APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 6.9E-50 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Gene3D G3DSA:3.40.50.970 2 176 1.5E-74 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.7E-60 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Gene3D G3DSA:3.40.50.1220 190 356 5.6E-66 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 PANTHER PTHR18968:SF116 3 572 0.0 T 21-04-2016 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Gene3D G3DSA:3.40.50.970 357 556 6.2E-76 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 PANTHER PTHR18968 3 572 0.0 T 21-04-2016 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 SUPERFAMILY SSF52518 372 567 4.34E-69 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 SUPERFAMILY SSF52467 189 362 5.97E-62 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.8E-44 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 9.4E-277 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS03785 8f5f56e6757effa487ad97337ef55e85 574 SUPERFAMILY SSF52518 3 177 2.14E-64 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS03970 2fb65414ac513b219857dd1a0d94ef2e 251 Gene3D G3DSA:3.40.50.150 20 238 3.4E-45 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03970 2fb65414ac513b219857dd1a0d94ef2e 251 PANTHER PTHR10108:SF805 12 211 2.8E-51 T 21-04-2016 APL_RS03970 2fb65414ac513b219857dd1a0d94ef2e 251 Pfam PF13649 Methyltransferase domain 42 139 6.6E-22 T 21-04-2016 APL_RS03970 2fb65414ac513b219857dd1a0d94ef2e 251 PANTHER PTHR10108 12 211 2.8E-51 T 21-04-2016 APL_RS03970 2fb65414ac513b219857dd1a0d94ef2e 251 SUPERFAMILY SSF53335 12 238 6.14E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04990 abc46c8ab5aa80e9a6ef598310492b69 190 Pfam PF03412 Peptidase C39 family 4 129 1.9E-29 T 21-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APL_RS04990 abc46c8ab5aa80e9a6ef598310492b69 190 Gene3D G3DSA:3.90.70.10 5 129 1.3E-27 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 294 1.3E-10 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624:SF67 476 531 0.0 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624:SF67 361 448 0.0 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624:SF67 549 765 0.0 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624:SF67 73 292 0.0 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624:SF67 784 866 0.0 T 21-04-2016 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 883 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PIRSF PIRSF000156 1 884 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 SUPERFAMILY SSF52518 470 696 1.77E-91 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 SUPERFAMILY SSF52518 56 463 3.04E-132 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 Gene3D G3DSA:3.40.50.970 470 701 2.1E-113 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624 476 531 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624 361 448 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624 549 765 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624 73 292 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 PANTHER PTHR11624 784 866 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 Gene3D G3DSA:3.40.50.920 703 883 1.3E-72 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 SUPERFAMILY SSF52922 698 883 1.22E-59 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS04045 9e9015c83594e2f23565d994a4226b85 884 Gene3D G3DSA:3.40.50.970 56 464 5.9E-148 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 PANTHER PTHR24220 8 330 7.2E-209 T 21-04-2016 APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 Gene3D G3DSA:3.40.50.300 3 236 4.3E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 SUPERFAMILY SSF52540 7 243 8.87E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 SMART SM00382 31 214 2.7E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 Pfam PF00005 ABC transporter 23 164 3.5E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 Pfam PF08402 TOBE domain 276 329 2.0E-5 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 SUPERFAMILY SSF50331 242 347 6.24E-14 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 PANTHER PTHR24220:SF536 8 330 7.2E-209 T 21-04-2016 APL_RS07645 fdeb1081f9190bef29c6fa13554d2d49 349 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 PANTHER PTHR24220:SF470 3 215 7.5E-109 T 21-04-2016 APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 PANTHER PTHR24220 3 215 7.5E-109 T 21-04-2016 APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 4.2E-84 T 21-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 SMART SM00382 27 214 7.7E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 Gene3D G3DSA:3.40.50.300 1 215 2.6E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 SUPERFAMILY SSF52540 1 215 7.98E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07080 219f783aca67cb4f5065d522da966f1c 217 Pfam PF00005 ABC transporter 18 165 1.1E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Gene3D G3DSA:3.40.309.10 800 988 1.9E-42 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 PANTHER PTHR11699 557 1006 6.8E-162 T 21-04-2016 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 517 1010 1.7E-221 T 21-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 SUPERFAMILY SSF53720 558 1010 1.17E-123 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 68 178 4.3E-46 T 21-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 SUPERFAMILY SSF81935 15 180 4.84E-61 T 21-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Gene3D G3DSA:1.20.5.550 14 60 5.2E-8 T 21-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Gene3D G3DSA:1.10.2060.10 61 179 9.1E-52 T 21-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Pfam PF01619 Proline dehydrogenase 189 481 8.1E-95 T 21-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 SUPERFAMILY SSF51730 181 523 8.63E-115 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 812 823 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 PANTHER PTHR11699:SF18 557 1006 6.8E-162 T 21-04-2016 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Pfam PF00171 Aldehyde dehydrogenase family 567 1007 2.8E-118 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 PIRSF PIRSF000197 2 1200 0.0 T 21-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Gene3D G3DSA:3.20.20.220 180 522 1.0E-107 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like APL_RS00555 7ef79d326317e82696995c55784cf39b 1201 Gene3D G3DSA:3.40.605.10 558 799 3.1E-67 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 20 566 6.8E-280 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 79 139 3.2E-11 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 361 425 1.5E-10 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 PANTHER PTHR11493 12 562 2.3E-232 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 PANTHER PTHR11493:SF47 12 562 2.3E-232 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Gene3D G3DSA:3.30.413.10 438 565 2.4E-29 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Gene3D G3DSA:3.30.413.10 151 348 4.4E-62 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 11 578 56.787 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 SUPERFAMILY SSF55124 15 146 6.05E-24 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 SUPERFAMILY SSF56014 151 352 2.62E-50 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 SUPERFAMILY SSF56014 435 568 2.88E-32 T 21-04-2016 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 1.0E-8 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 PRINTS PR00397 Sirohaem Fe-binding site signature 437 455 1.0E-8 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 175 339 1.5E-43 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 483 549 3.6 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Gene3D G3DSA:3.90.480.10 350 430 4.4E-56 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 Gene3D G3DSA:3.90.480.10 76 147 4.4E-56 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09815 a8bb1738cfd7e9a0f6f301d9cf33c03d 588 SUPERFAMILY SSF55124 354 429 1.54E-17 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 PANTHER PTHR11761 1 123 4.3E-77 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 Gene3D G3DSA:2.40.150.20 1 123 1.3E-55 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 SUPERFAMILY SSF50193 2 122 2.62E-51 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.019 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 SMART SM01374 1 123 2.5E-86 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 21-04-2016 IPR019972 Ribosomal protein L14P, conserved site APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 6.1E-60 T 21-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS09410 93405f44c6e7e1f905093bcc9e58ae3f 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.9E-55 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 Gene3D G3DSA:3.60.21.10 17 321 1.5E-82 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 Pfam PF00149 Calcineurin-like phosphoesterase 25 249 1.9E-16 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PANTHER PTHR11575 441 554 7.7E-94 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PANTHER PTHR11575 7 425 7.7E-94 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 Gene3D G3DSA:3.90.780.10 326 551 1.4E-24 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 Pfam PF02872 5'-nucleotidase, C-terminal domain 325 492 8.9E-29 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PANTHER PTHR11575:SF27 441 554 7.7E-94 T 21-04-2016 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PANTHER PTHR11575:SF27 7 425 7.7E-94 T 21-04-2016 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PRINTS PR01607 Apyrase family signature 205 222 1.7E-13 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PRINTS PR01607 Apyrase family signature 259 279 1.7E-13 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PRINTS PR01607 Apyrase family signature 22 40 1.7E-13 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 PRINTS PR01607 Apyrase family signature 232 255 1.7E-13 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 SUPERFAMILY SSF55816 333 537 1.2E-25 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS09275 bf06f443c2566011308b8efa60aa32df 554 SUPERFAMILY SSF56300 18 321 5.78E-78 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 Gene3D G3DSA:3.30.70.250 126 199 5.5E-28 T 21-04-2016 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 7.7E-38 T 21-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 SUPERFAMILY SSF55048 131 196 2.35E-15 T 21-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 Pfam PF00698 Acyl transferase domain 7 287 1.4E-35 T 21-04-2016 IPR014043 Acyl transferase APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 PANTHER PTHR10982 1 310 2.6E-155 T 21-04-2016 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 Gene3D G3DSA:3.40.366.10 3 123 1.0E-74 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 Gene3D G3DSA:3.40.366.10 200 305 1.0E-74 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 SUPERFAMILY SSF52151 193 309 2.3E-82 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 SUPERFAMILY SSF52151 4 123 2.3E-82 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 PIRSF PIRSF000446 1 311 6.5E-136 T 21-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APL_RS10565 a7d8f36c54a0e70f01053c3b6d73da7e 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 294 2.0E-126 T 21-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:3.30.420.10 335 571 1.0E-80 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SMART SM00475 7 268 5.4E-133 T 21-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SUPERFAMILY SSF88723 7 170 9.25E-56 T 21-04-2016 IPR029060 PIN domain-like APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SMART SM00482 716 921 5.7E-117 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 ProSitePatterns PS00447 DNA polymerase family A signature. 784 803 - T 21-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:1.10.150.20 742 848 5.8E-37 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:3.30.70.370 849 957 3.7E-67 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:3.30.70.370 694 741 3.7E-67 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:1.10.150.20 187 253 4.8E-24 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Pfam PF01612 3'-5' exonuclease 336 546 4.5E-39 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 TIGRFAM TIGR00593 pola: DNA polymerase I 9 957 3.0E-291 T 21-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Pfam PF00476 DNA polymerase family A 580 955 4.5E-157 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SUPERFAMILY SSF53098 339 393 4.15E-52 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SUPERFAMILY SSF53098 429 547 4.15E-52 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SMART SM00474 336 546 8.8E-37 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PANTHER PTHR10133:SF27 1 288 0.0 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PANTHER PTHR10133:SF27 322 956 0.0 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SUPERFAMILY SSF47807 171 290 8.52E-30 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SUPERFAMILY SSF56672 551 957 3.34E-158 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PANTHER PTHR10133 1 288 0.0 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PANTHER PTHR10133 322 956 0.0 T 21-04-2016 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.2E-28 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 SMART SM00279 173 208 4.6E-13 T 21-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 685 707 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 708 723 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 809 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 904 917 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 821 832 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 843 854 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 753 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 891 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 773 3.9E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.1E-55 T 21-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:3.40.50.1010 8 186 1.2E-70 T 21-04-2016 IPR029060 PIN domain-like APL_RS02430 caf410e84cb7e698b5d118bb8db34999 957 Gene3D G3DSA:1.20.1060.10 572 693 2.4E-35 T 21-04-2016 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 SUPERFAMILY SSF52402 6 212 3.97E-59 T 21-04-2016 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 PIRSF PIRSF006293 3 221 6.1E-73 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 204 4.3E-77 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 PANTHER PTHR11587:SF3 6 211 1.1E-84 T 21-04-2016 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 216 46.908 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 PANTHER PTHR11587 6 211 1.1E-84 T 21-04-2016 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 Pfam PF06508 Queuosine biosynthesis protein QueC 6 211 6.1E-74 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05720 21961e37c2e5a61bd8f62a79755e76bb 222 Gene3D G3DSA:3.40.50.620 5 211 6.7E-72 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS09125 bb56143256bef339923dec87ff376bc4 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 25.553 T 21-04-2016 IPR022973 Ribosomal protein L10 APL_RS09125 bb56143256bef339923dec87ff376bc4 163 SUPERFAMILY SSF160369 4 158 1.23E-47 T 21-04-2016 APL_RS09125 bb56143256bef339923dec87ff376bc4 163 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 21-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09125 bb56143256bef339923dec87ff376bc4 163 Pfam PF00466 Ribosomal protein L10 5 101 1.1E-27 T 21-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APL_RS09125 bb56143256bef339923dec87ff376bc4 163 PANTHER PTHR11560 1 159 2.0E-58 T 21-04-2016 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PANTHER PTHR11405 1 276 1.5E-199 T 21-04-2016 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PANTHER PTHR11405 298 334 1.5E-199 T 21-04-2016 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 Gene3D G3DSA:3.40.50.1370 145 320 5.3E-70 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.4E-46 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PANTHER PTHR11405:SF44 1 276 1.5E-199 T 21-04-2016 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PANTHER PTHR11405:SF44 298 334 1.5E-199 T 21-04-2016 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 SUPERFAMILY SSF53671 4 333 2.36E-99 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 80.938 T 21-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.1E-30 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-30 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-30 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.1E-30 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-30 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 331 2.3E-53 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 2.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 Gene3D G3DSA:3.40.50.1370 3 144 1.9E-55 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 1.4E-136 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APL_RS06910 ad5d744a65273db88e44cf42553fd663 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PANTHER PTHR11963 37 427 9.1E-222 T 21-04-2016 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 Gene3D G3DSA:3.40.630.10 101 426 7.5E-110 T 21-04-2016 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 Pfam PF12404 Peptidase 1 74 1.1E-32 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 103 420 4.4E-97 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 274 281 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PRINTS PR00481 Cytosol aminopeptidase signature 189 206 2.1E-41 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PRINTS PR00481 Cytosol aminopeptidase signature 298 313 2.1E-41 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PRINTS PR00481 Cytosol aminopeptidase signature 211 232 2.1E-41 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PRINTS PR00481 Cytosol aminopeptidase signature 248 269 2.1E-41 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PRINTS PR00481 Cytosol aminopeptidase signature 270 290 2.1E-41 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PANTHER PTHR11963:SF20 37 427 9.1E-222 T 21-04-2016 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 PIRSF PIRSF036388 1 427 6.0E-221 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APL_RS01995 1e0441b268e5e8d76384006db6bfe6dc 427 SUPERFAMILY SSF53187 99 426 2.01E-97 T 21-04-2016 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 SUPERFAMILY SSF143437 1 173 2.96E-46 T 21-04-2016 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 Gene3D G3DSA:3.40.250.10 396 478 2.3E-10 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 PANTHER PTHR14911:SF15 3 417 1.3E-243 T 21-04-2016 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 SMART SM00981 75 165 4.4E-23 T 21-04-2016 IPR004114 THUMP domain GO:0003723 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 217.205 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 Gene3D G3DSA:3.40.50.620 173 333 1.7E-36 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 Pfam PF02926 THUMP domain 29 162 1.3E-24 T 21-04-2016 IPR004114 THUMP domain GO:0003723 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 SUPERFAMILY SSF52821 394 480 3.54E-10 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 SUPERFAMILY SSF52402 174 372 9.04E-41 T 21-04-2016 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.0E-74 T 21-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 370 4.7E-120 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 PANTHER PTHR14911 3 417 1.3E-243 T 21-04-2016 APL_RS05605 bf0f75f3b2a2b532a71a0a70514b7f97 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 481 1.4E-40 T 21-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 Pfam PF00005 ABC transporter 23 183 5.5E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 1.3E-16 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 SMART SM00382 32 242 1.3E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 PANTHER PTHR24220:SF514 5 326 2.4E-176 T 21-04-2016 APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 4.5E-22 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 Gene3D G3DSA:3.40.50.300 2 257 2.1E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 SUPERFAMILY SSF52540 3 256 8.87E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04155 c9ae0c16b4b367e4e0a1fdd1c81899b7 345 PANTHER PTHR24220 5 326 2.4E-176 T 21-04-2016 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 Pfam PF03610 PTS system fructose IIA component 5 118 2.1E-33 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 SUPERFAMILY SSF53062 2 132 1.7E-33 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 Gene3D G3DSA:3.40.50.510 3 135 3.2E-44 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 PANTHER PTHR33799 3 323 2.6E-165 T 21-04-2016 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 SUPERFAMILY SSF52728 162 320 5.36E-53 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 PANTHER PTHR33799:SF3 3 323 2.6E-165 T 21-04-2016 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 Pfam PF03830 PTS system sorbose subfamily IIB component 163 309 8.7E-53 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 163 310 1.5E-53 T 21-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 117 3.2E-39 T 21-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS07360 4fe57670232dbce3d3d84c316214eaa0 323 Gene3D G3DSA:3.40.35.10 162 320 2.6E-64 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:3.40.50.740 94 176 2.6E-74 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:3.40.50.740 398 574 2.6E-74 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:3.40.50.740 620 667 2.6E-74 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 24 1.2E-5 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:2.40.40.20 703 827 4.5E-44 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 SUPERFAMILY SSF53706 36 641 8.11E-200 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 38 90 8.2E-17 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Pfam PF00384 Molybdopterin oxidoreductase 94 566 4.1E-87 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 1.7E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 SMART SM00926 37 91 7.6E-14 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Pfam PF01568 Molydopterin dinucleotide binding domain 713 821 4.9E-25 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615 642 827 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615 344 595 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615 1 284 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:3.40.228.10 324 397 2.4E-58 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:3.40.228.10 177 289 2.4E-58 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 SUPERFAMILY SSF50692 686 827 2.49E-40 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 827 0.0 T 21-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Gene3D G3DSA:2.20.25.90 36 92 2.6E-19 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 42 59 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615:SF123 642 827 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615:SF123 344 595 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 PANTHER PTHR11615:SF123 1 284 0.0 T 21-04-2016 APL_RS07550 5b76ac42ae01172e71991354953e7d04 827 Hamap MF_01630 Nitrate reductase [napA]. 1 827 28.143 T 21-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 Pfam PF00699 Urease beta subunit 3 99 4.1E-45 T 21-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 2.5E-52 T 21-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 Gene3D G3DSA:2.10.150.10 1 101 1.3E-49 T 21-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 SUPERFAMILY SSF51278 1 101 2.35E-48 T 21-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.934 T 21-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 PANTHER PTHR33569 1 101 1.6E-66 T 21-04-2016 APL_RS08580 e4353550e441d8d39d44b2cf381f64b8 101 PANTHER PTHR33569:SF1 1 101 1.6E-66 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 SUPERFAMILY SSF55021 427 508 7.2E-23 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 PANTHER PTHR10314 5 364 2.3E-198 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 SUPERFAMILY SSF53686 12 361 1.06E-105 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS07680 3042a27864109d57e0438f1be215a478 508 Gene3D G3DSA:3.40.1020.10 335 507 2.2E-50 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 Gene3D G3DSA:3.40.50.1100 77 329 2.2E-80 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 PANTHER PTHR10314:SF30 5 364 2.3E-198 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 325 414 2.7E-29 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APL_RS07680 3042a27864109d57e0438f1be215a478 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 507 4.3E-22 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APL_RS07680 3042a27864109d57e0438f1be215a478 508 SUPERFAMILY SSF55021 332 418 4.12E-27 T 21-04-2016 APL_RS07680 3042a27864109d57e0438f1be215a478 508 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 8.3E-81 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS07680 3042a27864109d57e0438f1be215a478 508 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APL_RS07680 3042a27864109d57e0438f1be215a478 508 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 11 507 7.3E-252 T 21-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 SUPERFAMILY SSF55811 51 246 5.11E-37 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 Pfam PF00293 NUDIX domain 136 236 2.0E-16 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 98 129 1.4E-12 T 21-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 PANTHER PTHR22769 90 235 2.9E-53 T 21-04-2016 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 261 38.883 T 21-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 PANTHER PTHR22769:SF7 90 235 2.9E-53 T 21-04-2016 APL_RS00460 bfdf27a56140a46b3d17827bedd27418 262 Gene3D G3DSA:3.90.79.10 97 254 1.7E-39 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 PANTHER PTHR15184:SF3 1 496 2.2E-292 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.673 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.9E-73 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 511 2.8E-259 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.3E-46 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Gene3D G3DSA:2.40.30.20 1 93 1.1E-30 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Gene3D G3DSA:3.40.50.300 94 382 7.6E-113 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Gene3D G3DSA:1.20.150.20 383 510 3.0E-49 T 21-04-2016 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 SUPERFAMILY SSF52540 96 381 7.44E-94 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 PIRSF PIRSF039088 1 513 1.9E-232 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 PANTHER PTHR15184 1 496 2.2E-292 T 21-04-2016 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 SUPERFAMILY SSF47917 383 510 1.36E-46 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08760 fd4a954da12f07b709a10ace0723882d 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 3.4E-14 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 Pfam PF00297 Ribosomal protein L3 65 181 8.7E-13 T 21-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 206 40.407 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 203 4.2E-91 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 21-04-2016 IPR019926 Ribosomal protein L3, conserved site APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 Gene3D G3DSA:2.40.30.10 3 32 4.8E-8 T 21-04-2016 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 Gene3D G3DSA:2.40.30.10 157 206 4.8E-8 T 21-04-2016 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 Gene3D G3DSA:4.10.960.10 77 156 3.4E-33 T 21-04-2016 APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 SUPERFAMILY SSF50447 1 207 5.56E-80 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS09360 8186d619dabd0d2e3d61450c207aa353 208 PANTHER PTHR11229 1 207 4.5E-121 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 PANTHER PTHR11228 11 129 1.6E-33 T 21-04-2016 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 Pfam PF04055 Radical SAM superfamily 36 118 1.3E-13 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 11 210 34.694 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 PIRSF PIRSF000370 9 210 1.4E-42 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 PANTHER PTHR11228:SF6 11 129 1.6E-33 T 21-04-2016 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 Gene3D G3DSA:3.20.20.70 36 118 1.8E-15 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 SUPERFAMILY SSF102114 34 117 5.36E-15 T 21-04-2016 APL_RS05730 eec7cb701c543c26881b3e2ee2da8bbb 210 Pfam PF13394 4Fe-4S single cluster domain 32 106 2.2E-11 T 21-04-2016 APL_RS06470 a21501e266f2625543048818d16a95e6 296 SUPERFAMILY SSF161098 10 296 1.87E-67 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06470 a21501e266f2625543048818d16a95e6 296 Gene3D G3DSA:1.10.3720.10 8 283 6.6E-63 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06470 a21501e266f2625543048818d16a95e6 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 9.9E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 PIRSF PIRSF005963 1 330 1.6E-132 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 Hamap MF_00206 Lipoyl synthase [lipA]. 46 330 150.642 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 SUPERFAMILY SSF102114 62 328 1.31E-69 T 21-04-2016 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 PANTHER PTHR10949 15 330 2.0E-177 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 Pfam PF04055 Radical SAM superfamily 99 260 2.6E-16 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 Gene3D G3DSA:3.20.20.70 62 321 3.5E-73 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 SMART SM00729 93 298 1.1E-18 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS08460 fbaba0e7e7fc21a0d9a0aecd05ffe8e8 330 TIGRFAM TIGR00510 lipA: lipoyl synthase 32 330 2.7E-151 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS05360 70fb6c18bcd2636ff9b868ff0bb71d2a 266 Pfam PF00535 Glycosyl transferase family 2 4 140 3.8E-26 T 21-04-2016 IPR001173 Glycosyltransferase 2-like APL_RS05360 70fb6c18bcd2636ff9b868ff0bb71d2a 266 PANTHER PTHR22916 1 229 4.1E-108 T 21-04-2016 APL_RS05360 70fb6c18bcd2636ff9b868ff0bb71d2a 266 SUPERFAMILY SSF53448 2 229 1.44E-40 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS05360 70fb6c18bcd2636ff9b868ff0bb71d2a 266 Gene3D G3DSA:3.90.550.10 1 228 1.2E-42 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS05360 70fb6c18bcd2636ff9b868ff0bb71d2a 266 PANTHER PTHR22916:SF27 1 229 4.1E-108 T 21-04-2016 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 7 253 35.21 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 PIRSF PIRSF009437 1 255 1.4E-100 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 PANTHER PTHR37838:SF1 1 257 1.4E-95 T 21-04-2016 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 SMART SM00900 144 241 1.8E-27 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 PANTHER PTHR37838 1 257 1.4E-95 T 21-04-2016 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 249 7.0E-93 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APL_RS00785 6ec7a598ff7a7d1e70d1724b6a48b77e 257 Pfam PF04205 FMN-binding domain 144 235 1.2E-12 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Pfam PF00226 DnaJ domain 5 67 1.3E-27 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Gene3D G3DSA:2.60.260.20 213 256 2.6E-19 T 21-04-2016 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Gene3D G3DSA:2.60.260.20 108 142 2.6E-19 T 21-04-2016 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SMART SM00271 4 62 3.7E-31 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Pfam PF00684 DnaJ central domain 149 209 8.6E-14 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Pfam PF01556 DnaJ C terminal domain 123 335 2.7E-44 T 21-04-2016 IPR002939 Chaperone DnaJ, C-terminal APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.914 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PANTHER PTHR24078 1 376 3.3E-158 T 21-04-2016 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SUPERFAMILY SSF49493 117 140 4.84E-21 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SUPERFAMILY SSF49493 215 269 4.84E-21 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SUPERFAMILY SSF49493 261 346 7.06E-24 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PRINTS PR00625 DnaJ domain signature 62 81 2.3E-32 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PRINTS PR00625 DnaJ domain signature 25 40 2.3E-32 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PRINTS PR00625 DnaJ domain signature 42 62 2.3E-32 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PRINTS PR00625 DnaJ domain signature 7 25 2.3E-32 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Gene3D G3DSA:2.60.260.20 258 335 2.5E-24 T 21-04-2016 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 8.9E-140 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SUPERFAMILY SSF46565 1 111 1.57E-36 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 SUPERFAMILY SSF57938 136 213 1.83E-21 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Gene3D G3DSA:1.10.287.110 1 107 1.4E-38 T 21-04-2016 IPR001623 DnaJ domain APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 Gene3D G3DSA:2.10.230.10 143 212 8.3E-23 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 PANTHER PTHR24078:SF231 1 376 3.3E-158 T 21-04-2016 APL_RS10120 14ac42626464ae9d8efd087c90fb2226 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 21-04-2016 IPR018253 DnaJ domain, conserved site APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Gene3D G3DSA:3.30.9.10 226 326 7.3E-9 T 21-04-2016 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PANTHER PTHR11985 1 557 0.0 T 21-04-2016 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 24 41 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Pfam PF04324 BFD-like [2Fe-2S] binding domain 443 492 3.9E-9 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 SUPERFAMILY SSF51905 340 387 3.64E-39 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 SUPERFAMILY SSF51905 19 236 3.64E-39 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 7.4E-22 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 7.4E-22 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 42 7.4E-22 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 7.4E-22 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 7.4E-22 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 PANTHER PTHR11985:SF14 1 557 0.0 T 21-04-2016 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 SUPERFAMILY SSF54373 236 327 8.89E-13 T 21-04-2016 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Pfam PF01266 FAD dependent oxidoreductase 20 368 9.9E-50 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Gene3D G3DSA:3.50.50.60 16 110 3.4E-37 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Gene3D G3DSA:3.50.50.60 149 225 3.4E-37 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Gene3D G3DSA:3.50.50.60 340 376 3.4E-37 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 494 3.0E-7 T 21-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APL_RS01950 3518fc09e92ccfcd4ef294988e48e3e5 561 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 20 549 5.9E-258 T 21-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 3 138 3.1E-8 T 21-04-2016 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 PANTHER PTHR11241:SF1 77 192 4.2E-63 T 21-04-2016 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 PANTHER PTHR11241:SF1 1 58 4.2E-63 T 21-04-2016 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 SUPERFAMILY SSF51283 1 193 1.44E-55 T 21-04-2016 IPR029054 dUTPase-like APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 PANTHER PTHR11241 77 192 4.2E-63 T 21-04-2016 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 PANTHER PTHR11241 1 58 4.2E-63 T 21-04-2016 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 Gene3D G3DSA:2.70.40.10 1 192 1.3E-57 T 21-04-2016 IPR029054 dUTPase-like APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 2.8E-66 T 21-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APL_RS04375 d462ccdc33d2135eb4e81d86d24cce3c 194 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 32.622 T 21-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 PANTHER PTHR20941 1 116 2.2E-29 T 21-04-2016 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 115 1.8E-34 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 115 2.1E-32 T 21-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 SUPERFAMILY SSF55620 1 115 8.34E-36 T 21-04-2016 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 Gene3D G3DSA:3.30.1130.10 1 115 2.9E-39 T 21-04-2016 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 Pfam PF02152 Dihydroneopterin aldolase 5 113 4.1E-31 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS07065 a5ac59357d0a7d7731b9e68f506b2ba6 117 SMART SM00905 5 115 2.4E-43 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 SUPERFAMILY SSF55347 179 486 1.37E-113 T 21-04-2016 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 485 1.6E-116 T 21-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 Gene3D G3DSA:3.40.50.720 4 188 4.5E-68 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 486 89.644 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PIRSF PIRSF000110 1 488 1.9E-180 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 2.1E-49 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 2.1E-49 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 2.1E-49 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 2.1E-49 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 2.1E-49 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 SUPERFAMILY SSF51735 3 192 2.85E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 189 1.5E-59 T 21-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PANTHER PTHR23429:SF0 8 494 5.8E-241 T 21-04-2016 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 Gene3D G3DSA:3.30.360.10 189 485 2.1E-122 T 21-04-2016 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 486 1.3E-206 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 21-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS06875 12f30e72f3f6b40075753b239ff45671 495 PANTHER PTHR23429 8 494 5.8E-241 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 Gene3D G3DSA:3.40.50.720 140 263 8.5E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 8.2E-71 T 21-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.7E-42 T 21-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 SUPERFAMILY SSF51735 123 281 1.29E-55 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PANTHER PTHR10025 1 279 2.7E-170 T 21-04-2016 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 5.9E-86 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.04 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 SUPERFAMILY SSF53223 1 122 1.82E-40 T 21-04-2016 APL_RS04690 8f081a61dc95ca2ec2094d558e514882 285 Gene3D G3DSA:3.40.192.10 7 139 3.8E-52 T 21-04-2016 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 TIGRFAM TIGR00498 lexA: repressor LexA 4 207 5.9E-78 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 130 141 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 129 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 158 170 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 Gene3D G3DSA:2.10.109.10 84 206 1.4E-42 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 PANTHER PTHR33516 2 210 4.9E-99 T 21-04-2016 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 PANTHER PTHR33516:SF2 2 210 4.9E-99 T 21-04-2016 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 Hamap MF_00015 LexA repressor [lexA]. 5 207 32.803 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 Pfam PF00717 Peptidase S24-like 122 187 4.2E-15 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 SUPERFAMILY SSF51306 84 206 2.09E-37 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 Pfam PF01726 LexA DNA binding domain 4 67 5.1E-29 T 21-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 SUPERFAMILY SSF46785 5 71 7.27E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05780 9642d8adf32ed97f2cfe05f9cb62f716 210 Gene3D G3DSA:1.10.10.10 4 71 3.0E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 SUPERFAMILY SSF46785 1 111 2.0E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 PANTHER PTHR30126:SF14 1 294 4.3E-150 T 21-04-2016 APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 Pfam PF03466 LysR substrate binding domain 87 291 8.1E-38 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 Gene3D G3DSA:1.10.10.10 1 80 5.7E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 Gene3D G3DSA:3.40.190.10 81 198 1.0E-21 T 21-04-2016 APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 PANTHER PTHR30126 1 294 4.3E-150 T 21-04-2016 APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 SUPERFAMILY SSF53850 88 293 2.29E-32 T 21-04-2016 APL_RS05125 5e2595bf7f2a625c150be3c7e8e1c827 294 Gene3D G3DSA:3.40.190.10 199 264 5.7E-12 T 21-04-2016 APL_RS10415 f7ca5b95b240f2a4561d7af45aca0497 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 4.0E-20 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 APL_RS10415 f7ca5b95b240f2a4561d7af45aca0497 72 PIRSF PIRSF006169 1 72 9.1E-35 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 APL_RS10415 f7ca5b95b240f2a4561d7af45aca0497 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 9.9E-31 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 APL_RS10415 f7ca5b95b240f2a4561d7af45aca0497 72 SUPERFAMILY SSF118001 1 70 1.96E-26 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 APL_RS10415 f7ca5b95b240f2a4561d7af45aca0497 72 Gene3D G3DSA:1.10.10.610 1 70 9.1E-32 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 2.3E-11 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 PANTHER PTHR11953:SF0 1 236 2.6E-87 T 21-04-2016 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.5E-23 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 SUPERFAMILY SSF54211 1 181 5.57E-46 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 SUPERFAMILY SSF55666 153 236 3.93E-26 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.2E-115 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 21-04-2016 IPR018336 Ribonuclease PH, conserved site APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 Gene3D G3DSA:3.30.230.70 9 236 2.0E-36 T 21-04-2016 IPR027408 PNPase/RNase PH domain APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 PANTHER PTHR11953 1 236 2.6E-87 T 21-04-2016 APL_RS00275 fa0508d4ed7c92616405b018da525f7e 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.929 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 89 3.9E-37 T 21-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Gene3D G3DSA:1.20.59.10 2 104 1.1E-39 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 21-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Pfam PF01817 Chorismate mutase type II 9 89 2.4E-15 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 SUPERFAMILY SSF48600 4 93 3.85E-20 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Gene3D G3DSA:3.40.190.10 105 193 7.3E-30 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 SUPERFAMILY SSF55021 280 378 6.11E-25 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Gene3D G3DSA:3.40.190.10 194 273 2.4E-22 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Pfam PF00800 Prephenate dehydratase 106 286 2.2E-53 T 21-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 SMART SM00830 9 91 6.2E-24 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 PANTHER PTHR21022 5 381 1.1E-141 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 21-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 SUPERFAMILY SSF53850 105 291 2.93E-50 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 PANTHER PTHR21022:SF0 5 381 1.1E-141 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 Gene3D G3DSA:3.30.70.260 294 377 4.0E-28 T 21-04-2016 APL_RS05400 2f4a96b54fb9f855eba29e53bc9eb0f4 385 PIRSF PIRSF001500 1 380 1.9E-137 T 21-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 TIGRFAM TIGR01932 hflC: HflC protein 158 291 4.3E-52 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 TIGRFAM TIGR01932 hflC: HflC protein 1 156 1.4E-52 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 Pfam PF01145 SPFH domain / Band 7 family 22 207 1.8E-31 T 21-04-2016 IPR001107 Band 7 domain APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 SUPERFAMILY SSF117892 57 195 1.44E-26 T 21-04-2016 IPR001107 Band 7 domain APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 PANTHER PTHR10264 1 295 9.7E-101 T 21-04-2016 IPR001972 Stomatin family GO:0016020 APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 SMART SM00244 18 190 5.7E-43 T 21-04-2016 IPR001107 Band 7 domain APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 PANTHER PTHR10264:SF80 1 295 9.7E-101 T 21-04-2016 APL_RS05615 dad49c8ff5a4080b4efdf179f47bd027 295 PIRSF PIRSF005651 1 295 1.8E-96 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APL_RS03770 d8c27b2a81b0e4c42a5a3901a0b4160b 190 Pfam PF07273 Protein of unknown function (DUF1439) 27 181 3.2E-47 T 21-04-2016 IPR010835 Protein of unknown function DUF1439 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 SUPERFAMILY SSF55957 371 452 6.1E-18 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Gene3D G3DSA:3.30.310.50 375 452 1.0E-19 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 SUPERFAMILY SSF53738 3 174 6.67E-40 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 SUPERFAMILY SSF53738 261 365 4.71E-31 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Gene3D G3DSA:3.40.120.10 170 252 2.3E-26 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 2.1E-23 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 6.6E-29 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 6.6E-29 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 6.6E-29 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 6.6E-29 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PANTHER PTHR22573:SF18 7 452 6.1E-173 T 21-04-2016 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 450 1.0E-11 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 133 4.8E-34 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 PANTHER PTHR22573 7 452 6.1E-173 T 21-04-2016 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 368 6.3E-23 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Gene3D G3DSA:3.40.120.10 253 365 1.1E-38 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 Gene3D G3DSA:3.40.120.10 5 138 2.7E-37 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 SUPERFAMILY SSF53738 151 259 6.67E-27 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03410 80eeae15b6b59c17e2c74f57168494fc 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.3E-69 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 Pfam PF02542 YgbB family 2 155 2.1E-66 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.053 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 PANTHER PTHR32125 1 157 2.4E-58 T 21-04-2016 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 21-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 SUPERFAMILY SSF69765 1 157 1.83E-66 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04205 42b1da9549fbb62750bb6461b72f4d5c 158 Gene3D G3DSA:3.30.1330.50 1 157 4.7E-73 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS00135 a0ba648574a897c997f124b07cabfe0a 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 256 5.6E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00135 a0ba648574a897c997f124b07cabfe0a 261 PANTHER PTHR30465 10 256 7.1E-49 T 21-04-2016 APL_RS00135 a0ba648574a897c997f124b07cabfe0a 261 SUPERFAMILY SSF161098 64 252 7.85E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00135 a0ba648574a897c997f124b07cabfe0a 261 PANTHER PTHR30465:SF2 10 256 7.1E-49 T 21-04-2016 APL_RS00135 a0ba648574a897c997f124b07cabfe0a 261 Gene3D G3DSA:1.10.3720.10 59 260 2.3E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS05390 80546d7886db79b5f1e66a69b8ce2374 246 Gene3D G3DSA:3.40.50.620 71 206 4.4E-37 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS05390 80546d7886db79b5f1e66a69b8ce2374 246 PANTHER PTHR30336:SF1 1 243 1.9E-42 T 21-04-2016 APL_RS05390 80546d7886db79b5f1e66a69b8ce2374 246 PANTHER PTHR30336 1 243 1.9E-42 T 21-04-2016 APL_RS05390 80546d7886db79b5f1e66a69b8ce2374 246 Pfam PF02698 DUF218 domain 79 241 2.1E-26 T 21-04-2016 IPR003848 Domain of unknown function DUF218 APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Gene3D G3DSA:1.10.10.200 1 79 6.3E-35 T 21-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 35.635 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 PANTHER PTHR12532 1 240 1.3E-118 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 8.4E-106 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Pfam PF01709 Transcriptional regulator 5 235 3.0E-90 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Gene3D G3DSA:3.30.70.980 135 204 8.5E-28 T 21-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Gene3D G3DSA:3.30.1270.10 211 244 2.6E-37 T 21-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 Gene3D G3DSA:3.30.1270.10 83 134 2.6E-37 T 21-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APL_RS06025 9f73060f1107f0b3e9944618847f3572 246 SUPERFAMILY SSF75625 3 243 1.96E-94 T 21-04-2016 IPR029072 YebC-like APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 SUPERFAMILY SSF53067 2 242 2.68E-73 T 21-04-2016 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 2.1E-78 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 PANTHER PTHR10196 1 481 4.5E-276 T 21-04-2016 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 SUPERFAMILY SSF53067 242 480 1.4E-57 T 21-04-2016 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 TIGRFAM TIGR01312 XylB: xylulokinase 3 476 7.1E-178 T 21-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 PANTHER PTHR10196:SF72 1 481 4.5E-276 T 21-04-2016 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 434 3.8E-29 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 PIRSF PIRSF000538 1 481 5.1E-131 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 Gene3D G3DSA:3.30.420.40 1 240 1.1E-66 T 21-04-2016 APL_RS10130 fb852e2251f6e8164e7db15572d6079c 481 Gene3D G3DSA:3.30.420.40 244 480 1.6E-52 T 21-04-2016 APL_RS06165 9fe0625f858e38b6ba2dc70a77020c62 518 PANTHER PTHR11814 9 502 4.5E-153 T 21-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APL_RS06165 9fe0625f858e38b6ba2dc70a77020c62 518 PANTHER PTHR11814:SF123 9 502 4.5E-153 T 21-04-2016 APL_RS06165 9fe0625f858e38b6ba2dc70a77020c62 518 Pfam PF00916 Sulfate permease family 11 381 1.4E-57 T 21-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SMART SM00436 141 229 1.5E-47 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 1.9E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.9E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 1.9E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 1.9E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.9E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SUPERFAMILY SSF57783 748 811 3.74E-19 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SMART SM00437 279 534 2.1E-125 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:3.30.65.10 714 747 3.4E-8 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:3.30.65.10 597 635 3.2E-9 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:3.30.65.10 748 810 1.2E-24 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SUPERFAMILY SSF56712 3 616 1.18E-201 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 867 9.1E-19 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 6.4E-12 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SMART SM00493 3 140 4.9E-35 T 21-04-2016 IPR006171 Toprim domain APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:2.20.25.10 812 869 4.2E-30 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 604 629 2.6E-5 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 749 6.2E-10 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:2.70.20.10 221 341 1.4E-26 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:2.70.20.10 345 480 9.5E-34 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:1.10.460.10 481 585 3.1E-58 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:1.10.460.10 666 672 3.1E-58 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:1.10.460.10 172 219 3.1E-58 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PANTHER PTHR11390:SF27 75 780 0.0 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PANTHER PTHR11390:SF27 1 37 0.0 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 2.7E-248 T 21-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 729 55.883 T 21-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SUPERFAMILY SSF57783 707 745 8.67E-6 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF01131 DNA topoisomerase 166 571 6.4E-128 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Gene3D G3DSA:3.40.50.140 1 171 5.1E-56 T 21-04-2016 IPR006171 Toprim domain APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 SUPERFAMILY SSF57783 813 868 3.74E-22 T 21-04-2016 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PANTHER PTHR11390 75 780 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 PANTHER PTHR11390 1 37 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03630 ba03d7f32a848afddfaaf92028c088f7 869 Pfam PF01751 Toprim domain 5 150 1.8E-34 T 21-04-2016 IPR006171 Toprim domain APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 PANTHER PTHR10060 1 263 1.5E-66 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 SUPERFAMILY SSF51556 1 261 4.54E-65 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 Pfam PF01026 TatD related DNase 4 261 7.5E-59 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 Gene3D G3DSA:3.20.20.140 1 261 8.8E-66 T 21-04-2016 APL_RS06485 3377ee6bdfe4b41673ce6fa3f96ad8af 264 PIRSF PIRSF005902 1 264 1.7E-62 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS02170 825cd3ed1a7249e9ed2c815ae59a5ac4 153 Gene3D G3DSA:3.30.420.10 4 146 7.4E-60 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS02170 825cd3ed1a7249e9ed2c815ae59a5ac4 153 PANTHER PTHR10642 4 152 2.9E-62 T 21-04-2016 APL_RS02170 825cd3ed1a7249e9ed2c815ae59a5ac4 153 Pfam PF00075 RNase H 4 140 1.0E-50 T 21-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APL_RS02170 825cd3ed1a7249e9ed2c815ae59a5ac4 153 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 32.993 T 21-04-2016 IPR022892 Ribonuclease H GO:0004523 APL_RS02170 825cd3ed1a7249e9ed2c815ae59a5ac4 153 SUPERFAMILY SSF53098 1 142 2.53E-57 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS09120 3affb29453d92315a767cf53d445457e 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.3E-105 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APL_RS09120 3affb29453d92315a767cf53d445457e 229 PIRSF PIRSF002155 1 227 1.5E-78 T 21-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APL_RS09120 3affb29453d92315a767cf53d445457e 229 Gene3D G3DSA:3.40.50.790 69 159 1.5E-41 T 21-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APL_RS09120 3affb29453d92315a767cf53d445457e 229 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.1E-52 T 21-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APL_RS09120 3affb29453d92315a767cf53d445457e 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 21-04-2016 IPR023673 Ribosomal protein L1, conserved site APL_RS09120 3affb29453d92315a767cf53d445457e 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.929 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APL_RS09120 3affb29453d92315a767cf53d445457e 229 PANTHER PTHR23105 21 229 1.2E-83 T 21-04-2016 APL_RS09120 3affb29453d92315a767cf53d445457e 229 PANTHER PTHR23105:SF5 21 229 1.2E-83 T 21-04-2016 APL_RS09120 3affb29453d92315a767cf53d445457e 229 Gene3D G3DSA:3.30.190.20 161 225 6.9E-47 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APL_RS09120 3affb29453d92315a767cf53d445457e 229 Gene3D G3DSA:3.30.190.20 17 68 6.9E-47 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APL_RS09120 3affb29453d92315a767cf53d445457e 229 SUPERFAMILY SSF56808 6 225 1.7E-82 T 21-04-2016 IPR023674 Ribosomal protein L1-like APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 PANTHER PTHR30163 42 356 4.1E-83 T 21-04-2016 IPR011757 Lytic transglycosylase MltB APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 PANTHER PTHR30163:SF2 42 356 4.1E-83 T 21-04-2016 APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 Gene3D G3DSA:1.10.530.10 103 155 7.4E-43 T 21-04-2016 APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 Gene3D G3DSA:1.10.530.10 236 357 7.4E-43 T 21-04-2016 APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 SUPERFAMILY SSF53955 41 356 1.69E-79 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 43 356 2.7E-99 T 21-04-2016 IPR011970 Lytic murein transglycosylase APL_RS03360 17fd701a3bceb37639c60d069a2ba574 362 Pfam PF13406 Transglycosylase SLT domain 44 354 1.5E-84 T 21-04-2016 IPR031304 Transglycosylase SLT domain 2 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 489 825 3.3E-96 T 21-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 SUPERFAMILY SSF82689 999 1096 2.22E-26 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 Pfam PF00924 Mechanosensitive ion channel 886 1085 1.5E-56 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 Gene3D G3DSA:3.30.70.100 1000 1083 7.2E-23 T 21-04-2016 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 PANTHER PTHR30347 1 1101 0.0 T 21-04-2016 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 958 992 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 Pfam PF12795 Mechanosensitive ion channel porin domain 36 267 3.7E-42 T 21-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 Gene3D G3DSA:2.30.30.60 944 993 1.0E-16 T 21-04-2016 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 PANTHER PTHR30347:SF2 1 1101 0.0 T 21-04-2016 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 SUPERFAMILY SSF82861 842 927 1.07E-6 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APL_RS03900 f516829ed728ba2ecd588822a18316fd 1114 SUPERFAMILY SSF50182 929 993 4.9E-16 T 21-04-2016 IPR010920 LSM domain APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PIRSF PIRSF000398 1 277 8.8E-65 T 21-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 259 2.4E-68 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PANTHER PTHR30481 5 275 4.3E-111 T 21-04-2016 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 Gene3D G3DSA:1.10.1020.10 64 161 3.4E-32 T 21-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 SUPERFAMILY SSF53335 5 275 7.56E-74 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 274 5.4E-91 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 Gene3D G3DSA:3.40.50.150 3 63 2.4E-51 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 Gene3D G3DSA:3.40.50.150 165 274 2.4E-51 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 4.01E-18 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 54 67 4.01E-18 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.01E-18 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 183 195 4.01E-18 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS00985 1f45aa0d8bc05aa0fff1447ba546c174 277 PANTHER PTHR30481:SF3 5 275 4.3E-111 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 SUPERFAMILY SSF111369 162 264 4.97E-7 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 Pfam PF13437 HlyD family secretion protein 211 303 1.6E-10 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 338 2.94E-5 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 55 75 2.94E-5 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 SUPERFAMILY SSF111369 42 133 1.1E-7 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 PANTHER PTHR30438 4 351 1.5E-57 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 Gene3D G3DSA:2.40.50.100 208 241 1.7E-10 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 Gene3D G3DSA:2.40.50.100 45 77 1.7E-10 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 PANTHER PTHR30438:SF1 4 351 1.5E-57 T 21-04-2016 APL_RS04385 6bb3f09cccbaaac6c067a783252755f3 353 Pfam PF13533 Biotin-lipoyl like 45 92 1.1E-8 T 21-04-2016 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 PANTHER PTHR30466:SF2 15 166 4.1E-55 T 21-04-2016 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 Gene3D G3DSA:2.30.110.10 13 166 1.0E-48 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 PANTHER PTHR30466 15 166 4.1E-55 T 21-04-2016 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 17 168 4.3E-77 T 21-04-2016 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 UniPathway: UPA00208 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 SMART SM00903 21 167 2.5E-49 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 SUPERFAMILY SSF50475 16 166 9.08E-44 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS07100 4d8d5bfce3074ac7c91935e507897fd5 170 Pfam PF01613 Flavin reductase like domain 21 168 1.9E-32 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Gene3D G3DSA:1.10.287.80 19 60 2.1E-39 T 21-04-2016 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Gene3D G3DSA:1.10.287.80 203 236 2.1E-39 T 21-04-2016 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 7.5E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 7.5E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 7.5E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 7.5E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Pfam PF00231 ATP synthase 5 287 8.3E-93 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 21-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Gene3D G3DSA:3.40.1380.10 63 191 1.0E-43 T 21-04-2016 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Gene3D G3DSA:1.10.287.80 237 283 2.1E-29 T 21-04-2016 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 PANTHER PTHR11693 1 288 9.5E-130 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 8.0E-111 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 SUPERFAMILY SSF52943 2 288 1.31E-96 T 21-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APL_RS08755 edf8ee0340f5ac5dca81ed288562b11f 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.552 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Pfam PF11798 IMS family HHH motif 170 200 9.9E-6 T 21-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Pfam PF00817 impB/mucB/samB family 10 157 1.7E-50 T 21-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 PANTHER PTHR11076:SF32 5 341 1.3E-165 T 21-04-2016 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 SUPERFAMILY SSF100879 244 354 3.57E-19 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 342 4.7E-7 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 PANTHER PTHR11076 5 341 1.3E-165 T 21-04-2016 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 SUPERFAMILY SSF56672 3 236 3.65E-95 T 21-04-2016 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Gene3D G3DSA:3.30.1490.100 240 355 9.2E-34 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Gene3D G3DSA:3.30.70.270 69 167 2.0E-35 T 21-04-2016 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Gene3D G3DSA:1.10.150.20 169 237 2.1E-23 T 21-04-2016 APL_RS05435 d3d3041d58cf759ad20f5e252762975e 356 Hamap MF_01113 DNA polymerase IV [dinB]. 4 354 36.12 T 21-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 SUPERFAMILY SSF53822 24 323 6.06E-68 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 Gene3D G3DSA:3.40.50.2300 23 140 6.5E-22 T 21-04-2016 APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 PANTHER PTHR30036:SF2 1 323 1.9E-83 T 21-04-2016 APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 Pfam PF13407 Periplasmic binding protein domain 26 294 1.4E-57 T 21-04-2016 IPR025997 Periplasmic binding protein APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 Gene3D G3DSA:3.40.50.2300 141 285 1.1E-41 T 21-04-2016 APL_RS02315 edb2f92f9f75b6728898208fb0eb8ccb 323 PANTHER PTHR30036 1 323 1.9E-83 T 21-04-2016 APL_RS10475 cf25558f826dd249973da7005c0092b7 406 Pfam PF04143 Sulphur transport 6 162 1.3E-26 T 21-04-2016 IPR007272 Sulphur transport domain APL_RS10475 cf25558f826dd249973da7005c0092b7 406 Pfam PF04143 Sulphur transport 238 390 1.5E-20 T 21-04-2016 IPR007272 Sulphur transport domain APL_RS10475 cf25558f826dd249973da7005c0092b7 406 PANTHER PTHR30574:SF6 5 345 1.0E-203 T 21-04-2016 APL_RS10475 cf25558f826dd249973da7005c0092b7 406 PANTHER PTHR30574 5 345 1.0E-203 T 21-04-2016 APL_RS09795 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890:SF1 20 66 2.9E-12 T 21-04-2016 APL_RS09795 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890 20 66 2.9E-12 T 21-04-2016 APL_RS08180 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890:SF1 20 66 2.9E-12 T 21-04-2016 APL_RS08180 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890 20 66 2.9E-12 T 21-04-2016 APL_RS01300 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890:SF1 20 66 2.9E-12 T 21-04-2016 APL_RS01300 bf17c0343fd3e929fb627203dda7c519 67 PANTHER PTHR34890 20 66 2.9E-12 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.30.420.40 118 194 7.5E-63 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.30.420.40 4 52 7.5E-63 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 SUPERFAMILY SSF53067 1 181 3.77E-63 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PANTHER PTHR19375 2 632 0.0 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.30.30.30 53 105 1.3E-27 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PANTHER PTHR19375:SF173 2 632 0.0 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.4E-289 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-79 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.90.640.10 229 312 2.0E-30 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Pfam PF00012 Hsp70 protein 4 601 2.6E-256 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 628 35.733 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.30.420.40 195 228 1.3E-29 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:3.30.420.40 318 359 1.3E-29 T 21-04-2016 APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:1.20.1270.10 531 601 6.2E-25 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 SUPERFAMILY SSF100934 533 605 1.37E-6 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 SUPERFAMILY SSF100920 383 539 8.37E-62 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 Gene3D G3DSA:2.60.34.10 389 530 3.5E-71 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APL_RS10125 42ea2bea2c71b2fe2d54d93a0f235a50 632 SUPERFAMILY SSF53067 186 381 1.02E-64 T 21-04-2016 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.2E-19 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.2E-19 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.2E-19 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.2E-19 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PANTHER PTHR12128 2 292 7.0E-157 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 4 292 50.503 T 21-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 1.0E-105 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PANTHER PTHR12128:SF30 2 292 7.0E-157 T 21-04-2016 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 21-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 SUPERFAMILY SSF51569 1 287 7.01E-77 T 21-04-2016 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 PIRSF PIRSF001365 1 291 4.9E-64 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 21-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 Gene3D G3DSA:3.20.20.70 3 288 2.1E-78 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 SMART SM01130 3 291 2.9E-75 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS09330 e74562154cfce47ba58295582a9dab13 292 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 4 292 4.1E-152 T 21-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APL_RS08130 6760331fbe8dbf08ad9430d5b97749ba 86 PANTHER PTHR35401:SF1 1 86 1.6E-25 T 21-04-2016 APL_RS08130 6760331fbe8dbf08ad9430d5b97749ba 86 SUPERFAMILY SSF47598 1 79 1.49E-21 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APL_RS08130 6760331fbe8dbf08ad9430d5b97749ba 86 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 3.9E-24 T 21-04-2016 IPR014795 Vibrio phage ICP1, Orf50 APL_RS08130 6760331fbe8dbf08ad9430d5b97749ba 86 Gene3D G3DSA:1.20.5.780 2 81 3.8E-18 T 21-04-2016 APL_RS08130 6760331fbe8dbf08ad9430d5b97749ba 86 PANTHER PTHR35401 1 86 1.6E-25 T 21-04-2016 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 SUPERFAMILY SSF53738 302 439 1.18E-25 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 PANTHER PTHR22573:SF54 26 548 9.3E-203 T 21-04-2016 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 SUPERFAMILY SSF53738 209 313 4.71E-22 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 SUPERFAMILY SSF53738 41 231 9.81E-40 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Gene3D G3DSA:3.40.120.10 31 216 8.8E-57 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Gene3D G3DSA:3.40.120.10 307 442 1.2E-33 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Gene3D G3DSA:3.40.120.10 230 306 3.1E-22 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 188 3.7E-37 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 434 8.1E-16 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 PANTHER PTHR22573 26 548 9.3E-203 T 21-04-2016 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Gene3D G3DSA:3.30.310.50 464 542 2.7E-16 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 313 3.1E-25 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 SUPERFAMILY SSF55957 433 551 2.49E-19 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03100 f359f97ebca8fc8b80aaf05db2e01267 552 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 476 535 2.4E-13 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 558 575 - T 21-04-2016 IPR001882 Biotin-binding site APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 Gene3D G3DSA:3.20.20.70 4 285 1.9E-117 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 Pfam PF00364 Biotin-requiring enzyme 535 601 9.0E-18 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 Pfam PF02436 Conserved carboxylase domain 295 499 1.2E-54 T 21-04-2016 IPR003379 Carboxylase, conserved domain APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 598 7.4E-294 T 21-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 PANTHER PTHR18866 1 601 4.6E-224 T 21-04-2016 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 Pfam PF00682 HMGL-like 7 273 1.4E-67 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 SUPERFAMILY SSF89000 300 465 1.69E-47 T 21-04-2016 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 PANTHER PTHR18866:SF109 1 601 4.6E-224 T 21-04-2016 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 SUPERFAMILY SSF51230 525 601 2.88E-21 T 21-04-2016 IPR011053 Single hybrid motif APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 SUPERFAMILY SSF51569 4 303 5.49E-91 T 21-04-2016 APL_RS07280 b72a039d276f297f88c88d1cafacbf8d 602 Gene3D G3DSA:2.40.50.100 528 601 8.7E-25 T 21-04-2016 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 SUPERFAMILY SSF111148 1 89 3.27E-39 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.782 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.1E-41 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 PIRSF PIRSF029827 1 90 1.9E-43 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 PANTHER PTHR36965 2 87 3.2E-51 T 21-04-2016 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 Gene3D G3DSA:1.10.3880.10 1 90 6.6E-43 T 21-04-2016 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 PANTHER PTHR36965:SF1 2 87 3.2E-51 T 21-04-2016 APL_RS09240 b623a5c75cca9e2db4ba280f80e63ad2 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-37 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 311 2.4E-143 T 21-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 Gene3D G3DSA:3.40.50.1100 132 312 1.3E-72 T 21-04-2016 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 PANTHER PTHR10314 3 312 7.1E-146 T 21-04-2016 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 311 2.9E-134 T 21-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 299 2.0E-68 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 21-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 PANTHER PTHR10314:SF110 3 312 7.1E-146 T 21-04-2016 APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 SUPERFAMILY SSF53686 4 309 7.07E-95 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS01270 8bc55d6a54b8730719aa7945952cc823 316 Gene3D G3DSA:3.40.50.1100 36 131 1.5E-35 T 21-04-2016 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 PANTHER PTHR11544 5 69 9.7E-27 T 21-04-2016 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 3 69 1.7E-34 T 21-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 SUPERFAMILY SSF50249 3 67 1.77E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 SMART SM00357 4 68 1.0E-23 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 6.7E-27 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 21-04-2016 IPR019844 Cold-shock conserved site APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 Gene3D G3DSA:2.40.50.140 4 66 5.8E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 PIRSF PIRSF002599 1 69 5.0E-21 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 PRINTS PR00050 Cold shock protein signature 41 59 1.7E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 PRINTS PR00050 Cold shock protein signature 26 35 1.7E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS03775 d31661f57bc14ef987b222cd2a853a84 69 PRINTS PR00050 Cold shock protein signature 5 20 1.7E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.2E-35 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.216 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 PANTHER PTHR22926:SF5 2 360 1.3E-185 T 21-04-2016 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 9.2E-155 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00075 5389a3779974511334ac9875f7b8df12 360 PANTHER PTHR22926 2 360 1.3E-185 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 SUPERFAMILY SSF53223 4 193 1.89E-75 T 21-04-2016 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 4.3E-32 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 4.3E-32 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 4.3E-32 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 4.3E-32 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 SUPERFAMILY SSF51735 199 445 1.08E-73 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 SMART SM00839 201 444 7.8E-87 T 21-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PANTHER PTHR11606:SF4 4 446 2.7E-250 T 21-04-2016 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 6.3E-52 T 21-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Gene3D G3DSA:3.40.50.720 206 370 4.3E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 444 2.1E-85 T 21-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PIRSF PIRSF000185 19 446 1.2E-118 T 21-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Gene3D G3DSA:3.40.192.10 65 186 7.0E-64 T 21-04-2016 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Gene3D G3DSA:1.10.285.10 4 64 4.6E-27 T 21-04-2016 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 Gene3D G3DSA:1.10.285.10 371 446 6.0E-27 T 21-04-2016 APL_RS02190 12264d63dd4c5e217e5ba8cffec17cde 446 PANTHER PTHR11606 4 446 2.7E-250 T 21-04-2016 APL_RS06710 59b755ec142d38179cefaedc421c45a5 130 Pfam PF02657 Fe-S metabolism associated domain 8 124 9.5E-32 T 21-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APL_RS06710 59b755ec142d38179cefaedc421c45a5 130 SUPERFAMILY SSF82649 2 128 3.61E-33 T 21-04-2016 APL_RS06710 59b755ec142d38179cefaedc421c45a5 130 PANTHER PTHR12735:SF26 6 130 3.5E-23 T 21-04-2016 APL_RS06710 59b755ec142d38179cefaedc421c45a5 130 PANTHER PTHR12735 6 130 3.5E-23 T 21-04-2016 APL_RS06710 59b755ec142d38179cefaedc421c45a5 130 Gene3D G3DSA:3.90.1010.10 2 128 6.7E-32 T 21-04-2016 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 SUPERFAMILY SSF89562 3 156 3.14E-42 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 1.0E-83 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.6E-60 T 21-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 PANTHER PTHR33254:SF7 1 165 4.0E-96 T 21-04-2016 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 PANTHER PTHR33254 1 165 4.0E-96 T 21-04-2016 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 Pfam PF03737 Demethylmenaquinone methyltransferase 7 152 1.5E-35 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.443 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APL_RS10100 117863ce1fb15b8e42d85d8da70a7984 165 Gene3D G3DSA:3.50.30.40 2 156 6.9E-44 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Gene3D G3DSA:3.40.50.300 3 208 4.3E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-17 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.277 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Gene3D G3DSA:2.40.30.10 209 298 7.7E-37 T 21-04-2016 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 SUPERFAMILY SSF52540 6 219 2.22E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Gene3D G3DSA:2.40.30.10 300 393 2.3E-47 T 21-04-2016 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 SUPERFAMILY SSF50447 205 301 1.57E-29 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 21-04-2016 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.4E-34 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.4E-238 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 SUPERFAMILY SSF50465 298 393 2.45E-36 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PANTHER PTHR23115 1 393 4.5E-299 T 21-04-2016 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS07970 49272c98cff91e49e04ca49317c4111c 394 PANTHER PTHR23115:SF151 1 393 4.5E-299 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 11 35 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.3E-93 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 3.0E-9 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 SMART SM00382 93 246 1.0E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 SUPERFAMILY SSF52540 70 292 1.95E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 Gene3D G3DSA:3.40.50.300 61 280 1.8E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 8.0E-232 T 21-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 PANTHER PTHR32472 1 456 6.5E-222 T 21-04-2016 APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 SUPERFAMILY SSF54211 305 456 6.07E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 SUPERFAMILY SSF54211 257 271 6.07E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 Gene3D G3DSA:3.30.230.10 286 456 3.6E-39 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS04600 3f5d061254742bf1aafa7913ac18d210 459 Pfam PF13481 AAA domain 71 224 3.1E-12 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 PANTHER PTHR30176 2 230 3.4E-115 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Pfam PF12838 4Fe-4S dicluster domain 57 112 2.0E-6 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Pfam PF12800 4Fe-4S binding domain 134 152 0.032 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Pfam PF12800 4Fe-4S binding domain 180 193 0.62 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Gene3D G3DSA:3.30.70.20 57 104 1.9E-9 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 PANTHER PTHR30176:SF3 2 230 3.4E-115 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 37 2.5E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Gene3D G3DSA:3.30.70.20 105 140 5.3E-6 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 5 215 1.7E-79 T 21-04-2016 IPR004494 MauM/NapG ferredoxin-type protein APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 Gene3D G3DSA:3.30.70.20 141 194 3.2E-8 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 SUPERFAMILY SSF54862 57 202 6.28E-27 T 21-04-2016 APL_RS07545 3b52c9adc63bed10112c8cebb9eec804 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 Gene3D G3DSA:3.60.140.10 3 244 2.9E-94 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 PANTHER PTHR30616 1 245 7.5E-126 T 21-04-2016 APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 242 1.6E-75 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 PANTHER PTHR30616:SF3 1 245 7.5E-126 T 21-04-2016 APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 SUPERFAMILY SSF64438 4 243 1.5E-85 T 21-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic APL_RS02210 bbfacccd97150f78ed2c026fceea48d5 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 243 5.7E-72 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PANTHER PTHR11702 1 378 9.2E-188 T 21-04-2016 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PANTHER PTHR11702:SF3 1 378 9.2E-188 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PIRSF PIRSF002401 1 376 5.8E-139 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 8.6E-145 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 SUPERFAMILY SSF82051 2 157 6.15E-56 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 Gene3D G3DSA:3.40.50.300 160 344 2.9E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 Gene3D G3DSA:2.70.210.12 2 156 2.9E-59 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.432 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 Pfam PF01926 50S ribosome-binding GTPase 162 284 2.3E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.8E-33 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.8E-33 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.8E-33 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.8E-33 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 21-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 Pfam PF01018 GTP1/OBG 3 157 5.3E-59 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APL_RS00200 b6c85df1b707d2d82adc444fbd3dc1f8 391 SUPERFAMILY SSF52540 151 339 2.18E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 9.8E-11 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 PANTHER PTHR11751:SF386 114 457 8.9E-55 T 21-04-2016 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 SUPERFAMILY SSF53383 115 452 2.45E-66 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 SMART SM00345 10 69 7.2E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 PANTHER PTHR11751 114 457 8.9E-55 T 21-04-2016 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 SUPERFAMILY SSF46785 3 73 4.6E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 Pfam PF00155 Aminotransferase class I and II 136 447 1.6E-26 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 Gene3D G3DSA:3.40.640.10 140 354 6.4E-50 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS05705 24b006f5c260600eb2a926538e2e6234 462 Gene3D G3DSA:1.10.10.10 2 72 3.0E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 164 18.508 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.1E-30 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 5.9E-31 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 5.9E-31 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 5.9E-31 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 PANTHER PTHR33162:SF4 2 194 5.0E-50 T 21-04-2016 APL_RS10530 4961b45c8cdbcf54aa34630641540142 195 PANTHER PTHR33162 2 194 5.0E-50 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Pfam PF03454 MoeA C-terminal region (domain IV) 337 408 7.5E-16 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Gene3D G3DSA:3.90.105.10 144 164 1.4E-20 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Gene3D G3DSA:3.90.105.10 24 46 1.4E-20 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Gene3D G3DSA:3.40.980.10 165 331 3.1E-65 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 SUPERFAMILY SSF63867 334 412 4.71E-22 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 169 5.0E-37 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Gene3D G3DSA:2.170.190.11 47 143 1.2E-28 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Gene3D G3DSA:2.40.340.10 335 406 3.9E-29 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 SUPERFAMILY SSF53218 179 323 3.4E-44 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 288 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 SUPERFAMILY SSF63882 3 178 4.32E-52 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 SMART SM00852 182 319 2.2E-42 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 PANTHER PTHR10192:SF11 3 412 2.7E-200 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 315 9.1E-34 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 PANTHER PTHR10192 3 412 2.7E-200 T 21-04-2016 APL_RS01600 1fcea97e9159c86a274a5d54c25cd203 413 Pfam PF00994 Probable molybdopterin binding domain 182 318 3.3E-28 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 Gene3D G3DSA:3.40.50.300 361 571 4.6E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 554 2.2E-174 T 21-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 SUPERFAMILY SSF90123 7 329 8.76E-49 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 Gene3D G3DSA:1.20.1560.10 11 329 9.5E-39 T 21-04-2016 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 Pfam PF00005 ABC transporter 367 512 8.2E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 SMART SM00382 375 558 4.2E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 SUPERFAMILY SSF52540 352 577 1.09E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 PANTHER PTHR24221 1 577 1.3E-294 T 21-04-2016 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 Pfam PF00664 ABC transporter transmembrane region 27 293 1.8E-30 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04335 c2b2c70b50bec9bc0758139a67efa18f 580 PANTHER PTHR24221:SF261 1 577 1.3E-294 T 21-04-2016 APL_RS01065 81230f43aab83a0edd168520e69656fb 112 PANTHER PTHR32552 1 112 5.6E-30 T 21-04-2016 APL_RS01065 81230f43aab83a0edd168520e69656fb 112 Gene3D G3DSA:3.30.420.10 4 98 2.5E-17 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS01065 81230f43aab83a0edd168520e69656fb 112 SUPERFAMILY SSF53098 4 101 1.12E-19 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS01065 81230f43aab83a0edd168520e69656fb 112 Pfam PF13333 Integrase core domain 56 111 2.4E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 135 153 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 204 224 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 165 187 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.2E-54 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 Pfam PF00230 Major intrinsic protein 2 221 5.6E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 SUPERFAMILY SSF81338 1 225 1.83E-69 T 21-04-2016 IPR023271 Aquaporin-like APL_RS07690 e6b96524578b05f1b6cb858122498516 228 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 4.4E-62 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.874 T 21-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PANTHER PTHR19139:SF103 1 227 2.2E-76 T 21-04-2016 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 PANTHER PTHR19139 1 227 2.2E-76 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS07690 e6b96524578b05f1b6cb858122498516 228 Gene3D G3DSA:1.20.1080.10 1 227 1.3E-71 T 21-04-2016 IPR023271 Aquaporin-like APL_RS07690 e6b96524578b05f1b6cb858122498516 228 ProSitePatterns PS00221 MIP family signature. 60 68 - T 21-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Pfam PF01467 Cytidylyltransferase-like 68 212 2.0E-4 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 PIRSF PIRSF004776 3 414 1.8E-176 T 21-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 SUPERFAMILY SSF52540 231 402 1.72E-29 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 SUPERFAMILY SSF47413 5 57 1.04E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 65 134 4.8E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Pfam PF13521 AAA domain 234 394 2.5E-28 T 21-04-2016 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Gene3D G3DSA:1.10.260.40 6 57 1.2E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 SMART SM00530 6 62 5.3E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.1E-148 T 21-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Gene3D G3DSA:3.40.50.300 231 399 7.7E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 SUPERFAMILY SSF52374 63 224 3.66E-23 T 21-04-2016 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 PANTHER PTHR37512 14 417 6.7E-126 T 21-04-2016 APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Gene3D G3DSA:3.40.50.620 63 230 7.5E-51 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00230 e509f474e27f7d81938fd16eff4beedb 426 Pfam PF01381 Helix-turn-helix 7 57 1.0E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Pfam PF16326 ABC transporter C-terminal domain 572 640 2.3E-19 T 21-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 PANTHER PTHR19211 1 527 1.3E-238 T 21-04-2016 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 PANTHER PTHR19211 544 582 1.3E-238 T 21-04-2016 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Gene3D G3DSA:3.40.50.300 5 102 1.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Gene3D G3DSA:3.40.50.300 136 282 1.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 SUPERFAMILY SSF52540 306 543 3.07E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Pfam PF12848 ABC transporter 224 297 1.0E-9 T 21-04-2016 IPR032781 ABC-transporter extension domain APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 SMART SM00382 28 230 2.3E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 SMART SM00382 344 515 2.5E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Pfam PF00005 ABC transporter 19 185 6.3E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Pfam PF00005 ABC transporter 335 469 5.9E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 SUPERFAMILY SSF52540 126 244 1.95E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 SUPERFAMILY SSF52540 4 94 1.95E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 PANTHER PTHR19211:SF45 1 527 1.3E-238 T 21-04-2016 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 PANTHER PTHR19211:SF45 544 582 1.3E-238 T 21-04-2016 APL_RS01510 d76ee175e58fcf0acc0af54e635d38b3 647 Gene3D G3DSA:3.40.50.300 318 554 6.9E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 Gene3D G3DSA:3.40.50.300 340 554 1.1E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 Gene3D G3DSA:1.20.1560.10 7 322 4.3E-29 T 21-04-2016 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 Pfam PF00005 ABC transporter 359 505 2.5E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 SMART SM00382 368 552 6.7E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 Pfam PF00664 ABC transporter transmembrane region 59 270 3.7E-7 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 3.4E-137 T 21-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 PANTHER PTHR24222:SF30 6 554 1.8E-206 T 21-04-2016 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 PANTHER PTHR24222 6 554 1.8E-206 T 21-04-2016 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 SUPERFAMILY SSF90123 7 322 3.01E-40 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04330 6a771f98953848d4c6fa03886dcc68f0 555 SUPERFAMILY SSF52540 332 554 2.8E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03675 1a812c878c3e3401ea7619320156110f 962 Pfam PF01555 DNA methylase 422 736 1.2E-29 T 21-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 Gene3D G3DSA:3.40.50.150 399 550 5.6E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03675 1a812c878c3e3401ea7619320156110f 962 Gene3D G3DSA:3.40.50.150 634 764 5.6E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 726 746 8.7E-8 T 21-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 697 715 8.7E-8 T 21-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 421 435 8.7E-8 T 21-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 SUPERFAMILY SSF53335 392 579 1.17E-47 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03675 1a812c878c3e3401ea7619320156110f 962 SUPERFAMILY SSF53335 650 756 1.17E-47 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PANTHER PTHR13370 304 607 2.9E-27 T 21-04-2016 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PANTHER PTHR13370 647 749 2.9E-27 T 21-04-2016 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PANTHER PTHR13370:SF7 304 607 2.9E-27 T 21-04-2016 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 PANTHER PTHR13370:SF7 647 749 2.9E-27 T 21-04-2016 APL_RS03675 1a812c878c3e3401ea7619320156110f 962 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 425 431 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 PANTHER PTHR32120 3 344 5.3E-151 T 21-04-2016 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 SUPERFAMILY SSF52540 110 333 5.58E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 Gene3D G3DSA:1.10.40.50 271 338 1.1E-23 T 21-04-2016 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 Gene3D G3DSA:3.40.50.300 112 270 1.0E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 71 329 1.9E-94 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 Pfam PF03193 Protein of unknown function, DUF258 96 271 4.9E-58 T 21-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 Gene3D G3DSA:2.40.50.140 38 98 3.7E-7 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 PANTHER PTHR32120:SF2 3 344 5.3E-151 T 21-04-2016 APL_RS00675 05505bebaa7fe676f08e2965a83b669f 344 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 38 335 37.449 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 SUPERFAMILY SSF56176 18 192 1.45E-50 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 SUPERFAMILY SSF56176 243 285 1.45E-50 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 SUPERFAMILY SSF46548 564 625 3.66E-8 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 SUPERFAMILY SSF46548 655 694 3.66E-8 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 675 686 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Pfam PF13183 4Fe-4S dicluster domain 578 689 7.4E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Gene3D G3DSA:3.30.465.10 110 199 1.3E-41 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Gene3D G3DSA:3.30.465.10 233 285 1.3E-41 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Pfam PF01565 FAD binding domain 52 192 5.6E-34 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 SUPERFAMILY SSF55103 260 545 5.89E-53 T 21-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Gene3D G3DSA:1.10.1060.10 519 622 1.4E-16 T 21-04-2016 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Gene3D G3DSA:1.10.1060.10 656 708 1.4E-16 T 21-04-2016 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Gene3D G3DSA:3.30.43.10 5 109 2.6E-23 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 PANTHER PTHR11748:SF35 18 198 2.7E-172 T 21-04-2016 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 PANTHER PTHR11748:SF35 250 590 2.7E-172 T 21-04-2016 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 542 8.5E-62 T 21-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 PANTHER PTHR11748 18 198 2.7E-172 T 21-04-2016 APL_RS07515 61a6a36815d72886870f9cade5d4a583 1029 PANTHER PTHR11748 250 590 2.7E-172 T 21-04-2016 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PANTHER PTHR30035 1 249 1.6E-92 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PRINTS PR01805 VacJ lipoprotein signature 31 44 1.4E-27 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PRINTS PR01805 VacJ lipoprotein signature 49 65 1.4E-27 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PRINTS PR01805 VacJ lipoprotein signature 139 156 1.4E-27 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PRINTS PR01805 VacJ lipoprotein signature 100 117 1.4E-27 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 PANTHER PTHR30035:SF3 1 249 1.6E-92 T 21-04-2016 APL_RS10185 9d3371a79e27e6cdc4734bffd3a72543 249 Pfam PF04333 MlaA lipoprotein 30 224 8.8E-66 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 PIRSF PIRSF000538 1 477 1.9E-81 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 Gene3D G3DSA:3.30.420.40 258 476 6.0E-36 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 PANTHER PTHR10196:SF60 1 472 4.4E-227 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 Gene3D G3DSA:3.30.420.40 5 250 3.7E-54 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 SUPERFAMILY SSF53067 7 253 6.7E-59 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 443 1.2E-27 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 PANTHER PTHR10196 1 472 4.4E-227 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 Hamap MF_00986 L-fuculokinase [fucK]. 1 471 61.126 T 21-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 SUPERFAMILY SSF53067 256 473 5.18E-41 T 21-04-2016 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 2 470 9.5E-215 T 21-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 APL_RS08945 ef10854ad6ee32806c34b617064ae707 477 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 4.1E-82 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 Gene3D G3DSA:3.40.30.10 1 130 3.9E-52 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 PANTHER PTHR30041 1 134 3.0E-39 T 21-04-2016 APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 SUPERFAMILY SSF52833 3 132 1.55E-35 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 115 7.2E-39 T 21-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 PANTHER PTHR30041:SF0 1 134 3.0E-39 T 21-04-2016 APL_RS05680 5a35fd05b1d69f58e6e7c4c88909231a 134 Pfam PF03960 ArsC family 7 115 1.8E-19 T 21-04-2016 IPR006660 Arsenate reductase-like APL_RS03795 aabb1929eeef9845b08ac124bc95dd8c 449 SUPERFAMILY SSF111283 14 449 1.26E-121 T 21-04-2016 APL_RS03795 aabb1929eeef9845b08ac124bc95dd8c 449 PANTHER PTHR30624:SF1 8 449 1.0E-164 T 21-04-2016 APL_RS03795 aabb1929eeef9845b08ac124bc95dd8c 449 PANTHER PTHR30624 8 449 1.0E-164 T 21-04-2016 APL_RS03795 aabb1929eeef9845b08ac124bc95dd8c 449 Pfam PF01523 Putative modulator of DNA gyrase 33 325 1.5E-50 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 PANTHER PTHR13794:SF8 6 307 1.6E-73 T 21-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 310 22.18 T 21-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 Gene3D G3DSA:3.30.390.10 1 131 5.5E-34 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 Gene3D G3DSA:3.20.20.120 132 292 8.4E-42 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 SUPERFAMILY SSF51604 120 298 4.85E-42 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 Pfam PF13378 Enolase C-terminal domain-like 128 274 1.2E-10 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 SUPERFAMILY SSF54826 1 95 5.5E-25 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 301 2.6E-86 T 21-04-2016 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 PANTHER PTHR13794 6 307 1.6E-73 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APL_RS01820 ef442c7a88db3f870e129858f7d5c09c 320 SMART SM00922 112 205 1.8E-7 T 21-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APL_RS02455 0f1396c10561669eca90caff30f36312 111 PANTHER PTHR33930:SF2 1 108 2.5E-30 T 21-04-2016 APL_RS02455 0f1396c10561669eca90caff30f36312 111 Gene3D G3DSA:1.20.1290.10 2 109 7.6E-34 T 21-04-2016 IPR029032 AhpD-like APL_RS02455 0f1396c10561669eca90caff30f36312 111 PANTHER PTHR33930 1 108 2.5E-30 T 21-04-2016 APL_RS02455 0f1396c10561669eca90caff30f36312 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 90 2.0E-18 T 21-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS02455 0f1396c10561669eca90caff30f36312 111 SUPERFAMILY SSF69118 4 108 1.02E-27 T 21-04-2016 IPR029032 AhpD-like APL_RS02455 0f1396c10561669eca90caff30f36312 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 105 2.0E-20 T 21-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 Gene3D G3DSA:3.40.50.450 2 183 8.9E-63 T 21-04-2016 APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 Pfam PF03641 Possible lysine decarboxylase 45 171 1.3E-35 T 21-04-2016 IPR031100 LOG family APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 178 6.8E-51 T 21-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 PANTHER PTHR31223 2 180 9.2E-78 T 21-04-2016 APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 PANTHER PTHR31223:SF0 2 180 9.2E-78 T 21-04-2016 APL_RS10400 f00e30a0a0f7f4e9d7e3df4cd851142f 186 SUPERFAMILY SSF102405 1 178 5.8E-58 T 21-04-2016 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 Gene3D G3DSA:2.30.110.10 5 183 8.8E-39 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 Pfam PF01613 Flavin reductase like domain 19 150 3.2E-15 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 SMART SM00903 13 154 1.6E-9 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 PANTHER PTHR30466 8 187 2.2E-21 T 21-04-2016 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 SUPERFAMILY SSF50475 8 183 4.37E-33 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS06345 5fb557954a1610a73fa58eef521ed8b3 187 PANTHER PTHR30466:SF6 8 187 2.2E-21 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799 478 583 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799 886 933 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799 360 409 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799 34 309 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799 432 450 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 Pfam PF00176 SNF2 family N-terminal domain 54 341 3.7E-33 T 21-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 Gene3D G3DSA:3.40.50.300 406 594 3.8E-29 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799:SF688 478 583 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799:SF688 886 933 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799:SF688 360 409 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799:SF688 34 309 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 PANTHER PTHR10799:SF688 432 450 5.3E-62 T 21-04-2016 APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SUPERFAMILY SSF52540 21 236 1.92E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SMART SM00490 477 552 1.8E-17 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SUPERFAMILY SSF52540 399 451 4.38E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SUPERFAMILY SSF52540 480 597 4.38E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SUPERFAMILY SSF52540 160 219 4.38E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 Pfam PF00271 Helicase conserved C-terminal domain 446 552 7.4E-17 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 Gene3D G3DSA:3.40.50.300 33 214 4.9E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03665 de77ff4ef7dc0fddf1319e3194ca00fc 957 SMART SM00487 33 233 1.4E-22 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Pfam PF16124 RecQ zinc-binding 338 399 1.2E-14 T 21-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SUPERFAMILY SSF52540 9 195 2.33E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SMART SM00487 17 213 1.9E-30 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS05820 a466be791ac79624e143a4f8740304b6 602 PANTHER PTHR13710:SF81 5 602 1.6E-291 T 21-04-2016 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 459 2.0E-194 T 21-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SUPERFAMILY SSF47819 524 600 2.62E-26 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 597 3.8E-252 T 21-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SUPERFAMILY SSF52540 203 451 1.12E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Gene3D G3DSA:3.40.50.300 8 199 1.3E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Gene3D G3DSA:3.40.50.300 202 339 7.0E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05820 a466be791ac79624e143a4f8740304b6 602 PANTHER PTHR13710 5 602 1.6E-291 T 21-04-2016 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Pfam PF00271 Helicase conserved C-terminal domain 220 324 1.3E-19 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Pfam PF09382 RQC domain 401 509 7.5E-38 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SMART SM00490 245 326 7.9E-28 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SMART SM00956 406 509 1.7E-51 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Gene3D G3DSA:1.10.10.10 340 509 2.0E-60 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Gene3D G3DSA:1.10.150.80 525 601 5.9E-25 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Pfam PF00270 DEAD/DEAH box helicase 24 180 1.8E-16 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 Pfam PF00570 HRDC domain 528 594 3.9E-22 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APL_RS05820 a466be791ac79624e143a4f8740304b6 602 SMART SM00341 524 602 3.4E-21 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 Gene3D G3DSA:3.60.120.10 6 511 6.7E-146 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PRINTS PR00095 Anthranilate synthase component I signature 350 363 9.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PRINTS PR00095 Anthranilate synthase component I signature 459 473 9.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PRINTS PR00095 Anthranilate synthase component I signature 444 458 9.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PRINTS PR00095 Anthranilate synthase component I signature 364 377 9.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PANTHER PTHR11236 3 516 2.8E-232 T 21-04-2016 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 Pfam PF00425 chorismate binding enzyme 242 502 3.2E-84 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 12 515 4.5E-235 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 SUPERFAMILY SSF56322 6 510 3.01E-150 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PANTHER PTHR11236:SF22 3 516 2.8E-232 T 21-04-2016 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 190 6.3E-12 T 21-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06085 7aa54b239bf3e329a2f1e06fa143fd51 516 PIRSF PIRSF001373 1 516 1.8E-241 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.1E-147 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PANTHER PTHR11117 1 290 8.4E-197 T 21-04-2016 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 SUPERFAMILY SSF51735 1 122 4.4E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 Pfam PF02629 CoA binding domain 6 99 1.6E-31 T 21-04-2016 IPR003781 CoA-binding GO:0048037 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 SUPERFAMILY SSF52210 123 288 1.31E-55 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 SMART SM00881 4 100 2.7E-36 T 21-04-2016 IPR003781 CoA-binding GO:0048037 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 Gene3D G3DSA:3.40.50.720 3 119 3.9E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.8E-41 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.8E-41 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.8E-41 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.8E-41 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 Pfam PF00549 CoA-ligase 151 270 6.1E-21 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 21-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 PIRSF PIRSF001553 1 290 2.3E-136 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APL_RS02320 e8306b4d47c6cceeb42193c0838964f3 290 Gene3D G3DSA:3.40.50.261 120 287 6.2E-78 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PANTHER PTHR30070:SF1 1 220 2.3E-63 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 1.8E-85 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PIRSF PIRSF002764 1 220 9.8E-75 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 132 155 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 2.1E-64 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 Pfam PF03379 CcmB protein 4 217 6.7E-82 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07225 43c669168eebb22dedd354d2fc64c27a 220 PANTHER PTHR30070 1 220 2.3E-63 T 21-04-2016 APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 ProSitePatterns PS00194 Thioredoxin family active site. 492 510 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Gene3D G3DSA:2.60.40.1250 24 141 2.7E-40 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Gene3D G3DSA:3.40.30.10 475 582 5.4E-34 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 SUPERFAMILY SSF74863 27 139 1.24E-35 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Pfam PF13098 Thioredoxin-like domain 485 580 5.9E-12 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 PANTHER PTHR32234 1 583 4.1E-195 T 21-04-2016 APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 PANTHER PTHR32234:SF0 1 583 4.1E-195 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 189 394 1.6E-18 T 21-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 SUPERFAMILY SSF52833 472 582 1.19E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 3.1E-33 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APL_RS07150 c696a655459eba1a1633a17ebe4ddc54 583 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 583 36.568 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 PANTHER PTHR40275:SF1 7 95 5.6E-24 T 21-04-2016 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 Pfam PF01381 Helix-turn-helix 53 95 1.1E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 SUPERFAMILY SSF47413 36 95 1.38E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 PANTHER PTHR40275 7 95 5.6E-24 T 21-04-2016 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 Gene3D G3DSA:1.10.260.40 52 95 3.7E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS09285 993de0f7f749a05e0309923f3f199e9e 102 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 11 95 6.2E-36 T 21-04-2016 IPR014057 Addiction module antidote protein, HI1420 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Pfam PF01546 Peptidase family M20/M25/M40 74 376 3.5E-32 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 SUPERFAMILY SSF55031 179 288 2.54E-21 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Pfam PF07687 Peptidase dimerisation domain 176 286 6.4E-25 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 375 1.4E-136 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 SUPERFAMILY SSF53187 303 379 1.31E-56 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 SUPERFAMILY SSF53187 5 178 1.31E-56 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Gene3D G3DSA:3.30.70.360 188 286 1.4E-23 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Gene3D G3DSA:3.40.630.10 321 379 1.4E-61 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Gene3D G3DSA:3.40.630.10 4 187 1.4E-61 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 PANTHER PTHR11014 6 379 5.4E-183 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 PANTHER PTHR11014:SF75 6 379 5.4E-183 T 21-04-2016 APL_RS05660 ab7c5223a8efcc946255902f274a0002 380 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 380 62.848 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APL_RS06275 1887f31aab7b4dc890cdde6fbcc794ec 141 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.3E-40 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APL_RS06275 1887f31aab7b4dc890cdde6fbcc794ec 141 PIRSF PIRSF018267 1 141 1.1E-54 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APL_RS06275 1887f31aab7b4dc890cdde6fbcc794ec 141 Pfam PF03852 DNA mismatch endonuclease Vsr 2 75 6.8E-36 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APL_RS06275 1887f31aab7b4dc890cdde6fbcc794ec 141 SUPERFAMILY SSF52980 3 132 2.57E-49 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS06275 1887f31aab7b4dc890cdde6fbcc794ec 141 Gene3D G3DSA:3.40.960.10 21 129 6.7E-46 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 PANTHER PTHR38025:SF1 4 98 6.3E-34 T 21-04-2016 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 94 4.0E-25 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 Hamap MF_00475 Trp operon repressor [trpR]. 9 102 21.716 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 5 98 4.0E-36 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 SUPERFAMILY SSF48295 2 98 4.55E-30 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 PANTHER PTHR38025 4 98 6.3E-34 T 21-04-2016 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 Pfam PF01371 Trp repressor protein 11 97 6.5E-31 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 PIRSF PIRSF003196 4 102 1.1E-36 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APL_RS02445 09153a862cff4a7f610303ae6604c513 102 Gene3D G3DSA:1.10.1270.10 5 100 1.3E-37 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APL_RS06480 808b8b329fb1173979d668cb7d15f1b1 528 PANTHER PTHR30252 1 514 2.5E-165 T 21-04-2016 APL_RS06480 808b8b329fb1173979d668cb7d15f1b1 528 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 370 479 2.4E-20 T 21-04-2016 IPR025299 CstA, C-terminal domain APL_RS06480 808b8b329fb1173979d668cb7d15f1b1 528 Pfam PF02554 Carbon starvation protein CstA 192 333 3.7E-16 T 21-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APL_RS06480 808b8b329fb1173979d668cb7d15f1b1 528 Pfam PF02554 Carbon starvation protein CstA 4 153 6.4E-32 T 21-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 PANTHER PTHR11700 1 102 1.1E-55 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 21-04-2016 IPR027486 Ribosomal protein S10 domain APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 21-04-2016 IPR027486 Ribosomal protein S10 domain APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 21-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 21-04-2016 IPR027486 Ribosomal protein S10 domain APL_RS09355 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 21-04-2016 IPR027486 Ribosomal protein S10 domain APL_RS00195 24523b98806f0f7764a34b277f407c37 575 SUPERFAMILY SSF47323 454 575 5.1E-37 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Gene3D G3DSA:3.30.1360.70 2 102 4.5E-35 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 SMART SM01016 5 87 7.4E-30 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PANTHER PTHR11956 1 575 3.5E-257 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Pfam PF00750 tRNA synthetases class I (R) 101 446 7.1E-166 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 7.0E-27 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 7.0E-27 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 7.0E-27 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 7.0E-27 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 575 3.6E-204 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 575 27.712 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 SUPERFAMILY SSF55190 2 96 8.89E-25 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Gene3D G3DSA:1.10.730.10 454 575 2.8E-37 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 PANTHER PTHR11956:SF1 1 575 3.5E-257 T 21-04-2016 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Gene3D G3DSA:3.40.50.620 109 453 2.4E-114 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.0E-21 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 Pfam PF05746 DALR anticodon binding domain 460 575 4.9E-34 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 SUPERFAMILY SSF52374 108 453 5.25E-94 T 21-04-2016 APL_RS00195 24523b98806f0f7764a34b277f407c37 575 SMART SM00836 460 575 4.1E-39 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Pfam PF00206 Lyase 6 301 3.7E-86 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.5E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.5E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.5E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.5E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PANTHER PTHR11444 3 456 2.2E-232 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Gene3D G3DSA:1.20.200.10 108 374 3.7E-101 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.3E-24 T 21-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 SUPERFAMILY SSF48557 3 453 3.61E-139 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-66 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Gene3D G3DSA:1.10.40.30 375 432 8.2E-30 T 21-04-2016 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Gene3D G3DSA:1.10.275.10 1 107 1.0E-36 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 PANTHER PTHR11444:SF3 3 456 2.2E-232 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.1E-201 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS06170 3768b53417f940ef2109bd98768b56a0 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.879 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 SUPERFAMILY SSF47598 1 35 8.15E-14 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 PIRSF PIRSF019401 1 186 5.0E-52 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 Pfam PF03925 SeqA protein C-terminal domain 74 182 9.1E-44 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 Gene3D G3DSA:1.10.1220.10 1 39 8.6E-25 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 SUPERFAMILY SSF82808 69 184 5.23E-45 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 Gene3D G3DSA:1.20.1380.10 72 184 4.8E-43 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APL_RS03910 31faa9c2d61a00e6eb590b5f3be3f390 186 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 185 42.406 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 PIRSF PIRSF001359 12 358 3.5E-91 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 Gene3D G3DSA:3.20.20.70 10 356 8.3E-124 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 13 357 3.3E-114 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 PANTHER PTHR30559 1 358 1.2E-244 T 21-04-2016 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 PANTHER PTHR30559:SF0 1 358 1.2E-244 T 21-04-2016 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 SUPERFAMILY SSF51569 1 356 2.2E-130 T 21-04-2016 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.9E-176 T 21-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS06525 3fb6df2096b5302723f36abfd1e37a4e 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 16 356 1.6E-91 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SUPERFAMILY SSF52540 566 797 1.6E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SMART SM00533 284 590 4.8E-104 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Gene3D G3DSA:3.40.1170.10 3 121 2.6E-51 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Gene3D G3DSA:3.40.50.300 566 796 5.9E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Pfam PF01624 MutS domain I 9 120 5.2E-41 T 21-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Pfam PF05192 MutS domain III 270 558 8.7E-39 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 PANTHER PTHR11361 3 863 0.0 T 21-04-2016 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Pfam PF05190 MutS family domain IV 427 516 1.5E-28 T 21-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 861 0.0 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Gene3D G3DSA:3.30.420.110 127 256 7.5E-40 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 PANTHER PTHR11361:SF86 3 863 0.0 T 21-04-2016 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SMART SM00534 606 793 8.8E-118 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Gene3D G3DSA:1.10.1420.10 265 467 1.7E-54 T 21-04-2016 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SUPERFAMILY SSF55271 3 114 6.54E-43 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 PIRSF PIRSF037677 2 839 9.6E-157 T 21-04-2016 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Pfam PF05188 MutS domain II 129 253 4.0E-28 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Pfam PF00488 MutS domain V 609 796 3.2E-87 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SUPERFAMILY SSF48334 268 565 3.79E-85 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 SUPERFAMILY SSF53150 115 267 1.44E-40 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APL_RS08505 bb69980848fdcd1909807f4404b2efb8 864 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 8 855 25.097 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 PANTHER PTHR11262 5 416 7.1E-231 T 21-04-2016 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 SUPERFAMILY SSF57716 8 43 5.42E-9 T 21-04-2016 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Pfam PF07724 AAA domain (Cdc48 subfamily) 116 314 4.3E-47 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 PANTHER PTHR11262:SF4 5 416 7.1E-231 T 21-04-2016 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 SMART SM00994 7 46 1.6E-16 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Gene3D G3DSA:3.40.50.300 298 315 4.