PF00027 Cyclic nucleotide-binding domain APL_RS03430 PF13545 Crp-like helix-turn-helix domain APL_RS03435 PF04386 Stringent starvation protein B APL_RS03440 PF00043 Glutathione S-transferase, C-terminal domain APL_RS03440 PF02798 Glutathione S-transferase, N-terminal domain APL_RS03445 PF00731 AIR carboxylase APL_RS03450 PF00710 Asparaginase APL_RS03455 PF02222 ATP-grasp domain APL_RS03460 PF00155 Aminotransferase class I and II APL_RS03465 PF00557 Metallopeptidase family M24 APL_RS03465 PF05195 Aminopeptidase P, N-terminal domain APL_RS03470 PF13173 AAA domain APL_RS03470 PF13635 APL_RS03470 APL_RS03475 PF01850 PIN domain APL_RS03485 PF00271 Helicase conserved C-terminal domain APL_RS03485 PF02151 UvrB/uvrC motif APL_RS03485 PF04851 Type III restriction enzyme, res subunit APL_RS03485 PF12344 Ultra-violet resistance protein B APL_RS03490 PF09375 Imelysin APL_RS03495 PF04261 Dyp-type peroxidase family APL_RS03505 PF02811 PHP domain APL_RS03515 PF00929 Exonuclease APL_RS03515 PF08411 Exonuclease C-terminal APL_RS03520 PF00654 Voltage gated chloride channel APL_RS03525 PF00152 tRNA synthetases class II (D, K and N) APL_RS03525 PF01336 OB-fold nucleic acid binding domain APL_RS03530 PF04055 Radical SAM superfamily APL_RS03530 PF13394 4Fe-4S single cluster domain APL_RS03540 PF01132 Elongation factor P (EF-P) OB domain APL_RS03540 PF08207 Elongation factor P (EF-P) KOW-like domain APL_RS03540 PF09285 Elongation factor P, C-terminal APL_RS03545 PF00749 tRNA synthetases class I (E and Q), catalytic domain APL_RS03545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APL_RS03550 PF07690 Major Facilitator Superfamily APL_RS03555 PF01464 Transglycosylase SLT domain APL_RS03555 PF14718 Soluble lytic murein transglycosylase L domain APL_RS03560 PF00156 Phosphoribosyl transferase domain APL_RS03565 PF01053 Cys/Met metabolism PLP-dependent enzyme APL_RS03570 PF01113 Dihydrodipicolinate reductase, N-terminus APL_RS03570 PF05173 Dihydrodipicolinate reductase, C-terminus APL_RS03575 PF01728 FtsJ-like methyltransferase APL_RS03580 PF04241 APL_RS03580 APL_RS03585 PF01565 FAD binding domain APL_RS03585 PF09330 D-lactate dehydrogenase, membrane binding APL_RS03590 PF00384 Molybdopterin oxidoreductase APL_RS03590 PF01568 Molydopterin dinucleotide binding domain APL_RS03595 PF03264 NapC/NirT cytochrome c family, N-terminal region APL_RS03600 PF04055 Radical SAM superfamily APL_RS03600 PF06463 Molybdenum Cofactor Synthesis C APL_RS03600 PF13353 4Fe-4S single cluster domain APL_RS03605 PF01967 MoaC family APL_RS03610 PF02597 ThiS family APL_RS03615 PF02391 MoaE protein APL_RS03620 PF02130 Uncharacterized protein family UPF0054 APL_RS03625 PF05127 Helicase APL_RS03625 PF13718 GNAT acetyltransferase 2 APL_RS03625 PF17176 APL_RS03625 APL_RS03630 PF01131 DNA topoisomerase APL_RS03630 PF01396 APL_RS03630 APL_RS03630 PF01751 Toprim domain APL_RS03630 PF08272 Topoisomerase I zinc-ribbon-like APL_RS03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS03635 PF03466 LysR substrate binding domain APL_RS03640 PF00583 Acetyltransferase (GNAT) family APL_RS03640 PF00696 Amino acid kinase family APL_RS03645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APL_RS03650 PF00155 Aminotransferase class I and II APL_RS03655 PF01053 Cys/Met metabolism PLP-dependent enzyme APL_RS03660 PF00266 Aminotransferase class-V APL_RS03665 PF00176 SNF2 family N-terminal domain APL_RS03665 PF00271 Helicase conserved C-terminal domain APL_RS03670 PF04851 Type III restriction enzyme, res subunit APL_RS03675 PF01555 DNA methylase APL_RS03680 PF01380 SIS domain APL_RS03680 PF01418 Helix-turn-helix domain, rpiR family APL_RS03685 PF04074 Domain of unknown function (DUF386) APL_RS03690 PF02541 Ppx/GppA phosphatase family APL_RS03695 PF04363 APL_RS03695 APL_RS03700 PF00696 Amino acid kinase family APL_RS03705 PF03477 ATP cone domain APL_RS03710 PF05166 YcgL domain APL_RS03715 PF00772 DnaB-like helicase N terminal domain APL_RS03715 PF03796 DnaB-like helicase C terminal domain APL_RS03720 PF01497 Periplasmic binding protein APL_RS03725 PF01032 FecCD transport family APL_RS03730 PF01032 FecCD transport family APL_RS03735 PF00005 ABC transporter APL_RS03740 PF01865 Protein of unknown function DUF47 APL_RS03745 PF01384 APL_RS03745 APL_RS03750 PF08239 Bacterial SH3 domain APL_RS03755 PF01206 Sulfurtransferase TusA APL_RS03760 PF01814 Hemerythrin HHE cation binding domain APL_RS03765 PF01702 Queuine tRNA-ribosyltransferase APL_RS03770 PF07273 Protein of unknown function (DUF1439) APL_RS03775 PF00313 'Cold-shock' DNA-binding domain APL_RS03780 PF00484 Carbonic anhydrase APL_RS03785 PF00205 Thiamine pyrophosphate enzyme, central domain APL_RS03785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APL_RS03785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APL_RS03790 PF10369 Small subunit of acetolactate synthase APL_RS03790 PF13710 ACT domain APL_RS03795 PF01523 Putative modulator of DNA gyrase APL_RS03800 PF04751 Protein of unknown function (DUF615) APL_RS03805 PF04247 APL_RS03805 APL_RS03810 PF02441 Flavoprotein APL_RS03815 PF04474 APL_RS03815 APL_RS03825 PF01253 Translation initiation factor SUI1 APL_RS03830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APL_RS03835 PF14559 Tetratricopeptide repeat APL_RS03840 PF06305 APL_RS03840 APL_RS03845 PF00216 Bacterial DNA-binding protein APL_RS03850 PF00575 S1 RNA binding domain APL_RS03855 PF02224 Cytidylate kinase APL_RS03860 PF13180 PDZ domain APL_RS03860 PF13365 Trypsin-like peptidase domain APL_RS03870 PF03840 Preprotein translocase SecG subunit APL_RS03875 PF01131 DNA topoisomerase APL_RS03875 PF01751 Toprim domain APL_RS03885 PF03411 Penicillin-insensitive murein endopeptidase APL_RS03890 PF01264 Chorismate synthase APL_RS03895 PF00924 Mechanosensitive ion channel APL_RS03895 PF12794 APL_RS03895 APL_RS03895 PF12795 APL_RS03895 APL_RS03900 PF00924 Mechanosensitive ion channel APL_RS03900 PF12794 APL_RS03900 APL_RS03900 PF12795 APL_RS03900 APL_RS03905 PF00501 AMP-binding enzyme APL_RS03910 PF03925 SeqA protein APL_RS03915 PF12697 Alpha/beta hydrolase family APL_RS03920 PF13649 Methyltransferase domain APL_RS03925 PF13561 Enoyl-(Acyl carrier protein) reductase APL_RS03930 PF04365 Protein of unknown function (DUF497) APL_RS03935 PF14384 APL_RS03935 APL_RS03940 PF00575 S1 RNA binding domain APL_RS03940 PF00773 RNB domain APL_RS03940 PF08206 Ribonuclease B OB domain APL_RS03945 PF03788 APL_RS03945 APL_RS03950 PF04172 APL_RS03950 APL_RS03955 PF00149 Calcineurin-like phosphoesterase APL_RS03965 PF03889 APL_RS03965 APL_RS03970 PF13649 Methyltransferase domain APL_RS03975 PF01594 APL_RS03975 APL_RS03980 PF01933 Uncharacterised protein family UPF0052 APL_RS03985 PF02547 Queuosine biosynthesis protein APL_RS03990 PF00753 Metallo-beta-lactamase superfamily APL_RS03990 PF03772 APL_RS03990 APL_RS03990 PF13567 APL_RS03990 APL_RS03995 PF00375 Sodium:dicarboxylate symporter family APL_RS04000 PF01219 Prokaryotic diacylglycerol kinase APL_RS04005 PF00149 Calcineurin-like phosphoesterase APL_RS04005 PF02872 5'-nucleotidase, C-terminal domain APL_RS04010 PF00872 APL_RS04010 APL_RS04015 PF14131 Domain of unknown function (DUF4298) APL_RS04035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APL_RS04035 PF07992 Pyridine nucleotide-disulphide oxidoreductase APL_RS04040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APL_RS04040 PF00364 Biotin-requiring enzyme APL_RS04040 PF02817 e3 binding domain APL_RS04045 PF00456 Transketolase, thiamine diphosphate binding domain APL_RS04050 PF01180 Dihydroorotate dehydrogenase APL_RS04055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APL_RS04055 PF14572 Phosphoribosyl synthetase-associated domain APL_RS04060 PF00288 GHMP kinases N terminal domain APL_RS04060 PF08544 GHMP kinases C terminal APL_RS04065 PF03550 Outer membrane lipoprotein LolB APL_RS04070 PF00005 ABC transporter APL_RS04070 PF00664 ABC transporter transmembrane region APL_RS04075 PF04172 APL_RS04075 APL_RS04080 PF03788 APL_RS04080 APL_RS04085 PF00270 DEAD/DEAH box helicase APL_RS04085 PF13307 Helicase C-terminal domain APL_RS04095 PF00005 ABC transporter APL_RS04100 PF00436 Single-strand binding protein family APL_RS04110 PF12532 APL_RS04110 APL_RS04110 PF13476 AAA domain APL_RS04125 PF13173 AAA domain APL_RS04125 PF13635 APL_RS04125 APL_RS04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS04130 PF03466 LysR substrate binding domain APL_RS04135 PF03060 Nitronate monooxygenase APL_RS04150 PF04237 YjbR APL_RS04155 PF00005 ABC transporter APL_RS04155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APL_RS04160 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS04160 PF12911 APL_RS04160 APL_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS04170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS04175 PF00158 Sigma-54 interaction domain APL_RS04180 PF13580 SIS domain APL_RS04185 PF00872 APL_RS04185 APL_RS04190 PF01293 Phosphoenolpyruvate carboxykinase APL_RS04195 PF04977 Septum formation initiator APL_RS04200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APL_RS04205 PF02542 YgbB family APL_RS04210 PF00884 Sulfatase APL_RS04215 PF03473 MOSC domain APL_RS04215 PF03476 MOSC N-terminal beta barrel domain APL_RS04220 PF02609 Exonuclease VII small subunit APL_RS04225 PF00348 Polyprenyl synthetase APL_RS04230 PF04342 APL_RS04230 APL_RS04235 PF00152 tRNA synthetases class II (D, K and N) APL_RS04235 PF01336 OB-fold nucleic acid binding domain APL_RS04240 PF00575 S1 RNA binding domain APL_RS04240 PF10150 Ribonuclease E/G family APL_RS04245 PF02624 YcaO-like family APL_RS04250 PF04851 Type III restriction enzyme, res subunit APL_RS04255 PF01555 DNA methylase APL_RS04260 PF08003 Protein of unknown function (DUF1698) APL_RS04270 PF03562 MltA specific insert domain APL_RS04270 PF06725 3D domain APL_RS04280 PF02601 APL_RS04280 APL_RS04280 PF13742 APL_RS04280 APL_RS04290 PF00576 HIUase/Transthyretin family APL_RS04295 PF00356 Bacterial regulatory proteins, lacI family APL_RS04295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APL_RS04300 PF09335 APL_RS04300 APL_RS04305 PF00204 DNA gyrase B APL_RS04305 PF00986 DNA gyrase B subunit, carboxyl terminus APL_RS04305 PF01751 Toprim domain APL_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS04310 PF01040 UbiA prenyltransferase family APL_RS04315 PF00455 APL_RS04315 APL_RS04315 PF08220 DeoR-like helix-turn-helix domain APL_RS04320 PF00206 Lyase APL_RS04320 PF08328 Adenylosuccinate lyase C-terminal APL_RS04325 PF04356 Protein of unknown function (DUF489) APL_RS04330 PF00005 ABC transporter APL_RS04330 PF00664 ABC transporter transmembrane region APL_RS04335 PF00005 ABC transporter APL_RS04335 PF00664 ABC transporter transmembrane region APL_RS04340 PF04357 APL_RS04340 APL_RS04345 PF01103 Surface antigen APL_RS04345 PF07244 Surface antigen variable number repeat APL_RS04350 PF04748 Divergent polysaccharide deacetylase