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Gene3D G3DSA:3.40.50.300 65 257 4.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 419 49.354 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 418 1.4E-192 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 SUPERFAMILY SSF52540 61 396 2.77E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 SMART SM00382 115 386 5.2E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 321 403 2.6E-16 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Pfam PF06689 ClpX C4-type zinc finger 9 44 7.8E-14 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 Gene3D G3DSA:1.10.8.60 320 417 1.4E-34 T 21-04-2016 APL_RS06700 17cb9077caff89e006f56b259a92ee46 419 SMART SM01086 321 418 3.2E-32 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 2.1E-31 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 21-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 21-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 PANTHER PTHR22748 1 267 9.7E-131 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 Gene3D G3DSA:3.60.10.10 1 266 1.2E-85 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 SUPERFAMILY SSF56219 1 267 9.42E-86 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.2E-106 T 21-04-2016 APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.9E-93 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APL_RS05120 151da37b16747a34e74687d5d2c949fa 267 PANTHER PTHR22748:SF7 1 267 9.7E-131 T 21-04-2016 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 125 7.7E-42 T 21-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 265 34.979 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 Gene3D G3DSA:3.40.50.720 2 163 3.3E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 SUPERFAMILY SSF51735 236 268 3.16E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 SUPERFAMILY SSF51735 3 126 3.16E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 21-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.9E-44 T 21-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 PIRSF PIRSF000161 1 268 7.9E-92 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 SUPERFAMILY SSF55347 127 236 1.7E-36 T 21-04-2016 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 PANTHER PTHR20836 1 269 7.3E-104 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 265 5.4E-112 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS03570 0c680d01eff48574da76e05973b86c2a 269 PANTHER PTHR20836:SF0 1 269 7.3E-104 T 21-04-2016 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 PANTHER PTHR30602 1 435 4.4E-227 T 21-04-2016 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 Pfam PF00696 Amino acid kinase family 23 255 2.8E-24 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 PIRSF PIRSF000423 1 435 2.3E-195 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 Pfam PF00583 Acetyltransferase (GNAT) family 334 394 4.1E-5 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 434 2.1E-174 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 PANTHER PTHR30602:SF3 1 435 4.4E-227 T 21-04-2016 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 Gene3D G3DSA:3.40.1160.10 21 283 8.4E-63 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 SUPERFAMILY SSF55729 290 415 2.23E-15 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS03640 564d02be874c74fceae00a4f8744049b 437 SUPERFAMILY SSF53633 3 285 5.11E-64 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03640 564d02be874c74fceae00a4f8744049b 437 Gene3D G3DSA:3.40.630.30 287 432 5.7E-36 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS03640 564d02be874c74fceae00a4f8744049b 437 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 435 209.559 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 PANTHER PTHR10657 202 517 4.8E-127 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 PANTHER PTHR10657 1 174 4.8E-127 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 SUPERFAMILY SSF109998 38 168 6.28E-26 T 21-04-2016 IPR027304 Trigger factor/SurA domain APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 SUPERFAMILY SSF109998 202 241 6.28E-26 T 21-04-2016 IPR027304 Trigger factor/SurA domain APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 Pfam PF13145 PPIC-type PPIASE domain 248 371 1.9E-21 T 21-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 Pfam PF13624 SurA N-terminal domain 1 165 9.2E-42 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 296 317 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 Gene3D G3DSA:3.10.50.40 260 380 2.9E-37 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 SUPERFAMILY SSF54534 225 357 1.96E-29 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 PANTHER PTHR10657:SF13 202 517 4.8E-127 T 21-04-2016 APL_RS05250 2ade4fd4f3f01d598b9b6d1c80f864d3 625 PANTHER PTHR10657:SF13 1 174 4.8E-127 T 21-04-2016 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 294 6.6E-22 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PIRSF PIRSF001438 1 309 3.5E-122 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 SUPERFAMILY SSF53850 4 218 2.41E-87 T 21-04-2016 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 SUPERFAMILY SSF54782 219 308 3.79E-28 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Gene3D G3DSA:3.40.190.10 2 109 1.3E-50 T 21-04-2016 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 212 4.8E-80 T 21-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Gene3D G3DSA:3.30.160.40 220 305 2.6E-28 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PANTHER PTHR11557 1 307 6.3E-164 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 296 4.9E-116 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 296 39.35 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 1.1E-50 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.1E-50 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 1.1E-50 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 1.1E-50 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 1.1E-50 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 Gene3D G3DSA:3.40.190.10 110 198 1.3E-40 T 21-04-2016 APL_RS05285 b6007cc1a4fc089421b29f92c2a7f52c 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 21-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 PANTHER PTHR11986 12 453 1.2E-210 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 Gene3D G3DSA:3.90.1150.10 18 71 1.1E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 Gene3D G3DSA:3.90.1150.10 338 446 1.1E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 453 2.6E-255 T 21-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 Pfam PF00202 Aminotransferase class-III 35 443 5.5E-97 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 SUPERFAMILY SSF53383 25 445 9.28E-122 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 Gene3D G3DSA:3.40.640.10 72 336 4.9E-76 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS10460 54f532bff70bd28af9a4d10533ad4378 454 PANTHER PTHR11986:SF7 12 453 1.2E-210 T 21-04-2016 APL_RS02245 9715b36f78977387a2a923c04169baff 349 Pfam PF04085 rod shape-determining protein MreC 123 269 1.1E-37 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APL_RS02245 9715b36f78977387a2a923c04169baff 349 PANTHER PTHR34138:SF1 1 348 1.4E-80 T 21-04-2016 APL_RS02245 9715b36f78977387a2a923c04169baff 349 PANTHER PTHR34138 1 348 1.4E-80 T 21-04-2016 APL_RS02245 9715b36f78977387a2a923c04169baff 349 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 272 4.0E-102 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APL_RS09825 a0be186582f402e16deb840171bf3430 320 Pfam PF00009 Elongation factor Tu GTP binding domain 2 102 4.4E-7 T 21-04-2016 APL_RS09825 a0be186582f402e16deb840171bf3430 320 SUPERFAMILY SSF52540 2 105 5.68E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09825 a0be186582f402e16deb840171bf3430 320 SUPERFAMILY SSF50447 120 210 5.61E-18 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS09825 a0be186582f402e16deb840171bf3430 320 SUPERFAMILY SSF50465 215 317 2.73E-30 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APL_RS09825 a0be186582f402e16deb840171bf3430 320 Pfam PF03144 Elongation factor Tu domain 2 146 205 3.8E-7 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS09825 a0be186582f402e16deb840171bf3430 320 PANTHER PTHR23115 1 206 9.2E-25 T 21-04-2016 APL_RS09825 a0be186582f402e16deb840171bf3430 320 Gene3D G3DSA:3.40.50.300 1 110 1.2E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09825 a0be186582f402e16deb840171bf3430 320 Gene3D G3DSA:2.40.30.10 121 208 8.4E-17 T 21-04-2016 APL_RS09825 a0be186582f402e16deb840171bf3430 320 Gene3D G3DSA:2.40.30.10 212 318 1.9E-9 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081 302 598 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081 1 162 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081 213 271 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 113 589 1.2E-143 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 Pfam PF07549 SecD/SecF GG Motif 105 129 7.1E-5 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 582 1.2E-79 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PRINTS PR00702 Acriflavin resistance protein family signature 566 589 1.7E-6 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PRINTS PR00702 Acriflavin resistance protein family signature 491 515 1.7E-6 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 1.9E-26 T 21-04-2016 IPR027398 SecD export protein N-terminal TM domain APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 Gene3D G3DSA:1.20.1640.10 431 600 5.8E-29 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 Pfam PF02355 Protein export membrane protein 424 583 6.2E-16 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 SUPERFAMILY SSF82866 399 594 2.22E-43 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081:SF1 302 598 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081:SF1 1 162 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 PANTHER PTHR30081:SF1 213 271 1.1E-198 T 21-04-2016 APL_RS05570 4da0a489cb3d6184f4e5b0d9f9cb2fda 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 603 45.07 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946:SF5 1 576 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946:SF5 614 863 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946:SF5 883 950 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF46589 887 951 9.42E-18 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF50677 196 371 8.24E-60 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF52374 370 577 5.63E-137 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF52374 6 198 5.63E-137 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF52374 615 647 5.63E-137 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Pfam PF08264 Anticodon-binding domain of tRNA 677 825 6.6E-44 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 SUPERFAMILY SSF47323 648 902 3.92E-70 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 934 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:3.90.740.10 200 366 6.3E-49 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:1.10.730.10 637 819 1.0E-63 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 949 9.1E-17 T 21-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 952 16.144 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 6.3E-37 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 6.3E-37 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 6.3E-37 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PRINTS PR00986 Valyl-tRNA synthetase signature 375 388 6.3E-37 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 6.3E-37 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:1.10.287.380 884 945 3.4E-5 T 21-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946 1 576 0.0 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946 614 863 0.0 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 PANTHER PTHR11946 883 950 0.0 T 21-04-2016 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 637 1.1E-229 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:3.40.50.620 370 577 2.2E-138 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:3.40.50.620 10 199 2.2E-138 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS07920 586b7d7e58b8c559b4dde4b0b0c96b4c 954 Gene3D G3DSA:3.40.50.620 615 636 2.2E-138 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS04430 26ba0513d4ed6c70c20e314cf3ca4bfe 156 Gene3D G3DSA:3.40.30.10 2 154 6.7E-48 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS04430 26ba0513d4ed6c70c20e314cf3ca4bfe 156 PANTHER PTHR10681 1 136 8.7E-47 T 21-04-2016 APL_RS04430 26ba0513d4ed6c70c20e314cf3ca4bfe 156 Pfam PF00578 AhpC/TSA family 7 134 4.1E-35 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS04430 26ba0513d4ed6c70c20e314cf3ca4bfe 156 SUPERFAMILY SSF52833 1 149 1.09E-45 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SUPERFAMILY SSF52113 606 679 1.12E-19 T 21-04-2016 IPR001357 BRCT domain APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Hamap MF_01588 DNA ligase [ligA]. 17 680 53.968 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SUPERFAMILY SSF56091 17 329 5.28E-119 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 PIRSF PIRSF001604 6 683 9.6E-255 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 344 359 - T 21-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:3.30.470.30 131 265 8.4E-50 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF14520 Helix-hairpin-helix domain 459 508 2.8E-6 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 PANTHER PTHR23389:SF9 6 545 2.0E-205 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00278 525 544 43.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00278 459 478 1.2 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00278 557 576 6.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00278 493 512 2.5 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:1.10.150.20 517 597 8.5E-33 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 22 676 4.4E-274 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:1.10.150.20 448 516 1.5E-29 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 335 411 1.6E-35 T 21-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 127 156 - T 21-04-2016 IPR018239 NAD-dependent DNA ligase, active site APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 PANTHER PTHR23389 6 545 2.0E-205 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SUPERFAMILY SSF47781 417 597 3.71E-65 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00532 14 461 1.9E-276 T 21-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 607 678 1.6E-16 T 21-04-2016 IPR001357 BRCT domain APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SMART SM00292 606 683 2.6E-15 T 21-04-2016 IPR001357 BRCT domain APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 SUPERFAMILY SSF50249 331 413 4.45E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:1.10.287.610 7 78 3.8E-27 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 421 447 3.0E-9 T 21-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:2.40.50.140 332 404 3.1E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF12826 Helix-hairpin-helix motif 523 586 7.2E-23 T 21-04-2016 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 17 330 8.8E-135 T 21-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APL_RS06830 7c4a89e6111fac6dd52bb0717aa1cc82 683 Gene3D G3DSA:3.40.50.10190 606 680 5.7E-26 T 21-04-2016 IPR001357 BRCT domain APL_RS04310 f84e7cf3138044fcf50c1bbe099a50ef 293 Pfam PF01040 UbiA prenyltransferase family 33 274 6.2E-65 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APL_RS04310 f84e7cf3138044fcf50c1bbe099a50ef 293 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 21-04-2016 IPR030470 UbiA prenyltransferase conserved site APL_RS04310 f84e7cf3138044fcf50c1bbe099a50ef 293 PANTHER PTHR11048 13 289 1.1E-78 T 21-04-2016 APL_RS04310 f84e7cf3138044fcf50c1bbe099a50ef 293 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 14 290 3.2E-104 T 21-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 APL_RS04310 f84e7cf3138044fcf50c1bbe099a50ef 293 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 9 292 28.705 T 21-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 APL_RS08525 09d58a04e94f07b2a121c8bc2d5f994b 164 Pfam PF01814 Hemerythrin HHE cation binding domain 24 158 2.8E-25 T 21-04-2016 IPR012312 Haemerythrin-like APL_RS08525 09d58a04e94f07b2a121c8bc2d5f994b 164 PANTHER PTHR36438:SF1 6 164 8.7E-61 T 21-04-2016 APL_RS08525 09d58a04e94f07b2a121c8bc2d5f994b 164 PANTHER PTHR36438 6 164 8.7E-61 T 21-04-2016 APL_RS08525 09d58a04e94f07b2a121c8bc2d5f994b 164 Gene3D G3DSA:1.20.120.520 22 159 1.1E-25 T 21-04-2016 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:1.10.3500.10 458 505 2.7E-104 T 21-04-2016 IPR023323 Tex-like domain APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:1.10.3500.10 113 325 2.7E-104 T 21-04-2016 IPR023323 Tex-like domain APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:1.10.150.310 506 637 2.6E-46 T 21-04-2016 IPR023097 Tex RuvX-like domain APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Pfam PF16921 Tex protein YqgF-like domain 329 458 1.2E-49 T 21-04-2016 IPR032639 Tex protein, YqgF-like domain APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 PANTHER PTHR10724:SF1 1 754 0.0 T 21-04-2016 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SUPERFAMILY SSF50249 644 730 1.49E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SUPERFAMILY SSF158832 5 324 1.7E-120 T 21-04-2016 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:1.10.10.650 3 112 1.4E-46 T 21-04-2016 IPR023319 Tex-like protein, HTH domain APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SUPERFAMILY SSF47781 477 563 1.67E-27 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Pfam PF00575 S1 RNA binding domain 655 727 1.5E-23 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 PANTHER PTHR10724 1 754 0.0 T 21-04-2016 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SMART SM00316 656 727 1.4E-27 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:3.30.420.140 329 457 5.6E-48 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SMART SM00732 329 431 1.1E-31 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SUPERFAMILY SSF53098 325 476 1.21E-45 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 SUPERFAMILY SSF47781 567 639 2.89E-19 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Pfam PF12836 Helix-hairpin-helix motif 498 562 1.1E-27 T 21-04-2016 APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Gene3D G3DSA:2.40.50.140 649 727 1.1E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06635 ac9f04a9dfdce066e6b3939612e0bbdc 779 Pfam PF09371 Tex-like protein N-terminal domain 12 196 3.2E-69 T 21-04-2016 IPR018974 Tex-like protein, N-terminal APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 195 7.0E-54 T 21-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 PANTHER PTHR35869 1 209 2.0E-49 T 21-04-2016 APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 12 205 31.632 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 SUPERFAMILY SSF89392 28 206 3.92E-54 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 Gene3D G3DSA:2.50.20.10 28 206 4.1E-54 T 21-04-2016 APL_RS02440 d647f444fcad0d45b6acd295ce314f41 213 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 8 206 7.9E-81 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 Pfam PF00691 OmpA family 144 230 1.5E-20 T 21-04-2016 IPR006665 OmpA-like domain APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 PANTHER PTHR30128:SF16 137 253 5.3E-24 T 21-04-2016 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 PANTHER PTHR30128 137 253 5.3E-24 T 21-04-2016 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 PRINTS PR01021 OMPA domain signature 190 206 2.9E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 PRINTS PR01021 OMPA domain signature 175 190 2.9E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 PRINTS PR01021 OMPA domain signature 145 167 2.9E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 Pfam PF04355 SmpA / OmlA family 55 123 4.5E-17 T 21-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 Gene3D G3DSA:3.30.1330.60 135 250 3.1E-33 T 21-04-2016 IPR006665 OmpA-like domain APL_RS02365 eaa6010fc0414dbbc21940071200c47f 283 SUPERFAMILY SSF103088 136 250 4.97E-28 T 21-04-2016 IPR006665 OmpA-like domain APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 SUPERFAMILY SSF56935 14 174 2.62E-16 T 21-04-2016 APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 157 174 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 PANTHER PTHR32552 2 174 2.4E-27 T 21-04-2016 APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 PANTHER PTHR32552:SF18 2 174 2.4E-27 T 21-04-2016 APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 Gene3D G3DSA:2.40.170.20 13 174 1.8E-27 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10875 e50a0f949e21ba9c08554fd4818db634 174 Pfam PF00593 TonB dependent receptor 14 172 2.7E-11 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SMART SM00471 41 153 2.9E-11 T 21-04-2016 IPR003607 HD/PDEase domain APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 PANTHER PTHR21262 3 504 1.9E-278 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 PANTHER PTHR21262:SF0 3 504 1.9E-278 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 486 3.1E-213 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Pfam PF02824 TGS domain 388 447 4.7E-20 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SUPERFAMILY SSF81301 181 392 8.17E-59 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Gene3D G3DSA:3.10.20.30 388 448 6.9E-20 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Pfam PF13328 HD domain 26 175 5.2E-54 T 21-04-2016 IPR003607 HD/PDEase domain APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Gene3D G3DSA:3.30.460.10 178 324 1.4E-45 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Pfam PF13291 ACT domain 494 566 3.1E-14 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SMART SM00954 235 345 1.7E-56 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 4.5E-33 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 Gene3D G3DSA:3.30.70.260 495 565 3.7E-12 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SUPERFAMILY SSF109604 6 190 1.1E-76 T 21-04-2016 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SUPERFAMILY SSF81271 375 447 1.61E-20 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APL_RS09700 d1af526ccb25c58a181323be71a7be0c 568 SUPERFAMILY SSF55021 493 565 7.05E-9 T 21-04-2016 APL_RS00870 b25c642e2b46af8be54463ae1579603e 348 PANTHER PTHR30578 1 345 7.1E-129 T 21-04-2016 APL_RS00870 b25c642e2b46af8be54463ae1579603e 348 Pfam PF03116 NQR2, RnfD, RnfE family 5 345 2.4E-96 T 21-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APL_RS00870 b25c642e2b46af8be54463ae1579603e 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 2 347 26.959 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APL_RS00870 b25c642e2b46af8be54463ae1579603e 348 PANTHER PTHR30578:SF0 1 345 7.1E-129 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APL_RS00870 b25c642e2b46af8be54463ae1579603e 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 345 2.9E-127 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 171 23.136 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 Gene3D G3DSA:1.20.1280.20 84 172 4.1E-27 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 163 1.9E-18 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 SUPERFAMILY SSF47144 84 172 1.29E-24 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 Gene3D G3DSA:1.10.287.110 3 70 5.3E-22 T 21-04-2016 IPR001623 DnaJ domain APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 SMART SM00271 2 67 4.3E-5 T 21-04-2016 IPR001623 DnaJ domain APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 170 5.3E-46 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 PANTHER PTHR14021:SF15 3 173 4.4E-47 T 21-04-2016 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 PANTHER PTHR14021 3 173 4.4E-47 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APL_RS04850 0caed7a4a284a0da0c27e3bc035ea818 173 SUPERFAMILY SSF46565 3 70 1.57E-13 T 21-04-2016 IPR001623 DnaJ domain APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 Gene3D G3DSA:2.70.70.10 278 410 7.2E-41 T 21-04-2016 APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 PANTHER PTHR21666 292 410 1.2E-47 T 21-04-2016 APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 PANTHER PTHR21666:SF222 292 410 1.2E-47 T 21-04-2016 APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 Gene3D G3DSA:3.10.350.10 137 180 7.3E-13 T 21-04-2016 IPR018392 LysM domain APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 Pfam PF01551 Peptidase family M23 312 405 7.5E-31 T 21-04-2016 IPR016047 Peptidase M23 APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 Pfam PF01476 LysM domain 139 180 8.2E-9 T 21-04-2016 IPR018392 LysM domain APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 SUPERFAMILY SSF51261 138 409 1.1E-51 T 21-04-2016 IPR011055 Duplicated hybrid motif APL_RS10250 61ca212dba855b0946d64b6632d3721c 412 SMART SM00257 138 182 8.6E-11 T 21-04-2016 IPR018392 LysM domain APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 SUPERFAMILY SSF56712 2 604 8.89E-183 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Gene3D G3DSA:3.40.50.140 3 153 1.7E-43 T 21-04-2016 IPR006171 Toprim domain APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Pfam PF01131 DNA topoisomerase 158 594 2.5E-116 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 617 2.1E-252 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PANTHER PTHR11390 2 504 1.1E-180 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PANTHER PTHR11390 522 594 1.1E-180 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.3E-25 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 2.3E-25 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 2.3E-25 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 2.3E-25 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 2.3E-25 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PANTHER PTHR11390:SF21 2 504 1.1E-180 T 21-04-2016 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 PANTHER PTHR11390:SF21 522 594 1.1E-180 T 21-04-2016 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 638 63.686 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 SMART SM00437 281 559 1.1E-102 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Pfam PF01751 Toprim domain 3 135 1.4E-14 T 21-04-2016 IPR006171 Toprim domain APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 SMART SM00436 128 223 2.1E-35 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 SMART SM00493 1 124 1.3E-25 T 21-04-2016 IPR006171 Toprim domain APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Gene3D G3DSA:2.70.20.10 218 253 3.8E-47 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Gene3D G3DSA:2.70.20.10 371 482 3.8E-47 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Gene3D G3DSA:1.10.460.10 158 217 4.4E-55 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APL_RS03875 d1347066462b20f7f794c69b14e0eba5 638 Gene3D G3DSA:1.10.460.10 483 605 4.4E-55 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PANTHER PTHR11451:SF31 1 637 0.0 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.30.980.10 66 129 7.5E-42 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.30.980.10 188 224 7.5E-42 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Pfam PF03129 Anticodon binding domain 541 630 3.4E-22 T 21-04-2016 IPR004154 Anticodon-binding APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.8E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.8E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.8E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.8E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.8E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.40.50.800 532 638 5.5E-37 T 21-04-2016 IPR004154 Anticodon-binding APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 SUPERFAMILY SSF55186 63 241 6.41E-65 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 SUPERFAMILY SSF52954 529 634 1.81E-32 T 21-04-2016 IPR004154 Anticodon-binding APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 SUPERFAMILY SSF55681 243 525 1.87E-95 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 6.3E-247 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.10.20.30 1 64 5.9E-21 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 SUPERFAMILY SSF81271 3 61 8.83E-15 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 5.2E-14 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.02 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.30.54.20 131 187 1.1E-20 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.2E-49 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 PANTHER PTHR11451 1 637 0.0 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 SMART SM00863 170 219 2.3E-19 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Gene3D G3DSA:3.30.930.10 242 530 3.6E-120 T 21-04-2016 APL_RS01120 67e2cb0d69d725a670b645ffa3d0ea0c 643 Pfam PF02824 TGS domain 4 61 3.6E-10 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 PANTHER PTHR12029 6 184 9.4E-40 T 21-04-2016 APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 4 240 2.2E-85 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 SUPERFAMILY SSF75217 6 166 5.62E-35 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 PIRSF PIRSF004808 2 243 5.4E-75 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 Gene3D G3DSA:3.40.1280.10 5 160 1.8E-31 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS04415 6f97b8fd1b7d07c2987e01fd953271fb 243 Pfam PF00588 SpoU rRNA Methylase family 7 156 2.0E-33 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 Pfam PF00149 Calcineurin-like phosphoesterase 29 250 1.9E-17 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 SUPERFAMILY SSF55816 359 539 1.7E-50 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 481 500 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 412 435 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 278 298 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 202 219 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 27 45 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PRINTS PR01607 Apyrase family signature 233 256 1.5E-47 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 ProSitePatterns PS00786 5'-nucleotidase signature 2. 104 115 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 Gene3D G3DSA:3.60.21.10 23 355 9.6E-93 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PANTHER PTHR11575 7 543 6.2E-183 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 Gene3D G3DSA:3.90.780.10 359 536 7.1E-54 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 Pfam PF02872 5'-nucleotidase, C-terminal domain 359 507 3.6E-36 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 SUPERFAMILY SSF56300 22 355 3.34E-91 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS04005 65947f9e15f3ec96c916a7e462b53906 547 PANTHER PTHR11575:SF27 7 543 6.2E-183 T 21-04-2016 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 Gene3D G3DSA:3.40.50.300 335 586 3.4E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 273 9.7E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 SUPERFAMILY SSF161098 77 269 3.14E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 SMART SM00382 368 561 2.6E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 Pfam PF00005 ABC transporter 359 511 1.3E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 561 621 1.4E-10 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 Gene3D G3DSA:1.10.3720.10 74 277 2.5E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 563 619 1.1E-6 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 PANTHER PTHR24220 341 657 2.8E-116 T 21-04-2016 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 PANTHER PTHR24220:SF535 341 657 2.8E-116 T 21-04-2016 APL_RS04450 f6b77402e28350e4d4ec12d2a419b902 657 SUPERFAMILY SSF52540 339 582 9.43E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08820 4131ed094dffe7b3925a18376ecd95dc 275 PANTHER PTHR32502:SF9 1 275 4.5E-146 T 21-04-2016 APL_RS08820 4131ed094dffe7b3925a18376ecd95dc 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 274 1.6E-108 T 21-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APL_RS08820 4131ed094dffe7b3925a18376ecd95dc 275 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 274 3.8E-124 T 21-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APL_RS08820 4131ed094dffe7b3925a18376ecd95dc 275 PANTHER PTHR32502 1 275 4.5E-146 T 21-04-2016 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 21-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PIRSF PIRSF001415 2 336 2.5E-146 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 SMART SM01004 9 333 5.3E-239 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 4.2E-137 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 3.3E-56 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 Gene3D G3DSA:3.20.20.70 6 336 7.0E-149 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 PANTHER PTHR11458 9 339 8.0E-184 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS10540 26c7c0a08622333dad160ab5eafb371e 339 SUPERFAMILY SSF51569 5 335 1.9E-141 T 21-04-2016 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 PANTHER PTHR10916:SF0 1 63 2.2E-28 T 21-04-2016 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.253 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 21-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-23 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 PANTHER PTHR10916 1 63 2.2E-28 T 21-04-2016 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 SUPERFAMILY SSF46561 1 61 3.92E-22 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 Gene3D G3DSA:1.10.287.310 1 60 1.9E-27 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09400 20621f08e25d79f4af2ce55585270312 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.2E-23 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 SUPERFAMILY SSF52317 4 195 3.44E-53 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 195 33.113 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PIRSF PIRSF000495 1 196 7.0E-64 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 Gene3D G3DSA:3.40.50.880 2 195 8.4E-67 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PRINTS PR00097 Anthranilate synthase component II signature 72 83 1.9E-5 T 21-04-2016 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PRINTS PR00097 Anthranilate synthase component II signature 97 105 1.9E-5 T 21-04-2016 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PRINTS PR00097 Anthranilate synthase component II signature 173 186 1.9E-5 T 21-04-2016 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PANTHER PTHR21235:SF1 2 196 4.2E-79 T 21-04-2016 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 194 7.5E-66 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 Pfam PF00117 Glutamine amidotransferase class-I 35 193 1.4E-21 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APL_RS10730 78a696a27ec3c2b232b69c2cf6929db6 196 PANTHER PTHR21235 2 196 4.2E-79 T 21-04-2016 APL_RS02500 31a56a243469f9a851708279a154c629 422 Gene3D G3DSA:3.40.50.10380 7 159 1.1E-50 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APL_RS02500 31a56a243469f9a851708279a154c629 422 SMART SM00919 162 398 7.1E-143 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APL_RS02500 31a56a243469f9a851708279a154c629 422 SMART SM01274 17 150 2.8E-79 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APL_RS02500 31a56a243469f9a851708279a154c629 422 Gene3D G3DSA:3.40.50.720 160 417 4.6E-86 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02500 31a56a243469f9a851708279a154c629 422 PIRSF PIRSF000106 37 421 2.7E-67 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APL_RS02500 31a56a243469f9a851708279a154c629 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 356 2.2E-20 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APL_RS02500 31a56a243469f9a851708279a154c629 422 SUPERFAMILY SSF53223 9 160 6.12E-53 T 21-04-2016 APL_RS02500 31a56a243469f9a851708279a154c629 422 PANTHER PTHR23406 33 420 3.9E-166 T 21-04-2016 APL_RS02500 31a56a243469f9a851708279a154c629 422 SUPERFAMILY SSF51735 162 417 1.4E-84 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02500 31a56a243469f9a851708279a154c629 422 Pfam PF00390 Malic enzyme, N-terminal domain 18 150 5.8E-28 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APL_RS07170 a59960f4d396761b189ede45e8145842 123 PANTHER PTHR34039 5 120 2.8E-34 T 21-04-2016 APL_RS07170 a59960f4d396761b189ede45e8145842 123 Pfam PF02021 Uncharacterised protein family UPF0102 17 108 1.0E-24 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 APL_RS07170 a59960f4d396761b189ede45e8145842 123 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 9 122 2.0E-42 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 APL_RS07170 a59960f4d396761b189ede45e8145842 123 Gene3D G3DSA:3.40.1350.10 17 121 2.3E-31 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APL_RS07170 a59960f4d396761b189ede45e8145842 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 9 122 21.767 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 APL_RS07170 a59960f4d396761b189ede45e8145842 123 SUPERFAMILY SSF52980 10 122 8.71E-21 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS07170 a59960f4d396761b189ede45e8145842 123 PANTHER PTHR34039:SF1 5 120 2.8E-34 T 21-04-2016 APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PANTHER PTHR30012:SF0 6 398 2.6E-89 T 21-04-2016 APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 397 2.9E-13 T 21-04-2016 IPR003004 GspF/PilC family APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 362 376 2.9E-13 T 21-04-2016 IPR003004 GspF/PilC family APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 2.9E-13 T 21-04-2016 IPR003004 GspF/PilC family APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 2.9E-13 T 21-04-2016 IPR003004 GspF/PilC family APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 PANTHER PTHR30012 6 398 2.6E-89 T 21-04-2016 APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 Pfam PF00482 Type II secretion system (T2SS), protein F 267 389 4.9E-26 T 21-04-2016 IPR018076 Type II secretion system F domain APL_RS04585 01a7ffad85e1fb6abc856f2d5b69a7e4 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 2.1E-23 T 21-04-2016 IPR018076 Type II secretion system F domain APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 804 31.385 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 SUPERFAMILY SSF69593 288 479 3.01E-24 T 21-04-2016 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PIRSF PIRSF500064 2 812 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PANTHER PTHR12563:SF14 141 811 0.0 T 21-04-2016 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PANTHER PTHR12563:SF14 1 117 0.0 T 21-04-2016 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 Pfam PF01553 Acyltransferase 279 421 1.4E-24 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 12 796 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PIRSF PIRSF000437 19 810 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PANTHER PTHR12563 141 811 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 PANTHER PTHR12563 1 117 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APL_RS05775 b58b61d09937271d34c34d7d030ed1cd 824 SMART SM00563 297 424 3.5E-30 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.9E-72 T 21-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.935 T 21-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 Gene3D G3DSA:3.30.70.640 3 157 1.0E-69 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 PANTHER PTHR22960 1 158 7.2E-110 T 21-04-2016 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 SUPERFAMILY SSF55040 11 155 1.27E-61 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APL_RS03605 511ba8ee372bba05bb7b65365fc9e463 158 Pfam PF01967 MoaC family 15 150 7.9E-56 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 Pfam PF08206 Ribonuclease B OB domain 24 70 1.6E-15 T 21-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 PANTHER PTHR23355:SF37 15 655 7.7E-304 T 21-04-2016 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SMART SM00316 574 658 0.013 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SMART SM00316 17 77 19.0 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 Pfam PF00575 S1 RNA binding domain 579 657 1.0E-9 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SUPERFAMILY SSF50249 8 79 4.25E-12 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SMART SM00357 23 78 3.3E-9 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 658 5.4E-214 T 21-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SUPERFAMILY SSF50249 188 570 1.47E-103 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SUPERFAMILY SSF50249 82 171 1.03E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 Gene3D G3DSA:2.40.50.140 579 654 6.9E-4 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SUPERFAMILY SSF50249 578 657 7.04E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 657 4.3E-296 T 21-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 SMART SM00955 189 532 8.5E-117 T 21-04-2016 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 Pfam PF00773 RNB domain 189 530 8.9E-89 T 21-04-2016 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 PANTHER PTHR23355 15 655 7.7E-304 T 21-04-2016 APL_RS03940 46e0666abf36e63a9d9c36e9bf36dc84 658 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 658 41.653 T 21-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 Pfam PF00448 SRP54-type protein, GTPase domain 374 573 1.6E-78 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 Pfam PF02881 SRP54-type protein, helical bundle domain 289 354 1.6E-11 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 PANTHER PTHR11564:SF16 268 577 1.5E-146 T 21-04-2016 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 SMART SM00962 373 574 2.5E-125 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 Gene3D G3DSA:3.40.50.300 370 574 6.4E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 SMART SM00963 278 358 1.4E-20 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 SUPERFAMILY SSF47364 273 351 1.44E-20 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 547 560 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 301 573 2.2E-115 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 SUPERFAMILY SSF52540 370 574 2.09E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 Gene3D G3DSA:1.20.120.140 263 353 6.6E-31 T 21-04-2016 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 301 574 63.317 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 PANTHER PTHR11564 268 577 1.5E-146 T 21-04-2016 APL_RS07085 40e3f78b19a3e8f96c1812290e0900fa 577 SMART SM00382 372 564 1.4E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04940 cf7ab83536fb4b6bc7e4c6c96d258cc4 89 SUPERFAMILY SSF55729 4 86 1.92E-17 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS04940 cf7ab83536fb4b6bc7e4c6c96d258cc4 89 Pfam PF14542 GCN5-related N-acetyl-transferase 11 84 3.7E-19 T 21-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APL_RS04940 cf7ab83536fb4b6bc7e4c6c96d258cc4 89 Gene3D G3DSA:3.40.630.30 8 88 7.9E-22 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS04940 cf7ab83536fb4b6bc7e4c6c96d258cc4 89 PANTHER PTHR31435 1 77 5.2E-15 T 21-04-2016 APL_RS02060 ad30f6d11ba74244597a265c9aa8727b 179 PANTHER PTHR11608 1 177 6.3E-84 T 21-04-2016 APL_RS02060 ad30f6d11ba74244597a265c9aa8727b 179 Gene3D G3DSA:3.40.50.2020 1 166 3.4E-47 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02060 ad30f6d11ba74244597a265c9aa8727b 179 SUPERFAMILY SSF53271 2 171 9.83E-42 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02060 ad30f6d11ba74244597a265c9aa8727b 179 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 2 175 34.616 T 21-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 APL_RS02060 ad30f6d11ba74244597a265c9aa8727b 179 Pfam PF00156 Phosphoribosyl transferase domain 9 158 2.2E-20 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 79.222 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Pfam PF00889 Elongation factor TS 71 262 3.1E-65 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Gene3D G3DSA:3.30.479.20 166 181 5.0E-28 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Gene3D G3DSA:3.30.479.20 227 265 5.0E-28 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Gene3D G3DSA:3.30.479.20 57 93 5.0E-28 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Gene3D G3DSA:1.10.286.20 182 226 2.2E-21 T 21-04-2016 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 SUPERFAMILY SSF54713 142 280 1.57E-49 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 SUPERFAMILY SSF54713 56 138 6.32E-21 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 Gene3D G3DSA:1.10.8.10 2 55 1.9E-28 T 21-04-2016 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 SUPERFAMILY SSF46934 3 56 4.98E-19 T 21-04-2016 IPR009060 UBA-like GO:0005515 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 PANTHER PTHR11741 1 282 1.5E-139 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 3.2E-117 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APL_RS02980 2aca6b5f201b6756627058883e7462d3 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 PANTHER PTHR30404:SF1 23 275 9.5E-129 T 21-04-2016 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 27 247 3.9E-49 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 SUPERFAMILY SSF53187 25 123 7.22E-51 T 21-04-2016 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 SUPERFAMILY SSF53187 174 249 7.22E-51 T 21-04-2016 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 SUPERFAMILY SSF54106 338 380 1.44E-9 T 21-04-2016 IPR018392 LysM domain APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 Gene3D G3DSA:3.40.630.40 175 249 6.4E-58 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 Gene3D G3DSA:3.40.630.40 25 124 6.4E-58 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 Gene3D G3DSA:3.10.350.10 337 380 5.7E-13 T 21-04-2016 IPR018392 LysM domain APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 SMART SM00646 88 247 1.4E-65 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 SMART SM00257 338 381 6.1E-12 T 21-04-2016 IPR018392 LysM domain APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 Pfam PF01476 LysM domain 339 380 8.7E-11 T 21-04-2016 IPR018392 LysM domain APL_RS05920 eeb42559cccd9f2339db46acc9c33781 381 PANTHER PTHR30404 23 275 9.5E-129 T 21-04-2016 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 PANTHER PTHR11807:SF2 18 417 2.2E-78 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 Pfam PF09179 TilS substrate binding domain 241 308 1.3E-19 T 21-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 SUPERFAMILY SSF56037 316 418 2.88E-18 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 SUPERFAMILY SSF82829 227 311 3.79E-23 T 21-04-2016 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 300 24.31 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 PANTHER PTHR11807 18 417 2.2E-78 T 21-04-2016 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 SUPERFAMILY SSF52402 12 225 2.21E-63 T 21-04-2016 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 375 412 6.0E-7 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 Pfam PF11734 TilS substrate C-terminal domain 376 417 7.0E-9 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 195 4.7E-56 T 21-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 Pfam PF01171 PP-loop family 20 192 4.4E-58 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APL_RS08140 0e6e90c33311cfc100b1a3bc08716d26 419 Gene3D G3DSA:3.40.50.620 17 169 3.8E-17 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 291 2.3E-75 T 21-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PANTHER PTHR30477:SF12 1 290 2.9E-148 T 21-04-2016 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 SUPERFAMILY SSF53807 21 294 1.57E-88 T 21-04-2016 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 Gene3D G3DSA:3.40.50.1980 173 293 4.2E-40 T 21-04-2016 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 69 86 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 180 201 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 259 278 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 56 69 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 233 251 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00690 Adhesin family signature 25 43 2.1E-43 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 50 68 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 69 88 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 229 246 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 25 46 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 206 224 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 180 197 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PRINTS PR00691 Adhesin B signature 251 269 4.1E-37 T 21-04-2016 IPR006129 Adhesin B GO:0007155 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 Gene3D G3DSA:3.40.50.1980 21 172 1.1E-50 T 21-04-2016 APL_RS01410 dcf006d06453aeb0bc34206899914cfa 298 PANTHER PTHR30477 1 290 2.9E-148 T 21-04-2016 APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 2 63 2.7E-7 T 21-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 Gene3D G3DSA:1.10.443.10 181 336 8.4E-30 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 Pfam PF00589 Phage integrase family 181 336 5.1E-12 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 SUPERFAMILY SSF56349 71 335 3.83E-44 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 Gene3D G3DSA:1.10.150.130 73 156 7.9E-4 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal APL_RS02510 bb335ac28d0d44ab3ddc9c973b112856 346 Gene3D G3DSA:3.30.160.60 1 65 2.0E-13 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 SUPERFAMILY SSF47413 1 59 1.74E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Gene3D G3DSA:3.40.50.2300 173 308 1.0E-51 T 21-04-2016 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 PANTHER PTHR30146:SF38 1 335 6.1E-152 T 21-04-2016 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.9E-18 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 PANTHER PTHR30146 1 335 6.1E-152 T 21-04-2016 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 SUPERFAMILY SSF53822 60 333 6.71E-89 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 313 1.8E-39 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Gene3D G3DSA:3.40.50.2300 54 172 2.9E-44 T 21-04-2016 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 SMART SM00354 1 71 3.0E-35 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Gene3D G3DSA:1.10.260.40 2 53 1.5E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS04295 5fd2538e53069d73748fef76d31f2197 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 62.344 T 21-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Gene3D G3DSA:3.40.50.920 490 615 1.5E-29 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Gene3D G3DSA:3.40.50.970 22 198 3.7E-78 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Gene3D G3DSA:3.40.50.970 240 331 3.7E-78 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Pfam PF02780 Transketolase, C-terminal domain 491 607 1.3E-21 T 21-04-2016 IPR033248 Transketolase, C-terminal domain APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 614 1.1E-301 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 280 1.6E-120 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 SMART SM00861 316 480 1.3E-70 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 SUPERFAMILY SSF52922 488 616 4.57E-27 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 SUPERFAMILY SSF52518 314 500 4.77E-59 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Pfam PF02779 Transketolase, pyrimidine binding domain 317 477 2.4E-42 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 PANTHER PTHR11624:SF20 21 215 0.0 T 21-04-2016 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 PANTHER PTHR11624:SF20 239 617 0.0 T 21-04-2016 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Gene3D G3DSA:3.40.50.970 332 483 3.1E-38 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 616 45.425 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 SUPERFAMILY SSF52518 241 378 4.33E-79 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 SUPERFAMILY SSF52518 5 196 4.33E-79 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 PANTHER PTHR11624 21 215 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS01060 4178d75227b82780d5c11381e4f3cdd8 617 PANTHER PTHR11624 239 617 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 PANTHER PTHR33515 1 127 1.7E-48 T 21-04-2016 APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 SUPERFAMILY SSF89919 3 106 7.46E-34 T 21-04-2016 IPR023799 Ribosome-binding factor A domain APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 5.0E-44 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 21-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 22.432 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 Gene3D G3DSA:3.30.300.20 2 106 9.9E-40 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 Pfam PF02033 Ribosome-binding factor A 7 111 6.8E-32 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APL_RS03350 3c2a25a1b869a40bb247f4cafba3fcc0 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 2.2E-44 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 207 2.7E-26 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 PIRSF PIRSF005917 1 282 1.2E-105 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 SUPERFAMILY SSF53790 7 227 5.5E-84 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 Gene3D G3DSA:3.30.950.10 117 231 8.4E-45 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 229 37.518 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 9 279 1.8E-110 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 Gene3D G3DSA:3.40.1010.10 7 116 2.1E-16 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 PANTHER PTHR21091:SF18 1 229 3.0E-93 T 21-04-2016 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 PANTHER PTHR21091 1 229 3.0E-93 T 21-04-2016 APL_RS07160 720cc47e972df7fb54bd8cdb6605e05b 284 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 21-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 PANTHER PTHR36251:SF2 3 989 1.6E-239 T 21-04-2016 APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 PANTHER PTHR36251 3 989 1.6E-239 T 21-04-2016 APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 Gene3D G3DSA:2.60.40.10 715 780 4.2E-4 T 21-04-2016 IPR013783 Immunoglobulin-like fold APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 SUPERFAMILY SSF51126 1512 1711 2.72E-6 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 SUPERFAMILY SSF51126 1363 1381 2.72E-6 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 Gene3D G3DSA:2.60.40.10 626 692 1.5E-4 T 21-04-2016 IPR013783 Immunoglobulin-like fold APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 SUPERFAMILY SSF49265 621 693 9.59E-5 T 21-04-2016 IPR003961 Fibronectin type III GO:0005515 APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 Pfam PF09327 Domain of unknown function (DUF1983) 1490 1571 1.7E-24 T 21-04-2016 IPR015406 Domain of unknown function DUF1983 APL_RS02760 9174fb384ee134c708b54be0f3516597 1865 Pfam PF13550 Putative phage tail protein 334 498 7.0E-38 T 21-04-2016 IPR032876 Tip attachment protein J APL_RS03385 cf29987e7830b7fc31c20977a5732965 99 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 1 80 4.7E-10 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APL_RS03385 cf29987e7830b7fc31c20977a5732965 99 PANTHER PTHR11098 1 99 9.5E-16 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APL_RS03385 cf29987e7830b7fc31c20977a5732965 99 SUPERFAMILY SSF51690 2 97 5.89E-8 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APL_RS03385 cf29987e7830b7fc31c20977a5732965 99 PANTHER PTHR11098:SF2 1 99 9.5E-16 T 21-04-2016 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 SMART SM01103 3 86 4.7E-44 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.5E-22 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 Gene3D G3DSA:3.30.110.60 2 95 1.2E-34 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 PANTHER PTHR31846 2 98 3.6E-41 T 21-04-2016 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 9.6E-37 T 21-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 SUPERFAMILY SSF75471 2 95 1.31E-31 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APL_RS02145 ec15f3757ddb0557f5bddaa2ff186257 103 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 7.0E-39 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APL_RS06320 68b4d0cdfe10531af1e9f30ade3929df 675 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 502 9.5E-168 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APL_RS06320 68b4d0cdfe10531af1e9f30ade3929df 675 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 500 1.9E-174 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APL_RS06320 68b4d0cdfe10531af1e9f30ade3929df 675 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 21-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS06320 68b4d0cdfe10531af1e9f30ade3929df 675 PANTHER PTHR30047:SF2 8 670 1.4E-283 T 21-04-2016 APL_RS06320 68b4d0cdfe10531af1e9f30ade3929df 675 PANTHER PTHR30047 8 670 1.4E-283 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PANTHER PTHR22642 33 303 2.2E-256 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PANTHER PTHR22642 327 506 2.2E-256 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 56.413 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PANTHER PTHR22642:SF7 33 303 2.2E-256 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PANTHER PTHR22642:SF7 327 506 2.2E-256 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Pfam PF01979 Amidohydrolase family 132 458 1.7E-81 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 341 357 2.1E-34 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 302 319 2.1E-34 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 2.1E-34 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 2.1E-34 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 125 3.9E-52 T 21-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 SUPERFAMILY SSF51556 485 572 9.36E-196 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 SUPERFAMILY SSF51556 137 436 9.36E-196 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Gene3D G3DSA:3.20.20.140 493 570 8.8E-208 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Gene3D G3DSA:3.20.20.140 151 434 8.8E-208 T 21-04-2016 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 ProSitePatterns PS00145 Urease active site. 324 340 - T 21-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 SUPERFAMILY SSF51338 4 184 3.24E-55 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 ProSitePatterns PS01120 Urease nickel ligands signature. 134 147 - T 21-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 Gene3D G3DSA:2.30.40.10 71 150 1.9E-16 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 SUPERFAMILY SSF51338 430 482 3.02E-5 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS08575 e667f8f0153ac966a5f1e40c86560ba6 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 5 572 9.1E-290 T 21-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 21-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 SUPERFAMILY SSF52540 1 206 1.45E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 Pfam PF02223 Thymidylate kinase 8 196 5.9E-60 T 21-04-2016 APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 Gene3D G3DSA:3.40.50.300 2 205 5.1E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 28.222 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 1.2E-69 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APL_RS09645 b046cc74ec92cd53a173e849a5c13a2f 208 PANTHER PTHR10344 1 205 1.5E-76 T 21-04-2016 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 Gene3D G3DSA:3.40.640.10 48 317 4.5E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 3.8E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 3.8E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 3.8E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 3.8E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PANTHER PTHR11879 1 397 8.4E-250 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 Pfam PF00155 Aminotransferase class I and II 30 394 1.5E-85 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 PANTHER PTHR11879:SF11 1 397 8.4E-250 T 21-04-2016 APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 SUPERFAMILY SSF53383 1 398 3.06E-118 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03460 ec1198e304533497178c21f0b0d3847b 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 3.8E-14 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF03725 3' exoribonuclease family, domain 2 459 526 8.6E-6 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SMART SM00316 619 689 1.9E-25 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF55666 449 548 8.38E-28 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF00013 KH domain 556 607 1.1E-9 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Gene3D G3DSA:2.40.50.140 617 693 9.2E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF54211 3 143 1.21E-49 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF46915 238 319 3.4E-18 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF54211 297 467 1.06E-46 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SMART SM00322 551 616 3.4E-13 T 21-04-2016 IPR004087 K Homology domain GO:0003676 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF00575 S1 RNA binding domain 618 689 4.8E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.0E-18 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 4.9E-22 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF55666 144 234 9.42E-30 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.357 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 PANTHER PTHR11252 1 715 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 PANTHER PTHR11252:SF0 1 715 0.0 T 21-04-2016 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Gene3D G3DSA:1.10.10.400 238 311 8.0E-24 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF54791 551 628 1.8E-16 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 2.7E-22 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 SUPERFAMILY SSF50249 607 691 1.11E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Gene3D G3DSA:3.30.1370.10 551 616 9.5E-26 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 PIRSF PIRSF005499 1 715 2.2E-298 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Gene3D G3DSA:3.30.230.70 312 541 6.6E-88 T 21-04-2016 IPR027408 PNPase/RNase PH domain APL_RS03030 264cfa6b0a266d5675a5dbbe020caded 715 Gene3D G3DSA:3.30.230.70 2 224 3.6E-83 T 21-04-2016 IPR027408 PNPase/RNase PH domain APL_RS06585 6487df83f66086707b5fd916d17be5de 128 Pfam PF00376 MerR family regulatory protein 2 39 1.1E-12 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 PANTHER PTHR30204:SF16 1 127 8.8E-52 T 21-04-2016 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 Gene3D G3DSA:1.10.1660.10 1 55 1.6E-23 T 21-04-2016 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.9E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.9E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 PANTHER PTHR30204 1 127 8.8E-52 T 21-04-2016 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 Pfam PF09278 MerR, DNA binding 44 106 3.5E-19 T 21-04-2016 IPR015358 Transcription regulator MerR, DNA binding APL_RS06585 6487df83f66086707b5fd916d17be5de 128 SMART SM00422 1 70 4.1E-26 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 Gene3D G3DSA:1.10.1660.10 56 127 9.5E-29 T 21-04-2016 APL_RS06585 6487df83f66086707b5fd916d17be5de 128 SUPERFAMILY SSF46955 1 126 1.87E-35 T 21-04-2016 IPR009061 Putative DNA-binding domain APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 SUPERFAMILY SSF50249 25 80 4.28E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 SUPERFAMILY SSF53335 83 442 8.87E-79 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 Gene3D G3DSA:2.40.50.140 12 94 2.8E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 PANTHER PTHR11061 26 442 1.6E-110 T 21-04-2016 APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 Pfam PF01938 TRAM domain 26 74 6.5E-9 T 21-04-2016 IPR002792 TRAM domain APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 PANTHER PTHR11061:SF30 26 442 1.6E-110 T 21-04-2016 APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 Gene3D G3DSA:3.40.50.150 251 441 6.5E-54 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 107 440 3.1E-24 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 425 435 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 25 442 60.971 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APL_RS01615 aaf7e912b2a16592a5d781aab97ac4c6 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 31 435 4.3E-133 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 4 231 46.722 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 SUPERFAMILY SSF53167 4 229 1.7E-73 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 4 229 1.3E-97 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 Pfam PF01048 Phosphorylase superfamily 4 228 8.9E-50 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 PANTHER PTHR21234 4 229 2.0E-55 T 21-04-2016 IPR018017 Nucleoside phosphorylase APL_RS08680 f605c1bc275caf8717d980a0b5cdd958 232 Gene3D G3DSA:3.40.50.1580 4 230 3.9E-77 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS02310 4a709b3c3cd14410d4198ea906feec56 505 Pfam PF03553 Na+/H+ antiporter family 164 476 1.9E-90 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APL_RS02310 4a709b3c3cd14410d4198ea906feec56 505 PANTHER PTHR33451:SF7 1 501 4.0E-185 T 21-04-2016 APL_RS02310 4a709b3c3cd14410d4198ea906feec56 505 PANTHER PTHR33451 1 501 4.0E-185 T 21-04-2016 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 SUPERFAMILY SSF63737 2 193 2.62E-45 T 21-04-2016 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 3.7E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 3.7E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 3.7E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 3.7E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 3.7E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 Pfam PF01433 Peptidase family M1 16 384 1.7E-79 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 Gene3D G3DSA:1.25.50.10 547 869 1.4E-114 T 21-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PANTHER PTHR11533 610 869 0.0 T 21-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PANTHER PTHR11533 8 587 0.0 T 21-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 SUPERFAMILY SSF55486 204 450 1.03E-76 T 21-04-2016 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PANTHER PTHR11533:SF152 610 869 0.0 T 21-04-2016 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 PANTHER PTHR11533:SF152 8 587 0.0 T 21-04-2016 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 Pfam PF11940 Domain of unknown function (DUF3458) 460 826 2.0E-128 T 21-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 868 0.0 T 21-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 APL_RS07055 86b4fbc78a811d165beab03efa9070a2 869 Gene3D G3DSA:1.10.390.10 308 451 1.7E-32 T 21-04-2016 APL_RS07310 a9f5eb388254cf895c854c7c20573196 113 PANTHER PTHR38778 2 113 3.4E-47 T 21-04-2016 APL_RS07310 a9f5eb388254cf895c854c7c20573196 113 Pfam PF04320 Protein with unknown function (DUF469) 8 107 3.5E-38 T 21-04-2016 IPR007416 Protein of unknown function DUF469 APL_RS07310 a9f5eb388254cf895c854c7c20573196 113 PANTHER PTHR38778:SF1 2 113 3.4E-47 T 21-04-2016 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 Gene3D G3DSA:3.40.50.720 2 203 2.3E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 367 5.2E-58 T 21-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PANTHER PTHR30524:SF0 1 379 5.6E-182 T 21-04-2016 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 SUPERFAMILY SSF48179 205 373 7.48E-41 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PANTHER PTHR30524 1 379 5.6E-182 T 21-04-2016 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 1.3E-17 T 21-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 1.3E-17 T 21-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 1.3E-17 T 21-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-17 T 21-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 21-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 379 40.993 T 21-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 SUPERFAMILY SSF51735 1 204 1.36E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 Gene3D G3DSA:1.10.1040.10 204 373 5.8E-41 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS08640 627b1e64eac2701679561cd3f1e39fbe 379 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 124 1.8E-24 T 21-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 SUPERFAMILY SSF54211 302 496 2.66E-33 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 Pfam PF13654 AAA domain 72 258 8.6E-13 T 21-04-2016 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 390 496 6.4E-8 T 21-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 PANTHER PTHR10046:SF49 58 501 1.7E-100 T 21-04-2016 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 Gene3D G3DSA:3.30.230.10 296 496 4.8E-32 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 304 320 7.3E-7 T 21-04-2016 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 417 436 7.3E-7 T 21-04-2016 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 387 406 7.3E-7 T 21-04-2016 APL_RS10045 034b449dbc14e0356d532a1f3d56b106 545 PANTHER PTHR10046 58 501 1.7E-100 T 21-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APL_RS07405 acb2a025033e89286cabffd1598f6434 156 SUPERFAMILY SSF47973 5 149 4.06E-61 T 21-04-2016 IPR023798 Ribosomal protein S7 domain APL_RS07405 acb2a025033e89286cabffd1598f6434 156 PANTHER PTHR11205 1 156 6.3E-96 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APL_RS07405 acb2a025033e89286cabffd1598f6434 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.989 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APL_RS07405 acb2a025033e89286cabffd1598f6434 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 21-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APL_RS07405 acb2a025033e89286cabffd1598f6434 156 Gene3D G3DSA:1.10.455.10 8 156 9.2E-68 T 21-04-2016 IPR023798 Ribosomal protein S7 domain APL_RS07405 acb2a025033e89286cabffd1598f6434 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.0E-66 T 21-04-2016 IPR023798 Ribosomal protein S7 domain APL_RS07405 acb2a025033e89286cabffd1598f6434 156 PIRSF PIRSF002122 2 156 1.6E-63 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APL_RS07405 acb2a025033e89286cabffd1598f6434 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.9E-72 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 Pfam PF01595 Domain of unknown function DUF21 8 199 1.2E-39 T 21-04-2016 IPR002550 Domain of unknown function DUF21 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 PANTHER PTHR22777:SF16 1 424 1.6E-247 T 21-04-2016 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 Pfam PF00571 CBS domain 287 334 9.2E-4 T 21-04-2016 IPR000644 CBS domain APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 PANTHER PTHR22777 1 424 1.6E-247 T 21-04-2016 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 Gene3D G3DSA:3.30.465.10 343 424 8.0E-25 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 Pfam PF03471 Transporter associated domain 348 425 1.1E-18 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 SUPERFAMILY SSF54631 202 337 3.54E-21 T 21-04-2016 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 Gene3D G3DSA:3.10.580.10 202 342 6.8E-14 T 21-04-2016 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 SUPERFAMILY SSF56176 345 428 8.72E-21 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS01165 7a6b33a125aa4f5bfa002c8cff5dbe96 431 SMART SM01091 347 427 1.8E-23 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 PANTHER PTHR33795 1 169 1.1E-51 T 21-04-2016 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 Pfam PF13518 Helix-turn-helix domain 65 118 1.4E-11 T 21-04-2016 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 PANTHER PTHR33795:SF1 1 169 1.1E-51 T 21-04-2016 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 SUPERFAMILY SSF46689 1 52 1.06E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 Gene3D G3DSA:1.10.10.60 62 155 3.7E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 Gene3D G3DSA:1.10.10.60 6 51 3.5E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05155 b172af0a6e6d790610cf6dbf82f0f096 169 SUPERFAMILY SSF46689 57 161 4.12E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Pfam PF08245 Mur ligase middle domain 107 299 5.2E-43 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 PANTHER PTHR23135:SF3 12 456 6.4E-136 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 31.155 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Gene3D G3DSA:3.40.1390.10 1 81 3.6E-23 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 456 4.3E-135 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 401 4.9E-13 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Gene3D G3DSA:3.90.190.20 321 456 1.2E-34 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Pfam PF01225 Mur ligase family, catalytic domain 30 93 1.6E-5 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 Gene3D G3DSA:3.40.1190.10 83 317 1.1E-65 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 SUPERFAMILY SSF53623 101 317 9.68E-49 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 PANTHER PTHR23135 12 456 6.4E-136 T 21-04-2016 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 SUPERFAMILY SSF63418 1 95 5.49E-25 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00070 23aacd2615a1d07e24855f3c14d8584b 464 SUPERFAMILY SSF53244 321 456 1.28E-31 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 1.7E-150 T 21-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PANTHER PTHR22912 1 459 1.1E-265 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Gene3D G3DSA:3.30.390.30 342 460 7.3E-44 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Gene3D G3DSA:3.50.50.60 153 271 9.1E-35 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.1E-33 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.710621E-41 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.710621E-41 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.710621E-41 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.710621E-41 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.710621E-41 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.8E-63 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 SUPERFAMILY SSF51905 7 381 2.72E-57 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PANTHER PTHR22912:SF160 1 459 1.1E-265 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 8.818758E-69 T 21-04-2016 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 SUPERFAMILY SSF55424 343 466 4.81E-38 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Gene3D G3DSA:3.50.50.60 6 150 3.7E-65 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 Gene3D G3DSA:3.50.50.60 272 340 3.7E-65 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04035 29bb1c38e12063febfd1e9ea20bcb4c5 474 PIRSF PIRSF000350 1 469 4.7E-86 T 21-04-2016 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 PANTHER PTHR10060 5 262 9.6E-131 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 Pfam PF01026 TatD related DNase 7 259 4.1E-80 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 Gene3D G3DSA:3.20.20.140 5 261 2.0E-86 T 21-04-2016 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 6 14 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 PANTHER PTHR10060:SF20 5 262 9.6E-131 T 21-04-2016 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 SUPERFAMILY SSF51556 5 261 5.54E-88 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 PIRSF PIRSF005902 2 262 1.8E-79 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 6 259 2.9E-96 T 21-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APL_RS09615 3749108d77f2bba53db0fae6bb377471 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 195 211 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 PANTHER PTHR11806 1 627 0.0 T 21-04-2016 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 PANTHER PTHR11806:SF0 1 627 0.0 T 21-04-2016 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 21-04-2016 IPR020595 MnmG-related, conserved site APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 Pfam PF01134 Glucose inhibited division protein A 8 399 2.6E-164 T 21-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 Gene3D G3DSA:3.50.50.60 7 232 5.4E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.05 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 21-04-2016 IPR020595 MnmG-related, conserved site APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 SUPERFAMILY SSF51905 97 261 3.75E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 SUPERFAMILY SSF51905 7 66 3.75E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.9E-292 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 Pfam PF13932 GidA associated domain 403 616 5.8E-71 T 21-04-2016 IPR026904 GidA associated domain 3 APL_RS08795 bce009f8e591a13f5a0658d039860ef3 630 SMART SM01228 546 617 2.9E-44 T 21-04-2016 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 PANTHER PTHR10277:SF9 2 509 4.1E-247 T 21-04-2016 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 SUPERFAMILY SSF110921 406 500 4.32E-23 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 Gene3D G3DSA:3.20.20.70 2 347 3.9E-143 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 PANTHER PTHR10277 2 509 4.1E-247 T 21-04-2016 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 42.052 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 Pfam PF00682 HMGL-like 4 273 5.6E-103 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 500 2.2E-29 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 SUPERFAMILY SSF51569 2 291 1.5E-98 T 21-04-2016 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 2.9E-246 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS02020 5ca541aff12427ad404c2765561919ec 513 SMART SM00917 369 501 5.8E-35 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 PANTHER PTHR11670:SF27 1 200 7.6E-114 T 21-04-2016 APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 SUPERFAMILY SSF52016 3 194 1.61E-58 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 Gene3D G3DSA:3.20.19.10 5 194 1.1E-45 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-40 T 21-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 PANTHER PTHR11670 1 200 7.6E-114 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.229 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00715 7ed6eac24a4ef65b134ee26dd4ef3b66 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 8.2E-102 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 2.0E-16 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 PANTHER PTHR21109 1 71 1.2E-23 T 21-04-2016 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.3E-16 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.3E-16 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.3E-16 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.3E-16 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 21-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.132 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 Pfam PF01165 Ribosomal protein S21 4 56 3.9E-20 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS07770 8f5fb3ab97d28dcee0a8cc65f93e7520 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.3E-24 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.9E-134 T 21-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PANTHER PTHR10836 1 329 4.6E-239 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.7E-58 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PIRSF PIRSF000149 1 333 7.6E-132 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 Gene3D G3DSA:3.40.50.720 1 158 2.0E-76 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.4E-69 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 21-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 SUPERFAMILY SSF55347 149 312 1.07E-77 T 21-04-2016 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.7E-47 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.7E-47 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.7E-47 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.7E-47 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.7E-47 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 SMART SM00846 3 150 1.6E-93 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 Gene3D G3DSA:3.30.360.10 159 314 1.2E-84 T 21-04-2016 APL_RS02235 a4cba691a9fab7f4c563604ba1aad49c 334 SUPERFAMILY SSF51735 3 166 1.9E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 245 273 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Gene3D G3DSA:3.30.470.20 88 106 1.5E-44 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Gene3D G3DSA:3.30.470.20 179 301 1.5E-44 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Gene3D G3DSA:3.40.50.20 6 87 4.7E-27 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 SUPERFAMILY SSF56059 100 299 1.04E-52 T 21-04-2016 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Pfam PF01820 D-ala D-ala ligase N-terminus 7 89 9.9E-21 T 21-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Gene3D G3DSA:3.30.1490.20 110 178 1.7E-24 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 SUPERFAMILY SSF52440 6 99 5.08E-29 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 PANTHER PTHR23132 3 303 4.3E-89 T 21-04-2016 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 3.5E-63 T 21-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 PIRSF PIRSF039102 44 303 1.6E-86 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 301 2.3E-101 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00100 a94715d6fbdf9f326d8637a58798d23c 303 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 303 35.909 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS10630 83bf24876c6cd15af25b3d53e3eaaf10 140 Pfam PF03603 DNA polymerase III psi subunit 1 129 2.2E-31 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS10630 83bf24876c6cd15af25b3d53e3eaaf10 140 Gene3D G3DSA:3.40.50.10220 25 139 7.7E-25 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS10630 83bf24876c6cd15af25b3d53e3eaaf10 140 SUPERFAMILY SSF102220 27 139 1.16E-26 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS10630 83bf24876c6cd15af25b3d53e3eaaf10 140 PIRSF PIRSF029225 1 134 2.3E-34 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 Gene3D G3DSA:3.40.109.10 5 238 3.2E-69 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 Pfam PF00881 Nitroreductase family 10 160 3.5E-20 T 21-04-2016 IPR029479 Nitroreductase APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 PANTHER PTHR23026:SF98 1 186 1.3E-65 T 21-04-2016 APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 PANTHER PTHR23026 1 186 1.3E-65 T 21-04-2016 APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 SUPERFAMILY SSF55469 5 237 6.41E-66 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS02485 16defa1e8e95e109250852512e0ebcc3 239 PIRSF PIRSF005426 2 239 1.6E-77 T 21-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 APL_RS03365 9c5a98f25c79647ae54634a634fda659 61 Gene3D G3DSA:3.30.160.160 1 47 1.5E-25 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 APL_RS03365 9c5a98f25c79647ae54634a634fda659 61 Pfam PF07411 Domain of unknown function (DUF1508) 8 56 4.6E-21 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 APL_RS03365 9c5a98f25c79647ae54634a634fda659 61 SUPERFAMILY SSF160113 1 58 3.53E-19 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 Pfam PF00701 Dihydrodipicolinate synthetase family 8 293 4.0E-113 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 21-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 SUPERFAMILY SSF51569 7 295 7.01E-97 T 21-04-2016 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PANTHER PTHR12128 1 297 2.2E-133 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 63.414 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 1.4E-115 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PIRSF PIRSF001365 3 297 5.8E-92 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 Gene3D G3DSA:3.20.20.70 6 297 8.5E-113 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 21-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PANTHER PTHR12128:SF34 1 297 2.2E-133 T 21-04-2016 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 6.1E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 6.1E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 6.1E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 6.1E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS04700 8bbbc323e231315d8675571b8263b2db 297 SMART SM01130 7 295 1.0E-136 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APL_RS05650 1ee037f0698c798d84f70eb84399d308 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 4 465 7.8E-154 T 21-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APL_RS05650 1ee037f0698c798d84f70eb84399d308 468 PANTHER PTHR11785 2 464 6.9E-184 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05650 1ee037f0698c798d84f70eb84399d308 468 Pfam PF13520 Amino acid permease 6 418 6.5E-72 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05650 1ee037f0698c798d84f70eb84399d308 468 PIRSF PIRSF006060 1 467 1.0E-53 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05650 1ee037f0698c798d84f70eb84399d308 468 PANTHER PTHR11785:SF77 2 464 6.9E-184 T 21-04-2016 APL_RS02805 64ae7fc6984e172e3e3d5dca348b197a 93 Pfam PF00899 ThiF family 11 90 1.0E-28 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS02805 64ae7fc6984e172e3e3d5dca348b197a 93 SUPERFAMILY SSF69572 2 90 2.09E-38 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS02805 64ae7fc6984e172e3e3d5dca348b197a 93 PANTHER PTHR10953:SF158 1 93 1.3E-37 T 21-04-2016 APL_RS02805 64ae7fc6984e172e3e3d5dca348b197a 93 PANTHER PTHR10953 1 93 1.3E-37 T 21-04-2016 APL_RS02805 64ae7fc6984e172e3e3d5dca348b197a 93 Gene3D G3DSA:3.40.50.720 2 92 4.2E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS05795 863e53af713641112c36bca632b72dd9 345 SUPERFAMILY SSF51445 1 288 6.63E-83 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS05795 863e53af713641112c36bca632b72dd9 345 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 2 290 9.2E-93 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APL_RS05795 863e53af713641112c36bca632b72dd9 345 PANTHER PTHR30480 1 292 2.7E-126 T 21-04-2016 APL_RS05795 863e53af713641112c36bca632b72dd9 345 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 335 47.574 T 21-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 APL_RS05795 863e53af713641112c36bca632b72dd9 345 Gene3D G3DSA:3.20.20.300 1 292 2.2E-89 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APL_RS05795 863e53af713641112c36bca632b72dd9 345 PANTHER PTHR30480:SF7 1 292 2.7E-126 T 21-04-2016 APL_RS05795 863e53af713641112c36bca632b72dd9 345 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 21-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APL_RS02375 fceb019f274cf97438221d708073541b 571 Pfam PF00672 HAMP domain 162 230 5.4E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APL_RS02375 fceb019f274cf97438221d708073541b 571 PANTHER PTHR24421:SF25 7 293 8.6E-182 T 21-04-2016 APL_RS02375 fceb019f274cf97438221d708073541b 571 PANTHER PTHR24421:SF25 364 567 8.6E-182 T 21-04-2016 APL_RS02375 fceb019f274cf97438221d708073541b 571 SMART SM00304 181 234 1.3E-6 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APL_RS02375 fceb019f274cf97438221d708073541b 571 PANTHER PTHR24421 7 293 8.6E-182 T 21-04-2016 APL_RS02375 fceb019f274cf97438221d708073541b 571 PANTHER PTHR24421 364 567 8.6E-182 T 21-04-2016 APL_RS02375 fceb019f274cf97438221d708073541b 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 566 1.3E-9 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS02375 fceb019f274cf97438221d708073541b 571 Pfam PF07730 Histidine kinase 369 434 3.8E-16 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APL_RS02375 fceb019f274cf97438221d708073541b 571 SUPERFAMILY SSF158472 182 232 1.06E-6 T 21-04-2016 APL_RS02375 fceb019f274cf97438221d708073541b 571 Gene3D G3DSA:3.30.565.10 436 566 7.5E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS02375 fceb019f274cf97438221d708073541b 571 SMART SM00387 475 569 2.5E-9 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS02375 fceb019f274cf97438221d708073541b 571 SUPERFAMILY SSF55874 442 566 1.96E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS02375 fceb019f274cf97438221d708073541b 571 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 37 135 1.3E-20 T 21-04-2016 IPR029095 NarX-like, N-terminal APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Gene3D G3DSA:3.40.190.10 173 266 1.0E-25 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.9E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 SUPERFAMILY SSF53850 90 294 4.48E-40 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 PANTHER PTHR30118 1 299 2.1E-84 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 PANTHER PTHR30118:SF8 1 299 2.1E-84 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Gene3D G3DSA:3.40.190.10 90 172 4.7E-26 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Gene3D G3DSA:3.40.190.10 271 296 4.7E-26 T 21-04-2016 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 SUPERFAMILY SSF46785 5 86 2.72E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Gene3D G3DSA:1.10.10.10 2 88 1.1E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 Pfam PF03466 LysR substrate binding domain 95 296 3.9E-24 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.6E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.6E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06225 b557ba7f04cb39faee5d82f18841dbd8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.6E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS05140 3bb571520b19b39a95d5a57135368863 353 SUPERFAMILY SSF53756 33 309 2.67E-33 T 21-04-2016 APL_RS05140 3bb571520b19b39a95d5a57135368863 353 Gene3D G3DSA:3.40.50.2000 183 310 2.7E-14 T 21-04-2016 APL_RS05140 3bb571520b19b39a95d5a57135368863 353 Gene3D G3DSA:3.40.50.2000 33 80 4.5E-6 T 21-04-2016 APL_RS05140 3bb571520b19b39a95d5a57135368863 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 233 297 1.6E-5 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 SUPERFAMILY SSF52540 1 353 7.43E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 SUPERFAMILY SSF52540 353 790 3.51E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 PIRSF PIRSF000980 1 1109 0.0 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 Gene3D G3DSA:1.10.10.160 86 201 4.1E-28 T 21-04-2016 IPR013986 DExx box DNA helicase domain APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 Gene3D G3DSA:3.40.50.300 647 744 4.1E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 Gene3D G3DSA:3.40.50.300 355 450 4.1E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 SUPERFAMILY SSF52980 816 1102 3.32E-57 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 PANTHER PTHR30591 174 1073 1.4E-222 T 21-04-2016 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 PANTHER PTHR30591 1 158 1.4E-222 T 21-04-2016 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1031 1.4E-302 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1106 12.381 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 PANTHER PTHR30591:SF1 174 1073 1.4E-222 T 21-04-2016 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 PANTHER PTHR30591:SF1 1 158 1.4E-222 T 21-04-2016 APL_RS10015 b80176bf9aa2e82b5dc17803ed4fba05 1114 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 797 1.8E-277 T 21-04-2016 APL_RS09595 47ccf99ffcfbebdf8b33cc0a80b314f2 129 PANTHER PTHR35813 1 125 6.0E-39 T 21-04-2016 APL_RS09595 47ccf99ffcfbebdf8b33cc0a80b314f2 129 Pfam PF04304 Protein of unknown function (DUF454) 2 115 5.2E-39 T 21-04-2016 IPR007401 Protein of unknown function DUF454 APL_RS09595 47ccf99ffcfbebdf8b33cc0a80b314f2 129 PANTHER PTHR35813:SF1 1 125 6.0E-39 T 21-04-2016 APL_RS09595 47ccf99ffcfbebdf8b33cc0a80b314f2 129 PIRSF PIRSF016789 1 122 3.2E-34 T 21-04-2016 IPR007401 Protein of unknown function DUF454 APL_RS04540 061b7648a85098d0479192298d6b2314 422 Gene3D G3DSA:3.40.630.10 329 422 2.5E-71 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 Gene3D G3DSA:3.40.630.10 6 47 2.5E-71 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 Gene3D G3DSA:3.40.630.10 85 215 2.5E-71 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 SUPERFAMILY SSF53187 85 233 9.43E-58 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 SUPERFAMILY SSF53187 5 47 9.43E-58 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 SUPERFAMILY SSF53187 332 421 9.43E-58 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 Pfam PF01546 Peptidase family M20/M25/M40 103 418 1.8E-21 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575:SF3 136 420 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575:SF3 84 114 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575:SF3 1 46 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 Gene3D G3DSA:3.30.70.360 220 326 3.8E-29 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS04540 061b7648a85098d0479192298d6b2314 422 PIRSF PIRSF005962 2 422 4.7E-104 T 21-04-2016 IPR017439 Amidohydrolase GO:0016787 APL_RS04540 061b7648a85098d0479192298d6b2314 422 SUPERFAMILY SSF55031 221 326 5.89E-26 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS04540 061b7648a85098d0479192298d6b2314 422 Pfam PF07687 Peptidase dimerisation domain 223 310 4.8E-12 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575 136 420 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575 84 114 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 PANTHER PTHR30575 1 46 8.5E-153 T 21-04-2016 APL_RS04540 061b7648a85098d0479192298d6b2314 422 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 409 1.1E-89 T 21-04-2016 IPR017439 Amidohydrolase GO:0016787 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 Pfam PF00849 RNA pseudouridylate synthase 105 252 1.6E-28 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 317 8.1E-97 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 Pfam PF01479 S4 domain 23 69 2.4E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 SUPERFAMILY SSF55120 94 317 1.5E-64 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 PANTHER PTHR11079:SF84 4 319 1.1E-155 T 21-04-2016 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 Gene3D G3DSA:3.10.290.10 23 71 2.4E-7 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 SMART SM00363 23 82 1.4E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 143 157 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 PANTHER PTHR11079 4 319 1.1E-155 T 21-04-2016 APL_RS09985 a67bbc5ab42df41834c8e7f587893573 321 SUPERFAMILY SSF55174 22 73 3.53E-9 T 21-04-2016 APL_RS01530 1d99760dd3cd902c50f17285e5153679 378 PANTHER PTHR30365:SF6 1 378 2.1E-176 T 21-04-2016 APL_RS01530 1d99760dd3cd902c50f17285e5153679 378 PIRSF PIRSF000267 2 376 1.4E-127 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APL_RS01530 1d99760dd3cd902c50f17285e5153679 378 PANTHER PTHR30365 1 378 2.1E-176 T 21-04-2016 APL_RS01530 1d99760dd3cd902c50f17285e5153679 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 2.8E-107 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APL_RS01530 1d99760dd3cd902c50f17285e5153679 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 2.8E-176 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 314 3.7E-102 T 21-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 Gene3D G3DSA:3.40.190.10 112 245 8.3E-34 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 Gene3D G3DSA:3.40.190.10 23 104 1.6E-57 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 Gene3D G3DSA:3.40.190.10 246 315 1.6E-57 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 PANTHER PTHR30024 1 314 4.5E-80 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 PANTHER PTHR30024:SF13 1 314 4.5E-80 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 SUPERFAMILY SSF53850 23 315 3.74E-81 T 21-04-2016 APL_RS08435 5094973a922a10b0ffe08f56e145517f 316 Pfam PF16868 NMT1-like family 28 314 1.6E-84 T 21-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family APL_RS05885 ca333ca91aa64728674efc30ffc9e3cf 124 SUPERFAMILY SSF47175 23 124 2.05E-33 T 21-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APL_RS05885 ca333ca91aa64728674efc30ffc9e3cf 124 Gene3D G3DSA:1.20.120.10 23 124 1.5E-27 T 21-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APL_RS05885 ca333ca91aa64728674efc30ffc9e3cf 124 PIRSF PIRSF000029 1 124 1.0E-21 T 21-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APL_RS05885 ca333ca91aa64728674efc30ffc9e3cf 124 Pfam PF07361 Cytochrome b562 24 124 1.4E-30 T 21-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 21-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 Gene3D G3DSA:3.30.70.60 1 103 1.4E-41 T 21-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 SUPERFAMILY SSF54995 1 103 8.76E-37 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-37 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 PANTHER PTHR21011:SF1 1 121 1.6E-39 T 21-04-2016 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.867 T 21-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 PANTHER PTHR21011 1 121 1.6E-39 T 21-04-2016 APL_RS06130 ff4ab278b0dcb7b0bc8e662a349985f2 124 Pfam PF01250 Ribosomal protein S6 3 90 1.6E-28 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 SUPERFAMILY SSF82689 196 293 7.98E-27 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 158 192 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 Gene3D G3DSA:2.30.30.60 144 193 1.1E-17 T 21-04-2016 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 PANTHER PTHR30221 35 302 1.1E-79 T 21-04-2016 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 PANTHER PTHR30221:SF7 35 302 1.1E-79 T 21-04-2016 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 Gene3D G3DSA:3.30.70.100 197 281 7.9E-24 T 21-04-2016 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 SUPERFAMILY SSF82861 42 127 3.14E-18 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 SUPERFAMILY SSF50182 129 194 2.42E-17 T 21-04-2016 IPR010920 LSM domain APL_RS09995 719759b26dcd0b5c2fd8df206d0ee09d 303 Pfam PF00924 Mechanosensitive ion channel 86 283 1.4E-53 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Gene3D G3DSA:3.40.50.300 104 276 5.4E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Gene3D G3DSA:1.10.1750.10 346 446 1.0E-42 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PANTHER PTHR30050 1 447 3.0E-216 T 21-04-2016 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Gene3D G3DSA:1.10.8.60 278 345 4.1E-29 T 21-04-2016 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Pfam PF11638 DnaA N-terminal domain 3 61 8.4E-17 T 21-04-2016 IPR024633 DnaA N-terminal domain APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 SMART SM00760 355 424 1.2E-46 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 356 424 9.4E-34 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 SUPERFAMILY SSF52540 111 323 2.72E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 21-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 445 5.6E-180 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 2.2E-47 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 2.2E-47 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 2.2E-47 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 2.2E-47 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 243 270 2.2E-47 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 SMART SM00382 144 275 1.0E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 446 33.057 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 PANTHER PTHR30050:SF2 1 447 3.0E-216 T 21-04-2016 APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 Pfam PF00308 Bacterial dnaA protein 111 329 1.4E-93 T 21-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APL_RS00005 058739067c1a9293147ad92b51d4bd7d 447 SUPERFAMILY SSF48295 343 446 7.85E-39 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 PANTHER PTHR21499:SF3 6 450 1.7E-143 T 21-04-2016 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 5 449 3.7E-128 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 SUPERFAMILY SSF55021 377 449 1.9E-14 T 21-04-2016 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 449 3.2E-125 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 PANTHER PTHR21499 6 450 1.7E-143 T 21-04-2016 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 SUPERFAMILY SSF53633 5 293 5.5E-79 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 Gene3D G3DSA:3.40.1160.10 4 53 2.0E-64 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 Gene3D G3DSA:3.40.1160.10 106 295 2.0E-64 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 PIRSF PIRSF000726 2 450 1.3E-133 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 SUPERFAMILY SSF55021 298 383 2.46E-14 T 21-04-2016 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 Gene3D G3DSA:3.30.2130.10 303 345 3.3E-4 T 21-04-2016 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 Pfam PF00696 Amino acid kinase family 6 278 1.4E-51 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS03700 2675459a297b6d6af8d82cf113822a04 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS09140 44b6f56394139c982d5376655afa3d1d 418 Pfam PF07805 HipA-like N-terminal domain 159 243 6.5E-12 T 21-04-2016 IPR012894 HipA, N-terminal subdomain 2 APL_RS09140 44b6f56394139c982d5376655afa3d1d 418 PANTHER PTHR30124:SF2 259 391 6.0E-15 T 21-04-2016 APL_RS09140 44b6f56394139c982d5376655afa3d1d 418 Pfam PF07804 HipA-like C-terminal domain 251 383 9.0E-15 T 21-04-2016 IPR012893 HipA-like, C-terminal APL_RS09140 44b6f56394139c982d5376655afa3d1d 418 Pfam PF13657 HipA N-terminal domain 18 117 3.6E-16 T 21-04-2016 IPR017508 HipA, N-terminal subdomain 1 APL_RS09140 44b6f56394139c982d5376655afa3d1d 418 PANTHER PTHR30124 259 391 6.0E-15 T 21-04-2016 APL_RS06280 f0341927315fffdae94f10bff21bafef 557 Gene3D G3DSA:3.30.565.10 17 185 2.3E-22 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06280 f0341927315fffdae94f10bff21bafef 557 SUPERFAMILY SSF55874 19 207 5.63E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06280 f0341927315fffdae94f10bff21bafef 557 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 154 2.4E-24 T 21-04-2016 APL_RS06280 f0341927315fffdae94f10bff21bafef 557 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 414 551 3.2E-36 T 21-04-2016 IPR012654 Conserved hypothetical protein CHP02391 APL_RS06280 f0341927315fffdae94f10bff21bafef 557 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 416 551 3.2E-15 T 21-04-2016 IPR012654 Conserved hypothetical protein CHP02391 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 SUPERFAMILY SSF161098 11 264 2.09E-51 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 Gene3D G3DSA:1.10.3720.10 13 269 3.3E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 12 268 1.7E-111 T 21-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 268 2.1E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 PANTHER PTHR30406 10 270 3.5E-131 T 21-04-2016 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 PANTHER PTHR30406:SF1 10 270 3.5E-131 T 21-04-2016 APL_RS09840 9984adf1be49e32ebff9c1cb64abe8aa 270 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 265 1.2E-90 T 21-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 PANTHER PTHR10173:SF40 3 150 4.1E-66 T 21-04-2016 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 160 36.547 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 Gene3D G3DSA:3.30.1060.10 3 155 5.4E-67 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 PANTHER PTHR10173 3 150 4.1E-66 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 4.3E-61 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 154 2.0E-56 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APL_RS05355 ac1c840c2d06965510fc2d89add38f45 168 SUPERFAMILY SSF55068 2 157 8.89E-64 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 475 42.764 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 SUPERFAMILY SSF51984 20 105 1.7E-28 T 21-04-2016 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 20 469 7.4E-185 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Pfam PF08245 Mur ligase middle domain 123 303 3.9E-29 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 PANTHER PTHR23135 13 463 4.2E-222 T 21-04-2016 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Gene3D G3DSA:3.90.190.20 325 473 7.5E-55 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 SUPERFAMILY SSF53244 322 470 6.64E-46 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 SUPERFAMILY SSF53623 104 321 1.7E-71 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Pfam PF01225 Mur ligase family, catalytic domain 20 117 2.0E-28 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 412 1.8E-21 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Gene3D G3DSA:3.40.50.720 20 105 1.2E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 Gene3D G3DSA:3.40.1190.10 107 324 8.6E-83 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00095 e1f0d35177a2e094c54c693bb7e91eb9 475 PANTHER PTHR23135:SF5 13 463 4.2E-222 T 21-04-2016 APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 Gene3D G3DSA:1.10.3720.10 86 292 8.5E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 PANTHER PTHR30465:SF10 6 296 3.4E-128 T 21-04-2016 APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 PANTHER PTHR30465 6 296 3.4E-128 T 21-04-2016 APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 63 2.2E-13 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 295 4.5E-29 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00355 ce65a82ea3594ab1441a0f8127127805 296 SUPERFAMILY SSF161098 89 277 1.14E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 SUPERFAMILY SSF52540 265 498 2.66E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 190 3.9E-24 T 21-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 PANTHER PTHR30195 246 937 1.1E-27 T 21-04-2016 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 PANTHER PTHR30195 92 193 1.1E-27 T 21-04-2016 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 Pfam PF04851 Type III restriction enzyme, res subunit 294 471 2.0E-21 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 SMART SM00487 292 511 0.0012 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 Gene3D G3DSA:3.40.50.300 291 471 1.8E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 PANTHER PTHR30195:SF14 246 937 1.1E-27 T 21-04-2016 APL_RS06255 130fa4fa8054ccd64c4e386c519632c5 1044 PANTHER PTHR30195:SF14 92 193 1.1E-27 T 21-04-2016 APL_RS07885 88d6ec04448324529c3f61013bbba55b 100 Gene3D G3DSA:1.10.260.40 23 86 1.2E-10 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS07885 88d6ec04448324529c3f61013bbba55b 100 SMART SM00530 32 87 1.3E-4 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS07885 88d6ec04448324529c3f61013bbba55b 100 SUPERFAMILY SSF47413 25 92 5.35E-12 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS07885 88d6ec04448324529c3f61013bbba55b 100 Pfam PF13744 Helix-turn-helix domain 32 88 5.9E-11 T 21-04-2016 APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 SUPERFAMILY SSF52540 407 517 3.99E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 SUPERFAMILY SSF52540 76 116 3.99E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 SUPERFAMILY SSF52540 75 265 1.27E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 SUPERFAMILY SSF52540 4 28 1.27E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 Gene3D G3DSA:3.40.50.300 76 238 8.0E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 Gene3D G3DSA:3.40.50.300 5 20 8.0E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04250 62186bcafb6473b3b0e66e0527ee547b 870 Pfam PF04851 Type III restriction enzyme, res subunit 5 236 2.2E-17 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 PANTHER PTHR30135 20 263 2.5E-97 T 21-04-2016 APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 20 268 3.1E-94 T 21-04-2016 IPR010119 Gluconeogenesis factor APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 Pfam PF01933 Uncharacterised protein family UPF0052 20 299 4.2E-77 T 21-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 Gene3D G3DSA:3.40.50.10680 90 306 3.7E-48 T 21-04-2016 APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 Hamap MF_00973 Gluconeogenesis factor. 16 307 31.402 T 21-04-2016 IPR010119 Gluconeogenesis factor APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 PANTHER PTHR30135:SF3 20 263 2.5E-97 T 21-04-2016 APL_RS03980 ed76fccf5fbe00c25e225d059049121c 309 SUPERFAMILY SSF142338 19 301 3.14E-83 T 21-04-2016 APL_RS06020 2c964647846792446927e53818b052d4 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.8E-42 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APL_RS06020 2c964647846792446927e53818b052d4 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.8E-42 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APL_RS06020 2c964647846792446927e53818b052d4 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.8E-42 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APL_RS06020 2c964647846792446927e53818b052d4 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.8E-42 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APL_RS06020 2c964647846792446927e53818b052d4 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.8E-42 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APL_RS06020 2c964647846792446927e53818b052d4 156 Pfam PF00293 NUDIX domain 6 136 2.3E-20 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS06020 2c964647846792446927e53818b052d4 156 SUPERFAMILY SSF55811 3 143 4.33E-27 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS06020 2c964647846792446927e53818b052d4 156 PANTHER PTHR22769:SF28 1 148 8.2E-51 T 21-04-2016 APL_RS06020 2c964647846792446927e53818b052d4 156 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APL_RS06020 2c964647846792446927e53818b052d4 156 PANTHER PTHR22769 1 148 8.2E-51 T 21-04-2016 APL_RS06020 2c964647846792446927e53818b052d4 156 Gene3D G3DSA:3.90.79.10 1 143 1.0E-32 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 SUPERFAMILY SSF103473 5 390 1.96E-51 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 Gene3D G3DSA:1.20.1250.20 5 168 3.5E-28 T 21-04-2016 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 PANTHER PTHR11662:SF141 5 393 1.9E-60 T 21-04-2016 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 PANTHER PTHR11662 5 393 1.9E-60 T 21-04-2016 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 Pfam PF07690 Major Facilitator Superfamily 4 349 2.8E-37 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 Gene3D G3DSA:1.20.1250.20 198 392 3.0E-26 T 21-04-2016 APL_RS09755 910db6f12b03a63dd814f7d05c4f3d4a 397 PIRSF PIRSF002808 2 397 8.2E-62 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APL_RS04520 e2318f153efe04104128697df5ebe83a 279 SUPERFAMILY SSF55154 1 203 1.8E-40 T 21-04-2016 IPR033469 CYTH-like domain APL_RS04520 e2318f153efe04104128697df5ebe83a 279 PANTHER PTHR39569:SF1 2 200 9.7E-65 T 21-04-2016 APL_RS04520 e2318f153efe04104128697df5ebe83a 279 Pfam PF01928 CYTH domain 3 196 7.5E-29 T 21-04-2016 IPR023577 CYTH domain APL_RS04520 e2318f153efe04104128697df5ebe83a 279 Gene3D G3DSA:2.40.320.10 2 202 2.6E-30 T 21-04-2016 IPR023577 CYTH domain APL_RS04520 e2318f153efe04104128697df5ebe83a 279 SMART SM01118 2 199 2.7E-35 T 21-04-2016 IPR023577 CYTH domain APL_RS04520 e2318f153efe04104128697df5ebe83a 279 PANTHER PTHR39569 2 200 9.7E-65 T 21-04-2016 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Pfam PF09334 tRNA synthetases class I (M) 5 392 4.4E-165 T 21-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 SUPERFAMILY SSF50249 572 678 2.69E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Pfam PF01588 Putative tRNA binding domain 583 676 1.3E-24 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Gene3D G3DSA:2.40.50.140 571 679 7.8E-42 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Pfam PF08264 Anticodon-binding domain of tRNA 415 563 8.9E-6 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Gene3D G3DSA:2.20.28.20 142 173 3.1E-19 T 21-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 2.0E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PANTHER PTHR11946 3 634 2.8E-253 T 21-04-2016 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 541 41.317 T 21-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 SUPERFAMILY SSF47323 382 591 2.06E-46 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 PANTHER PTHR11946:SF86 3 634 2.8E-253 T 21-04-2016 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 SUPERFAMILY SSF52374 3 138 4.16E-103 T 21-04-2016 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 SUPERFAMILY SSF52374 173 383 4.16E-103 T 21-04-2016 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 536 679 4.1E-50 T 21-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Gene3D G3DSA:3.40.50.620 180 375 2.6E-90 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Gene3D G3DSA:3.40.50.620 3 141 2.6E-90 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 SUPERFAMILY SSF57770 139 173 1.44E-12 T 21-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 531 3.7E-204 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APL_RS01815 3f64a368ffcf4ee215b2529c446e5bad 679 Gene3D G3DSA:1.10.730.10 376 530 1.0E-43 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Pfam PF00085 Thioredoxin 6 101 1.3E-10 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 PANTHER PTHR10438:SF288 5 132 8.3E-31 T 21-04-2016 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Gene3D G3DSA:1.25.40.10 197 281 6.3E-25 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Pfam PF14559 Tetratricopeptide repeat 122 189 3.2E-15 T 21-04-2016 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Gene3D G3DSA:3.40.30.10 3 105 1.2E-16 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Pfam PF14561 Tetratricopeptide repeat 194 281 7.8E-23 T 21-04-2016 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 PANTHER PTHR10438 5 132 8.3E-31 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 Gene3D G3DSA:1.25.40.10 107 195 2.9E-32 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 SUPERFAMILY SSF48452 214 244 1.41E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 SUPERFAMILY SSF48452 107 180 1.41E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS00425 fffe68b71b5b567659946c96620c3fba 281 SUPERFAMILY SSF52833 4 110 3.85E-22 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 SUPERFAMILY SSF111331 11 291 1.57E-90 T 21-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 Pfam PF01513 ATP-NAD kinase 11 274 3.7E-73 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 Gene3D G3DSA:2.60.200.30 146 266 8.4E-47 T 21-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 Gene3D G3DSA:3.40.50.10330 9 145 1.4E-34 T 21-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 Hamap MF_00361 NAD kinase [nadK]. 9 290 34.551 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APL_RS01085 47c3468b4a62cd393395ba7716abf72f 295 PANTHER PTHR20275 5 291 1.4E-99 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 430 4.4E-206 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 21-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Gene3D G3DSA:3.40.440.10 196 266 2.2E-70 T 21-04-2016 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Gene3D G3DSA:3.40.440.10 4 94 2.2E-70 T 21-04-2016 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 SMART SM00788 4 425 1.2E-302 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 SUPERFAMILY SSF52540 4 430 2.23E-181 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Gene3D G3DSA:1.10.300.10 103 195 4.2E-37 T 21-04-2016 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Gene3D G3DSA:3.90.170.10 267 426 1.9E-67 T 21-04-2016 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.452 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.2E-178 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 PANTHER PTHR11846 1 429 5.3E-260 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APL_RS05610 2c07a342640e3661e91cfc2599c1a550 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 21-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APL_RS00370 157d83549384deb644ac607fa1bc92fc 136 PIRSF PIRSF029598 1 135 2.9E-35 T 21-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APL_RS00370 157d83549384deb644ac607fa1bc92fc 136 PANTHER PTHR37819:SF1 1 127 2.3E-28 T 21-04-2016 APL_RS00370 157d83549384deb644ac607fa1bc92fc 136 Pfam PF06146 Phosphate-starvation-inducible E 59 121 1.6E-13 T 21-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like APL_RS00370 157d83549384deb644ac607fa1bc92fc 136 PANTHER PTHR37819 1 127 2.3E-28 T 21-04-2016 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PANTHER PTHR33910:SF1 10 136 4.1E-27 T 21-04-2016 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 12.926 T 21-04-2016 IPR022943 Preprotein translocase subunit SecE APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 132 1.6E-18 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 Gene3D G3DSA:1.20.5.1030 75 133 4.4E-23 T 21-04-2016 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 80 132 4.5E-19 T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PRINTS PR01650 Bacterial translocase SecE signature 75 95 1.1E-30 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PRINTS PR01650 Bacterial translocase SecE signature 119 135 1.1E-30 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PRINTS PR01650 Bacterial translocase SecE signature 99 119 1.1E-30 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PRINTS PR01650 Bacterial translocase SecE signature 54 75 1.1E-30 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APL_RS09105 8ff2e9efbf039be5d12fc766533029e7 137 PANTHER PTHR33910 10 136 4.1E-27 T 21-04-2016 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 346 4.7E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 Gene3D G3DSA:3.90.120.10 273 333 1.8E-4 T 21-04-2016 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 Gene3D G3DSA:3.40.50.150 1 203 3.2E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 116 130 2.0E-11 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 162 175 2.0E-11 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 2.0E-11 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 SUPERFAMILY SSF53335 5 347 5.13E-77 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 PANTHER PTHR10629 2 350 2.6E-50 T 21-04-2016 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 PANTHER PTHR10629:SF32 2 350 2.6E-50 T 21-04-2016 APL_RS06285 2a2835e6f0107422a1308bb1b46f1932 350 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 345 1.2E-39 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 Gene3D G3DSA:3.40.50.300 12 264 7.1E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 307 1.4E-21 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 SMART SM00382 48 240 1.