APL_RS04355 PF01551 Peptidase family M23 APL_RS04360 PF00300 Histidine phosphatase superfamily (branch 1) APL_RS04365 PF01810 APL_RS04365 APL_RS04370 PF00485 Phosphoribulokinase / Uridine kinase family APL_RS04375 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) APL_RS04380 PF00440 Bacterial regulatory proteins, tetR family APL_RS04385 PF13437 HlyD family secretion protein APL_RS04385 PF13533 Biotin-lipoyl like APL_RS04390 PF00005 ABC transporter APL_RS04390 PF12698 ABC-2 family transporter protein APL_RS04395 PF12698 ABC-2 family transporter protein APL_RS04400 PF02321 Outer membrane efflux protein APL_RS04405 PF02233 NAD(P) transhydrogenase beta subunit APL_RS04410 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APL_RS04410 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APL_RS04410 PF12769 Domain of unknown function (DUF3814) APL_RS04415 PF00588 SpoU rRNA Methylase family APL_RS04420 PF14489 QueF-like protein APL_RS04420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term APL_RS04425 PF13242 HAD-hyrolase-like APL_RS04430 PF00578 AhpC/TSA family APL_RS04435 PF04055 Radical SAM superfamily APL_RS04435 PF06969 HemN C-terminal domain APL_RS04440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS04450 PF00005 ABC transporter APL_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS04450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APL_RS04455 PF00005 ABC transporter APL_RS04460 PF00890 FAD binding domain APL_RS04465 PF01717 Cobalamin-independent synthase, Catalytic domain APL_RS04470 PF02219 Methylenetetrahydrofolate reductase APL_RS04475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS04480 PF03222 Tryptophan/tyrosine permease family APL_RS04485 PF03313 APL_RS04485 APL_RS04485 PF03315 Serine dehydratase beta chain APL_RS04490 PF01266 FAD dependent oxidoreductase APL_RS04490 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04495 PF00218 Indole-3-glycerol phosphate synthase APL_RS04495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APL_RS04500 PF02661 Fic/DOC family APL_RS04505 PF04287 tRNA pseudouridine synthase C APL_RS04510 PF00849 RNA pseudouridylate synthase APL_RS04520 PF01928 CYTH domain APL_RS04525 PF04317 APL_RS04525 APL_RS04530 PF01668 SmpB protein APL_RS04535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APL_RS04535 PF02403 Seryl-tRNA synthetase N-terminal domain APL_RS04540 PF01546 Peptidase family M20/M25/M40 APL_RS04540 PF07687 Peptidase dimerisation domain APL_RS04545 PF03606 APL_RS04545 APL_RS04550 PF03575 Peptidase family S51 APL_RS04555 PF00133 tRNA synthetases class I (I, L, M and V) APL_RS04555 PF08264 Anticodon-binding domain of tRNA APL_RS04555 PF13603 Leucyl-tRNA synthetase, Domain 2 APL_RS04560 PF04390 Lipopolysaccharide-assembly APL_RS04565 PF06144 DNA polymerase III, delta subunit APL_RS04565 PF14840 Processivity clamp loader gamma complex DNA pol III C-term APL_RS04570 PF03884 Domain of unknown function (DUF329) APL_RS04575 PF01121 Dephospho-CoA kinase APL_RS04580 PF01478 Type IV leader peptidase family APL_RS04585 PF00482 Type II secretion system (T2SS), protein F APL_RS04590 PF00437 Type II/IV secretion system protein APL_RS04590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APL_RS04595 PF13633 Prokaryotic N-terminal methylation site APL_RS04600 PF13481 AAA domain APL_RS04600 PF13541 Subunit ChlI of Mg-chelatase APL_RS04605 PF10688 APL_RS04605 APL_RS04610 PF00186 Dihydrofolate reductase APL_RS04615 PF00696 Amino acid kinase family APL_RS04615 PF01472 PUA domain APL_RS04620 PF01925 APL_RS04620 APL_RS04625 PF00633 Helix-hairpin-helix motif APL_RS04625 PF00730 HhH-GPD superfamily base excision DNA repair protein APL_RS04625 PF10576 Iron-sulfur binding domain of endonuclease III APL_RS04630 PF00108 Thiolase, N-terminal domain APL_RS04630 PF02803 Thiolase, C-terminal domain APL_RS04635 PF00378 Enoyl-CoA hydratase/isomerase family APL_RS04635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APL_RS04635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APL_RS04640 PF06097 APL_RS04640 APL_RS04645 PF03547 APL_RS04645 APL_RS04650 PF02634 FdhD/NarQ family APL_RS04655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APL_RS04660 PF00384 Molybdopterin oxidoreductase APL_RS04660 PF01568 Molydopterin dinucleotide binding domain APL_RS04665 PF09163 Formate dehydrogenase N, transmembrane APL_RS04665 PF13247 4Fe-4S dicluster domain APL_RS04670 PF01292 Prokaryotic cytochrome b561 APL_RS04675 PF04216 Protein involved in formate dehydrogenase formation APL_RS04690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APL_RS04690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APL_RS04695 PF07690 Major Facilitator Superfamily APL_RS04700 PF00701 Dihydrodipicolinate synthetase family APL_RS04705 PF03279 APL_RS04705 APL_RS04710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APL_RS04715 PF01416 tRNA pseudouridine synthase APL_RS04720 PF01227 GTP cyclohydrolase I APL_RS04725 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family APL_RS04730 PF04126 Cyclophilin-like APL_RS04735 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS04735 PF14602 Hexapeptide repeat of succinyl-transferase APL_RS04740 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APL_RS04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS04745 PF03466 LysR substrate binding domain APL_RS04750 PF03180 NLPA lipoprotein APL_RS04755 PF03180 NLPA lipoprotein APL_RS04760 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS04765 PF00005 ABC transporter APL_RS04765 PF09383 NIL domain APL_RS04770 PF01406 tRNA synthetases class I (C) catalytic domain APL_RS04770 PF09190 DALR domain APL_RS04775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APL_RS04780 PF01743 Poly A polymerase head domain APL_RS04780 PF01966 HD domain APL_RS04780 PF12627 Probable RNA and SrmB- binding site of polymerase A APL_RS04790 PF13276 APL_RS04790 APL_RS04800 PF00593 TonB dependent receptor APL_RS04800 PF07715 TonB-dependent Receptor Plug Domain APL_RS04810 PF04575 APL_RS04810 APL_RS04825 PF04384 Iron-sulphur cluster assembly APL_RS04830 PF00111 2Fe-2S iron-sulfur cluster binding domain APL_RS04835 PF00012 Hsp70 protein APL_RS04840 PF10946 APL_RS04840 APL_RS04845 PF04657 APL_RS04845 APL_RS04850 PF07743 HSCB C-terminal oligomerisation domain APL_RS04855 PF01521 Iron-sulphur cluster biosynthesis APL_RS04860 PF01592 NifU-like N terminal domain APL_RS04865 PF00266 Aminotransferase class-V APL_RS04870 PF02082 Transcriptional regulator APL_RS04875 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) APL_RS04880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APL_RS04880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APL_RS04885 PF00072 Response regulator receiver domain APL_RS04885 PF00512 His Kinase A (phospho-acceptor) domain APL_RS04885 PF01627 Hpt domain APL_RS04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS04895 PF01713 Smr domain APL_RS04900 PF13500 AAA domain APL_RS04905 PF08241 Methyltransferase domain APL_RS04910 PF04301 APL_RS04910 APL_RS04915 PF00155 Aminotransferase class I and II APL_RS04920 PF00202 Aminotransferase class-III APL_RS04925 PF05175 Methyltransferase small domain APL_RS04930 PF01272 Transcription elongation factor, GreA/GreB, C-term APL_RS04930 PF03449 Transcription elongation factor, N-terminal APL_RS04935 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family APL_RS04940 PF14542 GCN5-related N-acetyl-transferase APL_RS04945 PF12760 Transposase zinc-ribbon domain APL_RS04945 PF12762 APL_RS04945 APL_RS04955 PF00665 Integrase core domain APL_RS04955 PF13551 Winged helix-turn helix APL_RS04965 PF06114 Domain of unknown function (DUF955) APL_RS04970 PF01381 Helix-turn-helix APL_RS04975 PF12760 Transposase zinc-ribbon domain APL_RS04975 PF12762 APL_RS04975 APL_RS04990 PF03412 Peptidase C39 family APL_RS04995 PF00353 Hemolysin-type calcium-binding repeat (2 copies) APL_RS04995 PF02382 APL_RS04995 APL_RS04995 PF08339 APL_RS04995 APL_RS05000 PF02794 APL_RS05000 APL_RS05005 PF02130 Uncharacterized protein family UPF0054 APL_RS05005 PF13718 GNAT acetyltransferase 2 APL_RS05005 PF17176 APL_RS05005 APL_RS05010 PF01808 AICARFT/IMPCHase bienzyme APL_RS05010 PF02142 MGS-like domain APL_RS05030 PF05594 APL_RS05030 APL_RS05030 PF05860 haemagglutination activity domain APL_RS05030 PF13018 APL_RS05030 APL_RS05030 PF13332 APL_RS05030 APL_RS05035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB APL_RS05040 PF08479 POTRA domain, ShlB-type APL_RS05045 PF03968 OstA-like protein APL_RS05045 PF04453 Organic solvent tolerance protein APL_RS05050 PF04055 Radical SAM superfamily APL_RS05050 PF06969 HemN C-terminal domain APL_RS05055 PF10675 APL_RS05055 APL_RS05060 PF04220 APL_RS05060 APL_RS05065 PF02080 TrkA-C domain APL_RS05065 PF06826 APL_RS05065 APL_RS05070 PF03616 APL_RS05070 APL_RS05075 PF06062 APL_RS05075 APL_RS05080 PF03710 Glutamate-ammonia ligase adenylyltransferase APL_RS05080 PF08335 GlnD PII-uridylyltransferase APL_RS05090 PF03061 Thioesterase superfamily APL_RS05095 PF04279 APL_RS05095 APL_RS05105 PF04217 APL_RS05105 APL_RS05110 PF01171 PP-loop family APL_RS05115 PF03553 APL_RS05115 APL_RS05115 PF13726 APL_RS05115 APL_RS05120 PF03372 Endonuclease/Exonuclease/phosphatase family APL_RS05125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS05125 PF03466 LysR substrate binding domain APL_RS05130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS05140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS05145 PF01197 Ribosomal protein L31 APL_RS05150 PF00456 Transketolase, thiamine diphosphate binding domain APL_RS05150 PF02779 Transketolase, pyrimidine binding domain APL_RS05150 PF02780 Transketolase, C-terminal domain APL_RS05155 PF13518 Helix-turn-helix domain APL_RS05160 PF13276 APL_RS05160 APL_RS05165 PF13333 APL_RS05165 APL_RS05170 PF00183 Hsp90 protein APL_RS05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS05175 PF00199 Catalase APL_RS05175 PF06628 Catalase-related immune-responsive APL_RS05180 PF13518 Helix-turn-helix domain APL_RS05185 PF13333 APL_RS05185 APL_RS05190 PF00149 Calcineurin-like phosphoesterase APL_RS05195 PF00317 Ribonucleotide reductase, all-alpha domain APL_RS05195 PF02867 Ribonucleotide reductase, barrel domain APL_RS05195 PF03477 ATP cone domain APL_RS05200 PF00268 Ribonucleotide reductase, small chain APL_RS05205 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain APL_RS05205 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain APL_RS05210 PF00288 GHMP kinases N terminal domain APL_RS05210 PF08544 GHMP kinases C terminal APL_RS05210 PF10509 Galactokinase galactose-binding signature APL_RS05215 PF01263 Aldose 1-epimerase APL_RS05220 PF00703 Glycosyl hydrolases family 2 APL_RS05220 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APL_RS05220 PF02837 Glycosyl hydrolases family 2, sugar binding domain APL_RS05220 PF02929 Beta galactosidase small chain APL_RS05220 PF16353 APL_RS05220 APL_RS05225 PF00353 Hemolysin-type calcium-binding repeat (2 copies) APL_RS05235 PF10609 ParA/MinD ATPase like APL_RS05240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS05245 PF01914 APL_RS05245 APL_RS05250 PF13145 PPIC-type PPIASE domain APL_RS05250 PF13624 SurA N-terminal domain APL_RS05255 PF00999 Sodium/hydrogen exchanger family APL_RS05260 PF00312 Ribosomal protein S15 APL_RS05265 PF05661 APL_RS05265 APL_RS05270 PF07219 APL_RS05270 APL_RS05275 PF04375 APL_RS05275 APL_RS05280 PF02602 Uroporphyrinogen-III synthase HemD APL_RS05285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APL_RS05285 PF03900 Porphobilinogen deaminase, C-terminal domain APL_RS05290 PF00171 Aldehyde dehydrogenase family APL_RS05290 PF00465 Iron-containing alcohol dehydrogenase APL_RS05295 PF00118 TCP-1/cpn60 chaperonin family APL_RS05300 PF00166 Chaperonin 10 Kd subunit APL_RS05305 PF01048 Phosphorylase superfamily APL_RS05310 PF01791 DeoC/LacD family aldolase APL_RS05315 PF01773 Na+ dependent nucleoside transporter N-terminus APL_RS05315 PF07662 Na+ dependent nucleoside transporter C-terminus APL_RS05315 PF07670 Nucleoside recognition APL_RS05325 PF01081 KDPG and KHG aldolase APL_RS05330 PF00294 pfkB family carbohydrate kinase APL_RS05335 PF02614 Glucuronate isomerase APL_RS05340 PF01055 Glycosyl hydrolases family 31 APL_RS05340 PF17137 APL_RS05340 APL_RS05345 PF00392 Bacterial regulatory proteins, gntR family APL_RS05350 PF00892 EamA-like transporter family APL_RS05355 PF01625 Peptide methionine sulfoxide reductase APL_RS05360 PF00535 Glycosyl transferase family 2 APL_RS05365 PF00535 Glycosyl transferase family 2 APL_RS05375 PF01755 APL_RS05375 APL_RS05385 PF04230 APL_RS05385 APL_RS05390 PF02698 DUF218 domain APL_RS05395 PF00270 DEAD/DEAH box helicase APL_RS05395 PF00271 Helicase conserved C-terminal domain APL_RS05400 PF00800 Prephenate dehydratase APL_RS05400 PF01817 Chorismate mutase type II APL_RS05405 PF01432 Peptidase family M3 APL_RS05410 PF04055 Radical SAM superfamily APL_RS05410 PF13353 4Fe-4S single cluster domain APL_RS05415 PF01228 Glycine radical APL_RS05415 PF02901 Pyruvate formate lyase APL_RS05420 PF01226 Formate/nitrite transporter APL_RS05425 PF09335 APL_RS05425 APL_RS05430 PF01435 Peptidase family M48 APL_RS05435 PF00817 impB/mucB/samB family APL_RS05435 PF11798 IMS family HHH motif APL_RS05435 PF11799 impB/mucB/samB family C-terminal domain APL_RS05440 PF03956 APL_RS05440 APL_RS05445 PF00425 chorismate binding enzyme APL_RS05450 PF00155 Aminotransferase class I and II APL_RS05455 PF00892 EamA-like transporter family APL_RS05460 PF00892 EamA-like transporter family APL_RS05465 PF01810 APL_RS05465 APL_RS05470 PF00593 TonB dependent receptor APL_RS05470 PF07715 TonB-dependent Receptor Plug Domain APL_RS05475 PF01243 Pyridoxamine 5'-phosphate oxidase APL_RS05485 PF03918 Cytochrome C biogenesis protein APL_RS05490 PF08534 Redoxin APL_RS05495 PF01578 APL_RS05495 APL_RS05495 PF16327 APL_RS05495 APL_RS05500 PF00999 Sodium/hydrogen exchanger family APL_RS05500 PF02254 TrkA-N domain APL_RS05505 PF01295 APL_RS05505 APL_RS05505 PF12633 APL_RS05505 APL_RS05510 PF00109 Beta-ketoacyl synthase, N-terminal domain APL_RS05510 PF02801 Beta-ketoacyl synthase, C-terminal domain APL_RS05515 PF13518 Helix-turn-helix domain APL_RS05525 PF13276 APL_RS05525 APL_RS05530 PF13333 APL_RS05530 APL_RS05535 PF04076 Bacterial OB fold (BOF) protein APL_RS05540 PF04076 Bacterial OB fold (BOF) protein APL_RS05545 PF04076 Bacterial OB fold (BOF) protein APL_RS05550 PF00072 Response regulator receiver domain APL_RS05550 PF00486 Transcriptional regulatory protein, C terminal APL_RS05555 PF00512 His Kinase A (phospho-acceptor) domain APL_RS05555 PF00672 HAMP domain APL_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS05560 PF09695 APL_RS05560 APL_RS05565 PF02699 Preprotein translocase subunit APL_RS05570 PF02355 Protein export membrane protein APL_RS05570 PF07549 SecD/SecF GG Motif APL_RS05570 PF13721 SecD export protein N-terminal TM region APL_RS05575 PF02355 Protein export membrane protein APL_RS05575 PF07549 SecD/SecF GG Motif APL_RS05580 PF00210 Ferritin-like domain APL_RS05585 PF00210 Ferritin-like domain APL_RS05590 PF00860 Permease family APL_RS05595 PF02545 Maf-like protein APL_RS05600 PF02627 Carboxymuconolactone decarboxylase family APL_RS05605 PF02568 Thiamine biosynthesis protein (ThiI) APL_RS05605 PF02926 THUMP domain APL_RS05610 PF00709 Adenylosuccinate synthetase APL_RS05615 PF01145 SPFH domain / Band 7 family APL_RS05620 PF01145 SPFH domain / Band 7 family APL_RS05620 PF12221 APL_RS05620 APL_RS05625 PF00085 Thioredoxin APL_RS05630 PF00860 Permease family APL_RS05635 PF00438 S-adenosylmethionine synthetase, N-terminal domain APL_RS05635 PF02772 S-adenosylmethionine synthetase, central domain APL_RS05635 PF02773 S-adenosylmethionine synthetase, C-terminal domain APL_RS05640 PF02574 Homocysteine S-methyltransferase APL_RS05645 PF13520 Amino acid permease APL_RS05650 PF13520 Amino acid permease APL_RS05660 PF01546 Peptidase family M20/M25/M40 APL_RS05660 PF07687 Peptidase dimerisation domain APL_RS05665 PF03922 OmpW family APL_RS05670 PF00004 ATPase family associated with various cellular activities (AAA) APL_RS05670 PF02861 Clp amino terminal domain APL_RS05670 PF07724 AAA domain (Cdc48 subfamily) APL_RS05670 PF10431 C-terminal, D2-small domain, of ClpB protein APL_RS05675 PF01758 Sodium Bile acid symporter family APL_RS05680 PF03960 ArsC family APL_RS05685 PF12840 Helix-turn-helix domain APL_RS05690 PF00206 Lyase APL_RS05690 PF10415 Fumarase C C-terminus APL_RS05695 PF06961 APL_RS05695 APL_RS05700 PF00892 EamA-like transporter family APL_RS05705 PF00155 Aminotransferase class I and II APL_RS05705 PF00392 Bacterial regulatory proteins, gntR family APL_RS05710 PF00586 AIR synthase related protein, N-terminal domain APL_RS05710 PF02769 AIR synthase related protein, C-terminal domain APL_RS05715 PF00728 Glycosyl hydrolase family 20, catalytic domain APL_RS05720 PF06508 Queuosine biosynthesis protein QueC APL_RS05725 PF01242 6-pyruvoyl tetrahydropterin synthase APL_RS05730 PF04055 Radical SAM superfamily APL_RS05730 PF13394 4Fe-4S single cluster domain APL_RS05745 PF00883 Cytosol aminopeptidase family, catalytic domain APL_RS05745 PF02789 Cytosol aminopeptidase family, N-terminal domain APL_RS05755 PF03739 APL_RS05755 APL_RS05760 PF03739 APL_RS05760 APL_RS05765 PF01336 OB-fold nucleic acid binding domain APL_RS05765 PF02811 PHP domain APL_RS05765 PF07733 Bacterial DNA polymerase III alpha subunit APL_RS05765 PF14579 Helix-hairpin-helix motif APL_RS05770 PF01370 NAD dependent epimerase/dehydratase family APL_RS05770 PF02222 ATP-grasp domain APL_RS05775 PF01553 Acyltransferase APL_RS05780 PF00717 Peptidase S24-like APL_RS05780 PF01726 LexA DNA binding domain APL_RS05785 PF02976 DNA mismatch repair enzyme MutH APL_RS05790 PF03741 APL_RS05790 APL_RS05795 PF00933 Glycosyl hydrolase family 3 N terminal domain APL_RS05800 PF05958 tRNA (Uracil-5-)-methyltransferase APL_RS05805 PF00113 Enolase, C-terminal TIM barrel domain APL_RS05805 PF03952 Enolase, N-terminal domain APL_RS05810 PF00293 NUDIX domain APL_RS05810 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal APL_RS05815 PF10008 APL_RS05815 APL_RS05820 PF00270 DEAD/DEAH box helicase APL_RS05820 PF00271 Helicase conserved C-terminal domain APL_RS05820 PF00570 HRDC domain APL_RS05820 PF09382 RQC domain APL_RS05820 PF16124 APL_RS05820 APL_RS05825 PF01491 Frataxin-like domain APL_RS05830 PF01755 APL_RS05830 APL_RS05835 PF01755 APL_RS05835 APL_RS05840 PF00814 Glycoprotease family APL_RS05845 PF13525 Outer membrane lipoprotein APL_RS05850 PF00849 RNA pseudouridylate synthase APL_RS05850 PF01479 S4 domain APL_RS05855 PF14256 APL_RS05855 APL_RS05860 PF00365 Phosphofructokinase APL_RS05865 PF00266 Aminotransferase class-V APL_RS05870 PF00565 Staphylococcal nuclease homologue APL_RS05875 PF01235 APL_RS05875 APL_RS05880 PF01594 APL_RS05880 APL_RS05885 PF07361 Cytochrome b562 APL_RS05890 PF01136 APL_RS05890 APL_RS05890 PF16325 APL_RS05890 APL_RS05895 PF04932 APL_RS05895 APL_RS05900 PF00534 Glycosyl transferases group 1 APL_RS05900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APL_RS05905 PF01467 Cytidylyltransferase APL_RS05910 PF00929 Exonuclease APL_RS05915 PF02367 Uncharacterised P-loop hydrolase UPF0079 APL_RS05920 PF01476 LysM domain APL_RS05920 PF01520 N-acetylmuramoyl-L-alanine amidase APL_RS05925 PF00342 Phosphoglucose isomerase APL_RS05930 PF04380 APL_RS05930 APL_RS05960 PF01488 Shikimate / quinate 5-dehydrogenase APL_RS05960 PF08501 Shikimate dehydrogenase substrate binding domain APL_RS05965 PF01300 Telomere recombination APL_RS05970 PF01396 APL_RS05970 APL_RS05975 PF04266 ASCH domain APL_RS05980 PF02631 RecX family APL_RS05985 PF00154 recA bacterial DNA recombination protein APL_RS05995 PF00425 chorismate binding enzyme APL_RS06000 PF02646 APL_RS06000 APL_RS06005 PF00117 Glutamine amidotransferase class-I APL_RS06010 PF03625 Domain of unknown function DUF302 APL_RS06015 PF00152 tRNA synthetases class II (D, K and N) APL_RS06015 PF01336 OB-fold nucleic acid binding domain APL_RS06015 PF02938 GAD domain APL_RS06020 PF00293 NUDIX domain APL_RS06025 PF01709 Transcriptional regulator APL_RS06035 PF02075 Crossover junction endodeoxyribonuclease RuvC APL_RS06040 PF00675 Insulinase (Peptidase family M16) APL_RS06040 PF05193 Peptidase M16 inactive domain APL_RS06045 PF01717 Cobalamin-independent synthase, Catalytic domain APL_RS06045 PF08267 Cobalamin-independent synthase, N-terminal domain APL_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS06055 PF03466 LysR substrate binding domain APL_RS06060 PF01298 Transferrin binding protein-like solute binding protein APL_RS06065 PF00849 RNA pseudouridylate synthase APL_RS06065 PF01479 S4 domain APL_RS06070 PF01300 Telomere recombination APL_RS06080 PF04261 Dyp-type peroxidase family APL_RS06085 PF00425 chorismate binding enzyme APL_RS06085 PF04715 Anthranilate synthase component I, N terminal region APL_RS06090 PF00117 Glutamine amidotransferase class-I APL_RS06095 PF00591 Glycosyl transferase family, a/b domain APL_RS06095 PF02885 Glycosyl transferase family, helical bundle domain APL_RS06100 PF08241 Methyltransferase domain APL_RS06110 PF04325 Protein of unknown function (DUF465) APL_RS06115 PF01281 Ribosomal protein L9, N-terminal domain APL_RS06115 PF03948 Ribosomal protein L9, C-terminal domain APL_RS06120 PF01084 Ribosomal protein S18 APL_RS06125 PF00436 Single-strand binding protein family APL_RS06130 PF01250 Ribosomal protein S6 APL_RS06135 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APL_RS06135 PF02843 Phosphoribosylglycinamide synthetase, C domain APL_RS06135 PF02844 Phosphoribosylglycinamide synthetase, N domain APL_RS06140 PF04973 APL_RS06140 APL_RS06145 PF09976 Tetratricopeptide repeat APL_RS06150 PF03129 Anticodon binding domain APL_RS06150 PF13393 