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 SUPERFAMILY SSF52540 13 262 7.38E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 Pfam PF00005 ABC transporter 40 190 1.4E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.8E-29 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 PANTHER PTHR24220 15 329 2.1E-200 T 21-04-2016 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS00365 edff9ebd4f6093329f7ba8a1e6579915 329 PANTHER PTHR24220:SF493 15 329 2.1E-200 T 21-04-2016 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 Gene3D G3DSA:3.40.50.300 197 478 2.3E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 Pfam PF03796 DnaB-like helicase C terminal domain 203 477 4.2E-110 T 21-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 2.4E-36 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 SUPERFAMILY SSF48024 22 132 1.57E-38 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 SUPERFAMILY SSF52540 201 470 3.32E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 PANTHER PTHR30153 265 487 1.4E-208 T 21-04-2016 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 PANTHER PTHR30153 7 247 1.4E-208 T 21-04-2016 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 479 7.5E-170 T 21-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APL_RS03715 0cab6b881b484bc1674d97f789b895b6 487 Gene3D G3DSA:1.10.860.10 24 125 4.2E-40 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 325 537 1.3E-54 T 21-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 12 609 6.4E-203 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Gene3D G3DSA:3.90.226.10 322 430 1.2E-63 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Gene3D G3DSA:3.90.226.10 215 310 1.9E-56 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Gene3D G3DSA:3.90.226.10 467 551 1.2E-63 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Gene3D G3DSA:3.90.226.10 25 172 1.9E-56 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 PIRSF PIRSF001217 1 618 4.2E-212 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 PANTHER PTHR33209 4 614 2.4E-182 T 21-04-2016 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 SUPERFAMILY SSF52096 466 526 2.14E-42 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 PANTHER PTHR33209:SF1 4 614 2.4E-182 T 21-04-2016 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 SUPERFAMILY SSF52096 321 438 2.14E-42 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 SUPERFAMILY SSF52096 207 282 1.62E-23 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 SUPERFAMILY SSF52096 28 176 1.62E-23 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Pfam PF01343 Peptidase family S49 136 286 8.2E-32 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APL_RS06615 f58da9274e0c8c3903a9fe552a30f73c 618 Pfam PF01343 Peptidase family S49 390 539 2.0E-45 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Gene3D G3DSA:3.40.50.20 2 95 8.9E-39 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-189 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 SUPERFAMILY SSF51246 329 423 2.3E-31 T 21-04-2016 IPR011054 Rudiment single hybrid motif APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Gene3D G3DSA:3.90.600.10 330 422 5.6E-33 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 21-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 2.4E-26 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 PANTHER PTHR10520 1 426 1.9E-289 T 21-04-2016 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.3E-85 T 21-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 SUPERFAMILY SSF52440 1 103 1.58E-37 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 SUPERFAMILY SSF56059 104 320 6.54E-68 T 21-04-2016 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Gene3D G3DSA:3.30.470.20 191 327 5.5E-64 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.459 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 SMART SM01209 103 296 2.3E-141 T 21-04-2016 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Gene3D G3DSA:3.30.1490.20 121 190 3.2E-34 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 9.0E-37 T 21-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS06135 5b3392fd830b119e8afd5ec06f33f802 428 SMART SM01210 330 423 9.3E-51 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS02285 fbe8188208d0537b0489552503b79809 232 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 51 228 2.2E-31 T 21-04-2016 IPR003741 LUD domain APL_RS02285 fbe8188208d0537b0489552503b79809 232 Gene3D G3DSA:3.40.50.10420 44 230 1.6E-48 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APL_RS02285 fbe8188208d0537b0489552503b79809 232 SUPERFAMILY SSF100950 43 230 1.55E-41 T 21-04-2016 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PANTHER PTHR30371:SF0 4 244 6.0E-111 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 3.3E-78 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PANTHER PTHR30371 4 244 6.0E-111 T 21-04-2016 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 ProSitePatterns PS01218 TatC family signature. 154 173 - T 21-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 4.3E-49 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 4.3E-49 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 4.3E-49 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 4.3E-49 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 7.9E-67 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10535 3d9a1f28d478a8efe4e4a2f0ab880080 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 240 18.084 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 Gene3D G3DSA:3.40.390.10 461 675 4.0E-97 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 Gene3D G3DSA:3.40.390.10 296 417 4.0E-97 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 Pfam PF05649 Peptidase family M13 38 414 2.3E-86 T 21-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 Pfam PF01431 Peptidase family M13 470 672 9.3E-67 T 21-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 PANTHER PTHR11733 36 675 2.2E-166 T 21-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 SUPERFAMILY SSF55486 25 675 1.26E-194 T 21-04-2016 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 517 3.3E-21 T 21-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 572 583 3.3E-21 T 21-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 462 474 3.3E-21 T 21-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APL_RS10160 dd1665aec4e5b09350484153dc5f1e98 675 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 3.3E-21 T 21-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 175 23.472 T 21-04-2016 IPR006839 Ribosome-associated, YjgA APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 SUPERFAMILY SSF158710 32 173 1.23E-49 T 21-04-2016 APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 Gene3D G3DSA:1.10.60.30 107 175 1.7E-28 T 21-04-2016 IPR023153 PSPTO4464-like domain APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 PANTHER PTHR38101 1 176 2.2E-73 T 21-04-2016 APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 PANTHER PTHR38101:SF1 1 176 2.2E-73 T 21-04-2016 APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 Pfam PF04751 Protein of unknown function (DUF615) 21 171 3.5E-56 T 21-04-2016 IPR006839 Ribosome-associated, YjgA APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 Gene3D G3DSA:1.10.60.30 32 105 7.3E-32 T 21-04-2016 IPR023153 PSPTO4464-like domain APL_RS03800 91f6aee1c6cad846285a659cc5016b8d 176 PIRSF PIRSF016183 3 176 5.5E-70 T 21-04-2016 IPR006839 Ribosome-associated, YjgA APL_RS01895 adbaa58343587b234705e6891f16f283 360 Pfam PF13416 Bacterial extracellular solute-binding protein 53 326 2.0E-40 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PANTHER PTHR30222:SF10 31 357 3.2E-145 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 SUPERFAMILY SSF53850 37 357 3.3E-87 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 Gene3D G3DSA:3.40.190.10 147 281 2.0E-24 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 Gene3D G3DSA:3.40.190.10 36 144 8.8E-53 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 Gene3D G3DSA:3.40.190.10 282 327 8.8E-53 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PIRSF PIRSF019574 1 360 7.2E-114 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PANTHER PTHR30222 31 357 3.2E-145 T 21-04-2016 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 161 175 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 135 151 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 102 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 104 117 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 59 80 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 59 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS01895 adbaa58343587b234705e6891f16f283 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 5.5E-104 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PANTHER PTHR10366 2 337 8.0E-144 T 21-04-2016 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 1.5E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 Gene3D G3DSA:3.40.50.720 1 179 1.8E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 8.1E-5 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 8.1E-5 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 8.1E-5 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 8.1E-5 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 2.1E-132 T 21-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 PANTHER PTHR10366:SF39 2 337 8.0E-144 T 21-04-2016 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 SUPERFAMILY SSF51735 1 337 3.92E-92 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 Gene3D G3DSA:3.90.25.10 180 232 1.1E-50 T 21-04-2016 APL_RS06825 535fbf6d8331628dad1d2c4d4ea08a15 338 Gene3D G3DSA:3.90.25.10 264 337 1.1E-50 T 21-04-2016 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 486 1.5E-212 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 13 536 55.285 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 PANTHER PTHR30031:SF0 4 536 0.0 T 21-04-2016 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 261 276 - T 21-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 SUPERFAMILY SSF68923 6 223 3.31E-88 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 PIRSF PIRSF006294 2 536 1.3E-232 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 Gene3D G3DSA:3.90.228.20 224 286 5.1E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 Gene3D G3DSA:3.90.228.20 347 535 5.1E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 Gene3D G3DSA:3.40.449.10 19 223 1.5E-87 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 PANTHER PTHR30031 4 536 0.0 T 21-04-2016 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 5 536 8.4E-284 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APL_RS04190 98dd14e8deba9ac5138be053b05383da 536 SUPERFAMILY SSF53795 225 536 6.41E-130 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 PANTHER PTHR21262:SF5 1 735 0.0 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 PANTHER PTHR21262 1 735 0.0 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Pfam PF04607 Region found in RelA / SpoT proteins 245 354 1.5E-38 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Gene3D G3DSA:3.10.20.30 399 461 1.1E-25 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Pfam PF02824 TGS domain 399 458 1.1E-21 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Gene3D G3DSA:3.30.70.260 656 731 1.3E-22 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 SMART SM00954 245 355 2.0E-68 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Pfam PF13291 ACT domain 655 732 4.2E-15 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 SUPERFAMILY SSF109604 16 201 1.51E-47 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 61 732 5.8E-181 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Pfam PF13328 HD domain 36 185 3.9E-37 T 21-04-2016 IPR003607 HD/PDEase domain APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 SUPERFAMILY SSF55021 658 733 4.2E-12 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 SUPERFAMILY SSF81301 190 403 6.05E-62 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 Gene3D G3DSA:3.30.460.10 188 335 4.4E-48 T 21-04-2016 APL_RS02080 3daa1b98337f65c8e4a9e84d15235dda 735 SUPERFAMILY SSF81271 393 458 1.29E-21 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF81767 227 368 4.58E-40 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Gene3D G3DSA:3.40.50.300 369 416 3.2E-121 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Gene3D G3DSA:3.40.50.300 2 228 3.2E-121 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Gene3D G3DSA:3.40.50.300 417 619 2.1E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PANTHER PTHR30612 1 520 0.0 T 21-04-2016 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PANTHER PTHR30612 550 903 0.0 T 21-04-2016 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Gene3D G3DSA:1.10.3060.10 648 830 1.1E-60 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF52540 417 617 2.95E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Pfam PF07517 SecA DEAD-like domain 7 402 1.6E-128 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Pfam PF02810 SEC-C motif 882 899 1.7E-10 T 21-04-2016 IPR004027 SEC-C motif APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Gene3D G3DSA:3.90.1440.10 230 367 3.0E-42 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 413 426 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 63 87 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 101 115 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 170 190 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 376 393 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 117 127 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 PRINTS PR00906 SecA protein signature 339 361 2.348335E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF52540 368 415 6.46E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF52540 5 228 6.46E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SMART SM00957 6 402 7.1E-296 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Pfam PF01043 SecA preprotein cross-linking domain 233 358 1.3E-35 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SMART SM00958 228 358 5.6E-76 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 ProSitePatterns PS01312 SecA family signature. 500 515 - T 21-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.267 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF81886 878 890 1.05E-80 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 SUPERFAMILY SSF81886 620 840 1.05E-80 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APL_RS01225 0c52bf09390d1c52e9b4659c8ab27c33 905 Pfam PF07516 SecA Wing and Scaffold domain 618 829 3.2E-65 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APL_RS07075 d8d11a545f2800b7e298934e6183fa88 312 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 7 308 9.9E-126 T 21-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APL_RS07075 d8d11a545f2800b7e298934e6183fa88 312 Pfam PF02687 FtsX-like permease family 189 303 2.5E-11 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APL_RS07075 d8d11a545f2800b7e298934e6183fa88 312 PIRSF PIRSF003097 7 306 2.6E-74 T 21-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 SUPERFAMILY SSF53927 221 529 1.3E-130 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Gene3D G3DSA:3.40.140.20 253 372 3.8E-50 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 SMART SM00851 15 128 6.6E-61 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 PANTHER PTHR11692 211 529 0.0 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 PANTHER PTHR11692 1 193 0.0 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 529 2.3E-261 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 SUPERFAMILY SSF52335 4 193 1.83E-71 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Pfam PF02142 MGS-like domain 15 128 1.8E-29 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 PIRSF PIRSF000414 1 529 4.5E-228 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Gene3D G3DSA:3.40.140.20 377 519 1.2E-61 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 460 5.5E-121 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Gene3D G3DSA:3.40.50.1380 2 186 1.9E-86 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 529 45.419 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS05010 d53699aef63138c8943cf19b306e6c1a 529 SMART SM00798 133 461 5.1E-217 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APL_RS00415 e378e2ba949860233f7d184783a8aebc 150 PANTHER PTHR30625 1 143 3.7E-29 T 21-04-2016 APL_RS00415 e378e2ba949860233f7d184783a8aebc 150 Pfam PF01618 MotA/TolQ/ExbB proton channel family 53 141 8.6E-27 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APL_RS00415 e378e2ba949860233f7d184783a8aebc 150 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 6 143 1.6E-58 T 21-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 APL_RS08365 6a1d69d7df990b24cc236bfd7099099a 180 Pfam PF06821 Serine hydrolase 5 175 2.2E-22 T 21-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- APL_RS08365 6a1d69d7df990b24cc236bfd7099099a 180 PANTHER PTHR15394 1 179 8.0E-31 T 21-04-2016 APL_RS08365 6a1d69d7df990b24cc236bfd7099099a 180 Gene3D G3DSA:3.40.50.1820 1 179 1.3E-60 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS08365 6a1d69d7df990b24cc236bfd7099099a 180 PANTHER PTHR15394:SF2 1 179 8.0E-31 T 21-04-2016 APL_RS08365 6a1d69d7df990b24cc236bfd7099099a 180 SUPERFAMILY SSF53474 2 175 2.2E-31 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 PIRSF PIRSF000077 1 105 2.0E-45 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 Gene3D G3DSA:3.40.30.10 3 104 1.3E-41 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 PANTHER PTHR10438 1 105 7.4E-44 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 PRINTS PR00421 Thioredoxin family signature 21 29 7.2E-10 T 21-04-2016 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 PRINTS PR00421 Thioredoxin family signature 29 38 7.2E-10 T 21-04-2016 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 PRINTS PR00421 Thioredoxin family signature 69 80 7.2E-10 T 21-04-2016 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 104 7.5E-41 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 SUPERFAMILY SSF52833 4 105 3.13E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05625 bd370c3f1c1175ee0be31c6d9ee1a9da 105 Pfam PF00085 Thioredoxin 3 103 1.5E-34 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 APL_RS04150 969b98d4d8fecd494896332080211318 255 SUPERFAMILY SSF142906 10 130 1.44E-31 T 21-04-2016 APL_RS04150 969b98d4d8fecd494896332080211318 255 PANTHER PTHR35145 10 136 4.9E-33 T 21-04-2016 APL_RS04150 969b98d4d8fecd494896332080211318 255 PANTHER PTHR35145:SF1 10 136 4.9E-33 T 21-04-2016 APL_RS04150 969b98d4d8fecd494896332080211318 255 Pfam PF04237 YjbR 17 121 3.2E-14 T 21-04-2016 IPR007351 Uncharacterised protein YjbR APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 17 340 36.947 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 Pfam PF06463 Molybdenum Cofactor Synthesis C 197 323 3.0E-39 T 21-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 PANTHER PTHR22960 17 296 4.1E-119 T 21-04-2016 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 Pfam PF04055 Radical SAM superfamily 31 192 4.6E-26 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 Pfam PF13353 4Fe-4S single cluster domain 35 136 1.5E-9 T 21-04-2016 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 17 340 1.3E-103 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 32 43 - T 21-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 Gene3D G3DSA:3.20.20.70 16 314 7.3E-69 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 SMART SM00729 26 231 2.4E-4 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS03600 f0fb3faab1a1859a51a2bfaf51997341 340 SUPERFAMILY SSF102114 17 296 9.55E-68 T 21-04-2016 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 SUPERFAMILY SSF48150 3 183 1.84E-78 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 PANTHER PTHR30037:SF4 1 185 7.0E-110 T 21-04-2016 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 182 9.6E-81 T 21-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 Pfam PF03352 Methyladenine glycosylase 7 182 2.7E-76 T 21-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 Gene3D G3DSA:1.10.340.30 3 183 2.6E-82 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS10255 e8bb36f800196b5db3e517da652edae4 187 PANTHER PTHR30037 1 185 7.0E-110 T 21-04-2016 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 PANTHER PTHR30133 1 223 4.8E-124 T 21-04-2016 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 110 1.1E-15 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 216 7.3E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 Gene3D G3DSA:1.10.3720.10 6 216 8.6E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 SUPERFAMILY SSF161098 7 201 1.09E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07115 69d97fc1fbef38a150ed7f9a0166aa45 223 PANTHER PTHR30133:SF2 1 223 4.8E-124 T 21-04-2016 APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 55 5.4E-11 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 1.1E-20 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 Gene3D G3DSA:3.40.1620.10 1 51 2.1E-5 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 SUPERFAMILY SSF143120 1 81 3.53E-25 T 21-04-2016 APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 PANTHER PTHR33713 1 83 3.7E-26 T 21-04-2016 APL_RS06680 4e85ed64f15096844a33b3e10af21982 83 PANTHER PTHR33713:SF6 1 83 3.7E-26 T 21-04-2016 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 21-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 1.2E-79 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 1.2E-146 T 21-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.586 T 21-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 PANTHER PTHR11941:SF20 9 278 3.7E-194 T 21-04-2016 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 Gene3D G3DSA:3.90.226.10 22 222 7.7E-71 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 PANTHER PTHR11941 9 278 3.7E-194 T 21-04-2016 APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 SUPERFAMILY SSF52096 13 280 3.7E-80 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS09695 7f7103dfcfbf965b66efae62ace14ec7 285 Gene3D G3DSA:1.10.12.10 223 273 1.4E-30 T 21-04-2016 IPR014748 Crontonase, C-terminal APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Pfam PF11808 Domain of unknown function (DUF3329) 10 90 3.5E-8 T 21-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SMART SM00388 203 268 4.2E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SMART SM00091 98 165 4.7E-5 T 21-04-2016 IPR000014 PAS domain APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 6.3E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 6.3E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 6.3E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 6.3E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PANTHER PTHR24423:SF554 57 419 3.5E-113 T 21-04-2016 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Pfam PF00989 PAS fold 102 180 6.7E-6 T 21-04-2016 IPR013767 PAS fold GO:0006355 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SUPERFAMILY SSF47384 190 267 4.71E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Gene3D G3DSA:3.30.450.20 99 194 3.2E-6 T 21-04-2016 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 267 1.0E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Gene3D G3DSA:3.30.565.10 255 421 1.9E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SMART SM00387 311 423 3.5E-34 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 419 6.1E-121 T 21-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 421 1.3E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 PANTHER PTHR24423 57 419 3.5E-113 T 21-04-2016 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SUPERFAMILY SSF55874 263 421 7.33E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 Gene3D G3DSA:1.10.287.130 195 254 1.9E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS06555 7c1ca9f9f766e0066790d5541dd4f93b 430 SUPERFAMILY SSF55785 97 195 1.27E-7 T 21-04-2016 IPR000014 PAS domain APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 9.7E-66 T 21-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 2.0E-24 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 Gene3D G3DSA:3.10.180.10 1 128 9.6E-47 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 PANTHER PTHR10374:SF20 2 131 6.1E-60 T 21-04-2016 APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 SUPERFAMILY SSF54593 1 128 2.28E-35 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS00930 17c40d746b45af332be1a8ccd835af15 135 PANTHER PTHR10374 2 131 6.1E-60 T 21-04-2016 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Pfam PF00708 Acylphosphatase 9 88 1.5E-18 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 PANTHER PTHR10029 9 758 0.0 T 21-04-2016 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 PANTHER PTHR10029:SF4 9 758 0.0 T 21-04-2016 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Pfam PF07503 HypF finger 115 148 6.2E-17 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Pfam PF07503 HypF finger 166 195 1.1E-13 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Gene3D G3DSA:3.90.870.10 208 378 7.3E-40 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 PIRSF PIRSF006256 4 761 1.4E-273 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 SUPERFAMILY SSF53067 663 759 7.56E-5 T 21-04-2016 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 ProSitePatterns PS01016 Glycoprotease family signature. 476 496 - T 21-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 SUPERFAMILY SSF54975 7 98 7.2E-20 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Gene3D G3DSA:3.30.70.100 7 97 1.3E-23 T 21-04-2016 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 758 1.5E-259 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 SUPERFAMILY SSF55821 182 393 7.63E-45 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS06975 22369f4346e1239edfb55cf84f1ce529 761 Pfam PF01300 Telomere recombination 217 388 3.7E-49 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.2E-22 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 Gene3D G3DSA:3.30.1550.10 2 72 6.2E-38 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 SUPERFAMILY SSF46906 68 141 3.01E-25 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 Gene3D G3DSA:1.10.10.250 73 141 3.4E-29 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 SUPERFAMILY SSF54747 3 73 5.36E-30 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 SMART SM00649 9 141 5.5E-81 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 PANTHER PTHR11661 1 141 4.0E-70 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.9E-64 T 21-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.9E-30 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal APL_RS09115 19b4fe024f2db1208a0a64e520333d89 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-17 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 5.5E-23 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 SUPERFAMILY SSF56553 53 178 6.67E-41 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 PANTHER PTHR32108 1 329 1.1E-153 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 2.7E-24 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.592 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Gene3D G3DSA:3.30.1360.10 10 60 1.6E-10 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 SMART SM00662 23 234 2.7E-106 T 21-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Gene3D G3DSA:1.10.150.20 244 328 1.9E-36 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 9.0E-35 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 9.1E-23 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 Gene3D G3DSA:2.170.120.12 61 177 1.2E-38 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 PANTHER PTHR32108:SF0 1 329 1.1E-153 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 6.7E-111 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 SUPERFAMILY SSF47789 251 325 7.46E-25 T 21-04-2016 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 SUPERFAMILY SSF55257 179 233 5.0E-31 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09485 4e68fda7d4ed0cf76a2d3359da95cf0a 329 SUPERFAMILY SSF55257 7 53 5.0E-31 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 Gene3D G3DSA:3.30.1330.10 1 138 2.3E-41 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 4.1E-21 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 PANTHER PTHR30270 1 320 8.0E-124 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 PANTHER PTHR30270:SF0 1 320 8.0E-124 T 21-04-2016 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 Gene3D G3DSA:3.90.650.10 142 319 3.5E-51 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 319 6.7E-111 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 296 1.3E-11 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 PIRSF PIRSF005303 1 319 2.1E-89 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 316 31.152 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 SUPERFAMILY SSF56042 141 304 4.78E-38 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01035 212f778889883ebf22d3450c1dad5bd4 321 SUPERFAMILY SSF55326 2 135 4.36E-31 T 21-04-2016 APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 138 6.0E-38 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 SUPERFAMILY SSF52540 38 147 1.27E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 148 3.8E-46 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 Gene3D G3DSA:3.40.50.300 6 159 5.6E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 PANTHER PTHR33540 5 163 1.0E-41 T 21-04-2016 APL_RS05915 e2fc8b1ca719c32ecc499386768244a0 163 PANTHER PTHR33540:SF2 5 163 1.0E-41 T 21-04-2016 APL_RS09600 d5334f17ef6f7de06204cd040c137381 263 PANTHER PTHR22916 1 205 6.4E-36 T 21-04-2016 APL_RS09600 d5334f17ef6f7de06204cd040c137381 263 SUPERFAMILY SSF53448 1 206 5.81E-39 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS09600 d5334f17ef6f7de06204cd040c137381 263 Gene3D G3DSA:3.90.550.10 2 203 3.6E-31 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS09600 d5334f17ef6f7de06204cd040c137381 263 Pfam PF00535 Glycosyl transferase family 2 3 128 5.3E-25 T 21-04-2016 IPR001173 Glycosyltransferase 2-like APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.971 T 21-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 PANTHER PTHR36204 2 229 8.6E-110 T 21-04-2016 APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 SUPERFAMILY SSF51366 13 222 1.33E-53 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 PANTHER PTHR36204:SF1 2 229 8.6E-110 T 21-04-2016 APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 2.4E-90 T 21-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APL_RS09320 31ee2d5c07d568650246f21135b67f40 229 Gene3D G3DSA:3.20.20.70 2 226 2.5E-88 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 Pfam PF13635 Domain of unknown function (DUF4143) 221 383 6.9E-24 T 21-04-2016 IPR025420 Domain of unknown function DUF4143 APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 PANTHER PTHR33295 1 438 8.8E-165 T 21-04-2016 APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 Pfam PF13173 AAA domain 18 152 1.6E-28 T 21-04-2016 APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 Gene3D G3DSA:3.40.50.300 4 123 2.8E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 SUPERFAMILY SSF52540 3 213 4.56E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04125 dd6c48443fd9bfe61fdae2398269a135 442 PANTHER PTHR33295:SF7 1 438 8.8E-165 T 21-04-2016 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 PANTHER PTHR12815:SF11 3 793 3.9E-228 T 21-04-2016 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Pfam PF01103 Surface antigen 445 793 3.8E-94 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 PIRSF PIRSF006076 1 793 9.9E-231 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 793 23.953 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 PANTHER PTHR12815 3 793 3.9E-228 T 21-04-2016 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 20 793 3.2E-259 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Pfam PF07244 Surface antigen variable number repeat 344 418 3.8E-12 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Pfam PF07244 Surface antigen variable number repeat 90 168 1.1E-10 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Pfam PF07244 Surface antigen variable number repeat 262 341 8.4E-9 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 APL_RS02110 ca259a19303344e685cf0ef9465f39ec 793 Pfam PF07244 Surface antigen variable number repeat 172 259 1.9E-16 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 Pfam PF03466 LysR substrate binding domain 90 294 1.2E-37 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 PANTHER PTHR30126 1 312 2.1E-184 T 21-04-2016 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.7E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 Gene3D G3DSA:3.40.190.10 90 235 1.2E-36 T 21-04-2016 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 Gene3D G3DSA:1.10.10.10 1 81 2.5E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 SUPERFAMILY SSF53850 90 304 2.5E-38 T 21-04-2016 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 PANTHER PTHR30126:SF6 1 312 2.1E-184 T 21-04-2016 APL_RS00690 68d4d3f4f0584afed3fa5b0ba6d9e9f6 327 SUPERFAMILY SSF46785 1 113 4.73E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 PANTHER PTHR13767:SF2 2 303 4.0E-133 T 21-04-2016 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 303 2.3E-18 T 21-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.6E-59 T 21-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 SUPERFAMILY SSF88697 245 304 1.34E-11 T 21-04-2016 IPR015947 PUA-like domain APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 SUPERFAMILY SSF55120 11 242 1.7E-82 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 Gene3D G3DSA:2.30.130.10 245 304 9.4E-14 T 21-04-2016 IPR015947 PUA-like domain APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 218 1.5E-91 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 PANTHER PTHR13767 2 303 4.0E-133 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 1.3E-20 T 21-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APL_RS03355 6cfa00c9941a66b614d5d1bcbcdcee65 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 303 19.177 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS09745 28eda40ccfeedfc089fdeee7b97576bb 197 PANTHER PTHR36964 4 185 1.1E-26 T 21-04-2016 APL_RS09745 28eda40ccfeedfc089fdeee7b97576bb 197 Pfam PF01794 Ferric reductase like transmembrane component 45 157 1.7E-15 T 21-04-2016 IPR013130 Ferric reductase transmembrane component-like domain APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PRINTS PR00094 Adenylate kinase signature 4 17 4.9E-34 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PRINTS PR00094 Adenylate kinase signature 173 187 4.9E-34 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PRINTS PR00094 Adenylate kinase signature 156 171 4.9E-34 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PRINTS PR00094 Adenylate kinase signature 32 46 4.9E-34 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PRINTS PR00094 Adenylate kinase signature 81 97 4.9E-34 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 SUPERFAMILY SSF52540 1 212 1.41E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 PANTHER PTHR23359 1 213 6.4E-110 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.173 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 Pfam PF00406 Adenylate kinase 5 185 5.6E-59 T 21-04-2016 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.5E-75 T 21-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.3E-15 T 21-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APL_RS06810 51f760cca026ce15f7a159cda5493b79 214 Gene3D G3DSA:3.40.50.300 1 212 5.9E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PANTHER PTHR30330:SF3 1 455 3.1E-216 T 21-04-2016 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 445 4.8E-159 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 Pfam PF01235 Sodium:alanine symporter family 55 453 2.2E-144 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 353 375 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 185 203 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 414 434 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 308 326 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 213 232 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PRINTS PR00175 Sodium/alanine symporter signature 91 113 6.6E-56 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS05875 7184dbfc4340fe3586e668311eb10b02 455 PANTHER PTHR30330 1 455 3.1E-216 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 Gene3D G3DSA:1.10.10.10 7 92 3.0E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 SUPERFAMILY SSF53850 92 295 1.5E-37 T 21-04-2016 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 PANTHER PTHR30126 5 309 3.6E-151 T 21-04-2016 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 Pfam PF03466 LysR substrate binding domain 92 295 4.7E-38 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 Gene3D G3DSA:3.40.190.10 93 179 9.8E-13 T 21-04-2016 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 SUPERFAMILY SSF46785 4 116 4.95E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.0E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 PANTHER PTHR30126:SF25 5 309 3.6E-151 T 21-04-2016 APL_RS06055 ddf62456e3d739da10e54a4f50175c5e 309 Gene3D G3DSA:3.40.190.10 180 264 1.4E-14 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Gene3D G3DSA:3.40.50.80 99 233 5.3E-33 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 262 332 2.2E-11 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 SUPERFAMILY SSF54292 232 338 1.21E-21 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00406 Cytochrome B5 reductase signature 117 136 2.9E-8 T 21-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00406 Cytochrome B5 reductase signature 207 215 2.9E-8 T 21-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00406 Cytochrome B5 reductase signature 94 108 2.9E-8 T 21-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00406 Cytochrome B5 reductase signature 57 64 2.9E-8 T 21-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00406 Cytochrome B5 reductase signature 154 165 2.9E-8 T 21-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Gene3D G3DSA:2.40.30.10 13 98 1.3E-21 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 289 297 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Pfam PF00970 Oxidoreductase FAD-binding domain 38 106 4.1E-10 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PANTHER PTHR19370 1 259 1.2E-90 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Gene3D G3DSA:3.10.20.30 234 338 1.7E-20 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 SUPERFAMILY SSF63380 12 106 1.22E-22 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PANTHER PTHR19370:SF89 1 259 1.2E-90 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 SUPERFAMILY SSF52343 97 237 1.31E-31 T 21-04-2016 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 1.0E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 1.0E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 57 64 1.0E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS08220 d42991f2e7a8e547101ee8890ee61ef6 339 Pfam PF00175 Oxidoreductase NAD-binding domain 118 220 1.3E-14 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 SMART SM00859 5 104 2.0E-12 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 PANTHER PTHR32338 1 314 2.6E-93 T 21-04-2016 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 SUPERFAMILY SSF55347 115 287 1.8E-32 T 21-04-2016 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 306 50.113 T 21-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 SUPERFAMILY SSF51735 3 130 6.86E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 305 1.7E-106 T 21-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 PANTHER PTHR32338:SF9 1 314 2.6E-93 T 21-04-2016 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 Gene3D G3DSA:3.40.50.720 44 123 9.5E-16 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 Gene3D G3DSA:3.30.360.10 124 287 9.6E-34 T 21-04-2016 APL_RS01240 6f380ad9a7288fcb58534da47110fe0b 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 45 98 4.3E-7 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 SUPERFAMILY SSF53706 1 638 1.16E-232 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 21-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Gene3D G3DSA:2.40.40.20 607 803 8.3E-45 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 1 182 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 667 806 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 210 279 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 321 381 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 398 482 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615:SF126 578 646 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Gene3D G3DSA:3.40.50.740 321 471 2.3E-57 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Gene3D G3DSA:3.40.228.10 1 108 1.7E-74 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Gene3D G3DSA:3.40.228.10 152 259 1.7E-74 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Pfam PF00384 Molybdopterin oxidoreductase 2 379 1.2E-21 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 6.5E-16 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 1 182 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 667 806 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 210 279 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 321 381 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 398 482 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 PANTHER PTHR11615 578 646 5.7E-239 T 21-04-2016 APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 SUPERFAMILY SSF50692 674 803 2.28E-42 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS04660 33371bdc0c8c069af50c458cb2f62560 807 SUPERFAMILY SSF50692 617 647 2.28E-42 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 SMART SM00487 255 474 4.2E-9 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 SUPERFAMILY SSF52540 527 566 4.66E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 SUPERFAMILY SSF52540 602 667 4.66E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 SUPERFAMILY SSF52540 397 479 4.66E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 PANTHER PTHR30195 30 408 1.1E-260 T 21-04-2016 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 PANTHER PTHR30195 425 974 1.1E-260 T 21-04-2016 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 SUPERFAMILY SSF52540 221 485 5.6E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 Pfam PF11867 Domain of unknown function (DUF3387) 696 1041 1.4E-98 T 21-04-2016 IPR021810 Protein of unknown function DUF3387 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 PANTHER PTHR30195:SF15 30 408 1.1E-260 T 21-04-2016 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 PANTHER PTHR30195:SF15 425 974 1.1E-260 T 21-04-2016 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 5 697 1.2E-213 T 21-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 Gene3D G3DSA:3.40.50.300 275 460 3.0E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 202 1.8E-43 T 21-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APL_RS03325 23425b7b70e31e2c46e70eb68cbab8d4 1046 Pfam PF04851 Type III restriction enzyme, res subunit 270 447 1.8E-15 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 183 1.3E-74 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Gene3D G3DSA:3.30.63.10 40 86 2.3E-27 T 21-04-2016 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Hamap MF_00328 Guanylate kinase [gmk]. 1 186 37.882 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Gene3D G3DSA:3.40.50.300 19 39 4.7E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 SMART SM00072 2 186 2.4E-70 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 SUPERFAMILY SSF52540 3 189 9.06E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 21-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 PANTHER PTHR23117 1 200 3.6E-101 T 21-04-2016 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Gene3D G3DSA:3.40.50.300 3 18 4.5E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Gene3D G3DSA:3.40.50.300 87 204 4.5E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 PANTHER PTHR23117:SF13 1 200 3.6E-101 T 21-04-2016 APL_RS01330 e82a98f2ff330d48bd48d0acad09eba6 206 Pfam PF00625 Guanylate kinase 4 184 7.2E-61 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.40.270.10 794 821 1.1E-86 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.40.270.10 1061 1242 1.1E-86 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.40.50.100 715 793 1.6E-29 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 339 454 8.1E-18 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 5.8E-8 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 657 3.1E-22 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.40.50.150 829 938 4.8E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.40.50.150 1046 1060 4.8E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 1.8E-156 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856:SF20 1035 1129 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856:SF20 744 931 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856:SF20 340 726 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:3.90.1110.10 153 230 7.1E-66 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:3.90.1110.10 346 444 7.1E-66 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 6.0E-49 T 21-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 21-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856 1035 1129 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856 744 931 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856 5 231 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856 1182 1342 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 PANTHER PTHR20856 340 726 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:3.90.1100.10 20 151 5.0E-144 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:3.90.1100.10 660 714 5.0E-144 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:3.90.1100.10 445 592 5.0E-144 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.6E-29 T 21-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 SUPERFAMILY SSF64484 343 940 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 SUPERFAMILY SSF64484 1040 1340 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 SUPERFAMILY SSF64484 11 226 0.0 T 21-04-2016 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 8.0E-27 T 21-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Gene3D G3DSA:2.30.150.10 593 657 1.4E-25 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09175 acdc50e62425d9a3856a961e11fbaf44 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.303 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 SUPERFAMILY SSF54909 72 156 8.85E-22 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 Gene3D G3DSA:1.10.10.10 11 62 6.5E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 PANTHER PTHR30154 2 160 5.4E-95 T 21-04-2016 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 Gene3D G3DSA:3.30.70.920 63 158 9.3E-33 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 9.9E-20 T 21-04-2016 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 SMART SM00344 10 119 1.3E-48 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 6.9E-25 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 SUPERFAMILY SSF46785 9 68 3.24E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 PANTHER PTHR30154:SF0 2 160 5.4E-95 T 21-04-2016 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 5.9E-19 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 5.9E-19 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS03235 fa9792524b044e00e17dcd0e3d0fe889 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 5.9E-19 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS02585 6d90eff3539155e1dba080557453eb88 547 Gene3D G3DSA:3.40.50.300 1 317 9.9E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02585 6d90eff3539155e1dba080557453eb88 547 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 249 296 1.4E-11 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS02585 6d90eff3539155e1dba080557453eb88 547 SUPERFAMILY SSF52540 1 310 1.25E-20 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 Pfam PF03180 NLPA lipoprotein 36 272 2.7E-90 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 11 272 3.1E-106 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 Gene3D G3DSA:3.40.190.10 34 164 2.6E-46 T 21-04-2016 APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 PANTHER PTHR30429:SF1 1 272 2.6E-115 T 21-04-2016 APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 SUPERFAMILY SSF53850 35 272 1.63E-75 T 21-04-2016 APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 PIRSF PIRSF002854 1 272 6.3E-92 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04750 5d927ab2b8f33234c1578d5dcf912b5f 272 PANTHER PTHR30429 1 272 2.6E-115 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 SUPERFAMILY SSF55821 1 202 3.66E-63 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 PANTHER PTHR17490:SF7 1 204 2.1E-93 T 21-04-2016 APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 2.0E-74 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 Pfam PF01300 Telomere recombination 22 197 2.8E-45 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 Gene3D G3DSA:3.90.870.10 2 201 3.1E-62 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS06070 cbfa130f9ec12ee5017b200ab8b0c3b7 205 PANTHER PTHR17490 1 204 2.1E-93 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 SUPERFAMILY SSF55347 135 356 9.4E-79 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 PIRSF PIRSF000148 1 370 5.1E-71 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 368 4.8E-196 T 21-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 PANTHER PTHR10174:SF116 202 368 1.6E-155 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 PANTHER PTHR10174:SF116 104 180 1.6E-155 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 SMART SM00859 3 123 4.6E-26 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 Gene3D G3DSA:3.40.50.720 1 143 1.8E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 Gene3D G3DSA:3.30.360.10 144 352 5.8E-79 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 5.7E-24 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 PANTHER PTHR10174 202 368 1.6E-155 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 PANTHER PTHR10174 104 180 1.6E-155 T 21-04-2016 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 SUPERFAMILY SSF51735 1 148 4.87E-55 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 263 277 - T 21-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 355 1.2E-60 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS00025 f2e90bc57b7bc8b6326a8f88d401463d 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 369 34.21 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 SUPERFAMILY SSF82657 1 80 2.22E-22 T 21-04-2016 IPR002634 BolA protein APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 Pfam PF01722 BolA-like protein 15 72 3.5E-12 T 21-04-2016 IPR002634 BolA protein APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 PANTHER PTHR12735 19 83 2.2E-18 T 21-04-2016 APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 Gene3D G3DSA:3.30.300.90 1 80 2.7E-20 T 21-04-2016 IPR002634 BolA protein APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 PANTHER PTHR12735:SF24 19 83 2.2E-18 T 21-04-2016 APL_RS06755 9f0fa82c85953038765d2e389ccaaeaf 86 PIRSF PIRSF003113 1 85 3.3E-20 T 21-04-2016 IPR002634 BolA protein APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 SUPERFAMILY SSF56784 1 209 8.67E-50 T 21-04-2016 IPR023214 HAD-like domain APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 184 1.3E-13 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 PANTHER PTHR18901 3 210 8.7E-55 T 21-04-2016 APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 Gene3D G3DSA:1.10.150.240 16 82 1.8E-16 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 2.9E-30 T 21-04-2016 IPR023214 HAD-like domain APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 PANTHER PTHR18901:SF34 3 210 8.7E-55 T 21-04-2016 APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 Gene3D G3DSA:3.40.50.1000 88 210 2.5E-36 T 21-04-2016 IPR023214 HAD-like domain APL_RS06340 b2a7119b117909fee7ca5815fb2ee38d 216 Gene3D G3DSA:3.40.50.1000 2 15 2.5E-36 T 21-04-2016 IPR023214 HAD-like domain APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 9.6E-47 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 32.328 T 21-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 SUPERFAMILY SSF54211 6 131 2.01E-47 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 PANTHER PTHR21569 1 131 2.7E-72 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 21-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APL_RS03155 0696857940d3dfeee65db657a944f4c3 131 Gene3D G3DSA:3.30.230.10 6 131 2.8E-50 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 Gene3D G3DSA:3.30.450.90 96 221 5.9E-42 T 21-04-2016 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 PANTHER PTHR30258 27 464 3.7E-161 T 21-04-2016 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 SUPERFAMILY SSF160246 24 86 8.11E-8 T 21-04-2016 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 Pfam PF00437 Type II/IV secretion system protein 130 390 9.1E-82 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 SUPERFAMILY SSF52540 115 457 1.76E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 PANTHER PTHR30258:SF1 27 464 3.7E-161 T 21-04-2016 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 28 92 3.0E-9 T 21-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 318 332 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APL_RS04590 ac30180823e6215fe887f2f80751c1b6 464 Gene3D G3DSA:3.40.50.300 229 462 1.4E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 SUPERFAMILY SSF82114 184 317 1.31E-45 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 PIRSF PIRSF004491 1 320 5.6E-102 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 PANTHER PTHR22749:SF0 1 311 8.0E-123 T 21-04-2016 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 PANTHER PTHR22749 1 311 8.0E-123 T 21-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 Pfam PF01687 Riboflavin kinase 194 314 1.5E-35 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 SMART SM00904 193 316 1.6E-58 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 Gene3D G3DSA:2.40.30.30 190 317 1.1E-37 T 21-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 316 7.3E-103 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 Gene3D G3DSA:3.40.50.620 10 189 2.0E-63 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 Pfam PF06574 FAD synthetase 17 176 3.6E-52 T 21-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APL_RS00225 16d59eb6fd3a7b731e2f3bb6afafd46e 320 SUPERFAMILY SSF52374 19 185 7.95E-31 T 21-04-2016 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 SUPERFAMILY SSF69864 191 434 2.35E-79 T 21-04-2016 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 Pfam PF00764 Arginosuccinate synthase 17 395 2.3E-60 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 Gene3D G3DSA:1.10.287.400 378 440 1.6E-31 T 21-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 130 141 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 PANTHER PTHR11587 1 427 3.7E-172 T 21-04-2016 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 Gene3D G3DSA:3.40.50.620 5 175 2.5E-42 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 Hamap MF_00581 Argininosuccinate synthase [argG]. 2 441 68.845 T 21-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 TIGRFAM TIGR00032 argG: argininosuccinate synthase 14 420 2.1E-166 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 18 26 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 SUPERFAMILY SSF52402 6 188 2.96E-32 T 21-04-2016 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 Gene3D G3DSA:3.90.1260.10 176 373 4.5E-65 T 21-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS02165 9d5e4cb674bd2a38e2152f4b50d9f4c3 443 PANTHER PTHR11587:SF2 1 427 3.7E-172 T 21-04-2016 APL_RS04130 560c0456decac104139d547c1ab213b4 295 SUPERFAMILY SSF46785 1 84 1.57E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04130 560c0456decac104139d547c1ab213b4 295 Gene3D G3DSA:3.40.190.10 106 172 3.2E-20 T 21-04-2016 APL_RS04130 560c0456decac104139d547c1ab213b4 295 Gene3D G3DSA:1.10.10.10 1 81 7.3E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04130 560c0456decac104139d547c1ab213b4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.2E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS04130 560c0456decac104139d547c1ab213b4 295 Gene3D G3DSA:3.40.190.10 173 253 6.1E-12 T 21-04-2016 APL_RS04130 560c0456decac104139d547c1ab213b4 295 Pfam PF03466 LysR substrate binding domain 87 284 5.4E-34 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS04130 560c0456decac104139d547c1ab213b4 295 PANTHER PTHR30537 1 291 1.5E-63 T 21-04-2016 APL_RS04130 560c0456decac104139d547c1ab213b4 295 SUPERFAMILY SSF53850 87 288 6.38E-40 T 21-04-2016 APL_RS04130 560c0456decac104139d547c1ab213b4 295 PANTHER PTHR30537:SF5 1 291 1.5E-63 T 21-04-2016 APL_RS07670 079b30648551a92fa358e06564bd4004 219 SUPERFAMILY SSF100950 2 147 6.7E-46 T 21-04-2016 APL_RS07670 079b30648551a92fa358e06564bd4004 219 SUPERFAMILY SSF75445 129 199 3.27E-23 T 21-04-2016 APL_RS07670 079b30648551a92fa358e06564bd4004 219 PANTHER PTHR11934 1 219 3.7E-137 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS07670 079b30648551a92fa358e06564bd4004 219 Gene3D G3DSA:3.30.70.260 141 197 2.2E-28 T 21-04-2016 APL_RS07670 079b30648551a92fa358e06564bd4004 219 PANTHER PTHR11934:SF11 1 219 3.7E-137 T 21-04-2016 APL_RS07670 079b30648551a92fa358e06564bd4004 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 5.8E-67 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS07670 079b30648551a92fa358e06564bd4004 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 218 33.453 T 21-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS07670 079b30648551a92fa358e06564bd4004 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 214 1.5E-57 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS07670 079b30648551a92fa358e06564bd4004 219 Gene3D G3DSA:3.40.50.1360 5 140 8.7E-57 T 21-04-2016 APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 PANTHER PTHR23089:SF2 1 115 1.4E-48 T 21-04-2016 APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 21-04-2016 IPR019808 Histidine triad, conserved site APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 PRINTS PR00332 Histidine triad family signature 99 109 6.5E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 PRINTS PR00332 Histidine triad family signature 10 26 6.5E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 PRINTS PR00332 Histidine triad family signature 31 49 6.5E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 Pfam PF01230 HIT domain 16 112 1.1E-28 T 21-04-2016 IPR001310 Histidine triad (HIT) protein APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 Gene3D G3DSA:3.30.428.10 5 113 3.7E-35 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 SUPERFAMILY SSF54197 7 115 9.36E-34 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS00655 9422ed0904a49c43814d5caebb6bf576 121 PANTHER PTHR23089 1 115 1.4E-48 T 21-04-2016 IPR001310 Histidine triad (HIT) protein APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Pfam PF16193 AAA C-terminal domain 187 265 1.4E-21 T 21-04-2016 IPR032423 AAA ATPase, C-terminal domain APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 SUPERFAMILY SSF48019 250 432 9.64E-74 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 PANTHER PTHR13779:SF7 10 446 3.4E-201 T 21-04-2016 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 2.1E-67 T 21-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 PANTHER PTHR13779 10 446 3.4E-201 T 21-04-2016 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Gene3D G3DSA:1.10.3710.10 346 444 1.2E-35 T 21-04-2016 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 SUPERFAMILY SSF52540 10 228 2.77E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Gene3D G3DSA:3.40.50.300 10 152 5.5E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Gene3D G3DSA:1.20.272.10 247 345 3.7E-42 T 21-04-2016 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 SMART SM00382 48 164 2.0E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 143 3.7E-17 T 21-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APL_RS02255 40b37489e6e32bd5f452a86b81d71d78 446 Gene3D G3DSA:1.10.8.60 153 240 8.2E-9 T 21-04-2016 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 Pfam PF00696 Amino acid kinase family 26 260 1.5E-39 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 Gene3D G3DSA:3.40.1160.10 25 282 1.9E-83 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 PANTHER PTHR23342 21 283 1.6E-88 T 21-04-2016 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 258 2.0E-67 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 SUPERFAMILY SSF53633 6 283 3.67E-74 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 Hamap MF_00082_B Acetylglutamate kinase [argB]. 24 283 32.241 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 PRINTS PR00474 Glutamate 5-kinase family signature 181 208 6.2E-6 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 6.2E-6 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 PRINTS PR00474 Glutamate 5-kinase family signature 234 254 6.2E-6 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS01245 c1367e4676b4e2518ed5037ccff9f923 284 PIRSF PIRSF000728 11 284 9.0E-95 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 3 408 2.2E-233 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 3 399 54.452 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 Pfam PF00266 Aminotransferase class-V 7 372 1.6E-86 T 21-04-2016 IPR000192 Aminotransferase class V domain APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 SUPERFAMILY SSF53383 7 394 3.82E-114 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 Gene3D G3DSA:3.40.640.10 19 256 6.0E-97 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 PANTHER PTHR11601 6 408 2.1E-231 T 21-04-2016 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 PANTHER PTHR11601:SF45 6 408 2.1E-231 T 21-04-2016 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 Gene3D G3DSA:3.90.1150.10 257 379 9.5E-50 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS04865 f92bfde63342b5dd29e827c0e9c86cd6 408 PIRSF PIRSF005572 4 388 2.0E-133 T 21-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APL_RS07785 418726981fee72660380b4b877a0402c 396 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 396 2.3E-134 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 SMART SM00363 335 396 3.5E-4 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS07785 418726981fee72660380b4b877a0402c 396 Pfam PF00579 tRNA synthetases class I (W and Y) 31 318 2.9E-83 T 21-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 Pfam PF01479 S4 domain 337 378 6.3E-6 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS07785 418726981fee72660380b4b877a0402c 396 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 395 47.811 T 21-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 APL_RS07785 418726981fee72660380b4b877a0402c 396 SUPERFAMILY SSF52374 8 316 7.04E-99 T 21-04-2016 APL_RS07785 418726981fee72660380b4b877a0402c 396 Gene3D G3DSA:3.10.290.10 328 395 4.0E-24 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS07785 418726981fee72660380b4b877a0402c 396 Gene3D G3DSA:1.10.240.10 229 327 2.7E-37 T 21-04-2016 APL_RS07785 418726981fee72660380b4b877a0402c 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 9.5E-27 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 9.5E-27 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 201 9.5E-27 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 212 224 9.5E-27 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APL_RS07785 418726981fee72660380b4b877a0402c 396 PANTHER PTHR11766:SF1 5 396 3.8E-235 T 21-04-2016 APL_RS07785 418726981fee72660380b4b877a0402c 396 SUPERFAMILY SSF55174 298 395 2.65E-16 T 21-04-2016 APL_RS07785 418726981fee72660380b4b877a0402c 396 Gene3D G3DSA:3.40.50.620 12 228 5.3E-85 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS07785 418726981fee72660380b4b877a0402c 396 PANTHER PTHR11766 5 396 3.8E-235 T 21-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 Gene3D G3DSA:3.30.50.10 3 55 3.2E-25 T 21-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 PANTHER PTHR36150 1 59 1.3E-19 T 21-04-2016 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 SUPERFAMILY SSF57716 4 57 3.85E-21 T 21-04-2016 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 Pfam PF03884 Domain of unknown function (DUF329) 6 51 3.7E-25 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 PANTHER PTHR36150:SF1 1 59 1.3E-19 T 21-04-2016 APL_RS04570 b7436f8551694584aeb3cc5607c2ab91 62 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 59 17.935 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 11.645 T 21-04-2016 IPR022907 VapC family GO:0004540 APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 Gene3D G3DSA:3.40.50.1010 3 131 1.3E-35 T 21-04-2016 IPR029060 PIN domain-like APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 Pfam PF01850 PIN domain 4 124 2.8E-16 T 21-04-2016 IPR002716 PIN domain APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 SUPERFAMILY SSF88723 1 131 7.01E-38 T 21-04-2016 IPR029060 PIN domain-like APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 PANTHER PTHR33653:SF2 1 131 9.6E-50 T 21-04-2016 APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 PANTHER PTHR33653 1 131 9.6E-50 T 21-04-2016 APL_RS09195 4858dce21129c2f91ab67ef847d855eb 132 SMART SM00670 2 121 4.0E-4 T 21-04-2016 IPR002716 PIN domain APL_RS06625 7913a651ab8bc789e284b3f98d3ccb97 163 SMART SM00731 10 159 6.0E-56 T 21-04-2016 IPR006640 SprT-like APL_RS06625 7913a651ab8bc789e284b3f98d3ccb97 163 Pfam PF10263 SprT-like family 14 157 7.9E-29 T 21-04-2016 IPR006640 SprT-like APL_RS06625 7913a651ab8bc789e284b3f98d3ccb97 163 Hamap MF_00746 Protein SprT [sprT]. 6 159 40.832 T 21-04-2016 IPR023483 Uncharacterised protein family SprT APL_RS06625 7913a651ab8bc789e284b3f98d3ccb97 163 PANTHER PTHR38773 1 157 7.5E-73 T 21-04-2016 APL_RS08315 9cf3d9f46ffa7db4500830af9751ca0e 147 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 33 93 1.4E-9 T 21-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region APL_RS08315 9cf3d9f46ffa7db4500830af9751ca0e 147 SUPERFAMILY SSF63829 6 123 6.21E-21 T 21-04-2016 APL_RS08315 9cf3d9f46ffa7db4500830af9751ca0e 147 PANTHER PTHR10907 6 124 8.3E-23 T 21-04-2016 APL_RS08315 9cf3d9f46ffa7db4500830af9751ca0e 147 Gene3D G3DSA:2.120.10.30 27 124 1.7E-20 T 21-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APL_RS08315 9cf3d9f46ffa7db4500830af9751ca0e 147 PANTHER PTHR10907:SF47 6 124 8.3E-23 T 21-04-2016 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 SUPERFAMILY SSF52540 1 141 4.73E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 Gene3D G3DSA:3.30.60.20 142 191 9.8E-18 T 21-04-2016 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 Pfam PF00265 Thymidine kinase 2 186 3.5E-63 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 SUPERFAMILY SSF57716 142 190 9.5E-16 T 21-04-2016 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.142 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 PANTHER PTHR11441 1 193 9.3E-80 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 PIRSF PIRSF035805 1 193 7.1E-61 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 21-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APL_RS03260 4bde9700a3786fc7a867e064b8f2ee52 193 Gene3D G3DSA:3.40.50.300 14 116 5.7E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 320 53.219 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 PANTHER PTHR10108:SF847 69 320 1.3E-129 T 21-04-2016 APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 319 3.4E-144 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 SUPERFAMILY SSF53335 89 316 1.12E-34 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 Gene3D G3DSA:3.40.50.150 109 310 1.7E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 PANTHER PTHR10108 69 320 1.3E-129 T 21-04-2016 APL_RS04260 c7848903e0578af14dd0a1ed6d3f7964 320 Pfam PF08003 Protein of unknown function (DUF1698) 7 319 8.6E-168 T 21-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 Gene3D G3DSA:3.20.20.70 4 256 2.2E-86 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 PANTHER PTHR21235 1 257 1.4E-115 T 21-04-2016 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 SUPERFAMILY SSF51366 1 256 4.0E-71 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.868 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 Pfam PF00977 Histidine biosynthesis protein 5 239 3.4E-76 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 6.9E-117 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APL_RS10740 4532b3e0970f9335254dc2f985cb02f9 257 PANTHER PTHR21235:SF2 1 257 1.4E-115 T 21-04-2016 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Gene3D G3DSA:4.10.950.10 196 271 8.5E-34 T 21-04-2016 IPR014726 Ribosomal protein L2, domain 3 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 7.1E-56 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 PIRSF PIRSF002158 12 273 1.3E-100 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.102 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Gene3D G3DSA:2.30.30.30 119 195 1.3E-34 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 SMART SM01383 42 118 3.8E-47 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 2.0E-130 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 SUPERFAMILY SSF50104 127 269 6.62E-60 T 21-04-2016 IPR008991 Translation protein SH3-like domain APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 21-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 4.4E-33 T 21-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 PANTHER PTHR13691 1 271 3.8E-145 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 SMART SM01382 124 251 1.3E-90 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 Gene3D G3DSA:2.40.50.140 1 114 3.2E-49 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS09375 001d14ab7f92a031cd6a90777eaf56e8 273 SUPERFAMILY SSF50249 2 125 3.77E-49 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS00865 8a6425c0737c01fdb2bdaf41f5d0cb48 214 PANTHER PTHR30506 12 214 2.2E-73 T 21-04-2016 APL_RS00865 8a6425c0737c01fdb2bdaf41f5d0cb48 214 Pfam PF03458 UPF0126 domain 107 180 1.2E-21 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 APL_RS00865 8a6425c0737c01fdb2bdaf41f5d0cb48 214 Pfam PF03458 UPF0126 domain 19 93 5.8E-24 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 APL_RS00865 8a6425c0737c01fdb2bdaf41f5d0cb48 214 PANTHER PTHR30506:SF3 12 214 2.2E-73 T 21-04-2016 APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 Pfam PF02576 Putative ribosome maturation factor RimP 11 147 9.2E-50 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 PANTHER PTHR33867:SF1 1 152 6.4E-58 T 21-04-2016 APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 Gene3D G3DSA:3.30.300.70 3 80 5.9E-32 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.366 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 Gene3D G3DSA:2.30.30.180 88 148 6.5E-14 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 SUPERFAMILY SSF75420 3 83 3.4E-26 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 SUPERFAMILY SSF74942 84 152 2.75E-18 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APL_RS03335 7d55d4317aa9e8f8da10382da440072e 153 PANTHER PTHR33867 1 152 6.4E-58 T 21-04-2016 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 Gene3D G3DSA:3.40.640.10 17 258 8.1E-101 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 PIRSF PIRSF000525 1 362 7.2E-146 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 SUPERFAMILY SSF53383 1 360 1.38E-116 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 49.15 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 PANTHER PTHR21152:SF1 3 361 1.5E-173 T 21-04-2016 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 Pfam PF00266 Aminotransferase class-V 4 350 1.2E-68 T 21-04-2016 IPR000192 Aminotransferase class V domain APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 PANTHER PTHR21152 3 361 1.5E-173 T 21-04-2016 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 Gene3D G3DSA:3.90.1150.10 260 361 1.8E-40 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS03660 9f31a323fef3867856e5e5f466b05803 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 5.7E-159 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APL_RS04465 5feac268523f45e7bbb83361f95adb3e 382 SUPERFAMILY SSF51726 19 381 5.1E-74 T 21-04-2016 APL_RS04465 5feac268523f45e7bbb83361f95adb3e 382 PANTHER PTHR30519:SF3 15 381 1.1E-148 T 21-04-2016 APL_RS04465 5feac268523f45e7bbb83361f95adb3e 382 PANTHER PTHR30519 15 381 1.1E-148 T 21-04-2016 APL_RS04465 5feac268523f45e7bbb83361f95adb3e 382 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 21 355 1.9E-10 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS04465 5feac268523f45e7bbb83361f95adb3e 382 Gene3D G3DSA:3.20.20.210 13 382 2.2E-108 T 21-04-2016 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 1.9E-17 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 PANTHER PTHR12905 9 34 4.6E-91 T 21-04-2016 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 PANTHER PTHR12905 50 275 4.6E-91 T 21-04-2016 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 SUPERFAMILY SSF56300 15 273 2.44E-56 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS10300 40251195e9117d9c723e5ee51876c593 275 PANTHER PTHR12905:SF7 9 34 4.6E-91 T 21-04-2016 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 PANTHER PTHR12905:SF7 50 275 4.6E-91 T 21-04-2016 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 Gene3D G3DSA:3.60.21.10 14 261 3.9E-38 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS10300 40251195e9117d9c723e5ee51876c593 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 261 38.401 T 21-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 APL_RS10300 40251195e9117d9c723e5ee51876c593 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 2.0E-22 T 21-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 PANTHER PTHR12001 12 331 3.3E-112 T 21-04-2016 IPR017446 Polyprenyl synthetase-related APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 Pfam PF00348 Polyprenyl synthetase 36 267 2.3E-70 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 SUPERFAMILY SSF48576 8 331 3.84E-93 T 21-04-2016 IPR008949 Isoprenoid synthase domain APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 PANTHER PTHR12001:SF47 12 331 3.3E-112 T 21-04-2016 APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 Gene3D G3DSA:1.10.600.10 8 330 4.7E-95 T 21-04-2016 IPR008949 Isoprenoid synthase domain APL_RS10575 4d0d675c9a14a311a82a2739acd05fc5 331 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 SMART SM00937 21 131 8.6E-56 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 181 197 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 299 5.1E-151 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 Pfam PF00472 RF-1 domain 165 273 7.7E-41 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 Gene3D G3DSA:3.30.160.20 163 242 3.5E-38 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 SUPERFAMILY SSF75620 2 300 5.62E-127 T 21-04-2016 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 PANTHER PTHR11075 3 298 4.2E-148 T 21-04-2016 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 PANTHER PTHR11075:SF6 3 298 4.2E-148 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 Gene3D G3DSA:1.20.58.410 2 52 2.5E-11 T 21-04-2016 APL_RS01685 a38acb55d9a124aa788916c9a64fc625 301 Pfam PF03462 PCRF domain 2 155 4.4E-49 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 SMART SM00963 1 86 5.6E-35 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.2E-21 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Pfam PF02978 Signal peptide binding domain 329 427 2.6E-32 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.3E-75 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 SMART SM00382 99 276 4.1E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Gene3D G3DSA:1.10.260.30 329 432 8.6E-40 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.551 T 21-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 SUPERFAMILY SSF47446 328 430 1.96E-37 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 PANTHER PTHR11564:SF7 1 435 5.5E-272 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 SUPERFAMILY SSF52540 42 353 8.71E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 SMART SM00962 100 296 7.6E-119 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Gene3D G3DSA:3.40.50.300 94 297 2.5E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 PANTHER PTHR11564 1 435 5.5E-272 T 21-04-2016 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.1E-177 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 Gene3D G3DSA:1.20.120.140 2 88 1.7E-34 T 21-04-2016 APL_RS09270 add52043c929ed5a12bc057a98f4ba39 463 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APL_RS08100 9450eb254d5e8325d179e11dafc98e17 123 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 110 9.2E-22 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APL_RS08100 9450eb254d5e8325d179e11dafc98e17 123 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 115 17.57 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APL_RS08100 9450eb254d5e8325d179e11dafc98e17 123 PANTHER PTHR28259 1 115 9.8E-27 T 21-04-2016 APL_RS02105 abe2f88617e78b99d784882df3207925 268 PANTHER PTHR35089 146 233 5.5E-22 T 21-04-2016 APL_RS02105 abe2f88617e78b99d784882df3207925 268 PANTHER PTHR35089 98 124 5.5E-22 T 21-04-2016 APL_RS02105 abe2f88617e78b99d784882df3207925 268 PANTHER PTHR35089 2 65 5.5E-22 T 21-04-2016 APL_RS02105 abe2f88617e78b99d784882df3207925 268 SMART SM00935 11 227 2.7E-31 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APL_RS02105 abe2f88617e78b99d784882df3207925 268 Pfam PF03938 Outer membrane protein (OmpH-like) 114 226 8.8E-20 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APL_RS02105 abe2f88617e78b99d784882df3207925 268 Pfam PF03938 Outer membrane protein (OmpH-like) 11 108 7.0E-9 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APL_RS02105 abe2f88617e78b99d784882df3207925 268 SUPERFAMILY SSF111384 136 227 3.66E-17 T 21-04-2016 IPR024930 Skp domain APL_RS02105 abe2f88617e78b99d784882df3207925 268 SUPERFAMILY SSF111384 23 71 1.1E-5 T 21-04-2016 IPR024930 Skp domain APL_RS02105 abe2f88617e78b99d784882df3207925 268 Gene3D G3DSA:3.30.910.20 13 59 1.7E-16 T 21-04-2016 APL_RS02105 abe2f88617e78b99d784882df3207925 268 Gene3D G3DSA:3.30.910.20 150 227 1.7E-16 T 21-04-2016 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 Gene3D G3DSA:3.40.50.300 4 234 1.5E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 SUPERFAMILY SSF52540 3 236 1.49E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 SMART SM00382 28 213 8.2E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 Pfam PF00005 ABC transporter 19 166 5.7E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 PANTHER PTHR24220:SF497 5 238 9.4E-148 T 21-04-2016 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 PANTHER PTHR24220 5 238 9.4E-148 T 21-04-2016 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 5.1E-123 T 21-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APL_RS01735 bb8bf0e7e8f5955562f830669d26a8ab 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 8.3E-9 T 21-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 Gene3D G3DSA:3.30.1420.10 1 41 3.9E-9 T 21-04-2016 APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 Gene3D G3DSA:1.10.10.370 42 111 2.0E-37 T 21-04-2016 APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 PANTHER PTHR37010 1 111 1.7E-54 T 21-04-2016 APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 1.6E-48 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 PANTHER PTHR37010:SF1 1 111 1.7E-54 T 21-04-2016 APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 SUPERFAMILY SSF69721 1 111 1.44E-40 T 21-04-2016 IPR025526 DsrC-like domain APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 PIRSF PIRSF006223 4 111 8.7E-44 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APL_RS01415 19ff301ccb11bfa785b48565320f5cf0 111 Pfam PF04358 DsrC like protein 6 111 3.1E-44 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 7.8E-47 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 PANTHER PTHR22789:SF0 1 215 1.1E-90 T 21-04-2016 APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 SMART SM01007 8 182 1.5E-65 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 PANTHER PTHR22789 1 215 1.1E-90 T 21-04-2016 APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 Gene3D G3DSA:3.40.225.10 1 211 2.3E-67 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 56.083 T 21-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 APL_RS08955 7db58eaa9d3fbb625de140aa35033848 216 SUPERFAMILY SSF53639 1 211 2.16E-69 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PANTHER PTHR13789 1 392 5.3E-136 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PANTHER PTHR13789:SF5 1 392 5.3E-136 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 392 1.8E-125 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.11201E-19 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.11201E-19 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 7.11201E-19 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 7.11201E-19 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 Gene3D G3DSA:3.50.50.60 4 75 5.6E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 Gene3D G3DSA:3.50.50.60 107 169 5.6E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 Gene3D G3DSA:3.50.50.60 270 358 5.6E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 Pfam PF01494 FAD binding domain 4 322 3.2E-29 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 Gene3D G3DSA:3.30.9.10 170 237 1.3E-5 T 21-04-2016 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 SUPERFAMILY SSF51905 269 386 2.45E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01720 4c836a12942b54aca0e699e14910ae3e 393 SUPERFAMILY SSF51905 4 178 2.45E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 PIRSF PIRSF006092 1 158 2.4E-52 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 Gene3D G3DSA:3.10.50.30 80 157 9.3E-30 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 SUPERFAMILY SSF46557 3 78 9.42E-29 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 6.6E-28 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.48 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 4.4E-31 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 PANTHER PTHR30437 1 157 7.8E-72 T 21-04-2016 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 Gene3D G3DSA:1.10.287.180 1 75 1.1E-34 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 6.9E-59 T 21-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APL_RS04930 6f1c1960d1576408d3981e5a6a5e9826 158 SUPERFAMILY SSF54534 81 157 1.23E-23 T 21-04-2016 APL_RS09785 66ee7079384c8834320a9e8cdf99de05 160 Pfam PF04345 Chorismate lyase 21 155 1.7E-26 T 21-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 APL_RS09785 66ee7079384c8834320a9e8cdf99de05 160 PANTHER PTHR38683 2 159 2.2E-16 T 21-04-2016 APL_RS09785 66ee7079384c8834320a9e8cdf99de05 160 Gene3D G3DSA:3.40.1410.10 10 158 3.3E-39 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APL_RS09785 66ee7079384c8834320a9e8cdf99de05 160 SUPERFAMILY SSF64288 6 158 2.28E-38 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 PANTHER PTHR13847 1 404 1.5E-174 T 21-04-2016 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 Gene3D G3DSA:3.50.50.60 153 331 3.0E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 Gene3D G3DSA:3.50.50.60 13 78 3.0E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 13 487 1.5E-197 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 PANTHER PTHR13847:SF214 1 404 1.5E-174 T 21-04-2016 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 8 489 48.554 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 12 489 3.4E-219 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APL_RS07475 c20037c79b0dc65252cf29d123454f3b 491 SUPERFAMILY SSF51905 13 277 1.74E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01860 adb96084a777866a300c66653b277c07 128 Pfam PF01228 Glycine radical 14 109 5.6E-22 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APL_RS01860 adb96084a777866a300c66653b277c07 128 SUPERFAMILY SSF51998 66 127 9.61E-24 T 21-04-2016 APL_RS01860 adb96084a777866a300c66653b277c07 128 PANTHER PTHR30191 1 128 5.9E-92 T 21-04-2016 APL_RS01860 adb96084a777866a300c66653b277c07 128 PIRSF PIRSF000378 2 128 3.1E-57 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APL_RS01860 adb96084a777866a300c66653b277c07 128 PANTHER PTHR30191:SF5 1 128 5.9E-92 T 21-04-2016 APL_RS01860 adb96084a777866a300c66653b277c07 128 Gene3D G3DSA:3.20.70.20 60 127 1.4E-33 T 21-04-2016 APL_RS01860 adb96084a777866a300c66653b277c07 128 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 128 38.458 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APL_RS01860 adb96084a777866a300c66653b277c07 128 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 128 1.8E-70 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APL_RS01860 adb96084a777866a300c66653b277c07 128 ProSitePatterns PS00850 Glycine radical domain signature. 98 106 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APL_RS06820 6ed504c855e6c4b8f80f46809aadd620 426 Pfam PF07690 Major Facilitator Superfamily 69 324 2.1E-18 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS06820 6ed504c855e6c4b8f80f46809aadd620 426 Gene3D G3DSA:1.20.1250.20 19 206 1.4E-14 T 21-04-2016 APL_RS06820 6ed504c855e6c4b8f80f46809aadd620 426 Gene3D G3DSA:1.20.1250.20 237 425 3.2E-5 T 21-04-2016 APL_RS06820 6ed504c855e6c4b8f80f46809aadd620 426 SUPERFAMILY SSF103473 8 423 1.7E-30 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS06820 6ed504c855e6c4b8f80f46809aadd620 426 PANTHER PTHR12778 9 421 1.5E-91 T 21-04-2016 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 PRINTS PR00773 GrpE protein signature 93 108 3.7E-27 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 PRINTS PR00773 GrpE protein signature 65 81 3.7E-27 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 PRINTS PR00773 GrpE protein signature 177 196 3.7E-27 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 PRINTS PR00773 GrpE protein signature 150 165 3.7E-27 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 SUPERFAMILY SSF51064 143 197 1.05E-17 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 SUPERFAMILY SSF58014 57 142 4.18E-24 T 21-04-2016 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 Pfam PF01025 GrpE 30 197 3.6E-47 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 Hamap MF_01151 Protein GrpE [grpE]. 4 198 21.202 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 Gene3D G3DSA:2.30.22.10 142 197 2.9E-24 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APL_RS01890 daa3ccbdc4d7245cb22983cc625eaad0 198 Gene3D G3DSA:3.90.20.20 35 141 1.1E-27 T 21-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 Gene3D G3DSA:1.20.272.20 222 340 1.1E-43 T 21-04-2016 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 SUPERFAMILY SSF52540 1 208 2.23E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 Pfam PF06144 DNA polymerase III, delta subunit 21 189 1.8E-39 T 21-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 Gene3D G3DSA:3.40.50.300 1 139 2.8E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 Gene3D G3DSA:1.10.8.60 144 221 1.2E-32 T 21-04-2016 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 SUPERFAMILY SSF48019 211 338 5.27E-30 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 337 1.0E-27 T 21-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 PANTHER PTHR34388 1 336 2.1E-66 T 21-04-2016 APL_RS04565 7e64d24aadde2e0a3eb061a7cb7d92f5 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 338 5.8E-99 T 21-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APL_RS10145 42a175d98963f39721b648e24135386c 504 SMART SM00382 286 482 2.3E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS10145 42a175d98963f39721b648e24135386c 504 SMART SM00382 29 219 1.4E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS10145 42a175d98963f39721b648e24135386c 504 Pfam PF00005 ABC transporter 278 433 5.0E-19 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS10145 42a175d98963f39721b648e24135386c 504 Pfam PF00005 ABC transporter 20 171 8.5E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS10145 42a175d98963f39721b648e24135386c 504 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS10145 42a175d98963f39721b648e24135386c 504 SUPERFAMILY SSF52540 258 487 1.97E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10145 42a175d98963f39721b648e24135386c 504 Gene3D G3DSA:3.40.50.300 3 234 1.1E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10145 42a175d98963f39721b648e24135386c 504 PANTHER PTHR24220 6 387 1.0E-204 T 21-04-2016 APL_RS10145 42a175d98963f39721b648e24135386c 504 PANTHER PTHR24220:SF392 6 387 1.0E-204 T 21-04-2016 APL_RS10145 42a175d98963f39721b648e24135386c 504 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 3.1E-273 T 21-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 APL_RS10145 42a175d98963f39721b648e24135386c 504 SUPERFAMILY SSF52540 4 229 1.93E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10145 42a175d98963f39721b648e24135386c 504 Gene3D G3DSA:3.40.50.300 251 499 7.9E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03710 fb97dfba2ccf6539b4689c82f5c8a607 97 SUPERFAMILY SSF160191 2 93 5.49E-39 T 21-04-2016 APL_RS03710 fb97dfba2ccf6539b4689c82f5c8a607 97 Hamap MF_01866 Protein YcgL [ycgL]. 6 93 26.824 T 21-04-2016 IPR027354 YcgL domain APL_RS03710 fb97dfba2ccf6539b4689c82f5c8a607 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 8 87 2.0E-28 T 21-04-2016 IPR027354 YcgL domain APL_RS03710 fb97dfba2ccf6539b4689c82f5c8a607 97 Pfam PF05166 YcgL domain 8 80 2.4E-33 T 21-04-2016 IPR027354 YcgL domain APL_RS03710 fb97dfba2ccf6539b4689c82f5c8a607 97 PANTHER PTHR38109 7 91 2.3E-34 T 21-04-2016 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 PANTHER PTHR11264 4 225 1.1E-152 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 SMART SM00987 46 207 2.5E-40 T 21-04-2016 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 21-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 40.665 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 1.8E-26 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 210 1.2E-88 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 PANTHER PTHR11264:SF10 4 225 1.1E-152 T 21-04-2016 APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 Gene3D G3DSA:3.40.470.10 2 219 3.1E-100 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 SUPERFAMILY SSF52141 2 219 2.62E-95 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS01865 d1ff3498a570df79752499c01125f3cd 225 SMART SM00986 46 207 2.5E-40 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 SUPERFAMILY SSF50199 24 150 6.67E-34 T 21-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 Gene3D G3DSA:2.40.50.90 24 149 1.6E-28 T 21-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 Pfam PF00565 Staphylococcal nuclease homologue 51 145 6.0E-23 T 21-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 PANTHER PTHR12302:SF0 24 162 2.4E-40 T 21-04-2016 APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 PANTHER PTHR12302 24 162 2.4E-40 T 21-04-2016 APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 SMART SM00318 26 145 9.1E-30 T 21-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 ProSitePatterns PS01123 Thermonuclease family signature 1. 37 61 - T 21-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 APL_RS05870 592e05d65d0b7da47085d22f957a1ee7 232 ProSitePatterns PS01284 Thermonuclease family signature 2. 91 101 - T 21-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 PIRSF PIRSF004950 14 579 4.8E-190 T 21-04-2016 IPR012159 Inner membrane protein YejM APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 PANTHER PTHR10342:SF215 239 528 6.8E-39 T 21-04-2016 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 PANTHER PTHR10342:SF215 550 560 6.8E-39 T 21-04-2016 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 Pfam PF11893 Domain of unknown function (DUF3413) 15 258 1.5E-100 T 21-04-2016 IPR024588 Inner membrane protein YejM, N-terminal APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 SUPERFAMILY SSF53649 267 559 5.37E-34 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 PANTHER PTHR10342 239 528 6.8E-39 T 21-04-2016 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 PANTHER PTHR10342 550 560 6.8E-39 T 21-04-2016 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 Gene3D G3DSA:3.40.720.10 267 512 2.6E-18 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APL_RS03060 48aad20af3bd8ca4cd6a9eaa26807f29 579 Pfam PF00884 Sulfatase 406 493 1.3E-11 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 SUPERFAMILY SSF53927 14 168 1.17E-56 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 PANTHER PTHR11079 18 169 1.8E-50 T 21-04-2016 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 22 164 47.418 T 21-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 116 1.2E-29 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 Gene3D G3DSA:3.40.140.10 10 162 3.2E-59 T 21-04-2016 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APL_RS03015 9e4fdcb35f3b99a4d6396c6e308373d2 174 PANTHER PTHR11079:SF72 18 169 1.8E-50 T 21-04-2016 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 Gene3D G3DSA:3.40.140.10 195 276 1.5E-15 T 21-04-2016 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 PANTHER PTHR11644 24 297 2.1E-114 T 21-04-2016 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 SUPERFAMILY SSF53927 9 155 3.76E-41 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 PIRSF PIRSF006334 20 297 2.5E-97 T 21-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 163 279 5.4E-37 T 21-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 SUPERFAMILY SSF53927 159 295 3.01E-33 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 PANTHER PTHR11644:SF15 24 297 2.1E-114 T 21-04-2016 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 67 149 8.2E-14 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 Gene3D G3DSA:3.40.140.10 38 183 1.7E-43 T 21-04-2016 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 Hamap MF_01558 Cytidine deaminase [cdd]. 7 297 45.642 T 21-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APL_RS07070 4181993c68cdedd4dc5a662591a6797d 297 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 108 142 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APL_RS09850 a94019862427c981da2a103021c109c2 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.898 T 21-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 APL_RS09850 a94019862427c981da2a103021c109c2 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.3E-123 T 21-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APL_RS09850 a94019862427c981da2a103021c109c2 381 Gene3D G3DSA:3.20.20.70 5 376 8.3E-131 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS09850 a94019862427c981da2a103021c109c2 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 21-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 APL_RS09850 a94019862427c981da2a103021c109c2 381 SUPERFAMILY SSF51395 5 376 4.76E-95 T 21-04-2016 APL_RS09850 a94019862427c981da2a103021c109c2 381 PIRSF PIRSF000138 1 380 1.2E-120 T 21-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 APL_RS09850 a94019862427c981da2a103021c109c2 381 PANTHER PTHR10578:SF65 7 377 5.1E-155 T 21-04-2016 APL_RS09850 a94019862427c981da2a103021c109c2 381 PANTHER PTHR10578 7 377 5.1E-155 T 21-04-2016 APL_RS07235 529e23b92552a02ca824435a8c388f39 236 PANTHER PTHR30050 2 234 1.3E-88 T 21-04-2016 APL_RS07235 529e23b92552a02ca824435a8c388f39 236 Pfam PF00308 Bacterial dnaA protein 40 215 2.6E-17 T 21-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APL_RS07235 529e23b92552a02ca824435a8c388f39 236 Gene3D G3DSA:1.10.8.60 170 235 4.7E-28 T 21-04-2016 APL_RS07235 529e23b92552a02ca824435a8c388f39 236 SUPERFAMILY SSF52540 11 214 7.34E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07235 529e23b92552a02ca824435a8c388f39 236 PANTHER PTHR30050:SF5 2 234 1.3E-88 T 21-04-2016 APL_RS07235 529e23b92552a02ca824435a8c388f39 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 39 59 2.7E-5 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS07235 529e23b92552a02ca824435a8c388f39 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 134 161 2.7E-5 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APL_RS07235 529e23b92552a02ca824435a8c388f39 236 Gene3D G3DSA:3.40.50.300 2 166 1.2E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07235 529e23b92552a02ca824435a8c388f39 236 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 2 234 4.2E-78 T 21-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Pfam PF12626 Polymerase A arginine-rich C-terminus 377 496 2.2E-36 T 21-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 51 499 35.353 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Gene3D G3DSA:3.30.460.10 83 231 9.3E-49 T 21-04-2016 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 SUPERFAMILY SSF81891 231 441 2.09E-46 T 21-04-2016 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 74 500 1.5E-152 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Pfam PF01743 Poly A polymerase head domain 101 232 3.9E-37 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 PANTHER PTHR13734:SF47 78 368 2.4E-107 T 21-04-2016 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 SUPERFAMILY SSF81301 75 228 1.53E-38 T 21-04-2016 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Gene3D G3DSA:1.10.3090.10 232 468 2.0E-43 T 21-04-2016 APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 263 320 7.1E-19 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APL_RS00905 ae0157c6a21595345e8e54c1aeed695a 510 PANTHER PTHR13734 78 368 2.4E-107 T 21-04-2016 APL_RS03095 9fab730faafaee74f7f564cadb254a8d 206 SUPERFAMILY SSF142795 2 205 5.36E-91 T 21-04-2016 APL_RS03095 9fab730faafaee74f7f564cadb254a8d 206 Pfam PF08942 Domain of unknown function (DUF1919) 10 202 1.3E-89 T 21-04-2016 IPR015037 Protein of unknown function DUF1919 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 PANTHER PTHR19372:SF1 1 313 3.1E-147 T 21-04-2016 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 1 318 59.488 T 21-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 Gene3D G3DSA:3.90.420.10 62 317 5.9E-73 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 Pfam PF00174 Oxidoreductase molybdopterin binding domain 91 251 2.8E-28 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 SUPERFAMILY SSF56524 60 314 2.35E-93 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APL_RS09740 117f63e0653b0fbb96c4f145188461b1 318 PANTHER PTHR19372 1 313 3.1E-147 T 21-04-2016 APL_RS06365 036a5955f317691414246f4d96f6e2c8 149 SUPERFAMILY SSF46785 4 138 1.53E-39 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06365 036a5955f317691414246f4d96f6e2c8 149 Gene3D G3DSA:1.10.10.10 3 86 2.0E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06365 036a5955f317691414246f4d96f6e2c8 149 Pfam PF01475 Ferric uptake regulator family 12 133 2.1E-46 T 21-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APL_RS06365 036a5955f317691414246f4d96f6e2c8 149 PANTHER PTHR33202 3 138 1.3E-37 T 21-04-2016 APL_RS06545 65a17814265cb42e4d487f7ba80dc4fe 463 PANTHER PTHR10283 4 463 1.2E-136 T 21-04-2016 APL_RS06545 65a17814265cb42e4d487f7ba80dc4fe 463 PANTHER PTHR10283:SF82 4 463 1.2E-136 T 21-04-2016 APL_RS06545 65a17814265cb42e4d487f7ba80dc4fe 463 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 462 8.0E-129 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS06545 65a17814265cb42e4d487f7ba80dc4fe 463 Pfam PF00939 Sodium:sulfate symporter transmembrane region 35 463 2.0E-62 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS06545 65a17814265cb42e4d487f7ba80dc4fe 463 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 412 428 - T 21-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 PIRSF PIRSF002599 1 69 6.3E-23 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.7E-29 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.6E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.6E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.6E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 SUPERFAMILY SSF50249 3 68 4.8E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 PANTHER PTHR11544 1 66 6.2E-33 T 21-04-2016 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 Gene3D G3DSA:2.40.50.140 4 67 1.4E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 SMART SM00357 5 69 1.3E-28 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 APL_RS00615 fc4c61a873b3d625f53214b72342544f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 21-04-2016 IPR019844 Cold-shock conserved site APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 SUPERFAMILY SSF69075 333 434 3.4E-26 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 Gene3D G3DSA:3.40.50.720 198 374 5.2E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 PIRSF PIRSF000445 1 436 7.4E-143 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 SUPERFAMILY SSF51735 176 331 6.85E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 PANTHER PTHR21089:SF3 288 375 1.0E-114 T 21-04-2016 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 PANTHER PTHR21089:SF3 28 272 1.0E-114 T 21-04-2016 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 186 322 9.2E-44 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 SUPERFAMILY SSF69742 1 172 1.22E-42 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 170 5.1E-46 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 432 2.1E-127 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 PANTHER PTHR21089 288 375 1.0E-114 T 21-04-2016 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 PANTHER PTHR21089 28 272 1.0E-114 T 21-04-2016 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 336 430 5.1E-21 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 434 28.769 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS02075 3ea4e9d958c4c039672ebdbeefaf34e4 436 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 108 131 - T 21-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS00840 a55a8eea7d6a08f84c9dff070ee70903 592 PANTHER PTHR21075 29 571 2.1E-31 T 21-04-2016 APL_RS00840 a55a8eea7d6a08f84c9dff070ee70903 592 SUPERFAMILY SSF51998 52 573 3.97E-102 T 21-04-2016 APL_RS00840 a55a8eea7d6a08f84c9dff070ee70903 592 Gene3D G3DSA:3.20.70.20 68 573 8.2E-80 T 21-04-2016 APL_RS00840 a55a8eea7d6a08f84c9dff070ee70903 592 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 46 577 1.0E-110 T 21-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APL_RS00840 a55a8eea7d6a08f84c9dff070ee70903 592 TIGRFAM TIGR02827 RNR_anaer_Bdell: anaerobic ribonucleoside-triphosphate reductase 3 577 0.0 T 21-04-2016 IPR014192 Anaerobic ribonucleoside-triphosphate reductase class III APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 SUPERFAMILY SSF46604 88 131 1.44E-7 T 21-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 129 9.7E-38 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 PANTHER PTHR13822 1 139 4.7E-36 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 127 19.651 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 Gene3D G3DSA:2.60.15.10 4 91 8.4E-30 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 SUPERFAMILY SSF51344 4 86 1.31E-25 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 7.0E-29 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS08745 6782ae7d82a4e7a9555e7834ebad786e 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 3.0E-37 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 Gene3D G3DSA:3.40.1390.30 6 109 1.0E-36 T 21-04-2016 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 Gene3D G3DSA:3.40.1390.30 110 224 9.5E-30 T 21-04-2016 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 PANTHER PTHR13799 7 253 1.6E-78 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 256 9.5E-72 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 SUPERFAMILY SSF102705 5 256 8.63E-80 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APL_RS03275 b5b4b0d1acf56f094a2c2f670cb0d9dc 257 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 244 3.7E-58 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APL_RS06415 35b2dfa93bbd8565b74f86dc7444ffc0 220 Pfam PF10144 Bacterial virulence factor haemolysin 4 157 5.4E-59 T 21-04-2016 IPR019305 Uncharacterised protein family Smp APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 Gene3D G3DSA:3.20.20.210 3 385 1.5E-145 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 SUPERFAMILY SSF51726 392 753 3.14E-119 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 SUPERFAMILY SSF51726 5 389 1.83E-106 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 Gene3D G3DSA:3.20.20.210 388 756 9.7E-131 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 749 1.4E-158 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 PANTHER PTHR30519:SF0 1 757 0.0 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 754 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 307 2.0E-125 T 21-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 PANTHER PTHR30519 1 757 0.0 T 21-04-2016 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 PIRSF PIRSF000382 1 757 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS06045 5fbc8f534812196cefff8d682fa2293e 757 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 754 37.157 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.2E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.2E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.2E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 PIRSF PIRSF002144 1 91 6.8E-32 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 21-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 SUPERFAMILY SSF54570 3 84 1.83E-35 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.0E-46 T 21-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 PANTHER PTHR11880 1 91 1.3E-56 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 Pfam PF00203 Ribosomal protein S19 3 83 4.2E-37 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APL_RS09380 d63869c21e5a409ec218bd7dfc46ca4c 91 Gene3D G3DSA:3.30.860.10 1 90 3.8E-41 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 341 3.4E-43 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APL_RS00015 64b55625709498e0574ed27fe8457bab 360 SUPERFAMILY SSF52540 1 332 3.77E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00015 64b55625709498e0574ed27fe8457bab 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 357 1.2E-141 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 PANTHER PTHR32182 1 354 1.2E-59 T 21-04-2016 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 PANTHER PTHR32182:SF0 1 354 1.2E-59 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 94.225 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APL_RS00015 64b55625709498e0574ed27fe8457bab 360 Gene3D G3DSA:3.40.50.300 1 171 3.2E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00015 64b55625709498e0574ed27fe8457bab 360 Gene3D G3DSA:3.40.50.300 230 340 3.2E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00015 64b55625709498e0574ed27fe8457bab 360 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APL_RS07935 95d4745c7de6985a1e62c9fa1f6faf43 145 SUPERFAMILY SSF102400 1 144 3.66E-48 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APL_RS07935 95d4745c7de6985a1e62c9fa1f6faf43 145 Gene3D G3DSA:3.40.50.10110 1 144 7.0E-53 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APL_RS07935 95d4745c7de6985a1e62c9fa1f6faf43 145 PANTHER PTHR38767 2 143 4.7E-53 T 21-04-2016 APL_RS07935 95d4745c7de6985a1e62c9fa1f6faf43 145 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 140 2.6E-42 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 PANTHER PTHR13903:SF7 1 228 5.5E-94 T 21-04-2016 APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 Pfam PF02678 Pirin 8 119 1.4E-35 T 21-04-2016 IPR003829 Pirin, N-terminal domain APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 Gene3D G3DSA:2.60.120.10 4 228 8.3E-66 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 PIRSF PIRSF006232 1 227 2.6E-52 T 21-04-2016 IPR012093 Pirin APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 SUPERFAMILY SSF51182 1 228 1.88E-72 T 21-04-2016 IPR011051 RmlC-like cupin domain APL_RS07875 59fc82cc8dcbcefe7742e7f7039453d5 229 PANTHER PTHR13903 1 228 5.5E-94 T 21-04-2016 IPR012093 Pirin APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 4.6E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06550 6845af0f297506de1df9d539eecd8294 637 SMART SM00433 35 631 2.1E-221 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 539 561 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 1.2E-125 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 SUPERFAMILY SSF54211 218 383 1.1E-47 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Pfam PF01751 Toprim domain 414 523 1.2E-12 T 21-04-2016 IPR006171 Toprim domain APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 110 124 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 518 530 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 415 429 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 562 578 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 32 47 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 67 80 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 480 496 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 267 280 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PRINTS PR00418 DNA topoisomerase II family signature 498 515 3.1E-60 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 SMART SM00387 28 174 4.6E-21 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Pfam PF00204 DNA gyrase B 219 385 1.2E-40 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 SUPERFAMILY SSF56719 389 629 7.32E-80 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Gene3D G3DSA:3.40.50.670 399 600 9.6E-77 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PANTHER PTHR10169:SF45 1 635 0.0 T 21-04-2016 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 PANTHER PTHR10169 1 635 0.0 T 21-04-2016 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 632 0.0 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 SUPERFAMILY SSF55874 5 216 2.88E-65 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Gene3D G3DSA:3.30.230.10 217 391 5.0E-48 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Gene3D G3DSA:3.30.565.10 17 215 3.8E-74 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 627 5.1E-24 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS06550 6845af0f297506de1df9d539eecd8294 637 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 635 46.182 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 SMART SM00739 132 159 3.6E-7 T 21-04-2016 IPR005824 KOW APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 14 185 5.7E-70 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 SMART SM00738 11 120 4.2E-48 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 Pfam PF00467 KOW motif 135 167 5.1E-9 T 21-04-2016 IPR005824 KOW APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 Pfam PF02357 Transcription termination factor nusG 12 117 4.2E-26 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 SUPERFAMILY SSF82679 11 122 5.49E-39 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 SUPERFAMILY SSF50104 132 185 1.81E-19 T 21-04-2016 IPR008991 Translation protein SH3-like domain APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 11 186 24.278 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 PANTHER PTHR30265 1 185 6.1E-80 T 21-04-2016 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 Gene3D G3DSA:3.30.70.940 11 122 3.9E-42 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 ProSitePatterns PS01014 Transcription termination factor nusG signature. 169 178 - T 21-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 Gene3D G3DSA:2.30.30.30 125 185 6.1E-31 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 PRINTS PR00338 Transcription termination factor NUSG signature 144 159 4.9E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 PRINTS PR00338 Transcription termination factor NUSG signature 162 178 4.9E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APL_RS09110 38d543f03632cdf8b4b1c6b71d4d63fe 187 PRINTS PR00338 Transcription termination factor NUSG signature 66 78 4.9E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 SUPERFAMILY SSF52518 353 546 2.14E-62 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.2E-56 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Gene3D G3DSA:3.40.50.1220 183 334 9.8E-57 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 PANTHER PTHR18968 1 546 5.1E-253 T 21-04-2016 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 SUPERFAMILY SSF52518 1 172 8.25E-62 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 PANTHER PTHR18968:SF116 1 546 5.1E-253 T 21-04-2016 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 8.7E-42 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 413 432 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Gene3D G3DSA:3.40.50.970 335 539 2.7E-69 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 376 524 7.8E-44 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 SUPERFAMILY SSF52467 182 341 8.73E-57 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 547 1.4E-206 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00520 e802b4b40f69dcd513d6320623ca0c61 550 Gene3D G3DSA:3.40.50.970 1 172 3.9E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS02690 e8de8023c1e6b481eb15e0e85d207e5d 137 Pfam PF06141 Phage minor tail protein U 3 130 5.6E-52 T 21-04-2016 IPR009312 Minor tail protein U-like APL_RS02690 e8de8023c1e6b481eb15e0e85d207e5d 137 SUPERFAMILY SSF143749 3 131 1.1E-41 T 21-04-2016 IPR009312 Minor tail protein U-like APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 Gene3D G3DSA:3.40.50.10490 113 269 3.9E-41 T 21-04-2016 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 PANTHER PTHR30514 6 287 7.3E-96 T 21-04-2016 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 80 3.6E-23 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 Gene3D G3DSA:1.10.10.10 5 81 4.8E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 SUPERFAMILY SSF53697 99 270 4.06E-42 T 21-04-2016 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 Pfam PF01380 SIS domain 132 260 7.5E-24 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 SUPERFAMILY SSF46689 6 80 3.7E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS03680 b25359c43833e0c7d39a5023990cf42d 290 PANTHER PTHR30514:SF1 6 287 7.3E-96 T 21-04-2016 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 179 326 8.2E-43 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:3.40.50.300 242 328 2.5E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:3.40.50.300 3 109 2.5E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 101 9.8E-7 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 PANTHER PTHR11262 215 440 2.5E-208 T 21-04-2016 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 PANTHER PTHR11262 3 104 2.5E-208 T 21-04-2016 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 SUPERFAMILY SSF52540 3 438 2.26E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:1.10.8.10 110 169 5.2E-33 T 21-04-2016 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:1.10.8.10 210 240 5.2E-33 T 21-04-2016 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 SMART SM00382 48 329 3.7E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 SMART SM01086 332 426 1.9E-20 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:3.40.50.300 170 199 0.001 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 440 8.6E-222 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 440 42.53 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 332 400 7.2E-6 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 PANTHER PTHR11262:SF3 215 440 2.5E-208 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 PANTHER PTHR11262:SF3 3 104 2.5E-208 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APL_RS09215 5a4d756aa6c60d87602809e5fba134a1 440 Gene3D G3DSA:1.10.8.60 331 440 3.0E-35 T 21-04-2016 APL_RS01840 cebc45bbbe9858eb2acca95f89360710 189 PANTHER PTHR34227 1 187 1.5E-49 T 21-04-2016 APL_RS01840 cebc45bbbe9858eb2acca95f89360710 189 PANTHER PTHR34227:SF2 1 187 1.5E-49 T 21-04-2016 APL_RS01840 cebc45bbbe9858eb2acca95f89360710 189 PIRSF PIRSF004690 1 188 3.9E-50 T 21-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APL_RS01840 cebc45bbbe9858eb2acca95f89360710 189 Gene3D G3DSA:1.10.3480.10 2 183 2.5E-34 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS01840 cebc45bbbe9858eb2acca95f89360710 189 SUPERFAMILY SSF89155 4 182 1.29E-37 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 348 1.4E-182 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 PIRSF PIRSF000808 1 343 1.3E-121 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 SUPERFAMILY SSF54197 4 178 3.77E-72 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 21-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 PANTHER PTHR11943:SF2 1 349 4.6E-204 T 21-04-2016 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 348 1.4E-63 T 21-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 Gene3D G3DSA:3.30.428.10 47 176 1.7E-57 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 177 1.2E-70 T 21-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 SUPERFAMILY SSF54197 180 346 1.1E-53 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 Gene3D G3DSA:3.30.428.10 177 346 1.2E-71 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 APL_RS05205 f180ca171c48791aa2d1808f3d631ead 349 PANTHER PTHR11943 1 349 4.6E-204 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS09570 478faa79b23e35ec3bc7c4ce91a472f7 123 Pfam PF04480 Protein of unknown function (DUF559) 8 115 1.4E-41 T 21-04-2016 IPR007569 Domain of unknown function DUF559 APL_RS09570 478faa79b23e35ec3bc7c4ce91a472f7 123 SUPERFAMILY SSF52980 11 117 1.45E-15 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS09570 478faa79b23e35ec3bc7c4ce91a472f7 123 PANTHER PTHR38590:SF1 2 123 9.6E-52 T 21-04-2016 APL_RS09570 478faa79b23e35ec3bc7c4ce91a472f7 123 PANTHER PTHR38590 2 123 9.6E-52 T 21-04-2016 APL_RS10870 6391102b5cb7e800fb1b3b157956a4c5 214 Gene3D G3DSA:2.40.170.20 17 210 2.7E-31 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10870 6391102b5cb7e800fb1b3b157956a4c5 214 PANTHER PTHR32552 61 200 7.7E-14 T 21-04-2016 APL_RS10870 6391102b5cb7e800fb1b3b157956a4c5 214 Pfam PF00593 TonB dependent receptor 120 204 1.8E-9 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10870 6391102b5cb7e800fb1b3b157956a4c5 214 PANTHER PTHR32552:SF18 61 200 7.7E-14 T 21-04-2016 APL_RS10870 6391102b5cb7e800fb1b3b157956a4c5 214 SUPERFAMILY SSF56935 18 210 1.1E-24 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 3 804 0.0 T 21-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 PANTHER PTHR11615:SF128 1 311 0.0 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 PANTHER PTHR11615:SF128 343 804 0.0 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Pfam PF01568 Molydopterin dinucleotide binding domain 686 797 2.8E-27 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Gene3D G3DSA:2.20.25.90 44 110 5.3E-18 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 33 1.5E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 722 749 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Gene3D G3DSA:3.40.50.740 111 196 6.0E-77 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Gene3D G3DSA:3.40.50.740 403 645 6.0E-77 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 SUPERFAMILY SSF50692 632 804 2.71E-39 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Gene3D G3DSA:2.40.40.20 662 805 4.5E-56 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 SUPERFAMILY SSF53706 47 688 4.84E-174 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Gene3D G3DSA:3.40.228.10 197 402 1.2E-71 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 SMART SM00926 46 106 8.1E-12 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 PANTHER PTHR11615 1 311 0.0 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 PANTHER PTHR11615 343 804 0.0 T 21-04-2016 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 51 70 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Pfam PF00384 Molybdopterin oxidoreductase 109 567 7.8E-109 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APL_RS08890 9c8dc5d617087fb7ec92cb2d964bba90 805 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 106 3.5E-17 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 PANTHER PTHR30363:SF15 3 251 1.3E-117 T 21-04-2016 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.1E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.1E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 SUPERFAMILY SSF46785 7 65 2.64E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 Pfam PF00455 DeoR C terminal sensor domain 76 231 2.7E-39 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 SUPERFAMILY SSF100950 75 232 6.03E-28 T 21-04-2016 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 SMART SM00420 9 61 2.7E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 9.5E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 SMART SM01134 72 232 1.1E-50 T 21-04-2016 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 Gene3D G3DSA:1.10.10.10 7 82 3.9E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 Gene3D G3DSA:3.40.50.1360 83 215 7.4E-13 T 21-04-2016 APL_RS08655 f0b49261e15eadea55c9aa907ff9046b 252 PANTHER PTHR30363 3 251 1.3E-117 T 21-04-2016 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00473 Galactokinase signature 90 101 7.0E-28 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00473 Galactokinase signature 265 279 7.0E-28 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00473 Galactokinase signature 111 129 7.0E-28 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00473 Galactokinase signature 27 45 7.0E-28 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Pfam PF08544 GHMP kinases C terminal 280 363 1.2E-12 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Gene3D G3DSA:3.30.70.890 207 382 9.3E-59 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.6E-43 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00959 Mevalonate kinase family signature 330 347 5.6E-43 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00959 Mevalonate kinase family signature 118 140 5.6E-43 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PRINTS PR00959 Mevalonate kinase family signature 161 180 5.6E-43 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 SUPERFAMILY SSF54211 5 202 2.35E-61 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Pfam PF00288 GHMP kinases N terminal domain 113 180 2.0E-10 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 SUPERFAMILY SSF55060 203 383 5.94E-51 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 21-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Gene3D G3DSA:3.30.230.10 7 206 1.7E-72 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PIRSF PIRSF000530 1 384 4.2E-117 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PANTHER PTHR10457:SF6 7 380 5.9E-126 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 TIGRFAM TIGR00131 gal_kin: galactokinase 7 382 2.9E-146 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Pfam PF10509 Galactokinase galactose-binding signature 9 57 2.1E-20 T 21-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 PANTHER PTHR10457 7 380 5.9E-126 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS05210 12bd9a991f053b3b6f52cfdd3c079536 384 Hamap MF_00246 Galactokinase [galK]. 