Histidyl-tRNA synthetase APL_RS06155 PF04551 GcpE protein APL_RS06160 PF13413 Helix-turn-helix domain APL_RS06160 PF13464 APL_RS06160 APL_RS06165 PF00916 APL_RS06165 APL_RS06170 PF00206 Lyase APL_RS06170 PF14698 Argininosuccinate lyase C-terminal APL_RS06175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APL_RS06175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APL_RS06180 PF00999 Sodium/hydrogen exchanger family APL_RS06180 PF02254 TrkA-N domain APL_RS06185 PF13173 AAA domain APL_RS06185 PF13635 APL_RS06185 APL_RS06190 PF13289 APL_RS06190 APL_RS06195 PF08937 MTH538 TIR-like domain (DUF1863) APL_RS06200 PF08937 MTH538 TIR-like domain (DUF1863) APL_RS06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS06205 PF03466 LysR substrate binding domain APL_RS06210 PF07366 SnoaL-like polyketide cyclase APL_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS06225 PF03466 LysR substrate binding domain APL_RS06230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APL_RS06235 PF00296 Luciferase-like monooxygenase APL_RS06240 PF01420 Type I restriction modification DNA specificity domain APL_RS06245 PF02384 N-6 DNA Methylase APL_RS06250 PF04326 Divergent AAA domain APL_RS06250 PF13749 ATP-dependent DNA helicase recG C-terminal APL_RS06255 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APL_RS06255 PF04851 Type III restriction enzyme, res subunit APL_RS06260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APL_RS06260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APL_RS06265 PF00881 Nitroreductase family APL_RS06270 PF01914 APL_RS06270 APL_RS06275 PF03852 DNA mismatch endonuclease Vsr APL_RS06280 PF09509 APL_RS06280 APL_RS06280 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS06285 PF00145 C-5 cytosine-specific DNA methylase APL_RS06290 PF04336 APL_RS06290 APL_RS06295 PF00756 Putative esterase APL_RS06305 PF01850 PIN domain APL_RS06310 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system APL_RS06315 PF00107 Zinc-binding dehydrogenase APL_RS06315 PF08240 Alcohol dehydrogenase GroES-like domain APL_RS06320 PF02028 BCCT family transporter APL_RS06325 PF13302 Acetyltransferase (GNAT) domain APL_RS06330 PF01904 Protein of unknown function DUF72 APL_RS06335 PF03595 Voltage-dependent anion channel APL_RS06340 PF13419 Haloacid dehalogenase-like hydrolase APL_RS06345 PF01613 Flavin reductase like domain APL_RS06350 PF00005 ABC transporter APL_RS06350 PF00664 ABC transporter transmembrane region APL_RS06355 PF02664 S-Ribosylhomocysteinase (LuxS) APL_RS06360 PF02470 APL_RS06360 APL_RS06365 PF01475 Ferric uptake regulator family APL_RS06370 PF00258 Flavodoxin APL_RS06380 PF04073 Aminoacyl-tRNA editing domain APL_RS06385 PF02774 Semialdehyde dehydrogenase, dimerisation domain APL_RS06390 PF00860 Permease family APL_RS06395 PF02635 DsrE/DsrF-like family APL_RS06405 PF00872 APL_RS06405 APL_RS06410 PF01176 Translation initiation factor 1A / IF-1 APL_RS06415 PF10144 APL_RS06415 APL_RS06420 PF12710 haloacid dehalogenase-like hydrolase APL_RS06425 PF04461 Protein of unknown function (DUF520) APL_RS06435 PF00343 Carbohydrate phosphorylase APL_RS06440 PF00196 Bacterial regulatory proteins, luxR family APL_RS06445 PF07148 APL_RS06445 APL_RS06450 PF02264 LamB porin APL_RS06455 PF00005 ABC transporter APL_RS06455 PF08402 TOBE domain APL_RS06460 PF13416 Bacterial extracellular solute-binding protein APL_RS06465 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS06465 PF14785 Maltose transport system permease protein MalF P2 domain APL_RS06470 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS06475 PF02446 4-alpha-glucanotransferase APL_RS06480 PF02554 APL_RS06480 APL_RS06480 PF13722 APL_RS06480 APL_RS06485 PF01026 TatD related DNase APL_RS06490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APL_RS06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase APL_RS06495 PF00872 APL_RS06495 APL_RS06500 PF03350 APL_RS06500 APL_RS06505 PF00881 Nitroreductase family APL_RS06510 PF05437 APL_RS06510 APL_RS06515 PF03591 APL_RS06515 APL_RS06520 PF00005 ABC transporter APL_RS06525 PF01116 Fructose-bisphosphate aldolase class-II APL_RS06530 PF00162 Phosphoglycerate kinase APL_RS06535 PF00939 Sodium:sulfate symporter transmembrane region APL_RS06540 PF03600 Citrate transporter APL_RS06545 PF00939 Sodium:sulfate symporter transmembrane region APL_RS06550 PF00204 DNA gyrase B APL_RS06550 PF00986 DNA gyrase B subunit, carboxyl terminus APL_RS06550 PF01751 Toprim domain APL_RS06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS06555 PF00512 His Kinase A (phospho-acceptor) domain APL_RS06555 PF00989 PAS fold APL_RS06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS06555 PF11808 APL_RS06555 APL_RS06560 PF00072 Response regulator receiver domain APL_RS06560 PF00486 Transcriptional regulatory protein, C terminal APL_RS06565 PF00005 ABC transporter APL_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS06580 PF12849 PBP superfamily domain APL_RS06585 PF00376 MerR family regulatory protein APL_RS06585 PF09278 MerR, DNA binding APL_RS06590 PF04214 APL_RS06590 APL_RS06595 PF00403 Heavy-metal-associated domain APL_RS06600 PF00122 E1-E2 ATPase APL_RS06600 PF00403 Heavy-metal-associated domain APL_RS06600 PF00702 haloacid dehalogenase-like hydrolase APL_RS06605 PF00106 short chain dehydrogenase APL_RS06610 PF00881 Nitroreductase family APL_RS06615 PF01343 Peptidase family S49 APL_RS06620 PF00445 Ribonuclease T2 family APL_RS06625 PF10263 APL_RS06625 APL_RS06630 PF07992 Pyridine nucleotide-disulphide oxidoreductase APL_RS06635 PF00575 S1 RNA binding domain APL_RS06635 PF09371 Tex-like protein N-terminal domain APL_RS06635 PF12836 Helix-hairpin-helix motif APL_RS06635 PF16921 APL_RS06635 APL_RS06640 PF13181 Tetratricopeptide repeat APL_RS06645 PF04055 Radical SAM superfamily APL_RS06670 PF00749 tRNA synthetases class I (E and Q), catalytic domain APL_RS06680 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system APL_RS06685 PF06769 Plasmid encoded toxin Txe APL_RS06690 PF03966 Trm112p-like protein APL_RS06695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APL_RS06700 PF06689 ClpX C4-type zinc finger APL_RS06700 PF07724 AAA domain (Cdc48 subfamily) APL_RS06700 PF10431 C-terminal, D2-small domain, of ClpB protein APL_RS06705 PF00574 Clp protease APL_RS06710 PF02657 Fe-S metabolism associated domain APL_RS06725 PF00929 Exonuclease APL_RS06730 PF00005 ABC transporter APL_RS06730 PF12848 ABC transporter APL_RS06735 PF02627 Carboxymuconolactone decarboxylase family APL_RS06740 PF00581 Rhodanese-like domain APL_RS06750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APL_RS06755 PF01722 BolA-like protein APL_RS06760 PF13466 STAS domain APL_RS06765 PF05494 Toluene tolerance, Ttg2 APL_RS06770 PF02470 APL_RS06770 APL_RS06775 PF02405 APL_RS06775 APL_RS06780 PF00005 ABC transporter APL_RS06785 PF00595 PDZ domain (Also known as DHR or GLGF) APL_RS06785 PF13180 PDZ domain APL_RS06785 PF13365 Trypsin-like peptidase domain APL_RS06790 PF01370 NAD dependent epimerase/dehydratase family APL_RS06790 PF08338 Domain of unknown function (DUF1731) APL_RS06795 PF01316 Arginine repressor, DNA binding domain APL_RS06795 PF02863 Arginine repressor, C-terminal domain APL_RS06800 PF00056 lactate/malate dehydrogenase, NAD binding domain APL_RS06800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APL_RS06810 PF00406 Adenylate kinase APL_RS06810 PF05191 Adenylate kinase, active site lid APL_RS06815 PF00593 TonB dependent receptor APL_RS06815 PF07715 TonB-dependent Receptor Plug Domain APL_RS06820 PF07690 Major Facilitator Superfamily APL_RS06825 PF16363 APL_RS06825 APL_RS06830 PF00533 BRCA1 C Terminus (BRCT) domain APL_RS06830 PF01653 NAD-dependent DNA ligase adenylation domain APL_RS06830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APL_RS06830 PF03120 NAD-dependent DNA ligase OB-fold domain APL_RS06830 PF12826 Helix-hairpin-helix motif APL_RS06830 PF14520 Helix-hairpin-helix domain APL_RS06835 PF04354 ZipA, C-terminal FtsZ-binding domain APL_RS06840 PF07264 Etoposide-induced protein 2 APL_RS06850 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APL_RS06850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APL_RS06865 PF07690 Major Facilitator Superfamily APL_RS06870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APL_RS06875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APL_RS06875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APL_RS06880 PF00459 Inositol monophosphatase family APL_RS06885 PF00293 NUDIX domain APL_RS06890 PF01479 S4 domain APL_RS06895 PF01430 Hsp33 protein APL_RS06900 PF03605 APL_RS06900 APL_RS06910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APL_RS06910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APL_RS06915 PF00696 Amino acid kinase family APL_RS06920 PF00367 phosphotransferase system, EIIB APL_RS06920 PF02378 Phosphotransferase system, EIIC APL_RS06925 PF00005 ABC transporter APL_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS06935 PF00381 PTS HPr component phosphorylation site APL_RS06940 PF00391 PEP-utilising enzyme, mobile domain APL_RS06940 PF02896 PEP-utilising enzyme, TIM barrel domain APL_RS06940 PF05524 PEP-utilising enzyme, N-terminal APL_RS06945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APL_RS06950 PF00919 Uncharacterized protein family UPF0004 APL_RS06950 PF01938 TRAM domain APL_RS06950 PF04055 Radical SAM superfamily APL_RS06955 PF00580 UvrD/REP helicase N-terminal domain APL_RS06955 PF13361 UvrD-like helicase C-terminal domain APL_RS06960 PF02492 CobW/HypB/UreG, nucleotide-binding domain APL_RS06965 PF01924 Hydrogenase formation hypA family APL_RS06970 PF00586 AIR synthase related protein, N-terminal domain APL_RS06970 PF02769 AIR synthase related protein, C-terminal domain APL_RS06975 PF00708 Acylphosphatase APL_RS06975 PF01300 Telomere recombination APL_RS06975 PF07503 HypF finger APL_RS06980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APL_RS06980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal APL_RS06985 PF13247 4Fe-4S dicluster domain APL_RS06990 PF03916 APL_RS06990 APL_RS06995 PF00374 Nickel-dependent hydrogenase APL_RS07000 PF01750 Hydrogenase maturation protease APL_RS07005 PF11939 Protein of unknown function (DUF3457) APL_RS07010 PF01455 HupF/HypC family APL_RS07015 PF01155 Hydrogenase expression/synthesis hypA family APL_RS07050 PF00270 DEAD/DEAH box helicase APL_RS07050 PF00271 Helicase conserved C-terminal domain APL_RS07050 PF02559 CarD-like/TRCF domain APL_RS07050 PF03461 TRCF domain APL_RS07055 PF01433 Peptidase family M1 APL_RS07055 PF11940 Domain of unknown function (DUF3458) APL_RS07060 PF02660 APL_RS07060 APL_RS07065 PF02152 Dihydroneopterin aldolase APL_RS07070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APL_RS07070 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region APL_RS07075 PF02687 APL_RS07075 APL_RS07080 PF00005 ABC transporter APL_RS07085 PF00448 SRP54-type protein, GTPase domain APL_RS07085 PF02881 SRP54-type protein, helical bundle domain APL_RS07090 PF03602 Conserved hypothetical protein 95 APL_RS07095 PF04269 Protein of unknown function, DUF440 APL_RS07100 PF01613 Flavin reductase like domain APL_RS07105 PF03848 Tellurite resistance protein TehB APL_RS07105 PF09313 Domain of unknown function (DUF1971) APL_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS07120 PF00497 Bacterial extracellular solute-binding proteins, family 3 APL_RS07125 PF00005 ABC transporter APL_RS07130 PF01161 Phosphatidylethanolamine-binding protein APL_RS07135 PF01699 Sodium/calcium exchanger protein APL_RS07140 PF01381 Helix-turn-helix APL_RS07145 PF05973 APL_RS07145 APL_RS07150 PF02683 APL_RS07150 APL_RS07150 PF11412 Disulphide bond corrector protein DsbC APL_RS07150 PF13098 Thioredoxin-like domain APL_RS07155 PF04315 APL_RS07155 APL_RS07160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APL_RS07165 PF04348 LppC putative lipoprotein APL_RS07170 PF02021 Uncharacterised protein family UPF0102 APL_RS07175 PF13580 SIS domain APL_RS07180 PF04972 BON domain APL_RS07185 PF00497 Bacterial extracellular solute-binding proteins, family 3 APL_RS07185 PF01464 Transglycosylase SLT domain APL_RS07205 PF01578 APL_RS07205 APL_RS07205 PF16327 APL_RS07205 APL_RS07210 PF03100 CcmE APL_RS07215 PF04995 APL_RS07215 APL_RS07220 PF01578 APL_RS07220 APL_RS07225 PF03379 APL_RS07225 APL_RS07230 PF00005 ABC transporter APL_RS07235 PF00308 Bacterial dnaA protein APL_RS07275 PF04277 APL_RS07275 APL_RS07280 PF00364 Biotin-requiring enzyme APL_RS07280 PF00682 HMGL-like APL_RS07280 PF02436 Conserved carboxylase domain APL_RS07285 PF03977 APL_RS07285 APL_RS07290 PF03831 PhnA protein APL_RS07290 PF08274 PhnA Zinc-Ribbon APL_RS07295 PF00034 Cytochrome c APL_RS07295 PF03150 Di-haem cytochrome c peroxidase APL_RS07295 PF14376 APL_RS07295 APL_RS07300 PF02594 Uncharacterised ACR, YggU family COG1872 APL_RS07305 PF02325 APL_RS07305 APL_RS07310 PF04320 APL_RS07310 APL_RS07315 PF02390 Putative methyltransferase APL_RS07320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APL_RS07320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APL_RS07325 PF02504 Fatty acid synthesis protein APL_RS07330 PF01783 Ribosomal L32p protein family APL_RS07335 PF02620 APL_RS07335 APL_RS07340 PF01578 APL_RS07340 APL_RS07345 PF00571 CBS domain APL_RS07345 PF01595 APL_RS07345 APL_RS07345 PF03471 Transporter associated domain APL_RS07350 PF00209 Sodium:neurotransmitter symporter family APL_RS07360 PF03610 PTS system fructose IIA component APL_RS07360 PF03830 PTS system sorbose subfamily IIB component APL_RS07365 PF03609 APL_RS07365 APL_RS07370 PF03613 APL_RS07370 APL_RS07375 PF06173 APL_RS07375 APL_RS07380 PF01238 Phosphomannose isomerase type I APL_RS07390 PF00872 APL_RS07390 APL_RS07395 PF00009 Elongation factor Tu GTP binding domain APL_RS07395 PF03143 Elongation factor Tu C-terminal domain APL_RS07395 PF03144 Elongation factor Tu domain 2 APL_RS07400 PF00009 Elongation factor Tu GTP binding domain APL_RS07400 PF00679 Elongation factor G C-terminus APL_RS07400 PF03144 Elongation factor Tu domain 2 APL_RS07400 PF03764 Elongation factor G, domain IV APL_RS07400 PF14492 Elongation Factor G, domain II APL_RS07405 PF00177 Ribosomal protein S7p/S5e APL_RS07410 PF00164 Ribosomal protein S12/S23 APL_RS07415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS07420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APL_RS07425 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme APL_RS07430 PF04225 Opacity-associated protein A LysM-like domain APL_RS07435 PF12836 Helix-hairpin-helix motif APL_RS07440 PF02666 APL_RS07440 APL_RS07445 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APL_RS07445 PF04262 Glutamate-cysteine ligase APL_RS07450 PF13411 MerR HTH family regulatory protein APL_RS07455 PF03222 Tryptophan/tyrosine permease family APL_RS07460 PF04175 Protein of unknown function (DUF406) APL_RS07465 PF00248 Aldo/keto reductase family APL_RS07470 PF00501 AMP-binding enzyme APL_RS07475 PF06039 APL_RS07475 APL_RS07485 PF05433 APL_RS07485 APL_RS07490 PF05232 APL_RS07490 APL_RS07495 PF02653 APL_RS07495 APL_RS07500 PF00005 ABC transporter APL_RS07505 PF13407 Periplasmic binding protein domain APL_RS07510 PF00691 OmpA family APL_RS07510 PF01389 OmpA-like transmembrane domain APL_RS07515 PF01565 FAD binding domain APL_RS07515 PF02913 FAD linked oxidases, C-terminal domain APL_RS07515 PF13183 4Fe-4S dicluster domain APL_RS07520 PF03061 Thioesterase superfamily APL_RS07530 PF03264 NapC/NirT cytochrome c family, N-terminal region APL_RS07535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) APL_RS07540 PF12801 APL_RS07540 APL_RS07540 PF12838 4Fe-4S dicluster domain APL_RS07545 PF12800 4Fe-4S binding domain APL_RS07545 PF12838 4Fe-4S dicluster domain APL_RS07550 PF00384 Molybdopterin oxidoreductase APL_RS07550 PF01568 Molydopterin dinucleotide binding domain APL_RS07550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APL_RS07550 PF10518 TAT (twin-arginine translocation) pathway signal sequence APL_RS07555 PF03927 NapD protein APL_RS07560 PF12838 4Fe-4S dicluster domain APL_RS07560 PF13187 4Fe-4S dicluster domain APL_RS07565 PF02525 Flavodoxin-like fold APL_RS07570 PF00665 Integrase core domain APL_RS07570 PF13276 APL_RS07570 APL_RS07575 PF13518 Helix-turn-helix domain APL_RS07585 PF00575 S1 RNA binding domain APL_RS07585 PF10150 Ribonuclease E/G family APL_RS07585 PF12111 Polyribonucleotide phosphorylase C terminal APL_RS07590 PF11738 Protein of unknown function (DUF3298) APL_RS07595 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family APL_RS07600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APL_RS07605 PF01297 Periplasmic solute binding protein family APL_RS07610 PF00872 APL_RS07610 APL_RS07615 PF13437 HlyD family secretion protein APL_RS07620 PF00005 ABC transporter APL_RS07620 PF00664 ABC transporter transmembrane region APL_RS07620 PF03412 Peptidase C39 family APL_RS07625 PF00353 Hemolysin-type calcium-binding repeat (2 copies) APL_RS07625 PF02382 APL_RS07625 APL_RS07625 PF08339 APL_RS07625 APL_RS07630 PF02794 APL_RS07630 APL_RS07635 PF13343 Bacterial extracellular solute-binding protein APL_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS07645 PF00005 ABC transporter APL_RS07645 PF08402 TOBE domain APL_RS07650 PF01225 Mur ligase family, catalytic domain APL_RS07650 PF02875 Mur ligase family, glutamate ligase domain APL_RS07650 PF08245 Mur ligase middle domain APL_RS07655 PF00316 Fructose-1-6-bisphosphatase APL_RS07660 PF00872 APL_RS07660 APL_RS07665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APL_RS07665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APL_RS07670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APL_RS07675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APL_RS07675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APL_RS07675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APL_RS07675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APL_RS07680 PF00291 Pyridoxal-phosphate dependent enzyme APL_RS07680 PF00585 C-terminal regulatory domain of Threonine dehydratase APL_RS07685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APL_RS07690 PF00230 Major intrinsic protein APL_RS07695 PF04402 Protein of unknown function (DUF541) APL_RS07700 PF01980 Uncharacterised protein family UPF0066 APL_RS07705 PF06250 APL_RS07705 APL_RS07710 PF01040 UbiA prenyltransferase family APL_RS07715 PF01521 Iron-sulphur cluster biosynthesis APL_RS07720 PF01061 APL_RS07720 APL_RS07725 PF00005 ABC transporter APL_RS07740 PF03275 UDP-galactopyranose mutase APL_RS07740 PF13450 NAD(P)-binding Rossmann-like domain APL_RS07745 PF04607 Region found in RelA / SpoT proteins APL_RS07750 PF00535 Glycosyl transferase family 2 APL_RS07755 PF14393 APL_RS07755 APL_RS07760 PF02397 APL_RS07760 APL_RS07765 PF16363 APL_RS07765 APL_RS07770 PF01165 Ribosomal protein S21 APL_RS07775 PF01807 CHC2 zinc finger APL_RS07775 PF08275 DNA primase catalytic core, N-terminal domain APL_RS07775 PF08278 DNA primase DnaG DnaB-binding APL_RS07775 PF10410 DnaB-helicase binding domain of primase APL_RS07775 PF13155 Toprim-like APL_RS07780 PF00140 Sigma-70 factor, region 1 APL_RS07780 PF03979 Sigma-70 factor, region 1 APL_RS07780 PF04539 Sigma-70 region 3 APL_RS07780 PF04542 Sigma-70 region 2 APL_RS07780 PF04545 Sigma-70, region 4 APL_RS07780 PF04546 Sigma-70, non-essential region APL_RS07785 PF00579 tRNA synthetases class I (W and Y) APL_RS07785 PF01479 S4 domain APL_RS07795 PF00575 S1 RNA binding domain APL_RS07795 PF00773 RNB domain APL_RS07795 PF08206 Ribonuclease B OB domain APL_RS07795 PF08461 Ribonuclease R winged-helix domain APL_RS07800 PF00578 AhpC/TSA family APL_RS07805 PF00440 Bacterial regulatory proteins, tetR family APL_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS07810 PF03466 LysR substrate binding domain APL_RS07815 PF00462 Glutaredoxin APL_RS07815 PF08534 Redoxin APL_RS07820 PF00872 APL_RS07820 APL_RS07830 PF08543 Phosphomethylpyrimidine kinase APL_RS07840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APL_RS07845 PF07731 Multicopper oxidase APL_RS07845 PF07732 Multicopper oxidase APL_RS07850 PF01553 Acyltransferase APL_RS07855 PF08534 Redoxin APL_RS07860 PF01926 50S ribosome-binding GTPase APL_RS07860 PF10396 GTP-binding protein TrmE N-terminus APL_RS07860 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE APL_RS07865 PF05167 Uncharacterised ACR (DUF711) APL_RS07870 PF13740 ACT domain APL_RS07875 PF02678 Pirin APL_RS07880 PF00210 Ferritin-like domain APL_RS07885 PF13744 Helix-turn-helix domain APL_RS07890 PF01734 Patatin-like phospholipase APL_RS07895 PF12805 APL_RS07895 APL_RS07895 PF13515 APL_RS07895 APL_RS07900 PF02142 MGS-like domain APL_RS07905 PF00291 Pyridoxal-phosphate dependent enzyme APL_RS07905 PF14821 Threonine synthase N terminus APL_RS07910 PF13518 Helix-turn-helix domain APL_RS07915 PF00665 Integrase core domain APL_RS07915 PF13276 APL_RS07915 APL_RS07920 PF00133 tRNA synthetases class I (I, L, M and V) APL_RS07920 PF08264 Anticodon-binding domain of tRNA APL_RS07920 PF10458 Valyl tRNA synthetase tRNA binding arm APL_RS07930 PF13673 Acetyltransferase (GNAT) domain APL_RS07935 PF04364 DNA polymerase III chi subunit, HolC APL_RS07940 PF01476 LysM domain APL_RS07940 PF04972 BON domain APL_RS07945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APL_RS07945 PF05697 Bacterial trigger factor protein (TF) APL_RS07945 PF05698 Bacterial trigger factor protein (TF) C-terminus APL_RS07950 PF00581 Rhodanese-like domain APL_RS07955 PF02556 Preprotein translocase subunit SecB APL_RS07960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APL_RS07960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APL_RS07965 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS07965 PF06426 Serine acetyltransferase, N-terminal