25 383 44.385 T 21-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.0E-75 T 21-04-2016 IPR013005 50S ribosomal protein uL4 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 1 200 33.468 T 21-04-2016 IPR013005 50S ribosomal protein uL4 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.1E-64 T 21-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 SUPERFAMILY SSF52166 9 199 8.11E-73 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 PANTHER PTHR10746 10 199 7.6E-91 T 21-04-2016 IPR013005 50S ribosomal protein uL4 APL_RS09365 719085c7fc95a5af8c30162836fac22a 200 Gene3D G3DSA:3.40.1370.10 52 200 4.8E-59 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 PANTHER PTHR11390:SF26 8 177 2.0E-66 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 PANTHER PTHR11390 8 177 2.0E-66 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 SUPERFAMILY SSF57783 12 48 7.31E-12 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 SUPERFAMILY SSF57783 57 90 5.27E-11 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 10 47 3.1E-16 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 100 137 1.7E-13 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 57 89 2.7E-14 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 140 171 1.9 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 SUPERFAMILY SSF57783 94 134 1.39E-6 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Gene3D G3DSA:3.30.65.10 13 48 8.7E-13 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Gene3D G3DSA:3.30.65.10 57 88 6.9E-12 T 21-04-2016 APL_RS05970 07472224f2d15bcc24250e0a4e0cbae4 177 Gene3D G3DSA:3.30.65.10 95 142 4.9E-8 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF81653 225 319 9.15E-20 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Pfam PF00403 Heavy-metal-associated domain 8 63 6.5E-14 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PANTHER PTHR24093 5 716 5.6E-259 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF55008 3 72 1.96E-19 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF81665 320 413 4.05E-16 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF81665 654 689 4.05E-16 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF81665 170 222 4.05E-16 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 184 716 5.4E-111 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Pfam PF00122 E1-E2 ATPase 189 410 1.4E-57 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Gene3D G3DSA:3.40.50.1000 392 434 2.3E-49 T 21-04-2016 IPR023214 HAD-like domain APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Gene3D G3DSA:3.40.50.1000 531 673 2.3E-49 T 21-04-2016 IPR023214 HAD-like domain APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Gene3D G3DSA:2.70.150.10 168 319 8.5E-24 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 ProSitePatterns PS01229 Hypothetical cof family signature 2. 605 627 - T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Gene3D G3DSA:3.40.1110.10 435 530 1.2E-9 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 640 1.7E-25 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 624 1.7E-25 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 1.7E-25 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 419 433 1.7E-25 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 269 283 1.7E-25 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 45 65 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 188 207 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 140 159 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 678 692 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 582 599 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 208 226 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PRINTS PR00943 Copper-transporting ATPase signature 342 356 1.0E-11 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 190 684 1.1E-84 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 136 714 4.0E-172 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Pfam PF00702 haloacid dehalogenase-like hydrolase 415 619 1.3E-43 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 421 427 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 155 714 3.2E-169 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF56784 474 711 1.53E-54 T 21-04-2016 IPR023214 HAD-like domain APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 SUPERFAMILY SSF56784 417 437 1.53E-54 T 21-04-2016 IPR023214 HAD-like domain APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 PANTHER PTHR24093:SF319 5 716 5.6E-259 T 21-04-2016 APL_RS06600 124413761dd8cc41ea9f7fef505e7b69 716 Gene3D G3DSA:3.30.70.100 3 67 2.8E-23 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 Gene3D G3DSA:3.30.390.30 332 456 2.7E-45 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-27 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.5E-27 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.5E-27 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 1.5E-27 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.5E-27 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 456 4.9E-209 T 21-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 SUPERFAMILY SSF55424 342 456 1.22E-37 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 455 1.1E-36 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.7E-66 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 PIRSF PIRSF000350 1 452 8.5E-90 T 21-04-2016 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 Gene3D G3DSA:3.50.50.60 144 331 1.7E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 SUPERFAMILY SSF51905 3 377 1.32E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 324 7.0E-64 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06490 8bfe1481733aaca4c28b5d2c3b151615 456 Gene3D G3DSA:3.50.50.60 2 143 9.4E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01450 55c878b18735487b861e1abc4c146339 371 PANTHER PTHR24220 11 301 4.2E-158 T 21-04-2016 APL_RS01450 55c878b18735487b861e1abc4c146339 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 366 6.3E-162 T 21-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APL_RS01450 55c878b18735487b861e1abc4c146339 371 Pfam PF08402 TOBE domain 285 366 2.8E-7 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APL_RS01450 55c878b18735487b861e1abc4c146339 371 SUPERFAMILY SSF50331 242 367 9.64E-9 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APL_RS01450 55c878b18735487b861e1abc4c146339 371 SUPERFAMILY SSF52540 9 249 1.73E-88 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01450 55c878b18735487b861e1abc4c146339 371 Pfam PF00005 ABC transporter 25 166 5.2E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01450 55c878b18735487b861e1abc4c146339 371 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01450 55c878b18735487b861e1abc4c146339 371 SMART SM00382 34 217 2.6E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01450 55c878b18735487b861e1abc4c146339 371 Gene3D G3DSA:3.40.50.300 6 242 5.6E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01450 55c878b18735487b861e1abc4c146339 371 PANTHER PTHR24220:SF150 11 301 4.2E-158 T 21-04-2016 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 PRINTS PR01249 Ribosomal protein L31 signature 61 79 1.4E-10 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 PRINTS PR01249 Ribosomal protein L31 signature 46 61 1.4E-10 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-10 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 82 26.17 T 21-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 SUPERFAMILY SSF143800 1 81 5.49E-17 T 21-04-2016 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 ProSitePatterns PS01143 Ribosomal protein L31 signature. 50 71 - T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 81 1.5E-12 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 PANTHER PTHR33280 1 79 7.1E-24 T 21-04-2016 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 Pfam PF01197 Ribosomal protein L31 1 80 5.6E-21 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09680 c28782df5e426d82235dbe5b787e7a7d 89 PANTHER PTHR33280:SF3 1 79 7.1E-24 T 21-04-2016 APL_RS04595 60cf98ffd98bd39a035ae01488501668 148 Gene3D G3DSA:3.30.700.10 14 134 3.4E-33 T 21-04-2016 APL_RS04595 60cf98ffd98bd39a035ae01488501668 148 Pfam PF13633 Prokaryotic N-terminal methylation site 12 37 3.3E-10 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site APL_RS04595 60cf98ffd98bd39a035ae01488501668 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 1.5E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site APL_RS04595 60cf98ffd98bd39a035ae01488501668 148 SUPERFAMILY SSF54523 35 145 5.76E-23 T 21-04-2016 APL_RS04595 60cf98ffd98bd39a035ae01488501668 148 PANTHER PTHR30093 1 68 8.2E-17 T 21-04-2016 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01022 Outer membrane protein A signature 305 324 1.9E-11 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01022 Outer membrane protein A signature 124 140 1.9E-11 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01022 Outer membrane protein A signature 339 352 1.9E-11 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01022 Outer membrane protein A signature 237 252 1.9E-11 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 SUPERFAMILY SSF103088 239 360 8.76E-30 T 21-04-2016 IPR006665 OmpA-like domain APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 Gene3D G3DSA:3.30.1330.60 238 360 3.5E-35 T 21-04-2016 IPR006665 OmpA-like domain APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PANTHER PTHR30128:SF16 1 368 1.6E-59 T 21-04-2016 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01021 OMPA domain signature 281 296 6.7E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01021 OMPA domain signature 296 312 6.7E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PRINTS PR01021 OMPA domain signature 249 271 6.7E-18 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 Gene3D G3DSA:2.40.160.20 9 237 3.6E-68 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 PANTHER PTHR30128 1 368 1.6E-59 T 21-04-2016 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 SUPERFAMILY SSF56925 20 227 4.19E-34 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 Pfam PF00691 OmpA family 248 340 6.8E-20 T 21-04-2016 IPR006665 OmpA-like domain APL_RS07510 4f8e700bad88dbe82a4069bcd7c59bb9 368 Pfam PF01389 OmpA-like transmembrane domain 21 226 6.9E-67 T 21-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 Pfam PF00394 Multicopper oxidase 166 293 5.9E-5 T 21-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 22 317 1.9E-97 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 Gene3D G3DSA:2.60.40.420 10 152 6.6E-27 T 21-04-2016 IPR008972 Cupredoxin APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 SUPERFAMILY SSF49503 157 317 7.64E-51 T 21-04-2016 IPR008972 Cupredoxin APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 Gene3D G3DSA:2.60.40.420 153 292 1.5E-43 T 21-04-2016 IPR008972 Cupredoxin APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 Pfam PF07732 Multicopper oxidase 50 158 2.8E-10 T 21-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 SUPERFAMILY SSF49503 21 174 2.17E-39 T 21-04-2016 IPR008972 Cupredoxin APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PANTHER PTHR11709:SF84 16 288 4.5E-43 T 21-04-2016 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PANTHER PTHR11709 16 288 4.5E-43 T 21-04-2016 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 97 116 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 139 155 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 80 97 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 36 54 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 122 137 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS10780 128dc50e0803e13f47f5a84b401a1c67 336 PRINTS PR00695 Copper containing nitrite reductase signature 62 78 6.7E-24 T 21-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 APL_RS05700 50373a3a01bf0ccf06c1b7c83b2b25f3 282 SUPERFAMILY SSF103481 62 135 2.75E-9 T 21-04-2016 APL_RS05700 50373a3a01bf0ccf06c1b7c83b2b25f3 282 SUPERFAMILY SSF103481 188 280 5.1E-12 T 21-04-2016 APL_RS05700 50373a3a01bf0ccf06c1b7c83b2b25f3 282 Pfam PF00892 EamA-like transporter family 145 278 1.6E-17 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS05700 50373a3a01bf0ccf06c1b7c83b2b25f3 282 Pfam PF00892 EamA-like transporter family 4 133 2.6E-13 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS05700 50373a3a01bf0ccf06c1b7c83b2b25f3 282 PANTHER PTHR22911 3 282 5.5E-41 T 21-04-2016 APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 Gene3D G3DSA:3.90.1150.10 281 392 2.4E-19 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 PANTHER PTHR11601:SF17 1 398 3.8E-129 T 21-04-2016 APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 Pfam PF00266 Aminotransferase class-V 24 387 1.3E-121 T 21-04-2016 IPR000192 Aminotransferase class V domain APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 Gene3D G3DSA:3.40.640.10 38 280 4.4E-71 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 SUPERFAMILY SSF53383 6 392 1.95E-97 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS05865 615a784c65d85a69c5b0bd5ec6127dbe 400 PANTHER PTHR11601 1 398 3.8E-129 T 21-04-2016 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.0E-38 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 SUPERFAMILY SSF46911 3 74 4.84E-30 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 21-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 PANTHER PTHR13479 2 74 3.2E-35 T 21-04-2016 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 Gene3D G3DSA:4.10.640.10 8 74 3.4E-33 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.526 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 6.6E-19 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 6.6E-19 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 6.6E-19 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 6.6E-19 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06120 dddd4b67175557a00c06ca07dbd4be1e 75 Pfam PF01084 Ribosomal protein S18 19 68 1.4E-25 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 368 1.3E-71 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 Gene3D G3DSA:3.40.50.10300 183 399 1.6E-86 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 394 1.1E-156 T 21-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 Gene3D G3DSA:3.40.50.1950 2 181 1.1E-63 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 PANTHER PTHR14359:SF20 1 398 3.2E-185 T 21-04-2016 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 SUPERFAMILY SSF52507 1 180 2.09E-59 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 SUPERFAMILY SSF102645 183 398 4.71E-77 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 PANTHER PTHR14359 1 398 3.2E-185 T 21-04-2016 APL_RS10430 2439e85d2d892b301b2966d06e2b8faf 401 Pfam PF02441 Flavoprotein 5 133 1.3E-32 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 224 1.3E-78 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 SMART SM00849 12 165 3.2E-26 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 PANTHER PTHR11935 1 235 4.5E-74 T 21-04-2016 APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 Pfam PF00753 Metallo-beta-lactamase superfamily 14 139 1.3E-10 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 PANTHER PTHR11935:SF7 1 235 4.5E-74 T 21-04-2016 APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 235 39.272 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 SUPERFAMILY SSF56281 2 230 3.14E-56 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 Gene3D G3DSA:3.60.15.10 4 234 2.4E-69 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS02130 bafdba4ad79a42aca2e0c444f790a3bc 235 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 235 1.6E-15 T 21-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 159.615 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 19 129 5.8E-49 T 21-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 SUPERFAMILY SSF55620 183 263 2.67E-9 T 21-04-2016 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 PANTHER PTHR34354:SF1 1 279 1.6E-99 T 21-04-2016 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 Pfam PF14489 QueF-like protein 193 266 2.0E-25 T 21-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 TIGRFAM TIGR03138 QueF: queuine synthase 8 279 2.1E-125 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 Gene3D G3DSA:3.30.1130.10 19 133 1.1E-43 T 21-04-2016 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 PANTHER PTHR34354 1 279 1.6E-99 T 21-04-2016 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 PIRSF PIRSF004750 4 279 2.2E-129 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS04420 54c7f0d7bad1993d4311bcae0d6a510a 279 Gene3D G3DSA:3.30.1130.10 144 279 2.5E-55 T 21-04-2016 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 SUPERFAMILY SSF51366 2 228 3.88E-79 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 PANTHER PTHR32119 1 230 1.1E-117 T 21-04-2016 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 SMART SM00934 4 225 2.2E-94 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 PANTHER PTHR32119:SF2 1 230 1.1E-117 T 21-04-2016 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 224 1.1E-51 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 225 1.4E-60 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 21-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 Gene3D G3DSA:3.20.20.70 2 229 2.9E-90 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03830 2516bc726bf6304ca05d1bda27d04b80 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 230 40.48 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS10725 3bad633569b9db90833b0d86f20f4c12 261 Pfam PF06250 Protein of unknown function (DUF1016) 41 237 5.3E-74 T 21-04-2016 IPR009362 Protein of unknown function DUF1016 APL_RS10725 3bad633569b9db90833b0d86f20f4c12 261 PANTHER PTHR30547 43 246 8.9E-87 T 21-04-2016 APL_RS10725 3bad633569b9db90833b0d86f20f4c12 261 PANTHER PTHR30547:SF5 43 246 8.9E-87 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 PIRSF PIRSF000538 1 485 1.2E-94 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 372 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 SUPERFAMILY SSF53067 255 482 6.48E-52 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 PANTHER PTHR10196:SF73 1 484 1.8E-272 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 PANTHER PTHR10196 1 484 1.8E-272 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 Gene3D G3DSA:3.30.420.40 257 484 7.7E-44 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 SUPERFAMILY SSF53067 1 245 2.14E-62 T 21-04-2016 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 3.1E-83 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 437 6.3E-26 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APL_RS08310 0970d93a1381f89f07c9b1f4e5f524a4 485 Gene3D G3DSA:3.30.420.40 1 244 2.1E-60 T 21-04-2016 APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 SUPERFAMILY SSF55298 10 114 7.23E-29 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 21-04-2016 IPR019897 RidA, conserved site APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 Gene3D G3DSA:3.30.1330.40 10 113 5.6E-24 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 Pfam PF01042 Endoribonuclease L-PSP 2 113 1.1E-27 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 PANTHER PTHR11803:SF17 1 114 3.1E-31 T 21-04-2016 APL_RS00380 32d4b5b93d23b1ad7e2db87b9258eebc 114 PANTHER PTHR11803 1 114 3.1E-31 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 5 397 51.106 T 21-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 200 1.9E-83 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 PANTHER PTHR21327 4 400 6.5E-222 T 21-04-2016 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 201 1.0E-76 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 SUPERFAMILY SSF55821 3 205 6.87E-83 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Pfam PF00925 GTP cyclohydrolase II 211 374 1.3E-70 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 205 37.978 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Gene3D G3DSA:3.90.870.10 2 211 1.7E-94 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 206 401 42.427 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 SUPERFAMILY SSF142695 206 378 5.62E-68 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 PIRSF PIRSF001259 4 401 3.9E-172 T 21-04-2016 APL_RS01975 f4806257aea43ccc7662b4053dfd91a2 401 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 214 398 5.2E-83 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APL_RS04140 e818ab9f00c8453195941c355c080cb0 94 SUPERFAMILY SSF103473 6 93 1.7E-7 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS04140 e818ab9f00c8453195941c355c080cb0 94 PANTHER PTHR23521 2 94 6.0E-12 T 21-04-2016 APL_RS04140 e818ab9f00c8453195941c355c080cb0 94 PANTHER PTHR23521:SF2 2 94 6.0E-12 T 21-04-2016 APL_RS04140 e818ab9f00c8453195941c355c080cb0 94 Gene3D G3DSA:1.20.1250.20 6 93 1.2E-5 T 21-04-2016 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 Gene3D G3DSA:3.40.430.10 1 162 7.0E-55 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PRINTS PR00070 Dihydrofolate reductase signature 94 108 3.6E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.6E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.6E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.6E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PANTHER PTHR22778:SF16 1 162 1.2E-39 T 21-04-2016 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 Pfam PF00186 Dihydrofolate reductase 2 161 1.5E-54 T 21-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PIRSF PIRSF000194 1 162 4.8E-54 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 PANTHER PTHR22778 1 162 1.2E-39 T 21-04-2016 APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 SUPERFAMILY SSF53597 1 162 5.47E-52 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain APL_RS04610 0632ddc0de12a2efc6d84e5443e1839c 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 21-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS01325 0f7921e5458960b06c8f37e565e47ddb 157 PANTHER PTHR39563 7 157 1.2E-112 T 21-04-2016 APL_RS01325 0f7921e5458960b06c8f37e565e47ddb 157 SUPERFAMILY SSF53271 9 147 8.92E-30 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS01325 0f7921e5458960b06c8f37e565e47ddb 157 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 6 157 40.424 T 21-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 APL_RS01325 0f7921e5458960b06c8f37e565e47ddb 157 Pfam PF00156 Phosphoribosyl transferase domain 17 150 6.5E-15 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS01325 0f7921e5458960b06c8f37e565e47ddb 157 Gene3D G3DSA:3.40.50.2020 8 148 6.2E-42 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS08090 bd5e06f1935225daeca433a75018be00 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 272 1.8E-101 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 38.822 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 SUPERFAMILY SSF54506 2 274 6.16E-61 T 21-04-2016 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 Gene3D G3DSA:3.10.310.10 121 262 1.7E-50 T 21-04-2016 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 Pfam PF01678 Diaminopimelate epimerase 152 266 2.6E-32 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 Pfam PF01678 Diaminopimelate epimerase 3 122 8.8E-35 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 PANTHER PTHR31689 1 272 1.1E-136 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 21-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08090 bd5e06f1935225daeca433a75018be00 274 Gene3D G3DSA:3.10.310.10 1 120 2.1E-49 T 21-04-2016 APL_RS05480 c42dc68fcbd5536e86844d16d7ceadca 248 Gene3D G3DSA:1.25.40.10 166 245 9.8E-28 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05480 c42dc68fcbd5536e86844d16d7ceadca 248 SUPERFAMILY SSF48452 117 231 1.73E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05480 c42dc68fcbd5536e86844d16d7ceadca 248 Gene3D G3DSA:1.25.40.10 106 165 1.3E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05480 c42dc68fcbd5536e86844d16d7ceadca 248 SMART SM00028 125 158 0.0051 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS05480 c42dc68fcbd5536e86844d16d7ceadca 248 SMART SM00028 196 229 6.1 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 SUPERFAMILY SSF54111 1 100 1.7E-45 T 21-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 8.0E-47 T 21-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 PIRSF PIRSF001223 1 100 2.3E-49 T 21-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 Pfam PF00547 Urease, gamma subunit 1 99 9.7E-47 T 21-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 Gene3D G3DSA:3.30.280.10 1 100 2.1E-48 T 21-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 PANTHER PTHR33569:SF1 2 100 9.0E-43 T 21-04-2016 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 PANTHER PTHR33569 2 100 9.0E-43 T 21-04-2016 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.161 T 21-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS08585 a384482559b19b8182be63bc0b7fac13 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.9E-57 T 21-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APL_RS10525 a46a28424e2fd3e5dec00339553ad4f0 76 Pfam PF02416 mttA/Hcf106 family 4 62 3.1E-13 T 21-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APL_RS10525 a46a28424e2fd3e5dec00339553ad4f0 76 PANTHER PTHR33162 1 76 3.0E-19 T 21-04-2016 APL_RS10525 a46a28424e2fd3e5dec00339553ad4f0 76 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.1E-21 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APL_RS10525 a46a28424e2fd3e5dec00339553ad4f0 76 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 23.9 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 SUPERFAMILY SSF52954 327 422 1.37E-22 T 21-04-2016 IPR004154 Anticodon-binding APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Gene3D G3DSA:3.40.50.800 327 421 1.4E-28 T 21-04-2016 IPR004154 Anticodon-binding APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Gene3D G3DSA:3.30.930.10 4 184 2.3E-95 T 21-04-2016 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Gene3D G3DSA:3.30.930.10 220 320 2.3E-95 T 21-04-2016 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 PANTHER PTHR11476:SF9 2 423 2.5E-219 T 21-04-2016 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 SUPERFAMILY SSF55681 5 319 2.03E-98 T 21-04-2016 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 1.0E-151 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 32.476 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 PIRSF PIRSF001549 2 423 1.6E-123 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 PANTHER PTHR11476 2 423 2.5E-219 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Pfam PF03129 Anticodon binding domain 329 421 3.1E-12 T 21-04-2016 IPR004154 Anticodon-binding APL_RS06150 77620c4939d2e318f9990333331f4ffa 423 Pfam PF13393 Histidyl-tRNA synthetase 10 311 5.4E-45 T 21-04-2016 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 Pfam PF13531 Bacterial extracellular solute-binding protein 2 211 2.7E-36 T 21-04-2016 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 1 258 3.4E-99 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 77 85 - T 21-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 Gene3D G3DSA:3.40.190.10 45 209 2.7E-70 T 21-04-2016 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 PANTHER PTHR30368:SF2 1 264 5.4E-138 T 21-04-2016 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 PANTHER PTHR30368 1 264 5.4E-138 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APL_RS09830 055f85dbc2b199c9c1a8cb3c0a3ae6e3 264 SUPERFAMILY SSF53850 2 259 4.73E-63 T 21-04-2016 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PANTHER PTHR11556 1 334 7.4E-175 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 1.4E-73 T 21-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 305 330 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 4.1E-62 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 SUPERFAMILY SSF56655 2 329 1.55E-104 T 21-04-2016 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PIRSF PIRSF500210 1 334 2.1E-126 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 331 41.321 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 Gene3D G3DSA:3.40.190.80 197 331 6.8E-55 T 21-04-2016 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 Gene3D G3DSA:3.30.540.10 2 196 4.3E-75 T 21-04-2016 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 PIRSF PIRSF000904 1 334 3.2E-122 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APL_RS07655 245de7b8ae60409c5ae6a9d39ed733b1 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 271 283 - T 21-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 Gene3D G3DSA:1.10.1240.20 462 529 6.2E-25 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 Gene3D G3DSA:1.10.530.10 532 686 1.7E-41 T 21-04-2016 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 Pfam PF01464 Transglycosylase SLT domain 550 650 2.8E-26 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 SUPERFAMILY SSF53955 537 691 1.5E-38 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS03555 9730966ef611191ef769171aa322d3a1 702 SUPERFAMILY SSF48435 58 534 5.1E-83 T 21-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 PANTHER PTHR21666 520 700 1.1E-48 T 21-04-2016 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 Pfam PF14718 Soluble lytic murein transglycosylase L domain 465 529 2.7E-24 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 PANTHER PTHR21666:SF108 520 700 1.1E-48 T 21-04-2016 APL_RS03555 9730966ef611191ef769171aa322d3a1 702 Gene3D G3DSA:1.25.20.10 58 447 8.6E-79 T 21-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 56 162 4.8E-7 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 21-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 SUPERFAMILY SSF55681 2 211 2.98E-66 T 21-04-2016 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 131 1.0E-25 T 21-04-2016 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 PANTHER PTHR10993 1 217 3.3E-74 T 21-04-2016 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 PIRSF PIRSF016262 1 217 2.4E-58 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 Gene3D G3DSA:3.90.1550.10 2 208 1.7E-68 T 21-04-2016 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 Hamap MF_00013 Octanoyltransferase [lipB]. 3 211 37.284 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS08465 823236b059d0dfd5a868ebcc6da2ac1a 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 209 4.4E-72 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APL_RS04705 f15eae967c0940cf627639c64d712523 313 PIRSF PIRSF026649 5 311 1.8E-88 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APL_RS04705 f15eae967c0940cf627639c64d712523 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 302 7.5E-101 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APL_RS04705 f15eae967c0940cf627639c64d712523 313 PANTHER PTHR30606 5 313 7.7E-148 T 21-04-2016 APL_RS04705 f15eae967c0940cf627639c64d712523 313 PANTHER PTHR30606:SF5 5 313 7.7E-148 T 21-04-2016 APL_RS04705 f15eae967c0940cf627639c64d712523 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 312 7.8E-136 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APL_RS04705 f15eae967c0940cf627639c64d712523 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 312 48.798 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 SMART SM00862 156 233 6.0E-16 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 Gene3D G3DSA:1.10.10.10 134 235 3.4E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 SMART SM00448 4 114 7.5E-37 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 Gene3D G3DSA:3.40.50.2300 2 128 1.5E-36 T 21-04-2016 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 SUPERFAMILY SSF46894 134 235 8.22E-22 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 SUPERFAMILY SSF52172 2 126 3.56E-36 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 PANTHER PTHR26402:SF586 4 238 6.2E-143 T 21-04-2016 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 PANTHER PTHR26402 4 238 6.2E-143 T 21-04-2016 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 1.3E-17 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS00240 540e528c0cc634cfe908f01a1636cd91 238 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 SUPERFAMILY SSF53613 8 295 6.7E-72 T 21-04-2016 IPR029056 Ribokinase-like APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 PIRSF PIRSF000535 4 314 8.5E-113 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 7 311 1.5E-104 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 Pfam PF00294 pfkB family carbohydrate kinase 18 297 5.2E-65 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 PANTHER PTHR10584:SF170 6 314 4.1E-112 T 21-04-2016 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 PANTHER PTHR10584 6 314 4.1E-112 T 21-04-2016 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 Gene3D G3DSA:3.40.1190.20 39 314 1.9E-85 T 21-04-2016 IPR029056 Ribokinase-like APL_RS01775 2d795adea488656250b0ee758ae4c5fd 315 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 7 311 3.6E-105 T 21-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 PANTHER PTHR11615 1 826 0.0 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 SUPERFAMILY SSF53706 52 666 3.01E-162 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Gene3D G3DSA:3.40.228.10 193 404 2.6E-47 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 722 749 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Gene3D G3DSA:2.40.40.20 655 815 2.3E-56 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 6 826 0.0 T 21-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 SUPERFAMILY SSF50692 674 823 6.7E-43 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Gene3D G3DSA:3.40.50.740 405 510 2.2E-42 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Gene3D G3DSA:3.40.50.740 85 187 2.2E-42 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Pfam PF01568 Molydopterin dinucleotide binding domain 682 802 2.5E-23 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 PANTHER PTHR11615:SF133 1 826 0.0 T 21-04-2016 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Pfam PF00384 Molybdopterin oxidoreductase 92 566 1.9E-71 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 509 526 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS09555 64e8bb98e4fa93ac0f0a30d1bfd91db6 827 Gene3D G3DSA:3.90.55.10 511 614 3.7E-32 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 SUPERFAMILY SSF55261 289 420 1.14E-45 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.0E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 3.0E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 3.0E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 3.0E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Gene3D G3DSA:3.30.1360.30 277 415 2.1E-47 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 559 5.2E-105 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 564 36.502 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Pfam PF01336 OB-fold nucleic acid binding domain 19 100 4.5E-15 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Gene3D G3DSA:3.30.930.10 132 276 4.8E-110 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Gene3D G3DSA:3.30.930.10 416 585 4.8E-110 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PANTHER PTHR22594 1 297 2.2E-247 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PANTHER PTHR22594 371 572 2.2E-247 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 587 2.7E-271 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 SUPERFAMILY SSF55681 421 584 3.58E-105 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 SUPERFAMILY SSF55681 109 288 3.58E-105 T 21-04-2016 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Pfam PF02938 GAD domain 308 407 1.6E-31 T 21-04-2016 IPR029351 GAD domain APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PANTHER PTHR22594:SF5 1 297 2.2E-247 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 PANTHER PTHR22594:SF5 371 572 2.2E-247 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 SUPERFAMILY SSF50249 2 106 8.76E-33 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06015 adb047c52706cf8f511251ea7bd67f2d 591 Gene3D G3DSA:2.40.50.140 1 107 8.2E-38 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06295 b8953441ff25f99e59b7d24dd0ca9f0f 285 Gene3D G3DSA:3.40.50.1820 5 278 2.7E-79 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS06295 b8953441ff25f99e59b7d24dd0ca9f0f 285 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 278 2.4E-115 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APL_RS06295 b8953441ff25f99e59b7d24dd0ca9f0f 285 Pfam PF00756 Putative esterase 24 272 9.3E-64 T 21-04-2016 IPR000801 Putative esterase APL_RS06295 b8953441ff25f99e59b7d24dd0ca9f0f 285 PANTHER PTHR10061 3 281 1.7E-164 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APL_RS06295 b8953441ff25f99e59b7d24dd0ca9f0f 285 SUPERFAMILY SSF53474 4 278 4.88E-91 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS05490 cd3e75b3f3f4ceb4f87f9a2e4c3811a0 177 Gene3D G3DSA:3.40.30.10 10 175 6.9E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05490 cd3e75b3f3f4ceb4f87f9a2e4c3811a0 177 PANTHER PTHR10681:SF107 6 176 6.7E-28 T 21-04-2016 APL_RS05490 cd3e75b3f3f4ceb4f87f9a2e4c3811a0 177 PANTHER PTHR10681 6 176 6.7E-28 T 21-04-2016 APL_RS05490 cd3e75b3f3f4ceb4f87f9a2e4c3811a0 177 Pfam PF08534 Redoxin 39 161 9.5E-12 T 21-04-2016 IPR013740 Redoxin GO:0016491 APL_RS05490 cd3e75b3f3f4ceb4f87f9a2e4c3811a0 177 SUPERFAMILY SSF52833 38 176 1.46E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PANTHER PTHR10795 243 434 5.9E-14 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PANTHER PTHR10795 201 225 5.9E-14 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 SUPERFAMILY SSF103515 640 932 6.15E-39 T 21-04-2016 IPR005546 Autotransporter beta-domain APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 SUPERFAMILY SSF52743 15 461 5.07E-59 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 Gene3D G3DSA:3.40.50.200 34 154 4.1E-49 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 Gene3D G3DSA:3.40.50.200 200 410 4.1E-49 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PANTHER PTHR10795:SF368 243 434 5.9E-14 T 21-04-2016 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PANTHER PTHR10795:SF368 201 225 5.9E-14 T 21-04-2016 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 Pfam PF00082 Subtilase family 49 399 3.4E-42 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PRINTS PR00723 Subtilisin serine protease family (S8) signature 112 125 7.6E-9 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PRINTS PR00723 Subtilisin serine protease family (S8) signature 49 68 7.6E-9 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 PRINTS PR00723 Subtilisin serine protease family (S8) signature 348 364 7.6E-9 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 Gene3D G3DSA:2.40.128.130 634 932 6.3E-36 T 21-04-2016 IPR005546 Autotransporter beta-domain APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 Pfam PF03797 Autotransporter beta-domain 677 915 2.3E-24 T 21-04-2016 IPR005546 Autotransporter beta-domain APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 SMART SM00869 675 922 5.2E-19 T 21-04-2016 IPR005546 Autotransporter beta-domain APL_RS01875 53d54bbbe578f3ca07684645715b1415 932 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 349 359 - T 21-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 1.4E-108 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 87.801 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 SUPERFAMILY SSF56194 202 339 1.57E-51 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Pfam PF01565 FAD binding domain 19 149 8.1E-22 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 PANTHER PTHR21071:SF6 1 337 5.3E-174 T 21-04-2016 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Gene3D G3DSA:3.90.78.10 230 339 3.5E-47 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 SUPERFAMILY SSF56176 3 196 1.47E-44 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Gene3D G3DSA:3.30.43.10 3 67 1.3E-21 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 328 9.1E-36 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 Gene3D G3DSA:3.30.465.10 72 229 3.7E-51 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS09860 59e0115572606ac7f7f85d1f9d6c068f 342 PANTHER PTHR21071 1 337 5.3E-174 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 ProSitePatterns PS01057 SAICAR synthetase signature 1. 98 112 - T 21-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 Pfam PF01259 SAICAR synthetase 6 261 5.2E-103 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 PANTHER PTHR11609 3 285 2.1E-187 T 21-04-2016 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 PANTHER PTHR11609:SF6 3 285 2.1E-187 T 21-04-2016 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 SUPERFAMILY SSF56104 4 284 4.58E-104 T 21-04-2016 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 285 26.498 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 1 285 5.0E-104 T 21-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 Gene3D G3DSA:3.30.470.20 110 240 5.4E-56 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 Gene3D G3DSA:3.30.200.20 4 109 1.4E-44 T 21-04-2016 APL_RS10690 88a88975a17ea8da860c4d31b3ba8ada 285 ProSitePatterns PS01058 SAICAR synthetase signature 2. 197 205 - T 21-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Gene3D G3DSA:2.40.40.20 350 377 7.7E-37 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Gene3D G3DSA:2.40.40.20 418 490 7.7E-37 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1315 1.1E-76 T 21-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1367 0.0 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 SMART SM00663 236 515 2.0E-180 T 21-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376:SF32 8 552 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 394 5.8E-8 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 486 7.1E-26 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 2.9E-18 T 21-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 343 1.8E-87 T 21-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376 1303 1378 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376:SF32 1177 1262 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376:SF32 1303 1378 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1376 10.423 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376 571 944 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376 1177 1262 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376:SF32 571 944 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376:SF32 964 1158 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376 8 552 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Gene3D G3DSA:2.40.50.100 1157 1211 2.8E-8 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 645 1.7E-27 T 21-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 14 611 32.755 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 SUPERFAMILY SSF64484 18 945 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 SUPERFAMILY SSF64484 1134 1368 0.0 T 21-04-2016 APL_RS09180 7f35a04202508383f1dc61390f08f5eb 1412 PANTHER PTHR19376 964 1158 0.0 T 21-04-2016 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 SUPERFAMILY SSF56042 141 314 1.27E-50 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 Gene3D G3DSA:3.30.1330.10 5 138 7.1E-33 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 145 314 6.4E-27 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 PANTHER PTHR10256 1 321 1.5E-133 T 21-04-2016 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 TIGRFAM TIGR00476 selD: selenide, water dikinase 2 289 1.5E-121 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 PIRSF PIRSF036407 1 322 1.5E-109 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 Gene3D G3DSA:3.90.650.10 152 315 1.1E-16 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 SUPERFAMILY SSF55326 8 136 1.96E-37 T 21-04-2016 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 Hamap MF_00625 Selenide, water dikinase [selD]. 1 323 39.591 T 21-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APL_RS01690 261f625cb7db50e00eef5f23d7fc44bb 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 133 9.9E-20 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.245 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 21-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 Pfam PF00468 Ribosomal protein L34 1 44 2.6E-25 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 6.8E-27 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 PANTHER PTHR14503 1 44 4.8E-24 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10280 c791f33087c25c4b43cf935561ab3011 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 4.0E-15 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SMART SM00487 603 793 9.0E-37 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Gene3D G3DSA:3.30.2060.10 133 209 1.3E-13 T 21-04-2016 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 PANTHER PTHR14025:SF21 386 1145 0.0 T 21-04-2016 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF52540 15 344 5.58E-102 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1110 28.752 T 21-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Gene3D G3DSA:3.40.50.300 803 959 8.1E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Gene3D G3DSA:3.40.50.300 594 789 2.0E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Pfam PF00271 Helicase conserved C-terminal domain 808 912 3.0E-16 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 149 1084 0.0 T 21-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Pfam PF00270 DEAD/DEAH box helicase 608 768 2.2E-20 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 PANTHER PTHR14025 386 1145 0.0 T 21-04-2016 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF52540 355 468 6.9E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF143517 998 1148 1.44E-43 T 21-04-2016 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF141259 473 551 9.94E-23 T 21-04-2016 IPR003711 CarD-like/TRCF domain APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SMART SM01058 482 579 3.8E-47 T 21-04-2016 IPR003711 CarD-like/TRCF domain APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF52540 785 993 5.32E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SUPERFAMILY SSF52540 526 786 9.46E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Pfam PF03461 TRCF domain 1012 1104 1.7E-27 T 21-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SMART SM00490 829 913 9.7E-16 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 SMART SM00982 1011 1111 7.9E-52 T 21-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APL_RS07050 54688ae5fcfdee7edfc49446d62045d4 1149 Pfam PF02559 CarD-like/TRCF domain 483 578 8.6E-25 T 21-04-2016 IPR003711 CarD-like/TRCF domain APL_RS06460 0665724d1176c437e827c4018edcc22d 394 Pfam PF13416 Bacterial extracellular solute-binding protein 47 339 1.3E-37 T 21-04-2016 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PANTHER PTHR30061 1 394 3.7E-121 T 21-04-2016 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 SUPERFAMILY SSF53850 28 392 6.09E-88 T 21-04-2016 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 168 187 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 67 85 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 296 317 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 33 51 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 354 373 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 148 167 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 127 146 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PRINTS PR00181 Maltose binding protein signature 230 249 2.7E-78 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 Gene3D G3DSA:3.40.190.10 28 150 1.5E-24 T 21-04-2016 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 Gene3D G3DSA:3.40.190.10 151 319 1.4E-53 T 21-04-2016 APL_RS06460 0665724d1176c437e827c4018edcc22d 394 PANTHER PTHR30061:SF21 1 394 3.7E-121 T 21-04-2016 APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 SMART SM00382 37 231 7.3E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 PANTHER PTHR24220:SF560 14 258 1.2E-151 T 21-04-2016 APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 Pfam PF00005 ABC transporter 28 183 9.1E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 SUPERFAMILY SSF52540 12 247 1.08E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 PANTHER PTHR24220 14 258 1.2E-151 T 21-04-2016 APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 259 1.7E-119 T 21-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 Gene3D G3DSA:3.40.50.300 9 250 4.3E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06565 9f2deb555e1e11aac4c399b9961cdf36 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 PANTHER PTHR10025 1 555 0.0 T 21-04-2016 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Gene3D G3DSA:3.30.1510.10 128 246 6.7E-56 T 21-04-2016 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 SUPERFAMILY SSF52540 4 554 2.78E-241 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Gene3D G3DSA:3.40.50.300 13 127 6.7E-147 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Gene3D G3DSA:3.40.50.300 247 441 6.7E-147 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Gene3D G3DSA:3.10.410.10 443 532 5.4E-39 T 21-04-2016 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 49.517 T 21-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 3.4E-269 T 21-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APL_RS02395 fbe3a631f51d4ed6b5a23699654ad089 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 21-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APL_RS01230 355a7efef9793d1421e5bf1e8ab87d5e 395 SUPERFAMILY SSF53756 131 388 2.2E-21 T 21-04-2016 APL_RS01230 355a7efef9793d1421e5bf1e8ab87d5e 395 SUPERFAMILY SSF48452 31 104 5.48E-17 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS01230 355a7efef9793d1421e5bf1e8ab87d5e 395 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 309 341 5.3E-7 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS01230 355a7efef9793d1421e5bf1e8ab87d5e 395 Gene3D G3DSA:3.40.50.2000 308 373 6.5E-12 T 21-04-2016 APL_RS01230 355a7efef9793d1421e5bf1e8ab87d5e 395 Gene3D G3DSA:1.25.40.10 31 101 6.9E-17 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 429 49.353 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 Gene3D G3DSA:3.90.1150.10 337 427 8.8E-57 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 Gene3D G3DSA:3.90.1150.10 3 62 8.8E-57 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 426 1.3E-176 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 Gene3D G3DSA:3.40.640.10 63 332 5.5E-87 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 SUPERFAMILY SSF53383 4 427 2.3E-128 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 PANTHER PTHR11986 1 432 8.3E-205 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 Pfam PF00202 Aminotransferase class-III 26 426 3.4E-129 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 PIRSF PIRSF000521 27 428 5.4E-30 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS04920 dc429c5f0d37c93ca3f251148bc54c02 432 PANTHER PTHR11986:SF8 1 432 8.3E-205 T 21-04-2016 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 PANTHER PTHR12220 1 136 7.8E-76 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 21-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 21-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 Gene3D G3DSA:3.90.1170.10 23 133 4.9E-53 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 SUPERFAMILY SSF54686 3 133 3.66E-54 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.8E-46 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.5 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.0E-58 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.5E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.5E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.5E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS09395 f112738317ce40dafb606f6a1044fdb6 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.5E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APL_RS05185 a20c9f59e3b1639a073f9b976231f0a3 122 SUPERFAMILY SSF53098 2 115 1.52E-23 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05185 a20c9f59e3b1639a073f9b976231f0a3 122 Gene3D G3DSA:3.30.420.10 4 113 4.6E-20 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05185 a20c9f59e3b1639a073f9b976231f0a3 122 Pfam PF13333 Integrase core domain 66 121 2.8E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS05185 a20c9f59e3b1639a073f9b976231f0a3 122 PANTHER PTHR32552 1 122 6.2E-34 T 21-04-2016 APL_RS06420 2650965537691e1f134090a4f9d67276 286 PANTHER PTHR10000 55 284 7.4E-101 T 21-04-2016 APL_RS06420 2650965537691e1f134090a4f9d67276 286 Gene3D G3DSA:1.10.150.210 86 137 3.8E-26 T 21-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 APL_RS06420 2650965537691e1f134090a4f9d67276 286 PANTHER PTHR10000:SF7 55 284 7.4E-101 T 21-04-2016 APL_RS06420 2650965537691e1f134090a4f9d67276 286 Gene3D G3DSA:3.40.50.1000 138 275 2.7E-37 T 21-04-2016 IPR023214 HAD-like domain APL_RS06420 2650965537691e1f134090a4f9d67276 286 SUPERFAMILY SSF56784 76 279 4.28E-49 T 21-04-2016 IPR023214 HAD-like domain APL_RS06420 2650965537691e1f134090a4f9d67276 286 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 76 246 1.0E-28 T 21-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APL_RS06420 2650965537691e1f134090a4f9d67276 286 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 62 279 3.8E-84 T 21-04-2016 APL_RS06420 2650965537691e1f134090a4f9d67276 286 Pfam PF12710 haloacid dehalogenase-like hydrolase 115 244 3.1E-14 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 TIGRFAM TIGR00191 thrB: homoserine kinase 4 315 1.2E-112 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PRINTS PR00958 Homoserine kinase signature 104 119 1.6E-33 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PRINTS PR00958 Homoserine kinase signature 182 199 1.6E-33 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PRINTS PR00958 Homoserine kinase signature 144 157 1.6E-33 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PRINTS PR00958 Homoserine kinase signature 261 276 1.6E-33 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PRINTS PR00958 Homoserine kinase signature 11 26 1.6E-33 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 97 108 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 Gene3D G3DSA:3.30.230.10 4 171 1.7E-47 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 Hamap MF_00384 Homoserine kinase [thrB]. 4 314 30.899 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PIRSF PIRSF000676 1 316 5.9E-80 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 SUPERFAMILY SSF54211 5 192 9.11E-33 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 Gene3D G3DSA:3.30.70.890 175 305 6.4E-39 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 Pfam PF08544 GHMP kinases C terminal 235 294 4.4E-10 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 Pfam PF00288 GHMP kinases N terminal domain 90 157 1.5E-13 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 SUPERFAMILY SSF55060 179 295 1.76E-31 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PANTHER PTHR20861 1 313 1.1E-118 T 21-04-2016 APL_RS01275 863db878a5383d665dc9eb36afa9979e 316 PANTHER PTHR20861:SF1 1 313 1.1E-118 T 21-04-2016 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 PANTHER PTHR30333 12 368 1.7E-164 T 21-04-2016 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 SUPERFAMILY SSF46626 310 363 6.91E-5 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 PIRSF PIRSF000014 1 372 4.3E-138 T 21-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 10 174 5.8E-65 T 21-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 Gene3D G3DSA:1.10.3820.10 6 175 3.6E-24 T 21-04-2016 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 Gene3D G3DSA:1.10.3820.10 317 323 3.6E-24 T 21-04-2016 APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 SUPERFAMILY SSF48695 12 177 3.03E-44 T 21-04-2016 IPR011031 Multihaem cytochrome APL_RS03595 5d30656178647d2749c5b3c000d1c976 372 PANTHER PTHR30333:SF3 12 368 1.7E-164 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF52317 1039 1294 5.87E-92 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF56042 828 1035 2.69E-54 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 PANTHER PTHR10099 2 1298 0.0 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF55326 621 817 6.8E-68 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 968 8.1E-15 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 7.8E-29 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Gene3D G3DSA:3.30.1330.10 647 811 5.1E-16 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Gene3D G3DSA:3.30.1330.10 213 422 5.0E-41 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF55326 223 429 4.88E-63 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 3 1298 21.115 T 21-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF56042 433 616 2.39E-54 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF82697 3 153 1.36E-49 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 6 1296 0.0 T 21-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 PANTHER PTHR10099:SF5 2 1298 0.0 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1294 1.8E-98 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 Gene3D G3DSA:3.40.50.880 1043 1267 1.6E-11 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SMART SM01211 1042 1297 7.3E-145 T 21-04-2016 APL_RS08930 9a862fabed56823d79e1c6c4a02c1b5d 1298 SUPERFAMILY SSF109736 157 222 2.75E-22 T 21-04-2016 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Gene3D G3DSA:3.40.50.670 725 793 1.8E-100 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Gene3D G3DSA:3.40.50.670 411 557 1.8E-100 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 427 441 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 494 510 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 532 544 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 118 132 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 743 759 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 512 529 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 40 55 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 273 286 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR00418 DNA topoisomerase II family signature 75 88 1.2E-72 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Pfam PF01751 Toprim domain 426 538 1.4E-18 T 21-04-2016 IPR006171 Toprim domain APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SMART SM00433 40 804 4.0E-283 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PANTHER PTHR10169 1 560 0.0 T 21-04-2016 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PANTHER PTHR10169 731 805 0.0 T 21-04-2016 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SMART SM00387 36 180 1.8E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SUPERFAMILY SSF54211 226 399 1.18E-59 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 739 800 9.5E-30 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Gene3D G3DSA:3.30.565.10 20 223 3.1E-91 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 179 1.1E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Pfam PF00204 DNA gyrase B 226 397 1.1E-58 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 477 486 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 764 776 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 319 335 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 381 401 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 367 381 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 780 796 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 225 247 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.4E-76 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 10 809 0.0 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Gene3D G3DSA:3.30.230.10 225 399 1.5E-76 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SUPERFAMILY SSF55874 9 225 9.04E-76 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SUPERFAMILY SSF56719 401 567 9.15E-88 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 SUPERFAMILY SSF56719 737 802 9.15E-88 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APL_RS04305 e79e05e7096a459344288b4c3e2f7fc3 810 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 7 810 105.23 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 PANTHER PTHR10937:SF0 1 610 0.0 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Gene3D G3DSA:3.60.20.10 2 236 1.7E-81 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.3E-262 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Gene3D G3DSA:3.40.50.10490 446 610 7.5E-66 T 21-04-2016 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 SUPERFAMILY SSF56235 2 234 8.41E-77 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Pfam PF01380 SIS domain 290 416 4.3E-29 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Pfam PF01380 SIS domain 463 592 1.7E-25 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Gene3D G3DSA:3.40.50.10490 244 445 1.2E-66 T 21-04-2016 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Pfam PF13522 Glutamine amidotransferase domain 67 184 6.8E-21 T 21-04-2016 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 SUPERFAMILY SSF53697 245 610 8.07E-111 T 21-04-2016 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.865 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APL_RS08650 4f48e95bb20a1ddf2080eec863990e39 610 PANTHER PTHR10937 1 610 0.0 T 21-04-2016 APL_RS01825 786a5804b8979659990c1d51967a805d 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 7.5E-56 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS01825 786a5804b8979659990c1d51967a805d 230 Gene3D G3DSA:3.10.290.10 1 55 5.8E-19 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS01825 786a5804b8979659990c1d51967a805d 230 Pfam PF00849 RNA pseudouridylate synthase 62 192 2.9E-15 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01825 786a5804b8979659990c1d51967a805d 230 SUPERFAMILY SSF55120 61 227 2.72E-43 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01825 786a5804b8979659990c1d51967a805d 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS01825 786a5804b8979659990c1d51967a805d 230 PANTHER PTHR21600:SF19 1 229 1.1E-70 T 21-04-2016 APL_RS01825 786a5804b8979659990c1d51967a805d 230 Pfam PF01479 S4 domain 1 47 7.8E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS01825 786a5804b8979659990c1d51967a805d 230 SMART SM00363 1 61 1.2E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS01825 786a5804b8979659990c1d51967a805d 230 SUPERFAMILY SSF55174 1 57 3.24E-12 T 21-04-2016 APL_RS01825 786a5804b8979659990c1d51967a805d 230 PANTHER PTHR21600 1 229 1.1E-70 T 21-04-2016 APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 PANTHER PTHR21043 4 104 5.3E-36 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 Pfam PF02410 Ribosomal silencing factor during starvation 9 103 6.6E-26 T 21-04-2016 APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 104 22.881 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 6 103 1.1E-33 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 Gene3D G3DSA:3.30.460.10 3 104 1.8E-34 T 21-04-2016 APL_RS08500 1e2c18d3de4e1a1fca89c61571535069 104 SUPERFAMILY SSF81301 4 104 1.24E-32 T 21-04-2016 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 Pfam PF03952 Enolase, N-terminal domain 4 134 6.0E-58 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 5.0E-208 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 SMART SM01192 143 434 2.2E-209 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 ProSitePatterns PS00164 Enolase signature. 340 353 - T 21-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 SUPERFAMILY SSF54826 3 138 1.3E-55 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 Gene3D G3DSA:3.30.390.10 3 126 3.4E-54 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 165 178 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 317 328 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 369 386 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 107 123 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 340 354 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PRINTS PR00148 Enolase signature 37 51 9.4E-45 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 SMART SM01193 4 134 1.3E-92 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 Hamap MF_00318 Enolase [eno]. 2 417 43.634 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PANTHER PTHR11902 1 421 2.4E-264 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 SUPERFAMILY SSF51604 144 426 5.94E-124 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.3E-134 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 Gene3D G3DSA:3.20.20.120 128 423 1.6E-132 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS05805 72e7c2e519239caf4bc9ad4bd19fbd6a 436 PIRSF PIRSF001400 1 430 1.5E-189 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 SUPERFAMILY SSF51391 1 146 1.31E-44 T 21-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 Pfam PF02581 Thiamine monophosphate synthase/TENI 1 132 7.5E-42 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 Gene3D G3DSA:3.20.20.70 1 145 3.9E-47 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 1 145 7.4E-46 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 PANTHER PTHR20857:SF15 1 146 6.6E-44 T 21-04-2016 APL_RS02845 c7d66574fe25c5d9d75bfcb9bf32ee2a 146 PANTHER PTHR20857 1 146 6.6E-44 T 21-04-2016 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PANTHER PTHR30128 1 364 2.2E-60 T 21-04-2016 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 Pfam PF00691 OmpA family 244 336 3.5E-19 T 21-04-2016 IPR006665 OmpA-like domain APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PANTHER PTHR30128:SF16 1 364 2.2E-60 T 21-04-2016 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01021 OMPA domain signature 292 308 1.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01021 OMPA domain signature 245 267 1.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01021 OMPA domain signature 277 292 1.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 SUPERFAMILY SSF56925 20 225 2.43E-33 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01022 Outer membrane protein A signature 335 348 2.5E-12 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01022 Outer membrane protein A signature 124 140 2.5E-12 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01022 Outer membrane protein A signature 233 248 2.5E-12 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 PRINTS PR01022 Outer membrane protein A signature 301 320 2.5E-12 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 SUPERFAMILY SSF103088 233 356 3.01E-29 T 21-04-2016 IPR006665 OmpA-like domain APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 Pfam PF01389 OmpA-like transmembrane domain 21 223 1.2E-64 T 21-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 Gene3D G3DSA:3.30.1330.60 235 356 1.4E-34 T 21-04-2016 IPR006665 OmpA-like domain APL_RS09865 6d20a40b37fa232aaa5ef714e48c534e 364 Gene3D G3DSA:2.40.160.20 9 234 1.7E-61 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 Pfam PF02481 DNA recombination-mediator protein A 69 274 2.6E-78 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 Gene3D G3DSA:3.40.50.450 109 284 8.4E-8 T 21-04-2016 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 PANTHER PTHR32039:SF8 15 384 9.5E-115 T 21-04-2016 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 SUPERFAMILY SSF102405 78 284 2.98E-42 T 21-04-2016 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 PANTHER PTHR32039 15 384 9.5E-115 T 21-04-2016 APL_RS09085 0795e891013900b10c7be40a2b4532c8 384 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 9.5E-83 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APL_RS06115 94147feb40d2c7500a6f977079564883 149 SUPERFAMILY SSF55658 1 57 2.44E-18 T 21-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.046 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06115 94147feb40d2c7500a6f977079564883 149 SUPERFAMILY SSF55653 60 149 9.03E-26 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 Gene3D G3DSA:3.10.430.100 61 149 2.7E-29 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 Gene3D G3DSA:3.40.5.10 1 52 1.5E-24 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.0E-21 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.5E-27 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal APL_RS06115 94147feb40d2c7500a6f977079564883 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.7E-53 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06115 94147feb40d2c7500a6f977079564883 149 PANTHER PTHR21368 1 149 4.7E-51 T 21-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.7E-71 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 21-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APL_RS09445 3b1368afb93e0ee205421959b26db867 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.93 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 Gene3D G3DSA:3.30.230.10 76 159 5.1E-34 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS09445 3b1368afb93e0ee205421959b26db867 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.5E-30 T 21-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 Gene3D G3DSA:3.30.160.20 10 72 1.3E-30 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS09445 3b1368afb93e0ee205421959b26db867 166 PANTHER PTHR13718 10 164 1.7E-81 T 21-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.5E-29 T 21-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 SUPERFAMILY SSF54768 9 75 6.07E-24 T 21-04-2016 APL_RS09445 3b1368afb93e0ee205421959b26db867 166 SUPERFAMILY SSF54211 79 159 4.3E-27 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 SUPERFAMILY SSF161098 69 138 2.35E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 SUPERFAMILY SSF161098 178 301 2.35E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 PANTHER PTHR30465:SF65 172 315 1.8E-96 T 21-04-2016 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 PANTHER PTHR30465:SF65 1 151 1.8E-96 T 21-04-2016 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 PANTHER PTHR30465 172 315 1.8E-96 T 21-04-2016 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 PANTHER PTHR30465 1 151 1.8E-96 T 21-04-2016 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.5E-36 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 Gene3D G3DSA:1.10.3720.10 181 307 1.6E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04165 10700ad3295d6ddad8e8d590c834c6bd 320 Gene3D G3DSA:1.10.3720.10 68 141 1.6E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 Gene3D G3DSA:3.40.50.1000 10 83 1.1E-50 T 21-04-2016 IPR023214 HAD-like domain APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 Gene3D G3DSA:3.40.50.1000 185 269 1.1E-50 T 21-04-2016 IPR023214 HAD-like domain APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 PANTHER PTHR10000 13 270 3.1E-67 T 21-04-2016 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 265 7.2E-62 T 21-04-2016 IPR023214 HAD-like domain APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 15 26 - T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 SUPERFAMILY SSF56784 8 269 1.29E-63 T 21-04-2016 IPR023214 HAD-like domain APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 16 265 8.8E-58 T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 16 238 8.8E-26 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 21-04-2016 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 Gene3D G3DSA:3.30.1240.10 102 184 3.9E-14 T 21-04-2016 APL_RS08800 1ccfd65205541754f43400cb0045c2e4 270 PANTHER PTHR10000:SF29 13 270 3.1E-67 T 21-04-2016 APL_RS08975 b96c23eb102ddb3f95331b3d8b7ce8e9 219 Gene3D G3DSA:1.10.3720.10 11 213 4.8E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08975 b96c23eb102ddb3f95331b3d8b7ce8e9 219 PANTHER PTHR30614 1 218 8.8E-71 T 21-04-2016 APL_RS08975 b96c23eb102ddb3f95331b3d8b7ce8e9 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 2.6E-30 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APL_RS08975 b96c23eb102ddb3f95331b3d8b7ce8e9 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 213 4.2E-24 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08975 b96c23eb102ddb3f95331b3d8b7ce8e9 219 SUPERFAMILY SSF161098 11 199 6.67E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 3.6E-26 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 7.9E-78 T 21-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 Gene3D G3DSA:3.30.70.20 75 125 1.1E-23 T 21-04-2016 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 PANTHER PTHR11938:SF85 1 157 1.0E-76 T 21-04-2016 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 SUPERFAMILY SSF54862 1 192 1.67E-64 T 21-04-2016 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 Gene3D G3DSA:3.30.70.20 3 74 3.7E-29 T 21-04-2016 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 Gene3D G3DSA:3.30.70.20 126 188 3.7E-29 T 21-04-2016 APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 Pfam PF12800 4Fe-4S binding domain 10 24 7.3E-4 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS08895 d409fb6ec0c17c4291caa07c1ffe78ff 205 PANTHER PTHR11938 1 157 1.0E-76 T 21-04-2016 APL_RS05540 878e103ec8ee4a27ec37f74f39f6f587 198 PANTHER PTHR36571:SF1 114 198 2.9E-25 T 21-04-2016 APL_RS05540 878e103ec8ee4a27ec37f74f39f6f587 198 PANTHER PTHR36571 114 198 2.9E-25 T 21-04-2016 APL_RS05540 878e103ec8ee4a27ec37f74f39f6f587 198 SUPERFAMILY SSF101756 103 196 2.75E-25 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05540 878e103ec8ee4a27ec37f74f39f6f587 198 Pfam PF04076 Bacterial OB fold (BOF) protein 106 195 5.7E-23 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05540 878e103ec8ee4a27ec37f74f39f6f587 198 Gene3D G3DSA:2.40.50.200 105 197 8.2E-29 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PANTHER PTHR22769:SF36 1 132 2.2E-60 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PANTHER PTHR22769 1 132 2.2E-60 T 21-04-2016 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 Gene3D G3DSA:3.90.79.10 6 129 7.4E-28 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 Pfam PF00293 NUDIX domain 9 127 5.9E-20 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PRINTS PR01401 Mutator MutT protein signature 4 25 3.4E-12 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PRINTS PR01401 Mutator MutT protein signature 79 92 3.4E-12 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 SUPERFAMILY SSF55811 2 128 6.36E-32 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 5 129 4.3E-54 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PRINTS PR00502 NUDIX hydrolase family signature 35 49 6.1E-8 T 21-04-2016 IPR020476 NUDIX hydrolase APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 PRINTS PR00502 NUDIX hydrolase family signature 49 64 6.1E-8 T 21-04-2016 IPR020476 NUDIX hydrolase APL_RS01235 a1843952ddf06e08df7c0a3381372b48 132 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 ProSitePatterns PS00902 Glutamate 5-kinase signature. 204 221 - T 21-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 Gene3D G3DSA:2.30.130.10 272 361 4.6E-23 T 21-04-2016 IPR015947 PUA-like domain APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PANTHER PTHR11063 2 363 2.1E-118 T 21-04-2016 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 SMART SM00359 273 355 2.2E-19 T 21-04-2016 IPR002478 PUA domain GO:0003723 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 Hamap MF_00456 Glutamate 5-kinase [proB]. 3 255 36.284 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 Pfam PF01472 PUA domain 273 345 6.4E-21 T 21-04-2016 IPR002478 PUA domain GO:0003723 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 TIGRFAM TIGR01027 proB: glutamate 5-kinase 3 362 2.6E-144 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 SUPERFAMILY SSF88697 273 362 5.47E-22 T 21-04-2016 IPR015947 PUA-like domain APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 SUPERFAMILY SSF53633 3 252 8.51E-68 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 Pfam PF00696 Amino acid kinase family 3 232 2.6E-43 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PRINTS PR00474 Glutamate 5-kinase family signature 145 172 8.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PRINTS PR00474 Glutamate 5-kinase family signature 39 53 8.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PRINTS PR00474 Glutamate 5-kinase family signature 113 134 8.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PRINTS PR00474 Glutamate 5-kinase family signature 73 101 8.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PRINTS PR00474 Glutamate 5-kinase family signature 206 226 8.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 PIRSF PIRSF000729 1 363 7.8E-133 T 21-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS04615 fab2bf5f33db02824e317e9de135f495 363 Gene3D G3DSA:3.40.1160.10 2 255 5.9E-56 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS06965 8473bbe28be9485ea37a4e256dc2e461 371 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 3 370 1.9E-158 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APL_RS06965 8473bbe28be9485ea37a4e256dc2e461 371 PIRSF PIRSF005622 1 371 2.0E-157 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APL_RS06965 8473bbe28be9485ea37a4e256dc2e461 371 PANTHER PTHR30149 2 371 7.8E-196 T 21-04-2016 APL_RS06965 8473bbe28be9485ea37a4e256dc2e461 371 Pfam PF01924 Hydrogenase formation hypA family 20 368 3.9E-154 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APL_RS06965 8473bbe28be9485ea37a4e256dc2e461 371 PANTHER PTHR30149:SF0 2 371 7.8E-196 T 21-04-2016 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 PIRSF PIRSF001455 4 364 5.5E-106 T 21-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 SUPERFAMILY SSF56796 4 357 4.32E-117 T 21-04-2016 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 PANTHER PTHR21090 1 359 1.7E-193 T 21-04-2016 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 42.7 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 Gene3D G3DSA:1.20.1090.10 173 356 8.0E-66 T 21-04-2016 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 1.3E-118 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 Pfam PF01761 3-dehydroquinate synthase 67 325 1.7E-108 T 21-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00990 bd3df739ac01a3e29ca9bf18824670b5 366 Gene3D G3DSA:3.40.50.1970 3 172 5.1E-67 T 21-04-2016 APL_RS09650 0b430a5246e24beb920988a0122e275e 344 Gene3D G3DSA:3.30.160.60 74 112 6.1E-18 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APL_RS09650 0b430a5246e24beb920988a0122e275e 344 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 338 1.1E-119 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APL_RS09650 0b430a5246e24beb920988a0122e275e 344 PANTHER PTHR30518 1 343 1.6E-91 T 21-04-2016 APL_RS09650 0b430a5246e24beb920988a0122e275e 344 Gene3D G3DSA:3.30.160.60 305 340 8.5E-20 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APL_RS09650 0b430a5246e24beb920988a0122e275e 344 PANTHER PTHR30518:SF2 1 343 1.6E-91 T 21-04-2016 APL_RS09650 0b430a5246e24beb920988a0122e275e 344 Pfam PF02618 YceG-like family 45 330 2.1E-83 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 PRINTS PR00046 Major sigma-70 factor signature 110 123 5.0E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 PRINTS PR00046 Major sigma-70 factor signature 264 276 5.0E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 PRINTS PR00046 Major sigma-70 factor signature 283 298 5.0E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 PRINTS PR00046 Major sigma-70 factor signature 298 309 5.0E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 81 312 1.6E-31 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Pfam PF00140 Sigma-70 factor, region 1.2 49 73 1.9E-5 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 SUPERFAMILY SSF88659 223 313 4.67E-18 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 PANTHER PTHR30376 35 313 5.6E-115 T 21-04-2016 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 110 123 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Gene3D G3DSA:1.10.10.10 256 312 2.8E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 29 315 51.773 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 SUPERFAMILY SSF88946 44 155 1.96E-40 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Gene3D G3DSA:1.10.601.10 48 155 4.0E-35 T 21-04-2016 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Pfam PF04542 Sigma-70 region 2 86 155 7.8E-17 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 47 314 3.6E-125 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APL_RS09750 ff140949504441d1d5d36b7554ff366e 316 Pfam PF04545 Sigma-70, region 4 260 310 1.5E-15 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.2E-32 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 5.0E-70 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 PIRSF PIRSF029256 1 154 2.4E-68 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 Gene3D G3DSA:3.40.1280.10 1 153 2.1E-64 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 SUPERFAMILY SSF75217 2 152 5.3E-43 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS00305 af7aed8c99fd071dfb888987c006df8a 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.22 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 SUPERFAMILY SSF54211 2 130 5.31E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 199 4.9E-76 T 21-04-2016 IPR015796 Impact family, bacterial/archaeal APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 9.0E-15 T 21-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 PANTHER PTHR16301 3 201 8.3E-57 T 21-04-2016 IPR023582 Impact family APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 SUPERFAMILY SSF54980 134 201 3.52E-16 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 21-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 Gene3D G3DSA:3.30.70.240 135 204 8.8E-22 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 Pfam PF01205 Uncharacterized protein family UPF0029 17 124 1.6E-24 T 21-04-2016 IPR001498 Impact, N-terminal APL_RS08440 124bb058698d1b2d139503bc2ff925f1 208 Gene3D G3DSA:3.30.230.30 3 130 2.7E-42 T 21-04-2016 IPR001498 Impact, N-terminal APL_RS06595 110d164b0db343b7b14839f3e2d2905c 66 Pfam PF00403 Heavy-metal-associated domain 4 62 6.8E-16 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS06595 110d164b0db343b7b14839f3e2d2905c 66 Gene3D G3DSA:3.30.70.100 2 66 1.7E-22 T 21-04-2016 APL_RS06595 110d164b0db343b7b14839f3e2d2905c 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APL_RS06595 110d164b0db343b7b14839f3e2d2905c 66 SUPERFAMILY SSF55008 2 65 8.64E-19 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS10605 cf5367dcdc23d9cda07117251e1bea55 314 PANTHER PTHR22911 1 308 4.1E-93 T 21-04-2016 APL_RS10605 cf5367dcdc23d9cda07117251e1bea55 314 SUPERFAMILY SSF103481 41 142 5.23E-14 T 21-04-2016 APL_RS10605 cf5367dcdc23d9cda07117251e1bea55 314 Pfam PF00892 EamA-like transporter family 7 141 2.9E-19 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS10605 cf5367dcdc23d9cda07117251e1bea55 314 Pfam PF00892 EamA-like transporter family 157 267 4.9E-14 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS10605 cf5367dcdc23d9cda07117251e1bea55 314 PANTHER PTHR22911:SF55 1 308 4.1E-93 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 SUPERFAMILY SSF56796 465 870 7.33E-118 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Gene3D G3DSA:3.40.50.1970 464 654 2.5E-62 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Pfam PF00465 Iron-containing alcohol dehydrogenase 471 860 8.7E-115 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 729 749 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 PANTHER PTHR11496 378 871 6.7E-293 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 643 671 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Gene3D G3DSA:3.40.309.10 234 281 9.4E-28 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Gene3D G3DSA:3.40.309.10 327 419 9.4E-28 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Gene3D G3DSA:1.20.1090.10 655 869 1.0E-71 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Pfam PF00171 Aldehyde dehydrogenase family 12 275 5.5E-24 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 SUPERFAMILY SSF53720 15 276 3.27E-79 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 SUPERFAMILY SSF53720 335 467 3.27E-79 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 PANTHER PTHR11496:SF79 378 871 6.7E-293 T 21-04-2016 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 Gene3D G3DSA:3.40.605.10 13 233 1.6E-23 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APL_RS05290 3dc99bfa986d7ecd70c2b02db7d15643 871 PIRSF PIRSF000111 1 871 0.0 T 21-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 Pfam PF08402 TOBE domain 291 363 3.9E-10 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 SUPERFAMILY SSF50331 244 372 6.32E-32 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 SMART SM00382 28 211 1.9E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 Gene3D G3DSA:2.40.50.140 298 355 2.2E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 Gene3D G3DSA:3.40.50.300 3 244 1.5E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 SUPERFAMILY SSF52540 4 251 1.44E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 Pfam PF00005 ABC transporter 20 161 2.2E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 PANTHER PTHR24220 5 268 6.5E-181 T 21-04-2016 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 Gene3D G3DSA:2.40.50.100 247 297 1.8E-18 T 21-04-2016 APL_RS06455 a6ce46b51da75316f7bce1f9b5171cfb 379 PANTHER PTHR24220:SF572 5 268 6.5E-181 T 21-04-2016 APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 Gene3D G3DSA:3.10.129.10 9 152 3.8E-59 T 21-04-2016 IPR029069 HotDog domain APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 PANTHER PTHR30272 1 153 4.6E-77 T 21-04-2016 APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 Pfam PF07977 FabA-like domain 23 147 7.6E-39 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 14 152 9.3E-62 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 14 154 35.041 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APL_RS02095 8e9411d0f1f7195cc355c3f8f6140647 154 SUPERFAMILY SSF54637 16 153 4.58E-50 T 21-04-2016 IPR029069 HotDog domain APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 Gene3D G3DSA:3.20.20.70 7 243 2.7E-84 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 9.3E-135 T 21-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 PANTHER PTHR11082:SF25 1 319 3.3E-145 T 21-04-2016 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 PANTHER PTHR11082 1 319 3.3E-145 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 Gene3D G3DSA:1.10.1200.80 251 318 1.3E-15 T 21-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 PIRSF PIRSF006621 1 320 7.2E-101 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 320 47.885 T 21-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 9.5E-109 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00970 3d364e858d07cab8115c9b42ba1a528a 320 SUPERFAMILY SSF51395 10 318 6.59E-88 T 21-04-2016 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 73 295 4.9E-50 T 21-04-2016 IPR003741 LUD domain APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Gene3D G3DSA:1.10.1060.10 294 399 3.3E-13 T 21-04-2016 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 SUPERFAMILY SSF46548 274 392 1.03E-18 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Gene3D G3DSA:3.40.50.10420 66 129 4.5E-51 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Gene3D G3DSA:3.40.50.10420 190 293 4.5E-51 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 SUPERFAMILY SSF100950 65 90 4.18E-38 T 21-04-2016 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 SUPERFAMILY SSF100950 136 296 4.18E-38 T 21-04-2016 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 363 374 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 20 454 3.7E-208 T 21-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Pfam PF13183 4Fe-4S dicluster domain 310 377 2.3E-11 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS02290 a506957b0b1861ea1e6ae2054afe0e96 469 Pfam PF11870 Domain of unknown function (DUF3390) 392 469 2.9E-12 T 21-04-2016 IPR024569 4Fe-4S binding protein, C-terminal APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 Gene3D G3DSA:1.10.10.10 839 896 1.3E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 Gene3D G3DSA:1.25.40.10 451 812 4.2E-70 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 SUPERFAMILY SSF48452 449 808 2.53E-139 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 Pfam PF00196 Bacterial regulatory proteins, luxR family 840 894 5.5E-18 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 SUPERFAMILY SSF46894 832 896 3.03E-16 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 871 2.6E-9 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 871 883 2.6E-9 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 855 2.6E-9 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 SMART SM00421 838 895 8.7E-19 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 SUPERFAMILY SSF52540 29 243 2.81E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 ProSitePatterns PS00622 LuxR-type HTH domain signature. 855 882 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS06440 8d3b6f830615d19845ba72e55a47964f 905 Gene3D G3DSA:3.40.50.300 22 161 1.1E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 Gene3D G3DSA:3.40.50.1470 2 191 1.2E-72 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 21-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 1.6E-69 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 9.4E-55 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 SUPERFAMILY SSF53178 4 193 6.02E-69 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 21-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 PANTHER PTHR17224 4 194 7.1E-86 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS00165 2d75b872403f51c76cb06576cdea572d 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 36.59 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APL_RS05930 5a68d9eadc0e4282603f20ebd9f1e0a8 83 PANTHER PTHR38040:SF1 2 81 8.4E-31 T 21-04-2016 APL_RS05930 5a68d9eadc0e4282603f20ebd9f1e0a8 83 Pfam PF04380 Membrane fusogenic activity 1 77 1.3E-27 T 21-04-2016 IPR007475 Membrane fusogenic activity APL_RS05930 5a68d9eadc0e4282603f20ebd9f1e0a8 83 PANTHER PTHR38040 2 81 8.4E-31 T 21-04-2016 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 Pfam PF00347 Ribosomal protein L6 11 82 1.3E-19 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 Pfam PF00347 Ribosomal protein L6 90 164 4.1E-18 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.806 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 SUPERFAMILY SSF56053 83 177 1.56E-35 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 Gene3D G3DSA:3.90.930.12 83 177 3.7E-40 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PANTHER PTHR11655 1 176 4.4E-84 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.3E-73 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 SUPERFAMILY SSF56053 1 82 6.28E-23 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PIRSF PIRSF002162 1 177 4.8E-46 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 Gene3D G3DSA:3.90.930.12 2 82 3.5E-28 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.6E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.6E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.6E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 21-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09435 25bb4f8777367b2da7fba52a8de850d3 177 PANTHER PTHR11655:SF14 1 176 4.4E-84 T 21-04-2016 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 6 299 21.043 T 21-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 PANTHER PTHR13929:SF0 2 302 8.9E-79 T 21-04-2016 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 15 298 3.5E-118 T 21-04-2016 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 PIRSF PIRSF005355 1 302 4.0E-83 T 21-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 Pfam PF01040 UbiA prenyltransferase family 23 274 6.0E-38 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APL_RS07710 f6c0cf8522d1a2b2064d43186688c1a1 302 PANTHER PTHR13929 2 302 8.9E-79 T 21-04-2016 APL_RS01115 79b4d13d2c474c70d52fb8b798351928 449 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 52 430 4.9E-120 T 21-04-2016 IPR013397 CRISPR-associated protein Csy1 APL_RS01115 79b4d13d2c474c70d52fb8b798351928 449 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 52 437 1.1E-118 T 21-04-2016 IPR013397 CRISPR-associated protein Csy1 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 SMART SM00855 2 188 6.0E-23 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 SUPERFAMILY SSF53254 1 220 1.33E-70 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 Gene3D G3DSA:3.40.50.1240 1 225 6.7E-89 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 PANTHER PTHR11931 1 227 1.5E-137 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 42.218 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 227 1.5E-113 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 134 219 2.7E-6 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS04360 6f61bc7ffa7d1b5691281d8042b7fdca 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 122 5.2E-27 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 6.7E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PIRSF PIRSF002583 1 625 1.8E-213 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 Pfam PF00183 Hsp90 protein 220 624 1.4E-123 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 21-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 94 111 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 6 26 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 27 49 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 121 143 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 76 93 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.6E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 SUPERFAMILY SSF54211 231 486 5.08E-96 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 SUPERFAMILY SSF110942 513 624 1.05E-35 T 21-04-2016 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 SUPERFAMILY SSF55874 5 215 1.7E-66 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PANTHER PTHR11528:SF44 1 624 0.0 T 21-04-2016 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 625 32.283 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 Gene3D G3DSA:3.30.565.10 6 238 9.1E-83 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 SMART SM00387 28 183 2.7E-11 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05170 8d1cc06dc71d6cf09719067a0731818f 625 PANTHER PTHR11528 1 624 0.0 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.3E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.3E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 PANTHER PTHR30146 1 328 1.7E-172 T 21-04-2016 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 SUPERFAMILY SSF47413 1 59 1.85E-18 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 PANTHER PTHR30146:SF38 1 328 1.7E-172 T 21-04-2016 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 Gene3D G3DSA:3.40.50.2300 54 173 5.6E-42 T 21-04-2016 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 SMART SM00354 1 71 4.3E-37 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 SUPERFAMILY SSF53822 61 328 8.05E-87 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-20 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 Pfam PF13377 Periplasmic binding protein-like domain 169 328 3.1E-40 T 21-04-2016 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 Gene3D G3DSA:1.10.260.40 2 53 2.1E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08860 e6f5effd3691b8b67c767caa45b1d28a 329 Gene3D G3DSA:3.40.50.2300 174 310 9.7E-51 T 21-04-2016 APL_RS10795 65cdb5ab7544f9ca530f555cbd473d16 390 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 390 1.6E-119 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APL_RS10795 65cdb5ab7544f9ca530f555cbd473d16 390 Pfam PF02687 FtsX-like permease family 263 383 2.3E-17 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APL_RS10795 65cdb5ab7544f9ca530f555cbd473d16 390 Pfam PF12704 MacB-like periplasmic core domain 28 228 1.4E-10 T 21-04-2016 IPR025857 MacB-like periplasmic core domain APL_RS10795 65cdb5ab7544f9ca530f555cbd473d16 390 PANTHER PTHR30489:SF8 6 390 4.5E-173 T 21-04-2016 APL_RS10795 65cdb5ab7544f9ca530f555cbd473d16 390 PANTHER PTHR30489 6 390 4.5E-173 T 21-04-2016 APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 Hamap MF_00528 Septum formation protein Maf [maf]. 5 195 31.855 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 SUPERFAMILY SSF52972 2 190 4.12E-61 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 Pfam PF02545 Maf-like protein 5 190 8.5E-57 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 189 1.9E-53 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 Gene3D G3DSA:3.90.950.10 3 193 1.8E-68 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APL_RS05595 8396ed9cec6ed44b1bf25a9cc32d1108 196 PIRSF PIRSF006305 1 196 6.8E-53 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 SUPERFAMILY SSF100950 72 231 2.41E-25 T 21-04-2016 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.3E-6 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.3E-6 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 Pfam PF00455 DeoR C terminal sensor domain 73 227 1.0E-34 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 PANTHER PTHR30363 1 246 1.5E-71 T 21-04-2016 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 Gene3D G3DSA:1.10.10.10 6 55 4.2E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 PANTHER PTHR30363:SF4 1 246 1.5E-71 T 21-04-2016 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 SMART SM00420 6 58 6.7E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 Gene3D G3DSA:3.40.50.1360 75 212 7.8E-6 T 21-04-2016 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 SMART SM01134 71 229 3.2E-36 T 21-04-2016 APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 SUPERFAMILY SSF46785 6 65 3.44E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09030 c748eccf6f70f6eadc07a7531ef9aa13 248 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 7.3E-16 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 Pfam PF03222 Tryptophan/tyrosine permease family 1 391 6.2E-126 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 21-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PANTHER PTHR32195:SF17 1 400 4.5E-176 T 21-04-2016 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 3.5E-129 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PANTHER PTHR32195 1 400 4.5E-176 T 21-04-2016 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 338 357 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 183 205 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 83 103 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 317 335 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 222 241 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 283 302 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03135 bcede2962c401487eefbf67c14ef0fe0 405 PRINTS PR00166 Aromatic amino acid permease signature 149 169 2.5E-83 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS04350 28bb5c121c8ff49021e931627d92ad19 282 Pfam PF04748 Divergent polysaccharide deacetylase 33 242 3.7E-71 T 21-04-2016 IPR006837 Protein of unknown function DUF610, YibQ APL_RS04350 28bb5c121c8ff49021e931627d92ad19 282 PANTHER PTHR30105 15 260 1.3E-81 T 21-04-2016 APL_RS04350 28bb5c121c8ff49021e931627d92ad19 282 SUPERFAMILY SSF88713 29 243 6.89E-66 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APL_RS04350 28bb5c121c8ff49021e931627d92ad19 282 Gene3D G3DSA:3.20.20.370 18 254 6.8E-87 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PANTHER PTHR11817 1 478 1.3E-292 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 7.8E-132 T 21-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 SUPERFAMILY SSF51621 171 344 3.53E-87 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 SUPERFAMILY SSF51621 4 79 3.53E-87 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Gene3D G3DSA:3.20.20.60 6 76 5.0E-95 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Gene3D G3DSA:3.20.20.60 173 331 5.0E-95 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 190 204 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 300 318 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 223 249 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 250 274 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 319 335 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 275 299 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PRINTS PR01050 Pyruvate kinase family signature 63 79 9.8E-52 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Gene3D G3DSA:3.40.1380.20 332 475 2.0E-38 T 21-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 SUPERFAMILY SSF50800 74 168 3.84E-25 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 477 6.4E-169 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 21-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 SUPERFAMILY SSF52935 329 478 1.13E-36 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 475 7.9E-28 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 Gene3D G3DSA:2.40.33.10 77 172 1.0E-28 T 21-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APL_RS00960 2abab4036f68ff1d6013d4e4fa039a0f 479 PANTHER PTHR11817:SF17 1 478 1.3E-292 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PIRSF PIRSF000732 1 573 1.3E-215 T 21-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 SUPERFAMILY SSF51621 249 549 2.25E-109 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.4E-30 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.4E-30 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.4E-30 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.4E-30 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 SUPERFAMILY SSF52009 125 245 8.37E-37 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 8.5E-124 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Gene3D G3DSA:1.10.274.10 25 132 4.4E-36 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 126 2.4E-28 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 PANTHER PTHR22931 66 550 3.6E-211 T 21-04-2016 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Gene3D G3DSA:3.50.30.10 133 255 1.3E-40 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 9.8E-23 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 SUPERFAMILY SSF47831 25 143 1.57E-32 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 Gene3D G3DSA:3.20.20.60 256 569 1.9E-114 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS06940 b284212b9498e5548cc80227c1d27d67 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 2.3E-239 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 3.5E-17 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 8.4E-13 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 8.4E-13 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 8.4E-13 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 Gene3D G3DSA:3.30.70.920 60 141 2.0E-22 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 SUPERFAMILY SSF54909 68 151 2.41E-18 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 SUPERFAMILY SSF46785 5 67 9.24E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 Gene3D G3DSA:1.10.10.10 3 58 8.5E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 PANTHER PTHR30154:SF2 1 153 9.5E-60 T 21-04-2016 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 21-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 6.3E-13 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 SMART SM00344 7 114 4.2E-47 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APL_RS09775 dee275392b7467c820d5e30bb17fa989 153 PANTHER PTHR30154 1 153 9.5E-60 T 21-04-2016 APL_RS10570 f227928268242f485e16c0c251f18597 248 Pfam PF02677 Uncharacterized BCR, COG1636 46 224 1.6E-59 T 21-04-2016 IPR003828 Protein of unknown function DUF208 APL_RS10570 f227928268242f485e16c0c251f18597 248 PANTHER PTHR36701 30 245 3.3E-87 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 SUPERFAMILY SSF88659 458 532 4.86E-21 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 381 606 2.0E-37 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF03979 Sigma-70 factor, region 1.1 6 82 7.1E-25 T 21-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF04539 Sigma-70 region 3 464 539 2.0E-29 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF04546 Sigma-70, non-essential region 139 354 1.1E-60 T 21-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Gene3D G3DSA:1.10.601.10 112 454 1.3E-125 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 SUPERFAMILY SSF88946 115 452 4.19E-97 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 617 1.6E-121 T 21-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF04542 Sigma-70 region 2 385 454 1.7E-21 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 SUPERFAMILY SSF88659 515 617 2.07E-26 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 618 45.018 T 21-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PANTHER PTHR30603:SF0 2 152 4.1E-239 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PANTHER PTHR30603:SF0 332 618 4.1E-239 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF04545 Sigma-70, region 4 553 606 2.5E-19 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 578 604 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.0E-12 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PANTHER PTHR30603 2 152 4.1E-239 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PANTHER PTHR30603 332 618 4.1E-239 T 21-04-2016 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PRINTS PR00046 Major sigma-70 factor signature 433 441 3.1E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PRINTS PR00046 Major sigma-70 factor signature 409 422 3.1E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PRINTS PR00046 Major sigma-70 factor signature 578 593 3.1E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PRINTS PR00046 Major sigma-70 factor signature 593 604 3.1E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 PRINTS PR00046 Major sigma-70 factor signature 557 569 3.1E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Gene3D G3DSA:1.10.10.10 550 618 6.0E-33 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS07780 3b4cf9f5a7949f50d66dd07f6a02c8c4 619 Gene3D G3DSA:1.10.10.10 458 509 7.7E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Gene3D G3DSA:3.30.310.50 369 443 1.5E-17 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 6.1E-19 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Gene3D G3DSA:3.40.120.10 251 367 9.1E-31 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 PANTHER PTHR22573 1 442 6.8E-178 T 21-04-2016 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.444 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 SUPERFAMILY SSF53738 2 181 3.3E-48 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 PANTHER PTHR22573:SF15 1 442 6.8E-178 T 21-04-2016 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 365 3.1E-31 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Gene3D G3DSA:3.40.120.10 176 250 8.3E-28 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 SUPERFAMILY SSF53738 258 364 9.03E-28 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 SUPERFAMILY SSF55957 357 443 3.53E-22 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 3.7E-45 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 SUPERFAMILY SSF53738 156 256 1.84E-30 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 3.4E-194 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.3E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.3E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.3E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 9.4E-16 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS07675 12ee3acf12740b8b3a8acfd0e9a5194c 444 Gene3D G3DSA:3.40.120.10 4 152 1.8E-45 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 Hamap MF_00300 Chorismate synthase [aroC]. 10 360 37.839 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 ProSitePatterns PS00789 Chorismate synthase signature 3. 