APL_RS07970 PF00009 Elongation factor Tu GTP binding domain APL_RS07970 PF03143 Elongation factor Tu C-terminal domain APL_RS07970 PF03144 Elongation factor Tu domain 2 APL_RS07995 PF00485 Phosphoribulokinase / Uridine kinase family APL_RS08000 PF08534 Redoxin APL_RS08005 PF03918 Cytochrome C biogenesis protein APL_RS08015 PF00994 Probable molybdopterin binding domain APL_RS08020 PF00543 Nitrogen regulatory protein P-II APL_RS08025 PF01252 APL_RS08025 APL_RS08030 PF02401 LytB protein APL_RS08035 PF03937 Flavinator of succinate dehydrogenase APL_RS08040 PF13460 NADH(P)-binding APL_RS08045 PF04055 Radical SAM superfamily APL_RS08045 PF06228 Haem utilisation ChuX/HutX APL_RS08050 PF00043 Glutathione S-transferase, C-terminal domain APL_RS08050 PF02798 Glutathione S-transferase, N-terminal domain APL_RS08055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APL_RS08055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APL_RS08065 PF02313 Fumarate reductase subunit D APL_RS08070 PF02300 Fumarate reductase subunit C APL_RS08075 PF13085 2Fe-2S iron-sulfur cluster binding domain APL_RS08075 PF13183 4Fe-4S dicluster domain APL_RS08080 PF00890 FAD binding domain APL_RS08080 PF02910 Fumarate reductase flavoprotein C-term APL_RS08085 PF00152 tRNA synthetases class II (D, K and N) APL_RS08090 PF01678 Diaminopimelate epimerase APL_RS08095 PF03605 APL_RS08095 APL_RS08100 PF02537 APL_RS08100 APL_RS08105 PF07690 Major Facilitator Superfamily APL_RS08110 PF03702 Uncharacterised protein family (UPF0075) APL_RS08115 PF01380 SIS domain APL_RS08120 PF06325 Ribosomal protein L11 methyltransferase (PrmA) APL_RS08125 PF13508 Acetyltransferase (GNAT) domain APL_RS08130 PF08681 Protein of unknown function (DUF1778) APL_RS08135 PF01523 Putative modulator of DNA gyrase APL_RS08140 PF01171 PP-loop family APL_RS08140 PF09179 TilS substrate binding domain APL_RS08140 PF11734 TilS substrate C-terminal domain APL_RS08145 PF00589 Phage integrase family APL_RS08145 PF02899 Phage integrase, N-terminal SAM-like domain APL_RS08200 PF03808 APL_RS08200 APL_RS08205 PF06899 APL_RS08205 APL_RS08210 PF07429 APL_RS08210 APL_RS08215 PF03063 Prismane/CO dehydrogenase family APL_RS08220 PF00111 2Fe-2S iron-sulfur cluster binding domain APL_RS08220 PF00175 Oxidoreductase NAD-binding domain APL_RS08220 PF00970 Oxidoreductase FAD-binding domain APL_RS08225 PF13440 APL_RS08225 APL_RS08230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APL_RS08235 PF00583 Acetyltransferase (GNAT) family APL_RS08240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APL_RS08240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APL_RS08240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APL_RS08245 PF02350 UDP-N-acetylglucosamine 2-epimerase APL_RS08255 PF00953 Glycosyl transferase family 4 APL_RS08260 PF00202 Aminotransferase class-III APL_RS08265 PF07690 Major Facilitator Superfamily APL_RS08270 PF03023 APL_RS08270 APL_RS08275 PF01649 Ribosomal protein S20 APL_RS08280 PF02080 TrkA-C domain APL_RS08280 PF02254 TrkA-N domain APL_RS08285 PF01029 NusB family APL_RS08285 PF01189 NOL1/NOP2/sun family APL_RS08290 PF00009 Elongation factor Tu GTP binding domain APL_RS08290 PF09106 Elongation factor SelB, winged helix APL_RS08290 PF09107 Elongation factor SelB, winged helix APL_RS08295 PF03841 L-seryl-tRNA selenium transferase APL_RS08295 PF12390 APL_RS08295 APL_RS08305 PF00258 Flavodoxin APL_RS08310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APL_RS08310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APL_RS08315 PF08450 SMP-30/Gluconolaconase/LRE-like region APL_RS08325 PF00593 TonB dependent receptor APL_RS08325 PF07715 TonB-dependent Receptor Plug Domain APL_RS08330 PF01298 Transferrin binding protein-like solute binding protein APL_RS08335 PF02472 Biopolymer transport protein ExbD/TolR APL_RS08340 PF01618 APL_RS08340 APL_RS08345 PF03544 Gram-negative bacterial TonB protein C-terminal APL_RS08350 PF03956 APL_RS08350 APL_RS08355 PF02615 Malate/L-lactate dehydrogenase APL_RS08360 PF02615 Malate/L-lactate dehydrogenase APL_RS08365 PF06821 Serine hydrolase APL_RS08375 PF00571 CBS domain APL_RS08375 PF01380 SIS domain APL_RS08380 PF02348 Cytidylyltransferase APL_RS08385 PF00793 DAHP synthetase I family APL_RS08390 PF04577 APL_RS08390 APL_RS08395 PF05159 APL_RS08395 APL_RS08400 PF00534 Glycosyl transferases group 1 APL_RS08405 PF02563 Polysaccharide biosynthesis/export protein APL_RS08410 PF02706 Chain length determinant protein APL_RS08415 PF01061 APL_RS08415 APL_RS08420 PF00005 ABC transporter APL_RS08425 PF00005 ABC transporter APL_RS08430 PF00551 Formyl transferase APL_RS08430 PF02911 Formyl transferase, C-terminal domain APL_RS08435 PF16868 APL_RS08435 APL_RS08440 PF01205 Uncharacterized protein family UPF0029 APL_RS08440 PF09186 Domain of unknown function (DUF1949) APL_RS08445 PF02386 Cation transport protein APL_RS08450 PF12724 Flavodoxin domain APL_RS08455 PF01741 Large-conductance mechanosensitive channel, MscL APL_RS08460 PF04055 Radical SAM superfamily APL_RS08465 PF03099 Biotin/lipoate A/B protein ligase family APL_RS08470 PF04359 Protein of unknown function (DUF493) APL_RS08475 PF00768 D-alanyl-D-alanine carboxypeptidase APL_RS08475 PF07943 Penicillin-binding protein 5, C-terminal domain APL_RS08480 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel APL_RS08485 PF01098 APL_RS08485 APL_RS08490 PF00905 Penicillin binding protein transpeptidase domain APL_RS08490 PF03717 Penicillin-binding Protein dimerisation domain APL_RS08495 PF02590 Predicted SPOUT methyltransferase APL_RS08500 PF02410 Oligomerisation domain APL_RS08505 PF00488 MutS domain V APL_RS08505 PF01624 MutS domain I APL_RS08505 PF05188 MutS domain II APL_RS08505 PF05190 MutS family domain IV APL_RS08505 PF05192 MutS domain III APL_RS08510 PF00005 ABC transporter APL_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS08520 PF03313 APL_RS08520 APL_RS08525 PF01814 Hemerythrin HHE cation binding domain APL_RS08530 PF00893 Small Multidrug Resistance protein APL_RS08535 PF04175 Protein of unknown function (DUF406) APL_RS08540 PF04391 APL_RS08540 APL_RS08545 PF03992 Antibiotic biosynthesis monooxygenase APL_RS08550 PF01774 UreD urease accessory protein APL_RS08555 PF02492 CobW/HypB/UreG, nucleotide-binding domain APL_RS08560 PF01730 UreF APL_RS08565 PF02814 UreE urease accessory protein, N-terminal domain APL_RS08565 PF05194 UreE urease accessory protein, C-terminal domain APL_RS08570 PF00043 Glutathione S-transferase, C-terminal domain APL_RS08570 PF13417 Glutathione S-transferase, N-terminal domain APL_RS08575 PF00449 Urease alpha-subunit, N-terminal domain APL_RS08575 PF01979 Amidohydrolase family APL_RS08580 PF00699 Urease beta subunit APL_RS08585 PF00547 Urease, gamma subunit APL_RS08590 PF03253 Urea transporter APL_RS08595 PF00005 ABC transporter APL_RS08600 PF02361 Cobalt transport protein APL_RS08605 PF01891 Cobalt uptake substrate-specific transmembrane region APL_RS08615 PF10670 APL_RS08615 APL_RS08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS08620 PF03466 LysR substrate binding domain APL_RS08625 PF14534 Domain of unknown function (DUF4440) APL_RS08630 PF02080 TrkA-C domain APL_RS08630 PF03600 Citrate transporter APL_RS08635 PF05068 Mannitol repressor APL_RS08640 PF01232 Mannitol dehydrogenase Rossmann domain APL_RS08640 PF08125 Mannitol dehydrogenase C-terminal domain APL_RS08645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APL_RS08645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APL_RS08645 PF02378 Phosphotransferase system, EIIC APL_RS08650 PF01380 SIS domain APL_RS08650 PF13522 Glutamine amidotransferase domain APL_RS08655 PF00455 APL_RS08655 APL_RS08655 PF08220 DeoR-like helix-turn-helix domain APL_RS08660 PF05433 APL_RS08660 APL_RS08665 PF13692 Glycosyl transferases group 1 APL_RS08675 PF00919 Uncharacterized protein family UPF0004 APL_RS08675 PF04055 Radical SAM superfamily APL_RS08680 PF01048 Phosphorylase superfamily APL_RS08690 PF04102 SlyX APL_RS08695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APL_RS08695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APL_RS08700 PF08348 APL_RS08700 APL_RS08700 PF13309 APL_RS08700 APL_RS08705 PF02635 DsrE/DsrF-like family APL_RS08710 PF02635 DsrE/DsrF-like family APL_RS08715 PF04077 DsrH like protein APL_RS08745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APL_RS08750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APL_RS08750 PF02874 ATP synthase alpha/beta family, beta-barrel domain APL_RS08755 PF00231 ATP synthase APL_RS08760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APL_RS08760 PF00306 ATP synthase alpha/beta chain, C terminal domain APL_RS08760 PF02874 ATP synthase alpha/beta family, beta-barrel domain APL_RS08765 PF00213 ATP synthase delta (OSCP) subunit APL_RS08770 PF00430 ATP synthase B/B' CF(0) APL_RS08775 PF00137 ATP synthase subunit C APL_RS08780 PF00119 ATP synthase A chain APL_RS08785 PF03899 APL_RS08785 APL_RS08790 PF02527 rRNA small subunit methyltransferase G APL_RS08795 PF01134 Glucose inhibited division protein A APL_RS08795 PF13932 GidA associated domain 3 APL_RS08800 PF08282 haloacid dehalogenase-like hydrolase APL_RS08805 PF00497 Bacterial extracellular solute-binding proteins, family 3 APL_RS08810 PF02810 SEC-C motif APL_RS08820 PF03613 APL_RS08820 APL_RS08825 PF03609 APL_RS08825 APL_RS08830 PF03610 PTS system fructose IIA component APL_RS08830 PF03830 PTS system sorbose subfamily IIB component APL_RS08835 PF00665 Integrase core domain APL_RS08835 PF13276 APL_RS08835 APL_RS08840 PF13518 Helix-turn-helix domain APL_RS08845 PF02447 APL_RS08845 APL_RS08850 PF01202 Shikimate kinase APL_RS08855 PF00356 Bacterial regulatory proteins, lacI family APL_RS08855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APL_RS08860 PF00356 Bacterial regulatory proteins, lacI family APL_RS08860 PF13377 Periplasmic binding protein-like domain APL_RS08865 PF05025 RbsD / FucU transport protein family APL_RS08870 PF00005 ABC transporter APL_RS08875 PF02653 APL_RS08875 APL_RS08880 PF13407 Periplasmic binding protein domain APL_RS08885 PF00294 pfkB family carbohydrate kinase APL_RS08890 PF00384 Molybdopterin oxidoreductase APL_RS08890 PF01568 Molydopterin dinucleotide binding domain APL_RS08890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APL_RS08895 PF12800 4Fe-4S binding domain APL_RS08895 PF13247 4Fe-4S dicluster domain APL_RS08900 PF04976 APL_RS08900 APL_RS08905 PF02613 Nitrate reductase delta subunit APL_RS08910 PF00037 4Fe-4S binding domain APL_RS08910 PF12800 4Fe-4S binding domain APL_RS08910 PF13187 4Fe-4S dicluster domain APL_RS08915 PF01381 Helix-turn-helix APL_RS08920 PF07804 HipA-like C-terminal domain APL_RS08920 PF07805 HipA-like N-terminal domain APL_RS08925 PF10592 APL_RS08925 APL_RS08930 PF02769 AIR synthase related protein, C-terminal domain APL_RS08930 PF13507 CobB/CobQ-like glutamine amidotransferase domain APL_RS08935 PF00455 APL_RS08935 APL_RS08935 PF08220 DeoR-like helix-turn-helix domain APL_RS08940 PF02952 L-fucose isomerase, C-terminal domain APL_RS08940 PF07881 L-fucose isomerase, first N-terminal domain APL_RS08940 PF07882 L-fucose isomerase, second N-terminal domain APL_RS08945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APL_RS08945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APL_RS08950 PF05025 RbsD / FucU transport protein family APL_RS08955 PF00596 Class II Aldolase and Adducin N-terminal domain APL_RS08960 PF07690 Major Facilitator Superfamily APL_RS08965 PF00465 Iron-containing alcohol dehydrogenase APL_RS08970 PF07274 APL_RS08970 APL_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS08985 PF00005 ABC transporter APL_RS08990 PF00497 Bacterial extracellular solute-binding proteins, family 3 APL_RS08995 PF05159 APL_RS08995 APL_RS09000 PF05159 APL_RS09000 APL_RS09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APL_RS09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APL_RS09020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APL_RS09020 PF03611 APL_RS09020 APL_RS09025 PF13483 Beta-lactamase superfamily domain APL_RS09030 PF00455 APL_RS09030 APL_RS09030 PF08220 DeoR-like helix-turn-helix domain APL_RS09035 PF01261 Xylose isomerase-like TIM barrel APL_RS09040 PF00596 Class II Aldolase and Adducin N-terminal domain APL_RS09045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APL_RS09045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APL_RS09060 PF08794 Lipoprotein GNA1870 C terminal like APL_RS09065 PF14559 Tetratricopeptide repeat APL_RS09070 PF04575 APL_RS09070 APL_RS09075 PF01370 NAD dependent epimerase/dehydratase family APL_RS09080 PF01327 Polypeptide deformylase APL_RS09085 PF02481 DNA recombination-mediator protein A APL_RS09090 PF03169 APL_RS09090 APL_RS09095 PF03611 APL_RS09095 APL_RS09100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APL_RS09105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APL_RS09110 PF00467 KOW motif APL_RS09110 PF02357 Transcription termination factor nusG APL_RS09115 PF00298 Ribosomal protein L11, RNA binding domain APL_RS09115 PF03946 Ribosomal protein L11, N-terminal domain APL_RS09120 PF00687 Ribosomal protein L1p/L10e family APL_RS09125 PF00466 Ribosomal protein L10 APL_RS09130 PF00542 Ribosomal protein L7/L12 C-terminal domain APL_RS09130 PF16320 APL_RS09130 APL_RS09140 PF07804 HipA-like C-terminal domain APL_RS09140 PF07805 HipA-like N-terminal domain APL_RS09140 PF13657 HipA N-terminal domain APL_RS09165 PF00872 APL_RS09165 APL_RS09175 PF00562 RNA polymerase Rpb2, domain 6 APL_RS09175 PF04560 RNA polymerase Rpb2, domain 7 APL_RS09175 PF04561 RNA polymerase Rpb2, domain 2 APL_RS09175 PF04563 RNA polymerase beta subunit APL_RS09175 PF04565 RNA polymerase Rpb2, domain 3 APL_RS09175 PF10385 RNA polymerase beta subunit external 1 domain APL_RS09180 PF00623 RNA polymerase Rpb1, domain 2 APL_RS09180 PF04983 RNA polymerase Rpb1, domain 3 APL_RS09180 PF04997 RNA polymerase Rpb1, domain 1 APL_RS09180 PF04998 RNA polymerase Rpb1, domain 5 APL_RS09180 PF05000 RNA polymerase Rpb1, domain 4 APL_RS09190 PF04014 Antidote-toxin recognition MazE APL_RS09195 PF01850 PIN domain APL_RS09200 PF04224 APL_RS09200 APL_RS09205 PF09968 Uncharacterized protein domain (DUF2202) APL_RS09215 PF00004 ATPase family associated with various cellular activities (AAA) APL_RS09215 PF07724 AAA domain (Cdc48 subfamily) APL_RS09215 PF10431 C-terminal, D2-small domain, of ClpB protein APL_RS09220 PF00227 Proteasome subunit APL_RS09225 PF03749 Sugar fermentation stimulation protein APL_RS09230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APL_RS09235 PF00633 Helix-hairpin-helix motif APL_RS09235 PF00730 HhH-GPD superfamily base excision DNA repair protein APL_RS09235 PF10576 Iron-sulfur binding domain of endonuclease III APL_RS09235 PF14815 NUDIX domain APL_RS09240 PF04362 Bacterial Fe(2+) trafficking APL_RS09245 PF01464 Transglycosylase SLT domain APL_RS09245 PF11873 Domain of unknown function (DUF3393) APL_RS09270 PF00448 SRP54-type protein, GTPase domain APL_RS09270 PF02881 SRP54-type protein, helical bundle domain APL_RS09270 PF02978 Signal peptide binding domain APL_RS09275 PF00149 Calcineurin-like phosphoesterase APL_RS09275 PF02872 5'-nucleotidase, C-terminal domain APL_RS09280 PF01266 FAD dependent oxidoreductase APL_RS09280 PF01494 FAD binding domain APL_RS09285 PF01381 Helix-turn-helix APL_RS09290 PF05973 APL_RS09290 APL_RS09295 PF01078 Magnesium chelatase, subunit ChlI APL_RS09295 PF13335 APL_RS09295 APL_RS09295 PF13541 Subunit ChlI of Mg-chelatase APL_RS09300 PF01298 Transferrin binding protein-like solute binding protein APL_RS09305 PF00561 alpha/beta hydrolase fold APL_RS09310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APL_RS09310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APL_RS09310 PF16582 APL_RS09310 APL_RS09315 PF13472 GDSL-like Lipase/Acylhydrolase family APL_RS09320 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APL_RS09325 PF00480 ROK family APL_RS09330 PF00701 Dihydrodipicolinate synthetase family APL_RS09335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APL_RS09340 PF01979 Amidohydrolase family APL_RS09345 PF00206 Lyase APL_RS09345 PF10415 Fumarase C C-terminus APL_RS09350 PF04993 TfoX N-terminal domain APL_RS09350 PF04994 TfoX C-terminal domain APL_RS09355 PF00338 Ribosomal protein S10p/S20e APL_RS09360 PF00297 Ribosomal protein L3 APL_RS09365 PF00573 Ribosomal protein L4/L1 family APL_RS09370 PF00276 Ribosomal protein L23 APL_RS09375 PF00181 Ribosomal Proteins L2, RNA binding domain APL_RS09375 PF03947 Ribosomal Proteins L2, C-terminal domain APL_RS09380 PF00203 Ribosomal protein S19 APL_RS09385 PF00237 Ribosomal protein L22p/L17e APL_RS09390 PF00189 Ribosomal protein S3, C-terminal domain APL_RS09390 PF07650 KH domain APL_RS09395 PF00252 Ribosomal protein L16p/L10e APL_RS09400 PF00831 Ribosomal L29 protein APL_RS09405 PF00366 Ribosomal protein S17 APL_RS09410 PF00238 Ribosomal protein L14p/L23e APL_RS09415 PF00467 KOW motif APL_RS09415 PF17136 APL_RS09415 APL_RS09420 PF00281 Ribosomal protein L5 APL_RS09420 PF00673 ribosomal L5P family C-terminus APL_RS09425 PF00253 Ribosomal protein S14p/S29e APL_RS09430 PF00410 Ribosomal protein S8 APL_RS09435 PF00347 Ribosomal protein L6 APL_RS09440 PF00861 Ribosomal L18p/L5e family APL_RS09445 PF00333 Ribosomal protein S5, N-terminal domain APL_RS09445 PF03719 Ribosomal protein S5, C-terminal domain APL_RS09450 PF00327 Ribosomal protein L30p/L7e APL_RS09455 PF00828 Ribosomal protein L18e/L15 APL_RS09460 PF00344 SecY translocase APL_RS09465 PF00444 Ribosomal protein L36 APL_RS09470 PF00416 Ribosomal protein S13/S18 APL_RS09475 PF00411 Ribosomal protein S11 APL_RS09480 PF00163 Ribosomal protein S4/S9 N-terminal domain APL_RS09480 PF01479 S4 domain APL_RS09485 PF01000 RNA polymerase Rpb3/RpoA insert domain APL_RS09485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APL_RS09485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APL_RS09495 PF00886 Ribosomal protein S16 APL_RS09500 PF01782 RimM N-terminal domain APL_RS09500 PF05239 PRC-barrel domain APL_RS09505 PF01746 tRNA (Guanine-1)-methyltransferase APL_RS09510 PF01245 Ribosomal protein L19 APL_RS09515 PF08007 Cupin superfamily protein APL_RS09520 PF01497 Periplasmic binding protein APL_RS09525 PF01032 FecCD transport family APL_RS09530 PF00005 ABC transporter APL_RS09535 PF00127 Copper binding proteins, plastocyanin/azurin family APL_RS09540 PF01497 Periplasmic binding protein APL_RS09545 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APL_RS09550 PF02613 Nitrate reductase delta subunit APL_RS09555 PF00384 Molybdopterin oxidoreductase APL_RS09555 PF01568 Molydopterin dinucleotide binding domain APL_RS09565 PF02091 Glycyl-tRNA synthetase alpha subunit APL_RS09570 PF04480 Protein of unknown function (DUF559) APL_RS09580 PF02092 APL_RS09580 APL_RS09580 PF05746 DALR anticodon binding domain APL_RS09590 PF00589 Phage integrase family APL_RS09590 PF02899 Phage integrase, N-terminal SAM-like domain APL_RS09595 PF04304 APL_RS09595 APL_RS09600 PF00535 Glycosyl transferase family 2 APL_RS09605 PF00149 Calcineurin-like phosphoesterase APL_RS09610 PF07509 APL_RS09610 APL_RS09615 PF01026 TatD related DNase APL_RS09635 PF06629 APL_RS09635 APL_RS09640 PF09115 DNA polymerase III, delta subunit, C terminal APL_RS09640 PF13177 DNA polymerase III, delta subunit APL_RS09645 PF02223 Thymidylate kinase APL_RS09650 PF02618 YceG-like family APL_RS09670 PF00550 Phosphopantetheine attachment site APL_RS09675 PF00834 Ribulose-phosphate 3 epimerase family APL_RS09680 PF01197 Ribosomal protein L31 APL_RS09685 PF00444 Ribosomal protein L36 APL_RS09690 PF00905 Penicillin binding protein transpeptidase domain APL_RS09690 PF00912 Transglycosylase APL_RS09690 PF14814 Bifunctional transglycosylase second domain APL_RS09695 PF00378 Enoyl-CoA hydratase/isomerase family APL_RS09700 PF02824 TGS domain APL_RS09700 PF04607 Region found in RelA / SpoT proteins APL_RS09700 PF13291 ACT domain APL_RS09700 PF13328 HD domain APL_RS09705 PF01192 RNA polymerase Rpb6 APL_RS09710 PF00270 DEAD/DEAH box helicase APL_RS09710 PF00271 Helicase conserved C-terminal domain APL_RS09710 PF17191 APL_RS09710 APL_RS09715 PF01850 PIN domain APL_RS09720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system APL_RS09725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APL_RS09725 PF03129 Anticodon binding domain APL_RS09725 PF04073 Aminoacyl-tRNA editing domain APL_RS09735 PF04542 Sigma-70 region 2 APL_RS09735 PF08281 Sigma-70, region 4 APL_RS09740 PF00174 Oxidoreductase molybdopterin binding domain APL_RS09745 PF01794 APL_RS09745 APL_RS09750 PF00140 Sigma-70 factor, region 1 APL_RS09750 PF04542 Sigma-70 region 2 APL_RS09750 PF04545 Sigma-70, region 4 APL_RS09755 PF07690 Major Facilitator Superfamily APL_RS09770 PF03590 Aspartate-ammonia ligase APL_RS09775 PF01037 AsnC family APL_RS09775 PF13404 AsnC-type helix-turn-helix domain APL_RS09780 PF01048 Phosphorylase superfamily APL_RS09785 PF04345 Chorismate lyase APL_RS09790 PF01177 Asp/Glu/Hydantoin racemase APL_RS09815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APL_RS09815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APL_RS09820 PF00175 Oxidoreductase NAD-binding domain APL_RS09820 PF00258 Flavodoxin APL_RS09820 PF00667 FAD binding domain APL_RS09825 PF00009 Elongation factor Tu GTP binding domain APL_RS09825 PF03144 Elongation factor Tu domain 2 APL_RS09830 PF13531 Bacterial extracellular solute-binding protein APL_RS09835 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS09840 PF00528 Binding-protein-dependent transport system inner membrane component APL_RS09845 PF00005 ABC transporter APL_RS09845 PF12857 APL_RS09845 APL_RS09850 PF01070 FMN-dependent dehydrogenase APL_RS09855 PF02237 Biotin protein ligase C terminal domain APL_RS09855 