327 343 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 TIGRFAM TIGR00033 aroC: chorismate synthase 10 356 2.4E-143 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 SUPERFAMILY SSF103263 4 359 1.31E-148 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 PIRSF PIRSF001456 3 360 5.1E-146 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 Pfam PF01264 Chorismate synthase 10 353 2.1E-143 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 PANTHER PTHR21085 2 359 3.0E-220 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03890 32038a08fb2bc1309a2df339797a6d20 360 Gene3D G3DSA:3.60.150.10 9 358 1.3E-160 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 PANTHER PTHR30400 34 252 8.0E-93 T 21-04-2016 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 Pfam PF00912 Transglycosylase 76 241 2.1E-48 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 SUPERFAMILY SSF53955 61 245 3.66E-56 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 Gene3D G3DSA:1.10.3810.10 73 243 1.5E-57 T 21-04-2016 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 PANTHER PTHR30400:SF0 34 252 8.0E-93 T 21-04-2016 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 43 244 3.0E-80 T 21-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APL_RS02450 b15032542a555cedbfe89913c05bdfce 253 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 24 247 39.621 T 21-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.2E-20 T 21-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.907 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 SUPERFAMILY SSF51735 5 160 2.89E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 Gene3D G3DSA:3.40.50.720 2 160 8.7E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 PANTHER PTHR11645 1 272 5.7E-108 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 PANTHER PTHR11645:SF0 1 272 5.7E-108 T 21-04-2016 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.1E-74 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 PIRSF PIRSF000193 3 271 1.1E-75 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 SUPERFAMILY SSF48179 162 271 1.0E-30 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 Gene3D G3DSA:1.10.3730.10 162 268 1.6E-31 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 3.5E-31 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS00825 beac13d67c30e46e87b45175d7db50f5 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 246 - T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APL_RS03580 8386db2f23fc61f38311e492ae9dab61 134 Pfam PF04241 Protein of unknown function (DUF423) 19 113 1.7E-26 T 21-04-2016 IPR006696 Protein of unknown function DUF423 APL_RS03580 8386db2f23fc61f38311e492ae9dab61 134 PANTHER PTHR10584:SF191 5 66 1.0E-16 T 21-04-2016 APL_RS03580 8386db2f23fc61f38311e492ae9dab61 134 PANTHER PTHR10584 5 66 1.0E-16 T 21-04-2016 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 PANTHER PTHR33175:SF5 1 91 1.2E-40 T 21-04-2016 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 29.093 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 4.3E-41 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 PANTHER PTHR33175 1 91 1.2E-40 T 21-04-2016 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 Gene3D G3DSA:4.10.520.10 1 91 1.2E-30 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 SMART SM00411 1 91 2.5E-38 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 SUPERFAMILY SSF47729 1 91 7.36E-27 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS03845 ad882dcdd8b3fd85c1b107238256620b 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-26 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS10640 bc18bb546519324da64b045abbca8528 445 Gene3D G3DSA:3.40.50.300 227 378 1.3E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10640 bc18bb546519324da64b045abbca8528 445 SUPERFAMILY SSF52540 81 365 8.1E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10640 bc18bb546519324da64b045abbca8528 445 PANTHER PTHR24031:SF334 6 440 4.3E-211 T 21-04-2016 APL_RS10640 bc18bb546519324da64b045abbca8528 445 PANTHER PTHR24031 6 440 4.3E-211 T 21-04-2016 APL_RS10640 bc18bb546519324da64b045abbca8528 445 Gene3D G3DSA:3.40.50.300 3 226 2.0E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10640 bc18bb546519324da64b045abbca8528 445 Pfam PF00270 DEAD/DEAH box helicase 32 196 3.9E-45 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS10640 bc18bb546519324da64b045abbca8528 445 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APL_RS10640 bc18bb546519324da64b045abbca8528 445 SMART SM00487 27 229 7.1E-56 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS10640 bc18bb546519324da64b045abbca8528 445 SMART SM00490 266 347 4.9E-32 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS10640 bc18bb546519324da64b045abbca8528 445 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 8 433 48.862 T 21-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 APL_RS10640 bc18bb546519324da64b045abbca8528 445 Pfam PF00271 Helicase conserved C-terminal domain 241 347 1.1E-28 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 PANTHER PTHR11758 1 130 9.3E-64 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 Pfam PF00410 Ribosomal protein S8 5 129 8.1E-48 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.95 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 Gene3D G3DSA:3.30.1370.30 2 72 2.2E-27 T 21-04-2016 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 Gene3D G3DSA:3.30.1490.10 74 129 1.5E-28 T 21-04-2016 APL_RS09430 d7044cf5a060193dd89384ffd84dd448 130 SUPERFAMILY SSF56047 2 129 3.01E-46 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APL_RS06750 478f814f844f4452985809bdaddfd768 424 Gene3D G3DSA:3.65.10.10 21 221 1.3E-72 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS06750 478f814f844f4452985809bdaddfd768 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 408 1.4E-123 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS06750 478f814f844f4452985809bdaddfd768 424 SUPERFAMILY SSF55205 1 419 5.89E-146 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APL_RS06750 478f814f844f4452985809bdaddfd768 424 Gene3D G3DSA:3.65.10.10 222 418 1.9E-63 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS06750 478f814f844f4452985809bdaddfd768 424 PANTHER PTHR21090 1 420 4.9E-213 T 21-04-2016 APL_RS06750 478f814f844f4452985809bdaddfd768 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 45.906 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS06750 478f814f844f4452985809bdaddfd768 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 5.6E-185 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS02715 d3b6a3669c7a32c89baab2a4d9f3ac78 1143 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 169 241 1.4E-19 T 21-04-2016 IPR013491 Caudovirus, tape measure, N-terminal APL_RS02715 d3b6a3669c7a32c89baab2a4d9f3ac78 1143 Pfam PF06120 Tail length tape measure protein 412 509 3.7E-10 T 21-04-2016 IPR009302 Tail length tape measure APL_RS02900 d596d6f0170570adbce996bea840f0c1 295 PANTHER PTHR35007:SF1 67 295 1.3E-48 T 21-04-2016 APL_RS02900 d596d6f0170570adbce996bea840f0c1 295 PANTHER PTHR35007 67 295 1.3E-48 T 21-04-2016 APL_RS02900 d596d6f0170570adbce996bea840f0c1 295 Pfam PF00482 Type II secretion system (T2SS), protein F 128 252 9.3E-21 T 21-04-2016 IPR018076 Type II secretion system F domain APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 Gene3D G3DSA:3.40.50.1000 97 196 1.3E-34 T 21-04-2016 IPR023214 HAD-like domain APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 Gene3D G3DSA:3.40.50.1000 7 25 1.3E-34 T 21-04-2016 IPR023214 HAD-like domain APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 Gene3D G3DSA:1.10.150.240 27 84 1.9E-5 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 11 192 1.2E-56 T 21-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.3E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.3E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.3E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 PANTHER PTHR18901 7 194 9.9E-57 T 21-04-2016 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 PANTHER PTHR18901:SF29 7 194 9.9E-57 T 21-04-2016 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 187 2.8E-12 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 188 3.3E-24 T 21-04-2016 IPR023214 HAD-like domain APL_RS00835 5c4ff35bd5835bdf04103d911b464a14 201 SUPERFAMILY SSF56784 11 194 2.27E-43 T 21-04-2016 IPR023214 HAD-like domain APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 SMART SM00363 11 74 1.6E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 PIRSF PIRSF016821 8 134 5.8E-46 T 21-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 SUPERFAMILY SSF55174 10 104 1.02E-29 T 21-04-2016 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 PANTHER PTHR11079 6 64 2.8E-29 T 21-04-2016 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 PANTHER PTHR11079 111 117 2.8E-29 T 21-04-2016 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 Gene3D G3DSA:3.10.290.10 9 105 2.2E-38 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 PANTHER PTHR11079:SF70 6 64 2.8E-29 T 21-04-2016 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 PANTHER PTHR11079:SF70 111 117 2.8E-29 T 21-04-2016 APL_RS06890 39c3d9132b2123c0b7f052894dfee87a 134 Pfam PF01479 S4 domain 11 57 2.3E-13 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 3.1E-30 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 SUPERFAMILY SSF55021 304 380 5.34E-22 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Pfam PF00696 Amino acid kinase family 2 284 1.6E-39 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Gene3D G3DSA:3.40.50.720 463 635 2.6E-66 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 SUPERFAMILY SSF55347 614 797 6.34E-53 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 SUPERFAMILY SSF51735 463 636 5.91E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Gene3D G3DSA:3.30.360.10 636 791 8.8E-57 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 21-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 PIRSF PIRSF000727 1 816 0.0 T 21-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 PANTHER PTHR21499 1 471 2.9E-163 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 PANTHER PTHR21499:SF1 1 471 2.9E-163 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Pfam PF01842 ACT domain 324 370 4.1E-9 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 SUPERFAMILY SSF55021 387 470 6.49E-21 T 21-04-2016 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.6E-138 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 SUPERFAMILY SSF53633 1 297 3.84E-68 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Pfam PF00742 Homoserine dehydrogenase 614 810 2.8E-49 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Pfam PF13840 ACT domain 397 454 3.3E-8 T 21-04-2016 IPR027795 GATS-like ACT domain APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Gene3D G3DSA:3.40.1160.10 1 49 1.4E-61 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS01280 ee2d000151165cbfe7c92a005e60e115 818 Gene3D G3DSA:3.40.1160.10 111 297 1.4E-61 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 Pfam PF10124 Mu-like prophage major head subunit gpT 446 519 4.9E-5 T 21-04-2016 IPR018774 Bacteriophage Mu, GpT APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 Pfam PF10124 Mu-like prophage major head subunit gpT 524 581 1.9E-5 T 21-04-2016 IPR018774 Bacteriophage Mu, GpT APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 Pfam PF00574 Clp protease 12 187 9.4E-38 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 PANTHER PTHR10381:SF23 54 248 9.7E-91 T 21-04-2016 APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 SUPERFAMILY SSF52096 11 188 9.23E-49 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 PRINTS PR00127 Clp protease catalytic subunit P signature 164 183 1.6E-9 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 1.6E-9 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 1.6E-9 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 PANTHER PTHR10381 54 248 9.7E-91 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APL_RS02670 b1ad10f8556d2cfc87d702c893c82e99 664 Gene3D G3DSA:3.90.226.10 11 196 4.0E-47 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 PANTHER PTHR19384:SF77 141 171 9.5E-96 T 21-04-2016 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 PANTHER PTHR19384:SF77 1 120 9.5E-96 T 21-04-2016 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 SUPERFAMILY SSF52218 4 170 1.59E-50 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 3.8E-69 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 Gene3D G3DSA:3.40.50.360 1 169 1.3E-60 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 PIRSF PIRSF038996 1 172 3.8E-65 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 PANTHER PTHR19384 141 171 9.5E-96 T 21-04-2016 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 PANTHER PTHR19384 1 120 9.5E-96 T 21-04-2016 APL_RS06370 e6d8bfbb9bf111b0456ffa41125dd5b9 174 Pfam PF00258 Flavodoxin 6 160 4.1E-29 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APL_RS05365 99daa603e7e4a997eccdcc4c3c0d3351 293 PANTHER PTHR22916:SF34 1 267 1.3E-55 T 21-04-2016 APL_RS05365 99daa603e7e4a997eccdcc4c3c0d3351 293 Gene3D G3DSA:3.90.550.10 2 213 1.3E-37 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS05365 99daa603e7e4a997eccdcc4c3c0d3351 293 Pfam PF00535 Glycosyl transferase family 2 3 118 5.9E-27 T 21-04-2016 IPR001173 Glycosyltransferase 2-like APL_RS05365 99daa603e7e4a997eccdcc4c3c0d3351 293 PANTHER PTHR22916 1 267 1.3E-55 T 21-04-2016 APL_RS05365 99daa603e7e4a997eccdcc4c3c0d3351 293 SUPERFAMILY SSF53448 1 214 2.16E-42 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 PANTHER PTHR32328:SF0 1 460 3.4E-207 T 21-04-2016 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 Pfam PF12390 Selenocysteine synthase N terminal 5 44 1.8E-5 T 21-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 461 226.535 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 459 6.5E-182 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 Pfam PF03841 L-seryl-tRNA selenium transferase 82 447 3.3E-170 T 21-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 Gene3D G3DSA:3.40.640.10 133 316 4.2E-32 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 PANTHER PTHR32328 1 460 3.4E-207 T 21-04-2016 APL_RS08295 aba4b8940f735ffd91e3fa0a4c0d05bc 461 SUPERFAMILY SSF53383 80 459 1.21E-44 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 Pfam PF02163 Peptidase family M50 6 425 9.5E-81 T 21-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 Gene3D G3DSA:2.30.42.10 90 173 1.2E-5 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 Gene3D G3DSA:2.30.42.10 205 281 1.4E-14 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 SMART SM00228 205 271 1.0E-9 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 PANTHER PTHR22939 170 437 5.6E-66 T 21-04-2016 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 PANTHER PTHR22939:SF78 170 437 5.6E-66 T 21-04-2016 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 435 5.5E-123 T 21-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 SUPERFAMILY SSF50156 84 169 4.72E-6 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 SUPERFAMILY SSF50156 187 281 3.02E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS02115 735e2d0eae49a9854745edbff0a90d72 437 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 206 252 2.5E-7 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Gene3D G3DSA:3.40.50.300 6 293 2.1E-103 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Gene3D G3DSA:3.30.70.870 411 485 1.5E-39 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SUPERFAMILY SSF50447 271 409 8.39E-35 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.9E-30 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Pfam PF00679 Elongation factor G C-terminus 607 692 3.0E-27 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Pfam PF14492 Elongation Factor G, domain II 409 483 2.0E-35 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115:SF66 308 698 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115:SF66 3 184 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115:SF66 261 289 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SMART SM00889 485 605 1.3E-72 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SUPERFAMILY SSF54980 407 485 1.55E-25 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 111.1 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 3.9E-67 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SMART SM00838 607 694 6.0E-51 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SUPERFAMILY SSF54211 484 606 2.53E-40 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Pfam PF03764 Elongation factor G, domain IV 484 604 9.6E-47 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115 308 698 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115 3 184 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 PANTHER PTHR23115 261 289 0.0 T 21-04-2016 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Gene3D G3DSA:3.30.70.240 605 699 2.9E-29 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SUPERFAMILY SSF52540 6 287 3.45E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 SUPERFAMILY SSF54980 607 697 4.68E-26 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Gene3D G3DSA:3.30.230.10 489 604 1.1E-46 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.4E-17 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07400 02dac0328ad6ff6d65af53296de76e94 701 Gene3D G3DSA:2.40.30.10 310 410 3.3E-38 T 21-04-2016 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 Gene3D G3DSA:3.40.30.10 172 243 3.5E-26 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 Pfam PF00462 Glutaredoxin 174 232 8.9E-16 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 167 243 1.2E-38 T 21-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 PANTHER PTHR10430:SF19 8 169 3.4E-96 T 21-04-2016 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 SUPERFAMILY SSF52833 7 241 3.53E-44 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 Pfam PF08534 Redoxin 7 160 8.4E-32 T 21-04-2016 IPR013740 Redoxin GO:0016491 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 PRINTS PR00160 Glutaredoxin signature 215 228 1.0E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 PRINTS PR00160 Glutaredoxin signature 229 242 1.0E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 PRINTS PR00160 Glutaredoxin signature 174 192 1.0E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 PANTHER PTHR10430 8 169 3.4E-96 T 21-04-2016 APL_RS07815 47ae5ca17c6f50780c5f92675ff7b8f8 244 Gene3D G3DSA:3.40.30.10 7 164 1.1E-62 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 PANTHER PTHR30134 54 267 2.1E-121 T 21-04-2016 APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 PANTHER PTHR30134:SF2 54 267 2.1E-121 T 21-04-2016 APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 Gene3D G3DSA:3.40.50.300 92 251 2.1E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 SUPERFAMILY SSF52540 70 266 8.33E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 86 247 9.9E-37 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APL_RS06960 ac54e68a51b9fff7f6aeeaba43b4c52d 269 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 58 268 8.1E-88 T 21-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 APL_RS10170 985e50d485155f39adaadac48c98658e 474 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 473 3.5E-215 T 21-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 APL_RS10170 985e50d485155f39adaadac48c98658e 474 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS10170 985e50d485155f39adaadac48c98658e 474 PANTHER PTHR11819:SF125 2 474 1.5E-254 T 21-04-2016 APL_RS10170 985e50d485155f39adaadac48c98658e 474 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 433 6.6E-99 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS10170 985e50d485155f39adaadac48c98658e 474 Pfam PF00474 Sodium:solute symporter family 36 433 1.1E-121 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS10170 985e50d485155f39adaadac48c98658e 474 PANTHER PTHR11819 2 474 1.5E-254 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 32 257 2.0E-88 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 257 1.7E-102 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 Gene3D G3DSA:3.40.50.150 31 254 2.4E-59 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 PANTHER PTHR10108:SF864 9 258 2.4E-170 T 21-04-2016 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 SUPERFAMILY SSF53335 26 256 2.32E-51 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 PANTHER PTHR10108 9 258 2.4E-170 T 21-04-2016 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 23 257 39.214 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 165 179 - T 21-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS10510 823ef303344174a1cdfcf2b9d3ae7c44 258 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 43 58 - T 21-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 SUPERFAMILY SSF101967 427 508 2.09E-8 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Pfam PF03895 YadA-like C-terminal region 519 597 1.4E-26 T 21-04-2016 IPR005594 YadA-like, C-terminal APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:2.150.10.10 474 502 1.6E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:2.150.10.10 16 64 2.0E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 PANTHER PTHR35843:SF2 474 597 3.0E-20 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:3.30.1300.30 503 597 1.8E-36 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 SUPERFAMILY SSF101967 15 79 1.7E-8 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:1.20.5.170 301 378 2.0E-5 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:1.20.5.170 65 84 1.1E-4 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Gene3D G3DSA:1.20.5.170 178 218 1.1E-4 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 SUPERFAMILY SSF54523 497 597 1.41E-30 T 21-04-2016 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 485 505 3.3E-9 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 51 74 1.9E-8 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10860 0c6c51ae1a30c7ca7f9f0b66e4b1a160 597 PANTHER PTHR35843 474 597 3.0E-20 T 21-04-2016 APL_RS08485 f56286feac84b7a5dabefa4514b91a38 374 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 320 344 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APL_RS08485 f56286feac84b7a5dabefa4514b91a38 374 PANTHER PTHR30474 1 366 2.7E-167 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APL_RS08485 f56286feac84b7a5dabefa4514b91a38 374 Pfam PF01098 Cell cycle protein 18 363 1.2E-119 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APL_RS08485 f56286feac84b7a5dabefa4514b91a38 374 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 363 1.2E-134 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APL_RS08485 f56286feac84b7a5dabefa4514b91a38 374 PANTHER PTHR30474:SF1 1 366 2.7E-167 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 SUPERFAMILY SSF52833 1 163 1.46E-41 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 37.947 T 21-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 Pfam PF08534 Redoxin 19 162 1.4E-23 T 21-04-2016 IPR013740 Redoxin GO:0016491 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 PANTHER PTHR10681:SF81 3 165 6.3E-48 T 21-04-2016 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 PANTHER PTHR10681 3 165 6.3E-48 T 21-04-2016 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 21-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 APL_RS07855 8e099f45c1ffe83837bfe2faecf1b325 166 Gene3D G3DSA:3.40.30.10 3 165 2.9E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS03425 d317400c6a51d04929a184f913f9fea7 141 Gene3D G3DSA:3.40.50.620 1 138 2.7E-29 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS03425 d317400c6a51d04929a184f913f9fea7 141 Pfam PF00582 Universal stress protein family 1 137 2.5E-19 T 21-04-2016 IPR006016 UspA GO:0006950 APL_RS03425 d317400c6a51d04929a184f913f9fea7 141 SUPERFAMILY SSF52402 1 137 2.77E-31 T 21-04-2016 APL_RS03425 d317400c6a51d04929a184f913f9fea7 141 PIRSF PIRSF006276 1 140 1.2E-47 T 21-04-2016 IPR006015 Universal stress protein A APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 SMART SM00382 23 206 1.9E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 PANTHER PTHR24220:SF439 1 207 4.4E-83 T 21-04-2016 APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 5 208 1.9E-92 T 21-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 Gene3D G3DSA:3.40.50.300 11 209 1.4E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 Pfam PF00005 ABC transporter 19 156 2.2E-39 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 PANTHER PTHR24220 1 207 4.4E-83 T 21-04-2016 APL_RS06925 b4af689af338637f8d77aaac2f6fa96e 214 SUPERFAMILY SSF52540 5 209 1.22E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 98 121 - T 21-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 SUPERFAMILY SSF63411 56 286 2.93E-47 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Gene3D G3DSA:3.30.830.10 55 286 7.1E-62 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Gene3D G3DSA:3.30.830.10 296 530 1.6E-52 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Gene3D G3DSA:3.30.830.10 773 983 2.0E-47 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 PANTHER PTHR11851 56 418 1.6E-208 T 21-04-2016 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 PANTHER PTHR11851 435 951 1.6E-208 T 21-04-2016 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 SUPERFAMILY SSF63411 528 754 1.12E-32 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 PANTHER PTHR11851:SF135 56 418 1.6E-208 T 21-04-2016 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 PANTHER PTHR11851:SF135 435 951 1.6E-208 T 21-04-2016 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Pfam PF16187 Middle or third domain of peptidase_M16 424 701 3.8E-48 T 21-04-2016 IPR032632 Peptidase M16, middle/third domain APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 SUPERFAMILY SSF63411 770 983 1.66E-42 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Pfam PF05193 Peptidase M16 inactive domain 708 883 3.4E-7 T 21-04-2016 IPR007863 Peptidase M16, C-terminal APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Pfam PF05193 Peptidase M16 inactive domain 240 419 3.6E-17 T 21-04-2016 IPR007863 Peptidase M16, C-terminal APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 SUPERFAMILY SSF63411 288 526 1.51E-59 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Pfam PF00675 Insulinase (Peptidase family M16) 78 196 8.7E-34 T 21-04-2016 IPR011765 Peptidase M16, N-terminal APL_RS10010 36eeeaaeeb1902e75bd7dea680d73be8 986 Gene3D G3DSA:3.30.830.10 531 772 3.4E-42 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS05430 9f6717985b2edb8271b8e6e58a22a2f9 289 Pfam PF01435 Peptidase family M48 79 288 3.4E-44 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APL_RS05430 9f6717985b2edb8271b8e6e58a22a2f9 289 PANTHER PTHR10120 1 289 4.5E-100 T 21-04-2016 APL_RS05430 9f6717985b2edb8271b8e6e58a22a2f9 289 Hamap MF_00188 Protease HtpX [htpX]. 2 289 25.76 T 21-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 APL_RS05430 9f6717985b2edb8271b8e6e58a22a2f9 289 PANTHER PTHR10120:SF19 1 289 4.5E-100 T 21-04-2016 APL_RS05430 9f6717985b2edb8271b8e6e58a22a2f9 289 Gene3D G3DSA:3.30.2010.10 73 161 8.7E-33 T 21-04-2016 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 PANTHER PTHR11933:SF10 21 389 6.4E-207 T 21-04-2016 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 SUPERFAMILY SSF52402 18 319 4.85E-55 T 21-04-2016 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 Gene3D G3DSA:2.40.30.10 306 387 1.5E-32 T 21-04-2016 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 PANTHER PTHR11933 21 389 6.4E-207 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 Gene3D G3DSA:2.30.30.280 237 304 5.9E-30 T 21-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 30 384 9.6E-155 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 Gene3D G3DSA:3.40.50.620 26 235 3.6E-95 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 30 385 39.81 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APL_RS00815 9d0d332a1a55163d40b97640d83758c3 389 Pfam PF03054 tRNA methyl transferase 30 384 1.3E-142 T 21-04-2016 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 PANTHER PTHR21057 1 284 1.2E-223 T 21-04-2016 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 SUPERFAMILY SSF51569 3 278 2.11E-107 T 21-04-2016 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 PANTHER PTHR21057:SF6 1 284 1.2E-223 T 21-04-2016 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 8.9E-126 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 Pfam PF00793 DAHP synthetase I family 10 275 8.5E-68 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 Gene3D G3DSA:3.20.20.70 16 281 6.9E-110 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS10805 b55e6b73142957b4591309579c582fcb 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.437 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 PANTHER PTHR26402:SF292 2 123 8.7E-77 T 21-04-2016 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 PANTHER PTHR26402:SF292 139 241 8.7E-77 T 21-04-2016 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 Pfam PF00072 Response regulator receiver domain 4 113 4.3E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 SUPERFAMILY SSF46894 137 239 1.76E-25 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 SMART SM00448 2 112 1.9E-46 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 SUPERFAMILY SSF52172 1 120 5.83E-42 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS03290 427c21bf0aaec5bed143231062030c80 242 Gene3D G3DSA:1.10.10.10 138 240 1.6E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03290 427c21bf0aaec5bed143231062030c80 242 Gene3D G3DSA:3.40.50.2300 1 120 8.5E-42 T 21-04-2016 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 PANTHER PTHR26402 2 123 8.7E-77 T 21-04-2016 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 PANTHER PTHR26402 139 241 8.7E-77 T 21-04-2016 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 3.9E-20 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS03290 427c21bf0aaec5bed143231062030c80 242 SMART SM00862 162 238 2.4E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS04075 72e7a3336d68167835bf136909ea8cdf 228 PANTHER PTHR30249 1 228 3.6E-78 T 21-04-2016 APL_RS04075 72e7a3336d68167835bf136909ea8cdf 228 Pfam PF04172 LrgB-like family 9 221 3.8E-65 T 21-04-2016 IPR007300 CidB/LrgB family APL_RS04075 72e7a3336d68167835bf136909ea8cdf 228 PANTHER PTHR30249:SF5 1 228 3.6E-78 T 21-04-2016 APL_RS04075 72e7a3336d68167835bf136909ea8cdf 228 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 223 4.9E-76 T 21-04-2016 IPR005261 Conserved hypothetical protein CHP00659 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SUPERFAMILY SSF54631 95 203 4.8E-27 T 21-04-2016 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.4E-160 T 21-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SMART SM01240 7 473 0.0 T 21-04-2016 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 PANTHER PTHR11911:SF6 300 486 2.2E-247 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 PANTHER PTHR11911:SF6 1 282 2.2E-247 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 21-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 PANTHER PTHR11911 300 486 2.2E-247 T 21-04-2016 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 PANTHER PTHR11911 1 282 2.2E-247 T 21-04-2016 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 PIRSF PIRSF000130 1 487 2.6E-198 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 Gene3D G3DSA:3.20.20.70 2 485 2.3E-197 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 Pfam PF00571 CBS domain 95 138 7.3E-10 T 21-04-2016 IPR000644 CBS domain APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 Pfam PF00571 CBS domain 149 203 1.1E-6 T 21-04-2016 IPR000644 CBS domain APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SMART SM00116 96 144 1.0E-10 T 21-04-2016 IPR000644 CBS domain APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SMART SM00116 158 206 2.0E-8 T 21-04-2016 IPR000644 CBS domain APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 5.9E-195 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.033 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SUPERFAMILY SSF51412 217 477 3.92E-125 T 21-04-2016 APL_RS03115 2de79a06fa3eedb1f69bc0980d05def7 487 SUPERFAMILY SSF51412 2 90 3.92E-125 T 21-04-2016 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 SMART SM00729 137 366 1.7E-53 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 Gene3D G3DSA:2.40.50.140 381 443 8.4E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 Pfam PF04055 Radical SAM superfamily 143 324 1.3E-28 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 441 1.5E-184 T 21-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 Gene3D G3DSA:3.80.30.20 135 378 1.8E-74 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 SUPERFAMILY SSF102114 122 371 1.83E-51 T 21-04-2016 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 8 441 1.1E-106 T 21-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 5 443 60.61 T 21-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 PANTHER PTHR11918:SF57 1 442 5.5E-232 T 21-04-2016 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 21-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 Pfam PF00919 Uncharacterized protein family UPF0004 8 91 1.5E-20 T 21-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APL_RS08675 7940e11affefde9de46a2fa33f39ed16 443 PANTHER PTHR11918 1 442 5.5E-232 T 21-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 PIRSF PIRSF500136 1 423 3.2E-144 T 21-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 294 3.2E-26 T 21-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 Gene3D G3DSA:3.40.50.720 239 421 7.5E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 SUPERFAMILY SSF51735 6 200 1.36E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 421 2.3E-16 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 SUPERFAMILY SSF48179 207 300 2.55E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 417 5.9E-116 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 SUPERFAMILY SSF52413 313 421 4.19E-23 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 PANTHER PTHR11374 2 420 1.4E-171 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 Gene3D G3DSA:3.40.50.720 2 228 7.2E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 189 4.6E-54 T 21-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 PIRSF PIRSF000124 5 422 9.4E-76 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 SMART SM00984 325 422 8.6E-23 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APL_RS08240 1fa7f5d4220d39442b22678aadd5fead 423 PANTHER PTHR11374:SF4 2 420 1.4E-171 T 21-04-2016 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 Gene3D G3DSA:3.40.50.720 408 541 5.3E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 Pfam PF00999 Sodium/hydrogen exchanger family 19 382 6.4E-78 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 21 293 5.0E-88 T 21-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 Pfam PF02254 TrkA-N domain 414 526 3.0E-22 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 PANTHER PTHR16254 9 568 0.0 T 21-04-2016 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 PANTHER PTHR16254:SF22 9 568 0.0 T 21-04-2016 APL_RS05500 aa9c40e3e80a89b00a4872c1438f6db4 621 SUPERFAMILY SSF51735 412 541 6.57E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 PANTHER PTHR11662:SF141 377 474 5.1E-211 T 21-04-2016 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 PANTHER PTHR11662:SF141 1 359 5.1E-211 T 21-04-2016 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 PIRSF PIRSF002808 5 479 1.3E-138 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 PANTHER PTHR11662 377 474 5.1E-211 T 21-04-2016 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 PANTHER PTHR11662 1 359 5.1E-211 T 21-04-2016 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 447 7.3E-131 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 470 5.5E-245 T 21-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 Pfam PF07690 Major Facilitator Superfamily 34 429 7.0E-39 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 SUPERFAMILY SSF103473 13 467 4.32E-72 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 Gene3D G3DSA:1.20.1250.20 259 472 1.2E-43 T 21-04-2016 APL_RS01940 a5c7ab54d0002f6a7a6c01eaddda5c06 481 Gene3D G3DSA:1.20.1250.20 26 237 1.9E-44 T 21-04-2016 APL_RS03440 1046e006759768b132d1560bf1e04eba 214 SUPERFAMILY SSF52833 7 90 2.28E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS03440 1046e006759768b132d1560bf1e04eba 214 Gene3D G3DSA:3.40.30.10 7 101 5.5E-30 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS03440 1046e006759768b132d1560bf1e04eba 214 Gene3D G3DSA:1.20.1050.10 102 205 2.4E-14 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS03440 1046e006759768b132d1560bf1e04eba 214 SUPERFAMILY SSF47616 82 206 1.35E-21 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS03440 1046e006759768b132d1560bf1e04eba 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 3.1E-17 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APL_RS03440 1046e006759768b132d1560bf1e04eba 214 PANTHER PTHR11260 9 202 5.4E-110 T 21-04-2016 APL_RS03440 1046e006759768b132d1560bf1e04eba 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 195 2.3E-8 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal APL_RS03440 1046e006759768b132d1560bf1e04eba 214 PANTHER PTHR11260:SF44 9 202 5.4E-110 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 252 1.8E-38 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SUPERFAMILY SSF117023 450 579 6.8E-44 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SMART SM00493 260 331 7.2E-22 T 21-04-2016 IPR006171 Toprim domain APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SUPERFAMILY SSF56731 119 428 6.8E-109 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 TIGRFAM TIGR01391 dnaG: DNA primase 5 419 9.9E-148 T 21-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SUPERFAMILY SSF57783 5 100 6.63E-36 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Gene3D G3DSA:3.40.1360.10 242 367 2.7E-46 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SMART SM00766 453 578 1.8E-48 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 SMART SM00400 36 90 2.2E-37 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 PANTHER PTHR30313 3 579 4.1E-161 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Gene3D G3DSA:1.20.50.20 369 426 4.6E-25 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Gene3D G3DSA:3.90.980.10 119 241 2.9E-41 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Pfam PF13155 Toprim-like 263 350 5.9E-15 T 21-04-2016 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Pfam PF01807 CHC2 zinc finger 6 100 5.5E-41 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Gene3D G3DSA:3.90.580.10 3 101 4.1E-40 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Hamap MF_00974 DNA primase [dnaG]. 4 579 29.116 T 21-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Pfam PF08278 DNA primase DnaG DnaB-binding 454 577 3.2E-36 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Pfam PF10410 DnaB-helicase binding domain of primase 370 423 1.7E-12 T 21-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 Gene3D G3DSA:1.10.860.10 440 579 7.7E-53 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APL_RS07775 be2489c011dcb2019b28db1e44096a50 580 PIRSF PIRSF002811 2 577 6.3E-141 T 21-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APL_RS09325 11935aeb253a122da790c70823c42576 290 Pfam PF00480 ROK family 3 288 1.9E-84 T 21-04-2016 IPR000600 ROK family APL_RS09325 11935aeb253a122da790c70823c42576 290 Gene3D G3DSA:3.30.420.40 133 270 1.7E-43 T 21-04-2016 APL_RS09325 11935aeb253a122da790c70823c42576 290 PANTHER PTHR18964:SF140 1 288 3.9E-140 T 21-04-2016 APL_RS09325 11935aeb253a122da790c70823c42576 290 SUPERFAMILY SSF53067 1 289 1.19E-56 T 21-04-2016 APL_RS09325 11935aeb253a122da790c70823c42576 290 PANTHER PTHR18964 1 288 3.9E-140 T 21-04-2016 APL_RS09325 11935aeb253a122da790c70823c42576 290 Gene3D G3DSA:3.30.420.40 2 132 8.5E-29 T 21-04-2016 APL_RS08410 20b990cd08fb34b35b0f28b52d7df31b 385 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 25 385 9.2E-176 T 21-04-2016 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0006859|GO:0009276|GO:0015542 APL_RS08410 20b990cd08fb34b35b0f28b52d7df31b 385 Pfam PF02706 Chain length determinant protein 31 176 1.2E-5 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APL_RS07915 a06593bc82822f6bf5d64588886c3866 260 Gene3D G3DSA:3.30.420.10 93 251 1.6E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS07915 a06593bc82822f6bf5d64588886c3866 260 SUPERFAMILY SSF53098 94 253 6.98E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS07915 a06593bc82822f6bf5d64588886c3866 260 Pfam PF13276 HTH-like domain 23 76 2.7E-15 T 21-04-2016 IPR025948 HTH-like domain APL_RS07915 a06593bc82822f6bf5d64588886c3866 260 PANTHER PTHR32552 1 260 3.9E-72 T 21-04-2016 APL_RS07915 a06593bc82822f6bf5d64588886c3866 260 Pfam PF00665 Integrase core domain 99 214 1.3E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552 298 441 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Gene3D G3DSA:2.40.170.20 166 227 2.0E-49 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Gene3D G3DSA:2.40.170.20 274 347 2.0E-49 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Gene3D G3DSA:2.40.170.20 590 752 2.0E-49 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Gene3D G3DSA:2.40.170.20 391 551 2.0E-49 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552:SF15 298 441 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Gene3D G3DSA:2.170.130.10 62 165 4.6E-28 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552 468 754 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552 18 230 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 3.5E-20 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552:SF15 468 754 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 PANTHER PTHR32552:SF15 18 230 3.1E-71 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 TIGRFAM TIGR01776 TonB-tbp-lbp: TonB-dependent lactoferrin and transferrin receptors 6 754 3.3E-235 T 21-04-2016 IPR010948 TonB-dependent lactoferrin/transferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 SUPERFAMILY SSF56935 400 511 1.74E-60 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 SUPERFAMILY SSF56935 61 228 1.74E-60 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 SUPERFAMILY SSF56935 292 343 1.74E-60 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 SUPERFAMILY SSF56935 582 752 1.74E-60 T 21-04-2016 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 752 1.2E-144 T 21-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APL_RS01260 77c9785785fb323c14d0a68427b17467 755 Pfam PF00593 TonB dependent receptor 639 751 2.0E-8 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 PANTHER PTHR24029 2 673 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SUPERFAMILY SSF52540 6 418 3.04E-139 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:4.10.860.10 630 671 6.1E-16 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 6 669 44.036 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 8 667 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SMART SM00490 463 549 2.6E-19 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SUPERFAMILY SSF52540 40 85 4.59E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SUPERFAMILY SSF52540 462 584 4.59E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:3.40.50.300 391 411 1.2E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:3.40.50.300 281 341 1.2E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:3.40.50.300 10 92 1.2E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Pfam PF00271 Helicase conserved C-terminal domain 438 548 5.9E-19 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 100 1.4E-8 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SMART SM00487 12 428 1.6E-28 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:3.30.2060.10 162 236 7.3E-10 T 21-04-2016 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Pfam PF02151 UvrB/uvrC motif 634 668 1.6E-8 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 SUPERFAMILY SSF46600 626 670 8.37E-11 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Pfam PF12344 Ultra-violet resistance protein B 555 596 2.9E-22 T 21-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APL_RS03485 8eba549a550eedc456751e76571aaa32 673 Gene3D G3DSA:3.40.50.300 422 585 2.8E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 SUPERFAMILY SSF69618 1 249 6.02E-43 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 Gene3D G3DSA:3.40.50.10090 124 246 5.9E-8 T 21-04-2016 APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 PANTHER PTHR38042:SF1 1 244 3.8E-52 T 21-04-2016 APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 PANTHER PTHR38042 1 244 3.8E-52 T 21-04-2016 APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 243 6.3E-29 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APL_RS05280 3fc3f8a8a101750f940ccd0b87f9cf7a 254 Gene3D G3DSA:3.40.50.10090 6 117 4.4E-6 T 21-04-2016 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 Gene3D G3DSA:1.20.200.10 120 389 7.9E-90 T 21-04-2016 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 Gene3D G3DSA:1.10.40.30 390 445 2.4E-33 T 21-04-2016 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 SUPERFAMILY SSF48557 10 454 5.81E-107 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 4.7E-151 T 21-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.3E-17 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.3E-17 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.3E-17 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.3E-17 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 Gene3D G3DSA:1.10.275.10 1 119 3.3E-50 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 Pfam PF00206 Lyase 14 312 1.5E-73 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PANTHER PTHR11444:SF17 5 455 0.0 T 21-04-2016 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 6.8E-53 T 21-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APL_RS04320 bacde24e3f3c11016ee032a317820bc3 455 PANTHER PTHR11444 5 455 0.0 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09230 08b3e5cdb4321c36128f64292f7473b0 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 6.2E-20 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APL_RS09230 08b3e5cdb4321c36128f64292f7473b0 130 SUPERFAMILY SSF54593 4 129 1.34E-30 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS09230 08b3e5cdb4321c36128f64292f7473b0 130 Gene3D G3DSA:3.10.180.10 10 129 1.3E-31 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 718 1.1E-231 T 21-04-2016 IPR010019 Integral membrane protein, YccS APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 PANTHER PTHR30509:SF8 3 723 4.5E-216 T 21-04-2016 APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 Pfam PF12805 FUSC-like inner membrane protein yccS 68 344 6.7E-100 T 21-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 718 3.9E-213 T 21-04-2016 IPR010020 Integral membrane protein, YccS/YhfK APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 SUPERFAMILY SSF103473 390 531 1.7E-7 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 SUPERFAMILY SSF103473 36 178 1.7E-7 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 Pfam PF13515 Fusaric acid resistance protein-like 405 528 9.7E-25 T 21-04-2016 APL_RS07895 d1e5a97e02c28df3c4ffc1137a14fa0c 724 PANTHER PTHR30509 3 723 4.5E-216 T 21-04-2016 APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 Gene3D G3DSA:3.90.1150.10 280 404 2.8E-40 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 PANTHER PTHR11751 9 405 1.1E-180 T 21-04-2016 APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 Pfam PF00155 Aminotransferase class I and II 36 393 1.4E-48 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 SUPERFAMILY SSF53383 6 402 8.11E-94 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 Gene3D G3DSA:3.40.640.10 51 279 3.7E-66 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS05450 4cdc5de94ba2be1ca87a0605de23beb5 405 PANTHER PTHR11751:SF303 9 405 1.1E-180 T 21-04-2016 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 227 337 3.5E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Gene3D G3DSA:1.10.287.130 107 175 3.3E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SUPERFAMILY SSF47226 497 613 1.7E-16 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Gene3D G3DSA:3.30.565.10 186 335 5.4E-44 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 1.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 292 1.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 1.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 278 1.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SUPERFAMILY SSF52172 352 474 6.26E-30 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Gene3D G3DSA:3.40.50.2300 350 475 1.5E-31 T 21-04-2016 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Gene3D G3DSA:1.10.287.970 1 89 9.1E-33 T 21-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SMART SM00387 226 339 1.6E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Pfam PF01627 Hpt domain 522 609 2.6E-7 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PIRSF PIRSF003182 105 616 1.2E-198 T 21-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Pfam PF00072 Response regulator receiver domain 355 468 1.7E-19 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SUPERFAMILY SSF55874 168 335 1.31E-43 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SMART SM00388 114 179 9.0E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SMART SM00448 353 469 6.5E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PANTHER PTHR24423:SF476 88 510 6.8E-156 T 21-04-2016 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 SUPERFAMILY SSF47384 105 179 5.3E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Pfam PF00512 His Kinase A (phospho-acceptor) domain 115 178 3.8E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 Gene3D G3DSA:1.20.120.160 509 614 7.0E-21 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APL_RS04885 e3f86bd8e0eaf2b06d5426697e17951f 616 PANTHER PTHR24423 88 510 6.8E-156 T 21-04-2016 APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 PANTHER PTHR30333:SF1 1 192 6.7E-92 T 21-04-2016 APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 SUPERFAMILY SSF48695 8 186 1.4E-59 T 21-04-2016 IPR011031 Multihaem cytochrome APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 1 183 1.3E-98 T 21-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 13 182 8.8E-72 T 21-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 PANTHER PTHR30333 1 192 6.7E-92 T 21-04-2016 APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 Gene3D G3DSA:1.10.3820.10 13 182 5.6E-25 T 21-04-2016 APL_RS07530 73f0a8d82182a8135322c039b4bb3370 204 PIRSF PIRSF000013 1 192 2.2E-93 T 21-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 PANTHER PTHR10168 1 81 7.7E-30 T 21-04-2016 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 Pfam PF00462 Glutaredoxin 3 69 7.5E-13 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 PANTHER PTHR10168:SF85 1 81 7.7E-30 T 21-04-2016 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 2.9E-45 T 21-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 PRINTS PR00160 Glutaredoxin signature 66 79 7.5E-11 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 PRINTS PR00160 Glutaredoxin signature 3 21 7.5E-11 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 PRINTS PR00160 Glutaredoxin signature 52 65 7.5E-11 T 21-04-2016 IPR014025 Glutaredoxin subgroup APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 SUPERFAMILY SSF52833 3 81 4.81E-18 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS00270 c9208a13adbd9d33683a02c2907cb4db 87 Gene3D G3DSA:3.40.30.10 1 79 3.9E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 Pfam PF00294 pfkB family carbohydrate kinase 1 298 3.2E-68 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PANTHER PTHR10584 1 302 9.4E-97 T 21-04-2016 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 Gene3D G3DSA:3.40.1190.20 1 302 1.1E-87 T 21-04-2016 IPR029056 Ribokinase-like APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PANTHER PTHR10584:SF166 1 302 9.4E-97 T 21-04-2016 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 302 2.3E-111 T 21-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PRINTS PR00990 Ribokinase signature 109 122 1.9E-34 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PRINTS PR00990 Ribokinase signature 33 52 1.9E-34 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PRINTS PR00990 Ribokinase signature 177 192 1.9E-34 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PRINTS PR00990 Ribokinase signature 6 27 1.9E-34 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 PRINTS PR00990 Ribokinase signature 221 232 1.9E-34 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS08885 5831d2f05dd991fee60bcb32c6de4369 303 SUPERFAMILY SSF53613 1 302 4.37E-78 T 21-04-2016 IPR029056 Ribokinase-like APL_RS07930 6ed091e5f176a323587f2e7afc8f8504 140 PANTHER PTHR23091 7 138 6.5E-34 T 21-04-2016 APL_RS07930 6ed091e5f176a323587f2e7afc8f8504 140 Pfam PF13673 Acetyltransferase (GNAT) domain 41 138 7.9E-17 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS07930 6ed091e5f176a323587f2e7afc8f8504 140 Gene3D G3DSA:3.40.630.30 2 138 1.1E-43 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS07930 6ed091e5f176a323587f2e7afc8f8504 140 SUPERFAMILY SSF55729 2 139 8.33E-35 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS07930 6ed091e5f176a323587f2e7afc8f8504 140 PANTHER PTHR23091:SF275 7 138 6.5E-34 T 21-04-2016 APL_RS03510 d390a5e695f9e94c6f1d392fd8c5a5af 196 SUPERFAMILY SSF52141 9 190 4.18E-24 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS03510 d390a5e695f9e94c6f1d392fd8c5a5af 196 Gene3D G3DSA:3.40.470.10 10 189 1.2E-11 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 46 217 8.0E-57 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 PANTHER PTHR21600 161 228 6.4E-87 T 21-04-2016 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 PANTHER PTHR21600 34 143 6.4E-87 T 21-04-2016 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 77 91 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 SUPERFAMILY SSF55120 30 229 1.25E-48 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 PANTHER PTHR21600:SF23 161 228 6.4E-87 T 21-04-2016 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 PANTHER PTHR21600:SF23 34 143 6.4E-87 T 21-04-2016 APL_RS00465 c35a285f3dfe45266543ab3d756bb6a8 232 Pfam PF00849 RNA pseudouridylate synthase 42 187 5.2E-17 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 Hamap MF_00551 Uridine kinase [udk]. 7 215 38.629 T 21-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 TIGRFAM TIGR00235 udk: uridine kinase 7 214 1.6E-88 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 SUPERFAMILY SSF52540 11 207 7.86E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 145 155 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 89 104 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 181 194 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 44 55 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 10 27 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PRINTS PR00988 Uridine kinase signature 159 170 4.2E-35 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 PANTHER PTHR10285 6 217 7.3E-83 T 21-04-2016 APL_RS04370 c523a10605e7bfa348304f8218e25405 217 Gene3D G3DSA:3.40.50.300 4 207 1.8E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04370 c523a10605e7bfa348304f8218e25405 217 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 12 201 1.7E-43 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 Pfam PF01545 Cation efflux family 16 206 4.7E-35 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 Gene3D G3DSA:1.20.1510.10 10 206 1.1E-37 T 21-04-2016 IPR027469 Cation efflux protein transmembrane domain APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 287 3.6E-63 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 PANTHER PTHR11562 1 296 5.4E-97 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 8.3E-22 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 PANTHER PTHR11562:SF55 1 296 5.4E-97 T 21-04-2016 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 SUPERFAMILY SSF160240 209 287 3.27E-22 T 21-04-2016 APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 Gene3D G3DSA:3.30.70.1350 207 287 3.0E-25 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APL_RS03170 fb2dd40739b73146653bbb1d972da9e5 307 SUPERFAMILY SSF161111 7 207 4.58E-48 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 31 935 4.4E-200 T 21-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 918 935 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 155 1.3E-15 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552 489 935 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552 1 226 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552 322 428 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Gene3D G3DSA:2.170.130.10 54 161 9.3E-24 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 SUPERFAMILY SSF56935 316 367 3.05E-72 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 SUPERFAMILY SSF56935 587 935 3.05E-72 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 SUPERFAMILY SSF56935 421 534 3.05E-72 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 SUPERFAMILY SSF56935 31 224 3.05E-72 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Pfam PF00593 TonB dependent receptor 645 934 2.5E-23 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552:SF15 489 935 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552:SF15 1 226 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 PANTHER PTHR32552:SF15 322 428 3.7E-100 T 21-04-2016 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 TIGRFAM TIGR01776 TonB-tbp-lbp: TonB-dependent lactoferrin and transferrin receptors 2 935 0.0 T 21-04-2016 IPR010948 TonB-dependent lactoferrin/transferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Gene3D G3DSA:2.40.170.20 296 369 8.9E-87 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Gene3D G3DSA:2.40.170.20 574 935 8.9E-87 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Gene3D G3DSA:2.40.170.20 162 223 8.9E-87 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS08325 2360d68daa96076ea6bf9fb53689effb 935 Gene3D G3DSA:2.40.170.20 412 538 8.9E-87 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 Pfam PF00572 Ribosomal protein L13 15 138 2.3E-57 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 PIRSF PIRSF002181 1 142 6.4E-52 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.8E-69 T 21-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 PANTHER PTHR11545 1 142 5.4E-81 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 21-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 Gene3D G3DSA:3.90.1180.10 3 141 2.2E-65 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 SUPERFAMILY SSF52161 1 140 1.05E-60 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APL_RS03150 a530cc86ae658ab4911595b2a4631672 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.676 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 431 1.5E-97 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 21-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 SUPERFAMILY SSF53623 17 285 3.36E-87 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 Gene3D G3DSA:3.40.1190.10 17 285 3.7E-85 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 Gene3D G3DSA:3.90.190.20 289 433 5.0E-32 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 PANTHER PTHR11136 17 432 1.7E-115 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 PANTHER PTHR11136:SF0 17 432 1.7E-115 T 21-04-2016 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 SUPERFAMILY SSF53244 307 433 1.59E-24 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 PIRSF PIRSF001563 9 434 1.4E-109 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APL_RS03305 6b50d80bcac436ed87c0de6b6df0c2cc 434 Pfam PF08245 Mur ligase middle domain 55 243 8.7E-14 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 PIRSF PIRSF018296 1 305 8.5E-125 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 Hamap MF_00611 Protein FdhE [fdhE]. 3 304 44.493 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 PANTHER PTHR37689 2 305 1.9E-83 T 21-04-2016 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 Pfam PF04216 Protein involved in formate dehydrogenase formation 19 302 4.2E-108 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 PANTHER PTHR37689:SF1 2 305 1.9E-83 T 21-04-2016 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 302 1.6E-96 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 Gene3D G3DSA:3.90.1670.10 23 303 1.1E-94 T 21-04-2016 IPR024064 FdhE-like APL_RS04675 1db0513ac81aa38062ff568688765d6b 305 SUPERFAMILY SSF144020 22 302 6.41E-93 T 21-04-2016 IPR024064 FdhE-like APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 2 335 1.2E-76 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 164 2.8E-41 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 184 330 6.1E-22 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 73 86 - T 21-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 PANTHER PTHR13326 2 332 1.3E-70 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 335 27.785 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS10225 09701867d2d6a7237247146995b8ec0b 337 SUPERFAMILY SSF55120 3 332 2.73E-102 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 390 3.2E-72 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PANTHER PTHR10309 1 392 5.9E-96 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PANTHER PTHR10309:SF0 1 392 5.9E-96 T 21-04-2016 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Gene3D G3DSA:2.60.120.10 296 390 5.0E-14 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Pfam PF01238 Phosphomannose isomerase type I 2 365 1.1E-65 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Gene3D G3DSA:2.60.120.10 8 140 1.7E-58 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Gene3D G3DSA:2.60.120.10 246 281 1.7E-58 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 21-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Gene3D G3DSA:1.10.441.10 141 239 7.2E-15 T 21-04-2016 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 Gene3D G3DSA:1.10.441.10 282 295 7.2E-15 T 21-04-2016 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 SUPERFAMILY SSF51182 2 393 7.34E-99 T 21-04-2016 IPR011051 RmlC-like cupin domain APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 33 48 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 5 23 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 1.6E-50 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS07380 5dde8b1e1c199e49efd89596747eabb0 401 PIRSF PIRSF001480 1 401 8.0E-107 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 PANTHER PTHR24220 6 224 1.1E-122 T 21-04-2016 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 Pfam PF00005 ABC transporter 24 172 5.5E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.8E-108 T 21-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 Gene3D G3DSA:3.40.50.300 4 224 5.2E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 PANTHER PTHR24220:SF111 6 224 1.1E-122 T 21-04-2016 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 SUPERFAMILY SSF52540 4 224 7.4E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS10790 99fa827dec268c4e71999a99b0bdca78 226 SMART SM00382 33 221 1.2E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 Pfam PF02348 Cytidylyltransferase 5 223 1.3E-68 T 21-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 SUPERFAMILY SSF53448 1 249 5.18E-64 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 PANTHER PTHR21485 1 249 2.0E-119 T 21-04-2016 APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 Gene3D G3DSA:3.90.550.10 1 249 2.1E-82 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 243 3.0E-116 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 PANTHER PTHR21485:SF4 1 249 2.0E-119 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS00450 782a06887c7a60b972422b9fe91228d4 250 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 45.795 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 SUPERFAMILY SSF81330 13 124 1.31E-35 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 128 1.0E-46 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 PANTHER PTHR30266 1 129 1.4E-46 T 21-04-2016 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.9E-11 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.9E-11 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.9E-11 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 129 26.059 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 21-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 128 9.1E-46 T 21-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APL_RS08455 4e01186fc34fe29496bf75cd9b26a354 129 PANTHER PTHR30266:SF2 1 129 1.4E-46 T 21-04-2016 APL_RS00130 7387df4551e30520c70d0005040a689a 467 SUPERFAMILY SSF52540 258 464 2.89E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00130 7387df4551e30520c70d0005040a689a 467 Pfam PF00005 ABC transporter 21 171 4.2E-23 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00130 7387df4551e30520c70d0005040a689a 467 Pfam PF00005 ABC transporter 283 418 8.1E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00130 7387df4551e30520c70d0005040a689a 467 PANTHER PTHR24220:SF298 5 390 1.1E-88 T 21-04-2016 APL_RS00130 7387df4551e30520c70d0005040a689a 467 Gene3D G3DSA:3.40.50.300 2 244 1.0E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00130 7387df4551e30520c70d0005040a689a 467 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS00130 7387df4551e30520c70d0005040a689a 467 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS00130 7387df4551e30520c70d0005040a689a 467 SMART SM00382 290 466 1.1E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00130 7387df4551e30520c70d0005040a689a 467 SMART SM00382 29 228 2.5E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00130 7387df4551e30520c70d0005040a689a 467 Gene3D G3DSA:3.40.50.300 257 463 5.8E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00130 7387df4551e30520c70d0005040a689a 467 PANTHER PTHR24220 5 390 1.1E-88 T 21-04-2016 APL_RS00130 7387df4551e30520c70d0005040a689a 467 SUPERFAMILY SSF52540 3 254 1.89E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06915 4166357455411318d293c119c1791a2d 315 SUPERFAMILY SSF53633 1 304 4.58E-69 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 261 276 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 208 223 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 3.0E-59 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PIRSF PIRSF000723 1 306 8.5E-110 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PANTHER PTHR30409:SF1 1 307 7.6E-142 T 21-04-2016 APL_RS06915 4166357455411318d293c119c1791a2d 315 Pfam PF00696 Amino acid kinase family 1 286 1.1E-20 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS06915 4166357455411318d293c119c1791a2d 315 Gene3D G3DSA:3.40.1160.10 1 305 2.1E-92 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS06915 4166357455411318d293c119c1791a2d 315 TIGRFAM TIGR00746 arcC: carbamate kinase 1 305 2.3E-117 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APL_RS06915 4166357455411318d293c119c1791a2d 315 PANTHER PTHR30409 1 307 7.6E-142 T 21-04-2016 APL_RS00420 a37b560a44c8b00f0744d7ae2fef28e3 108 SMART SM00450 8 103 1.6E-15 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS00420 a37b560a44c8b00f0744d7ae2fef28e3 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 3 107 32.645 T 21-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APL_RS00420 a37b560a44c8b00f0744d7ae2fef28e3 108 Gene3D G3DSA:3.40.250.10 5 107 1.1E-26 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS00420 a37b560a44c8b00f0744d7ae2fef28e3 108 Pfam PF00581 Rhodanese-like domain 9 99 6.9E-13 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS00420 a37b560a44c8b00f0744d7ae2fef28e3 108 SUPERFAMILY SSF52821 4 106 4.85E-27 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Gene3D G3DSA:3.20.14.10 343 588 2.3E-127 T 21-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 PANTHER PTHR37840:SF1 1 588 4.2E-244 T 21-04-2016 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Pfam PF02952 L-fucose isomerase, C-terminal domain 388 552 4.7E-54 T 21-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Pfam PF07882 L-fucose isomerase, second N-terminal domain 177 356 1.6E-91 T 21-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Hamap MF_01254 L-fucose isomerase [fucI]. 5 588 70.375 T 21-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 SUPERFAMILY SSF50443 358 588 4.71E-124 T 21-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 PANTHER PTHR37840 1 588 4.2E-244 T 21-04-2016 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 TIGRFAM TIGR01089 fucI: L-fucose isomerase 10 588 0.0 T 21-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Pfam PF07881 L-fucose isomerase, first N-terminal domain 10 176 2.4E-80 T 21-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Gene3D G3DSA:3.40.275.10 178 342 3.1E-84 T 21-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 SUPERFAMILY SSF53743 8 357 1.29E-153 T 21-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APL_RS08940 974ee56b5dac0e5511181482d4b3fd32 588 Gene3D G3DSA:3.40.50.1070 8 177 6.3E-94 T 21-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 PIRSF PIRSF028788 2 213 1.3E-32 T 21-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 Pfam PF04993 TfoX N-terminal domain 13 107 4.7E-19 T 21-04-2016 IPR007076 TfoX, N-terminal APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 SUPERFAMILY SSF159894 7 108 8.37E-20 T 21-04-2016 APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 Gene3D G3DSA:1.10.150.20 120 199 8.3E-14 T 21-04-2016 APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 Pfam PF04994 TfoX C-terminal domain 120 197 3.7E-21 T 21-04-2016 IPR007077 TfoX, C-terminal APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 PANTHER PTHR36121:SF1 1 214 2.8E-20 T 21-04-2016 APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 Gene3D G3DSA:3.30.1460.30 4 108 3.8E-20 T 21-04-2016 IPR007076 TfoX, N-terminal APL_RS09350 4fbc763c91a2c66d18f633884af75603 218 PANTHER PTHR36121 1 214 2.8E-20 T 21-04-2016 APL_RS05755 f34cd6a9f7580c63e445e62982e30920 367 PANTHER PTHR33529:SF2 2 364 3.2E-113 T 21-04-2016 APL_RS05755 f34cd6a9f7580c63e445e62982e30920 367 PANTHER PTHR33529 2 364 3.2E-113 T 21-04-2016 APL_RS05755 f34cd6a9f7580c63e445e62982e30920 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.2E-115 T 21-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APL_RS05755 f34cd6a9f7580c63e445e62982e30920 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 6.7E-71 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 160 178 9.1E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 65 81 9.1E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 89 105 9.1E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 ProSitePatterns PS00819 Dps protein family signature 2. 91 105 - T 21-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PANTHER PTHR30295:SF10 23 184 2.9E-41 T 21-04-2016 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 Gene3D G3DSA:1.20.1260.10 24 182 2.8E-40 T 21-04-2016 IPR012347 Ferritin-related APL_RS07880 231605f1e3004b6f24174e776b0db969 189 SUPERFAMILY SSF47240 26 182 1.3E-42 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PIRSF PIRSF005900 22 188 1.5E-47 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 PANTHER PTHR30295 23 184 2.9E-41 T 21-04-2016 APL_RS07880 231605f1e3004b6f24174e776b0db969 189 Pfam PF00210 Ferritin-like domain 45 184 3.3E-23 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APL_RS04725 8e66680978e877fcf8d49d18ffa23fa6 234 SUPERFAMILY SSF56112 82 232 2.29E-18 T 21-04-2016 IPR011009 Protein kinase-like domain APL_RS04725 8e66680978e877fcf8d49d18ffa23fa6 234 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 34.996 T 21-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 APL_RS04725 8e66680978e877fcf8d49d18ffa23fa6 234 Gene3D G3DSA:3.30.200.20 70 160 4.4E-4 T 21-04-2016 APL_RS04725 8e66680978e877fcf8d49d18ffa23fa6 234 Gene3D G3DSA:1.10.510.10 161 215 8.4E-13 T 21-04-2016 APL_RS04725 8e66680978e877fcf8d49d18ffa23fa6 234 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 1.0E-62 T 21-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 APL_RS04505 be10a77663b436dfd45fdee806a8b128 103 PANTHER PTHR39586 1 103 2.0E-27 T 21-04-2016 APL_RS04505 be10a77663b436dfd45fdee806a8b128 103 Gene3D G3DSA:1.20.1440.40 2 98 4.9E-33 T 21-04-2016 IPR023376 YqcC-like domain APL_RS04505 be10a77663b436dfd45fdee806a8b128 103 PIRSF PIRSF006257 1 103 3.0E-33 T 21-04-2016 IPR007384 Protein of unknown function UCP006257 APL_RS04505 be10a77663b436dfd45fdee806a8b128 103 Pfam PF04287 tRNA pseudouridine synthase C 5 94 7.9E-31 T 21-04-2016 IPR023376 YqcC-like domain APL_RS04505 be10a77663b436dfd45fdee806a8b128 103 SUPERFAMILY SSF158452 2 102 4.05E-34 T 21-04-2016 IPR023376 YqcC-like domain APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 SUPERFAMILY SSF102114 46 422 1.18E-75 T 21-04-2016 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 Gene3D G3DSA:3.80.30.20 55 285 4.9E-32 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 15 425 2.7E-161 T 21-04-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 Pfam PF06228 Haem utilisation ChuX/HutX 464 594 9.1E-29 T 21-04-2016 IPR010413 Heme utilization carrier protein HutX-like APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 446 601 5.5E-61 T 21-04-2016 IPR010413 Heme utilization carrier protein HutX-like APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 PANTHER PTHR13932:SF5 1 432 2.4E-88 T 21-04-2016 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 SMART SM00729 52 272 1.8E-39 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 SUPERFAMILY SSF144064 439 602 1.57E-46 T 21-04-2016 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 Gene3D G3DSA:3.40.1570.10 420 603 5.8E-76 T 21-04-2016 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 PANTHER PTHR13932 1 432 2.4E-88 T 21-04-2016 APL_RS08045 83e55e63a7e3b414e147fa7fcabd9889 605 Pfam PF04055 Radical SAM superfamily 57 220 8.2E-20 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS05645 3e53b8c6c21ecdcdaa8d4563c6773d24 471 PIRSF PIRSF006060 1 470 2.0E-55 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05645 3e53b8c6c21ecdcdaa8d4563c6773d24 471 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 4.3E-152 T 21-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APL_RS05645 3e53b8c6c21ecdcdaa8d4563c6773d24 471 PANTHER PTHR11785 2 465 5.1E-181 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05645 3e53b8c6c21ecdcdaa8d4563c6773d24 471 Pfam PF13520 Amino acid permease 6 418 1.5E-75 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APL_RS05645 3e53b8c6c21ecdcdaa8d4563c6773d24 471 PANTHER PTHR11785:SF77 2 465 5.1E-181 T 21-04-2016 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 PANTHER PTHR30307 2 357 1.3E-174 T 21-04-2016 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 351 1.5E-159 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 351 46.333 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 Gene3D G3DSA:2.40.10.240 64 147 4.9E-18 T 21-04-2016 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 Pfam PF02547 Queuosine biosynthesis protein 3 350 2.2E-130 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 Gene3D G3DSA:3.40.1780.10 184 350 6.9E-99 T 21-04-2016 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 Gene3D G3DSA:3.40.1780.10 3 62 6.9E-99 T 21-04-2016 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 SUPERFAMILY SSF111337 3 350 2.49E-135 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03985 2aa16dbcc3ed6b3950740d6df6c9650a 361 PANTHER PTHR30307:SF0 2 357 1.3E-174 T 21-04-2016 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.567 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.0E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.0E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.0E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 PANTHER PTHR33343 1 65 3.4E-27 T 21-04-2016 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 SUPERFAMILY SSF143034 2 64 2.35E-22 T 21-04-2016 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-23 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 Pfam PF01632 Ribosomal protein L35 2 59 1.1E-22 T 21-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS01145 e798522e4169d453c8a367f7b689e3da 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 21-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 SUPERFAMILY SSF54821 107 206 1.7E-41 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.4E-42 T 21-04-2016 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 Pfam PF07650 KH domain 38 111 1.4E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 Gene3D G3DSA:3.30.300.20 18 107 6.8E-34 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 SUPERFAMILY SSF54814 2 106 3.92E-37 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.1E-101 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 SMART SM00322 60 125 3.3E-8 T 21-04-2016 IPR004087 K Homology domain GO:0003676 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 PANTHER PTHR11760 2 220 5.8E-148 T 21-04-2016 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.529 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 PANTHER PTHR11760:SF19 2 220 5.8E-148 T 21-04-2016 APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 21-04-2016 IPR018280 Ribosomal protein S3, conserved site APL_RS09390 50b5ac1c1aa6676f693c6a13629325e7 235 Gene3D G3DSA:3.30.1140.32 108 207 2.1E-48 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 PIRSF PIRSF000390 1 380 4.7E-111 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 Gene3D G3DSA:3.40.640.10 2 249 2.2E-77 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 PANTHER PTHR30244:SF14 1 379 6.3E-226 T 21-04-2016 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 SUPERFAMILY SSF53383 2 377 9.76E-101 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 Gene3D G3DSA:3.90.1150.10 253 378 1.9E-19 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 PANTHER PTHR30244 1 379 6.3E-226 T 21-04-2016 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 3 376 5.4E-206 T 21-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 APL_RS08230 37c24e4a8be16e5c1d01a6fb7109a41a 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 372 8.4E-87 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APL_RS08540 71e85aeb851f6802df64c2cebcd87e90 186 SUPERFAMILY SSF158682 41 184 1.09E-22 T 21-04-2016 IPR029024 TerB-like APL_RS08540 71e85aeb851f6802df64c2cebcd87e90 186 Gene3D G3DSA:1.10.3680.10 40 184 2.8E-25 T 21-04-2016 IPR029024 TerB-like APL_RS08540 71e85aeb851f6802df64c2cebcd87e90 186 Pfam PF04391 Protein of unknown function (DUF533) 22 184 2.4E-43 T 21-04-2016 IPR007486 Inner membrane protein YebE APL_RS00190 d533c7b9aeaa0915512c683799bd4a73 198 Gene3D G3DSA:3.10.180.10 1 194 4.3E-67 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS00190 d533c7b9aeaa0915512c683799bd4a73 198 Pfam PF06185 YecM protein 12 194 1.9E-67 T 21-04-2016 IPR010393 Protein of unknown function DUF991 APL_RS00190 d533c7b9aeaa0915512c683799bd4a73 198 PANTHER PTHR37519:SF1 4 194 8.4E-62 T 21-04-2016 APL_RS00190 d533c7b9aeaa0915512c683799bd4a73 198 PANTHER PTHR37519 4 194 8.4E-62 T 21-04-2016 APL_RS00190 d533c7b9aeaa0915512c683799bd4a73 198 SUPERFAMILY SSF54593 1 194 4.44E-66 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 Gene3D G3DSA:3.30.70.1300 44 131 1.7E-23 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 Pfam PF02622 Uncharacterized ACR, COG1678 14 175 4.0E-45 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 Gene3D G3DSA:3.40.1740.10 132 177 1.1E-31 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 Gene3D G3DSA:3.40.1740.10 3 42 1.1E-31 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 SUPERFAMILY SSF143456 2 177 1.11E-58 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 PANTHER PTHR30327:SF1 1 181 5.9E-54 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 PANTHER PTHR30327 1 181 5.9E-54 T 21-04-2016 APL_RS01185 d691d821e2e49f3102044a6de98ad316 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 3 186 34.917 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 PIRSF PIRSF002741 1 544 1.3E-123 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 PANTHER PTHR30290 1 535 6.5E-203 T 21-04-2016 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 3.8E-106 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 Gene3D G3DSA:3.90.76.10 49 228 9.9E-50 T 21-04-2016 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 Gene3D G3DSA:3.10.105.10 298 514 2.3E-71 T 21-04-2016 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 PANTHER PTHR30290:SF14 1 535 6.5E-203 T 21-04-2016 APL_RS10650 430e1b9cffac90ee10dbc0c6bd05b781 545 SUPERFAMILY SSF53850 40 540 7.37E-157 T 21-04-2016 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 PANTHER PTHR22777 1 390 4.6E-126 T 21-04-2016 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 Pfam PF00571 CBS domain 248 295 2.3E-4 T 21-04-2016 IPR000644 CBS domain APL_RS07345 0bc2f3a90810a20840505984904d208f 390 Gene3D G3DSA:3.10.580.10 159 287 4.9E-14 T 21-04-2016 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 Gene3D G3DSA:3.30.465.10 288 388 1.6E-23 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 SUPERFAMILY SSF56176 309 389 2.18E-19 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 Pfam PF01595 Domain of unknown function DUF21 1 149 3.1E-36 T 21-04-2016 IPR002550 Domain of unknown function DUF21 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 SMART SM01091 311 389 2.6E-23 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS07345 0bc2f3a90810a20840505984904d208f 390 SUPERFAMILY SSF54631 167 303 2.65E-23 T 21-04-2016 APL_RS07345 0bc2f3a90810a20840505984904d208f 390 Pfam PF03471 Transporter associated domain 313 388 2.7E-17 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS07345 0bc2f3a90810a20840505984904d208f 390 PANTHER PTHR22777:SF3 1 390 4.6E-126 T 21-04-2016 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 SUPERFAMILY SSF46946 131 223 1.18E-28 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 SMART SM01232 130 222 3.8E-43 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 3.5E-100 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 21-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Gene3D G3DSA:1.10.8.50 131 269 5.1E-49 T 21-04-2016 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.503 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.1E-30 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 SUPERFAMILY SSF57716 218 269 8.99E-17 T 21-04-2016 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 SUPERFAMILY SSF81624 2 139 5.63E-39 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 SMART SM00898 2 116 1.4E-47 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 PANTHER PTHR22993 1 273 2.4E-121 T 21-04-2016 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.3E-26 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Pfam PF06827 Zinc finger found in FPG and IleRS 243 269 1.9E-8 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 PANTHER PTHR22993:SF15 1 273 2.4E-121 T 21-04-2016 APL_RS10550 800e2e437c4773a9682550623f5b09e1 273 Gene3D G3DSA:3.20.190.10 2 130 4.5E-35 T 21-04-2016 APL_RS08040 a6bda8f1c3eda8265250cf2099a38ec9 199 SUPERFAMILY SSF51735 2 197 1.03E-20 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08040 a6bda8f1c3eda8265250cf2099a38ec9 199 Pfam PF13460 NAD(P)H-binding 6 186 2.2E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08040 a6bda8f1c3eda8265250cf2099a38ec9 199 PANTHER PTHR15020 2 198 1.7E-23 T 21-04-2016 APL_RS08040 a6bda8f1c3eda8265250cf2099a38ec9 199 Gene3D G3DSA:3.40.50.720 2 197 4.4E-25 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 SUPERFAMILY SSF57863 87 169 5.49E-9 T 21-04-2016 APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 SUPERFAMILY SSF50249 5 76 1.88E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 PANTHER PTHR33991 2 233 2.3E-59 T 21-04-2016 APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 Pfam PF02565 Recombination protein O C terminal 85 227 2.9E-26 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 Pfam PF11967 Recombination protein O N terminal 1 77 3.6E-27 T 21-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 232 24.429 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 5.2E-48 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APL_RS02870 d22ee20568f05e74e8f68b09f45ae743 240 Gene3D G3DSA:2.40.50.140 7 75 5.2E-11 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07130 d2abb9e30c90f56aef3d02d61675e9fd 165 SUPERFAMILY SSF49777 1 163 1.83E-32 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APL_RS07130 d2abb9e30c90f56aef3d02d61675e9fd 165 PANTHER PTHR30289 1 163 3.1E-24 T 21-04-2016 APL_RS07130 d2abb9e30c90f56aef3d02d61675e9fd 165 Gene3D G3DSA:3.90.280.10 1 164 1.1E-49 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APL_RS07130 d2abb9e30c90f56aef3d02d61675e9fd 165 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 163 5.8E-30 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APL_RS07130 d2abb9e30c90f56aef3d02d61675e9fd 165 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 26 162 4.6E-32 T 21-04-2016 IPR005247 YbhB/YbcL APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 SMART SM00528 88 135 2.7E-24 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 PANTHER PTHR38097:SF2 2 135 2.4E-46 T 21-04-2016 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 Gene3D G3DSA:4.10.430.10 92 135 3.8E-25 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 Pfam PF00816 H-NS histone family 45 129 6.7E-20 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 SUPERFAMILY SSF81273 2 56 1.53E-14 T 21-04-2016 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 Gene3D G3DSA:1.10.287.1050 1 52 3.2E-15 T 21-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 PIRSF PIRSF002096 1 135 9.8E-49 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 PANTHER PTHR38097 2 135 2.4E-46 T 21-04-2016 APL_RS02305 dfddcc8fddf74a20f658a17a5d74822a 135 SUPERFAMILY SSF81273 93 135 1.88E-11 T 21-04-2016 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 Gene3D G3DSA:3.40.50.1000 43 245 1.1E-41 T 21-04-2016 IPR023214 HAD-like domain APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 PIRSF PIRSF019271 1 271 1.2E-103 T 21-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 PANTHER PTHR31284 225 241 3.0E-63 T 21-04-2016 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 PANTHER PTHR31284 43 206 3.0E-63 T 21-04-2016 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 SUPERFAMILY SSF56784 54 249 1.96E-30 T 21-04-2016 IPR023214 HAD-like domain APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 23 241 1.1E-57 T 21-04-2016 IPR005519 Acid phosphatase, class B-like APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 5 268 4.2E-93 T 21-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 PANTHER PTHR31284:SF10 225 241 3.0E-63 T 21-04-2016 APL_RS02000 4b00d8b51a1b70cf665cc4eb5fdc7171 271 PANTHER PTHR31284:SF10 43 206 3.0E-63 T 21-04-2016 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 Pfam PF13649 Methyltransferase domain 59 157 2.6E-12 T 21-04-2016 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 SUPERFAMILY SSF53335 19 241 1.59E-36 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 PANTHER PTHR10108:SF809 3 240 5.2E-110 T 21-04-2016 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 PIRSF PIRSF006325 1 241 1.7E-122 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 PANTHER PTHR10108 3 240 5.2E-110 T 21-04-2016 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 241 1.5E-125 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 2 241 43.057 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APL_RS03920 6737805e21401799bd2aba1c8ae6e549 241 Gene3D G3DSA:3.40.50.150 18 241 6.8E-64 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00175 3e61473f674a5d55d96fdf133325fd8d 145 PANTHER PTHR12714:SF7 10 145 5.6E-18 T 21-04-2016 APL_RS00175 3e61473f674a5d55d96fdf133325fd8d 145 Pfam PF04191 Phospholipid methyltransferase 32 132 1.2E-13 T 21-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 APL_RS00175 3e61473f674a5d55d96fdf133325fd8d 145 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 103 145 2.0E-8 T 21-04-2016 APL_RS00175 3e61473f674a5d55d96fdf133325fd8d 145 PANTHER PTHR12714 10 145 5.6E-18 T 21-04-2016 APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 SUPERFAMILY SSF52833 2 101 2.93E-30 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 PIRSF PIRSF005894 1 105 2.6E-46 T 21-04-2016 IPR014434 Monothiol glutaredoxin APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 PANTHER PTHR10293 2 105 1.5E-51 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 98 6.2E-41 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 Pfam PF00462 Glutaredoxin 16 78 2.7E-13 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APL_RS00390 e43c5494505f742d4a110297a3bb4ad8 105 Gene3D G3DSA:3.40.30.10 7 99 4.2E-28 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 PANTHER PTHR22572 21 397 1.6E-165 T 21-04-2016 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 PANTHER PTHR22572:SF10 21 397 1.6E-165 T 21-04-2016 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 SUPERFAMILY SSF53448 19 295 1.98E-75 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 SUPERFAMILY SSF53448 361 378 1.98E-75 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 SUPERFAMILY SSF51161 327 420 4.85E-18 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.2E-157 T 21-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 51.066 T 21-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 212 222 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 Pfam PF00483 Nucleotidyl transferase 23 291 2.5E-66 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 Gene3D G3DSA:3.90.550.10 344 387 1.4E-75 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS01795 89b1eacfa67dca02ad54dd8ad7e8e094 438 Gene3D G3DSA:3.90.550.10 22 302 1.4E-75 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 217 1.3E-91 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 Pfam PF02224 Cytidylate kinase 6 219 3.7E-79 T 21-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 SUPERFAMILY SSF52540 1 221 2.9E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 Hamap MF_00238 Cytidylate kinase [cmk]. 4 222 34.568 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 Gene3D G3DSA:3.40.50.300 4 218 4.3E-76 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03855 e393540741d99d53c00da64e7946f3bd 224 PANTHER PTHR21299 5 222 5.6E-75 T 21-04-2016 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 Gene3D G3DSA:3.30.250.10 285 343 3.6E-25 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PANTHER PTHR22942:SF1 16 352 9.3E-202 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 Gene3D G3DSA:3.40.50.300 45 284 1.5E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 Pfam PF00154 recA bacterial DNA recombination protein 24 285 1.8E-145 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 21 341 1.7E-169 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 ProSitePatterns PS00321 recA signature. 230 238 - T 21-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PANTHER PTHR22942 16 352 9.3E-202 T 21-04-2016 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 260 289 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 314 331 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 227 255 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 144 173 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 110 139 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 PRINTS PR00142 RecA protein signature 182 211 9.7E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 SUPERFAMILY SSF52540 22 284 4.68E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 SUPERFAMILY SSF54752 285 342 2.35E-18 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 Hamap MF_00268 Protein RecA [recA]. 22 346 50.611 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APL_RS05985 7bd4701706ecdc5fcfa5c0b90d02ac13 376 SMART SM00382 74 245 4.0E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 SUPERFAMILY SSF51395 13 323 5.7E-71 T 21-04-2016 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 12 326 7.8E-166 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 Gene3D G3DSA:3.20.20.70 10 255 3.2E-73 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 PANTHER PTHR11082:SF29 5 328 2.0E-154 T 21-04-2016 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 327 50.894 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 Pfam PF01207 Dihydrouridine synthase (Dus) 16 321 8.2E-94 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 PANTHER PTHR11082 5 328 2.0E-154 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00755 02b2429b3d50450b0c4410432798c5e0 329 PIRSF PIRSF006621 2 328 9.8E-71 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 5 394 1.9E-140 T 21-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 27 3.1E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 Pfam PF04261 Dyp-type peroxidase family 49 382 1.1E-102 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 SUPERFAMILY SSF54909 44 385 5.18E-84 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 PANTHER PTHR30521 32 396 7.4E-150 T 21-04-2016 APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 PANTHER PTHR30521:SF4 32 396 7.4E-150 T 21-04-2016 APL_RS03495 43a533ac8f57f962f4aa8135699b1aea 396 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 49 382 1.2E-86 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APL_RS09090 8880babd35d2ee2be6c4c7633460b7e2 668 Pfam PF03169 OPT oligopeptide transporter protein 9 619 2.3E-108 T 21-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APL_RS09090 8880babd35d2ee2be6c4c7633460b7e2 668 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 9 621 4.5E-239 T 21-04-2016 IPR004814 Oligopeptide transporter OPT APL_RS09090 8880babd35d2ee2be6c4c7633460b7e2 668 PANTHER PTHR31645 2 617 6.6E-141 T 21-04-2016 APL_RS09090 8880babd35d2ee2be6c4c7633460b7e2 668 PANTHER PTHR31645:SF0 2 617 6.6E-141 T 21-04-2016 APL_RS09090 8880babd35d2ee2be6c4c7633460b7e2 668 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 5 621 4.6E-123 T 21-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APL_RS06210 6470b9ce4938e4f8ff5437788140cab8 150 Pfam PF07366 SnoaL-like polyketide cyclase 33 139 2.4E-13 T 21-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APL_RS06210 6470b9ce4938e4f8ff5437788140cab8 150 Gene3D G3DSA:3.10.450.50 67 137 7.1E-9 T 21-04-2016 IPR032710 NTF2-like domain APL_RS06210 6470b9ce4938e4f8ff5437788140cab8 150 SUPERFAMILY SSF54427 26 139 2.27E-25 T 21-04-2016 IPR032710 NTF2-like domain APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 103 120 1.7E-6 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 35 45 1.7E-6 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 323 3.6E-45 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 PANTHER PTHR22594:SF7 1 322 9.0E-137 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 21 322 9.5E-131 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 Gene3D G3DSA:3.30.930.10 17 322 5.5E-73 T 21-04-2016 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 SUPERFAMILY SSF55681 16 322 8.23E-81 T 21-04-2016 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 6 327 52.958 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APL_RS08085 92e0fe0627830a47d182bf5b1b2d0c96 327 PANTHER PTHR22594 1 322 9.0E-137 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.31 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 PANTHER PTHR21057:SF6 3 284 3.1E-221 T 21-04-2016 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 SUPERFAMILY SSF51569 3 278 8.15E-107 T 21-04-2016 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 PANTHER PTHR21057 3 284 3.1E-221 T 21-04-2016 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 Gene3D G3DSA:3.20.20.70 16 281 4.4E-109 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.6E-125 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS08385 894d372270d32da2a4b526552423c6b6 284 Pfam PF00793 DAHP synthetase I family 10 275 3.4E-67 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 SUPERFAMILY SSF52540 8 150 3.33E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 PANTHER PTHR11088 3 288 2.5E-118 T 21-04-2016 APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 309 29.432 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 1.3E-119 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 Gene3D G3DSA:3.40.50.300 3 174 1.1E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 Gene3D G3DSA:1.10.287.890 202 284 2.9E-34 T 21-04-2016 APL_RS10385 9a80f933b50ffbab1407a26b1cec44f4 314 Pfam PF01715 IPP transferase 41 284 1.2E-83 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.8E-252 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 SUPERFAMILY SSF48592 322 526 1.98E-32 T 21-04-2016 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 21-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 3.1E-95 T 21-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 SUPERFAMILY SSF48592 3 230 1.96E-66 T 21-04-2016 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 Gene3D G3DSA:3.50.7.10 189 367 2.1E-97 T 21-04-2016 IPR027409 GroEL-like apical domain APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PANTHER PTHR11353 2 547 1.2E-250 T 21-04-2016 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.741 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 SUPERFAMILY SSF52029 185 376 6.73E-82 T 21-04-2016 IPR027409 GroEL-like apical domain APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 Gene3D G3DSA:1.10.560.10 3 188 1.3E-48 T 21-04-2016 IPR027413 GroEL-like equatorial domain APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.1E-73 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.1E-73 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.1E-73 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.1E-73 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.1E-73 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APL_RS05295 7b1a901d9d2ac5fbf5d894f2e7d6ffa3 547 Gene3D G3DSA:1.10.560.10 368 519 2.4E-38 T 21-04-2016 IPR027413 GroEL-like equatorial domain APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 Gene3D G3DSA:3.40.50.300 1 237 1.7E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 SMART SM00382 30 217 3.5E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 PANTHER PTHR24220 3 332 7.0E-172 T 21-04-2016 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 SUPERFAMILY SSF52540 1 240 8.44E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.6E-182 T 21-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 Pfam PF09383 NIL domain 268 339 5.0E-16 T 21-04-2016 IPR018449 NIL domain APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 Gene3D G3DSA:3.30.70.260 238 343 1.3E-27 T 21-04-2016 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 SMART SM00930 265 340 2.5E-19 T 21-04-2016 IPR018449 NIL domain APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 Pfam PF00005 ABC transporter 21 169 1.2E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 PANTHER PTHR24220:SF455 3 332 7.0E-172 T 21-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 SUPERFAMILY SSF55021 248 343 2.98E-21 T 21-04-2016 APL_RS04765 05589df442ab9ac2cc79156faf57a2aa 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06990 63976f7d14c63261a3187695fe76a3e6 393 Pfam PF03916 Polysulphide reductase, NrfD 41 326 2.4E-14 T 21-04-2016 IPR005614 NrfD family APL_RS06990 63976f7d14c63261a3187695fe76a3e6 393 PANTHER PTHR30074:SF4 5 385 9.6E-185 T 21-04-2016 APL_RS06990 63976f7d14c63261a3187695fe76a3e6 393 PANTHER PTHR30074 5 385 9.6E-185 T 21-04-2016 APL_RS08590 7bb04cf62203d46932db6cce6938eaad 271 Pfam PF03253 Urea transporter 1 252 4.4E-42 T 21-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 APL_RS08590 7bb04cf62203d46932db6cce6938eaad 271 PIRSF PIRSF016502 1 271 7.8E-68 T 21-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 APL_RS08590 7bb04cf62203d46932db6cce6938eaad 271 PANTHER PTHR10464 1 257 1.7E-25 T 21-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 APL_RS08590 7bb04cf62203d46932db6cce6938eaad 271 Gene3D G3DSA:1.10.3430.10 1 261 1.3E-51 T 21-04-2016 IPR029020 Ammonium/urea transporter APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 SUPERFAMILY SSF82607 11 103 9.29E-36 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.8E-41 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 PANTHER PTHR33449:SF1 1 109 7.0E-54 T 21-04-2016 APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 Gene3D G3DSA:3.30.1310.10 1 109 1.6E-51 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 PIRSF PIRSF004555 4 109 4.3E-39 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 PANTHER PTHR33449 1 109 7.0E-54 T 21-04-2016 APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 3.6E-35 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS00400 4f066f9cf42b8284b783001a1e67c638 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.777 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.1E-42 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 21-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PANTHER PTHR10046 9 778 0.0 T 21-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Hamap MF_01973 Lon protease [lon]. 11 774 69.347 T 21-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PIRSF PIRSF001174 1 777 0.0 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PANTHER PTHR10046:SF43 9 778 0.0 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Gene3D G3DSA:1.10.8.60 504 586 2.1E-34 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Gene3D G3DSA:3.30.230.10 593 773 7.2E-75 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 8.5E-56 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 8.5E-56 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 8.5E-56 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 8.5E-56 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 8.5E-56 T 21-04-2016 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 1.1E-95 T 21-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 SUPERFAMILY SSF88697 10 200 6.46E-44 T 21-04-2016 IPR015947 PUA-like domain APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Gene3D G3DSA:3.40.50.300 313 503 1.3E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 SMART SM00464 10 203 2.7E-66 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 1.8E-18 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 SUPERFAMILY SSF54211 597 772 1.37E-56 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 TIGRFAM TIGR00763 lon: endopeptidase La 12 772 4.0E-299 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 SMART SM00382 350 494 7.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01935 28ce6be99dd6cdd54b63ea31e58df96c 802 SUPERFAMILY SSF52540 315 590 1.06E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05060 b60ebd0ae758277cf3f1b3ca6daedf93 192 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 186 16.248 T 21-04-2016 IPR007336 Der GTPase activator APL_RS05060 b60ebd0ae758277cf3f1b3ca6daedf93 192 Pfam PF04220 Der GTPase activator (YihI) 32 183 2.7E-54 T 21-04-2016 IPR007336 Der GTPase activator APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.9E-39 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 SMART SM00971 9 113 1.3E-63 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 4.6E-10 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 PANTHER PTHR23416 5 258 2.0E-148 T 21-04-2016 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 Gene3D G3DSA:2.160.10.10 143 252 2.0E-30 T 21-04-2016 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 PANTHER PTHR23416:SF2 5 258 2.0E-148 T 21-04-2016 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 Gene3D G3DSA:1.10.3130.10 7 142 5.3E-49 T 21-04-2016 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.0E-74 T 21-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APL_RS07965 de9d13d17c1f2d79cf2d8adcb5df6a53 271 SUPERFAMILY SSF51161 8 260 3.19E-66 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS08545 177bf1a04666ffa9ae5acef3179679ff 97 SUPERFAMILY SSF54909 1 93 1.73E-21 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel APL_RS08545 177bf1a04666ffa9ae5acef3179679ff 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 7.2E-12 T 21-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APL_RS08545 177bf1a04666ffa9ae5acef3179679ff 97 Gene3D G3DSA:3.30.70.900 1 90 1.9E-23 T 21-04-2016 APL_RS08545 177bf1a04666ffa9ae5acef3179679ff 97 PANTHER PTHR33336:SF5 1 96 3.1E-16 T 21-04-2016 APL_RS08545 177bf1a04666ffa9ae5acef3179679ff 97 PANTHER PTHR33336 1 96 3.1E-16 T 21-04-2016 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PANTHER PTHR32176:SF0 3 439 4.8E-263 T 21-04-2016 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 333 344 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 133 153 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 92 114 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 271 298 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 180 201 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 229 253 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 156 175 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 207 226 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PRINTS PR00688 Xylose isomerase signature 300 311 7.4E-86 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 SUPERFAMILY SSF51658 3 438 4.15E-178 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.7E-214 T 21-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.906 T 21-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 PANTHER PTHR32176 3 439 4.8E-263 T 21-04-2016 APL_RS10135 a8654c83864a60b6bb4f1013b5036e4d 439 Gene3D G3DSA:3.20.20.150 3 438 1.2E-211 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS06535 5dccf5e8123ed1ba9e60649de5e6c0a9 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 458 1.3E-99 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS06535 5dccf5e8123ed1ba9e60649de5e6c0a9 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 408 424 - T 21-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APL_RS06535 5dccf5e8123ed1ba9e60649de5e6c0a9 462 PANTHER PTHR10283:SF82 2 450 5.8E-106 T 21-04-2016 APL_RS06535 5dccf5e8123ed1ba9e60649de5e6c0a9 462 PANTHER PTHR10283 2 450 5.8E-106 T 21-04-2016 APL_RS06535 5dccf5e8123ed1ba9e60649de5e6c0a9 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 31 459 2.4E-43 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS00645 41b2bae7cd8816bec9f910aacde2fafa 249 Pfam PF01636 Phosphotransferase enzyme family 32 219 4.2E-15 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase APL_RS00645 41b2bae7cd8816bec9f910aacde2fafa 249 Gene3D G3DSA:3.90.1200.10 64 238 2.4E-22 T 21-04-2016 APL_RS00645 41b2bae7cd8816bec9f910aacde2fafa 249 SUPERFAMILY SSF56112 22 225 9.01E-31 T 21-04-2016 IPR011009 Protein kinase-like domain APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 Gene3D G3DSA:3.30.70.100 2 89 4.7E-26 T 21-04-2016 APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 PANTHER PTHR10029:SF3 6 90 3.7E-20 T 21-04-2016 APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 Pfam PF00708 Acylphosphatase 1 89 1.5E-24 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 PANTHER PTHR10029 6 90 3.7E-20 T 21-04-2016 APL_RS00740 6cf60d2547695f5de91f85f157a50de1 90 SUPERFAMILY SSF54975 2 89 6.98E-25 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 Pfam PF12704 MacB-like periplasmic core domain 268 483 1.1E-34 T 21-04-2016 IPR025857 MacB-like periplasmic core domain APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 PANTHER PTHR24220:SF86 5 227 2.2E-107 T 21-04-2016 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 SMART SM00382 32 219 2.3E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 Gene3D G3DSA:3.40.50.300 2 223 3.9E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 Pfam PF02687 FtsX-like permease family 520 633 2.6E-20 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 PANTHER PTHR24220 5 227 2.2E-107 T 21-04-2016 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 Pfam PF00005 ABC transporter 23 171 4.7E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS03280 299d463e5e85743084ffb0bc6772cb2f 640 SUPERFAMILY SSF52540 3 227 1.27E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Pfam PF13247 4Fe-4S dicluster domain 86 184 2.2E-24 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Gene3D G3DSA:3.30.70.20 100 131 5.2E-12 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 128 139 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 225 3.9E-131 T 21-04-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Pfam PF12798 4Fe-4S binding domain 49 61 0.14 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 PANTHER PTHR11938:SF110 5 194 1.3E-98 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 PANTHER PTHR11938 5 194 1.3E-98 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 SUPERFAMILY SSF54862 36 218 2.72E-64 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Gene3D G3DSA:3.30.70.20 169 217 6.1E-34 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Gene3D G3DSA:3.30.70.20 39 99 6.1E-34 T 21-04-2016 APL_RS00535 975c366e33e05e0bb830d96b9d24fb72 225 Gene3D G3DSA:3.30.70.20 132 168 1.2E-15 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 SUPERFAMILY SSF50249 9 174 4.97E-41 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Gene3D G3DSA:1.10.150.20 3 37 5.5E-6 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Pfam PF17191 RecG wedge domain 15 172 1.6E-28 T 21-04-2016 IPR033454 RecG, wedge domain APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Gene3D G3DSA:3.40.50.300 253 453 1.8E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Gene3D G3DSA:3.40.50.300 454 638 5.9E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031:SF249 299 602 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031:SF249 626 683 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031:SF249 178 282 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031:SF249 19 52 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 SUPERFAMILY SSF52540 196 453 1.05E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Gene3D G3DSA:2.40.50.140 47 142 1.2E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Pfam PF00270 DEAD/DEAH box helicase 292 407 9.3E-19 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 Pfam PF00271 Helicase conserved C-terminal domain 476 588 4.9E-19 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 SUPERFAMILY SSF52540 388 600 1.33E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 SMART SM00487 265 459 1.6E-31 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031 299 602 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031 626 683 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031 178 282 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 PANTHER PTHR24031 19 52 6.1E-128 T 21-04-2016 APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 SMART SM00490 505 589 7.9E-22 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS09710 7483d23ff6866e28e2977ac23319d54a 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 1.5E-245 T 21-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APL_RS08780 e8df49590675202387e390e7875d249a 262 Gene3D G3DSA:1.20.120.220 83 258 2.7E-53 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 SUPERFAMILY SSF81336 82 254 2.75E-43 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 PANTHER PTHR11410 20 262 1.7E-94 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 22 256 3.3E-50 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 ProSitePatterns PS00449 ATP synthase a subunit signature. 189 198 - T 21-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site APL_RS08780 e8df49590675202387e390e7875d249a 262 Pfam PF00119 ATP synthase A chain 31 254 2.5E-54 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 PANTHER PTHR11410:SF7 20 262 1.7E-94 T 21-04-2016 APL_RS08780 e8df49590675202387e390e7875d249a 262 PRINTS PR00123 ATP synthase A subunit signature 186 208 8.8E-13 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 PRINTS PR00123 ATP synthase A subunit signature 88 104 8.8E-13 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 PRINTS PR00123 ATP synthase A subunit signature 240 255 8.8E-13 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS08780 e8df49590675202387e390e7875d249a 262 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 260 15.037 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PANTHER PTHR22939:SF93 42 341 2.0E-131 T 21-04-2016 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 SMART SM00228 250 328 1.4E-8 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 180 197 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 286 298 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 105 125 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 145 169 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PRINTS PR00834 HtrA/DegQ protease family signature 84 96 5.4E-44 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 341 3.1E-138 T 21-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 Pfam PF13180 PDZ domain 264 335 1.0E-13 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 Gene3D G3DSA:2.30.42.10 254 341 4.3E-19 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 Pfam PF13365 Trypsin-like peptidase domain 75 209 2.6E-29 T 21-04-2016 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 SUPERFAMILY SSF50494 37 255 1.42E-57 T 21-04-2016 IPR009003 Peptidase S1, PA clan APL_RS03860 47c0653beb547a4124f670d0790874d1 343 Gene3D G3DSA:2.40.10.10 140 253 7.9E-41 T 21-04-2016 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 SUPERFAMILY SSF50156 231 335 4.34E-19 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 Gene3D G3DSA:2.40.10.10 37 139 2.8E-30 T 21-04-2016 APL_RS03860 47c0653beb547a4124f670d0790874d1 343 PANTHER PTHR22939 42 341 2.0E-131 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PANTHER PTHR11632 1 527 2.0E-48 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 9.3E-12 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 9.3E-12 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 9.3E-12 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 Pfam PF00890 FAD binding domain 13 396 9.9E-37 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.5E-8 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 1.5E-8 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 522 532 1.5E-8 T 21-04-2016 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 Gene3D G3DSA:1.20.58.100 462 530 7.9E-8 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 Gene3D G3DSA:3.50.50.60 6 259 6.7E-57 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 Gene3D G3DSA:3.50.50.60 361 461 6.7E-57 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 SUPERFAMILY SSF51905 361 430 5.8E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 SUPERFAMILY SSF51905 4 245 5.8E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04460 8e4475dd01d0b5d75c278f126ba07cf5 532 SUPERFAMILY SSF46977 443 530 1.8E-10 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APL_RS09515 17bd7cbe21b7bb5e3390d321a788be41 397 SMART SM00558 97 222 8.0E-11 T 21-04-2016 IPR003347 JmjC domain APL_RS09515 17bd7cbe21b7bb5e3390d321a788be41 397 Pfam PF08007 Cupin superfamily protein 13 321 7.1E-92 T 21-04-2016 IPR003347 JmjC domain APL_RS09515 17bd7cbe21b7bb5e3390d321a788be41 397 PANTHER PTHR13096 11 363 5.8E-40 T 21-04-2016 APL_RS09515 17bd7cbe21b7bb5e3390d321a788be41 397 Gene3D G3DSA:2.60.120.650 7 212 5.1E-36 T 21-04-2016 APL_RS09515 17bd7cbe21b7bb5e3390d321a788be41 397 SUPERFAMILY SSF51197 7 285 3.3E-62 T 21-04-2016 APL_RS01650 a99bb40db3904bd2c834ffad7c38f3b7 362 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 11 340 4.7E-20 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APL_RS01650 a99bb40db3904bd2c834ffad7c38f3b7 362 Gene3D G3DSA:3.20.20.210 4 361 4.9E-108 T 21-04-2016 APL_RS01650 a99bb40db3904bd2c834ffad7c38f3b7 362 PANTHER PTHR30519:SF3 7 362 2.1E-140 T 21-04-2016 APL_RS01650 a99bb40db3904bd2c834ffad7c38f3b7 362 PANTHER PTHR30519 7 362 2.1E-140 T 21-04-2016 APL_RS01650 a99bb40db3904bd2c834ffad7c38f3b7 362 SUPERFAMILY SSF51726 10 360 1.09E-80 T 21-04-2016 APL_RS10315 56de6607780431955941ff6cc1c21122 242 SUPERFAMILY SSF56214 20 91 1.01E-11 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APL_RS10315 56de6607780431955941ff6cc1c21122 242 PANTHER PTHR12215:SF10 31 165 1.5E-17 T 21-04-2016 APL_RS10315 56de6607780431955941ff6cc1c21122 242 PANTHER PTHR12215 31 165 1.5E-17 T 21-04-2016 APL_RS10315 56de6607780431955941ff6cc1c21122 242 Gene3D G3DSA:3.90.470.20 114 166 3.1E-9 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APL_RS10315 56de6607780431955941ff6cc1c21122 242 SUPERFAMILY SSF56214 102 226 9.94E-18 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APL_RS10315 56de6607780431955941ff6cc1c21122 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 102 175 9.6E-9 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APL_RS10315 56de6607780431955941ff6cc1c21122 242 Gene3D G3DSA:3.90.470.20 40 113 6.8E-14 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Gene3D G3DSA:2.40.50.140 1 64 8.6E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Pfam PF07499 RuvA, C-terminal domain 157 199 4.7E-14 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 SUPERFAMILY SSF47781 66 139 3.56E-22 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 31.887 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.0E-17 T 21-04-2016 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 SUPERFAMILY SSF46929 155 198 7.72E-10 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Gene3D G3DSA:1.10.150.20 67 144 3.6E-31 T 21-04-2016 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 SMART SM00278 73 92 0.18 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 SMART SM00278 108 127 0.0039 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 199 6.4E-70 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 SUPERFAMILY SSF50249 1 63 1.6E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 PANTHER PTHR33796 2 199 6.4E-77 T 21-04-2016 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Pfam PF01330 RuvA N terminal domain 1 62 4.6E-22 T 21-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APL_RS01465 dacf18470afc1de6d912e38663c9943f 201 Gene3D G3DSA:1.10.8.10 155 198 3.2E-18 T 21-04-2016 APL_RS09015 577f4d21a061bcb0b1e113c6c154bb6a 155 SUPERFAMILY SSF55804 4 151 8.37E-35 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APL_RS09015 577f4d21a061bcb0b1e113c6c154bb6a 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 151 3.6E-33 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS09015 577f4d21a061bcb0b1e113c6c154bb6a 155 PANTHER PTHR36203 1 155 4.4E-52 T 21-04-2016 APL_RS09015 577f4d21a061bcb0b1e113c6c154bb6a 155 Gene3D G3DSA:3.40.930.10 4 151 5.4E-51 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 PANTHER PTHR10072 1 107 9.0E-52 T 21-04-2016 APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 Gene3D G3DSA:2.60.300.12 2 96 5.9E-36 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.5E-38 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-25 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.5E-58 T 21-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 APL_RS04855 06140cc75e7ccf15b534786ee834e9f4 107 SUPERFAMILY SSF89360 1 96 3.79E-34 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 ProSitePatterns PS01215 Mrp family signature. 208 224 - T 21-04-2016 IPR000808 Mrp, conserved site GO:0005524 APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 Hamap MF_02040 Iron-sulfur cluster carrier protein. 96 345 37.466 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 PANTHER PTHR23264 3 365 6.1E-177 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 101 344 1.7E-102 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 PANTHER PTHR23264:SF19 3 365 6.1E-177 T 21-04-2016 APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 SUPERFAMILY SSF52540 103 349 1.6E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05235 90f115d787c151c205a4ad8cce3b389f 365 Gene3D G3DSA:3.40.50.300 91 344 1.7E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09295 cd92d33e17e623097718032e56a417ab 508 SUPERFAMILY SSF52540 191 504 4.78E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09295 cd92d33e17e623097718032e56a417ab 508 SUPERFAMILY SSF54211 8 168 1.18E-30 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS09295 cd92d33e17e623097718032e56a417ab 508 PANTHER PTHR32039:SF7 1 507 5.6E-264 T 21-04-2016 IPR004482 Mg chelatase-related protein APL_RS09295 cd92d33e17e623097718032e56a417ab 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 394 6.0E-92 T 21-04-2016 IPR000523 Magnesium chelatase ChlI domain APL_RS09295 cd92d33e17e623097718032e56a417ab 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 4.1E-30 T 21-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APL_RS09295 cd92d33e17e623097718032e56a417ab 508 SMART SM00382 213 393 1.8E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09295 cd92d33e17e623097718032e56a417ab 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 2.3E-44 T 21-04-2016 APL_RS09295 cd92d33e17e623097718032e56a417ab 508 PANTHER PTHR32039 1 507 5.6E-264 T 21-04-2016 APL_RS09295 cd92d33e17e623097718032e56a417ab 508 Gene3D G3DSA:3.30.230.10 5 167 1.5E-27 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS09295 cd92d33e17e623097718032e56a417ab 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 1.9E-232 T 21-04-2016 IPR004482 Mg chelatase-related protein APL_RS09295 cd92d33e17e623097718032e56a417ab 508 Gene3D G3DSA:3.40.50.300 192 390 7.2E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 Pfam PF00005 ABC transporter 46 177 6.2E-21 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 PANTHER PTHR24220:SF117 32 241 1.9E-93 T 21-04-2016 APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 SMART SM00382 55 242 8.0E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 SUPERFAMILY SSF52540 23 238 5.22E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 Gene3D G3DSA:3.40.50.300 4 238 4.3E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 PANTHER PTHR24220 32 241 1.9E-93 T 21-04-2016 APL_RS07725 6515ef7e0e6a7683dadfb1c56c9df57c 243 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 SUPERFAMILY SSF52540 838 882 8.34E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 SUPERFAMILY SSF52540 542 634 8.34E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 SUPERFAMILY SSF52540 439 484 8.34E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 SUPERFAMILY SSF52540 715 807 8.34E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1113 0.0 T 21-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 Gene3D G3DSA:3.40.50.300 438 515 3.5E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01090 9a1b5d909eb4d47fc1d5385bfc1798f5 1115 Gene3D G3DSA:3.40.50.300 562 634 3.5E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 Gene3D G3DSA:1.20.1290.10 1 178 1.7E-33 T 21-04-2016 IPR029032 AhpD-like APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 Pfam PF02627 Carboxymuconolactone decarboxylase family 53 106 3.2E-10 T 21-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 PANTHER PTHR35446 1 179 1.8E-78 T 21-04-2016 APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 PANTHER PTHR35446:SF1 1 179 1.8E-78 T 21-04-2016 APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 SUPERFAMILY SSF69118 1 179 1.31E-41 T 21-04-2016 IPR029032 AhpD-like APL_RS05600 5986e29b4de10542ebd4ff910c1283e5 180 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 106 1.1E-11 T 21-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 SMART SM00876 236 328 3.2E-41 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 Hamap MF_01694 Biotin synthase [bioB]. 