PF03099 Biotin/lipoate A/B protein ligase family APL_RS09860 PF01565 FAD binding domain APL_RS09860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APL_RS09865 PF00691 OmpA family APL_RS09865 PF01389 OmpA-like transmembrane domain APL_RS09870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APL_RS09870 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain APL_RS09875 PF04403 APL_RS09875 APL_RS09880 PF01841 Transglutaminase-like superfamily APL_RS09885 PF02411 APL_RS09885 APL_RS09890 PF00403 Heavy-metal-associated domain APL_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APL_RS09900 PF03466 LysR substrate binding domain APL_RS09905 PF00132 Bacterial transferase hexapeptide (six repeats) APL_RS09905 PF14602 Hexapeptide repeat of succinyl-transferase APL_RS09905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APL_RS09910 PF01220 Dehydroquinase class II APL_RS09915 PF04488 Glycosyltransferase sugar-binding region containing DXD motif APL_RS09920 PF00364 Biotin-requiring enzyme APL_RS09925 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain APL_RS09925 PF02785 Biotin carboxylase C-terminal domain APL_RS09925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APL_RS09930 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APL_RS09930 PF12804 MobA-like NTP transferase domain APL_RS09935 PF06288 Protein of unknown function (DUF1040) APL_RS09940 PF01323 DSBA-like thioredoxin domain APL_RS09945 PF00872 APL_RS09945 APL_RS09950 PF05036 Sporulation related domain APL_RS09955 PF04445 Putative SAM-dependent methyltransferase APL_RS09960 PF02557 D-alanyl-D-alanine carboxypeptidase APL_RS09965 PF01546 Peptidase family M20/M25/M40 APL_RS09965 PF07687 Peptidase dimerisation domain APL_RS09970 PF03960 ArsC family APL_RS09980 PF00809 Pterin binding enzyme APL_RS09985 PF00849 RNA pseudouridylate synthase APL_RS09985 PF01479 S4 domain APL_RS09995 PF00924 Mechanosensitive ion channel APL_RS10000 PF13535 ATP-grasp domain APL_RS10005 PF00756 Putative esterase APL_RS10010 PF00675 Insulinase (Peptidase family M16) APL_RS10010 PF05193 Peptidase M16 inactive domain APL_RS10010 PF16187 APL_RS10010 APL_RS10015 PF04257 Exodeoxyribonuclease V, gamma subunit APL_RS10025 PF10833 APL_RS10025 APL_RS10040 PF07977 FabA-like domain APL_RS10045 PF05362 Lon protease (S16) C-terminal proteolytic domain APL_RS10045 PF13654 AAA domain APL_RS10050 PF06303 Organiser of macrodomain of Terminus of chromosome APL_RS10060 PF13419 Haloacid dehalogenase-like hydrolase APL_RS10070 PF01790 APL_RS10070 APL_RS10075 PF01925 APL_RS10075 APL_RS10080 PF00293 NUDIX domain APL_RS10085 PF01435 Peptidase family M48 APL_RS10090 PF00719 Inorganic pyrophosphatase APL_RS10095 PF05175 Methyltransferase small domain APL_RS10100 PF03737 Demethylmenaquinone methyltransferase APL_RS10105 PF01226 Formate/nitrite transporter APL_RS10110 PF00756 Putative esterase APL_RS10115 PF00872 APL_RS10115 APL_RS10120 PF00226 DnaJ domain APL_RS10120 PF00684 DnaJ central domain APL_RS10120 PF01556 DnaJ C terminal domain APL_RS10125 PF00012 Hsp70 protein APL_RS10130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APL_RS10130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APL_RS10140 PF13407 Periplasmic binding protein domain APL_RS10145 PF00005 ABC transporter APL_RS10150 PF02653 APL_RS10150 APL_RS10155 PF12833 Helix-turn-helix domain APL_RS10155 PF13377 Periplasmic binding protein-like domain APL_RS10160 PF01431 Peptidase family M13 APL_RS10160 PF05649 Peptidase family M13 APL_RS10165 PF10571 APL_RS10165 APL_RS10170 PF00474 Sodium:solute symporter family APL_RS10175 PF06196 APL_RS10175 APL_RS10180 PF01340 Met Apo-repressor, MetJ APL_RS10185 PF04333 APL_RS10185 APL_RS10190 PF01263 Aldose 1-epimerase APL_RS10195 PF10136 APL_RS10195 APL_RS10205 PF01522 Polysaccharide deacetylase APL_RS10205 PF14883 Hypothetical glycosyl hydrolase family 13 APL_RS10210 PF13641 Glycosyltransferase like family 2 APL_RS10220 PF00121 Triosephosphate isomerase APL_RS10225 PF01142 tRNA pseudouridine synthase D (TruD) APL_RS10230 PF01975 Survival protein SurE APL_RS10235 PF09335 APL_RS10235 APL_RS10240 PF01476 LysM domain APL_RS10250 PF01476 LysM domain APL_RS10250 PF01551 Peptidase family M23 APL_RS10255 PF03352 Methyladenine glycosylase APL_RS10265 PF07670 Nucleoside recognition APL_RS10275 PF00762 Ferrochelatase APL_RS10280 PF00468 Ribosomal protein L34 APL_RS10285 PF00825 Ribonuclease P APL_RS10290 PF01809 APL_RS10290 APL_RS10295 PF00120 Glutamine synthetase, catalytic domain APL_RS10295 PF03951 Glutamine synthetase, beta-Grasp domain APL_RS10300 PF00149 Calcineurin-like phosphoesterase APL_RS10305 PF00293 NUDIX domain APL_RS10310 PF06146 APL_RS10310 APL_RS10315 PF01648 4'-phosphopantetheinyl transferase superfamily APL_RS10320 PF00892 EamA-like transporter family APL_RS10325 PF06965 Na+/H+ antiporter 1 APL_RS10330 PF00652 Ricin-type beta-trefoil lectin domain APL_RS10335 PF02580 D-Tyr-tRNA(Tyr) deacylase APL_RS10340 PF03631 APL_RS10340 APL_RS10345 PF00171 Aldehyde dehydrogenase family APL_RS10350 PF07715 TonB-dependent Receptor Plug Domain APL_RS10375 PF01119 DNA mismatch repair protein, C-terminal domain APL_RS10375 PF08676 MutL C terminal dimerisation domain APL_RS10375 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APL_RS10380 PF00107 Zinc-binding dehydrogenase APL_RS10380 PF08240 Alcohol dehydrogenase GroES-like domain APL_RS10385 PF01715 IPP transferase APL_RS10395 PF01926 50S ribosome-binding GTPase APL_RS10395 PF13167 APL_RS10395 APL_RS10395 PF16360 APL_RS10395 APL_RS10400 PF03641 Possible lysine decarboxylase APL_RS10405 PF03819 MazG nucleotide pyrophosphohydrolase domain APL_RS10410 PF00027 Cyclic nucleotide-binding domain APL_RS10410 PF00325 Bacterial regulatory proteins, crp family APL_RS10415 PF06794 Uncharacterised protein family (UPF0270) APL_RS10420 PF00440 Bacterial regulatory proteins, tetR family APL_RS10425 PF00692 dUTPase APL_RS10430 PF02441 Flavoprotein APL_RS10430 PF04127 DNA / pantothenate metabolism flavoprotein APL_RS10435 PF04002 RadC-like JAB domain APL_RS10440 PF00830 Ribosomal L28 family APL_RS10445 PF00471 Ribosomal protein L33 APL_RS10460 PF00202 Aminotransferase class-III APL_RS10465 PF00282 Pyridoxal-dependent decarboxylase conserved domain APL_RS10470 PF01206 Sulfurtransferase TusA APL_RS10475 PF04143 APL_RS10475 APL_RS10480 PF04219 APL_RS10480 APL_RS10485 PF05958 tRNA (Uracil-5-)-methyltransferase APL_RS10500 PF00872 APL_RS10500 APL_RS10505 PF01544 CorA-like Mg2+ transporter protein APL_RS10510 PF01209 ubiE/COQ5 methyltransferase family APL_RS10515 PF02036 SCP-2 sterol transfer family APL_RS10520 PF03109 APL_RS10520 APL_RS10525 PF02416 mttA/Hcf106 family APL_RS10535 PF00902 Sec-independent protein translocase protein (TatC) APL_RS10540 PF00490 Delta-aminolevulinic acid dehydratase APL_RS10550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APL_RS10550 PF06827 Zinc finger found in FPG and IleRS APL_RS10550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APL_RS10555 PF05525 APL_RS10555 APL_RS10560 PF13561 Enoyl-(Acyl carrier protein) reductase APL_RS10565 PF00698 Acyl transferase domain APL_RS10570 PF02677 APL_RS10570 APL_RS10575 PF00348 Polyprenyl synthetase APL_RS10580 PF01734 Patatin-like phospholipase APL_RS10585 PF03358 NADPH-dependent FMN reductase APL_RS10590 PF07681 APL_RS10590 APL_RS10595 PF00829 Ribosomal prokaryotic L21 protein APL_RS10600 PF01016 Ribosomal L27 protein APL_RS10605 PF00892 EamA-like transporter family APL_RS10610 PF04575 APL_RS10610 APL_RS10610 PF13432 Tetratricopeptide repeat APL_RS10615 PF08282 haloacid dehalogenase-like hydrolase APL_RS10620 PF00156 Phosphoribosyl transferase domain APL_RS10625 PF05175 Methyltransferase small domain APL_RS10625 PF08468 Methyltransferase small domain N-terminal APL_RS10630 PF03603 DNA polymerase III psi subunit APL_RS10635 PF00583 Acetyltransferase (GNAT) family APL_RS10640 PF00270 DEAD/DEAH box helicase APL_RS10640 PF00271 Helicase conserved C-terminal domain APL_RS10645 PF01243 Pyridoxamine 5'-phosphate oxidase APL_RS10645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APL_RS10650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APL_RS10655 PF00171 Aldehyde dehydrogenase family APL_RS10660 PF01184 APL_RS10660 APL_RS10665 PF00005 ABC transporter APL_RS10670 PF01497 Periplasmic binding protein APL_RS10675 PF01032 FecCD transport family APL_RS10680 PF00593 TonB dependent receptor APL_RS10680 PF07715 TonB-dependent Receptor Plug Domain APL_RS10685 PF10084 APL_RS10685 APL_RS10690 PF01259 SAICAR synthetase APL_RS10695 PF01634 ATP phosphoribosyltransferase APL_RS10695 PF08029 HisG, C-terminal domain APL_RS10700 PF00815 Histidinol dehydrogenase APL_RS10705 PF00155 Aminotransferase class I and II APL_RS10710 PF01797 Transposase IS200 like APL_RS10715 PF00475 Imidazoleglycerol-phosphate dehydratase APL_RS10720 PF00300 Histidine phosphatase superfamily (branch 1) APL_RS10725 PF06250 APL_RS10725 APL_RS10730 PF00117 Glutamine amidotransferase class-I APL_RS10735 PF00977 Histidine biosynthesis protein APL_RS10740 PF00977 Histidine biosynthesis protein APL_RS10745 PF01502 Phosphoribosyl-AMP cyclohydrolase APL_RS10745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APL_RS10750 PF02592 APL_RS10750 APL_RS10755 PF00557 Metallopeptidase family M24 APL_RS10760 PF14595 Thioredoxin APL_RS10765 PF00356 Bacterial regulatory proteins, lacI family APL_RS10765 PF13407 Periplasmic binding protein domain APL_RS10770 PF00251 Glycosyl hydrolases family 32 N-terminal domain APL_RS10770 PF08244 Glycosyl hydrolases family 32 C terminal APL_RS10775 PF00294 pfkB family carbohydrate kinase APL_RS10780 PF00394 Multicopper oxidase APL_RS10780 PF07732 Multicopper oxidase APL_RS10785 PF02687 APL_RS10785 APL_RS10785 PF12704 MacB-like periplasmic core domain APL_RS10790 PF00005 ABC transporter APL_RS10795 PF02687 APL_RS10795 APL_RS10795 PF12704 MacB-like periplasmic core domain APL_RS10800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APL_RS10800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APL_RS10805 PF00793 DAHP synthetase I family APL_RS10810 PF13369 APL_RS10810 APL_RS10810 PF13371 Tetratricopeptide repeat APL_RS10815 PF13847 Methyltransferase domain APL_RS10825 PF00472 RF-1 domain APL_RS10825 PF03462 PCRF domain APL_RS10830 PF00581 Rhodanese-like domain APL_RS10835 PF04143 APL_RS10835 APL_RS10845 PF03895 YadA-like C-terminal region APL_RS10845 PF05662 Coiled stalk of trimeric autotransporter adhesin APL_RS10850 PF00593 TonB dependent receptor APL_RS10855 PF05658 Head domain of trimeric autotransporter adhesin APL_RS10855 PF05662 Coiled stalk of trimeric autotransporter adhesin APL_RS10855 PF13018 APL_RS10855 APL_RS10860 PF03895 YadA-like C-terminal region APL_RS10860 PF05662 Coiled stalk of trimeric autotransporter adhesin APL_RS10865 PF01757 APL_RS10865 APL_RS10870 PF00593 TonB dependent receptor APL_RS10875 PF00593 TonB dependent receptor