24 329 38.542 T 21-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 325 1.1E-16 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 PANTHER PTHR22976:SF1 21 328 9.9E-145 T 21-04-2016 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 Pfam PF04055 Radical SAM superfamily 66 217 2.7E-15 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 PANTHER PTHR22976 21 328 9.9E-145 T 21-04-2016 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 SUPERFAMILY SSF102114 23 328 2.22E-86 T 21-04-2016 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 5.0E-114 T 21-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 Gene3D G3DSA:3.20.20.70 23 328 1.6E-93 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 PIRSF PIRSF001619 5 333 3.5E-124 T 21-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS00610 a4eb5c2108491d6c7695c1f10267ca1b 336 SMART SM00729 59 265 2.6E-29 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS00730 385dd7879516ecfdd2ec6f3ff27a44ba 420 PANTHER PTHR30354 1 420 9.1E-130 T 21-04-2016 APL_RS00730 385dd7879516ecfdd2ec6f3ff27a44ba 420 Pfam PF02447 GntP family permease 7 414 9.0E-25 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APL_RS00730 385dd7879516ecfdd2ec6f3ff27a44ba 420 PANTHER PTHR30354:SF1 1 420 9.1E-130 T 21-04-2016 APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 337 6.4E-80 T 21-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 PANTHER PTHR30175 15 476 6.0E-84 T 21-04-2016 APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 SMART SM00640 38 440 2.6E-93 T 21-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 SUPERFAMILY SSF75005 29 338 3.14E-84 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 PANTHER PTHR30175:SF8 15 476 6.0E-84 T 21-04-2016 APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 Gene3D G3DSA:2.115.10.20 44 262 2.3E-13 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 SUPERFAMILY SSF49899 355 457 3.01E-20 T 21-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 Gene3D G3DSA:2.60.120.560 330 465 1.7E-20 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 383 440 2.8E-6 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APL_RS10770 073393d69372d2ee6e264a9b29de0252 478 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 29 450 7.3E-115 T 21-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 Gene3D G3DSA:1.10.287.1040 3 72 2.4E-24 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 PIRSF PIRSF006488 1 73 6.2E-21 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 PANTHER PTHR34137 1 74 2.1E-18 T 21-04-2016 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 3.0E-16 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 SUPERFAMILY SSF116842 3 68 4.05E-19 T 21-04-2016 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 4.6E-21 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.062 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04220 98a9f326b4fdee11089f61423fb4f956 74 Pfam PF02609 Exonuclease VII small subunit 9 60 1.0E-18 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APL_RS01765 653d7457516e4f671cdbfcdb6039d72d 191 PANTHER PTHR34478 1 191 2.4E-68 T 21-04-2016 APL_RS01765 653d7457516e4f671cdbfcdb6039d72d 191 SUPERFAMILY SSF140478 23 179 1.44E-50 T 21-04-2016 IPR023353 LemA-like domain APL_RS01765 653d7457516e4f671cdbfcdb6039d72d 191 Gene3D G3DSA:1.20.1440.20 14 190 7.9E-59 T 21-04-2016 IPR023353 LemA-like domain APL_RS01765 653d7457516e4f671cdbfcdb6039d72d 191 PANTHER PTHR34478:SF2 1 191 2.4E-68 T 21-04-2016 APL_RS01765 653d7457516e4f671cdbfcdb6039d72d 191 Pfam PF04011 LemA family 5 190 3.3E-66 T 21-04-2016 IPR007156 LemA APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 36 110 3.2E-16 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 PANTHER PTHR30175 1 461 6.9E-182 T 21-04-2016 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 PANTHER PTHR30175:SF7 1 461 6.9E-182 T 21-04-2016 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 Pfam PF00367 phosphotransferase system, EIIB 10 41 1.3E-14 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 Pfam PF02378 Phosphotransferase system, EIIC 111 410 1.4E-48 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 464 1.1E-183 T 21-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 SUPERFAMILY SSF55604 6 82 2.09E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APL_RS06920 78d3b1bd74bcf48e9ed529f75b15d9c1 473 Gene3D G3DSA:3.30.1360.60 2 83 3.8E-28 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 SMART SM00382 29 248 6.2E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 SMART SM00382 277 471 7.0E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 SUPERFAMILY SSF52540 245 481 1.97E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 SUPERFAMILY SSF52540 3 231 5.22E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 PANTHER PTHR24220 6 377 3.7E-207 T 21-04-2016 APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 Gene3D G3DSA:3.40.50.300 2 236 2.7E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 Pfam PF00005 ABC transporter 20 169 3.6E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 Pfam PF00005 ABC transporter 268 422 2.2E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 Gene3D G3DSA:3.40.50.300 268 486 5.7E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08870 e0ed62557d43f2d40ecb21c6a7c609c7 493 PANTHER PTHR24220:SF416 6 377 3.7E-207 T 21-04-2016 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 SUPERFAMILY SSF53062 1 127 8.89E-34 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 Gene3D G3DSA:3.40.50.510 1 131 7.1E-42 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 PANTHER PTHR33799:SF3 2 312 2.7E-97 T 21-04-2016 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 PANTHER PTHR33799 2 312 2.7E-97 T 21-04-2016 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 Pfam PF03610 PTS system fructose IIA component 4 115 8.9E-26 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 2.0E-38 T 21-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 Gene3D G3DSA:3.40.35.10 160 315 2.5E-55 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 SUPERFAMILY SSF52728 160 314 5.36E-49 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS08830 9572f495290fe79bc3f31c35b0850a01 322 Pfam PF03830 PTS system sorbose subfamily IIB component 162 309 1.6E-47 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 PRINTS PR01853 Bacterial YajC preprotein translocase signature 45 63 1.0E-14 T 21-04-2016 IPR003849 Preprotein translocase YajC APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 PRINTS PR01853 Bacterial YajC preprotein translocase signature 7 27 1.0E-14 T 21-04-2016 IPR003849 Preprotein translocase YajC APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 Pfam PF02699 Preprotein translocase subunit 9 86 2.1E-25 T 21-04-2016 IPR003849 Preprotein translocase YajC APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 SMART SM01323 5 89 3.2E-37 T 21-04-2016 IPR003849 Preprotein translocase YajC APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 PANTHER PTHR33909:SF1 2 95 1.5E-28 T 21-04-2016 APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 7 89 8.6E-32 T 21-04-2016 IPR003849 Preprotein translocase YajC APL_RS05565 883889771c2f5dc8f11a3241ce7d039a 98 PANTHER PTHR33909 2 95 1.5E-28 T 21-04-2016 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 227 8.0E-75 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 PIRSF PIRSF001357 4 254 2.6E-74 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 PANTHER PTHR10889 1 256 4.8E-110 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 SMART SM01133 9 245 3.7E-79 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 Gene3D G3DSA:3.20.20.70 7 255 8.0E-92 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 51.542 T 21-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 SUPERFAMILY SSF51569 10 245 4.08E-81 T 21-04-2016 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 PANTHER PTHR10889:SF3 1 256 4.8E-110 T 21-04-2016 APL_RS05310 9f0496a9be570781a6e2c4d36d3ec14e 258 Pfam PF01791 DeoC/LacD family aldolase 10 240 2.6E-41 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APL_RS09075 24a845da49cd08fad507ba8168554236 308 Gene3D G3DSA:3.40.50.720 2 171 2.7E-21 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS09075 24a845da49cd08fad507ba8168554236 308 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 307 8.8E-132 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APL_RS09075 24a845da49cd08fad507ba8168554236 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 2.4E-45 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APL_RS09075 24a845da49cd08fad507ba8168554236 308 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 308 55.508 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APL_RS09075 24a845da49cd08fad507ba8168554236 308 PANTHER PTHR10366:SF469 1 308 1.7E-119 T 21-04-2016 APL_RS09075 24a845da49cd08fad507ba8168554236 308 Gene3D G3DSA:3.90.25.10 172 289 1.5E-36 T 21-04-2016 APL_RS09075 24a845da49cd08fad507ba8168554236 308 PANTHER PTHR10366 1 308 1.7E-119 T 21-04-2016 APL_RS09075 24a845da49cd08fad507ba8168554236 308 SUPERFAMILY SSF51735 1 306 3.94E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 Pfam PF01316 Arginine repressor, DNA binding domain 6 71 4.5E-22 T 21-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 TIGRFAM TIGR01529 argR_whole: arginine repressor 6 148 3.8E-45 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PANTHER PTHR34471:SF1 1 153 2.3E-61 T 21-04-2016 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 86 150 3.0E-19 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 Gene3D G3DSA:1.10.10.10 2 74 6.6E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 Pfam PF02863 Arginine repressor, C-terminal domain 79 145 1.6E-23 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PRINTS PR01467 Bacterial arginine repressor signature 87 100 2.2E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PRINTS PR01467 Bacterial arginine repressor signature 39 54 2.2E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PRINTS PR01467 Bacterial arginine repressor signature 118 133 2.2E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PRINTS PR01467 Bacterial arginine repressor signature 22 35 2.2E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 SUPERFAMILY SSF55252 79 148 1.2E-20 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 Hamap MF_00173 Arginine repressor [argR]. 1 152 60.358 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 Gene3D G3DSA:3.30.1360.40 77 150 7.7E-27 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 SUPERFAMILY SSF46785 6 74 2.99E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06795 7ab98d75d556d0dd611d54d909eb5c4c 153 PANTHER PTHR34471 1 153 2.3E-61 T 21-04-2016 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 PANTHER PTHR33795 1 169 7.6E-52 T 21-04-2016 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 SUPERFAMILY SSF46689 1 52 2.15E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 SUPERFAMILY SSF46689 57 161 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 Gene3D G3DSA:1.10.10.60 62 155 2.2E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 PANTHER PTHR33795:SF1 1 169 7.6E-52 T 21-04-2016 APL_RS07575 1208e8fbb24c55d331a6b38d3a0021b9 169 Pfam PF13518 Helix-turn-helix domain 65 118 8.6E-12 T 21-04-2016 APL_RS09960 9c893768f9c07dfa2ec0d3e1c5f6b77b 222 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 28 184 2.5E-38 T 21-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 APL_RS09960 9c893768f9c07dfa2ec0d3e1c5f6b77b 222 PANTHER PTHR34385 1 73 2.8E-50 T 21-04-2016 APL_RS09960 9c893768f9c07dfa2ec0d3e1c5f6b77b 222 PANTHER PTHR34385 92 222 2.8E-50 T 21-04-2016 APL_RS09960 9c893768f9c07dfa2ec0d3e1c5f6b77b 222 SUPERFAMILY SSF55166 20 185 1.8E-20 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 Gene3D G3DSA:3.90.730.10 85 255 2.8E-28 T 21-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 175 186 - T 21-04-2016 IPR033130 Ribonuclease T2, His active site 2 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 Pfam PF00445 Ribonuclease T2 family 90 207 2.4E-13 T 21-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 PANTHER PTHR11240:SF22 45 254 7.8E-14 T 21-04-2016 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 PANTHER PTHR11240 45 254 7.8E-14 T 21-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 129 136 - T 21-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 APL_RS06620 7b7298fd7f797b0b00a606aa4266f81a 255 SUPERFAMILY SSF55895 86 254 8.11E-33 T 21-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APL_RS06110 0aeb9eef5a4c063fdd4a36d7638c7f02 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.3E-17 T 21-04-2016 IPR007420 Protein of unknown function DUF465 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Gene3D G3DSA:3.40.50.740 398 504 6.5E-47 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Gene3D G3DSA:3.40.50.740 86 187 6.5E-47 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Gene3D G3DSA:3.40.228.10 191 397 6.6E-62 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 717 744 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Gene3D G3DSA:2.40.40.20 653 815 3.0E-58 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Gene3D G3DSA:3.90.55.10 505 607 4.0E-35 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 SUPERFAMILY SSF53706 52 678 2.36E-174 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 PANTHER PTHR11615:SF19 32 823 0.0 T 21-04-2016 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Pfam PF01568 Molydopterin dinucleotide binding domain 678 798 1.0E-27 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 502 519 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 Pfam PF00384 Molybdopterin oxidoreductase 94 560 1.2E-111 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 SUPERFAMILY SSF50692 670 821 8.14E-44 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 51 821 0.0 T 21-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 APL_RS03590 6e15b14fdd61636a778c05099dd0822f 824 PANTHER PTHR11615 32 823 0.0 T 21-04-2016 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 Gene3D G3DSA:1.10.530.10 167 361 1.1E-42 T 21-04-2016 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 PANTHER PTHR21666:SF224 180 361 2.4E-45 T 21-04-2016 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 SUPERFAMILY SSF53955 171 359 5.93E-37 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 Pfam PF11873 Domain of unknown function (DUF3393) 6 195 8.1E-68 T 21-04-2016 IPR024570 Murein transglycosylase-C, N-terminal APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 218 246 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 PANTHER PTHR21666 180 361 2.4E-45 T 21-04-2016 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 Pfam PF01464 Transglycosylase SLT domain 201 322 9.0E-29 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 APL_RS09245 b3655e7d457e0247aaf9f0d1d9a6a1c2 365 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 4 363 64.773 T 21-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 Gene3D G3DSA:3.40.50.300 2 250 1.0E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 Pfam PF00005 ABC transporter 28 175 6.3E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 PANTHER PTHR24220:SF81 5 253 1.3E-94 T 21-04-2016 APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 PANTHER PTHR24220 5 253 1.3E-94 T 21-04-2016 APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 SUPERFAMILY SSF52540 2 249 3.47E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06520 f911c1b878cbfbc9460808a3fd98c773 266 SMART SM00382 37 226 1.7E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.0E-38 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 SUPERFAMILY SSF56059 83 346 4.6E-70 T 21-04-2016 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.8E-246 T 21-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Gene3D G3DSA:3.30.1490.20 130 203 6.5E-31 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Gene3D G3DSA:3.40.50.20 1 129 5.9E-51 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 SMART SM00878 336 441 8.6E-66 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 PANTHER PTHR18866 1 442 0.0 T 21-04-2016 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 SUPERFAMILY SSF52440 1 113 1.58E-47 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Gene3D G3DSA:3.30.470.20 204 444 2.0E-100 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.3E-45 T 21-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.4E-85 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APL_RS09925 48fda02259d49b8d99b0e6e2e830a6b0 447 SUPERFAMILY SSF51246 331 444 1.62E-43 T 21-04-2016 IPR011054 Rudiment single hybrid motif APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 SUPERFAMILY SSF56784 1 270 1.73E-68 T 21-04-2016 IPR023214 HAD-like domain APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 21-04-2016 APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 239 7.6E-22 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 PANTHER PTHR10000:SF8 1 272 2.7E-72 T 21-04-2016 APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 7.9E-64 T 21-04-2016 IPR023214 HAD-like domain APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 Gene3D G3DSA:3.40.50.1000 1 73 1.9E-53 T 21-04-2016 IPR023214 HAD-like domain APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 Gene3D G3DSA:3.40.50.1000 175 271 1.9E-53 T 21-04-2016 IPR023214 HAD-like domain APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 265 3.5E-61 T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 PANTHER PTHR10000 1 272 2.7E-72 T 21-04-2016 APL_RS02370 5213d8e828a4ab005c6b72919bd67c14 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 Gene3D G3DSA:3.40.605.10 370 411 2.4E-101 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 Gene3D G3DSA:3.40.605.10 3 221 2.4E-101 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 411 39.811 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 SUPERFAMILY SSF53720 5 407 1.11E-110 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 401 1.3E-174 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 Pfam PF00171 Aldehyde dehydrogenase family 9 288 2.6E-14 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 PANTHER PTHR11063 1 411 5.8E-176 T 21-04-2016 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 PIRSF PIRSF000151 1 412 1.3E-166 T 21-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 Gene3D G3DSA:3.40.309.10 224 369 3.9E-39 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APL_RS10345 dbc311b7560b9e48731b94346136229d 412 PANTHER PTHR11063:SF8 1 411 5.8E-176 T 21-04-2016 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 Gene3D G3DSA:3.40.50.720 193 312 1.5E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06315 53ba24865cf0449893a9862870feb11d 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 PANTHER PTHR11695 131 372 8.4E-207 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 PANTHER PTHR11695 18 111 8.4E-207 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 4.3E-224 T 21-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 PANTHER PTHR11695:SF560 131 372 8.4E-207 T 21-04-2016 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 PANTHER PTHR11695:SF560 18 111 8.4E-207 T 21-04-2016 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 Pfam PF00107 Zinc-binding dehydrogenase 200 332 3.7E-25 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 157 2.2E-26 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 SUPERFAMILY SSF50129 321 372 4.0E-12 T 21-04-2016 IPR011032 GroES-like APL_RS06315 53ba24865cf0449893a9862870feb11d 372 SUPERFAMILY SSF51735 163 337 6.85E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06315 53ba24865cf0449893a9862870feb11d 372 SMART SM00829 13 370 7.3E-5 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APL_RS06315 53ba24865cf0449893a9862870feb11d 372 SUPERFAMILY SSF50129 2 189 6.24E-73 T 21-04-2016 IPR011032 GroES-like APL_RS06315 53ba24865cf0449893a9862870feb11d 372 Gene3D G3DSA:3.90.180.10 4 192 3.6E-70 T 21-04-2016 IPR011032 GroES-like APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Pfam PF01565 FAD binding domain 41 160 2.4E-9 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Gene3D G3DSA:3.30.70.610 371 429 3.5E-41 T 21-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Gene3D G3DSA:3.30.70.610 263 304 3.5E-41 T 21-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Gene3D G3DSA:3.30.1370.20 430 514 7.0E-46 T 21-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Pfam PF09330 D-lactate dehydrogenase, membrane binding 272 562 2.3E-145 T 21-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 SUPERFAMILY SSF55103 269 562 2.03E-113 T 21-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Gene3D G3DSA:3.30.465.10 101 262 4.1E-83 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 Gene3D G3DSA:3.30.43.10 6 99 1.2E-11 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 PANTHER PTHR11748 9 185 5.8E-59 T 21-04-2016 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 PANTHER PTHR11748 240 317 5.8E-59 T 21-04-2016 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 SUPERFAMILY SSF56176 6 266 1.17E-74 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 PIRSF PIRSF000101 1 563 0.0 T 21-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 PANTHER PTHR11748:SF82 9 185 5.8E-59 T 21-04-2016 APL_RS03585 aea158b953c2ae3319fb7ca987a5a458 563 PANTHER PTHR11748:SF82 240 317 5.8E-59 T 21-04-2016 APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 PIRSF PIRSF000204 1 482 5.6E-232 T 21-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 Gene3D G3DSA:3.40.50.1220 305 481 7.8E-94 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 PANTHER PTHR10160 3 117 1.7E-243 T 21-04-2016 APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 PANTHER PTHR10160 136 482 1.7E-243 T 21-04-2016 APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 SUPERFAMILY SSF52467 307 481 1.03E-79 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS04405 7bed9e643e01f42956fe69859f603e92 482 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 478 8.4E-196 T 21-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 PANTHER PTHR30008 28 389 4.6E-175 T 21-04-2016 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 37 385 3.5E-136 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 Pfam PF02601 Exonuclease VII, large subunit 152 371 4.8E-84 T 21-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 Pfam PF02601 Exonuclease VII, large subunit 351 511 9.6E-23 T 21-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 PANTHER PTHR30008 435 516 4.6E-175 T 21-04-2016 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 Pfam PF13742 OB-fold nucleic acid binding domain 36 129 7.1E-31 T 21-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 PANTHER PTHR30008:SF0 435 516 4.6E-175 T 21-04-2016 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 33 514 30.519 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APL_RS04280 61a3c5daed5595ccda4b58d1066fdeca 517 PANTHER PTHR30008:SF0 28 389 4.6E-175 T 21-04-2016 APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 SMART SM00843 893 956 4.4E-29 T 21-04-2016 IPR018541 FtsK gamma domain APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 PANTHER PTHR22683:SF41 289 955 2.3E-256 T 21-04-2016 APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 ProDom PD414759 MEMBRANE CELL TRANSLOCASE DNA TRANSMEMBRANE FTSK DNA-BINDING NUCLEOTIDE-BINDING ATP-BINDING INNER 115 316 3.0E-35 T 21-04-2016 APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 PANTHER PTHR22683 289 955 2.3E-256 T 21-04-2016 APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 SUPERFAMILY SSF46785 894 955 7.86E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 SUPERFAMILY SSF52540 551 864 2.12E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 Pfam PF01580 FtsK/SpoIIIE family 579 791 8.2E-69 T 21-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 Pfam PF09397 Ftsk gamma domain 895 955 4.5E-25 T 21-04-2016 IPR018541 FtsK gamma domain APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 Gene3D G3DSA:3.40.50.300 553 858 3.9E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03240 edb5165f758f211ff6bd7b5baa4c9690 956 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 18 182 3.8E-20 T 21-04-2016 IPR025199 DNA translocase FtsK, 4TM region APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PANTHER PTHR30013:SF8 1 371 2.5E-228 T 21-04-2016 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PIRSF PIRSF000310 6 368 7.7E-130 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 157 181 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 230 248 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 45 67 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 114 137 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 254 280 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 68 92 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 209 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 212 229 2.5E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 PANTHER PTHR30013 1 371 2.5E-228 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 225 309 1.5E-24 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 Gene3D G3DSA:3.40.50.700 48 223 2.0E-60 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 12 365 7.6E-162 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 SUPERFAMILY SSF56770 45 308 5.89E-85 T 21-04-2016 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 60 205 7.4E-34 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 32 2.5E-5 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS06980 e29411e64645b0faf26ddf654e8306e6 380 Gene3D G3DSA:4.10.480.10 225 301 2.5E-29 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 SUPERFAMILY SSF52317 6 235 1.36E-58 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 SUPERFAMILY SSF54810 403 523 1.02E-50 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Gene3D G3DSA:3.30.300.10 399 523 4.4E-53 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PANTHER PTHR11922 2 520 2.9E-290 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Pfam PF00958 GMP synthase C terminal domain 431 522 1.0E-42 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Pfam PF02540 NAD synthase 221 285 2.1E-6 T 21-04-2016 IPR022310 NAD/GMP synthase APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 SUPERFAMILY SSF52402 192 444 3.53E-57 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 523 55.779 T 21-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Pfam PF00117 Glutamine amidotransferase class-I 11 197 1.6E-41 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Gene3D G3DSA:3.40.50.620 221 397 1.8E-55 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 203 3.0E-83 T 21-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.1E-7 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.1E-7 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.1E-7 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00097 Anthranilate synthase component II signature 175 188 1.6E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.6E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.6E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 523 1.2E-153 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PANTHER PTHR11922:SF2 2 520 2.9E-290 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 5.3E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 5.3E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 5.3E-6 T 21-04-2016 APL_RS03105 5f164bd141f4daf8aa6cc4c1ea930377 523 Gene3D G3DSA:3.40.50.880 3 220 1.6E-62 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS01360 41227627a3c4ed75c60323f85675a466 252 Gene3D G3DSA:3.40.190.10 111 213 4.8E-42 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 Gene3D G3DSA:3.40.190.10 1 110 3.1E-19 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 Gene3D G3DSA:3.40.190.10 215 251 3.1E-19 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 245 1.7E-63 T 21-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 PIRSF PIRSF004846 3 252 1.1E-67 T 21-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 SUPERFAMILY SSF53850 23 250 2.54E-63 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 PANTHER PTHR30632:SF0 8 252 1.2E-58 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 PANTHER PTHR30632 8 252 1.2E-58 T 21-04-2016 APL_RS01360 41227627a3c4ed75c60323f85675a466 252 Pfam PF13531 Bacterial extracellular solute-binding protein 25 248 3.7E-46 T 21-04-2016 APL_RS07570 e3f15d3981f7710474b1a88a428fe547 260 SUPERFAMILY SSF53098 94 253 1.82E-34 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS07570 e3f15d3981f7710474b1a88a428fe547 260 PANTHER PTHR32552 1 260 2.5E-70 T 21-04-2016 APL_RS07570 e3f15d3981f7710474b1a88a428fe547 260 Pfam PF13276 HTH-like domain 23 76 2.7E-15 T 21-04-2016 IPR025948 HTH-like domain APL_RS07570 e3f15d3981f7710474b1a88a428fe547 260 Pfam PF00665 Integrase core domain 99 214 2.3E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS07570 e3f15d3981f7710474b1a88a428fe547 260 Gene3D G3DSA:3.30.420.10 93 251 3.1E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Gene3D G3DSA:3.90.700.10 233 354 6.6E-35 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 SUPERFAMILY SSF51905 362 423 4.58E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 SUPERFAMILY SSF51905 2 250 4.58E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 5.8E-11 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-11 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PIRSF PIRSF000171 1 577 1.5E-45 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Gene3D G3DSA:1.20.58.100 428 542 4.8E-38 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PANTHER PTHR11632 1 583 0.0 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-6 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 2.2E-6 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 PANTHER PTHR11632:SF50 1 583 0.0 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 SUPERFAMILY SSF46977 445 594 1.06E-48 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 580 7.9E-41 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Gene3D G3DSA:4.10.80.40 543 576 4.6E-17 T 21-04-2016 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Gene3D G3DSA:3.50.50.60 355 418 1.3E-105 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Gene3D G3DSA:3.50.50.60 2 232 1.3E-105 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 21-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 Pfam PF00890 FAD binding domain 7 398 6.5E-112 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 580 4.1E-236 T 21-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 5 581 0.0 T 21-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 APL_RS08080 bc145bc256308efb36e78f7c6952ceb7 599 SUPERFAMILY SSF56425 227 359 3.74E-39 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 Gene3D G3DSA:3.40.50.1980 176 346 1.9E-37 T 21-04-2016 APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 PANTHER PTHR30535:SF5 8 368 4.6E-61 T 21-04-2016 APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 PANTHER PTHR30535 8 368 4.6E-61 T 21-04-2016 APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 Pfam PF01497 Periplasmic binding protein 55 315 5.5E-48 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 SUPERFAMILY SSF53807 28 338 3.26E-46 T 21-04-2016 APL_RS09540 c1b37d4ae2925bf202b79073d4fc126c 368 Gene3D G3DSA:3.40.50.1980 43 175 1.6E-15 T 21-04-2016 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 159 27.185 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 PANTHER PTHR10938 1 159 9.4E-68 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 SUPERFAMILY SSF55200 70 159 1.57E-33 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 SUPERFAMILY SSF54364 2 66 3.79E-26 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 21-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 157 3.8E-36 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 Gene3D G3DSA:3.30.110.10 67 159 9.6E-39 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 Gene3D G3DSA:3.10.20.80 1 66 3.6E-31 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 159 1.1E-71 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APL_RS01140 0d30932baf37fe76e09090f67e6ed36a 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 64 5.2E-29 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 Gene3D G3DSA:3.40.50.1980 46 176 1.6E-18 T 21-04-2016 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 PANTHER PTHR30535:SF5 21 370 2.2E-63 T 21-04-2016 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 Pfam PF01497 Periplasmic binding protein 67 314 3.6E-42 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 PANTHER PTHR30535 21 370 2.2E-63 T 21-04-2016 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 SUPERFAMILY SSF53807 28 339 1.18E-51 T 21-04-2016 APL_RS09520 1f3f0cd0b26920767a32610ae4a3e602 371 Gene3D G3DSA:3.40.50.1980 177 349 2.7E-38 T 21-04-2016 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 PANTHER PTHR19136 12 274 3.1E-133 T 21-04-2016 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 271 55.625 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 SUPERFAMILY SSF51161 2 255 1.8E-80 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Gene3D G3DSA:2.160.10.10 88 254 4.9E-65 T 21-04-2016 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 PANTHER PTHR19136:SF52 12 274 3.1E-133 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 174 208 5.8E-14 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 2 68 5.1E-27 T 21-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 272 4.1E-151 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Gene3D G3DSA:1.10.166.10 1 69 4.6E-33 T 21-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APL_RS09905 5a7c9f97da057f95d566825fd8b91754 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 3.9E-5 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 263 366 8.0E-23 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 PANTHER PTHR22976:SF17 1 379 8.4E-202 T 21-04-2016 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 9 373 7.0E-162 T 21-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 Gene3D G3DSA:3.20.20.70 45 326 1.6E-45 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 Pfam PF04055 Radical SAM superfamily 87 223 2.2E-9 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 SMART SM00876 263 367 7.7E-34 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 PANTHER PTHR22976 1 379 8.4E-202 T 21-04-2016 APL_RS02825 e24cfe0477faf7a05b9eb880693f3f60 381 SUPERFAMILY SSF102114 44 369 1.57E-51 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82714 184 265 8.37E-14 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82693 556 651 1.26E-16 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82866 787 1013 2.22E-43 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.1E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1011 1.9E-249 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82714 708 788 5.62E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:1.20.1640.10 286 499 6.0E-52 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:1.20.1640.10 826 1022 1.8E-50 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.70.1430 41 141 7.4E-25 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PANTHER PTHR32063:SF28 1 1025 0.0 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82693 268 324 6.54E-18 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82693 138 181 6.54E-18 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.2090.10 184 264 1.6E-15 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.2090.10 704 787 5.2E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82866 293 489 1.44E-43 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 SUPERFAMILY SSF82693 41 133 2.35E-20 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.70.1430 559 652 3.3E-14 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 PANTHER PTHR32063 1 1025 0.0 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.70.1440 656 700 2.2E-7 T 21-04-2016 APL_RS03080 99578845ad4d15304ffed706d8f1fa64 1039 Gene3D G3DSA:3.30.70.1440 797 825 2.2E-7 T 21-04-2016 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 SUPERFAMILY SSF47060 3 89 1.91E-33 T 21-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 PANTHER PTHR23321 1 89 3.6E-46 T 21-04-2016 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 5.0E-39 T 21-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.867 T 21-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 Gene3D G3DSA:1.10.287.10 3 89 1.2E-37 T 21-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-30 T 21-04-2016 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-36 T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05260 efdecf61172789a1191e7a46c57c028b 89 SMART SM01387 8 88 1.2E-49 T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS04300 60a3da98b249bc8673ccd6992a145dae 200 Pfam PF09335 SNARE associated Golgi protein 29 156 6.1E-25 T 21-04-2016 IPR032816 SNARE associated Golgi protein APL_RS04300 60a3da98b249bc8673ccd6992a145dae 200 PANTHER PTHR30353:SF1 1 196 5.3E-59 T 21-04-2016 APL_RS04300 60a3da98b249bc8673ccd6992a145dae 200 PANTHER PTHR30353 1 196 5.3E-59 T 21-04-2016 IPR032818 DedA family APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 SUPERFAMILY SSF46626 314 455 6.34E-36 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 PANTHER PTHR30600:SF7 45 461 1.4E-141 T 21-04-2016 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Gene3D G3DSA:1.10.3820.10 43 76 2.4E-4 T 21-04-2016 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Pfam PF14376 Haem-binding domain 16 149 1.9E-32 T 21-04-2016 IPR025992 Haem-binding domain APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Gene3D G3DSA:1.10.760.10 170 318 4.0E-46 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Gene3D G3DSA:1.10.760.10 319 456 9.8E-44 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 SMART SM01235 13 152 9.6E-57 T 21-04-2016 IPR025992 Haem-binding domain APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Pfam PF03150 Di-haem cytochrome c peroxidase 181 327 6.7E-47 T 21-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 PANTHER PTHR30600 45 461 1.4E-141 T 21-04-2016 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 SUPERFAMILY SSF46626 164 315 2.96E-43 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS07295 5b745d94912be2041639a1ce37cf0091 466 Pfam PF00034 Cytochrome c 335 451 1.1E-6 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS06685 969d3979d6167582174e875989a71b3e 86 SUPERFAMILY SSF143011 1 83 1.7E-31 T 21-04-2016 APL_RS06685 969d3979d6167582174e875989a71b3e 86 PANTHER PTHR38039 1 85 2.3E-38 T 21-04-2016 APL_RS06685 969d3979d6167582174e875989a71b3e 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 2.3E-38 T 21-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 APL_RS06685 969d3979d6167582174e875989a71b3e 86 PANTHER PTHR38039:SF1 1 85 2.3E-38 T 21-04-2016 APL_RS06685 969d3979d6167582174e875989a71b3e 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 5.6E-42 T 21-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 APL_RS00470 883acde18f0e617553d8745f6b38ba54 282 SUPERFAMILY SSF103481 39 137 7.59E-11 T 21-04-2016 APL_RS00470 883acde18f0e617553d8745f6b38ba54 282 PANTHER PTHR22911 6 282 1.4E-47 T 21-04-2016 APL_RS00470 883acde18f0e617553d8745f6b38ba54 282 Pfam PF00892 EamA-like transporter family 148 278 9.3E-23 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS00470 883acde18f0e617553d8745f6b38ba54 282 Pfam PF00892 EamA-like transporter family 13 136 1.4E-9 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS00470 883acde18f0e617553d8745f6b38ba54 282 SUPERFAMILY SSF103481 182 281 1.83E-17 T 21-04-2016 APL_RS09190 f2e50843d4c4c71d533513ad330f2935 76 Gene3D G3DSA:2.10.260.10 1 72 9.8E-4 T 21-04-2016 APL_RS09190 f2e50843d4c4c71d533513ad330f2935 76 PANTHER PTHR37550 1 76 4.2E-35 T 21-04-2016 APL_RS09190 f2e50843d4c4c71d533513ad330f2935 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 53 7.0E-9 T 21-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APL_RS09190 f2e50843d4c4c71d533513ad330f2935 76 PANTHER PTHR37550:SF2 1 76 4.2E-35 T 21-04-2016 APL_RS09190 f2e50843d4c4c71d533513ad330f2935 76 SUPERFAMILY SSF89447 1 65 5.75E-9 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PANTHER PTHR30408:SF8 168 502 3.1E-179 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PANTHER PTHR30408 168 502 3.1E-179 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 218 232 3.5E-21 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 292 304 3.5E-21 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 326 350 3.5E-21 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 3.5E-21 T 21-04-2016 APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 SUPERFAMILY SSF53335 2 34 3.18E-135 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 SUPERFAMILY SSF53335 75 520 3.18E-135 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 Pfam PF12161 HsdM N-terminal domain 2 134 8.7E-20 T 21-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 Gene3D G3DSA:3.40.50.150 197 422 8.2E-34 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03310 875ec2ea6950156a4aca3304c102360d 521 Pfam PF02384 N-6 DNA Methylase 171 483 3.8E-124 T 21-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 Pfam PF01782 RimM N-terminal domain 8 87 4.8E-25 T 21-04-2016 IPR002676 RimM protein GO:0006364 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 9.7E-56 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 PANTHER PTHR33692 8 172 3.5E-62 T 21-04-2016 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 SUPERFAMILY SSF50346 99 175 3.34E-21 T 21-04-2016 IPR011033 PRC-barrel-like APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 PANTHER PTHR33692:SF1 8 172 3.5E-62 T 21-04-2016 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 Gene3D G3DSA:2.40.30.60 3 93 5.0E-31 T 21-04-2016 IPR002676 RimM protein GO:0006364 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 SUPERFAMILY SSF50447 8 93 3.88E-24 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 Gene3D G3DSA:2.30.30.240 99 175 3.1E-31 T 21-04-2016 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 175 24.19 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APL_RS09500 d05ed490f62087f74f94f7b5d25361c7 175 Pfam PF05239 PRC-barrel domain 97 170 2.2E-8 T 21-04-2016 IPR027275 PRC-barrel domain APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 Pfam PF00005 ABC transporter 17 165 1.4E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 SUPERFAMILY SSF52540 4 232 7.99E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 PANTHER PTHR24220 3 250 6.8E-102 T 21-04-2016 APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 PANTHER PTHR24220:SF266 3 250 6.8E-102 T 21-04-2016 APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 Gene3D G3DSA:3.40.50.300 4 235 3.1E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS10665 fd0490def0b3a96e6c25e149b99189bf 254 SMART SM00382 26 214 9.3E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 Gene3D G3DSA:1.10.3080.10 23 452 7.4E-71 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PANTHER PTHR11689:SF14 11 438 3.5E-38 T 21-04-2016 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 Pfam PF00654 Voltage gated chloride channel 79 430 2.9E-71 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PANTHER PTHR11689 11 438 3.5E-38 T 21-04-2016 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 SUPERFAMILY SSF81340 13 449 3.79E-91 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 126 145 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 350 370 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 398 417 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 182 201 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 92 109 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS03520 943cd8040f1d672279c7f9f0cf2f304d 468 PRINTS PR00762 Chloride channel signature 380 396 1.4E-24 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 362 380 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 449 471 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 427 443 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.8E-83 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 SUPERFAMILY SSF55031 204 303 4.36E-7 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS01320 d25c397731daaf876379ab4971d01364 484 Gene3D G3DSA:3.40.630.10 396 480 1.7E-101 T 21-04-2016 APL_RS01320 d25c397731daaf876379ab4971d01364 484 Gene3D G3DSA:3.40.630.10 1 181 1.7E-101 T 21-04-2016 APL_RS01320 d25c397731daaf876379ab4971d01364 484 Pfam PF07687 Peptidase dimerisation domain 206 290 2.1E-10 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS01320 d25c397731daaf876379ab4971d01364 484 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 480 3.1E-184 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 Gene3D G3DSA:3.30.70.360 203 301 1.7E-6 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS01320 d25c397731daaf876379ab4971d01364 484 Pfam PF01546 Peptidase family M20/M25/M40 72 479 1.4E-16 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APL_RS01320 d25c397731daaf876379ab4971d01364 484 PIRSF PIRSF016599 1 484 6.8E-202 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APL_RS01320 d25c397731daaf876379ab4971d01364 484 SUPERFAMILY SSF53187 396 480 1.31E-58 T 21-04-2016 APL_RS01320 d25c397731daaf876379ab4971d01364 484 SUPERFAMILY SSF53187 12 182 1.31E-58 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 Pfam PF13437 HlyD family secretion protein 328 438 6.5E-15 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 Gene3D G3DSA:2.40.50.100 97 129 1.2E-12 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 Gene3D G3DSA:2.40.50.100 326 361 1.2E-12 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PANTHER PTHR30386:SF8 27 150 2.8E-73 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PANTHER PTHR30386:SF8 193 478 2.8E-73 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PANTHER PTHR30386 27 150 2.8E-73 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PANTHER PTHR30386 193 478 2.8E-73 T 21-04-2016 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 56 478 3.0E-112 T 21-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 ProSitePatterns PS00543 HlyD family secretion proteins signature. 442 464 - T 21-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 442 457 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 398 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 398 421 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 457 477 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 362 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07615 4f1bdef35461dfd598e904df4d4593e1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 4.2E-60 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 38 59 7.7E-5 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 7.7E-5 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 7.7E-5 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 Pfam PF01061 ABC-2 type transporter 18 223 3.8E-30 T 21-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 PANTHER PTHR30413 13 263 5.6E-55 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS07720 2d7eccecd9e5a509af43fb073d6939f6 263 PANTHER PTHR30413:SF8 13 263 5.6E-55 T 21-04-2016 APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 SMART SM00749 55 118 9.3E-12 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 SMART SM00749 133 195 8.6E-9 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 Pfam PF04972 BON domain 129 193 2.8E-16 T 21-04-2016 IPR007055 BON domain APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 Pfam PF04972 BON domain 50 117 4.8E-13 T 21-04-2016 IPR007055 BON domain APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 PANTHER PTHR34606 15 195 8.9E-68 T 21-04-2016 APL_RS07180 e97211f09ab587cef4e777ead5ffe0a5 195 PANTHER PTHR34606:SF4 15 195 8.9E-68 T 21-04-2016 APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 PANTHER PTHR33295 1 404 6.4E-104 T 21-04-2016 APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 SUPERFAMILY SSF52980 288 374 8.94E-7 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 SUPERFAMILY SSF52540 7 177 1.13E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 PANTHER PTHR33295:SF5 1 404 6.4E-104 T 21-04-2016 APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 Pfam PF13173 AAA domain 20 135 1.5E-22 T 21-04-2016 APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 Gene3D G3DSA:3.40.50.300 6 48 2.2E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 Gene3D G3DSA:3.40.1350.10 300 366 5.1E-4 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APL_RS03470 ce8036ccef14dfe62f118e205d301d44 407 Pfam PF13635 Domain of unknown function (DUF4143) 196 355 4.9E-27 T 21-04-2016 IPR025420 Domain of unknown function DUF4143 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 145 7.8E-13 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 Gene3D G3DSA:2.40.170.20 160 663 5.1E-110 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 Gene3D G3DSA:2.170.130.10 21 157 9.4E-29 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 PANTHER PTHR32552 22 663 3.3E-116 T 21-04-2016 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 SUPERFAMILY SSF56935 20 663 3.43E-115 T 21-04-2016 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 48 663 5.4E-82 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 Pfam PF00593 TonB dependent receptor 435 662 1.7E-27 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10680 a381120fd0bf8d6d60562716dc966037 663 PANTHER PTHR32552:SF17 22 663 3.3E-116 T 21-04-2016 APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 Gene3D G3DSA:3.40.50.1240 1 155 2.7E-38 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 SUPERFAMILY SSF53254 1 154 1.7E-22 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 3.6E-37 T 21-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 SMART SM00855 2 127 1.1E-6 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 PANTHER PTHR20935 1 118 2.8E-22 T 21-04-2016 APL_RS00965 982a90d888f9f522b4f2bc4a302a2e89 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 104 9.4E-12 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Pfam PF01966 HD domain 58 154 1.7E-7 T 21-04-2016 IPR006674 HD domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Gene3D G3DSA:1.10.3550.10 363 439 3.6E-4 T 21-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Pfam PF13286 Phosphohydrolase-associated domain 351 439 5.3E-24 T 21-04-2016 IPR026875 Phosphohydrolase-associated domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 SMART SM00471 54 274 1.8E-8 T 21-04-2016 IPR003607 HD/PDEase domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Gene3D G3DSA:1.10.3410.10 261 362 1.9E-27 T 21-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Gene3D G3DSA:1.10.3210.10 4 260 4.1E-69 T 21-04-2016 IPR006674 HD domain APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 SUPERFAMILY SSF109604 18 179 4.0E-75 T 21-04-2016 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 SUPERFAMILY SSF109604 242 439 4.0E-75 T 21-04-2016 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 PANTHER PTHR11373:SF25 16 175 9.8E-48 T 21-04-2016 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 PANTHER PTHR11373 16 175 9.8E-48 T 21-04-2016 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 441 31.902 T 21-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 APL_RS01620 19d8d5eea7b5ad20a731af7799ddcaa1 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 20 441 7.1E-112 T 21-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APL_RS10810 cc4175a643e6a2ae5a0e1ea3c74aa475 288 PANTHER PTHR31350:SF1 6 284 9.1E-27 T 21-04-2016 APL_RS10810 cc4175a643e6a2ae5a0e1ea3c74aa475 288 Pfam PF13371 Tetratricopeptide repeat 205 272 8.1E-21 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10810 cc4175a643e6a2ae5a0e1ea3c74aa475 288 PANTHER PTHR31350 6 284 9.1E-27 T 21-04-2016 APL_RS10810 cc4175a643e6a2ae5a0e1ea3c74aa475 288 Pfam PF13369 Transglutaminase-like superfamily 49 200 6.6E-38 T 21-04-2016 IPR032698 Protein SirB1, N-terminal APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 PANTHER PTHR11046 5 184 1.2E-116 T 21-04-2016 APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 SMART SM00479 8 181 3.4E-23 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 PANTHER PTHR11046:SF1 5 184 1.2E-116 T 21-04-2016 APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 SUPERFAMILY SSF53098 5 181 3.92E-47 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 42.947 T 21-04-2016 IPR022894 Oligoribonuclease GO:0016788 APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 Gene3D G3DSA:3.30.420.10 6 180 3.5E-73 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05910 c749bfe6d66bfba04235ef74479482a6 184 Pfam PF00929 Exonuclease 10 171 3.1E-39 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS08950 3489721736e172ccd182c6b8077a70f7 144 Pfam PF05025 RbsD / FucU transport protein family 3 141 7.1E-38 T 21-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APL_RS08950 3489721736e172ccd182c6b8077a70f7 144 SUPERFAMILY SSF102546 1 141 1.7E-43 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APL_RS08950 3489721736e172ccd182c6b8077a70f7 144 Gene3D G3DSA:3.40.1650.10 1 142 9.8E-55 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APL_RS08950 3489721736e172ccd182c6b8077a70f7 144 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 142 48.241 T 21-04-2016 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 UniPathway: UPA00956 APL_RS08950 3489721736e172ccd182c6b8077a70f7 144 PANTHER PTHR31690 1 142 4.2E-64 T 21-04-2016 APL_RS10620 f249c17a8bfcd8d720ff1c655e9c496b 225 Pfam PF00156 Phosphoribosyl transferase domain 136 223 1.0E-6 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS10620 f249c17a8bfcd8d720ff1c655e9c496b 225 PANTHER PTHR11907 7 224 2.0E-58 T 21-04-2016 APL_RS10620 f249c17a8bfcd8d720ff1c655e9c496b 225 PANTHER PTHR11907:SF9 7 224 2.0E-58 T 21-04-2016 APL_RS10620 f249c17a8bfcd8d720ff1c655e9c496b 225 Gene3D G3DSA:3.40.50.2020 48 224 1.0E-27 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS10620 f249c17a8bfcd8d720ff1c655e9c496b 225 SUPERFAMILY SSF53271 47 223 1.44E-35 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS01385 d163cf1e8ba304b2bffd9ce2bb155fec 210 PANTHER PTHR35568:SF1 2 207 5.7E-30 T 21-04-2016 APL_RS01385 d163cf1e8ba304b2bffd9ce2bb155fec 210 Pfam PF13309 HTH domain 144 204 3.0E-18 T 21-04-2016 APL_RS01385 d163cf1e8ba304b2bffd9ce2bb155fec 210 Pfam PF08348 YheO-like PAS domain 7 112 2.2E-31 T 21-04-2016 IPR013559 YheO-like APL_RS01385 d163cf1e8ba304b2bffd9ce2bb155fec 210 PANTHER PTHR35568 2 207 5.7E-30 T 21-04-2016 APL_RS01385 d163cf1e8ba304b2bffd9ce2bb155fec 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 2 112 6.0E-55 T 21-04-2016 IPR013559 YheO-like APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 PANTHER PTHR30614:SF10 1 222 3.8E-135 T 21-04-2016 APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 216 3.3E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 SUPERFAMILY SSF161098 9 208 1.24E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 111 4.8E-13 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 PANTHER PTHR30614 1 222 3.8E-135 T 21-04-2016 APL_RS07110 09548c482d2085fc0af2fd930e4deeac 227 Gene3D G3DSA:1.10.3720.10 6 216 4.2E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08835 c29ac53d403103af7535218f62168774 260 Pfam PF13276 HTH-like domain 23 76 2.7E-15 T 21-04-2016 IPR025948 HTH-like domain APL_RS08835 c29ac53d403103af7535218f62168774 260 SUPERFAMILY SSF53098 94 253 1.18E-34 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS08835 c29ac53d403103af7535218f62168774 260 PANTHER PTHR32552 1 260 2.1E-71 T 21-04-2016 APL_RS08835 c29ac53d403103af7535218f62168774 260 Gene3D G3DSA:3.30.420.10 93 251 3.3E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS08835 c29ac53d403103af7535218f62168774 260 Pfam PF00665 Integrase core domain 99 214 2.5E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 SUPERFAMILY SSF53720 6 484 7.2E-165 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 PANTHER PTHR11699 1 488 2.7E-268 T 21-04-2016 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 PANTHER PTHR11699:SF97 1 488 2.7E-268 T 21-04-2016 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 Gene3D G3DSA:3.40.309.10 267 456 1.4E-68 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 Pfam PF00171 Aldehyde dehydrogenase family 19 481 3.8E-172 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 Gene3D G3DSA:3.40.605.10 10 266 1.9E-92 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APL_RS10655 5f9dbf5f4f5981b0f03847456b8bbd23 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 SUPERFAMILY SSF102405 125 329 3.21E-39 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 Pfam PF11892 Domain of unknown function (DUF3412) 333 453 3.3E-53 T 21-04-2016 IPR021826 Protein of unknown function DUF3412 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 PANTHER PTHR31223 359 384 1.5E-147 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 PANTHER PTHR31223 84 342 1.5E-147 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 Pfam PF03641 Possible lysine decarboxylase 190 329 3.7E-32 T 21-04-2016 IPR031100 LOG family APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 PANTHER PTHR31223:SF12 359 384 1.5E-147 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 PANTHER PTHR31223:SF12 84 342 1.5E-147 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 Gene3D G3DSA:3.40.50.450 126 453 4.5E-120 T 21-04-2016 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 Gene3D G3DSA:3.30.1850.10 4 110 1.5E-48 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 APL_RS00750 4e1d599418aa0d394f73d805e71b4a4d 459 Pfam PF14793 Domain of unknown function (DUF4478) 6 110 3.5E-45 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 PANTHER PTHR20941 1 148 4.5E-64 T 21-04-2016 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 4.1E-42 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 SUPERFAMILY SSF55083 1 153 3.27E-52 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 Gene3D G3DSA:3.30.70.560 3 153 3.5E-54 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS00910 523c10bc9b28c232d26b5113cf33c188 156 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 131 2.3E-36 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Gene3D G3DSA:3.40.50.1000 1 159 2.3E-39 T 21-04-2016 IPR023214 HAD-like domain APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 327 339 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 PANTHER PTHR23133:SF2 10 96 4.0E-172 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 PANTHER PTHR23133:SF2 171 363 4.0E-172 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 SUPERFAMILY SSF54211 175 259 1.64E-32 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Gene3D G3DSA:3.30.230.40 175 261 1.0E-39 T 21-04-2016 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 PANTHER PTHR23133 10 96 4.0E-172 T 21-04-2016 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 PANTHER PTHR23133 171 363 4.0E-172 T 21-04-2016 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 SUPERFAMILY SSF56784 2 157 1.12E-36 T 21-04-2016 IPR023214 HAD-like domain APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 175 363 36.86 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 161 1.3E-79 T 21-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Gene3D G3DSA:3.30.230.40 266 363 1.4E-32 T 21-04-2016 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 363 56.742 T 21-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 145 7.7E-51 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 204 345 4.4E-64 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 147 3.8E-24 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 SUPERFAMILY SSF54211 260 350 2.66E-31 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS10715 99b8164a12180f553db8a3580e5c2677 363 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 234 247 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 21-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 Gene3D G3DSA:3.40.50.1860 3 172 4.7E-47 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 PANTHER PTHR21198 1 264 2.6E-88 T 21-04-2016 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 213 2.9E-27 T 21-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 SUPERFAMILY SSF53681 5 106 2.29E-29 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 SUPERFAMILY SSF53681 108 262 2.83E-31 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 PANTHER PTHR21198:SF2 1 264 2.6E-88 T 21-04-2016 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 Hamap MF_00258 Glutamate racemase [murI]. 3 262 32.011 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 247 2.5E-71 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS09790 7fb0d001da8c400b3756660807fe36a1 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 21-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS01000 27c278b70b81429eec75532b7862753d 855 Gene3D G3DSA:3.40.710.10 673 817 2.0E-123 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 Gene3D G3DSA:3.40.710.10 406 594 2.0E-123 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 Gene3D G3DSA:3.40.710.10 230 312 2.0E-123 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 Pfam PF17092 Penicillin-binding protein OB-like domain 315 409 1.9E-11 T 21-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282:SF5 405 595 1.0E-247 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282:SF5 1 309 1.0E-247 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282:SF5 672 821 1.0E-247 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 Pfam PF00905 Penicillin binding protein transpeptidase domain 413 588 1.9E-21 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APL_RS01000 27c278b70b81429eec75532b7862753d 855 Gene3D G3DSA:2.40.50.140 345 405 3.7E-6 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01000 27c278b70b81429eec75532b7862753d 855 SUPERFAMILY SSF53955 43 252 4.78E-75 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS01000 27c278b70b81429eec75532b7862753d 855 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 774 2.8E-166 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 Pfam PF00912 Transglycosylase 55 227 8.1E-63 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APL_RS01000 27c278b70b81429eec75532b7862753d 855 Gene3D G3DSA:1.10.3810.10 55 229 2.8E-73 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 SUPERFAMILY SSF56601 209 231 1.63E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 SUPERFAMILY SSF56601 672 820 1.63E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 SUPERFAMILY SSF56601 260 312 1.63E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 SUPERFAMILY SSF56601 406 593 1.63E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282 405 595 1.0E-247 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282 1 309 1.0E-247 T 21-04-2016 APL_RS01000 27c278b70b81429eec75532b7862753d 855 PANTHER PTHR32282 672 821 1.0E-247 T 21-04-2016 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 PANTHER PTHR11709 2 286 2.0E-64 T 21-04-2016 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Pfam PF07732 Multicopper oxidase 55 167 6.2E-23 T 21-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 SUPERFAMILY SSF49503 25 168 2.66E-21 T 21-04-2016 IPR008972 Cupredoxin APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Gene3D G3DSA:2.60.40.420 32 171 8.2E-18 T 21-04-2016 IPR008972 Cupredoxin APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 PANTHER PTHR11709:SF69 2 286 2.0E-64 T 21-04-2016 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 SUPERFAMILY SSF49503 355 468 3.66E-12 T 21-04-2016 IPR008972 Cupredoxin APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Pfam PF07731 Multicopper oxidase 357 440 5.0E-5 T 21-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 2 469 59.332 T 21-04-2016 IPR026589 Cell division protein FtsP GO:0043093 APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Gene3D G3DSA:2.60.40.420 172 286 1.3E-22 T 21-04-2016 IPR008972 Cupredoxin APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 Gene3D G3DSA:2.60.40.420 363 468 6.7E-8 T 21-04-2016 IPR008972 Cupredoxin APL_RS07845 75fd5b07427f22e49922b13eb5c1d984 470 SUPERFAMILY SSF49503 172 294 1.53E-24 T 21-04-2016 IPR008972 Cupredoxin APL_RS04945 72361d9304d6dcc4a9b8e839eb3fddd1 373 SMART SM01126 140 302 1.4E-43 T 21-04-2016 IPR024445 ISXO2-like transposase domain APL_RS04945 72361d9304d6dcc4a9b8e839eb3fddd1 373 Pfam PF12762 ISXO2-like transposase domain 140 302 7.8E-47 T 21-04-2016 IPR024445 ISXO2-like transposase domain APL_RS04945 72361d9304d6dcc4a9b8e839eb3fddd1 373 Pfam PF12760 Transposase zinc-ribbon domain 22 72 2.5E-15 T 21-04-2016 IPR024442 Transposase, zinc-ribbon APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 PANTHER PTHR23135:SF4 8 500 5.3E-204 T 21-04-2016 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 SUPERFAMILY SSF63418 20 110 1.57E-19 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 500 9.6E-171 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 SUPERFAMILY SSF53623 112 343 3.79E-76 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Pfam PF08245 Mur ligase middle domain 121 322 1.6E-51 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 SUPERFAMILY SSF53244 344 500 9.81E-50 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 PANTHER PTHR23135 8 500 5.3E-204 T 21-04-2016 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 500 35.205 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Gene3D G3DSA:3.40.1390.10 20 110 3.6E-27 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Pfam PF01225 Mur ligase family, catalytic domain 23 109 5.8E-15 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Pfam PF02875 Mur ligase family, glutamate ligase domain 344 433 3.0E-21 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Gene3D G3DSA:3.40.1190.10 112 347 1.6E-76 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00065 0c6d6544f93aa0a390cc28bd857d6c29 500 Gene3D G3DSA:3.90.190.20 348 494 9.7E-58 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS07440 8b832ea22eb94bbd82cba4955b7853c2 297 PANTHER PTHR10067 3 297 5.4E-105 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APL_RS07440 8b832ea22eb94bbd82cba4955b7853c2 297 Pfam PF02666 Phosphatidylserine decarboxylase 73 293 1.2E-58 T 21-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APL_RS07440 8b832ea22eb94bbd82cba4955b7853c2 297 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 59 294 5.0E-91 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APL_RS07440 8b832ea22eb94bbd82cba4955b7853c2 297 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 20 296 48.653 T 21-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APL_RS10025 5f468c63d0e07e65202fd38a2d0a6b58 218 Pfam PF10833 Protein of unknown function (DUF2572) 10 207 8.8E-8 T 21-04-2016 IPR022543 Protein of unknown function DUF2572 APL_RS03765 5de7d3187a82344609119197edee05c4 382 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 363 56.919 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 PANTHER PTHR21148:SF26 1 372 1.4E-183 T 21-04-2016 APL_RS03765 5de7d3187a82344609119197edee05c4 382 SUPERFAMILY SSF51713 1 368 4.45E-161 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 Gene3D G3DSA:3.20.20.105 1 371 1.8E-165 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 365 2.5E-94 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 373 1.4E-186 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 373 1.6E-175 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APL_RS03765 5de7d3187a82344609119197edee05c4 382 PANTHER PTHR21148 1 372 1.4E-183 T 21-04-2016 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.799 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 PANTHER PTHR11986 1 426 5.9E-234 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 SUPERFAMILY SSF53383 1 425 2.3E-138 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 PANTHER PTHR11986:SF5 1 426 5.9E-234 T 21-04-2016 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 4.0E-195 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 Pfam PF00202 Aminotransferase class-III 32 416 8.7E-77 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 Gene3D G3DSA:3.90.1150.10 2 69 5.0E-48 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 Gene3D G3DSA:3.90.1150.10 319 425 5.0E-48 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS08260 a311a02d178488d2cb81cd085cd4d4be 426 Gene3D G3DSA:3.40.640.10 70 315 8.1E-83 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 PANTHER PTHR21090 1 429 3.8E-210 T 21-04-2016 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 429 9.4E-145 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 431 35.978 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 PIRSF PIRSF000505 1 432 1.7E-154 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 Gene3D G3DSA:3.65.10.10 242 427 2.3E-68 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 Gene3D G3DSA:3.65.10.10 22 241 6.7E-71 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 SUPERFAMILY SSF55205 1 428 6.67E-141 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APL_RS03645 53b46748ae7be3b0adf271b2580ff490 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 423 6.1E-163 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 SUPERFAMILY SSF160964 13 262 1.44E-76 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Gene3D G3DSA:2.40.430.10 118 196 1.5E-26 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Gene3D G3DSA:3.10.650.10 197 271 1.4E-34 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 99 262 4.0E-55 T 21-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain APL_RS06465 f3fe067f71697a93584973df5a2da544 516 PANTHER PTHR30193 261 516 1.5E-135 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 PANTHER PTHR30193 36 104 1.5E-135 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 299 501 3.5E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 SUPERFAMILY SSF161098 263 505 1.44E-58 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Gene3D G3DSA:1.20.58.370 8 94 2.1E-28 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 PANTHER PTHR30193:SF22 261 516 1.5E-135 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 PANTHER PTHR30193:SF22 36 104 1.5E-135 T 21-04-2016 APL_RS06465 f3fe067f71697a93584973df5a2da544 516 Gene3D G3DSA:1.10.3720.10 277 512 1.9E-61 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 PIRSF PIRSF003135 5 112 8.5E-47 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 Pfam PF00436 Single-strand binding protein family 14 110 1.9E-8 T 21-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 SUPERFAMILY SSF50249 11 117 1.84E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 14 111 5.5E-31 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 Hamap MF_00720 Primosomal replication protein n [priB]. 12 111 26.708 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APL_RS06125 c7805d3cf915feaba7bb3f8c8f606f84 124 Gene3D G3DSA:2.40.50.140 7 119 3.3E-33 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 382 2.7E-165 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 Pfam PF02684 Lipid-A-disaccharide synthetase 8 380 1.2E-145 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 385 41.783 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 PANTHER PTHR30372 4 385 4.6E-132 T 21-04-2016 APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 SUPERFAMILY SSF53756 8 361 4.49E-28 T 21-04-2016 APL_RS00035 6b446aeefcda21be44931aa694133d6a 392 PANTHER PTHR30372:SF0 4 385 4.6E-132 T 21-04-2016 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 SUPERFAMILY SSF53850 6 223 1.65E-68 T 21-04-2016 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 Pfam PF08029 HisG, C-terminal domain 223 296 2.0E-23 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 5.9E-48 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 PANTHER PTHR21403 5 299 4.7E-126 T 21-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 21-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 Gene3D G3DSA:3.30.70.120 226 298 1.7E-29 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.125 T 21-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 PANTHER PTHR21403:SF0 5 299 4.7E-126 T 21-04-2016 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 SUPERFAMILY SSF54913 226 298 1.22E-21 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.1E-56 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 3.5E-29 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APL_RS10695 c4272d83d9da44eab2e91cdc042b066e 299 Gene3D G3DSA:3.40.190.10 2 139 2.0E-50 T 21-04-2016 APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 Gene3D G3DSA:2.30.130.30 1 101 7.5E-44 T 21-04-2016 APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 PIRSF PIRSF029143 1 102 1.6E-45 T 21-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 PANTHER PTHR38088 1 102 8.6E-50 T 21-04-2016 APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 SUPERFAMILY SSF88697 1 101 5.96E-34 T 21-04-2016 IPR015947 PUA-like domain APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 Pfam PF04266 ASCH domain 5 102 1.2E-19 T 21-04-2016 IPR007374 ASCH domain APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 SMART SM01022 4 102 1.6E-31 T 21-04-2016 IPR007374 ASCH domain APL_RS05975 92e52b3d5198fc1e8c252f8d5437b688 102 PANTHER PTHR38088:SF2 1 102 8.6E-50 T 21-04-2016 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 SUPERFAMILY SSF48163 310 473 1.57E-44 T 21-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PANTHER PTHR11451 14 329 4.9E-103 T 21-04-2016 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 316 3.7E-122 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 SUPERFAMILY SSF52374 14 309 2.95E-112 T 21-04-2016 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 15 472 33.641 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 14 476 2.0E-199 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 200 1.2E-26 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 47 60 1.2E-26 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 214 1.2E-26 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 43 1.2E-26 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 1.2E-26 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 32 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Gene3D G3DSA:1.10.10.350 374 473 9.2E-31 T 21-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 PANTHER PTHR11451:SF41 14 329 4.9E-103 T 21-04-2016 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Gene3D G3DSA:1.10.1160.10 244 325 5.0E-37 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Gene3D G3DSA:3.90.800.10 80 191 1.6E-37 T 21-04-2016 APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Gene3D G3DSA:3.40.50.620 14 79 1.6E-52 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS06670 685677ea4c12de28571e25e7eab79715 479 Gene3D G3DSA:3.40.50.620 192 242 1.6E-52 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Gene3D G3DSA:3.30.1360.40 240 333 3.0E-25 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 743 0.0 T 21-04-2016 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 SMART SM00434 13 463 1.4E-229 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Gene3D G3DSA:2.120.10.90 498 738 5.8E-31 T 21-04-2016 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 PANTHER PTHR10169:SF30 1 526 0.0 T 21-04-2016 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 SUPERFAMILY SSF56719 33 485 3.14E-152 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 PANTHER PTHR10169 1 526 0.0 T 21-04-2016 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 SUPERFAMILY SSF101904 499 743 1.57E-50 T 21-04-2016 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.9E-135 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.36 T 21-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 688 3.1E-4 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 598 635 0.0024 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Gene3D G3DSA:3.90.199.10 32 239 1.4E-103 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APL_RS03035 a45ef6fde12dae25213f59a9deb95abd 748 Gene3D G3DSA:3.90.199.10 335 400 1.4E-103 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APL_RS04510 e104ce0ec5b87153df11905bd40de512 247 SUPERFAMILY SSF55120 2 240 7.2E-66 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04510 e104ce0ec5b87153df11905bd40de512 247 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04510 e104ce0ec5b87153df11905bd40de512 247 Pfam PF00849 RNA pseudouridylate synthase 12 170 6.6E-33 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04510 e104ce0ec5b87153df11905bd40de512 247 PANTHER PTHR11079 2 245 1.7E-84 T 21-04-2016 APL_RS04510 e104ce0ec5b87153df11905bd40de512 247 PANTHER PTHR11079:SF60 2 245 1.7E-84 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.30.30.30 70 121 9.8E-12 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:1.20.1270.10 528 615 1.7E-26 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PANTHER PTHR19375 19 604 0.0 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.1E-263 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PANTHER PTHR19375:SF176 19 604 0.0 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 SUPERFAMILY SSF100920 383 536 1.83E-51 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:2.60.34.10 386 527 2.8E-55 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 SUPERFAMILY SSF53067 19 196 1.22E-54 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.90.640.10 239 309 1.7E-7 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.30.420.40 133 205 7.8E-55 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.30.420.40 20 69 7.8E-55 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 SUPERFAMILY SSF53067 200 376 6.48E-49 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.554 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 SUPERFAMILY SSF100934 503 615 1.45E-32 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 384 403 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 465 481 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.0E-53 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.30.420.40 206 238 5.4E-33 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Gene3D G3DSA:3.30.420.40 313 355 5.4E-33 T 21-04-2016 APL_RS04835 7eec88909a8fa57220c66fd1d1bbdc5d 617 Pfam PF00012 Hsp70 protein 21 599 3.2E-192 T 21-04-2016 IPR013126 Heat shock protein 70 family APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Gene3D G3DSA:3.40.50.300 2 192 4.7E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 SUPERFAMILY SSF54980 292 370 2.77E-18 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Gene3D G3DSA:2.40.30.10 193 289 8.5E-26 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Gene3D G3DSA:3.30.70.240 401 489 6.3E-20 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.2E-12 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 SUPERFAMILY SSF54980 399 493 4.22E-24 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 309.879 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PANTHER PTHR23115:SF175 3 373 2.3E-278 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PANTHER PTHR23115:SF175 397 595 2.3E-278 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PANTHER PTHR23115 3 373 2.3E-278 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 PANTHER PTHR23115 397 595 2.3E-278 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Gene3D G3DSA:3.30.70.870 291 369 1.2E-25 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.7E-49 T 21-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 0.0 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Pfam PF00679 Elongation factor G C-terminus 399 483 1.3E-18 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 2.6E-53 T 21-04-2016 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 173 3.8E-17 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS02850 2d11a5d194009d0b146ea63d86a9a97c 597 SUPERFAMILY SSF52540 2 235 1.13E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 325 1.1E-37 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 Gene3D G3DSA:3.40.50.720 7 118 2.4E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 PANTHER PTHR10996:SF18 1 369 8.6E-229 T 21-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 PANTHER PTHR10996 1 369 8.6E-229 T 21-04-2016 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 Gene3D G3DSA:3.30.70.260 323 408 2.2E-26 T 21-04-2016 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 SUPERFAMILY SSF51735 107 294 5.7E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 293 6.0E-52 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 Gene3D G3DSA:3.40.50.720 119 296 8.7E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 SUPERFAMILY SSF52283 6 137 3.97E-49 T 21-04-2016 APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APL_RS07665 eff3f04da0eb5363fb3ff2f7fca856b7 409 SUPERFAMILY SSF55021 337 408 3.04E-16 T 21-04-2016 APL_RS04345 8d4f4f7bf8c16e0083386614c6adb21d 608 PANTHER PTHR12815:SF12 48 608 1.6E-176 T 21-04-2016 APL_RS04345 8d4f4f7bf8c16e0083386614c6adb21d 608 Pfam PF01103 Surface antigen 323 606 2.9E-32 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APL_RS04345 8d4f4f7bf8c16e0083386614c6adb21d 608 Gene3D G3DSA:2.40.160.50 335 605 4.2E-20 T 21-04-2016 APL_RS04345 8d4f4f7bf8c16e0083386614c6adb21d 608 Pfam PF07244 Surface antigen variable number repeat 220 288 1.1E-6 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 APL_RS04345 8d4f4f7bf8c16e0083386614c6adb21d 608 PANTHER PTHR12815 48 608 1.6E-176 T 21-04-2016 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 Gene3D G3DSA:3.90.940.10 1 76 2.0E-14 T 21-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.821 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 Pfam PF01192 RNA polymerase Rpb6 11 59 3.6E-14 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 2.6E-28 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 PANTHER PTHR34476 2 91 8.1E-25 T 21-04-2016 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 SUPERFAMILY SSF63562 1 80 9.94E-23 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS09705 ed36613166a4f5a8dca54ed4aa1f6b42 91 SMART SM01409 8 61 2.4E-11 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APL_RS05190 d53623d5b5c4f7c143a7e8a68a74f559 359 PANTHER PTHR31302:SF0 40 357 1.0E-51 T 21-04-2016 APL_RS05190 d53623d5b5c4f7c143a7e8a68a74f559 359 Pfam PF00149 Calcineurin-like phosphoesterase 140 302 3.8E-13 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS05190 d53623d5b5c4f7c143a7e8a68a74f559 359 Gene3D G3DSA:3.60.21.10 139 310 3.3E-24 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS05190 d53623d5b5c4f7c143a7e8a68a74f559 359 SUPERFAMILY SSF56300 140 356 1.2E-35 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS05190 d53623d5b5c4f7c143a7e8a68a74f559 359 PANTHER PTHR31302 40 357 1.0E-51 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:3.30.1300.30 463 559 3.4E-31 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:1.20.5.170 178 219 2.0E-5 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:1.20.5.170 309 348 2.8E-8 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:1.20.5.170 65 84 2.0E-5 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Pfam PF03895 YadA-like C-terminal region 481 559 7.6E-25 T 21-04-2016 IPR005594 YadA-like, C-terminal APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:2.150.10.10 364 462 3.6E-4 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Gene3D G3DSA:2.150.10.10 16 64 1.8E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 SUPERFAMILY SSF101967 263 337 7.85E-8 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 SUPERFAMILY SSF101967 343 468 5.36E-6 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 309 332 4.0E-8 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 51 74 1.8E-8 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 445 464 2.2E-7 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 SUPERFAMILY SSF54523 457 559 6.59E-25 T 21-04-2016 APL_RS10845 5a5fd8d41e4748f08e3ed67ffeb5b1be 559 SUPERFAMILY SSF101967 15 79 1.57E-8 T 21-04-2016 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 SUPERFAMILY SSF102114 22 219 2.55E-23 T 21-04-2016 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 PANTHER PTHR30352 1 245 2.5E-139 T 21-04-2016 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 Pfam PF13353 4Fe-4S single cluster domain 15 124 1.4E-18 T 21-04-2016 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 8.4E-105 T 21-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 PANTHER PTHR30352:SF9 1 245 2.5E-139 T 21-04-2016 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 Pfam PF04055 Radical SAM superfamily 24 177 9.5E-29 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS05410 26397e751efe7ffe7566b8e610a1fb22 245 Gene3D G3DSA:3.80.30.10 69 244 6.1E-69 T 21-04-2016 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 SUPERFAMILY SSF89733 1 235 3.66E-67 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 Pfam PF02615 Malate/L-lactate dehydrogenase 1 233 3.3E-71 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 PANTHER PTHR11091:SF3 1 235 8.7E-150 T 21-04-2016 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 Gene3D G3DSA:3.30.60.50 84 122 8.4E-22 T 21-04-2016 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 PANTHER PTHR11091 1 235 8.7E-150 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 Gene3D G3DSA:3.30.1370.60 1 73 1.7E-44 T 21-04-2016 APL_RS08355 ca77f620031de6430bd8b3ee8b311ea5 235 Gene3D G3DSA:3.30.1370.60 123 172 1.7E-44 T 21-04-2016 APL_RS01430 60da89179c123813aac3eb65426121b3 656 PANTHER PTHR32552 42 656 1.6E-23 T 21-04-2016 APL_RS01430 60da89179c123813aac3eb65426121b3 656 SUPERFAMILY SSF56935 41 656 3.48E-78 T 21-04-2016 APL_RS01430 60da89179c123813aac3eb65426121b3 656 Gene3D G3DSA:2.40.170.20 142 656 2.7E-65 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01430 60da89179c123813aac3eb65426121b3 656 Pfam PF00593 TonB dependent receptor 407 655 1.4E-26 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS01430 60da89179c123813aac3eb65426121b3 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 128 7.9E-10 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS01430 60da89179c123813aac3eb65426121b3 656 Gene3D G3DSA:2.170.130.10 41 141 5.7E-14 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS00575 0b404cc22f4dffb8af7a403d41a01fed 106 Pfam PF05164 Cell division protein ZapA 6 87 9.0E-16 T 21-04-2016 IPR007838 Cell division protein ZapA-like APL_RS00575 0b404cc22f4dffb8af7a403d41a01fed 106 PANTHER PTHR34981:SF1 2 94 4.0E-16 T 21-04-2016 APL_RS00575 0b404cc22f4dffb8af7a403d41a01fed 106 PANTHER PTHR34981 2 94 4.0E-16 T 21-04-2016 APL_RS00575 0b404cc22f4dffb8af7a403d41a01fed 106 SUPERFAMILY SSF102829 6 95 1.83E-20 T 21-04-2016 IPR007838 Cell division protein ZapA-like APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 SUPERFAMILY SSF161098 89 276 6.0E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 291 3.3E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 PANTHER PTHR30465 7 295 8.4E-127 T 21-04-2016 APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 Gene3D G3DSA:1.10.3720.10 86 290 5.6E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 PANTHER PTHR30465:SF49 7 295 8.4E-127 T 21-04-2016 APL_RS04160 06ddebe7c90dae8288142d3a1178d8c2 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 66 9.4E-8 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APL_RS09130 9208899790861bea21c37bb67e52a617 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 1.4E-30 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APL_RS09130 9208899790861bea21c37bb67e52a617 122 Gene3D G3DSA:3.30.1390.10 52 122 2.0E-33 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APL_RS09130 9208899790861bea21c37bb67e52a617 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 3.5E-15 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09130 9208899790861bea21c37bb67e52a617 122 Gene3D G3DSA:1.20.5.710 2 51 2.6E-20 T 21-04-2016 APL_RS09130 9208899790861bea21c37bb67e52a617 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 7.8E-47 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09130 9208899790861bea21c37bb67e52a617 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.559 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09130 9208899790861bea21c37bb67e52a617 122 SUPERFAMILY SSF54736 51 122 5.58E-25 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APL_RS09130 9208899790861bea21c37bb67e52a617 122 SUPERFAMILY SSF48300 4 58 4.58E-15 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09130 9208899790861bea21c37bb67e52a617 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 101 5.0E-16 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APL_RS07435 61ebfcf0cd54f86a4a1ec851b3d7ae14 114 SUPERFAMILY SSF47781 38 113 2.11E-27 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS07435 61ebfcf0cd54f86a4a1ec851b3d7ae14 114 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 48 113 1.1E-27 T 21-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APL_RS07435 61ebfcf0cd54f86a4a1ec851b3d7ae14 114 Gene3D G3DSA:1.10.150.280 40 114 1.0E-19 T 21-04-2016 APL_RS07435 61ebfcf0cd54f86a4a1ec851b3d7ae14 114 Pfam PF12836 Helix-hairpin-helix motif 48 112 5.5E-23 T 21-04-2016 APL_RS07435 61ebfcf0cd54f86a4a1ec851b3d7ae14 114 PANTHER PTHR21180 33 113 4.2E-22 T 21-04-2016 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 300 610 9.8E-89 T 21-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Pfam PF00703 Glycosyl hydrolases family 2 210 298 1.8E-8 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PRINTS PR00132 Glycosyl hydrolase family 2 signature 340 358 1.5E-30 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.5E-30 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PRINTS PR00132 Glycosyl hydrolase family 2 signature 521 536 1.5E-30 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PRINTS PR00132 Glycosyl hydrolase family 2 signature 442 457 1.5E-30 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PRINTS PR00132 Glycosyl hydrolase family 2 signature 309 323 1.5E-30 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF49303 210 299 2.01E-19 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PANTHER PTHR10066:SF72 424 996 1.2E-256 T 21-04-2016 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PANTHER PTHR10066:SF72 37 396 1.2E-256 T 21-04-2016 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 350 375 - T 21-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Gene3D G3DSA:2.60.40.320 614 707 2.1E-19 T 21-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SMART SM01038 735 999 2.5E-110 T 21-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Gene3D G3DSA:2.70.98.10 721 998 1.1E-89 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Gene3D G3DSA:2.60.120.260 4 196 1.3E-69 T 21-04-2016 IPR008979 Galactose-binding domain-like APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Pfam PF16353 Domain of unknown function(DUF4981) 623 707 4.9E-12 T 21-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Gene3D G3DSA:3.20.20.80 299 609 3.1E-90 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF49303 617 708 5.18E-13 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PANTHER PTHR10066 424 996 1.2E-256 T 21-04-2016 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 PANTHER PTHR10066 37 396 1.2E-256 T 21-04-2016 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 442 456 - T 21-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 46 205 7.1E-44 T 21-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Pfam PF02929 Beta galactosidase small chain 738 997 1.4E-70 T 21-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF74650 720 999 8.63E-81 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF49785 5 206 2.41E-60 T 21-04-2016 IPR008979 Galactose-binding domain-like APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 Gene3D G3DSA:2.60.40.320 197 298 3.0E-20 T 21-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF51445 414 609 5.6E-83 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS05220 db89120835355d231ebb2b8c460defe0 1006 SUPERFAMILY SSF51445 300 386 5.6E-83 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 PIRSF PIRSF005639 3 191 4.7E-69 T 21-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 SUPERFAMILY SSF52317 7 189 1.28E-48 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 Gene3D G3DSA:3.40.50.880 6 191 6.2E-69 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 PANTHER PTHR31559 1 191 3.6E-81 T 21-04-2016 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 9 188 35.827 T 21-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 PANTHER PTHR31559:SF0 1 191 3.6E-81 T 21-04-2016 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 9 187 7.1E-69 T 21-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 Pfam PF01174 SNO glutamine amidotransferase family 11 189 2.7E-64 T 21-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03010 2ad11c9ccc133098dc7c987b68579292 191 ProSitePatterns PS01236 PdxT/SNO family family signature. 46 56 - T 21-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 Pfam PF07840 FadR C-terminal domain 76 238 8.1E-62 T 21-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 PANTHER PTHR11751:SF402 17 101 1.7E-51 T 21-04-2016 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 SMART SM00345 16 75 3.5E-20 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 SUPERFAMILY SSF46785 11 79 1.5E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 242 131.632 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 PANTHER PTHR11751 17 101 1.7E-51 T 21-04-2016 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 75 4.1E-19 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 SUPERFAMILY SSF48008 83 233 9.16E-59 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 6 238 3.3E-100 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 Gene3D G3DSA:1.20.120.530 85 240 8.4E-47 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 Gene3D G3DSA:1.10.10.10 11 79 1.6E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.5E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS01670 27863d512054ebf22136ea1c8b331ab3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.5E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 5.5E-120 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 SUPERFAMILY SSF51998 222 740 4.27E-166 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PANTHER PTHR11573 6 747 0.0 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PANTHER PTHR11573:SF17 6 747 0.0 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 8.4E-12 T 21-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 SUPERFAMILY SSF48168 10 221 9.02E-71 T 21-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Gene3D G3DSA:3.20.70.20 610 703 9.2E-40 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Gene3D G3DSA:3.20.70.20 398 559 9.2E-40 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Gene3D G3DSA:3.20.70.20 185 344 9.2E-40 T 21-04-2016 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.1E-179 T 21-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.3E-36 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS05195 fe040b4a0c4e4dc18cba6cd7dac69641 756 Pfam PF03477 ATP cone domain 6 92 2.5E-18 T 21-04-2016 IPR005144 ATP-cone domain APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 Gene3D G3DSA:3.10.129.10 2 128 3.3E-47 T 21-04-2016 IPR029069 HotDog domain APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 6 23 - T 21-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 PANTHER PTHR31793:SF9 2 128 2.6E-46 T 21-04-2016 APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 4 119 1.2E-40 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 PANTHER PTHR31793 2 128 2.6E-46 T 21-04-2016 APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 Pfam PF03061 Thioesterase superfamily 15 95 1.3E-16 T 21-04-2016 IPR006683 Thioesterase domain APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 SUPERFAMILY SSF54637 3 128 1.82E-40 T 21-04-2016 IPR029069 HotDog domain APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 PIRSF PIRSF003230 1 129 3.6E-48 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APL_RS01540 1288a25605af5f6bc34911863feb6f3f 129 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 124 4.9E-50 T 21-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- APL_RS07185 025df724eed67cb3aa74968648658c77 483 Gene3D G3DSA:3.40.190.10 34 150 5.1E-16 T 21-04-2016 APL_RS07185 025df724eed67cb3aa74968648658c77 483 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 265 1.3E-26 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS07185 025df724eed67cb3aa74968648658c77 483 Gene3D G3DSA:1.10.530.10 286 462 1.6E-32 T 21-04-2016 APL_RS07185 025df724eed67cb3aa74968648658c77 483 PANTHER PTHR21666:SF215 272 472 1.4E-109 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APL_RS07185 025df724eed67cb3aa74968648658c77 483 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 308 336 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APL_RS07185 025df724eed67cb3aa74968648658c77 483 SUPERFAMILY SSF53850 45 266 2.59E-31 T 21-04-2016 APL_RS07185 025df724eed67cb3aa74968648658c77 483 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 474 46.131 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APL_RS07185 025df724eed67cb3aa74968648658c77 483 SMART SM00062 44 267 7.1E-29 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS07185 025df724eed67cb3aa74968648658c77 483 SUPERFAMILY SSF53955 287 462 1.43E-32 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS07185 025df724eed67cb3aa74968648658c77 483 Pfam PF01464 Transglycosylase SLT domain 300 399 1.3E-20 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 APL_RS07185 025df724eed67cb3aa74968648658c77 483 PANTHER PTHR21666 272 472 1.4E-109 T 21-04-2016 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 327 3.5E-157 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 PIRSF PIRSF004532 1 332 4.8E-130 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 Gene3D G3DSA:3.30.540.10 1 174 3.4E-61 T 21-04-2016 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 Gene3D G3DSA:3.30.540.10 175 329 1.6E-41 T 21-04-2016 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 PANTHER PTHR30447:SF0 1 331 3.3E-163 T 21-04-2016 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 SUPERFAMILY SSF56655 2 327 1.13E-105 T 21-04-2016 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 324 2.4E-129 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APL_RS03270 ab7a36797b18951b37f9dd343997cb61 332 PANTHER PTHR30447 1 331 3.3E-163 T 21-04-2016 APL_RS01755 6f88e0f3f27c6cbfb2ea28b9b01dd128 279 PANTHER PTHR30373 9 279 5.3E-47 T 21-04-2016 APL_RS01755 6f88e0f3f27c6cbfb2ea28b9b01dd128 279 PANTHER PTHR30373:SF2 9 279 5.3E-47 T 21-04-2016 APL_RS01755 6f88e0f3f27c6cbfb2ea28b9b01dd128 279 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 37 162 1.3E-37 T 21-04-2016 IPR007621 TPM domain APL_RS08645 f325c02efac0a81f2977914651e7c948 629 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 7 345 7.6E-169 T 21-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 PANTHER PTHR30181:SF2 1 603 0.0 T 21-04-2016 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 Gene3D G3DSA:3.40.50.10370 373 464 1.2E-39 T 21-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 Gene3D G3DSA:3.40.930.10 490 628 3.4E-38 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS08645 f325c02efac0a81f2977914651e7c948 629 Pfam PF02378 Phosphotransferase system, EIIC 16 275 6.7E-18 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 490 627 1.1E-31 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS08645 f325c02efac0a81f2977914651e7c948 629 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 532 548 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS08645 f325c02efac0a81f2977914651e7c948 629 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 451 3.6E-9 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 SUPERFAMILY SSF55804 490 628 3.4E-37 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 SUPERFAMILY SSF52794 373 461 4.32E-23 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS08645 f325c02efac0a81f2977914651e7c948 629 PANTHER PTHR30181 1 603 0.0 T 21-04-2016 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 Gene3D G3DSA:3.40.50.300 196 254 6.6E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 Gene3D G3DSA:3.40.50.300 47 122 6.6E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 SMART SM00491 481 610 3.5E-49 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 Gene3D G3DSA:3.40.50.300 458 605 2.8E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 Pfam PF00270 DEAD/DEAH box helicase 47 137 4.2E-4 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 Pfam PF13307 Helicase C-terminal domain 465 623 1.9E-35 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 SUPERFAMILY SSF52540 20 238 1.44E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 PANTHER PTHR11472 1 628 7.0E-214 T 21-04-2016 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 PANTHER PTHR11472:SF37 1 628 7.0E-214 T 21-04-2016 APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 SUPERFAMILY SSF52540 47 79 2.09E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04085 20711c5907fc2d847fdefc1decd288ed 640 SUPERFAMILY SSF52540 482 605 2.09E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 SUPERFAMILY SSF74653 194 287 3.53E-15 T 21-04-2016 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 PRINTS PR01374 Gram-negative bacterial tonB protein signature 229 247 7.6E-10 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 PRINTS PR01374 Gram-negative bacterial tonB protein signature 107 117 7.6E-10 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 PRINTS PR01374 Gram-negative bacterial tonB protein signature 208 229 7.6E-10 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 213 286 6.2E-19 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 215 287 2.2E-21 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 APL_RS00405 c74f8c76a83a9bc104293e35e1743cc8 288 Gene3D G3DSA:3.30.1150.10 178 288 2.9E-20 T 21-04-2016 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 PANTHER PTHR23133:SF3 2 181 6.5E-64 T 21-04-2016 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 PIRSF PIRSF004682 1 181 3.2E-71 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 SUPERFAMILY SSF56784 3 180 1.49E-48 T 21-04-2016 IPR023214 HAD-like domain APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 153 2.8E-40 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 153 9.8E-39 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 Pfam PF13242 HAD-hyrolase-like 106 176 2.4E-14 T 21-04-2016 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 PANTHER PTHR23133 2 181 6.5E-64 T 21-04-2016 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 178 2.3E-86 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APL_RS04425 4dadfcd893ae1243a1158681eff0a75b 181 Gene3D G3DSA:3.40.50.1000 2 180 1.0E-63 T 21-04-2016 IPR023214 HAD-like domain APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 SUPERFAMILY SSF55194 2 183 4.32E-72 T 21-04-2016 IPR023584 Ribosome recycling factor domain APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.117 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 PANTHER PTHR20982 1 185 6.9E-83 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 8.8E-82 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-64 T 21-04-2016 IPR023584 Ribosome recycling factor domain APL_RS02995 e8590eff5b83bcf8959382cf33bbf1a3 185 Gene3D G3DSA:1.10.132.20 67 184 8.4E-46 T 21-04-2016 IPR023584 Ribosome recycling factor domain APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 PANTHER PTHR30053 1 188 4.2E-91 T 21-04-2016 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Gene3D G3DSA:2.30.30.30 4 65 1.3E-26 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 SUPERFAMILY SSF50249 130 187 9.25E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 SUPERFAMILY SSF50249 69 128 7.71E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.9E-20 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.182 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 SUPERFAMILY SSF50104 2 63 1.91E-19 T 21-04-2016 IPR008991 Translation protein SH3-like domain APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Gene3D G3DSA:2.40.50.140 130 187 2.5E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 21-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.9E-23 T 21-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 SMART SM01185 69 123 3.9E-22 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.8E-26 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 SMART SM00841 131 186 2.4E-33 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 PIRSF PIRSF005901 2 188 2.9E-64 T 21-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 Gene3D G3DSA:2.40.50.140 66 129 1.7E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03540 8c88b5045ec1a56dceb74df5a828c06e 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.2E-76 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 SUPERFAMILY SSF101322 1 209 1.05E-76 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 Gene3D G3DSA:1.10.3890.10 1 210 1.6E-78 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 Pfam PF04356 Protein of unknown function (DUF489) 7 200 4.2E-72 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 199 4.0E-88 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 208 33.994 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 PANTHER PTHR38100 2 210 7.1E-75 T 21-04-2016 APL_RS04325 d79b84d1cd9296c816eb5d446f4b1e77 210 PANTHER PTHR38100:SF1 2 210 7.1E-75 T 21-04-2016 APL_RS05385 3e82eabc00a64c4271dc75ddef833aeb 321 Pfam PF04230 Polysaccharide pyruvyl transferase 35 292 1.7E-20 T 21-04-2016 IPR007345 Polysaccharide pyruvyl transferase APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00369 Flavodoxin signature 147 157 7.5E-11 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00369 Flavodoxin signature 171 190 7.5E-11 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00369 Flavodoxin signature 115 126 7.5E-11 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00369 Flavodoxin signature 67 80 7.5E-11 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Gene3D G3DSA:1.20.990.10 285 387 8.6E-37 T 21-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PANTHER PTHR19384 52 603 3.3E-203 T 21-04-2016 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Gene3D G3DSA:3.40.50.80 459 602 1.1E-59 T 21-04-2016 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Pfam PF00667 FAD binding domain 236 428 1.5E-28 T 21-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Gene3D G3DSA:2.40.30.10 232 284 1.3E-37 T 21-04-2016 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Gene3D G3DSA:2.40.30.10 388 458 1.3E-37 T 21-04-2016 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 16 603 4.9E-259 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PANTHER PTHR19384:SF76 52 603 3.3E-203 T 21-04-2016 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PIRSF PIRSF000207 2 603 7.4E-246 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 SUPERFAMILY SSF63380 233 449 6.54E-63 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 SUPERFAMILY SSF52218 64 209 1.41E-43 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Pfam PF00258 Flavodoxin 68 193 2.8E-30 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 485 494 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 552 560 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 284 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 460 479 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 529 545 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 390 397 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 423 432 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 509 1.5E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Pfam PF00175 Oxidoreductase NAD-binding domain 461 567 7.6E-21 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 Gene3D G3DSA:3.40.50.360 54 209 2.3E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS09820 280fe82f6965b7a851218a8d8e94c13c 603 SUPERFAMILY SSF52343 448 603 3.8E-52 T 21-04-2016 APL_RS02530 cc785432d8c8c39c153f250eeb9e3415 169 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 68 1.7E-5 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APL_RS02530 cc785432d8c8c39c153f250eeb9e3415 169 Gene3D G3DSA:1.10.287.1080 1 66 6.4E-9 T 21-04-2016 APL_RS02530 cc785432d8c8c39c153f250eeb9e3415 169 SUPERFAMILY SSF101386 1 68 1.47E-10 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 PANTHER PTHR24960:SF46 11 171 6.8E-36 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 Gene3D G3DSA:3.30.70.20 84 125 1.3E-7 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 PANTHER PTHR24960 11 171 6.8E-36 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 Pfam PF12838 4Fe-4S dicluster domain 121 168 9.1E-9 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 Pfam PF13187 4Fe-4S dicluster domain 49 95 1.6E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 Gene3D G3DSA:3.30.70.20 48 83 8.3E-9 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 11 169 3.7E-43 T 21-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 Gene3D G3DSA:3.30.70.20 126 173 7.0E-10 T 21-04-2016 APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07560 70396b725809bcf0e20b4cb6a43b1907 176 SUPERFAMILY SSF54862 46 171 2.09E-20 T 21-04-2016 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-8 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.682 T 21-04-2016 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 21-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APL_RS08775 7f60a27867b6f13ea94a076643145689 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-5 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-5 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-5 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 9.0E-31 T 21-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 SUPERFAMILY SSF81333 3 78 9.15E-18 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APL_RS08775 7f60a27867b6f13ea94a076643145689 84 Gene3D G3DSA:1.20.20.10 2 78 1.6E-30 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05860 haemagglutination activity domain 77 210 1.9E-31 T 21-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 109 206 5.8E-21 T 21-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1444 1480 0.35 T 21-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 754 782 0.78 T 21-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 605 636 3.3E-5 T 21-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 696 729 1.1 T 21-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 561 595 0.001 T 21-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 SMART SM00912 91 211 8.5E-51 T 21-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 592 639 9.3E-4 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 1517 1550 29.0 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 259 350 8.1E-5 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 1413 1477 27.0 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 750 780 5.0 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF05594 Haemagluttinin repeat 694 728 1.9 T 21-04-2016 IPR008619 Filamentous haemagglutinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 PANTHER PTHR32093 1 219 3.1E-61 T 21-04-2016 APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF13332 Haemagluttinin repeat 1886 2054 5.0E-42 T 21-04-2016 IPR025157 Haemagluttinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF13332 Haemagluttinin repeat 1644 1791 3.7E-7 T 21-04-2016 IPR025157 Haemagluttinin repeat APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Gene3D G3DSA:2.160.20.10 79 379 8.2E-100 T 21-04-2016 IPR012334 Pectin lyase fold APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.5E-10 T 21-04-2016 IPR024973 ESPR domain APL_RS05030 3ec959742cc3370aff2dbd7313c15efc 2596 SUPERFAMILY SSF51126 82 353 8.47E-63 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 Gene3D G3DSA:4.10.910.10 72 118 2.2E-25 T 21-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 PANTHER PTHR10871 2 118 1.1E-64 T 21-04-2016 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 SUPERFAMILY SSF46946 2 114 3.24E-45 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.726 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 21-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 9.7E-53 T 21-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.3E-31 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 PIRSF PIRSF002134 1 118 1.3E-41 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09470 3e2dcbad3470eca0261621878502f0dd 118 Gene3D G3DSA:1.10.8.50 2 71 7.9E-29 T 21-04-2016 APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 425 432 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 296 303 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PRINTS PR00107 Phosphocarrier protein signature 468 485 1.6E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PRINTS PR00107 Phosphocarrier protein signature 296 312 1.6E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PRINTS PR00107 Phosphocarrier protein signature 453 468 1.6E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 416 496 1.5E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 288 367 3.6E-21 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 3.1E-28 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 454 469 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Gene3D G3DSA:3.40.930.10 4 141 1.7E-37 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PANTHER PTHR30181 2 502 7.2E-172 T 21-04-2016 APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 SUPERFAMILY SSF55804 4 141 3.53E-36 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Pfam PF00381 PTS HPr component phosphorylation site 415 496 1.4E-21 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Pfam PF00381 PTS HPr component phosphorylation site 288 367 5.9E-22 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 SUPERFAMILY SSF55594 288 373 1.44E-21 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Gene3D G3DSA:3.30.1340.10 288 373 1.9E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 Gene3D G3DSA:3.30.1340.10 415 502 4.3E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 SUPERFAMILY SSF55804 148 264 9.07E-7 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PANTHER PTHR30181:SF3 2 502 7.2E-172 T 21-04-2016 APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 SUPERFAMILY SSF55594 415 502 2.49E-22 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS01780 e08423a3f0aa57adbf1ac6031d06a9c2 502 PIRSF PIRSF000690 1 502 2.5E-194 T 21-04-2016 IPR016258 Multiphosphoryl transfer protein FruB KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS00830 fc507504c050abdb345e4314807fd285 302 Pfam PF04381 Putative exonuclease, RdgC 2 297 1.0E-112 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 APL_RS00830 fc507504c050abdb345e4314807fd285 302 PANTHER PTHR38103:SF1 3 302 3.8E-121 T 21-04-2016 APL_RS00830 fc507504c050abdb345e4314807fd285 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 300 33.727 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 APL_RS00830 fc507504c050abdb345e4314807fd285 302 PANTHER PTHR38103 3 302 3.8E-121 T 21-04-2016 APL_RS01545 05730fa8c7a33bc708bfa420928b2656 226 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 4.5E-41 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APL_RS01545 05730fa8c7a33bc708bfa420928b2656 226 PANTHER PTHR30625 1 226 1.0E-75 T 21-04-2016 APL_RS01545 05730fa8c7a33bc708bfa420928b2656 226 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.1E-90 T 21-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 APL_RS01545 05730fa8c7a33bc708bfa420928b2656 226 PANTHER PTHR30625:SF3 1 226 1.0E-75 T 21-04-2016 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 142 7.1E-13 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site APL_RS06815 0043dff306328839d92edd8307e7d95c 707 PANTHER PTHR32552:SF27 64 707 1.1E-20 T 21-04-2016 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 Gene3D G3DSA:2.40.170.20 144 255 1.4E-69 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 Gene3D G3DSA:2.40.170.20 293 707 1.4E-69 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 PANTHER PTHR32552 64 707 1.1E-20 T 21-04-2016 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 SUPERFAMILY SSF56935 45 263 9.53E-82 T 21-04-2016 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 SUPERFAMILY SSF56935 314 707 9.53E-82 T 21-04-2016 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 Gene3D G3DSA:2.170.130.10 41 143 4.1E-16 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS06815 0043dff306328839d92edd8307e7d95c 707 Pfam PF00593 TonB dependent receptor 463 706 1.7E-27 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 PANTHER PTHR30217 257 463 3.0E-237 T 21-04-2016 APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 PANTHER PTHR30217 2 211 3.0E-237 T 21-04-2016 APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 Pfam PF16325 Peptidase family U32 C-terminal domain 370 452 6.6E-18 T 21-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 Pfam PF01136 Peptidase family U32 80 354 5.5E-96 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 PANTHER PTHR30217:SF6 257 463 3.0E-237 T 21-04-2016 APL_RS05890 f1cad4d0697d7a4510a5cbd07386d055 465 PANTHER PTHR30217:SF6 2 211 3.0E-237 T 21-04-2016 APL_RS08715 abbb4a1c125a3bb168373b53f368c60c 89 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 87 3.4E-14 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APL_RS08715 abbb4a1c125a3bb168373b53f368c60c 89 Pfam PF04077 DsrH like protein 9 83 1.6E-14 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APL_RS08715 abbb4a1c125a3bb168373b53f368c60c 89 SUPERFAMILY SSF75169 1 88 1.61E-19 T 21-04-2016 IPR027396 DsrEFH-like APL_RS08715 abbb4a1c125a3bb168373b53f368c60c 89 Gene3D G3DSA:3.40.1260.10 1 87 3.7E-17 T 21-04-2016 IPR027396 DsrEFH-like APL_RS02470 19f9867091cc107cfef04a32426c803a 447 Gene3D G3DSA:3.50.50.60 309 378 2.7E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 Gene3D G3DSA:3.50.50.60 48 160 2.7E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 SUPERFAMILY SSF51905 174 302 5.19E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 48 166 1.8E-7 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 PANTHER PTHR10632 48 445 1.5E-123 T 21-04-2016 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 SUPERFAMILY SSF51905 47 189 4.43E-23 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS02470 19f9867091cc107cfef04a32426c803a 447 PANTHER PTHR10632:SF2 48 445 1.5E-123 T 21-04-2016 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Gene3D G3DSA:1.10.287.180 3 76 2.0E-23 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 PANTHER PTHR30437:SF6 2 162 1.7E-93 T 21-04-2016 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 SUPERFAMILY SSF54534 81 156 3.4E-21 T 21-04-2016 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 PANTHER PTHR30437 2 162 1.7E-93 T 21-04-2016 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 SUPERFAMILY SSF46557 4 79 6.8E-26 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Gene3D G3DSA:3.10.50.30 77 156 1.3E-28 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.913 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.391 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 2.7E-72 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 6.8E-25 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 7.6E-24 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APL_RS01985 6d966777aa9d2005d8bbccfe1aded86c 162 PIRSF PIRSF006092 1 158 6.6E-51 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 Gene3D G3DSA:3.40.50.20 9 74 1.8E-18 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 SUPERFAMILY SSF52440 8 80 1.87E-13 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 PANTHER PTHR11609 10 337 7.7E-104 T 21-04-2016 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 SUPERFAMILY SSF56059 84 281 6.36E-55 T 21-04-2016 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 Pfam PF02222 ATP-grasp domain 93 261 1.3E-55 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 SUPERFAMILY SSF51246 285 361 9.42E-21 T 21-04-2016 IPR011054 Rudiment single hybrid motif APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 PANTHER PTHR11609:SF5 10 337 7.7E-104 T 21-04-2016 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 337 5.7E-112 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 Gene3D G3DSA:3.30.470.20 124 358 4.4E-79 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS03455 af63e8e6cb0fade396377f58fcc6eb6b 362 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 332 32.194 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APL_RS01550 c3dab9241ad2cffedf718df4ff925dae 146 PANTHER PTHR30558 1 144 2.4E-50 T 21-04-2016 APL_RS01550 c3dab9241ad2cffedf718df4ff925dae 146 PANTHER PTHR30558:SF7 1 144 2.4E-50 T 21-04-2016 APL_RS01550 c3dab9241ad2cffedf718df4ff925dae 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 144 1.1E-18 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.8E-74 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 511 2.1E-35 T 21-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 SMART SM01003 4 137 1.7E-70 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 21-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 512 6.7E-294 T 21-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.4E-48 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 SUPERFAMILY SSF52283 1 168 6.04E-54 T 21-04-2016 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Gene3D G3DSA:3.50.50.60 174 193 1.1E-5 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 SUPERFAMILY SSF51735 138 313 8.23E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 PIRSF PIRSF000203 1 511 3.5E-277 T 21-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Gene3D G3DSA:3.40.50.1770 194 371 8.6E-46 T 21-04-2016 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 21-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 Gene3D G3DSA:3.40.50.1770 1 173 3.4E-66 T 21-04-2016 APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 SMART SM01002 146 311 3.1E-81 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APL_RS04410 6b2315c71a1d9d1d0e3411ccdccfe949 512 PANTHER PTHR10160 1 511 5.9E-302 T 21-04-2016 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 PANTHER PTHR10357:SF74 1 620 5.8E-245 T 21-04-2016 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 SUPERFAMILY SSF51445 489 562 5.1E-122 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 SUPERFAMILY SSF51445 129 460 5.1E-122 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 PANTHER PTHR10357 1 620 5.8E-245 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 SUPERFAMILY SSF51011 571 633 1.15E-8 T 21-04-2016 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 Gene3D G3DSA:3.20.20.80 148 562 2.2E-105 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 SMART SM00642 154 555 1.6E-7 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 Gene3D G3DSA:2.60.40.1180 571 626 1.5E-7 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 SUPERFAMILY SSF81296 6 143 8.6E-36 T 21-04-2016 IPR014756 Immunoglobulin E-set APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 653 1.1E-256 T 21-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 Gene3D G3DSA:2.60.40.10 6 147 1.5E-44 T 21-04-2016 IPR013783 Immunoglobulin-like fold APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 94 5.9E-17 T 21-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APL_RS01790 889d1a6a1427f330aba04b495e950f14 661 Pfam PF00128 Alpha amylase, catalytic domain 184 519 4.5E-12 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 Gene3D G3DSA:1.10.3470.10 17 131 3.3E-26 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 Pfam PF01032 FecCD transport family 136 290 2.3E-43 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 Pfam PF01032 FecCD transport family 32 130 8.2E-22 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 PANTHER PTHR30472:SF25 18 293 4.0E-89 T 21-04-2016 APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 Gene3D G3DSA:1.10.3470.10 137 292 2.9E-51 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 PANTHER PTHR30472 18 293 4.0E-89 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS09525 7ac3affecb961a9b8d213d45e81ab577 293 SUPERFAMILY SSF81345 14 290 5.23E-62 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 178 9.1E-41 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 SMART SM00864 13 210 4.0E-108 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 SUPERFAMILY SSF52490 13 213 3.14E-67 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 SMART SM00865 212 330 1.2E-51 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 Pfam PF12327 FtsZ family, C-terminal domain 227 321 3.2E-33 T 21-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PRINTS PR00423 Cell division protein FtsZ signature 194 216 7.5E-51 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PRINTS PR00423 Cell division protein FtsZ signature 103 123 7.5E-51 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PRINTS PR00423 Cell division protein FtsZ signature 131 152 7.5E-51 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PRINTS PR00423 Cell division protein FtsZ signature 217 238 7.5E-51 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 Gene3D G3DSA:3.30.1330.20 220 324 5.1E-45 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 Gene3D G3DSA:3.40.50.1440 14 219 5.4E-92 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 SUPERFAMILY SSF55307 209 323 8.7E-40 T 21-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 364 37.045 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 339 3.2E-133 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PANTHER PTHR30314 1 401 2.6E-186 T 21-04-2016 APL_RS00115 a10ae51b73f0db1442e13568ae987b8a 403 PANTHER PTHR30314:SF3 1 401 2.6E-186 T 21-04-2016 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 35 746 1.6E-202 T 21-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 SUPERFAMILY SSF52540 230 441 3.55E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 Gene3D G3DSA:3.40.50.300 273 443 1.6E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 750 1038 7.0E-72 T 21-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 PANTHER PTHR30195:SF16 44 942 3.2E-122 T 21-04-2016 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 847 879 4.0E-4 T 21-04-2016 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 SMART SM00487 269 479 1.5E-12 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 PANTHER PTHR30195 44 942 3.2E-122 T 21-04-2016 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 30 220 5.4E-50 T 21-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APL_RS01505 bfa7420bcd009c8ab9d76c4d35643e14 1045 Pfam PF04851 Type III restriction enzyme, res subunit 273 440 2.9E-36 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 SUPERFAMILY SSF52402 22 241 4.19E-54 T 21-04-2016 APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 PANTHER PTHR11807 14 294 1.9E-127 T 21-04-2016 APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 Pfam PF01171 PP-loop family 46 210 4.4E-15 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 PIRSF PIRSF004976 2 279 2.0E-74 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 PANTHER PTHR11807:SF16 14 294 1.9E-127 T 21-04-2016 APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 Gene3D G3DSA:3.40.50.620 28 211 2.1E-20 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS05110 5152cc019d29d4fdc25009286b3975e5 318 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 11 276 57.047 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 SUPERFAMILY SSF52540 78 90 5.34E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 SUPERFAMILY SSF52540 120 296 5.34E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 Gene3D G3DSA:3.40.50.300 121 323 3.1E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 PANTHER PTHR30473:SF1 6 347 3.2E-178 T 21-04-2016 APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 PANTHER PTHR30473 6 347 3.2E-178 T 21-04-2016 APL_RS01675 960b677104c9f7906163cc0ea3186d62 356 Pfam PF02562 PhoH-like protein 121 324 7.0E-93 T 21-04-2016 IPR003714 PhoH-like protein GO:0005524 APL_RS02035 7f8c0b14f22776805c4b454252d6336b 142 PIRSF PIRSF004923 1 142 1.3E-42 T 21-04-2016 IPR026268 Protein RseC APL_RS02035 7f8c0b14f22776805c4b454252d6336b 142 PANTHER PTHR35867 2 142 7.8E-30 T 21-04-2016 APL_RS02035 7f8c0b14f22776805c4b454252d6336b 142 PANTHER PTHR35867:SF1 2 142 7.8E-30 T 21-04-2016 APL_RS02035 7f8c0b14f22776805c4b454252d6336b 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 140 1.6E-32 T 21-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 PANTHER PTHR30562 5 607 1.3E-284 T 21-04-2016 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Pfam PF02151 UvrB/uvrC motif 202 235 1.7E-9 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SMART SM00465 14 95 1.6E-24 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 606 28.746 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SUPERFAMILY SSF46600 188 240 1.23E-13 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Gene3D G3DSA:4.10.860.10 181 240 4.8E-19 T 21-04-2016 IPR001943 UVR domain GO:0005515 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Gene3D G3DSA:3.40.1440.10 15 94 1.0E-11 T 21-04-2016 IPR027299 GIY-YIG domain APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 541 2.0E-43 T 21-04-2016 IPR001162 UvrC family homology region APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SUPERFAMILY SSF47781 516 608 1.94E-19 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 588 5.2E-221 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SUPERFAMILY SSF82771 14 97 2.48E-24 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SMART SM00278 555 574 130.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 SMART SM00278 587 606 0.84 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 PANTHER PTHR30562:SF1 5 607 1.3E-284 T 21-04-2016 APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Pfam PF01541 GIY-YIG catalytic domain 16 90 3.6E-12 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily APL_RS01435 7ffeea8cd26517dfa41080175c8df23d 610 Gene3D G3DSA:1.10.150.20 555 608 1.9E-19 T 21-04-2016 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.01 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 PANTHER PTHR10986 2 117 2.7E-67 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 Gene3D G3DSA:1.10.1900.20 55 117 4.7E-31 T 21-04-2016 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 Pfam PF00453 Ribosomal protein L20 3 109 7.8E-49 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 SUPERFAMILY SSF74731 3 116 4.19E-50 T 21-04-2016 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 21-04-2016 APL_RS01150 5f96a4a191b55abae99992e41d1856bb 117 PANTHER PTHR10986:SF12 2 117 2.7E-67 T 21-04-2016 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 42.391 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 SUPERFAMILY SSF53633 4 236 1.19E-70 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 Pfam PF00696 Amino acid kinase family 7 216 8.5E-27 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 Gene3D G3DSA:3.40.1160.10 2 236 5.3E-82 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 PIRSF PIRSF005650 1 237 2.2E-87 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 PANTHER PTHR21499 3 237 8.2E-106 T 21-04-2016 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 PANTHER PTHR21499:SF23 3 237 8.2E-106 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APL_RS02990 4ae3ce2092419141fd627e05e845bde1 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.1E-103 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 450 42.931 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 PANTHER PTHR22572:SF115 5 447 1.7E-233 T 21-04-2016 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 2.9E-8 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 4.1E-6 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS03085 e274094457fba9103c93934e7575fa3f 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 401 429 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 453 2.9E-204 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 SUPERFAMILY SSF51161 218 452 6.38E-55 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS03085 e274094457fba9103c93934e7575fa3f 457 PANTHER PTHR22572 5 447 1.7E-233 T 21-04-2016 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Gene3D G3DSA:2.160.10.10 243 321 1.2E-20 T 21-04-2016 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 SUPERFAMILY SSF53448 4 250 2.72E-67 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Gene3D G3DSA:3.90.550.10 2 242 5.2E-73 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Gene3D G3DSA:2.160.10.10 322 453 4.0E-37 T 21-04-2016 APL_RS03085 e274094457fba9103c93934e7575fa3f 457 Pfam PF12804 MobA-like NTP transferase domain 6 126 5.6E-22 T 21-04-2016 IPR025877 MobA-like NTP transferase APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 SUPERFAMILY SSF56042 170 340 4.64E-63 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 163 1.0E-15 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 Gene3D G3DSA:3.30.1330.10 21 169 7.1E-64 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 340 4.2E-38 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 Gene3D G3DSA:3.90.650.10 171 342 1.4E-67 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 PANTHER PTHR10520 6 344 1.1E-222 T 21-04-2016 APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 344 47.163 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 SUPERFAMILY SSF55326 6 169 1.79E-53 T 21-04-2016 APL_RS05710 e721b260dc4f1bfcecd22957fc44d46d 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 334 3.7E-152 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 PANTHER PTHR22789:SF8 1 237 1.8E-135 T 21-04-2016 APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 PANTHER PTHR22789 1 237 1.8E-135 T 21-04-2016 APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 Gene3D G3DSA:3.40.225.10 11 237 3.6E-70 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 202 6.8E-46 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 SMART SM01007 14 204 2.4E-68 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS09040 b94a5e3e444ea390f190685fadb47f73 237 SUPERFAMILY SSF53639 11 229 1.71E-69 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 434 34.009 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Pfam PF08245 Mur ligase middle domain 111 278 1.3E-24 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Gene3D G3DSA:3.40.1190.10 95 296 1.1E-56 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 365 9.7E-8 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Gene3D G3DSA:3.40.50.720 5 93 5.0E-23 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 SUPERFAMILY SSF51984 4 95 1.11E-20 T 21-04-2016 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 432 4.9E-131 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 PANTHER PTHR23135 1 434 3.7E-154 T 21-04-2016 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 SUPERFAMILY SSF53623 96 293 1.18E-51 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 Gene3D G3DSA:3.90.190.20 299 430 1.1E-43 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 SUPERFAMILY SSF53244 297 433 1.69E-45 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS00080 cd62e38009fe691ccb04c38783c93384 436 PANTHER PTHR23135:SF2 1 434 3.7E-154 T 21-04-2016 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 Gene3D G3DSA:3.30.830.10 320 440 2.2E-5 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 SUPERFAMILY SSF63411 247 445 2.93E-8 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 PANTHER PTHR11851:SF144 1 445 8.1E-42 T 21-04-2016 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 SUPERFAMILY SSF63411 16 243 3.14E-38 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 Pfam PF05193 Peptidase M16 inactive domain 194 374 3.7E-15 T 21-04-2016 IPR007863 Peptidase M16, C-terminal APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 Pfam PF00675 Insulinase (Peptidase family M16) 43 161 1.9E-11 T 21-04-2016 IPR011765 Peptidase M16, N-terminal APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 PANTHER PTHR11851 1 445 8.1E-42 T 21-04-2016 APL_RS06040 478fdf883c593f58b87906c7cce5e858 504 Gene3D G3DSA:3.30.830.10 19 246 5.2E-41 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.656 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 SUPERFAMILY SSF117782 1 105 8.5E-38 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 PANTHER PTHR34068:SF1 1 106 1.6E-39 T 21-04-2016 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 PANTHER PTHR34068 1 106 1.6E-39 T 21-04-2016 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 Pfam PF01906 Putative heavy-metal-binding 1 105 4.0E-40 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 APL_RS02390 5eaea16944a36acfc13d3043d8edcead 106 Gene3D G3DSA:3.30.110.70 1 105 3.1E-38 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 SMART SM00382 28 207 0.0052 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 SUPERFAMILY SSF52540 3 207 1.33E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 Pfam PF00005 ABC transporter 20 166 1.3E-23 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 PANTHER PTHR24220:SF70 5 207 1.1E-53 T 21-04-2016 APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 Gene3D G3DSA:3.40.50.300 2 207 9.8E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08595 e8a289395127d10a3ada314a9585b47a 209 PANTHER PTHR24220 5 207 1.1E-53 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 SUPERFAMILY SSF56801 7 291 6.93E-112 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 SUPERFAMILY SSF56801 331 590 6.93E-112 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 Pfam PF00501 AMP-binding enzyme 14 461 1.6E-100 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 21-04-2016 IPR020845 AMP-binding, conserved site APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 Gene3D G3DSA:3.40.50.980 328 391 7.0E-34 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 Gene3D G3DSA:3.40.50.980 194 286 7.0E-34 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 Gene3D G3DSA:2.30.38.10 397 455 3.1E-18 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 PANTHER PTHR24096:SF193 1 591 8.5E-219 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 Gene3D G3DSA:3.40.50.980 9 193 3.7E-31 T 21-04-2016 APL_RS07470 62b1d33bae3e2c648e92c51f11df7ab8 591 PANTHER PTHR24096 1 591 8.5E-219 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 19 166 1.5E-42 T 21-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 APL_RS08910 64583794276da332888d25ff7b79907e 169 Gene3D G3DSA:3.30.70.20 64 98 4.4E-13 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 Gene3D G3DSA:3.30.70.20 135 168 1.1E-6 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 PANTHER PTHR30176 27 169 3.6E-12 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 Pfam PF12800 4Fe-4S binding domain 128 138 0.84 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS08910 64583794276da332888d25ff7b79907e 169 Pfam PF13187 4Fe-4S dicluster domain 55 101 6.9E-10 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS08910 64583794276da332888d25ff7b79907e 169 Pfam PF00037 4Fe-4S binding domain 145 165 4.6E-5 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS08910 64583794276da332888d25ff7b79907e 169 SUPERFAMILY SSF54862 37 169 6.8E-24 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 PANTHER PTHR30176:SF3 27 169 3.6E-12 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS08910 64583794276da332888d25ff7b79907e 169 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS08910 64583794276da332888d25ff7b79907e 169 Gene3D G3DSA:3.30.70.20 99 134 3.3E-7 T 21-04-2016 APL_RS08910 64583794276da332888d25ff7b79907e 169 Gene3D G3DSA:1.10.1060.10 35 63 2.6E-5 T 21-04-2016 APL_RS08105 77b9f28b5b90430dc92d3136ee57fccc 354 Gene3D G3DSA:1.20.1250.20 7 176 1.4E-18 T 21-04-2016 APL_RS08105 77b9f28b5b90430dc92d3136ee57fccc 354 Pfam PF07690 Major Facilitator Superfamily 13 343 1.3E-13 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS08105 77b9f28b5b90430dc92d3136ee57fccc 354 SUPERFAMILY SSF103473 7 351 6.41E-21 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 Gene3D G3DSA:4.10.520.10 1 90 5.9E-39 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 PANTHER PTHR33175 1 90 7.7E-51 T 21-04-2016 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 SMART SM00411 1 90 1.1E-46 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 SUPERFAMILY SSF47729 1 90 1.77E-34 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 PANTHER PTHR33175:SF4 1 90 7.7E-51 T 21-04-2016 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APL_RS00595 49c8a0ef5a1f5785b56ff745c8d136ba 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.6E-35 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 PANTHER PTHR30173 1 185 3.9E-49 T 21-04-2016 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 Pfam PF04542 Sigma-70 region 2 25 91 8.9E-16 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 181 4.5E-29 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 SUPERFAMILY SSF88946 6 105 4.71E-30 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 Pfam PF08281 Sigma-70, region 4 133 180 2.6E-17 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 Gene3D G3DSA:1.10.10.10 122 186 8.6E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 SUPERFAMILY SSF88659 122 182 5.05E-17 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 189 1.9E-89 T 21-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS02025 b5f3ddaccdc764b057d6469b1b4b3b12 192 Gene3D G3DSA:1.10.1740.10 6 106 6.5E-35 T 21-04-2016 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 190 1.7E-12 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PANTHER PTHR18901 1 220 1.2E-62 T 21-04-2016 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 190 1.5E-37 T 21-04-2016 IPR023214 HAD-like domain APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 Gene3D G3DSA:3.40.50.1000 83 220 4.6E-42 T 21-04-2016 IPR023214 HAD-like domain APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 185 7.3E-11 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 189 1.2E-12 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 SUPERFAMILY SSF56784 4 220 1.08E-58 T 21-04-2016 IPR023214 HAD-like domain APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 2.9E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.9E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.9E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.9E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 215 2.5E-66 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 PANTHER PTHR18901:SF14 1 220 1.2E-62 T 21-04-2016 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 Gene3D G3DSA:1.10.150.240 20 82 3.7E-18 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APL_RS10060 9bd44225fbc6fdbb246c730313aa642c 221 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 5 221 32.901 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PANTHER PTHR20854:SF5 1 249 1.4E-69 T 21-04-2016 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 Gene3D G3DSA:3.40.190.80 158 258 8.1E-29 T 21-04-2016 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PANTHER PTHR20854 1 249 1.4E-69 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 SUPERFAMILY SSF56655 7 267 9.29E-70 T 21-04-2016 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 255 6.8E-87 T 21-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 1.6E-13 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.6E-13 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.6E-13 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 151 174 1.6E-13 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.6E-13 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 Gene3D G3DSA:3.30.540.10 7 143 9.1E-42 T 21-04-2016 APL_RS06880 6bf7b36f5fcbf200a4d706df17f56bae 271 Pfam PF00459 Inositol monophosphatase family 6 248 1.8E-48 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 Gene3D G3DSA:3.40.50.150 56 246 6.6E-72 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 SUPERFAMILY SSF53335 2 245 5.13E-72 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 Pfam PF04445 Putative SAM-dependent methyltransferase 18 245 1.2E-105 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 PANTHER PTHR36112 3 251 7.0E-127 T 21-04-2016 APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 247 37.439 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 Gene3D G3DSA:3.40.1630.10 1 54 1.8E-26 T 21-04-2016 APL_RS09955 6efe0c8558af744e23c43f9a7cc0a717 251 PANTHER PTHR36112:SF1 3 251 7.0E-127 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 232 243 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 SUPERFAMILY SSF54862 102 149 7.85E-22 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 SUPERFAMILY SSF54862 197 291 7.85E-22 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 PANTHER PTHR30176:SF2 9 293 4.3E-76 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 Pfam PF12801 4Fe-4S binding domain 89 134 5.6E-13 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 Pfam PF12801 4Fe-4S binding domain 183 219 9.4E-5 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 Gene3D G3DSA:3.30.70.20 197 289 2.2E-15 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 Gene3D G3DSA:3.30.70.20 111 116 2.2E-15 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 30 284 4.6E-114 T 21-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 PANTHER PTHR30176 9 293 4.3E-76 T 21-04-2016 APL_RS07540 9e9ae2827330a62e8ac23a1c3b843319 297 Pfam PF12838 4Fe-4S dicluster domain 231 281 2.8E-6 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS05375 f62ae5df2722832746286ff6593b1ddd 256 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 185 2.2E-39 T 21-04-2016 IPR002654 Glycosyl transferase, family 25 APL_RS05375 f62ae5df2722832746286ff6593b1ddd 256 PANTHER PTHR10730:SF27 4 248 6.7E-18 T 21-04-2016 APL_RS05375 f62ae5df2722832746286ff6593b1ddd 256 PANTHER PTHR10730 4 248 6.7E-18 T 21-04-2016 APL_RS05115 edbcfd4ba1ba237c194cfe54eaff5d40 458 PANTHER PTHR37821 2 458 6.0E-165 T 21-04-2016 APL_RS05115 edbcfd4ba1ba237c194cfe54eaff5d40 458 Pfam PF03553 Na+/H+ antiporter family 162 452 7.3E-71 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APL_RS05115 edbcfd4ba1ba237c194cfe54eaff5d40 458 Pfam PF13726 Na+-H+ antiporter family 4 97 6.8E-26 T 21-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal APL_RS02100 7385c908cc199a675663be97027a384d 341 Gene3D G3DSA:2.160.10.10 101 142 6.0E-13 T 21-04-2016 APL_RS02100 7385c908cc199a675663be97027a384d 341 SUPERFAMILY SSF51161 32 318 1.36E-82 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS02100 7385c908cc199a675663be97027a384d 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 331 1.2E-116 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APL_RS02100 7385c908cc199a675663be97027a384d 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 328 34.745 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APL_RS02100 7385c908cc199a675663be97027a384d 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS02100 7385c908cc199a675663be97027a384d 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 227 255 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS02100 7385c908cc199a675663be97027a384d 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 146 8.0E-10 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02100 7385c908cc199a675663be97027a384d 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 256 1.3E-4 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02100 7385c908cc199a675663be97027a384d 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 181 3.4E-8 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02100 7385c908cc199a675663be97027a384d 341 Gene3D G3DSA:2.160.10.10 143 311 1.1E-40 T 21-04-2016 APL_RS02100 7385c908cc199a675663be97027a384d 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 90 1.5E-23 T 21-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APL_RS02100 7385c908cc199a675663be97027a384d 341 PANTHER PTHR22572 102 297 2.8E-54 T 21-04-2016 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 Pfam PF00027 Cyclic nucleotide-binding domain 38 123 5.4E-20 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 ProSitePatterns PS00042 Crp-type HTH domain signature. 184 207 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 45 61 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 SMART SM00419 176 224 3.4E-17 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 3.0E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 3.0E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 86 105 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 SMART SM00100 13 138 3.1E-22 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 SUPERFAMILY SSF46785 155 223 2.24E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 SUPERFAMILY SSF51206 25 153 2.75E-32 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 Gene3D G3DSA:2.60.120.10 21 159 1.1E-37 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 PANTHER PTHR24567:SF27 1 223 7.7E-130 T 21-04-2016 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 PANTHER PTHR24567 1 223 7.7E-130 T 21-04-2016 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 Pfam PF00325 Bacterial regulatory proteins, crp family 182 213 2.3E-15 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS10410 c86b7ba7c48d3dd448c8c76e256ea386 226 Gene3D G3DSA:1.10.10.10 160 223 7.8E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PANTHER PTHR22594 200 466 5.9E-249 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PANTHER PTHR22594 6 181 5.9E-249 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 Gene3D G3DSA:3.30.930.10 110 463 1.2E-112 T 21-04-2016 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 SUPERFAMILY SSF55681 99 465 2.7E-97 T 21-04-2016 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PANTHER PTHR22594:SF6 200 466 5.9E-249 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PANTHER PTHR22594:SF6 6 181 5.9E-249 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 Pfam PF01336 OB-fold nucleic acid binding domain 21 100 2.6E-9 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 467 7.6E-210 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 467 46.474 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 SUPERFAMILY SSF50249 16 103 1.18E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 422 436 2.3E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 382 398 2.3E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 221 2.3E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 238 2.3E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 Gene3D G3DSA:2.40.50.140 16 105 3.0E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03525 decd512e54bc2f13c25f064cb8b40459 467 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 460 6.6E-82 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 Gene3D G3DSA:3.60.20.10 2 259 3.5E-65 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 467 1.2E-156 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 PANTHER PTHR11907:SF0 1 481 2.4E-250 T 21-04-2016 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 Pfam PF00156 Phosphoribosyl transferase domain 295 396 1.2E-7 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 PIRSF PIRSF000485 1 484 7.1E-165 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 Pfam PF13522 Glutamine amidotransferase domain 65 209 2.9E-16 T 21-04-2016 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 PANTHER PTHR11907 1 481 2.4E-250 T 21-04-2016 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 469 44.653 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 SUPERFAMILY SSF56235 2 258 1.03E-73 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 SUPERFAMILY SSF53271 251 486 2.36E-67 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02180 641ddfae979f1afcc7572e96bb3d7c3d 505 Gene3D G3DSA:3.40.50.2020 274 447 3.5E-44 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PANTHER PTHR23115:SF69 5 181 1.8E-252 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PANTHER PTHR23115:SF69 248 469 1.8E-252 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Gene3D G3DSA:3.40.50.300 6 280 2.7E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 SUPERFAMILY SSF50447 259 390 5.65E-28 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 526 0.0 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 SUPERFAMILY SSF52540 7 274 3.45E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PANTHER PTHR23115 5 181 1.8E-252 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PANTHER PTHR23115 248 469 1.8E-252 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PRINTS PR00315 GTP-binding elongation factor signature 62 70 9.1E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.1E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PRINTS PR00315 GTP-binding elongation factor signature 82 92 9.1E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 PRINTS PR00315 GTP-binding elongation factor signature 134 143 9.1E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Gene3D G3DSA:2.40.30.10 289 391 6.7E-25 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 SUPERFAMILY SSF54980 390 465 1.65E-17 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 1.5E-46 T 21-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Pfam PF03144 Elongation factor Tu domain 2 311 377 3.5E-10 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Gene3D G3DSA:3.30.70.870 392 461 9.8E-14 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 524 52.368 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 Pfam PF00009 Elongation factor Tu GTP binding domain 9 274 3.5E-46 T 21-04-2016 APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS00150 b544a4a63f94106ab73f3f9d7125c411 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 159 1.7E-18 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 Pfam PF11398 Protein of unknown function (DUF2813) 1 344 4.1E-133 T 21-04-2016 IPR022602 Protein of unknown function DUF2813 APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 PANTHER PTHR32182:SF12 1 515 5.0E-82 T 21-04-2016 APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 PANTHER PTHR32182 1 515 5.0E-82 T 21-04-2016 APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 SUPERFAMILY SSF52540 1 301 1.14E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 Gene3D G3DSA:3.40.1360.10 348 447 8.2E-4 T 21-04-2016 APL_RS00745 8f23672d24928b7eaa58e578d450f524 519 Gene3D G3DSA:3.40.50.300 1 301 1.0E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.3E-26 T 21-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 Gene3D G3DSA:2.30.170.40 2 77 2.3E-35 T 21-04-2016 APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.984 T 21-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 Pfam PF00830 Ribosomal L28 family 3 62 7.7E-25 T 21-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 SUPERFAMILY SSF143800 2 77 1.12E-29 T 21-04-2016 APL_RS10440 a6adfbbdd91ce5b71b0017857a2c1955 78 PANTHER PTHR13528 1 74 1.8E-35 T 21-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PANTHER PTHR23501:SF1 5 458 5.1E-223 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 Pfam PF07690 Major Facilitator Superfamily 14 403 5.0E-45 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PANTHER PTHR23501 5 458 5.1E-223 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 412 9.2E-76 T 21-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 SUPERFAMILY SSF103473 9 192 1.57E-59 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 SUPERFAMILY SSF103473 242 452 1.57E-59 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 352 372 3.4E-11 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 3.4E-11 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 3.4E-11 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 261 286 3.4E-11 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 3.4E-11 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 Gene3D G3DSA:1.20.1250.20 11 187 2.1E-24 T 21-04-2016 APL_RS03550 386908eca7abc455c7ae7eca4817dc71 463 Gene3D G3DSA:1.20.1250.20 259 452 3.3E-16 T 21-04-2016 APL_RS08340 053f3ae248e0a0dcd3daf1f8bc3d0c33 222 PANTHER PTHR30625 1 222 6.9E-44 T 21-04-2016 APL_RS08340 053f3ae248e0a0dcd3daf1f8bc3d0c33 222 Pfam PF01618 MotA/TolQ/ExbB proton channel family 74 204 6.4E-35 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APL_RS08340 053f3ae248e0a0dcd3daf1f8bc3d0c33 222 PANTHER PTHR30625:SF3 1 222 6.9E-44 T 21-04-2016 APL_RS04100 033b19f0e511bb3826acc5e565360636 174 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 174 2.9E-61 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APL_RS04100 033b19f0e511bb3826acc5e565360636 174 PANTHER PTHR10302 1 174 2.8E-53 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APL_RS04100 033b19f0e511bb3826acc5e565360636 174 Pfam PF00436 Single-strand binding protein family 4 108 1.3E-42 T 21-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APL_RS04100 033b19f0e511bb3826acc5e565360636 174 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.52 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APL_RS04100 033b19f0e511bb3826acc5e565360636 174 SUPERFAMILY SSF50249 3 174 3.32E-60 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04100 033b19f0e511bb3826acc5e565360636 174 Gene3D G3DSA:2.40.50.140 154 174 6.8E-58 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04100 033b19f0e511bb3826acc5e565360636 174 Gene3D G3DSA:2.40.50.140 1 122 6.8E-58 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 Gene3D G3DSA:1.10.10.10 6 78 1.6E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.2E-13 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.2E-13 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 SUPERFAMILY SSF100950 74 232 4.09E-28 T 21-04-2016 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 Pfam PF00455 DeoR C terminal sensor domain 75 230 3.6E-48 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 SMART SM01134 72 232 8.3E-66 T 21-04-2016 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 SUPERFAMILY SSF46785 6 75 4.67E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 PANTHER PTHR30363:SF1 1 251 1.1E-107 T 21-04-2016 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.6E-24 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 Gene3D G3DSA:3.30.750.70 79 128 1.2E-14 T 21-04-2016 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 PANTHER PTHR30363 1 251 1.1E-107 T 21-04-2016 APL_RS04315 b37d41ea1444462e5cc766975b814fee 253 SMART SM00420 6 58 1.9E-25 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 12 352 3.0E-155 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 Gene3D G3DSA:3.20.20.70 15 352 3.3E-149 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 PANTHER PTHR21225 12 353 2.7E-209 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 SUPERFAMILY SSF51569 12 351 6.8E-132 T 21-04-2016 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 Pfam PF00793 DAHP synthetase I family 49 344 5.7E-99 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS00950 b2903a3390dffc15de5374251eab512c 353 PIRSF PIRSF001361 1 353 6.0E-158 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 487 59.824 T 21-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 49 485 3.9E-254 T 21-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 Pfam PF02335 Cytochrome c552 54 482 2.0E-182 T 21-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 PANTHER PTHR30633 49 489 2.2E-136 T 21-04-2016 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 PIRSF PIRSF000243 2 490 3.7E-130 T 21-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 Gene3D G3DSA:1.20.140.10 323 455 5.4E-53 T 21-04-2016 APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 SUPERFAMILY SSF48695 50 481 1.07E-158 T 21-04-2016 IPR011031 Multihaem cytochrome APL_RS00525 a46bd7405bd6938554f0ead10b0393fe 502 Gene3D G3DSA:1.10.710.10 113 322 2.5E-16 T 21-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 19 206 4.6E-95 T 21-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 SUPERFAMILY SSF53335 30 208 2.76E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 PIRSF PIRSF005461 1 208 7.7E-82 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 PANTHER PTHR10920 1 208 2.9E-137 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 Gene3D G3DSA:3.40.50.150 3 207 2.3E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 Pfam PF01728 FtsJ-like methyltransferase 30 206 2.3E-56 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 PANTHER PTHR10920:SF20 1 208 2.9E-137 T 21-04-2016 APL_RS03120 13d31994dabb2f3a8a224d67abe6b60b 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 10 206 27.861 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 533 664 2.0E-36 T 21-04-2016 IPR020992 Tail specific protease, C-terminal APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 243 322 1.4E-13 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 SMART SM00228 248 325 1.1E-8 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Gene3D G3DSA:3.30.750.44 182 254 9.4E-5 T 21-04-2016 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 PANTHER PTHR32060:SF11 1 602 7.5E-266 T 21-04-2016 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 549 8.5E-115 T 21-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 SMART SM00245 327 529 1.4E-66 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 SUPERFAMILY SSF50156 218 351 1.1E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Gene3D G3DSA:3.90.226.10 337 531 1.0E-61 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Pfam PF03572 Peptidase family S41 357 527 9.7E-52 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 Gene3D G3DSA:2.30.42.10 255 336 2.7E-18 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 SUPERFAMILY SSF52096 172 266 7.79E-68 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 SUPERFAMILY SSF52096 351 535 7.79E-68 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00625 1873b7401eca278329b3dfd6a795fe8b 670 PANTHER PTHR32060 1 602 7.5E-266 T 21-04-2016 APL_RS06540 a689bfafa2c4adb0495a2a3fef7ed940 424 PANTHER PTHR10283:SF12 8 423 2.5E-157 T 21-04-2016 APL_RS06540 a689bfafa2c4adb0495a2a3fef7ed940 424 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 5 414 8.4E-63 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS06540 a689bfafa2c4adb0495a2a3fef7ed940 424 PANTHER PTHR10283 8 423 2.5E-157 T 21-04-2016 APL_RS06540 a689bfafa2c4adb0495a2a3fef7ed940 424 Pfam PF03600 Citrate transporter 15 347 1.0E-42 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 297 1.3E-58 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 Gene3D G3DSA:3.40.50.2000 7 149 1.4E-25 T 21-04-2016 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 PANTHER PTHR30160:SF12 5 336 7.6E-129 T 21-04-2016 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 SUPERFAMILY SSF53756 7 344 1.54E-83 T 21-04-2016 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 PANTHER PTHR30160 5 336 7.6E-129 T 21-04-2016 APL_RS00955 2e39fe3c39a2a5c201333f0de586f07f 348 Gene3D G3DSA:3.40.50.2000 166 344 3.7E-44 T 21-04-2016 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 SUPERFAMILY SSF53850 90 297 8.51E-23 T 21-04-2016 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 SUPERFAMILY SSF46785 4 82 1.79E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 PANTHER PTHR30537 1 298 8.9E-62 T 21-04-2016 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 Pfam PF03466 LysR substrate binding domain 91 293 2.5E-17 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.35E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.35E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.35E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 Gene3D G3DSA:3.40.190.10 118 174 9.2E-9 T 21-04-2016 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.7E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 Gene3D G3DSA:3.40.190.10 175 261 4.5E-13 T 21-04-2016 APL_RS08620 9382ea7418aeb66a21cebc3661c6daa4 299 Gene3D G3DSA:1.10.10.10 4 79 2.5E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 SUPERFAMILY SSF56059 489 623 1.1E-27 T 21-04-2016 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 SUPERFAMILY SSF56059 659 754 1.1E-27 T 21-04-2016 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 SUPERFAMILY SSF55931 3 459 1.11E-131 T 21-04-2016 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Pfam PF04262 Glutamate-cysteine ligase 7 252 1.4E-59 T 21-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Pfam PF04262 Glutamate-cysteine ligase 256 322 2.7E-13 T 21-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 489 590 1.1E-4 T 21-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 PANTHER PTHR38761 1 470 6.5E-58 T 21-04-2016 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Hamap MF_00782 Glutathione biosynthesis bifunctional protein GshAB [gshAB]. 1 757 424.257 T 21-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Gene3D G3DSA:3.30.1490.20 503 574 1.1E-10 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Gene3D G3DSA:3.30.470.20 652 739 4.2E-6 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Gene3D G3DSA:3.30.470.20 486 502 4.2E-6 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 Gene3D G3DSA:3.30.470.20 576 618 4.2E-6 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS07445 799931c45152f63e4b9b2fc3394d3e79 757 TIGRFAM TIGR01435 glu_cys_lig_rel: glutamate--cysteine ligase/glutathione synthase 12 753 3.2E-304 T 21-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 Gene3D G3DSA:2.70.70.10 100 142 4.1E-4 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 Pfam PF00529 HlyD membrane-fusion protein of T1SS 23 369 7.2E-8 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 382 4.7E-67 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 PANTHER PTHR30469 339 395 6.2E-112 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 PANTHER PTHR30469 8 316 6.2E-112 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 Gene3D G3DSA:2.40.50.100 84 99 1.3E-15 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 Gene3D G3DSA:2.40.50.100 174 205 1.3E-15 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 PANTHER PTHR30469:SF11 339 395 6.2E-112 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 PANTHER PTHR30469:SF11 8 316 6.2E-112 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 SUPERFAMILY SSF111369 70 284 1.06E-36 T 21-04-2016 APL_RS03075 0d7dd9c6d61e754959e9343a7e80a849 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 280 1.3E-26 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 PANTHER PTHR32125:SF1 1 232 1.1E-120 T 21-04-2016 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 Gene3D G3DSA:1.10.1270.20 165 248 5.1E-35 T 21-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 PIRSF PIRSF000386 1 251 4.7E-102 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 Gene3D G3DSA:3.40.1280.10 1 164 4.7E-67 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 PANTHER PTHR32125 1 232 1.1E-120 T 21-04-2016 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 116.615 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 SUPERFAMILY SSF75217 1 248 1.44E-100 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 238 5.3E-111 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APL_RS09505 5af9d319aef5f574217aecc4dcb0fa5a 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.6E-68 T 21-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 PANTHER PTHR21235 1 249 4.1E-115 T 21-04-2016 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 6 246 34.565 T 21-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 PANTHER PTHR21235:SF15 1 249 4.1E-115 T 21-04-2016 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 7 242 4.8E-78 T 21-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 Gene3D G3DSA:3.20.20.70 7 248 5.1E-77 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 SUPERFAMILY SSF51366 6 248 1.01E-64 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS10735 0ce087721c52f8872bc3161fc4742fb3 250 Pfam PF00977 Histidine biosynthesis protein 7 238 3.4E-75 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.8E-31 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 Gene3D G3DSA:3.10.290.10 18 68 3.7E-12 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 SUPERFAMILY SSF55120 78 321 1.42E-81 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 Pfam PF01479 S4 domain 19 65 6.3E-9 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 SUPERFAMILY SSF55174 18 69 9.76E-11 T 21-04-2016 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 PANTHER PTHR11079 7 323 1.0E-153 T 21-04-2016 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 3.3E-107 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 PANTHER PTHR11079:SF73 7 323 1.0E-153 T 21-04-2016 APL_RS05850 a97cca196a50bfb5cdb70b6fc5e20f2a 325 SMART SM00363 18 83 1.5E-9 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 Pfam PF00334 Nucleoside diphosphate kinase 3 137 1.5E-54 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 SUPERFAMILY SSF54919 1 137 1.13E-54 T 21-04-2016 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 1.2E-35 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 1.2E-35 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 1.2E-35 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 1.2E-35 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 1.2E-35 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 137 32.895 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 Gene3D G3DSA:3.30.70.141 2 137 4.1E-56 T 21-04-2016 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 PANTHER PTHR11349 1 138 1.0E-69 T 21-04-2016 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 113 121 - T 21-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS01810 ec5ec6ff300bd6fd58560cb43fab09c6 138 SMART SM00562 2 138 1.5E-76 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 10 262 6.5E-107 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 182 263 1.1E-29 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Gene3D G3DSA:1.20.1180.10 199 264 8.2E-27 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 155 183 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 54 5.8E-9 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 144 2.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 PIRSF PIRSF000456 6 264 8.3E-108 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 PANTHER PTHR23416 3 256 3.1E-136 T 21-04-2016 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Gene3D G3DSA:2.160.10.10 7 196 8.6E-51 T 21-04-2016 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 PANTHER PTHR23416:SF8 3 256 3.1E-136 T 21-04-2016 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 7 264 47.185 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APL_RS02090 caaae5a4c2b9009b65046a94b12281cb 264 SUPERFAMILY SSF51161 4 264 8.02E-83 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS07890 04685922100813e595bc640eacd81289 454 SUPERFAMILY SSF52151 56 249 1.07E-32 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APL_RS07890 04685922100813e595bc640eacd81289 454 SUPERFAMILY SSF52151 290 373 1.07E-32 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APL_RS07890 04685922100813e595bc640eacd81289 454 Pfam PF01734 Patatin-like phospholipase 60 302 1.3E-20 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APL_RS07890 04685922100813e595bc640eacd81289 454 Gene3D G3DSA:3.40.1090.10 47 243 1.1E-13 T 21-04-2016 APL_RS00920 4ac0da80270a8251224db071a9d9db4a 909 Pfam PF11739 Dicarboxylate transport 696 897 3.1E-52 T 21-04-2016 IPR021730 Dicarboxylate transport APL_RS00455 2de19eca65863fedccb98d67cdddabfa 141 SUPERFAMILY SSF140804 11 136 4.45E-33 T 21-04-2016 IPR027405 YidB-like APL_RS00455 2de19eca65863fedccb98d67cdddabfa 141 Gene3D G3DSA:1.10.10.690 2 137 2.0E-36 T 21-04-2016 IPR027405 YidB-like APL_RS00455 2de19eca65863fedccb98d67cdddabfa 141 Pfam PF06078 Bacterial protein of unknown function (DUF937) 7 113 1.5E-11 T 21-04-2016 IPR009282 Protein of unknown function DUF937 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 SUPERFAMILY SSF52540 1 197 4.56E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 PANTHER PTHR21343 1 199 1.2E-61 T 21-04-2016 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 PIRSF PIRSF006755 1 214 1.8E-64 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 175 2.1E-54 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 Gene3D G3DSA:3.40.50.300 1 197 8.3E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 209 25.64 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 Pfam PF13500 AAA domain 5 192 3.2E-29 T 21-04-2016 APL_RS04900 62ee9f74ae00a1552ed7100c58a7a98d 214 PANTHER PTHR21343:SF0 1 199 1.2E-61 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 Gene3D G3DSA:3.40.50.980 154 292 5.5E-24 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 PANTHER PTHR24096:SF109 11 462 1.0E-151 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 SUPERFAMILY SSF56801 11 442 1.57E-82 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 21-04-2016 IPR020845 AMP-binding, conserved site APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 PANTHER PTHR24096 11 462 1.0E-151 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 Pfam PF00501 AMP-binding enzyme 13 366 2.8E-44 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 Gene3D G3DSA:3.30.300.30 361 461 5.4E-15 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 41 459 1.4E-136 T 21-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 Gene3D G3DSA:3.40.50.980 12 153 8.0E-19 T 21-04-2016 APL_RS03905 59f68f3a79527f0d4128bcec655bb3eb 476 Gene3D G3DSA:2.30.38.10 307 359 4.0E-5 T 21-04-2016 APL_RS05070 c88bc89d5d71a6322b5c821ce546ab82 405 Pfam PF03616 Sodium/glutamate symporter 5 373 6.7E-144 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APL_RS05070 c88bc89d5d71a6322b5c821ce546ab82 405 PANTHER PTHR36178:SF1 1 405 1.7E-171 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APL_RS05070 c88bc89d5d71a6322b5c821ce546ab82 405 PANTHER PTHR36178 1 405 1.7E-171 T 21-04-2016 APL_RS05070 c88bc89d5d71a6322b5c821ce546ab82 405 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 6 403 5.5E-157 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 Pfam PF03602 Conserved hypothetical protein 95 17 194 1.7E-61 T 21-04-2016 APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 Gene3D G3DSA:3.40.50.150 11 195 2.6E-63 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 PIRSF PIRSF004553 16 197 2.7E-54 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 PANTHER PTHR18895:SF60 16 195 4.4E-44 T 21-04-2016 APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 PANTHER PTHR18895 16 195 4.4E-44 T 21-04-2016 APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 SUPERFAMILY SSF53335 17 190 2.51E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS07090 542ecd0749f9f14a15d62e490b2ea0fd 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 11 195 6.4E-65 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS04555 2211ba5861970365fa68140392920fc2 861 SUPERFAMILY SSF52374 416 668 3.76E-145 T 21-04-2016 APL_RS04555 2211ba5861970365fa68140392920fc2 861 SUPERFAMILY SSF52374 4 226 3.76E-145 T 21-04-2016 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.027 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946:SF7 614 861 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946:SF7 240 571 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946:SF7 1 206 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 SUPERFAMILY SSF47323 662 859 3.74E-35 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946 614 861 0.0 T 21-04-2016 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946 240 571 0.0 T 21-04-2016 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PANTHER PTHR11946 1 206 0.0 T 21-04-2016 APL_RS04555 2211ba5861970365fa68140392920fc2 861 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Pfam PF08264 Anticodon-binding domain of tRNA 699 823 5.5E-18 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Gene3D G3DSA:3.40.50.620 3 222 8.1E-154 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS04555 2211ba5861970365fa68140392920fc2 861 Gene3D G3DSA:3.40.50.620 618 647 8.1E-154 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS04555 2211ba5861970365fa68140392920fc2 861 Gene3D G3DSA:3.40.50.620 425 573 8.1E-154 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS04555 2211ba5861970365fa68140392920fc2 861 Gene3D G3DSA:1.10.730.10 648 795 5.7E-46 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Gene3D G3DSA:3.90.740.10 223 424 2.4E-57 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.2E-51 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APL_RS04555 2211ba5861970365fa68140392920fc2 861 SUPERFAMILY SSF50677 226 415 4.29E-56 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 1.7E-8 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 1.6E-7 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 2.0E-28 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04555 2211ba5861970365fa68140392920fc2 861 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.3E-78 T 21-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 SMART SM01091 205 283 8.6E-28 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 PANTHER PTHR22777 15 291 4.3E-112 T 21-04-2016 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 SMART SM00116 77 127 0.089 T 21-04-2016 IPR000644 CBS domain APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 SMART SM00116 141 189 0.063 T 21-04-2016 IPR000644 CBS domain APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 Gene3D G3DSA:3.30.465.10 198 284 9.4E-30 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 SUPERFAMILY SSF56176 203 285 8.18E-22 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 PANTHER PTHR22777:SF17 15 291 4.3E-112 T 21-04-2016 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 Pfam PF03471 Transporter associated domain 206 281 2.5E-21 T 21-04-2016 IPR005170 Transporter-associated domain APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 SUPERFAMILY SSF54631 64 200 6.95E-31 T 21-04-2016 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 Gene3D G3DSA:3.10.580.10 54 197 1.3E-23 T 21-04-2016 APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 Pfam PF00571 CBS domain 68 126 4.1E-9 T 21-04-2016 IPR000644 CBS domain APL_RS01915 74265d9ff06c2b5735779e9b60e852a5 297 Pfam PF00571 CBS domain 140 189 8.9E-5 T 21-04-2016 IPR000644 CBS domain APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 SUPERFAMILY SSF109998 248 427 6.97E-45 T 21-04-2016 IPR027304 Trigger factor/SurA domain APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Gene3D G3DSA:3.30.70.1050 1 118 2.0E-37 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 SUPERFAMILY SSF102735 1 131 1.96E-39 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.1E-40 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Gene3D G3DSA:1.10.3120.10 216 387 7.7E-59 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 PANTHER PTHR30560:SF3 1 429 1.4E-130 T 21-04-2016 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Gene3D G3DSA:3.10.50.40 152 215 1.4E-8 T 21-04-2016 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 SUPERFAMILY SSF54534 90 241 1.0E-37 T 21-04-2016 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 411 5.7E-36 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Hamap MF_00303 Trigger factor [tig]. 1 417 21.203 T 21-04-2016 IPR005215 Trigger factor GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 PIRSF PIRSF003095 1 433 1.3E-120 T 21-04-2016 IPR005215 Trigger factor GO:0015031 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 PANTHER PTHR30560 1 429 1.4E-130 T 21-04-2016 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 237 3.8E-14 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APL_RS07945 ff6c478b62d4daa4e5eb31fad16f7e0b 433 TIGRFAM TIGR00115 tig: trigger factor 11 410 7.6E-136 T 21-04-2016 IPR005215 Trigger factor GO:0015031 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 PANTHER PTHR30108:SF10 1 182 5.1E-75 T 21-04-2016 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 SUPERFAMILY SSF52507 4 183 2.88E-58 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 Pfam PF02441 Flavoprotein 4 127 4.0E-26 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 185 34.905 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 Gene3D G3DSA:3.40.50.1950 3 186 3.9E-71 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 PANTHER PTHR30108 1 182 5.1E-75 T 21-04-2016 APL_RS03810 e51b2044dc5a39e1568b519ee9209041 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 4 183 2.6E-64 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PANTHER PTHR11910 8 175 2.9E-49 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.8E-25 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.8E-25 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.8E-25 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.8E-25 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.8E-25 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 SUPERFAMILY SSF47928 3 104 1.26E-28 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 3.7E-51 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.3E-55 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 Gene3D G3DSA:1.10.520.20 2 104 2.8E-35 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APL_RS08765 3bd2cc3bee35abcb8ce76f1ca14c84a4 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.345 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 Gene3D G3DSA:3.40.190.10 176 264 3.9E-24 T 21-04-2016 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 PANTHER PTHR30346 1 292 4.7E-120 T 21-04-2016 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.6E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 SUPERFAMILY SSF53850 88 292 1.25E-36 T 21-04-2016 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 Gene3D G3DSA:1.10.10.10 2 83 6.3E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 PANTHER PTHR30346:SF15 1 292 4.7E-120 T 21-04-2016 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 SUPERFAMILY SSF46785 2 86 2.2E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 Gene3D G3DSA:3.40.190.10 90 175 9.0E-16 T 21-04-2016 APL_RS07810 678ff3a84a5406c0081a03a3739aac32 297 Pfam PF03466 LysR substrate binding domain 88 283 1.3E-40 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS06740 6b60d15910dd511de1db30e52893d09d 122 Pfam PF00581 Rhodanese-like domain 28 115 6.3E-14 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS06740 6b60d15910dd511de1db30e52893d09d 122 SUPERFAMILY SSF52821 11 121 6.94E-26 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS06740 6b60d15910dd511de1db30e52893d09d 122 PANTHER PTHR12231 43 120 2.4E-12 T 21-04-2016 APL_RS06740 6b60d15910dd511de1db30e52893d09d 122 SMART SM00450 25 122 7.5E-22 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS06740 6b60d15910dd511de1db30e52893d09d 122 Gene3D G3DSA:3.40.250.10 39 121 8.4E-27 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Pfam PF00970 Oxidoreductase FAD-binding domain 206 268 6.3E-11 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 SUPERFAMILY SSF54292 37 126 1.1E-21 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 409 63.39 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 SUPERFAMILY SSF52343 257 404 6.55E-37 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 SUPERFAMILY SSF63380 107 274 1.55E-37 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PANTHER PTHR19370 207 409 9.0E-145 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 409 1.7E-229 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 46 116 1.6E-10 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Gene3D G3DSA:2.40.30.10 126 266 6.0E-64 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PANTHER PTHR19370 64 178 9.0E-145 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PANTHER PTHR19370:SF32 207 409 9.0E-145 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Gene3D G3DSA:3.40.50.80 271 408 3.2E-41 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Pfam PF00175 Oxidoreductase NAD-binding domain 279 388 6.5E-19 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PANTHER PTHR19370:SF32 64 178 9.0E-145 T 21-04-2016 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 375 383 6.6E-7 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 218 6.6E-7 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 316 327 6.6E-7 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 297 6.6E-7 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 313 6.6E-7 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 Gene3D G3DSA:3.10.20.30 36 125 5.3E-22 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS00800 04d07a520548351b7cfe63f367be95c9 409 PIRSF PIRSF000044 2 409 4.6E-227 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 SUPERFAMILY SSF53850 27 335 3.72E-98 T 21-04-2016 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 PANTHER PTHR30570:SF0 10 345 1.5E-137 T 21-04-2016 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 28 336 2.1E-124 T 21-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 Gene3D G3DSA:3.40.190.10 180 338 2.3E-32 T 21-04-2016 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 Gene3D G3DSA:3.40.190.10 26 177 1.6E-53 T 21-04-2016 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 Pfam PF12849 PBP superfamily domain 26 307 3.9E-60 T 21-04-2016 IPR024370 PBP domain APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 PANTHER PTHR30570 10 345 1.5E-137 T 21-04-2016 APL_RS06580 e0eff60fb48a1bc8e8cde79035d9b201 347 PIRSF PIRSF002756 6 339 1.8E-110 T 21-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APL_RS00185 42c3b3b0cb58e4be4050921728a11abc 154 Pfam PF05433 Glycine zipper 2TM domain 63 102 4.5E-8 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APL_RS00185 42c3b3b0cb58e4be4050921728a11abc 154 PANTHER PTHR35603:SF1 1 152 2.4E-41 T 21-04-2016 APL_RS00185 42c3b3b0cb58e4be4050921728a11abc 154 PANTHER PTHR35603 1 152 2.4E-41 T 21-04-2016 APL_RS03475 b3a7a1a7b347b25844c78f585959c566 129 Gene3D G3DSA:3.40.50.1010 1 127 4.7E-31 T 21-04-2016 IPR029060 PIN domain-like APL_RS03475 b3a7a1a7b347b25844c78f585959c566 129 Pfam PF01850 PIN domain 2 117 3.2E-14 T 21-04-2016 IPR002716 PIN domain APL_RS03475 b3a7a1a7b347b25844c78f585959c566 129 PANTHER PTHR33653 1 127 1.8E-31 T 21-04-2016 APL_RS03475 b3a7a1a7b347b25844c78f585959c566 129 SUPERFAMILY SSF88723 1 128 3.08E-36 T 21-04-2016 IPR029060 PIN domain-like APL_RS03475 b3a7a1a7b347b25844c78f585959c566 129 PANTHER PTHR33653:SF2 1 127 1.8E-31 T 21-04-2016 APL_RS00540 b550f6f97e61511d4f4f95c14835fb04 322 PANTHER PTHR34856 7 319 3.3E-98 T 21-04-2016 APL_RS00540 b550f6f97e61511d4f4f95c14835fb04 322 Gene3D G3DSA:1.20.1630.10 12 277 2.0E-4 T 21-04-2016 APL_RS00540 b550f6f97e61511d4f4f95c14835fb04 322 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 321 1.6E-144 T 21-04-2016 IPR017566 NrfD APL_RS00540 b550f6f97e61511d4f4f95c14835fb04 322 Pfam PF03916 Polysulphide reductase, NrfD 6 321 1.2E-90 T 21-04-2016 IPR005614 NrfD family APL_RS00540 b550f6f97e61511d4f4f95c14835fb04 322 PANTHER PTHR34856:SF2 7 319 3.3E-98 T 21-04-2016 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 SUPERFAMILY SSF55486 1 674 4.29E-203 T 21-04-2016 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 Pfam PF01432 Peptidase family M3 221 674 1.0E-161 T 21-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 PANTHER PTHR11804 2 675 0.0 T 21-04-2016 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 Gene3D G3DSA:3.40.390.10 359 503 9.4E-61 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 Gene3D G3DSA:1.20.1050.40 10 137 1.2E-25 T 21-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APL_RS05405 8848d92d643c100baabd068bbe167f22 677 PANTHER PTHR11804:SF8 2 675 0.0 T 21-04-2016 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 Gene3D G3DSA:1.10.1370.10 139 348 3.4E-135 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APL_RS05405 8848d92d643c100baabd068bbe167f22 677 Gene3D G3DSA:1.10.1370.10 504 675 3.4E-135 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 SMART SM00257 95 144 9.6E-12 T 21-04-2016 IPR018392 LysM domain APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 Pfam PF04972 BON domain 20 84 2.1E-10 T 21-04-2016 IPR007055 BON domain APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 SUPERFAMILY SSF54106 94 144 3.66E-8 T 21-04-2016 IPR018392 LysM domain APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 PANTHER PTHR34700 88 144 3.9E-16 T 21-04-2016 APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 Gene3D G3DSA:3.10.350.10 95 145 2.2E-12 T 21-04-2016 IPR018392 LysM domain APL_RS07940 22575b0ce9753e00069abeb85e1b8c8c 147 Pfam PF01476 LysM domain 96 144 2.4E-12 T 21-04-2016 IPR018392 LysM domain APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 179 16.085 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Gene3D G3DSA:3.40.630.30 215 282 7.1E-13 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Gene3D G3DSA:3.40.630.30 133 177 7.1E-13 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Gene3D G3DSA:3.40.390.30 3 113 6.6E-27 T 21-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Pfam PF13718 GNAT acetyltransferase 2 131 242 1.3E-14 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 SUPERFAMILY SSF55729 137 282 6.45E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 114 6.1E-17 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 SUPERFAMILY SSF55486 5 113 1.71E-24 T 21-04-2016 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Pfam PF17176 tRNA-binding domain 302 408 3.6E-16 T 21-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 APL_RS05005 dec42b75a036528c208d9d91ab0e8d52 409 Pfam PF02130 Uncharacterized protein family UPF0054 27 114 1.8E-19 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 SUPERFAMILY SSF54189 2 92 2.19E-31 T 21-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 Pfam PF00276 Ribosomal protein L23 9 95 3.1E-33 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 Gene3D G3DSA:3.30.70.330 6 98 3.5E-35 T 21-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 21-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 PANTHER PTHR11620 9 95 9.8E-33 T 21-04-2016 APL_RS09370 bbfa7dedfc3e3478fa7d34e3b18c47b7 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.288 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APL_RS10140 3312d98caee55262d287e30888b5d693 332 PANTHER PTHR30036 1 331 4.6E-161 T 21-04-2016 APL_RS10140 3312d98caee55262d287e30888b5d693 332 PANTHER PTHR30036:SF1 1 331 4.6E-161 T 21-04-2016 APL_RS10140 3312d98caee55262d287e30888b5d693 332 Gene3D G3DSA:3.40.50.2300 143 317 3.1E-49 T 21-04-2016 APL_RS10140 3312d98caee55262d287e30888b5d693 332 SUPERFAMILY SSF53822 24 318 6.39E-73 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS10140 3312d98caee55262d287e30888b5d693 332 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 329 2.7E-161 T 21-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 APL_RS10140 3312d98caee55262d287e30888b5d693 332 Gene3D G3DSA:3.40.50.2300 25 142 5.6E-37 T 21-04-2016 APL_RS10140 3312d98caee55262d287e30888b5d693 332 Pfam PF13407 Periplasmic binding protein domain 29 285 2.0E-63 T 21-04-2016 IPR025997 Periplasmic binding protein APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 Pfam PF14559 Tetratricopeptide repeat 198 254 7.6E-7 T 21-04-2016 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 Gene3D G3DSA:1.25.40.10 42 166 1.9E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 SUPERFAMILY SSF48452 39 255 2.18E-18 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 PANTHER PTHR23083 8 341 3.1E-15 T 21-04-2016 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 Gene3D G3DSA:1.25.40.10 167 272 5.7E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 SMART SM00028 149 182 19.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 SMART SM00028 77 109 160.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 SMART SM00028 221 254 3.9E-4 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03835 20ad63dcdac57c9c1dafa717184d457f 398 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 394 33.783 T 21-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 APL_RS00605 72dd790bfbb1dffbf61583137a2f7899 194 Gene3D G3DSA:1.10.287.460 29 86 2.9E-4 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 Gene3D G3DSA:3.30.420.40 79 216 6.9E-10 T 21-04-2016 APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 SUPERFAMILY SSF46785 6 69 2.12E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 SUPERFAMILY SSF53067 78 197 4.05E-7 T 21-04-2016 APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 Gene3D G3DSA:1.10.10.10 5 72 9.8E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 SUPERFAMILY SSF53067 203 388 6.55E-15 T 21-04-2016 APL_RS03225 b5d319bebe47f048d4315cc46ca5e964 396 Gene3D G3DSA:3.30.420.40 217 356 2.8E-13 T 21-04-2016 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 SUPERFAMILY SSF55347 126 274 3.6E-61 T 21-04-2016 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.958 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 6.6E-36 T 21-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Gene3D G3DSA:1.10.1740.10 313 393 8.1E-27 T 21-04-2016 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 394 1.0E-178 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 PIRSF PIRSF006205 1 396 4.4E-153 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Gene3D G3DSA:3.40.50.720 1 150 9.0E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.9E-47 T 21-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 SUPERFAMILY SSF69055 301 393 1.02E-29 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 PANTHER PTHR30525 1 393 5.5E-222 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 SUPERFAMILY SSF51735 2 150 6.09E-46 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02085 3f7b6f00da9cfbb6b4fc0b4d17a00cd0 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 9.1E-39 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS00670 878454787cd0074f7c9cd5c383af6300 197 Pfam PF01351 Ribonuclease HII 14 190 3.2E-40 T 21-04-2016 IPR024567 Ribonuclease HII/HIII domain APL_RS00670 878454787cd0074f7c9cd5c383af6300 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.329 T 21-04-2016 IPR022898 Ribonuclease HII GO:0004523 APL_RS00670 878454787cd0074f7c9cd5c383af6300 197 PANTHER PTHR10954 5 196 5.5E-84 T 21-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APL_RS00670 878454787cd0074f7c9cd5c383af6300 197 Gene3D G3DSA:3.30.420.10 12 152 3.6E-47 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS00670 878454787cd0074f7c9cd5c383af6300 197 SUPERFAMILY SSF53098 4 196 5.16E-71 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 PANTHER PTHR30074 6 223 1.4E-120 T 21-04-2016 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 PANTHER PTHR30074:SF5 6 223 1.4E-120 T 21-04-2016 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 Pfam PF01292 Prokaryotic cytochrome b561 15 192 4.1E-22 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 12 211 5.5E-82 T 21-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 SUPERFAMILY SSF81342 11 211 1.57E-50 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APL_RS04670 2a4827ffa13357a1c74f5812de4432d0 223 Gene3D G3DSA:1.20.950.20 10 219 2.4E-69 T 21-04-2016 APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 Gene3D G3DSA:3.90.870.10 2 184 3.1E-41 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 182 33.789 T 21-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 SUPERFAMILY SSF55821 2 181 2.62E-43 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 Pfam PF01300 Telomere recombination 10 176 4.6E-32 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 PANTHER PTHR17490:SF8 1 179 1.4E-75 T 21-04-2016 APL_RS05965 7e9d396095aa291f12d0cd31bc4e6223 184 PANTHER PTHR17490 1 179 1.4E-75 T 21-04-2016 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 4.2E-67 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 PANTHER PTHR23152:SF4 7 936 0.0 T 21-04-2016 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 PANTHER PTHR23152 7 936 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Gene3D G3DSA:3.40.50.970 594 798 1.5E-27 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 SUPERFAMILY SSF52518 577 794 6.77E-54 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Gene3D G3DSA:3.40.50.970 163 546 7.2E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Pfam PF00676 Dehydrogenase E1 component 221 517 2.7E-53 T 21-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 SMART SM00861 594 787 1.2E-63 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 934 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 934 4.0E-56 T 21-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 SUPERFAMILY SSF52518 121 540 6.55E-84 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 PIRSF PIRSF000157 1 936 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APL_RS02340 6e864fd60b5b8b46eb860a0e52552193 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 51 1.7E-14 T 21-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.2E-16 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 411 52.629 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 SUPERFAMILY SSF81891 120 364 7.85E-56 T 21-04-2016 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 PIRSF PIRSF000813 1 411 2.2E-196 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 SUPERFAMILY SSF81301 1 119 3.6E-30 T 21-04-2016 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Hamap MF_01262 CCA-adding enzyme [cca]. 1 405 41.678 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Pfam PF01743 Poly A polymerase head domain 3 122 3.3E-18 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Pfam PF01966 HD domain 231 314 2.7E-10 T 21-04-2016 IPR006674 HD domain APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Gene3D G3DSA:1.10.3090.10 122 365 1.1E-58 T 21-04-2016 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 Gene3D G3DSA:3.30.460.10 1 121 8.2E-31 T 21-04-2016 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 PANTHER PTHR13734 1 265 3.9E-74 T 21-04-2016 APL_RS04780 bd4ca7187304c03df6a3ad700ee6af47 411 TIGRFAM TIGR00277 HDIG: HDIG domain 231 300 2.7E-7 T 21-04-2016 IPR006675 HDIG domain APL_RS07175 e01a38e431dcc1b7150de5dd2b1f6d3f 192 Pfam PF13580 SIS domain 10 144 1.2E-18 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS07175 e01a38e431dcc1b7150de5dd2b1f6d3f 192 SUPERFAMILY SSF53697 1 190 1.03E-34 T 21-04-2016 APL_RS07175 e01a38e431dcc1b7150de5dd2b1f6d3f 192 PANTHER PTHR30390:SF5 1 191 1.2E-66 T 21-04-2016 APL_RS07175 e01a38e431dcc1b7150de5dd2b1f6d3f 192 PANTHER PTHR30390 1 191 1.2E-66 T 21-04-2016 APL_RS07175 e01a38e431dcc1b7150de5dd2b1f6d3f 192 Gene3D G3DSA:3.40.50.10490 2 191 5.7E-34 T 21-04-2016 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Gene3D G3DSA:1.10.1780.10 1 145 5.8E-46 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 8.3E-14 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Gene3D G3DSA:1.10.8.60 341 426 3.4E-37 T 21-04-2016 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PANTHER PTHR11638 1 854 0.0 T 21-04-2016 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 21-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 PANTHER PTHR11638:SF18 1 854 0.0 T 21-04-2016 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SUPERFAMILY SSF52540 546 845 3.48E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SMART SM01086 765 854 8.2E-39 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 143 4.7E-12 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.2E-11 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Gene3D G3DSA:1.10.8.60 776 855 1.5E-29 T 21-04-2016 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 6.5E-56 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SMART SM00382 597 745 2.6E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SMART SM00382 196 342 1.7E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 21-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 3.3E-25 T 21-04-2016 IPR019489 Clp ATPase, C-terminal APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 21-04-2016 IPR028299 ClpA/B, conserved site 2 APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Gene3D G3DSA:3.40.50.300 158 340 1.5E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SUPERFAMILY SSF52540 157 545 2.35E-98 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 Gene3D G3DSA:3.40.50.300 550 775 3.0E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05670 3542e8a4437079a0363642b9cdda3a34 857 SUPERFAMILY SSF81923 4 154 1.12E-41 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Gene3D G3DSA:3.30.300.30 458 559 4.5E-28 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Gene3D G3DSA:2.30.38.10 381 452 2.5E-28 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Gene3D G3DSA:3.40.50.980 185 216 4.3E-40 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Gene3D G3DSA:3.40.50.980 24 152 4.3E-40 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 SUPERFAMILY SSF56801 21 556 6.41E-146 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Pfam PF00501 AMP-binding enzyme 29 461 7.5E-110 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 21-04-2016 IPR020845 AMP-binding, conserved site APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 PANTHER PTHR24096 176 553 2.7E-173 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 PANTHER PTHR24096 21 153 2.7E-173 T 21-04-2016 APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 9.8E-16 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APL_RS02040 4e11b79de24bdd4a226b68aab7f552f7 563 Gene3D G3DSA:3.40.50.980 217 380 8.1E-42 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PANTHER PTHR11946:SF11 283 938 0.0 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PANTHER PTHR11946:SF11 6 260 0.0 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.521 T 21-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 9.6E-7 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 SUPERFAMILY SSF52374 403 648 1.65E-138 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 SUPERFAMILY SSF52374 2 202 1.65E-138 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 642 2.3E-227 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Gene3D G3DSA:1.10.730.10 644 785 1.0E-41 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 SUPERFAMILY SSF50677 204 403 4.71E-56 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 4.1E-34 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 571 4.1E-34 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 4.1E-34 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 4.1E-34 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.1E-34 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 SUPERFAMILY SSF47323 653 929 6.35E-80 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 846 2.9E-294 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Gene3D G3DSA:3.90.740.10 207 389 7.0E-58 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PANTHER PTHR11946 283 938 0.0 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 PANTHER PTHR11946 6 260 0.0 T 21-04-2016 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Pfam PF08264 Anticodon-binding domain of tRNA 686 844 8.4E-28 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Gene3D G3DSA:3.40.50.620 14 200 3.5E-137 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00220 5f1f67b9c401bb051c317536c04d6a97 938 Gene3D G3DSA:3.40.50.620 406 637 3.5E-137 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 Gene3D G3DSA:3.40.50.720 5 251 1.1E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 SUPERFAMILY SSF69572 7 253 2.88E-65 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 Pfam PF00899 ThiF family 18 201 5.4E-39 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 PANTHER PTHR10953:SF159 196 252 3.9E-122 T 21-04-2016 APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 PANTHER PTHR10953:SF159 8 163 3.9E-122 T 21-04-2016 APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 PANTHER PTHR10953 196 252 3.9E-122 T 21-04-2016 APL_RS01515 8c5ffa4271f58a063cf85af8bf6f4096 254 PANTHER PTHR10953 8 163 3.9E-122 T 21-04-2016 APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 Gene3D G3DSA:3.40.50.2300 141 288 2.1E-52 T 21-04-2016 APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 PANTHER PTHR32196 19 288 1.9E-106 T 21-04-2016 APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 SUPERFAMILY SSF53822 23 288 2.36E-83 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 Gene3D G3DSA:3.40.50.2300 23 140 1.0E-43 T 21-04-2016 APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 Pfam PF13407 Periplasmic binding protein domain 26 276 2.1E-60 T 21-04-2016 IPR025997 Periplasmic binding protein APL_RS08880 47cdb03817eead81e7f8922ce4bf983f 290 PANTHER PTHR32196:SF9 19 288 1.9E-106 T 21-04-2016 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 SUPERFAMILY SSF51735 102 268 4.41E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 SUPERFAMILY SSF53223 2 101 3.74E-27 T 21-04-2016 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.3E-20 T 21-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 PANTHER PTHR21089 1 271 1.7E-117 T 21-04-2016 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 189 1.1E-9 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 1.7E-94 T 21-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 30.029 T 21-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 Gene3D G3DSA:3.40.192.10 2 107 3.0E-30 T 21-04-2016 APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 Gene3D G3DSA:3.40.50.720 108 244 2.1E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS05960 c9bfbeda131b8ee2c81383a6152b5893 274 PANTHER PTHR21089:SF2 1 271 1.7E-117 T 21-04-2016 APL_RS03750 64e8daea6bc9c12882a6eead6a931053 201 PIRSF PIRSF006158 1 201 5.8E-58 T 21-04-2016 IPR016476 SH3 domain protein APL_RS03750 64e8daea6bc9c12882a6eead6a931053 201 SMART SM00287 21 85 3.4E-8 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type APL_RS03750 64e8daea6bc9c12882a6eead6a931053 201 Pfam PF08239 Bacterial SH3 domain 32 82 2.7E-9 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type APL_RS03750 64e8daea6bc9c12882a6eead6a931053 201 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 25 200 2.4E-48 T 21-04-2016 IPR016476 SH3 domain protein APL_RS08245 b294add1343842a0358f78f0b177291b 378 Gene3D G3DSA:3.40.50.2000 3 213 6.5E-84 T 21-04-2016 APL_RS08245 b294add1343842a0358f78f0b177291b 378 SUPERFAMILY SSF53756 4 377 5.58E-135 T 21-04-2016 APL_RS08245 b294add1343842a0358f78f0b177291b 378 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 375 2.3E-151 T 21-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APL_RS08245 b294add1343842a0358f78f0b177291b 378 PANTHER PTHR18964:SF2 3 378 2.6E-189 T 21-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APL_RS08245 b294add1343842a0358f78f0b177291b 378 Gene3D G3DSA:3.40.50.2000 214 375 2.5E-62 T 21-04-2016 APL_RS08245 b294add1343842a0358f78f0b177291b 378 PANTHER PTHR18964 3 378 2.6E-189 T 21-04-2016 APL_RS08245 b294add1343842a0358f78f0b177291b 378 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 374 1.5E-118 T 21-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 SUPERFAMILY SSF50182 7 69 5.39E-24 T 21-04-2016 IPR010920 LSM domain APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.307 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.2E-29 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 Gene3D G3DSA:2.30.30.100 1 73 4.3E-37 T 21-04-2016 APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 PANTHER PTHR34772:SF1 1 74 2.7E-40 T 21-04-2016 APL_RS10390 53428ba65056b6b9e8ce1caaa2ac3111 92 PANTHER PTHR34772 1 74 2.7E-40 T 21-04-2016 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Gene3D G3DSA:1.10.150.300 131 200 4.1E-29 T 21-04-2016 IPR023192 TGS-like domain APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PIRSF PIRSF006641 1 363 5.3E-161 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.489 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PANTHER PTHR23305 1 363 4.3E-218 T 21-04-2016 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 4.5E-22 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 6.8E-40 T 21-04-2016 IPR013029 Domain of unknown function DUF933 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Gene3D G3DSA:3.40.50.300 4 130 1.9E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Gene3D G3DSA:3.40.50.300 201 266 1.9E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-35 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-35 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-35 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-35 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-178 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 Gene3D G3DSA:3.10.20.30 267 363 3.0E-50 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 SUPERFAMILY SSF52540 3 301 1.5E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00170 1bc21308b2ce3be6e1ef5572489dde8b 363 SUPERFAMILY SSF81271 279 360 1.44E-36 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APL_RS08625 c355087316581cd6c9f7e7bb8e074218 153 SUPERFAMILY SSF54427 36 124 1.5E-9 T 21-04-2016 IPR032710 NTF2-like domain APL_RS08625 c355087316581cd6c9f7e7bb8e074218 153 Pfam PF14534 Domain of unknown function (DUF4440) 42 108 1.3E-7 T 21-04-2016 IPR027843 Domain of unknown function DUF4440 APL_RS08625 c355087316581cd6c9f7e7bb8e074218 153 Gene3D G3DSA:3.10.450.50 35 131 8.9E-19 T 21-04-2016 IPR032710 NTF2-like domain APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 Gene3D G3DSA:3.90.110.10 147 316 4.1E-54 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 SUPERFAMILY SSF56327 146 316 6.49E-39 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 PIRSF PIRSF000102 1 315 3.2E-59 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 Gene3D G3DSA:3.40.50.720 1 146 3.0E-55 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 316 8.0E-120 T 21-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 SUPERFAMILY SSF51735 1 145 1.02E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.9E-45 T 21-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 316 58.317 T 21-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 315 2.2E-38 T 21-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 PANTHER PTHR11540:SF22 1 316 2.1E-168 T 21-04-2016 APL_RS06800 6e71df0efdc90a0c616ff72534e25923 317 PANTHER PTHR11540 1 316 2.1E-168 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APL_RS06500 68fe1c0886304aa10223a108902436bf 172 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 172 88.847 T 21-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 APL_RS06500 68fe1c0886304aa10223a108902436bf 172 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 7 171 9.1E-69 T 21-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria APL_RS06500 68fe1c0886304aa10223a108902436bf 172 PANTHER PTHR38596:SF1 8 172 4.7E-79 T 21-04-2016 APL_RS06500 68fe1c0886304aa10223a108902436bf 172 Pfam PF03350 Uncharacterized protein family, UPF0114 13 129 3.2E-39 T 21-04-2016 IPR005134 Uncharacterised protein family UPF0114 APL_RS06500 68fe1c0886304aa10223a108902436bf 172 PANTHER PTHR38596 8 172 4.7E-79 T 21-04-2016 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 Gene3D G3DSA:3.40.1190.20 3 306 1.6E-82 T 21-04-2016 IPR029056 Ribokinase-like APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 PANTHER PTHR10584 1 307 1.0E-100 T 21-04-2016 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.1E-67 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 PRINTS PR00990 Ribokinase signature 214 225 4.35E-8 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 PRINTS PR00990 Ribokinase signature 174 189 4.35E-8 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 PRINTS PR00990 Ribokinase signature 22 41 4.35E-8 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 PANTHER PTHR10584:SF161 1 307 1.0E-100 T 21-04-2016 APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 SUPERFAMILY SSF53613 1 305 1.71E-79 T 21-04-2016 IPR029056 Ribokinase-like APL_RS10775 e22e6698137ebf7386f8b963f7451153 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 PANTHER PTHR12029 82 345 3.1E-93 T 21-04-2016 APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 SUPERFAMILY SSF75217 185 342 7.85E-21 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 PIRSF PIRSF006280 1 345 4.8E-123 T 21-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 SUPERFAMILY SSF55315 100 180 2.47E-10 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 PANTHER PTHR12029:SF57 82 345 3.1E-93 T 21-04-2016 APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 Pfam PF00588 SpoU rRNA Methylase family 200 336 1.4E-14 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 Gene3D G3DSA:3.30.1330.30 99 180 6.7E-8 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 111 181 2.5E-12 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 Gene3D G3DSA:3.40.1280.10 193 340 9.1E-18 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS01050 7ee26db0aca572aa613c7f106ecd12d6 345 SMART SM00967 110 185 3.6E-11 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 Gene3D G3DSA:3.40.190.10 33 123 4.2E-34 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 Gene3D G3DSA:3.40.190.10 215 258 4.2E-34 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 Gene3D G3DSA:3.40.190.10 124 212 1.9E-25 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 SUPERFAMILY SSF53850 1 257 2.49E-57 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 PANTHER PTHR18966 32 257 2.8E-75 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 1.4E-54 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 PANTHER PTHR18966:SF208 32 257 2.8E-75 T 21-04-2016 APL_RS08805 becfe8aeb4918935c6739f9de3542c89 260 SMART SM00062 36 256 1.3E-66 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 Gene3D G3DSA:2.60.40.180 24 137 7.6E-42 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 PANTHER PTHR10395 26 137 3.4E-40 T 21-04-2016 APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 SUPERFAMILY SSF49472 24 137 1.29E-39 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 SMART SM00095 21 136 1.6E-7 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 ProSitePatterns PS00768 Transthyretin signature 1. 29 44 - T 21-04-2016 IPR023418 Transthyretin, thyroxine binding site APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 Pfam PF00576 HIUase/Transthyretin family 26 136 7.3E-40 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 25 137 8.9E-43 T 21-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 21-04-2016 IPR023419 Transthyretin, conserved site APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 PRINTS PR00189 Transthyretin signature 87 116 2.2E-8 T 21-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 PRINTS PR00189 Transthyretin signature 25 45 2.2E-8 T 21-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APL_RS04290 30f8ddbfc744145c1bcd3be953a89caa 137 PANTHER PTHR10395:SF7 26 137 3.4E-40 T 21-04-2016 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 SUPERFAMILY SSF52540 172 353 6.79E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PANTHER PTHR10229:SF0 2 401 2.1E-156 T 21-04-2016 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PIRSF PIRSF006809 1 394 8.3E-140 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 Pfam PF13167 GTP-binding GTPase N-terminal 2 85 4.9E-29 T 21-04-2016 IPR025121 GTPase HflX, N-terminal APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 SUPERFAMILY SSF54980 343 396 1.51E-5 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 2 334 2.4E-143 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 241 259 1.9E-9 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 195 213 1.9E-9 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 174 194 1.9E-9 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 Pfam PF01926 50S ribosome-binding GTPase 174 292 8.9E-20 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 Pfam PF16360 GTP-binding GTPase Middle Region 87 166 1.4E-25 T 21-04-2016 IPR032305 GTP-binding protein, middle domain APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 Gene3D G3DSA:3.40.50.300 171 336 2.8E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 PANTHER PTHR10229 2 401 2.1E-156 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 APL_RS10395 092d7e1714ab8808125d2445318f4a7a 407 Hamap MF_00900 GTPase HflX [hflX]. 1 364 43.626 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PIRSF PIRSF000722 2 402 1.0E-139 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 Gene3D G3DSA:3.30.420.40 5 205 1.5E-11 T 21-04-2016 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 Pfam PF00871 Acetokinase family 5 395 1.4E-170 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PANTHER PTHR21060 2 400 1.3E-253 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 TIGRFAM TIGR00016 ackA: acetate kinase 1 401 7.3E-179 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 SUPERFAMILY SSF53067 158 400 1.1E-82 T 21-04-2016 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PANTHER PTHR21060:SF15 2 400 1.3E-253 T 21-04-2016 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 SUPERFAMILY SSF53067 5 197 6.04E-62 T 21-04-2016 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 Gene3D G3DSA:3.30.420.40 206 400 2.6E-72 T 21-04-2016 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 Hamap MF_00020 Acetate kinase [ackA]. 1 402 178.778 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 174 187 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 6 17 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 302 315 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 382 394 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS03375 a7c020dbf06d0bac4dacb83b0a076103 402 PRINTS PR00471 Acetate kinase family signature 326 342 1.2E-45 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APL_RS07760 3f193b28c6d34c629cdc20293eae9f42 472 PANTHER PTHR30576:SF4 17 472 6.4E-179 T 21-04-2016 APL_RS07760 3f193b28c6d34c629cdc20293eae9f42 472 Pfam PF02397 Bacterial sugar transferase 276 465 1.4E-56 T 21-04-2016 IPR003362 Bacterial sugar transferase APL_RS07760 3f193b28c6d34c629cdc20293eae9f42 472 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 14 472 2.3E-118 T 21-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APL_RS07760 3f193b28c6d34c629cdc20293eae9f42 472 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 11 472 1.8E-157 T 21-04-2016 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 APL_RS07760 3f193b28c6d34c629cdc20293eae9f42 472 PANTHER PTHR30576 17 472 6.4E-179 T 21-04-2016 APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 SUPERFAMILY SSF52218 2 167 1.78E-29 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 PANTHER PTHR38030 1 171 1.1E-75 T 21-04-2016 APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 Gene3D G3DSA:3.40.50.360 1 172 9.3E-21 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 Pfam PF12724 Flavodoxin domain 4 152 1.8E-49 T 21-04-2016 IPR026816 Flavodoxin domain APL_RS08450 c57d43fb3992ef122f460356c349e66b 175 PANTHER PTHR38030:SF2 1 171 1.1E-75 T 21-04-2016 APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 SUPERFAMILY SSF51556 1 249 8.7E-40 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 Pfam PF01026 TatD related DNase 2 247 1.4E-35 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 PANTHER PTHR10060 1 250 1.6E-33 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 PIRSF PIRSF005902 1 250 1.7E-39 T 21-04-2016 IPR001130 TatD family GO:0016788 APL_RS01440 cdace7017a3ba2c274751559f932b93d 250 Gene3D G3DSA:3.20.20.140 1 249 5.8E-41 T 21-04-2016 APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 PANTHER PTHR33930:SF2 1 112 5.1E-33 T 21-04-2016 APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 Gene3D G3DSA:1.20.1290.10 1 108 3.4E-32 T 21-04-2016 IPR029032 AhpD-like APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 PANTHER PTHR33930 1 112 5.1E-33 T 21-04-2016 APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 90 2.3E-18 T 21-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 5.0E-19 T 21-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS06735 3985edd4f9c4a5f0a9ce8fe0a0e54bd5 112 SUPERFAMILY SSF69118 2 107 1.31E-26 T 21-04-2016 IPR029032 AhpD-like APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PRINTS PR00315 GTP-binding elongation factor signature 11 24 9.1E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PRINTS PR00315 GTP-binding elongation factor signature 56 64 9.1E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PRINTS PR00315 GTP-binding elongation factor signature 128 137 9.1E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PRINTS PR00315 GTP-binding elongation factor signature 92 103 9.1E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PRINTS PR00315 GTP-binding elongation factor signature 76 86 9.1E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Gene3D G3DSA:3.30.70.870 309 404 1.1E-38 T 21-04-2016 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PANTHER PTHR23115 1 598 4.1E-299 T 21-04-2016 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Gene3D G3DSA:3.40.50.300 7 211 1.3E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 PANTHER PTHR23115:SF14 1 598 4.1E-299 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Gene3D G3DSA:2.40.30.10 212 308 4.1E-26 T 21-04-2016 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 SUPERFAMILY SSF54980 403 517 4.8E-27 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Pfam PF03144 Elongation factor Tu domain 2 224 294 3.8E-10 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 SUPERFAMILY SSF50447 156 304 9.94E-32 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Pfam PF00009 Elongation factor Tu GTP binding domain 8 200 8.0E-56 T 21-04-2016 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Gene3D G3DSA:3.30.70.240 405 483 4.2E-31 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 SUPERFAMILY SSF54980 307 392 1.22E-15 T 21-04-2016 IPR009022 Elongation factor G, III-V domain APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 SUPERFAMILY SSF52540 5 212 6.09E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 139 3.0E-24 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Pfam PF00679 Elongation factor G C-terminus 402 482 1.8E-22 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 Gene3D G3DSA:2.40.50.250 488 582 5.6E-40 T 21-04-2016 APL_RS00265 e958886f8cbe2e5bf4b0ffad41697a79 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 604 2.6E-290 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Pfam PF10415 Fumarase C C-terminus 408 461 3.4E-26 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.2E-36 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.2E-36 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.2E-36 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 4.2E-36 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PANTHER PTHR11444 1 461 3.1E-252 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 461 6.4E-247 T 21-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Gene3D G3DSA:1.20.200.10 139 416 1.3E-105 T 21-04-2016 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Gene3D G3DSA:1.10.40.30 417 461 2.6E-32 T 21-04-2016 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 SUPERFAMILY SSF48557 3 460 2.04E-158 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 462 91.515 T 21-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Pfam PF00206 Lyase 11 342 2.5E-111 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 PANTHER PTHR11444:SF1 1 461 3.1E-252 T 21-04-2016 APL_RS09345 49ebdd1078c15905b6cb8c8d2ad0cfd6 464 Gene3D G3DSA:1.10.275.10 1 138 3.9E-61 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Gene3D G3DSA:3.40.630.30 397 485 2.2E-7 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 SUPERFAMILY SSF52540 85 256 1.29E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Gene3D G3DSA:3.40.50.300 120 205 3.6E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Pfam PF17176 tRNA-binding domain 491 598 2.5E-25 T 21-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 PANTHER PTHR10925 24 600 2.4E-128 T 21-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 PANTHER PTHR10925:SF6 24 600 2.4E-128 T 21-04-2016 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 1 598 41.749 T 21-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Gene3D G3DSA:3.40.630.30 313 366 6.8E-6 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Pfam PF13718 GNAT acetyltransferase 2 320 429 1.6E-14 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Pfam PF13718 GNAT acetyltransferase 2 433 487 1.2E-10 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 Pfam PF05127 Helicase 159 306 2.7E-38 T 21-04-2016 IPR007807 Helicase domain APL_RS03625 d1913a25ca52e874939fe15f1bce74ed 600 SUPERFAMILY SSF55729 314 483 5.78E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 Gene3D G3DSA:3.40.250.10 27 147 7.0E-23 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 PANTHER PTHR12231:SF138 44 149 2.0E-35 T 21-04-2016 APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 Pfam PF00581 Rhodanese-like domain 49 140 6.9E-14 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 SUPERFAMILY SSF52821 20 145 5.5E-26 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 PANTHER PTHR12231 44 149 2.0E-35 T 21-04-2016 APL_RS07950 fa9a79fcfd1957de1e8bbb428d32a960 149 SMART SM00450 45 143 2.0E-12 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 PANTHER PTHR24220 1 334 9.3E-102 T 21-04-2016 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 SUPERFAMILY SSF52540 5 226 1.81E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 Pfam PF00005 ABC transporter 17 156 2.5E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 Pfam PF03459 TOBE domain 291 351 1.1E-15 T 21-04-2016 IPR005116 Transport-associated OB, type 1 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 Gene3D G3DSA:2.40.50.100 279 349 2.6E-15 T 21-04-2016 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 PANTHER PTHR24220:SF284 1 334 9.3E-102 T 21-04-2016 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 SMART SM00382 23 206 3.6E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 SUPERFAMILY SSF50331 245 350 5.95E-19 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 Gene3D G3DSA:3.40.50.300 17 224 1.8E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01350 5caa767e9d1efee1ab880347cb94a825 351 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 351 4.7E-131 T 21-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 APL_RS04340 3d2091fb447c38206084396e1b9a6586 1319 PANTHER PTHR36985 7 1315 4.5E-258 T 21-04-2016 APL_RS04340 3d2091fb447c38206084396e1b9a6586 1319 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 968 1314 4.4E-64 T 21-04-2016 IPR007452 Translocation and assembly module TamB APL_RS05560 af54ecf834f4ad0875388b0a5a4d7831 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 1.2E-69 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APL_RS05560 af54ecf834f4ad0875388b0a5a4d7831 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 5 184 8.8E-74 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APL_RS05560 af54ecf834f4ad0875388b0a5a4d7831 186 Gene3D G3DSA:3.40.30.10 44 178 9.2E-5 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 Gene3D G3DSA:3.10.105.10 294 482 4.3E-30 T 21-04-2016 APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 431 6.7E-34 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 Gene3D G3DSA:3.40.190.10 250 293 5.5E-4 T 21-04-2016 APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 PANTHER PTHR30290:SF10 1 505 1.7E-70 T 21-04-2016 APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 PANTHER PTHR30290 1 505 1.7E-70 T 21-04-2016 APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 Gene3D G3DSA:3.90.76.10 63 223 1.3E-29 T 21-04-2016 APL_RS05240 2d589ae1c5bd4912609df847bda0fd4e 516 SUPERFAMILY SSF53850 49 507 1.56E-73 T 21-04-2016 APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 SMART SM00382 26 212 1.0E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 SUPERFAMILY SSF52540 2 225 1.11E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 Gene3D G3DSA:3.40.50.300 1 230 9.2E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 Pfam PF00005 ABC transporter 18 162 6.4E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS09530 a637607ac50ab0967aea8870c280f07c 255 PANTHER PTHR24220 3 241 3.7E-63 T 21-04-2016 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 PANTHER PTHR21599:SF4 1 375 3.2E-189 T 21-04-2016 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 Gene3D G3DSA:3.90.1510.10 42 275 1.9E-92 T 21-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 PANTHER PTHR21599 1 375 3.2E-189 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.6E-159 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 PIRSF PIRSF006078 1 376 4.2E-137 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 Pfam PF02595 Glycerate kinase family 3 374 4.1E-148 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APL_RS00735 89b5a87f01382ee1a77df68f7d0b5f1a 377 SUPERFAMILY SSF110738 1 376 1.83E-141 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 Hamap MF_00187 Protein FdhD [fdhD]. 2 264 34.321 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 Pfam PF02634 FdhD/NarQ family 25 263 9.0E-72 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 Gene3D G3DSA:3.10.20.10 27 112 6.1E-31 T 21-04-2016 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 Gene3D G3DSA:3.40.140.10 134 264 9.1E-47 T 21-04-2016 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 263 9.4E-73 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 SUPERFAMILY SSF53927 4 263 2.23E-74 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 PANTHER PTHR30592:SF1 2 263 1.2E-100 T 21-04-2016 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 PIRSF PIRSF015626 1 267 1.7E-78 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 APL_RS04650 7cf6154b993503e62217fbce93e280aa 268 PANTHER PTHR30592 2 263 1.2E-100 T 21-04-2016 APL_RS08035 dd99e18ebeb7c5074ca71549a5810c6a 82 Gene3D G3DSA:1.10.150.250 3 80 1.7E-26 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase APL_RS08035 dd99e18ebeb7c5074ca71549a5810c6a 82 PANTHER PTHR39585:SF1 1 81 2.9E-22 T 21-04-2016 APL_RS08035 dd99e18ebeb7c5074ca71549a5810c6a 82 SUPERFAMILY SSF109910 3 78 4.58E-25 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase APL_RS08035 dd99e18ebeb7c5074ca71549a5810c6a 82 PANTHER PTHR39585 1 81 2.9E-22 T 21-04-2016 APL_RS08035 dd99e18ebeb7c5074ca71549a5810c6a 82 Pfam PF03937 Flavinator of succinate dehydrogenase 7 76 7.7E-23 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SUPERFAMILY SSF55021 776 841 1.6E-10 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SUPERFAMILY SSF81301 23 156 4.91E-15 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Pfam PF08335 GlnD PII-uridylyltransferase 161 298 2.0E-30 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Gene3D G3DSA:1.10.3210.10 405 594 4.3E-25 T 21-04-2016 IPR006674 HD domain APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Pfam PF01909 Nucleotidyltransferase domain 52 114 1.4E-4 T 21-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Pfam PF01966 HD domain 436 568 3.1E-11 T 21-04-2016 IPR006674 HD domain APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SMART SM00471 431 578 3.2E-10 T 21-04-2016 IPR003607 HD/PDEase domain APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 21 848 5.8E-275 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Gene3D G3DSA:3.30.460.10 56 149 5.2E-5 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 PANTHER PTHR13734:SF45 80 668 1.2E-118 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 PIRSF PIRSF006288 2 850 1.4E-274 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 PANTHER PTHR13734 80 668 1.2E-118 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 850 263.37 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 Gene3D G3DSA:3.30.70.260 776 834 1.6E-9 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SUPERFAMILY SSF81593 181 296 7.53E-7 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SUPERFAMILY SSF109604 404 525 1.46E-12 T 21-04-2016 APL_RS03140 4a95a5f00226b4c6a13de2d3731ec0ea 850 SUPERFAMILY SSF55021 670 749 3.24E-9 T 21-04-2016 APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 SUPERFAMILY SSF56300 13 221 1.71E-28 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 Gene3D G3DSA:3.60.21.10 183 219 9.5E-24 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 Gene3D G3DSA:3.60.21.10 12 135 9.5E-24 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 Pfam PF00149 Calcineurin-like phosphoesterase 13 208 2.2E-9 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 PANTHER PTHR34990 1 243 4.8E-108 T 21-04-2016 APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 111.295 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 PANTHER PTHR34990:SF1 1 243 4.8E-108 T 21-04-2016 APL_RS09605 992a5eb06bf8bb34c387e9af0f51d45a 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 14 239 6.1E-107 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APL_RS09235 8691975ea8727004188d10110ac3d205 381 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 204 220 1.3E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 Pfam PF14815 NUDIX domain 245 369 1.7E-20 T 21-04-2016 IPR029119 MutY, C-terminal APL_RS09235 8691975ea8727004188d10110ac3d205 381 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 180 2.2E-20 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 Gene3D G3DSA:3.90.79.10 241 372 1.7E-23 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS09235 8691975ea8727004188d10110ac3d205 381 SUPERFAMILY SSF48150 16 237 8.17E-76 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 SMART SM00525 203 223 1.3E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 PANTHER PTHR10359 20 319 1.5E-99 T 21-04-2016 APL_RS09235 8691975ea8727004188d10110ac3d205 381 ProSitePatterns PS01155 Endonuclease III family signature. 114 143 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 Gene3D G3DSA:1.10.1670.10 135 236 1.4E-39 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APL_RS09235 8691975ea8727004188d10110ac3d205 381 SUPERFAMILY SSF55811 232 371 1.12E-19 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS09235 8691975ea8727004188d10110ac3d205 381 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 18 287 4.2E-125 T 21-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APL_RS09235 8691975ea8727004188d10110ac3d205 381 Pfam PF00633 Helix-hairpin-helix motif 112 139 2.6E-6 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APL_RS09235 8691975ea8727004188d10110ac3d205 381 SMART SM00478 51 202 2.7E-48 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APL_RS09235 8691975ea8727004188d10110ac3d205 381 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 204 220 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APL_RS09235 8691975ea8727004188d10110ac3d205 381 Gene3D G3DSA:1.10.340.30 34 134 7.3E-43 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 SUPERFAMILY SSF103025 15 210 4.4E-48 T 21-04-2016 APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 Gene3D G3DSA:3.30.70.1400 23 107 6.9E-31 T 21-04-2016 APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 PANTHER PTHR22602 13 278 7.2E-49 T 21-04-2016 APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 PANTHER PTHR22602:SF0 13 278 7.2E-49 T 21-04-2016 APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 SUPERFAMILY SSF101790 212 292 9.81E-20 T 21-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 155 219 6.1E-22 T 21-04-2016 IPR017703 YgfZ/GcvT conserved site APL_RS00285 b55167b0796239ecef47b30d9fe830a8 295 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 125 9.9E-9 T 21-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APL_RS04770 0da816419b5a710073714562ee8e2f55 459 Gene3D G3DSA:1.20.120.640 307 392 3.8E-26 T 21-04-2016 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.42 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 1.1E-194 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 SUPERFAMILY SSF47323 316 458 9.42E-42 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 SUPERFAMILY SSF52374 1 309 5.63E-103 T 21-04-2016 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 Pfam PF09190 DALR domain 341 402 1.3E-24 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 7.1E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 7.1E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 7.1E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 7.1E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 PANTHER PTHR10890 1 457 5.9E-259 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 Gene3D G3DSA:3.40.50.620 18 305 1.9E-115 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS04770 0da816419b5a710073714562ee8e2f55 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 1.9E-141 T 21-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APL_RS04770 0da816419b5a710073714562ee8e2f55 459 SMART SM00840 341 402 1.4E-28 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APL_RS06840 c35d5eedb6133da5f88b60eec2d3291d 293 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 18 234 1.5E-36 T 21-04-2016 APL_RS06840 c35d5eedb6133da5f88b60eec2d3291d 293 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 12 252 26.696 T 21-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 APL_RS06840 c35d5eedb6133da5f88b60eec2d3291d 293 PANTHER PTHR37468 5 271 1.3E-90 T 21-04-2016 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 PANTHER PTHR11468:SF10 28 797 0.0 T 21-04-2016 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 SUPERFAMILY SSF53756 6 798 3.61E-274 T 21-04-2016 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 644 656 - T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 PANTHER PTHR11468 28 797 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 Pfam PF00343 Carbohydrate phosphorylase 93 798 2.2E-291 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 Gene3D G3DSA:3.40.50.2000 17 468 3.1E-165 T 21-04-2016 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 PIRSF PIRSF000460 13 799 4.3E-196 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 25 798 0.0 T 21-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS06435 9252ee324ebc6df1a9cd395bc45fad9a 799 Gene3D G3DSA:3.40.50.2000 469 784 2.6E-132 T 21-04-2016 APL_RS02545 571e5506fe3d762f6e216e2ab4232bd4 300 PANTHER PTHR38103 3 300 2.4E-110 T 21-04-2016 APL_RS02545 571e5506fe3d762f6e216e2ab4232bd4 300 Pfam PF04381 Putative exonuclease, RdgC 2 295 5.1E-106 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 APL_RS02545 571e5506fe3d762f6e216e2ab4232bd4 300 PANTHER PTHR38103:SF1 3 300 2.4E-110 T 21-04-2016 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PANTHER PTHR11728 3 336 4.0E-136 T 21-04-2016 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 Gene3D G3DSA:1.10.1040.10 189 331 1.9E-56 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 SUPERFAMILY SSF51735 9 183 1.08E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 324 9.7E-51 T 21-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 7 327 37.003 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PIRSF PIRSF000114 2 336 1.3E-98 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 Gene3D G3DSA:3.40.50.720 3 188 1.1E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 164 1.4E-51 T 21-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 SUPERFAMILY SSF48179 184 336 3.91E-56 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 11 28 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 4.8E-44 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS07960 42c35efcd3033a5c513b7338fe3c8b41 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APL_RS06000 ff7a675bc132e7453eca258feef8b843 544 PANTHER PTHR30563 32 541 9.7E-112 T 21-04-2016 APL_RS06000 ff7a675bc132e7453eca258feef8b843 544 Pfam PF02646 RmuC family 213 508 1.8E-96 T 21-04-2016 IPR003798 DNA recombination RmuC APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 1.3E-35 T 21-04-2016 IPR003736 Phenylacetic acid degradation-related domain APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 PANTHER PTHR12418 1 133 1.6E-40 T 21-04-2016 APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 SUPERFAMILY SSF54637 4 132 5.65E-29 T 21-04-2016 IPR029069 HotDog domain APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 Gene3D G3DSA:3.10.129.10 2 141 8.0E-44 T 21-04-2016 IPR029069 HotDog domain APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 PANTHER PTHR12418:SF33 1 133 1.6E-40 T 21-04-2016 APL_RS07520 0569ecbcb898353ba12a067a04e8fb14 141 Pfam PF03061 Thioesterase superfamily 51 129 1.4E-15 T 21-04-2016 IPR006683 Thioesterase domain APL_RS07370 b9c1974aad70ebcbcce84bc392340c47 278 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 277 4.8E-132 T 21-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APL_RS07370 b9c1974aad70ebcbcce84bc392340c47 278 PANTHER PTHR32502 1 278 1.3E-158 T 21-04-2016 APL_RS07370 b9c1974aad70ebcbcce84bc392340c47 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 276 2.5E-109 T 21-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APL_RS07370 b9c1974aad70ebcbcce84bc392340c47 278 PANTHER PTHR32502:SF9 1 278 1.3E-158 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 379 6.2E-203 T 21-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 Gene3D G3DSA:3.40.50.1970 4 185 6.5E-59 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 Gene3D G3DSA:1.20.1090.10 186 383 1.8E-71 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 PANTHER PTHR11496 1 383 1.5E-178 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 SUPERFAMILY SSF56796 10 381 2.62E-122 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 PANTHER PTHR11496:SF77 1 383 1.5E-178 T 21-04-2016 APL_RS08965 a8dfb3af9c9bfccfd1342c1502301747 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 1.1E-119 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APL_RS10645 84f06e563022467774a95facd439eade 209 Gene3D G3DSA:2.30.110.10 9 209 3.4E-80 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 PANTHER PTHR10851:SF0 1 209 1.7E-104 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 209 38.505 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 179 192 - T 21-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 116 3.0E-21 T 21-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 PIRSF PIRSF000190 1 209 1.9E-76 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 SUPERFAMILY SSF50475 6 209 7.3E-63 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 169 209 2.6E-19 T 21-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 209 1.8E-91 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS10645 84f06e563022467774a95facd439eade 209 PANTHER PTHR10851 1 209 1.7E-104 T 21-04-2016 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 ProSitePatterns PS00761 Signal peptidases I signature 3. 263 276 - T 21-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 ProSitePatterns PS00760 Signal peptidases I lysine active site. 170 182 - T 21-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 120 7.4E-26 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 258 277 7.4E-26 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 168 180 7.4E-26 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PANTHER PTHR12383:SF27 240 300 5.8E-89 T 21-04-2016 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PANTHER PTHR12383:SF27 27 216 5.8E-89 T 21-04-2016 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 Pfam PF00717 Peptidase S24-like 110 185 1.8E-19 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 Gene3D G3DSA:2.10.109.10 100 178 3.7E-56 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 Gene3D G3DSA:2.10.109.10 258 301 3.7E-56 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 89 298 1.6E-46 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 SUPERFAMILY SSF51306 102 317 3.92E-73 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 Pfam PF10502 Signal peptidase, peptidase S26 255 295 4.4E-6 T 21-04-2016 IPR019533 Peptidase S26 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PANTHER PTHR12383 240 300 5.8E-89 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 PANTHER PTHR12383 27 216 5.8E-89 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 ProSitePatterns PS00501 Signal peptidases I serine active site. 113 120 - T 21-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APL_RS02855 57909fd4ff3719a85871b5da8aee6d7b 319 Gene3D G3DSA:2.170.230.10 179 257 1.5E-21 T 21-04-2016 IPR019766 Peptidase S26A, all-beta subdomain APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 Gene3D G3DSA:1.20.5.570 455 487 2.3E-19 T 21-04-2016 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 Gene3D G3DSA:3.40.1670.10 337 454 2.3E-54 T 21-04-2016 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 PANTHER PTHR30108 1 487 2.0E-262 T 21-04-2016 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 SUPERFAMILY SSF50475 3 322 7.45E-124 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 7.5E-173 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 71.153 T 21-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 8.6E-168 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 SUPERFAMILY SSF143968 323 487 2.62E-67 T 21-04-2016 APL_RS07600 b00ebc5eb2e0f7ec5535ddc09029bdc6 487 PANTHER PTHR30108:SF1 1 487 2.0E-262 T 21-04-2016 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 PANTHER PTHR37839:SF1 1 449 1.8E-216 T 21-04-2016 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 Gene3D G3DSA:2.40.50.100 43 80 6.4E-4 T 21-04-2016 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 260 1.7E-116 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 PANTHER PTHR37839 1 449 1.8E-216 T 21-04-2016 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 449 5.5E-197 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 Pfam PF11973 NQRA C-terminal domain 265 313 3.4E-23 T 21-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 APL_RS00775 13c97ecc9a613d6b422bb4bd00eb26ca 449 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 449 46.339 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APL_RS01905 770a713632139771a73b203139190de5 1202 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 451 3.2E-62 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 1 1202 13.68 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070 1 80 4.5E-261 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070 114 207 4.5E-261 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070 310 501 4.5E-261 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070 807 1197 4.5E-261 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070 519 785 4.5E-261 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01905 770a713632139771a73b203139190de5 1202 Pfam PF12705 PD-(D/E)XK nuclease superfamily 973 1175 6.3E-7 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.90.320.10 900 1202 9.9E-83 T 21-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.40.50.300 464 589 4.9E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.40.50.300 738 888 4.9E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52980 962 1201 3.7E-72 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52980 911 922 3.7E-72 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS01905 770a713632139771a73b203139190de5 1202 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1201 3.7E-301 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.40.50.300 363 463 3.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.40.50.300 116 146 3.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:3.40.50.300 9 73 3.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 457 830 1.4E-19 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52540 10 71 3.12E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52540 114 198 3.12E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52540 337 514 3.12E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 SUPERFAMILY SSF52540 554 834 3.12E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:1.10.3170.10 151 360 1.1E-41 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070:SF23 1 80 4.5E-261 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070:SF23 114 207 4.5E-261 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070:SF23 310 501 4.5E-261 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070:SF23 807 1197 4.5E-261 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 PANTHER PTHR11070:SF23 519 785 4.5E-261 T 21-04-2016 APL_RS01905 770a713632139771a73b203139190de5 1202 Gene3D G3DSA:1.10.486.10 593 737 9.2E-47 T 21-04-2016 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 88 102 - T 21-04-2016 IPR028871 Blue (type 1) copper protein, binding site APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00156 Type I copper blue protein family signature 86 100 7.5E-5 T 21-04-2016 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00156 Type I copper blue protein family signature 42 55 7.5E-5 T 21-04-2016 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 TIGRFAM TIGR02375 pseudoazurin: pseudoazurin 25 137 5.6E-35 T 21-04-2016 IPR012745 Pseudoazurin GO:0005507 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 Gene3D G3DSA:2.60.40.420 20 142 2.6E-38 T 21-04-2016 IPR008972 Cupredoxin APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 SUPERFAMILY SSF49503 20 124 1.18E-27 T 21-04-2016 IPR008972 Cupredoxin APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 25 108 1.9E-12 T 21-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00155 Amicyanin family signature 36 55 6.1E-22 T 21-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00155 Amicyanin family signature 91 106 6.1E-22 T 21-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00155 Amicyanin family signature 75 90 6.1E-22 T 21-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 APL_RS09535 9ee28d14d6619bed3972851a1f3716ee 143 PRINTS PR00155 Amicyanin family signature 20 35 6.1E-22 T 21-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 TIGRFAM TIGR00260 thrC: threonine synthase 50 396 3.4E-122 T 21-04-2016 IPR004450 Threonine synthase-like APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Pfam PF14821 Threonine synthase N terminus 10 78 5.0E-8 T 21-04-2016 IPR029144 Threonine synthase, N-terminal APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 367 2.8E-24 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Gene3D G3DSA:3.90.1380.10 1 82 1.9E-17 T 21-04-2016 IPR029144 Threonine synthase, N-terminal APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 PANTHER PTHR10314:SF1 25 424 2.5E-138 T 21-04-2016 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Gene3D G3DSA:3.40.50.1100 104 192 5.4E-12 T 21-04-2016 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 PANTHER PTHR10314 25 424 2.5E-138 T 21-04-2016 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 SUPERFAMILY SSF53686 1 423 1.57E-130 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Gene3D G3DSA:3.40.50.1100 323 399 5.5E-16 T 21-04-2016 APL_RS07905 a05e3cd5f6f00dc863b5f3fa89602850 426 Gene3D G3DSA:3.40.50.1100 193 317 6.7E-51 T 21-04-2016 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 19 228 26.725 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 26 228 2.6E-83 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 PANTHER PTHR30586:SF0 18 228 4.6E-128 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 Pfam PF02508 Rnf-Nqr subunit, membrane protein 25 218 8.2E-65 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 PIRSF PIRSF006102 21 228 1.5E-74 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00880 36f2327d783d4cd3de04fc1197112739 228 PANTHER PTHR30586 18 228 4.6E-128 T 21-04-2016 APL_RS06190 8ddd6a21da6c00f21d519cbe4ee6a78f 466 SUPERFAMILY SSF52467 15 207 1.59E-10 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS06190 8ddd6a21da6c00f21d519cbe4ee6a78f 466 Pfam PF13289 SIR2-like domain 104 231 1.3E-27 T 21-04-2016 APL_RS06190 8ddd6a21da6c00f21d519cbe4ee6a78f 466 Gene3D G3DSA:3.40.50.1220 90 244 1.6E-4 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS06190 8ddd6a21da6c00f21d519cbe4ee6a78f 466 Gene3D G3DSA:3.40.50.1220 15 32 1.6E-4 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 193 5.7E-74 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.4E-49 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 PANTHER PTHR30309 1 196 2.1E-81 T 21-04-2016 APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 PANTHER PTHR30309:SF0 1 196 2.1E-81 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 SMART SM01207 10 185 1.6E-82 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APL_RS07060 c4cd27437ad8c773b2ac265d7ff627ec 196 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.699 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 PANTHER PTHR24220:SF388 9 392 4.5E-176 T 21-04-2016 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 SMART SM00382 32 220 1.1E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 SMART SM00382 297 488 1.7E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 Gene3D G3DSA:3.40.50.300 2 236 1.5E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 Gene3D G3DSA:3.40.50.300 267 496 3.3E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 PANTHER PTHR24220 9 392 4.5E-176 T 21-04-2016 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 Pfam PF12698 ABC-2 family transporter protein 566 905 1.3E-42 T 21-04-2016 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 Pfam PF00005 ABC transporter 288 432 6.6E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 Pfam PF00005 ABC transporter 23 170 1.1E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 SUPERFAMILY SSF52540 271 492 2.27E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04390 dbe5a3cbb2f6c93345fc268322aab36e 913 SUPERFAMILY SSF52540 7 236 2.2E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06330 b0ca0617ed560cafe84dd779183ecdfc 280 PANTHER PTHR30348 3 268 4.0E-51 T 21-04-2016 APL_RS06330 b0ca0617ed560cafe84dd779183ecdfc 280 PANTHER PTHR30348:SF4 3 268 4.0E-51 T 21-04-2016 APL_RS06330 b0ca0617ed560cafe84dd779183ecdfc 280 SUPERFAMILY SSF117396 5 258 3.27E-66 T 21-04-2016 IPR002763 Protein of unknown function DUF72 APL_RS06330 b0ca0617ed560cafe84dd779183ecdfc 280 Gene3D G3DSA:3.20.20.410 2 259 4.3E-68 T 21-04-2016 IPR002763 Protein of unknown function DUF72 APL_RS06330 b0ca0617ed560cafe84dd779183ecdfc 280 Pfam PF01904 Protein of unknown function DUF72 23 255 1.7E-45 T 21-04-2016 IPR002763 Protein of unknown function DUF72 APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 8.4E-31 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.307 T 21-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 Gene3D G3DSA:3.100.10.10 32 143 1.2E-26 T 21-04-2016 APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 21-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 PANTHER PTHR12934 1 144 4.2E-71 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 SUPERFAMILY SSF52080 4 143 3.53E-46 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P APL_RS09455 57c8c9010cafcaa3aec305c48eb9e849 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.4E-52 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Gene3D G3DSA:3.40.1060.10 166 280 4.0E-41 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Gene3D G3DSA:3.30.499.10 2 158 5.7E-21 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PANTHER PTHR11670:SF38 1 307 6.9E-270 T 21-04-2016 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PANTHER PTHR11670:SF38 327 467 6.9E-270 T 21-04-2016 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PANTHER PTHR11670 1 307 6.9E-270 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PANTHER PTHR11670 327 467 6.9E-270 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Gene3D G3DSA:3.30.499.10 335 467 1.3E-61 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Gene3D G3DSA:3.30.499.10 300 303 1.3E-61 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 3.0E-152 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 133 148 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 209 222 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 343 354 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 195 208 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 82 95 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 119 132 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 400 413 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 108 116 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 PRINTS PR00415 Aconitase family signature 286 300 5.4E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 59.34 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 466 1.4E-275 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 SUPERFAMILY SSF53732 2 467 5.62E-166 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS00720 30ad050e6b82ec3bf7a63874619fc2da 469 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SUPERFAMILY SSF50249 645 724 3.37E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Pfam PF08206 Ribonuclease B OB domain 87 146 3.1E-23 T 21-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SUPERFAMILY SSF50249 222 643 2.14E-142 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 PANTHER PTHR23355:SF9 4 745 3.5E-283 T 21-04-2016 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 3.4E-8 T 21-04-2016 IPR013668 Ribonuclease R winged-helix domain APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Pfam PF00575 S1 RNA binding domain 644 723 9.9E-14 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Gene3D G3DSA:2.40.50.140 645 724 1.1E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SMART SM00357 86 147 2.3E-11 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.724 T 21-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 Pfam PF00773 RNB domain 262 588 5.5E-107 T 21-04-2016 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 5.1E-269 T 21-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 21-04-2016 IPR022966 Ribonuclease II/R, conserved site APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 1.1E-260 T 21-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SMART SM00955 262 589 6.7E-183 T 21-04-2016 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SUPERFAMILY SSF50249 142 237 1.87E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SUPERFAMILY SSF50249 67 148 9.47E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 SMART SM00316 643 725 2.4E-10 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS07795 dccf394122ad528d5afd264190dd44cd 785 PANTHER PTHR23355 4 745 3.5E-283 T 21-04-2016 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 PRINTS PR01755 Bacterial translocase SecF protein signature 47 62 1.0E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.0E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.0E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.0E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 Pfam PF07549 SecD/SecF GG Motif 42 69 2.0E-12 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 48 292 1.0E-82 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 SUPERFAMILY SSF82866 83 293 2.88E-34 T 21-04-2016 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 Pfam PF02355 Protein export membrane protein 120 300 3.7E-66 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 PANTHER PTHR30081 18 323 6.8E-79 T 21-04-2016 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 Gene3D G3DSA:1.20.1640.10 136 297 2.9E-23 T 21-04-2016 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 20 303 27.143 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APL_RS05575 915ccc128667fa99732ce6df0accf4d8 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 289 2.8E-52 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 953 988 9.2E-16 T 21-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 SUPERFAMILY SSF50249 37 121 1.53E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 6.3E-172 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 Hamap MF_00970 Ribonuclease E [rne]. 1 977 34.085 T 21-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 SMART SM00316 34 116 4.0E-12 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 Pfam PF00575 S1 RNA binding domain 33 115 6.9E-15 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 Gene3D G3DSA:2.40.50.140 28 121 1.0E-35 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 PANTHER PTHR30001 1 856 0.0 T 21-04-2016 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 PANTHER PTHR30001:SF1 1 856 0.0 T 21-04-2016 APL_RS07585 2b8cdfe9c0b619c979b7bf1087943358 992 Pfam PF10150 Ribonuclease E/G family 118 387 9.6E-95 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 2.3E-20 T 21-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 PANTHER PTHR22981 6 286 3.1E-81 T 21-04-2016 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 163 2.8E-37 T 21-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 SUPERFAMILY SSF48179 164 286 1.13E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 Gene3D G3DSA:3.40.50.720 6 164 1.2E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 PIRSF PIRSF000103 1 288 6.0E-78 T 21-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 SUPERFAMILY SSF51735 6 165 7.89E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06260 f9936d0ec2fa677b62dfbdaf11c30d91 288 Gene3D G3DSA:1.10.1040.10 165 287 2.7E-29 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS01125 47405d630b82466e5d9346439fa79109 224 Gene3D G3DSA:3.40.50.10070 66 142 1.3E-6 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APL_RS01125 47405d630b82466e5d9346439fa79109 224 PANTHER PTHR41164:SF1 1 223 9.3E-58 T 21-04-2016 APL_RS01125 47405d630b82466e5d9346439fa79109 224 PANTHER PTHR41164 1 223 9.3E-58 T 21-04-2016 APL_RS01125 47405d630b82466e5d9346439fa79109 224 SUPERFAMILY SSF52964 64 145 1.44E-8 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APL_RS01125 47405d630b82466e5d9346439fa79109 224 Pfam PF03783 Curli production assembly/transport component CsgG 45 220 4.9E-32 T 21-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 149 5.0E-65 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 89 100 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 114 132 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 154 167 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 170 183 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 198 207 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 135 151 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 317 1.5E-174 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 PANTHER PTHR22855 1 317 4.5E-131 T 21-04-2016 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 Gene3D G3DSA:3.90.226.10 61 275 2.8E-51 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 317 51.245 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS07840 b92a98a234acecbb4d6fc18d7c33c6ab 317 SUPERFAMILY SSF52096 5 316 1.59E-103 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 Pfam PF00005 ABC transporter 17 164 6.4E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 PANTHER PTHR24220 3 239 7.5E-105 T 21-04-2016 APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 SUPERFAMILY SSF52540 1 227 8.65E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 Gene3D G3DSA:3.40.50.300 1 227 6.8E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 SMART SM00382 26 213 4.1E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS03735 7707af062e3661ccbd6dcbe7ba30a2e5 252 PANTHER PTHR24220:SF471 3 239 7.5E-105 T 21-04-2016 APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 12 252 8.1E-84 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 PANTHER PTHR10992 11 254 6.4E-45 T 21-04-2016 APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 PANTHER PTHR10992:SF698 11 254 6.4E-45 T 21-04-2016 APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 Pfam PF00561 alpha/beta hydrolase fold 13 241 5.2E-16 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 Gene3D G3DSA:3.40.50.1820 6 253 3.3E-57 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 SUPERFAMILY SSF53474 3 253 2.77E-40 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS09305 c4649c29f26eca1ed7aebc535c9adfe3 254 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 7 253 33.645 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS10330 0512b02bf9574f46a0c9af73eb92fe62 94 PANTHER PTHR11675 1 92 5.4E-14 T 21-04-2016 APL_RS10330 0512b02bf9574f46a0c9af73eb92fe62 94 Pfam PF00652 Ricin-type beta-trefoil lectin domain 1 92 3.4E-20 T 21-04-2016 IPR000772 Ricin B, lectin domain APL_RS10330 0512b02bf9574f46a0c9af73eb92fe62 94 SMART SM00458 1 94 3.1E-4 T 21-04-2016 IPR000772 Ricin B, lectin domain APL_RS10330 0512b02bf9574f46a0c9af73eb92fe62 94 Gene3D G3DSA:2.80.10.50 2 92 2.4E-23 T 21-04-2016 APL_RS10330 0512b02bf9574f46a0c9af73eb92fe62 94 SUPERFAMILY SSF50370 1 93 6.44E-26 T 21-04-2016 IPR000772 Ricin B, lectin domain APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 171 1.5E-53 T 21-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 21-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 Gene3D G3DSA:1.10.1040.10 183 435 4.3E-112 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 Gene3D G3DSA:1.20.5.320 437 483 4.3E-26 T 21-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 SUPERFAMILY SSF48179 179 474 2.09E-127 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 470 2.0E-122 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 SMART SM01350 181 471 1.4E-211 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 2.0E-83 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PIRSF PIRSF000109 1 479 1.1E-248 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 Gene3D G3DSA:3.40.50.720 5 182 3.8E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 471 6.5E-239 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 SUPERFAMILY SSF51735 6 176 1.97E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06850 844e5583328469e1b22f212dd3d6d440 484 PANTHER PTHR11811 1 484 2.3E-298 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 5 317 7.0E-104 T 21-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 SUPERFAMILY SSF144083 252 315 8.37E-21 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 PANTHER PTHR21535 1 317 2.1E-142 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 Gene3D G3DSA:1.20.58.340 241 317 7.6E-28 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 PANTHER PTHR21535:SF37 1 317 2.1E-142 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 SUPERFAMILY SSF143865 1 256 1.57E-35 T 21-04-2016 APL_RS10505 dc8106f10b48b5429a89a00d9f70e305 317 Pfam PF01544 CorA-like Mg2+ transporter protein 25 313 4.0E-57 T 21-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APL_RS08030 9b2bdfea4fb977dcc3c50f404321c577 314 PANTHER PTHR30426 1 310 4.4E-161 T 21-04-2016 APL_RS08030 9b2bdfea4fb977dcc3c50f404321c577 314 Pfam PF02401 LytB protein 3 282 5.2E-92 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APL_RS08030 9b2bdfea4fb977dcc3c50f404321c577 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.3E-101 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APL_RS08030 9b2bdfea4fb977dcc3c50f404321c577 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.872 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APL_RS09220 01a8a18028d98ab28a5883425d596115 173 PANTHER PTHR32194 1 172 2.1E-101 T 21-04-2016 APL_RS09220 01a8a18028d98ab28a5883425d596115 173 Pfam PF00227 Proteasome subunit 2 171 3.7E-23 T 21-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 APL_RS09220 01a8a18028d98ab28a5883425d596115 173 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 173 40.409 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APL_RS09220 01a8a18028d98ab28a5883425d596115 173 SUPERFAMILY SSF56235 1 173 6.31E-55 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS09220 01a8a18028d98ab28a5883425d596115 173 Gene3D G3DSA:3.60.20.10 2 173 4.3E-76 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS09220 01a8a18028d98ab28a5883425d596115 173 PIRSF PIRSF039093 1 173 3.1E-78 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APL_RS09220 01a8a18028d98ab28a5883425d596115 173 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 173 9.4E-80 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APL_RS06405 f171245e73322da1d2cb3d177211b919 262 Pfam PF00872 Transposase, Mutator family 71 167 4.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS06495 f171245e73322da1d2cb3d177211b919 262 Pfam PF00872 Transposase, Mutator family 71 167 4.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS07565 20f2d52af271e79bb873cb6b4f0337dc 191 PANTHER PTHR10204:SF40 1 168 1.1E-62 T 21-04-2016 APL_RS07565 20f2d52af271e79bb873cb6b4f0337dc 191 SUPERFAMILY SSF52218 1 189 1.06E-51 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS07565 20f2d52af271e79bb873cb6b4f0337dc 191 Gene3D G3DSA:3.40.50.360 1 189 1.9E-52 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS07565 20f2d52af271e79bb873cb6b4f0337dc 191 Pfam PF02525 Flavodoxin-like fold 1 185 1.1E-46 T 21-04-2016 IPR003680 Flavodoxin-like fold APL_RS07565 20f2d52af271e79bb873cb6b4f0337dc 191 PANTHER PTHR10204 1 168 1.1E-62 T 21-04-2016 APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.843 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.4E-24 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 3.4E-19 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 SUPERFAMILY SSF55129 3 59 1.44E-20 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 PANTHER PTHR15892 1 59 3.7E-27 T 21-04-2016 APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 Gene3D G3DSA:3.30.1390.20 2 59 6.2E-29 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 PIRSF PIRSF002211 1 59 2.9E-27 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APL_RS09450 042a21adc452879dedff67d03e5ab2b6 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 21-04-2016 IPR018038 Ribosomal protein L30, conserved site APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 PANTHER PTHR30146 8 320 6.4E-139 T 21-04-2016 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Gene3D G3DSA:1.10.10.60 338 388 5.6E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Gene3D G3DSA:3.40.50.2300 57 110 9.3E-6 T 21-04-2016 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Gene3D G3DSA:3.40.50.2300 111 277 8.2E-29 T 21-04-2016 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 SUPERFAMILY SSF53822 12 299 7.36E-51 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Pfam PF12833 Helix-turn-helix domain 309 385 2.1E-16 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Pfam PF13377 Periplasmic binding protein-like domain 113 277 1.8E-35 T 21-04-2016 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 Gene3D G3DSA:1.10.10.60 284 336 3.2E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 PANTHER PTHR30146:SF24 8 320 6.4E-139 T 21-04-2016 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 SMART SM00342 301 384 3.8E-24 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APL_RS10155 b4c19aa24049b668ce27ee94e3296a72 393 SUPERFAMILY SSF46689 338 388 2.15E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 Pfam PF07690 Major Facilitator Superfamily 35 323 4.3E-39 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 PANTHER PTHR23508:SF15 11 235 8.3E-89 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 PANTHER PTHR23508:SF15 251 434 8.3E-89 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 PANTHER PTHR23508 11 235 8.3E-89 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 PANTHER PTHR23508 251 434 8.3E-89 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 SUPERFAMILY SSF103473 16 435 3.14E-74 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 Gene3D G3DSA:1.20.1250.20 24 205 2.3E-33 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 Gene3D G3DSA:1.20.1250.20 258 435 2.5E-22 T 21-04-2016 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APL_RS06865 0e9f166cf4de4f7ba16f388d77bc7e6c 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.508 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 PANTHER PTHR18804:SF11 1 40 1.5E-19 T 21-04-2016 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 PANTHER PTHR18804 1 40 1.5E-19 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 1.4E-8 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 Pfam PF00444 Ribosomal protein L36 1 40 3.7E-17 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 SUPERFAMILY SSF57840 1 40 1.02E-13 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09685 d8f25f7f4ec9e6460e6f1c45e5e1ed7b 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 40 0.004 T 21-04-2016 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 496 2.7E-45 T 21-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Gene3D G3DSA:1.10.1040.10 628 704 1.5E-10 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Gene3D G3DSA:3.40.50.720 312 500 1.2E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Gene3D G3DSA:1.10.1040.10 501 593 8.1E-20 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 SUPERFAMILY SSF48179 498 596 1.96E-22 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 SUPERFAMILY SSF52096 8 308 1.32E-47 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 496 521 - T 21-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 PANTHER PTHR23309 11 705 2.6E-194 T 21-04-2016 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 SUPERFAMILY SSF51735 316 496 3.02E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 PANTHER PTHR23309:SF6 11 705 2.6E-194 T 21-04-2016 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Gene3D G3DSA:3.90.226.10 5 205 7.0E-45 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 592 2.4E-17 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 206 3.3E-28 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APL_RS04635 2f0366bb044ddb3b256d364fbf68ccf2 705 SUPERFAMILY SSF48179 620 703 5.1E-16 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.2E-18 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 Gene3D G3DSA:3.40.50.300 2 255 1.9E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 PANTHER PTHR24220:SF576 5 321 1.2E-207 T 21-04-2016 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 SUPERFAMILY SSF52540 3 253 4.8E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 PANTHER PTHR24220 5 321 1.2E-207 T 21-04-2016 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 1.0E-25 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 Pfam PF00005 ABC transporter 24 181 2.2E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00360 60a6c9644003ffcffb1112f39d3f6249 328 SMART SM00382 32 239 1.2E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 286 389 1.5E-17 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 SUPERFAMILY SSF50621 257 414 1.57E-50 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 3.0E-29 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 3.0E-29 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 3.0E-29 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.0E-29 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 21-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 282 1.4E-78 T 21-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PANTHER PTHR11482:SF5 1 416 3.5E-174 T 21-04-2016 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 Gene3D G3DSA:3.20.20.10 36 267 6.0E-84 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 41.371 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PANTHER PTHR11482 1 416 3.5E-174 T 21-04-2016 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 3.7E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 3.7E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 3.7E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 3.7E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 3.7E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 Gene3D G3DSA:2.40.37.10 268 414 1.1E-47 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 21-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 412 8.0E-166 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APL_RS08055 7d201858656f29150e3667ba28ff5d48 416 SUPERFAMILY SSF51419 26 283 2.04E-82 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS00055 b8eafaa28d31cffa0f7100739d6e5923 104 PANTHER PTHR37479 1 104 8.7E-19 T 21-04-2016 APL_RS00055 b8eafaa28d31cffa0f7100739d6e5923 104 Pfam PF04999 Cell division protein FtsL 9 103 6.7E-29 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APL_RS00055 b8eafaa28d31cffa0f7100739d6e5923 104 PANTHER PTHR37479:SF1 1 104 8.7E-19 T 21-04-2016 APL_RS00055 b8eafaa28d31cffa0f7100739d6e5923 104 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 102 13.755 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APL_RS00055 b8eafaa28d31cffa0f7100739d6e5923 104 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 101 1.4E-16 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 449 4.5E-176 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 SUPERFAMILY SSF56112 94 162 3.86E-43 T 21-04-2016 IPR011009 Protein kinase-like domain APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 SUPERFAMILY SSF56112 197 439 3.86E-43 T 21-04-2016 IPR011009 Protein kinase-like domain APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 55.773 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 PANTHER PTHR10566 7 445 5.5E-266 T 21-04-2016 APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 PANTHER PTHR10566:SF79 7 445 5.5E-266 T 21-04-2016 APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 Pfam PF03109 ABC1 family 112 235 9.9E-32 T 21-04-2016 IPR004147 UbiB domain APL_RS10520 13b107d2e46cd43e949d47eeb925bf95 544 Gene3D G3DSA:3.90.1200.10 255 302 3.7E-4 T 21-04-2016 APL_RS04810 5b04bbd8d7b04d2193922327a6581fed 471 SUPERFAMILY SSF48452 60 153 1.2E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS04810 5b04bbd8d7b04d2193922327a6581fed 471 Pfam PF04575 Protein of unknown function (DUF560) 180 471 2.9E-104 T 21-04-2016 IPR007655 Protein of unknown function DUF560 APL_RS04810 5b04bbd8d7b04d2193922327a6581fed 471 Gene3D G3DSA:1.25.40.10 71 177 3.9E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 Pfam PF00437 Type II/IV secretion system protein 73 348 6.8E-81 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 Gene3D G3DSA:3.30.450.90 70 166 1.3E-35 T 21-04-2016 APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 Gene3D G3DSA:3.40.50.300 172 422 7.7E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 PANTHER PTHR30258 10 411 1.9E-125 T 21-04-2016 APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 SUPERFAMILY SSF52540 57 380 4.2E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02905 2a2604bd122a451db1ef2c3c58eaf1fc 425 PANTHER PTHR30258:SF3 10 411 1.9E-125 T 21-04-2016 APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 PANTHER PTHR33279:SF5 1 78 5.4E-47 T 21-04-2016 APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 PANTHER PTHR33279 1 78 5.4E-47 T 21-04-2016 APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 21-04-2016 IPR001455 TusA-like domain APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 Gene3D G3DSA:3.30.110.40 2 78 2.0E-31 T 21-04-2016 IPR001455 TusA-like domain APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-25 T 21-04-2016 IPR001455 TusA-like domain APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 79 29.513 T 21-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 APL_RS00485 c83490a461c80adc93a518dad752c5b4 79 SUPERFAMILY SSF64307 1 78 4.71E-28 T 21-04-2016 IPR001455 TusA-like domain APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 SUPERFAMILY SSF81345 337 649 3.27E-63 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 Gene3D G3DSA:1.10.3470.10 335 649 2.3E-72 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 PANTHER PTHR30472:SF16 241 649 3.3E-100 T 21-04-2016 APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 SUPERFAMILY SSF81345 12 320 5.1E-56 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 PANTHER PTHR30472 241 649 3.3E-100 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 Gene3D G3DSA:1.10.3470.10 8 322 1.5E-64 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 Pfam PF01032 FecCD transport family 354 649 2.7E-73 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS10675 a1325b387433dc09b9bf76a32fd1789a 650 Pfam PF01032 FecCD transport family 16 321 3.6E-70 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 SMART SM00382 30 204 2.2E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 PANTHER PTHR24220 3 207 4.6E-66 T 21-04-2016 APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 SUPERFAMILY SSF52540 2 213 1.03E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 Gene3D G3DSA:3.40.50.300 2 210 5.2E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 PANTHER PTHR24220:SF117 3 207 4.6E-66 T 21-04-2016 APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS08420 578c44701c432091cb9b1b365fc0c25e 216 Pfam PF00005 ABC transporter 21 149 1.7E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS09915 32d6ce988e6a279556373c783af49d45 262 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 76 159 1.5E-12 T 21-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif APL_RS09915 32d6ce988e6a279556373c783af49d45 262 SUPERFAMILY SSF53448 20 246 6.56E-16 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS09915 32d6ce988e6a279556373c783af49d45 262 PANTHER PTHR32385 20 218 1.1E-19 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 Gene3D G3DSA:3.30.70.20 125 152 2.4E-17 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 Gene3D G3DSA:3.30.70.20 41 69 6.9E-13 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 Gene3D G3DSA:3.30.70.20 103 124 6.9E-13 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 Gene3D G3DSA:3.30.70.20 153 217 1.9E-15 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 PANTHER PTHR11938 33 73 7.1E-73 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 PANTHER PTHR11938 99 205 7.1E-73 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 SUPERFAMILY SSF54862 37 334 3.85E-71 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 PANTHER PTHR11938:SF68 33 73 7.1E-73 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 PANTHER PTHR11938:SF68 99 205 7.1E-73 T 21-04-2016 APL_RS06985 d59589f38d4cfc8966d64d49fc961a02 345 Pfam PF13247 4Fe-4S dicluster domain 105 206 3.2E-23 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS03615 fadd192367c1ac2155b24e889d24126c 151 PANTHER PTHR23404 6 151 9.6E-41 T 21-04-2016 APL_RS03615 fadd192367c1ac2155b24e889d24126c 151 Gene3D G3DSA:3.90.1170.40 3 150 8.9E-55 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03615 fadd192367c1ac2155b24e889d24126c 151 PANTHER PTHR23404:SF2 6 151 9.6E-41 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03615 fadd192367c1ac2155b24e889d24126c 151 SUPERFAMILY SSF54690 4 150 6.02E-53 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS03615 fadd192367c1ac2155b24e889d24126c 151 Pfam PF02391 MoaE protein 8 121 2.0E-36 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 Gene3D G3DSA:3.20.20.70 1 332 1.7E-122 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 76 95 - T 21-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 SUPERFAMILY SSF51395 1 332 2.09E-100 T 21-04-2016 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 Pfam PF01180 Dihydroorotate dehydrogenase 43 333 2.6E-85 T 21-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 332 48.687 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 PANTHER PTHR11938 5 331 3.3E-93 T 21-04-2016 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 PIRSF PIRSF000164 8 335 3.0E-89 T 21-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APL_RS04050 66edabb7b9b4c10c602a35c32523ca60 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 333 1.2E-139 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Gene3D G3DSA:3.40.50.2030 380 546 2.0E-64 T 21-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 PANTHER PTHR30109 1 551 4.3E-275 T 21-04-2016 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Gene3D G3DSA:1.20.1270.20 159 232 2.6E-20 T 21-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 PIRSF PIRSF000076 1 551 6.8E-226 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 550 19.911 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Gene3D G3DSA:3.40.50.2030 234 379 1.4E-67 T 21-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 1.4E-157 T 21-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 PANTHER PTHR30109:SF0 1 551 4.3E-275 T 21-04-2016 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 SUPERFAMILY SSF56821 1 545 4.58E-186 T 21-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 Gene3D G3DSA:1.20.1270.20 1 158 1.1E-32 T 21-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS08215 2ca52fd5e12690f854416603f5375ab0 551 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 5.0E-222 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APL_RS04000 0907526fa9ae88dae263c3c9953923df 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 118 4.3E-35 T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APL_RS04000 0907526fa9ae88dae263c3c9953923df 120 PANTHER PTHR34299 1 119 4.0E-37 T 21-04-2016 APL_RS04000 0907526fa9ae88dae263c3c9953923df 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APL_RS04000 0907526fa9ae88dae263c3c9953923df 120 Gene3D G3DSA:1.10.3830.10 5 119 2.2E-43 T 21-04-2016 APL_RS04000 0907526fa9ae88dae263c3c9953923df 120 PANTHER PTHR34299:SF1 1 119 4.0E-37 T 21-04-2016 APL_RS05760 f8c30f9f3a5d505d815b81dfcac4f39b 360 PANTHER PTHR33529:SF1 6 360 2.7E-132 T 21-04-2016 APL_RS05760 f8c30f9f3a5d505d815b81dfcac4f39b 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 357 1.7E-129 T 21-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APL_RS05760 f8c30f9f3a5d505d815b81dfcac4f39b 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 356 3.1E-69 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APL_RS05760 f8c30f9f3a5d505d815b81dfcac4f39b 360 PANTHER PTHR33529 6 360 2.7E-132 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 Pfam PF00455 DeoR C terminal sensor domain 73 227 2.6E-39 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 PANTHER PTHR30363 1 248 2.6E-63 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 SMART SM01134 71 230 2.5E-48 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 5.1E-20 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 SMART SM00420 4 56 5.9E-21 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 Gene3D G3DSA:1.10.10.10 3 54 3.2E-9 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 SUPERFAMILY SSF46785 2 57 8.67E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 Gene3D G3DSA:3.40.50.1360 74 210 3.1E-6 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 PANTHER PTHR30363:SF15 1 248 2.6E-63 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 SUPERFAMILY SSF100950 72 229 1.99E-21 T 21-04-2016 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.4E-12 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS08935 30ffaa13d0b6e72f96aad3f6c4a6f099 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.4E-12 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APL_RS03145 f0c63476fd247f5bf8a2100068f45b4b 132 Pfam PF06295 Protein of unknown function (DUF1043) 14 129 9.9E-43 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 APL_RS03145 f0c63476fd247f5bf8a2100068f45b4b 132 PANTHER PTHR39579 3 129 2.3E-30 T 21-04-2016 APL_RS03145 f0c63476fd247f5bf8a2100068f45b4b 132 PIRSF PIRSF006318 2 132 1.9E-50 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Gene3D G3DSA:1.10.8.60 335 408 1.1E-26 T 21-04-2016 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Pfam PF01434 Peptidase family M41 384 587 1.3E-70 T 21-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Pfam PF06480 FtsH Extracellular 5 84 1.8E-10 T 21-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Gene3D G3DSA:3.40.50.300 148 334 2.2E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 589 3.2E-228 T 21-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 SUPERFAMILY SSF140990 406 596 2.75E-67 T 21-04-2016 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 21-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 PANTHER PTHR23076 5 611 0.0 T 21-04-2016 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 SMART SM00382 186 326 8.1E-24 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 SUPERFAMILY SSF52540 144 394 2.68E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 323 3.0E-44 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APL_RS03125 bf66e602fe71337e405e3e42de59b020 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 607 35.822 T 21-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 203 3.2E-55 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 200 27.801 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 SUPERFAMILY SSF53335 4 203 3.14E-41 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 PIRSF PIRSF003078 1 205 4.4E-64 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 PANTHER PTHR31760:SF0 1 203 5.0E-77 T 21-04-2016 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 PANTHER PTHR31760 1 203 5.0E-77 T 21-04-2016 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 Pfam PF02527 rRNA small subunit methyltransferase G 20 199 7.5E-61 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APL_RS08790 f42b6510ed4a34a1fb8c2a58a9d47a6f 205 Gene3D G3DSA:3.40.50.150 2 203 5.4E-69 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 PANTHER PTHR11751 92 462 2.7E-101 T 21-04-2016 APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 SUPERFAMILY SSF46785 12 87 1.04E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 SMART SM00345 24 83 2.9E-13 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 Gene3D G3DSA:1.10.10.10 12 84 4.8E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 PANTHER PTHR11751:SF10 92 462 2.7E-101 T 21-04-2016 APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 Gene3D G3DSA:3.40.640.10 137 359 1.6E-43 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 Pfam PF00155 Aminotransferase class I and II 113 430 2.1E-17 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 SUPERFAMILY SSF53383 80 459 1.1E-66 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03000 b798c066fc6037e47ba6706559f6b681 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 9.2E-16 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS01855 9a697b9e30f671af17f098543067a376 151 Gene3D G3DSA:2.10.109.10 29 138 1.1E-15 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APL_RS01855 9a697b9e30f671af17f098543067a376 151 SUPERFAMILY SSF51306 29 135 7.32E-15 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 PIRSF PIRSF005261 1 289 3.2E-68 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 Gene3D G3DSA:3.55.30.10 4 179 9.1E-64 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 7 288 32.115 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 Gene3D G3DSA:3.90.1280.10 228 284 2.4E-18 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 Pfam PF01430 Hsp33 protein 8 277 9.0E-78 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 SUPERFAMILY SSF64397 7 235 3.14E-75 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 SUPERFAMILY SSF118352 228 285 3.66E-15 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 PANTHER PTHR30111:SF1 1 292 5.2E-74 T 21-04-2016 APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 Gene3D G3DSA:1.10.287.480 180 227 4.1E-25 T 21-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain APL_RS06895 472636a15d35f111c89ec782f73f69f4 296 PANTHER PTHR30111 1 292 5.2E-74 T 21-04-2016 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.4E-46 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 21-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 PANTHER PTHR23409 197 376 6.7E-266 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 PANTHER PTHR23409 1 173 6.7E-266 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 Gene3D G3DSA:1.10.620.20 3 340 7.8E-123 T 21-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 SUPERFAMILY SSF47240 3 340 4.37E-114 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 PANTHER PTHR23409:SF23 197 376 6.7E-266 T 21-04-2016 APL_RS05200 99e18ddd0b797f93f55056bf355add4f 376 PANTHER PTHR23409:SF23 1 173 6.7E-266 T 21-04-2016 APL_RS10020 7b3156fbaee9990bfb21ebba0e239414 98 ProDom PD068240 PRECURSOR SIGNAL HI0941 PM0962 11 92 9.0E-17 T 21-04-2016 IPR020511 Uncharacterised protein family HI0941 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 SUPERFAMILY SSF51735 4 154 1.14E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 Gene3D G3DSA:3.40.50.720 1 130 7.9E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 219 3.6E-13 T 21-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 Gene3D G3DSA:3.30.360.10 131 343 1.0E-33 T 21-04-2016 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 PANTHER PTHR22604 1 347 3.0E-90 T 21-04-2016 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 119 1.1E-23 T 21-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 PANTHER PTHR22604:SF53 1 347 3.0E-90 T 21-04-2016 APL_RS06175 446d199454a2ba1c44c0bf8022d7b153 347 SUPERFAMILY SSF55347 128 277 1.96E-25 T 21-04-2016 APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 SMART SM00382 29 212 2.8E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 Gene3D G3DSA:3.40.50.300 2 229 3.6E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 Pfam PF00005 ABC transporter 21 164 1.2E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 PANTHER PTHR24220:SF305 5 302 1.6E-165 T 21-04-2016 APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 SUPERFAMILY SSF52540 3 232 3.38E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01370 77be828c17a4bb278b72d04fc0535536 302 PANTHER PTHR24220 5 302 1.6E-165 T 21-04-2016 APL_RS02885 a44db840104c3351b7ea23d38cd96442 161 Pfam PF07811 TadE-like protein 14 56 1.0E-6 T 21-04-2016 IPR012495 TadE-like APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 2.4E-9 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 2.4E-9 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 2.4E-9 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 2.4E-9 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 Pfam PF01061 ABC-2 type transporter 6 215 7.0E-38 T 21-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PANTHER PTHR30413 1 253 6.9E-132 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PIRSF PIRSF006648 9 250 2.2E-30 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS01365 64ee10c9adc007d8a2690bea64dda11d 253 PANTHER PTHR30413:SF2 1 253 6.9E-132 T 21-04-2016 APL_RS02495 31e590744f902fe5e1c6333aab15ba05 248 PANTHER PTHR30336 1 248 2.3E-42 T 21-04-2016 APL_RS02495 31e590744f902fe5e1c6333aab15ba05 248 Pfam PF02698 DUF218 domain 79 240 2.2E-28 T 21-04-2016 IPR003848 Domain of unknown function DUF218 APL_RS02495 31e590744f902fe5e1c6333aab15ba05 248 PANTHER PTHR30336:SF1 1 248 2.3E-42 T 21-04-2016 APL_RS02495 31e590744f902fe5e1c6333aab15ba05 248 Gene3D G3DSA:3.40.50.620 71 208 4.1E-35 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 437 52.84 T 21-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 SUPERFAMILY SSF55920 158 439 7.33E-52 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 Gene3D G3DSA:3.90.230.10 156 434 3.0E-50 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 PANTHER PTHR10804 4 431 3.5E-133 T 21-04-2016 APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 329 341 - T 21-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 Pfam PF00557 Metallopeptidase family M24 164 423 9.7E-37 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS00480 9d766076c82d500e3b10f8837a6fb057 443 PANTHER PTHR10804:SF101 4 431 3.5E-133 T 21-04-2016 APL_RS06290 6c39b544adfdf11183dc9b4082d5055e 187 Pfam PF04336 Protein of unknown function, DUF479 71 163 9.6E-15 T 21-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APL_RS06290 6c39b544adfdf11183dc9b4082d5055e 187 PANTHER PTHR38764 7 185 9.8E-19 T 21-04-2016 APL_RS06290 6c39b544adfdf11183dc9b4082d5055e 187 PANTHER PTHR38764:SF1 7 185 9.8E-19 T 21-04-2016 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Gene3D G3DSA:3.90.190.20 316 453 4.6E-36 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 5 453 1.2E-248 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 PANTHER PTHR23135 1 453 1.6E-276 T 21-04-2016 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 PANTHER PTHR23135:SF17 1 453 1.6E-276 T 21-04-2016 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Pfam PF08245 Mur ligase middle domain 111 294 1.8E-22 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Pfam PF01225 Mur ligase family, catalytic domain 5 102 2.8E-17 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Gene3D G3DSA:3.40.1190.10 95 315 8.9E-83 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 SUPERFAMILY SSF51984 4 92 3.01E-23 T 21-04-2016 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 4 453 56.914 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 SUPERFAMILY SSF53623 96 311 1.06E-50 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Gene3D G3DSA:3.40.50.720 2 93 1.6E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 384 4.4E-10 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS07650 48fc849fd30347a68604be9a4aaa8f1c 454 SUPERFAMILY SSF53244 315 452 1.2E-36 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 PANTHER PTHR30489:SF8 4 416 7.6E-76 T 21-04-2016 APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 415 1.3E-145 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 PANTHER PTHR30489 4 416 7.6E-76 T 21-04-2016 APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 Pfam PF12704 MacB-like periplasmic core domain 25 240 2.2E-11 T 21-04-2016 IPR025857 MacB-like periplasmic core domain APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 2 416 1.1E-183 T 21-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 APL_RS10785 4a66ae2f958bcb8121d074b3a7479479 416 Pfam PF02687 FtsX-like permease family 276 409 1.4E-17 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APL_RS10050 28dce1692806f9cee87973b04c62b8f1 148 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 1.0E-59 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APL_RS10050 28dce1692806f9cee87973b04c62b8f1 148 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 5.2E-64 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APL_RS10050 28dce1692806f9cee87973b04c62b8f1 148 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.791 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 137 1.3E-5 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 SUPERFAMILY SSF56935 2 657 7.56E-78 T 21-04-2016 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 Gene3D G3DSA:2.40.170.20 160 657 2.9E-75 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 PANTHER PTHR32552 586 649 1.3E-51 T 21-04-2016 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 PANTHER PTHR32552 6 568 1.3E-51 T 21-04-2016 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 Pfam PF00593 TonB dependent receptor 450 654 1.5E-18 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 PANTHER PTHR32552:SF14 6 568 1.3E-51 T 21-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 PANTHER PTHR32552:SF14 586 649 1.3E-51 T 21-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APL_RS02970 a422b29ebe166a4d60eb92ca56fccef4 657 Gene3D G3DSA:2.170.130.10 2 156 5.7E-12 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 Pfam PF02132 RecR protein 42 77 1.8E-14 T 21-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 PANTHER PTHR30446:SF0 1 201 4.0E-115 T 21-04-2016 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.192 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 Pfam PF13662 Toprim domain 82 172 1.1E-21 T 21-04-2016 IPR006171 Toprim domain APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 21-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.9E-79 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 PANTHER PTHR30446 1 201 4.0E-115 T 21-04-2016 APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 SMART SM00493 81 166 8.9E-15 T 21-04-2016 IPR006171 Toprim domain APL_RS00395 d54fe66c7316824dcd586e0c6fa07590 201 SUPERFAMILY SSF111304 2 199 5.89E-72 T 21-04-2016 IPR023627 Recombination protein RecR APL_RS07450 cd1534d3f5c1c75d8211b48915c6df83 206 SUPERFAMILY SSF46955 1 79 2.75E-12 T 21-04-2016 IPR009061 Putative DNA-binding domain APL_RS07450 cd1534d3f5c1c75d8211b48915c6df83 206 SMART SM00422 2 72 0.0061 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS07450 cd1534d3f5c1c75d8211b48915c6df83 206 Gene3D G3DSA:1.10.1660.10 3 73 4.3E-12 T 21-04-2016 APL_RS07450 cd1534d3f5c1c75d8211b48915c6df83 206 Pfam PF13411 MerR HTH family regulatory protein 3 71 1.6E-13 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:3.40.50.300 198 245 4.3E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07860 9d95687900e712d561d67b2688fede13 452 SUPERFAMILY SSF116878 377 452 1.07E-50 T 21-04-2016 APL_RS07860 9d95687900e712d561d67b2688fede13 452 SUPERFAMILY SSF116878 119 218 1.07E-50 T 21-04-2016 APL_RS07860 9d95687900e712d561d67b2688fede13 452 SUPERFAMILY SSF52540 70 168 1.49E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07860 9d95687900e712d561d67b2688fede13 452 SUPERFAMILY SSF52540 202 370 1.49E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07860 9d95687900e712d561d67b2688fede13 452 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 3.7E-33 T 21-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APL_RS07860 9d95687900e712d561d67b2688fede13 452 PANTHER PTHR11649 6 452 9.4E-163 T 21-04-2016 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 452 32.5 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:3.30.1360.120 2 119 6.2E-41 T 21-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:3.40.50.300 284 374 6.4E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07860 9d95687900e712d561d67b2688fede13 452 Pfam PF01926 50S ribosome-binding GTPase 216 334 1.5E-25 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS07860 9d95687900e712d561d67b2688fede13 452 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 368 4.9E-23 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:1.20.120.430 382 452 3.6E-58 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:1.20.120.430 120 180 3.6E-58 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Gene3D G3DSA:1.20.120.430 246 269 3.6E-58 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APL_RS07860 9d95687900e712d561d67b2688fede13 452 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 452 9.0E-102 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APL_RS07860 9d95687900e712d561d67b2688fede13 452 PANTHER PTHR11649:SF56 6 452 9.4E-163 T 21-04-2016 APL_RS07860 9d95687900e712d561d67b2688fede13 452 Pfam PF12631 MnmE helical domain 121 449 1.6E-57 T 21-04-2016 IPR025867 MnmE, helical domain APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 Gene3D G3DSA:3.40.50.300 44 164 4.1E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 Pfam PF02794 RTX toxin acyltransferase family 10 128 9.2E-44 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 130 151 1.9E-41 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 76 98 1.9E-41 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 54 72 1.9E-41 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS07630 2bee3c869f256d0fa0cde30e2d63012a 172 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 12 28 1.9E-41 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 8.8E-63 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 Gene3D G3DSA:3.90.45.10 5 167 6.4E-64 T 21-04-2016 IPR023635 Peptide deformylase APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 Pfam PF01327 Polypeptide deformylase 4 152 7.2E-52 T 21-04-2016 IPR023635 Peptide deformylase APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PIRSF PIRSF004749 1 170 9.2E-59 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PANTHER PTHR10458 1 168 9.1E-85 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.503 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PRINTS PR01576 Peptide deformylase signature 89 100 2.5E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PRINTS PR01576 Peptide deformylase signature 120 149 2.5E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PRINTS PR01576 Peptide deformylase signature 101 119 2.5E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PRINTS PR01576 Peptide deformylase signature 33 62 2.5E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 SUPERFAMILY SSF56420 3 165 1.96E-61 T 21-04-2016 IPR023635 Peptide deformylase APL_RS09080 b9b755cf844ba667f440a71a70ed4bb7 170 PANTHER PTHR10458:SF10 1 168 9.1E-85 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 304 7.1E-96 T 21-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 SUPERFAMILY SSF109604 312 495 2.51E-49 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 Gene3D G3DSA:3.30.420.40 6 130 3.0E-42 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 PANTHER PTHR30005:SF4 9 501 2.1E-184 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 Gene3D G3DSA:3.30.420.150 131 306 3.7E-50 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 SUPERFAMILY SSF53067 137 306 9.33E-44 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 SUPERFAMILY SSF53067 12 132 1.58E-35 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 PANTHER PTHR30005 9 501 2.1E-184 T 21-04-2016 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 Pfam PF02541 Ppx/GppA phosphatase family 25 307 5.6E-92 T 21-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APL_RS03690 a583e0ed373066f2880b3eb1df389701 502 PIRSF PIRSF001267 2 502 2.5E-196 T 21-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 436 4.0E-156 T 21-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 Pfam PF04055 Radical SAM superfamily 150 323 1.0E-27 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 Pfam PF01938 TRAM domain 377 439 5.4E-21 T 21-04-2016 IPR002792 TRAM domain APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 3.6E-29 T 21-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 439 6.0E-205 T 21-04-2016 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 PANTHER PTHR11918 3 471 1.3E-233 T 21-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 Gene3D G3DSA:3.80.30.20 145 378 5.9E-81 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 SMART SM00729 146 366 2.4E-63 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 21-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 PANTHER PTHR11918:SF43 3 471 1.3E-233 T 21-04-2016 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 440 74.346 T 21-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APL_RS06950 c369b2e06280c7d3a152bbab86b36358 475 SUPERFAMILY SSF102114 128 371 2.88E-62 T 21-04-2016 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PANTHER PTHR11406 1 388 1.9E-190 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 304 329 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 363 380 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 340 351 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 1.2E-79 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 Pfam PF00162 Phosphoglycerate kinase 6 377 4.5E-131 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 387 37.936 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 Gene3D G3DSA:3.40.50.1270 176 375 1.3E-76 T 21-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 PIRSF PIRSF000724 1 391 1.9E-129 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 SUPERFAMILY SSF53748 3 387 4.12E-139 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS06530 6efeedda170dd50dd166fa3a19b1f2d8 391 Gene3D G3DSA:3.40.50.1260 5 175 1.2E-60 T 21-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 Gene3D G3DSA:3.90.1310.10 248 344 3.4E-25 T 21-04-2016 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 Gene3D G3DSA:3.40.710.10 345 662 9.3E-81 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS00060 ecae4f490b38047baab590bc17131b17 686 SUPERFAMILY SSF56519 228 337 5.89E-34 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 SUPERFAMILY SSF56519 76 140 5.89E-34 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 Pfam PF03717 Penicillin-binding Protein dimerisation domain 83 324 1.9E-15 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 SUPERFAMILY SSF56601 290 671 5.64E-82 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS00060 ecae4f490b38047baab590bc17131b17 686 PANTHER PTHR30627 21 132 1.9E-189 T 21-04-2016 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 PANTHER PTHR30627 211 683 1.9E-189 T 21-04-2016 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 363 655 2.2E-77 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 PANTHER PTHR30627:SF1 21 132 1.9E-189 T 21-04-2016 APL_RS00060 ecae4f490b38047baab590bc17131b17 686 PANTHER PTHR30627:SF1 211 683 1.9E-189 T 21-04-2016 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Pfam PF02080 TrkA-C domain 291 359 1.3E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Pfam PF02080 TrkA-C domain 212 273 1.0E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 59.881 T 21-04-2016 IPR023018 Transport protein YidE, putative APL_RS05065 804a1323a29a4b69709e94267ca65550 552 PANTHER PTHR30445:SF1 1 549 5.2E-245 T 21-04-2016 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Gene3D G3DSA:3.30.70.1450 293 359 4.7E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Gene3D G3DSA:3.30.70.1450 214 275 2.3E-6 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 SUPERFAMILY SSF116726 201 272 2.88E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 PANTHER PTHR30445 1 549 5.2E-245 T 21-04-2016 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 165 6.3E-36 T 21-04-2016 IPR006512 YidE/YbjL duplication APL_RS05065 804a1323a29a4b69709e94267ca65550 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 378 532 6.2E-45 T 21-04-2016 IPR006512 YidE/YbjL duplication APL_RS05065 804a1323a29a4b69709e94267ca65550 552 SUPERFAMILY SSF116726 292 359 1.96E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Pfam PF06826 Predicted Permease Membrane Region 11 178 3.0E-41 T 21-04-2016 IPR006512 YidE/YbjL duplication APL_RS05065 804a1323a29a4b69709e94267ca65550 552 Pfam PF06826 Predicted Permease Membrane Region 373 545 6.6E-45 T 21-04-2016 IPR006512 YidE/YbjL duplication APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 Pfam PF00281 Ribosomal protein L5 24 80 8.3E-29 T 21-04-2016 IPR031310 Ribosomal protein L5, N-terminal APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 Gene3D G3DSA:3.30.1440.10 2 179 1.9E-79 T 21-04-2016 IPR022803 Ribosomal protein L5 domain APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 21-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 SUPERFAMILY SSF55282 4 179 6.83E-79 T 21-04-2016 IPR022803 Ribosomal protein L5 domain APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-40 T 21-04-2016 IPR031309 Ribosomal protein L5, C-terminal APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 PIRSF PIRSF002161 1 179 5.4E-67 T 21-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.78 T 21-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09420 2de6319570f1a256f926d45a77c91ef6 179 PANTHER PTHR11994 1 178 3.9E-100 T 21-04-2016 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 Pfam PF01872 RibD C-terminal domain 147 356 9.1E-64 T 21-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 PANTHER PTHR11079 3 218 1.0E-63 T 21-04-2016 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 PANTHER PTHR11079:SF10 3 218 1.0E-63 T 21-04-2016 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 PIRSF PIRSF006769 1 363 1.2E-160 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 SUPERFAMILY SSF53927 3 144 9.6E-48 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 5.4E-21 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 359 1.7E-70 T 21-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 Gene3D G3DSA:3.40.430.10 128 358 9.3E-83 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 SUPERFAMILY SSF53597 144 356 1.78E-59 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 356 1.2E-116 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APL_RS01965 3b6b0f6cf8247f3bf06ed180ab8ec3ae 364 Gene3D G3DSA:3.40.140.10 2 127 1.9E-34 T 21-04-2016 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 PANTHER PTHR21000 406 611 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 PANTHER PTHR21000 4 371 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 8.2E-264 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.974 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 PANTHER PTHR21000:SF11 406 611 0.0 T 21-04-2016 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 PANTHER PTHR21000:SF11 4 371 0.0 T 21-04-2016 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 SUPERFAMILY SSF52016 421 608 4.94E-59 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 Pfam PF00920 Dehydratase family 34 604 1.6E-217 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 SUPERFAMILY SSF143975 5 420 5.1E-135 T 21-04-2016 APL_RS00510 2e920880556e2add0c3761af8424eb6b 611 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS01585 416f26265b633f61a65ff903fb979cf0 348 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 44 333 7.2E-102 T 21-04-2016 IPR006507 Uncharacterised protein family UPF0283 APL_RS01585 416f26265b633f61a65ff903fb979cf0 348 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 12 339 35.678 T 21-04-2016 IPR006507 Uncharacterised protein family UPF0283 APL_RS01585 416f26265b633f61a65ff903fb979cf0 348 PANTHER PTHR39342 1 348 1.5E-92 T 21-04-2016 APL_RS01585 416f26265b633f61a65ff903fb979cf0 348 Pfam PF05128 Domain of unknown function (DUF697) 175 333 6.5E-54 T 21-04-2016 IPR021147 Protein of unknown function DUF697 APL_RS01585 416f26265b633f61a65ff903fb979cf0 348 PANTHER PTHR39342:SF1 1 348 1.5E-92 T 21-04-2016 APL_RS06900 552b5e1d74b1288d5b18196149a5df4b 444 PANTHER PTHR36106 1 444 3.4E-242 T 21-04-2016 APL_RS06900 552b5e1d74b1288d5b18196149a5df4b 444 PANTHER PTHR36106:SF3 1 444 3.4E-242 T 21-04-2016 APL_RS06900 552b5e1d74b1288d5b18196149a5df4b 444 PIRSF PIRSF004539 1 444 7.0E-166 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS06900 552b5e1d74b1288d5b18196149a5df4b 444 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 1.4E-139 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS06900 552b5e1d74b1288d5b18196149a5df4b 444 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 375 5.0E-142 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.0E-277 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PANTHER PTHR11451:SF3 4 245 1.7E-156 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PANTHER PTHR11451:SF3 397 570 1.7E-156 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Pfam PF03129 Anticodon binding domain 475 568 3.0E-22 T 21-04-2016 IPR004154 Anticodon-binding APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 374 7.9E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 SUPERFAMILY SSF52954 462 569 1.96E-30 T 21-04-2016 IPR004154 Anticodon-binding APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 SUPERFAMILY SSF55681 405 477 1.47E-103 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 SUPERFAMILY SSF55681 10 237 1.47E-103 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Gene3D G3DSA:3.90.960.10 250 386 1.2E-29 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PANTHER PTHR11451 4 245 1.7E-156 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PANTHER PTHR11451 397 570 1.7E-156 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.211 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 SUPERFAMILY SSF55826 218 388 1.7E-29 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 4.1E-47 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Gene3D G3DSA:3.30.930.10 6 204 2.4E-107 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Gene3D G3DSA:3.30.930.10 390 466 2.4E-107 T 21-04-2016 APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 Gene3D G3DSA:3.40.50.800 469 570 1.5E-33 T 21-04-2016 IPR004154 Anticodon-binding APL_RS09725 fd5955d7df2083afa75b95f74b0ff9fd 571 PIRSF PIRSF001535 1 571 1.8E-268 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF50249 133 199 1.72E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03340 51d55712795b95775a9212949c5dee29 493 Pfam PF13184 NusA-like KH domain 230 296 9.0E-29 T 21-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APL_RS03340 51d55712795b95775a9212949c5dee29 493 PANTHER PTHR22648 1 449 2.8E-171 T 21-04-2016 APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF69705 1 126 5.23E-39 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:3.30.300.20 278 346 1.7E-26 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF54814 279 342 3.99E-14 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Pfam PF08529 NusA N-terminal domain 4 124 3.6E-34 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:2.40.50.140 128 197 1.1E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03340 51d55712795b95775a9212949c5dee29 493 SMART SM00316 133 200 6.5E-7 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF54814 202 278 8.5E-29 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APL_RS03340 51d55712795b95775a9212949c5dee29 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 342 1.9E-123 T 21-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Pfam PF14520 Helix-hairpin-helix domain 433 487 1.6E-9 T 21-04-2016 APL_RS03340 51d55712795b95775a9212949c5dee29 493 PANTHER PTHR22648:SF0 1 449 2.8E-171 T 21-04-2016 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:3.30.1480.10 1 124 6.6E-41 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APL_RS03340 51d55712795b95775a9212949c5dee29 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 490 1.4E-16 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APL_RS03340 51d55712795b95775a9212949c5dee29 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.6E-17 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:1.10.150.20 354 421 1.4E-17 T 21-04-2016 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:1.10.150.20 430 492 4.5E-23 T 21-04-2016 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 430 27.845 T 21-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF47794 354 415 1.73E-12 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APL_RS03340 51d55712795b95775a9212949c5dee29 493 SUPERFAMILY SSF47794 431 492 9.26E-17 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APL_RS03340 51d55712795b95775a9212949c5dee29 493 Gene3D G3DSA:3.30.300.20 199 277 8.4E-34 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS07155 179771aca9a6b4b3eb5bdd3fe2b90fec 189 Pfam PF04315 Elongation factor P hydroxylase 14 184 5.0E-72 T 21-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 Gene3D G3DSA:3.10.20.30 1 66 1.1E-20 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.2E-18 T 21-04-2016 IPR010035 ThiS, thiamine-biosynthesis APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 PANTHER PTHR34472:SF1 1 66 9.2E-18 T 21-04-2016 APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 SUPERFAMILY SSF54285 1 66 9.98E-16 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 PANTHER PTHR34472 1 66 9.2E-18 T 21-04-2016 APL_RS02815 b805fd814dce593fa3b7a0138740fb70 66 Pfam PF02597 ThiS family 10 66 6.0E-12 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 233 1.4E-28 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 Gene3D G3DSA:3.40.50.1000 182 268 7.2E-51 T 21-04-2016 IPR023214 HAD-like domain APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 Gene3D G3DSA:3.40.50.1000 2 76 7.2E-51 T 21-04-2016 IPR023214 HAD-like domain APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 SUPERFAMILY SSF56784 4 267 5.17E-60 T 21-04-2016 IPR023214 HAD-like domain APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 1.5E-61 T 21-04-2016 IPR023214 HAD-like domain APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 21-04-2016 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 Gene3D G3DSA:3.30.1240.10 87 181 3.7E-22 T 21-04-2016 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 264 2.0E-52 T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 PANTHER PTHR10000:SF20 3 270 3.3E-104 T 21-04-2016 APL_RS02015 2a54bd991da817bdd08befaecc22d101 271 PANTHER PTHR10000 3 270 3.3E-104 T 21-04-2016 APL_RS04605 53a0c21fc78cdcad4bbdbf89123459f9 77 Pfam PF10688 Bacterial inner membrane protein 3 68 1.9E-7 T 21-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV APL_RS04605 53a0c21fc78cdcad4bbdbf89123459f9 77 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 1 65 8.0E-17 T 21-04-2016 IPR020137 Uncharacterised protein family HI1736 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 158 31.981 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 Gene3D G3DSA:3.40.50.620 4 157 1.0E-51 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.1E-56 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 57 3.1E-17 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 SUPERFAMILY SSF52374 4 157 4.29E-42 T 21-04-2016 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 Pfam PF01467 Cytidylyltransferase-like 6 134 2.1E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PANTHER PTHR21342 1 157 8.7E-71 T 21-04-2016 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PANTHER PTHR21342:SF1 1 157 8.7E-71 T 21-04-2016 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 5.8E-46 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 5.8E-46 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 5.8E-46 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 5.8E-46 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS05905 facd9d60419fdfb6e4adab947e67efcd 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 5.8E-46 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 1.6E-66 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 Gene3D G3DSA:1.10.3860.10 10 403 9.6E-82 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 35.266 T 21-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 1.2E-15 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PANTHER PTHR11958 13 403 6.2E-210 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 SUPERFAMILY SSF118215 15 398 6.67E-94 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03995 bf8c95ed82740560f3439467bc3feaed 404 PANTHER PTHR11958:SF68 13 403 6.2E-210 T 21-04-2016 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 SUPERFAMILY SSF51998 5 769 1.01E-290 T 21-04-2016 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 PIRSF PIRSF000379 8 770 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 Pfam PF02901 Pyruvate formate lyase-like 24 624 6.5E-205 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 PANTHER PTHR30191:SF0 1 770 0.0 T 21-04-2016 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 ProSitePatterns PS00850 Glycine radical domain signature. 740 748 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APL_RS05415 c69b7b0767a815dd7139950baa058585 770 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 770 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 Gene3D G3DSA:3.20.70.20 5 770 0.0 T 21-04-2016 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 PANTHER PTHR30191 1 770 0.0 T 21-04-2016 APL_RS05415 c69b7b0767a815dd7139950baa058585 770 Pfam PF01228 Glycine radical 640 751 1.9E-42 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APL_RS10585 e4b86910365a487092f5c9ccfc74bd54 183 SUPERFAMILY SSF52218 3 174 6.37E-41 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS10585 e4b86910365a487092f5c9ccfc74bd54 183 PANTHER PTHR30543:SF6 1 180 7.1E-36 T 21-04-2016 APL_RS10585 e4b86910365a487092f5c9ccfc74bd54 183 PANTHER PTHR30543 1 180 7.1E-36 T 21-04-2016 APL_RS10585 e4b86910365a487092f5c9ccfc74bd54 183 Pfam PF03358 NADPH-dependent FMN reductase 4 141 2.5E-29 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APL_RS10585 e4b86910365a487092f5c9ccfc74bd54 183 Gene3D G3DSA:3.40.50.360 1 181 7.0E-42 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 554 51.882 T 21-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PANTHER PTHR11451:SF29 273 552 1.2E-229 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PANTHER PTHR11451:SF29 3 252 1.2E-229 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 50 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:3.90.800.10 106 214 1.2E-49 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 33 343 5.5E-124 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 346 533 9.7E-60 T 21-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 SUPERFAMILY SSF50715 346 552 7.85E-76 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 SUPERFAMILY SSF52374 33 352 8.16E-102 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:2.40.240.10 354 466 1.0E-47 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:1.10.1160.10 269 344 1.1E-36 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PANTHER PTHR11451 273 552 1.2E-229 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PANTHER PTHR11451 3 252 1.2E-229 T 21-04-2016 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 33 554 2.7E-302 T 21-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:2.40.240.10 467 552 3.2E-31 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 65 78 9.0E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 48 9.0E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 50 61 9.0E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 225 9.0E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:3.40.50.620 217 268 4.1E-42 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS03545 da72be6160f4bc7a47e50110fc871f0d 556 Gene3D G3DSA:3.40.50.620 33 101 4.1E-42 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.1E-39 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 SMART SM00518 3 279 4.4E-123 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 277 1.0E-105 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 PANTHER PTHR21445 1 280 4.7E-149 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 SUPERFAMILY SSF51658 1 278 2.88E-99 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 Gene3D G3DSA:3.20.20.150 1 278 1.7E-117 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.529 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 PANTHER PTHR21445:SF0 1 280 4.7E-149 T 21-04-2016 APL_RS01845 094625f25c746d5c2b4bffe525a6897c 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APL_RS01110 5ece46f1ca9a22ea235d321adfd20239 319 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 7 316 4.6E-109 T 21-04-2016 IPR013398 CRISPR-associated protein Csy2 APL_RS01110 5ece46f1ca9a22ea235d321adfd20239 319 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 8 314 5.5E-101 T 21-04-2016 IPR013398 CRISPR-associated protein Csy2 APL_RS06690 9fb6249401bcf10ce029027c3de1b9f2 55 SUPERFAMILY SSF158997 1 54 9.16E-17 T 21-04-2016 APL_RS06690 9fb6249401bcf10ce029027c3de1b9f2 55 Pfam PF03966 Trm112p-like protein 3 41 8.6E-6 T 21-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APL_RS06690 9fb6249401bcf10ce029027c3de1b9f2 55 PANTHER PTHR33505 1 55 2.8E-17 T 21-04-2016 APL_RS06690 9fb6249401bcf10ce029027c3de1b9f2 55 Gene3D G3DSA:2.20.25.10 9 54 9.5E-19 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Gene3D G3DSA:3.40.630.10 317 376 3.1E-75 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Gene3D G3DSA:3.40.630.10 3 188 3.1E-75 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 SUPERFAMILY SSF53187 3 179 5.5E-69 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 SUPERFAMILY SSF53187 293 375 5.5E-69 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Pfam PF01546 Peptidase family M20/M25/M40 64 372 3.5E-43 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Pfam PF07687 Peptidase dimerisation domain 176 282 1.4E-22 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 PANTHER PTHR11014 2 375 5.7E-98 T 21-04-2016 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 2.8E-175 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Gene3D G3DSA:3.30.70.360 189 289 6.4E-32 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 50.472 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 SUPERFAMILY SSF55031 180 289 1.94E-27 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain APL_RS09965 f00f5d58fd6ddbd0bce589b4175924dc 377 PANTHER PTHR11014:SF106 2 375 5.7E-98 T 21-04-2016 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 PANTHER PTHR30408:SF2 170 349 2.8E-12 T 21-04-2016 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 SUPERFAMILY SSF116734 180 360 3.11E-29 T 21-04-2016 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 Pfam PF01420 Type I restriction modification DNA specificity domain 12 164 1.1E-12 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 Pfam PF01420 Type I restriction modification DNA specificity domain 182 344 3.6E-21 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 SUPERFAMILY SSF116734 11 181 2.78E-20 T 21-04-2016 APL_RS01495 820af806b68d88b289a95a4d4d979c6d 364 PANTHER PTHR30408 170 349 2.8E-12 T 21-04-2016 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 451 1.7E-156 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PANTHER PTHR30023 31 477 1.8E-114 T 21-04-2016 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 Gene3D G3DSA:3.40.710.10 231 456 3.8E-57 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS04935 eb96634104a4a81040e197c74842fb31 480 SUPERFAMILY SSF56601 32 474 1.73E-94 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PANTHER PTHR30023:SF0 31 477 1.8E-114 T 21-04-2016 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 290 312 1.9E-34 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 349 363 1.9E-34 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 428 441 1.9E-34 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 65 84 1.9E-34 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 364 378 1.9E-34 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS04935 eb96634104a4a81040e197c74842fb31 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 472 1.8E-149 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 3.7E-104 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.404 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 PANTHER PTHR30335 2 198 2.9E-143 T 21-04-2016 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.9E-56 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 PIRSF PIRSF006102 1 198 4.9E-62 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00795 080d69c761c4f5b00f2f4b0c412fb947 198 PANTHER PTHR30335:SF1 2 198 2.9E-143 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS09065 6aec17000fcdb9a04f4ef1999c48ab99 200 Gene3D G3DSA:1.25.40.10 64 171 3.7E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS09065 6aec17000fcdb9a04f4ef1999c48ab99 200 SMART SM00028 85 118 0.29 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS09065 6aec17000fcdb9a04f4ef1999c48ab99 200 SMART SM00028 119 153 74.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS09065 6aec17000fcdb9a04f4ef1999c48ab99 200 Pfam PF14559 Tetratricopeptide repeat 95 149 1.8E-7 T 21-04-2016 APL_RS09065 6aec17000fcdb9a04f4ef1999c48ab99 200 SUPERFAMILY SSF48452 75 156 2.42E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS08560 db78d11a938a5b5965a9875141a66943 236 PANTHER PTHR33620 15 236 8.7E-50 T 21-04-2016 APL_RS08560 db78d11a938a5b5965a9875141a66943 236 PANTHER PTHR33620:SF1 15 236 8.7E-50 T 21-04-2016 APL_RS08560 db78d11a938a5b5965a9875141a66943 236 Hamap MF_01385 Urease accessory protein UreF [ureF]. 12 236 27.252 T 21-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APL_RS08560 db78d11a938a5b5965a9875141a66943 236 PIRSF PIRSF009467 10 236 2.1E-71 T 21-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APL_RS08560 db78d11a938a5b5965a9875141a66943 236 Pfam PF01730 UreF 44 193 2.2E-31 T 21-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 PANTHER PTHR10584 1 335 2.5E-150 T 21-04-2016 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 Gene3D G3DSA:3.40.1190.20 13 315 3.5E-66 T 21-04-2016 IPR029056 Ribokinase-like APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 SUPERFAMILY SSF52374 341 472 2.64E-23 T 21-04-2016 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 75 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 313 8.1E-132 T 21-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 Pfam PF00294 pfkB family carbohydrate kinase 12 307 1.1E-51 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 5 475 43.632 T 21-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 Gene3D G3DSA:3.40.50.620 341 462 1.4E-36 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 343 409 6.1E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 Pfam PF01467 Cytidylyltransferase-like 346 470 7.2E-16 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 PANTHER PTHR10584:SF159 1 335 2.5E-150 T 21-04-2016 APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 SUPERFAMILY SSF53613 12 311 1.15E-59 T 21-04-2016 IPR029056 Ribokinase-like APL_RS02065 2ec86c9b6cafa6a22347474d7fb519df 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 1.5E-65 T 21-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APL_RS05545 8a7ebdbbcaef07305f8ac6d2941cf606 124 PANTHER PTHR36571:SF1 7 124 3.7E-31 T 21-04-2016 APL_RS05545 8a7ebdbbcaef07305f8ac6d2941cf606 124 Gene3D G3DSA:2.40.50.200 19 124 2.4E-35 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05545 8a7ebdbbcaef07305f8ac6d2941cf606 124 Pfam PF04076 Bacterial OB fold (BOF) protein 27 122 6.0E-30 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05545 8a7ebdbbcaef07305f8ac6d2941cf606 124 SUPERFAMILY SSF101756 23 122 1.44E-30 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05545 8a7ebdbbcaef07305f8ac6d2941cf606 124 PANTHER PTHR36571 7 124 3.7E-31 T 21-04-2016 APL_RS05665 a4e5da5d9fcceb8ea1a382f1aa4dfff5 215 PANTHER PTHR36920:SF1 1 215 2.9E-56 T 21-04-2016 APL_RS05665 a4e5da5d9fcceb8ea1a382f1aa4dfff5 215 SUPERFAMILY SSF56925 23 215 1.1E-24 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS05665 a4e5da5d9fcceb8ea1a382f1aa4dfff5 215 Pfam PF03922 OmpW family 23 215 1.8E-50 T 21-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 APL_RS05665 a4e5da5d9fcceb8ea1a382f1aa4dfff5 215 Gene3D G3DSA:2.40.160.20 22 215 2.7E-55 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS05665 a4e5da5d9fcceb8ea1a382f1aa4dfff5 215 PANTHER PTHR36920 1 215 2.9E-56 T 21-04-2016 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.0E-6 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.0E-6 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.0E-6 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 Gene3D G3DSA:1.10.10.10 7 95 3.9E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 SMART SM00418 13 91 9.3E-23 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 PANTHER PTHR33154 6 94 2.7E-20 T 21-04-2016 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 Pfam PF01022 Bacterial regulatory protein, arsR family 20 64 1.1E-12 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS02480 bb3efa1ec1ba79f5358eb6b5f03211e8 95 SUPERFAMILY SSF46785 10 94 1.63E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08255 281a329ce179fdb0c7dabe61c8140426 357 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4 344 2.5E-142 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APL_RS08255 281a329ce179fdb0c7dabe61c8140426 357 PANTHER PTHR22926:SF3 1 351 2.1E-94 T 21-04-2016 APL_RS08255 281a329ce179fdb0c7dabe61c8140426 357 Pfam PF00953 Glycosyl transferase family 4 69 228 2.1E-29 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS08255 281a329ce179fdb0c7dabe61c8140426 357 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 346 26.942 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APL_RS08255 281a329ce179fdb0c7dabe61c8140426 357 PANTHER PTHR22926 1 351 2.1E-94 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 Gene3D G3DSA:3.60.21.10 1 132 9.0E-54 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 Gene3D G3DSA:3.60.21.10 169 267 9.0E-54 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 270 44.812 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 2.0E-130 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 SUPERFAMILY SSF56300 1 259 4.32E-56 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 PANTHER PTHR24032:SF27 1 266 3.3E-135 T 21-04-2016 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 Pfam PF00149 Calcineurin-like phosphoesterase 3 136 1.4E-13 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 PANTHER PTHR24032 1 266 3.3E-135 T 21-04-2016 APL_RS03955 0c7216465313f9ed46f10e2c565cefaa 270 PIRSF PIRSF000903 1 270 1.4E-115 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 PANTHER PTHR10108:SF910 2 230 2.9E-112 T 21-04-2016 APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 230 3.6E-90 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 Gene3D G3DSA:3.40.50.150 19 217 3.5E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 SUPERFAMILY SSF53335 10 229 3.53E-50 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 234 37.542 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 Pfam PF13489 Methyltransferase domain 49 203 9.5E-26 T 21-04-2016 APL_RS01475 26c7f4b7dea979e3aa14098570fe0397 234 PANTHER PTHR10108 2 230 2.9E-112 T 21-04-2016 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 PANTHER PTHR30537 1 295 4.5E-117 T 21-04-2016 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 Gene3D G3DSA:1.10.10.10 3 87 4.6E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 SUPERFAMILY SSF46785 4 87 1.31E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 SUPERFAMILY SSF53850 87 292 5.74E-48 T 21-04-2016 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 Pfam PF03466 LysR substrate binding domain 89 287 3.5E-43 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 PANTHER PTHR30537:SF5 1 295 4.5E-117 T 21-04-2016 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 Gene3D G3DSA:3.40.190.10 89 163 2.2E-5 T 21-04-2016 APL_RS03635 07cb2b85a8d486165e307b9fa4a5577d 298 Gene3D G3DSA:3.40.190.10 164 257 4.6E-23 T 21-04-2016 APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.0E-68 T 21-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 Gene3D G3DSA:3.40.50.2020 7 212 2.8E-79 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 PANTHER PTHR19278:SF36 1 213 1.3E-134 T 21-04-2016 APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 Pfam PF00156 Phosphoribosyl transferase domain 45 161 2.2E-13 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 SUPERFAMILY SSF53271 2 200 2.84E-47 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 34.226 T 21-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS01645 49459d21d6be0b76e9a598fd94b5f818 213 PANTHER PTHR19278 1 213 1.3E-134 T 21-04-2016 APL_RS04845 d93b2049ca2ad3533ebc0b91d9a64c32 150 PANTHER PTHR34821 1 149 4.6E-29 T 21-04-2016 APL_RS04845 d93b2049ca2ad3533ebc0b91d9a64c32 150 PANTHER PTHR34821:SF2 1 149 4.6E-29 T 21-04-2016 APL_RS04845 d93b2049ca2ad3533ebc0b91d9a64c32 150 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 142 7.5E-42 T 21-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 35 348 2.9E-32 T 21-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PANTHER PTHR22600 35 346 1.4E-23 T 21-04-2016 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 SUPERFAMILY SSF51445 35 357 2.4E-71 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PRINTS PR00738 Glycosyl hydrolase family 20 signature 54 75 6.53E-15 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PRINTS PR00738 Glycosyl hydrolase family 20 signature 163 181 6.53E-15 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PRINTS PR00738 Glycosyl hydrolase family 20 signature 187 200 6.53E-15 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PRINTS PR00738 Glycosyl hydrolase family 20 signature 117 134 6.53E-15 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 PRINTS PR00738 Glycosyl hydrolase family 20 signature 336 352 6.53E-15 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APL_RS05715 61c6535f858ecdacf064ae07b0a3af0a 377 Gene3D G3DSA:3.20.20.80 34 352 2.3E-58 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 PANTHER PTHR12835 3 252 1.9E-63 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 SUPERFAMILY SSF55681 4 203 1.29E-55 T 21-04-2016 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 Pfam PF02237 Biotin protein ligase C terminal domain 209 252 8.3E-6 T 21-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 SUPERFAMILY SSF50037 206 252 3.98E-9 T 21-04-2016 IPR008988 Transcriptional repressor, C-terminal APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 20 252 9.0E-60 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 Pfam PF03099 Biotin/lipoate A/B protein ligase family 22 145 2.0E-19 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 Gene3D G3DSA:3.30.930.10 6 202 1.3E-55 T 21-04-2016 APL_RS09855 061acafc782dbf456d3b60326aa1d91b 254 Gene3D G3DSA:2.30.30.100 206 253 5.6E-18 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 PANTHER PTHR23151 384 632 1.3E-261 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 PANTHER PTHR23151 120 363 1.3E-261 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Gene3D G3DSA:4.10.320.10 319 364 4.4E-20 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 222 251 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Pfam PF00364 Biotin-requiring enzyme 200 270 1.3E-22 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Pfam PF00364 Biotin-requiring enzyme 3 74 1.3E-21 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Pfam PF00364 Biotin-requiring enzyme 103 172 5.1E-21 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 SUPERFAMILY SSF52777 390 631 5.34E-81 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 SUPERFAMILY SSF51230 2 91 1.3E-20 T 21-04-2016 IPR011053 Single hybrid motif APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 SUPERFAMILY SSF51230 198 291 4.84E-24 T 21-04-2016 IPR011053 Single hybrid motif APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 PANTHER PTHR23151:SF68 384 632 1.3E-261 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 PANTHER PTHR23151:SF68 120 363 1.3E-261 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 401 631 1.9E-80 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 SUPERFAMILY SSF51230 100 191 5.37E-22 T 21-04-2016 IPR011053 Single hybrid motif APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Pfam PF02817 e3 binding domain 323 357 4.0E-14 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Gene3D G3DSA:3.30.559.10 391 632 1.1E-83 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Gene3D G3DSA:2.40.50.100 102 175 2.7E-21 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 188 632 1.9E-213 T 21-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Gene3D G3DSA:2.40.50.100 4 78 3.0E-21 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 Gene3D G3DSA:2.40.50.100 201 275 1.0E-22 T 21-04-2016 APL_RS04040 7adb9f2bdc40a6d22c7678d8575f3624 632 SUPERFAMILY SSF47005 318 361 3.79E-12 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 Gene3D G3DSA:3.80.30.20 51 281 3.2E-31 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 Pfam PF06969 HemN C-terminal domain 361 429 5.2E-11 T 21-04-2016 IPR010723 HemN, C-terminal APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 PANTHER PTHR13932:SF6 1 449 2.9E-246 T 21-04-2016 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 455 2.3E-211 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 SMART SM00729 50 273 2.9E-51 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 PANTHER PTHR13932 1 449 2.9E-246 T 21-04-2016 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 PIRSF PIRSF000167 1 452 6.5E-168 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 SUPERFAMILY SSF102114 4 441 6.54E-145 T 21-04-2016 APL_RS05050 9ce031cd4bb7645bd9a721cc2e83f463 455 Pfam PF04055 Radical SAM superfamily 55 226 9.3E-21 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 TIGRFAM TIGR01933 hflK: HflK protein 90 348 4.8E-118 T 21-04-2016 IPR010201 HflK GO:0016021 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 SMART SM00244 88 248 5.5E-49 T 21-04-2016 IPR001107 Band 7 domain APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 PANTHER PTHR10264:SF51 14 384 1.0E-164 T 21-04-2016 IPR010201 HflK GO:0016021 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 PANTHER PTHR10264 14 384 1.0E-164 T 21-04-2016 IPR001972 Stomatin family GO:0016020 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 Pfam PF12221 Bacterial membrane protein N terminal 1 60 2.2E-8 T 21-04-2016 IPR020980 Menbrane protein HflK, N-terminal APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 SUPERFAMILY SSF117892 121 253 2.22E-23 T 21-04-2016 IPR001107 Band 7 domain APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 PRINTS PR00721 Stomatin signature 95 117 4.5E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 PRINTS PR00721 Stomatin signature 177 194 4.5E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 PRINTS PR00721 Stomatin signature 142 163 4.5E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 Pfam PF01145 SPFH domain / Band 7 family 92 264 6.9E-33 T 21-04-2016 IPR001107 Band 7 domain APL_RS05620 eeb5abfd08bd197af3a09ec21160a345 396 Gene3D G3DSA:1.20.5.620 272 298 5.8E-4 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 SMART SM00411 3 92 4.5E-40 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 SUPERFAMILY SSF47729 3 95 1.77E-31 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 27.727 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 Gene3D G3DSA:4.10.520.10 2 93 1.5E-34 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 1.0E-39 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.1E-30 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 PANTHER PTHR33175:SF2 2 93 3.9E-45 T 21-04-2016 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 PANTHER PTHR33175 2 93 3.9E-45 T 21-04-2016 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.3E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.3E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS03200 e1b71f7e84e7e02b4d2415d70887df40 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.3E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 SUPERFAMILY SSF52540 248 467 1.28E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 PANTHER PTHR24220:SF557 5 379 1.2E-102 T 21-04-2016 APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 PANTHER PTHR24220 5 379 1.2E-102 T 21-04-2016 APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 SUPERFAMILY SSF52540 4 222 2.74E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 Gene3D G3DSA:3.40.50.300 3 230 4.7E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 Gene3D G3DSA:3.40.50.300 251 462 3.3E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 SMART SM00382 280 473 2.5E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 SMART SM00382 28 215 1.9E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 Pfam PF00005 ABC transporter 23 161 3.8E-15 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08425 f06e6feac2a965444f4ec003bb25c5bb 490 Pfam PF00005 ABC transporter 272 423 1.9E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 Gene3D G3DSA:3.40.220.10 1 161 5.1E-64 T 21-04-2016 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 Gene3D G3DSA:3.40.630.10 171 496 5.0E-137 T 21-04-2016 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PANTHER PTHR11963:SF13 7 499 7.8E-248 T 21-04-2016 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 SUPERFAMILY SSF52949 1 184 1.06E-51 T 21-04-2016 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 SUPERFAMILY SSF53187 180 495 8.48E-124 T 21-04-2016 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 9.7E-119 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.799 T 21-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-35 T 21-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APL_RS05745 c101935db124a0a7c088b50cf85a4174 499 PANTHER PTHR11963 7 499 7.8E-248 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.50.40.10 197 392 9.5E-86 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Pfam PF03483 B3/4 domain 212 385 1.1E-71 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.30.56.20 402 475 1.7E-26 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SUPERFAMILY SSF54991 696 794 1.12E-30 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SUPERFAMILY SSF55681 467 690 1.89E-50 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:2.40.50.140 40 154 3.9E-46 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.30.930.10 495 690 4.2E-63 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.099 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 3.7E-20 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SUPERFAMILY SSF56037 195 396 1.31E-77 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Pfam PF01588 Putative tRNA binding domain 45 145 9.5E-27 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 4.2E-280 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.30.56.10 155 184 1.2E-28 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.30.56.10 1 38 1.2E-28 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.1E-29 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SMART SM00896 701 794 5.1E-44 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SUPERFAMILY SSF50249 35 195 1.94E-50 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SUPERFAMILY SSF46955 403 475 1.01E-20 T 21-04-2016 IPR009061 Putative DNA-binding domain APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SMART SM00873 212 385 4.6E-98 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 PANTHER PTHR10947:SF0 2 794 0.0 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 PANTHER PTHR10947 2 794 0.0 T 21-04-2016 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 Gene3D G3DSA:3.30.70.380 703 794 6.5E-31 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APL_RS03195 744c03f493d69aff46974be3644ac6af 795 SMART SM00874 403 471 6.9E-31 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Gene3D G3DSA:3.30.300.10 11 135 1.5E-48 T 21-04-2016 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 PIRSF PIRSF000497 1 381 4.6E-173 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.917 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 1.3E-41 T 21-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 SUPERFAMILY SSF55973 112 232 7.06E-51 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.5E-44 T 21-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Gene3D G3DSA:3.30.300.10 136 233 4.8E-42 T 21-04-2016 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 378 5.7E-199 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 PANTHER PTHR11964 5 376 5.7E-274 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 SUPERFAMILY SSF55973 233 379 1.37E-71 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 8.9E-70 T 21-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 SUPERFAMILY SSF55973 5 109 5.49E-46 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APL_RS05635 2aa6eb676c4ff5e238cc19bb8def15d7 383 Gene3D G3DSA:3.30.300.10 244 379 7.5E-71 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 PANTHER PTHR38418:SF1 2 311 2.7E-45 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 308 1.2E-114 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 Pfam PF01380 SIS domain 37 168 4.0E-31 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 PANTHER PTHR38418 2 311 2.7E-45 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 Gene3D G3DSA:3.40.50.10490 7 190 1.9E-52 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 Pfam PF00571 CBS domain 197 251 1.1E-5 T 21-04-2016 IPR000644 CBS domain APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 Pfam PF00571 CBS domain 263 306 4.0E-5 T 21-04-2016 IPR000644 CBS domain APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 SMART SM00116 204 251 0.0033 T 21-04-2016 IPR000644 CBS domain APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 SMART SM00116 269 311 15.0 T 21-04-2016 IPR000644 CBS domain APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 Gene3D G3DSA:3.10.580.10 191 308 5.3E-30 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 SUPERFAMILY SSF53697 2 274 7.56E-64 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 SUPERFAMILY SSF54631 256 308 1.31E-6 T 21-04-2016 APL_RS01990 7b9b92c540b78b2a7dc4904ed14f5d1a 311 PIRSF PIRSF004692 1 311 1.7E-124 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 PANTHER PTHR16254 7 561 2.7E-215 T 21-04-2016 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 288 2.5E-76 T 21-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 Pfam PF02254 TrkA-N domain 407 518 5.7E-24 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 SUPERFAMILY SSF51735 406 535 1.61E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 PANTHER PTHR16254:SF22 7 561 2.7E-215 T 21-04-2016 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 Pfam PF00999 Sodium/hydrogen exchanger family 14 376 2.3E-63 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APL_RS06180 4fee35a1ec9ef39c9cf7daf0c51c4912 601 Gene3D G3DSA:3.40.50.720 403 536 2.4E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 38 328 36.131 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 PANTHER PTHR30349 45 335 7.9E-145 T 21-04-2016 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 45 330 3.8E-110 T 21-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 SUPERFAMILY SSF47823 43 133 3.53E-11 T 21-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 Gene3D G3DSA:1.10.443.10 149 322 2.4E-55 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 Pfam PF00589 Phage integrase family 147 314 5.9E-52 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 SUPERFAMILY SSF56349 142 326 1.41E-55 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 45 124 9.5E-20 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 Gene3D G3DSA:1.10.150.130 43 134 8.4E-23 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal APL_RS09590 81538f2e66872226fc87dea5ba9fc20c 336 PANTHER PTHR30349:SF17 45 335 7.9E-145 T 21-04-2016 APL_RS05245 46d88dbedfba2e57e8f20f252bae755f 217 PANTHER PTHR33508:SF1 3 216 8.1E-86 T 21-04-2016 APL_RS05245 46d88dbedfba2e57e8f20f252bae755f 217 Pfam PF01914 MarC family integral membrane protein 9 210 2.7E-63 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APL_RS05245 46d88dbedfba2e57e8f20f252bae755f 217 PANTHER PTHR33508 3 216 8.1E-86 T 21-04-2016 APL_RS05245 46d88dbedfba2e57e8f20f252bae755f 217 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 206 9.0E-68 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 ProSitePatterns PS01125 ROK family signature. 132 159 - T 21-04-2016 IPR000600 ROK family APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 PANTHER PTHR18964:SF134 4 304 2.7E-139 T 21-04-2016 APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 Gene3D G3DSA:3.30.420.40 2 134 5.1E-35 T 21-04-2016 APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 Gene3D G3DSA:3.30.420.40 135 281 1.0E-43 T 21-04-2016 APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 Pfam PF00480 ROK family 4 304 8.6E-90 T 21-04-2016 IPR000600 ROK family APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 SUPERFAMILY SSF53067 1 304 2.08E-56 T 21-04-2016 APL_RS02135 0177034c12607cc13b707438aeb0c1e6 305 PANTHER PTHR18964 4 304 2.7E-139 T 21-04-2016 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 PANTHER PTHR30335 2 193 2.4E-124 T 21-04-2016 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 6.2E-60 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.817 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.7E-87 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 PIRSF PIRSF006102 1 193 3.2E-62 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00850 8efe25803120d2effbaa9df4987c3b09 193 PANTHER PTHR30335:SF0 2 193 2.4E-124 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 Pfam PF00117 Glutamine amidotransferase class-I 13 193 9.6E-40 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 Gene3D G3DSA:3.40.50.880 10 195 1.1E-49 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PANTHER PTHR11922 1 196 7.9E-52 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 11 195 3.4E-44 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 SUPERFAMILY SSF52317 11 196 1.41E-43 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 127 139 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 106 114 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 11 25 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-25 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PANTHER PTHR11922:SF7 1 196 7.9E-52 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.1E-11 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 2.1E-11 T 21-04-2016 APL_RS06005 6119bce2e8514f59fe282a367e7446d8 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.1E-11 T 21-04-2016 APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 PANTHER PTHR10534 1 285 6.2E-115 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 Pfam PF08543 Phosphomethylpyrimidine kinase 64 256 5.6E-18 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 5.8E-125 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 PANTHER PTHR10534:SF0 1 285 6.2E-115 T 21-04-2016 APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 SUPERFAMILY SSF53613 1 275 1.71E-72 T 21-04-2016 IPR029056 Ribokinase-like APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 Gene3D G3DSA:3.40.1190.20 1 282 2.4E-89 T 21-04-2016 IPR029056 Ribokinase-like APL_RS07830 7e5a29f2c3b42d2ad230f35847b3b292 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 285 53.426 T 21-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 PANTHER PTHR23502 10 380 5.8E-150 T 21-04-2016 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 Gene3D G3DSA:1.20.1250.20 13 193 2.1E-26 T 21-04-2016 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 2.2E-119 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 Gene3D G3DSA:1.20.1250.20 203 395 4.3E-8 T 21-04-2016 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 Pfam PF07690 Major Facilitator Superfamily 16 357 2.9E-40 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 SUPERFAMILY SSF103473 4 394 3.53E-58 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS01830 84e893489c4447e2e37deae81168c1d0 398 PANTHER PTHR23502:SF39 10 380 5.8E-150 T 21-04-2016 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 PANTHER PTHR32125 3 226 1.4E-75 T 21-04-2016 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 223 31.127 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 220 1.7E-73 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 Gene3D G3DSA:3.90.550.10 2 226 3.2E-71 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 21-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 SUPERFAMILY SSF53448 4 221 1.86E-61 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 222 4.7E-80 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04200 58fd35ba06a79a6ea2d9a3566541c424 228 PANTHER PTHR32125:SF4 3 226 1.4E-75 T 21-04-2016 APL_RS05040 4ab31b8ad179c14e9bb849d64e5d5982 235 PANTHER PTHR34597:SF2 36 232 1.5E-25 T 21-04-2016 APL_RS05040 4ab31b8ad179c14e9bb849d64e5d5982 235 Pfam PF08479 POTRA domain, ShlB-type 106 167 1.1E-13 T 21-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type APL_RS05040 4ab31b8ad179c14e9bb849d64e5d5982 235 Gene3D G3DSA:3.10.20.310 78 167 5.1E-14 T 21-04-2016 APL_RS05040 4ab31b8ad179c14e9bb849d64e5d5982 235 PANTHER PTHR34597 36 232 1.5E-25 T 21-04-2016 APL_RS05040 4ab31b8ad179c14e9bb849d64e5d5982 235 Gene3D G3DSA:3.10.20.310 190 231 1.9E-8 T 21-04-2016 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 PANTHER PTHR10683:SF18 1 315 2.7E-177 T 21-04-2016 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 PANTHER PTHR10683 1 315 2.7E-177 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 Pfam PF00923 Transaldolase 13 310 5.1E-101 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 TIGRFAM TIGR00874 talAB: transaldolase 2 315 1.4E-162 T 21-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 Hamap MF_00492 Transaldolase [tal]. 1 315 51.317 T 21-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 SUPERFAMILY SSF51569 1 314 7.01E-116 T 21-04-2016 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 Gene3D G3DSA:3.20.20.70 1 314 1.7E-131 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00310 e035d90585f025bb03da9b08640c63ae 315 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 SMART SM00387 351 457 5.4E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 SMART SM00388 239 305 1.2E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 4.9E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Pfam PF00672 HAMP domain 167 233 7.8E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423:SF474 180 458 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423:SF474 73 144 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423:SF474 2 7 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 SUPERFAMILY SSF55874 294 458 1.22E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 SUPERFAMILY SSF47384 222 304 2.16E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 451 1.8E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Gene3D G3DSA:1.20.5.1040 6 61 5.3E-12 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Gene3D G3DSA:1.20.5.1040 104 187 2.9E-7 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423 180 458 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423 73 144 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PANTHER PTHR24423 2 7 4.8E-84 T 21-04-2016 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Gene3D G3DSA:1.10.287.130 232 291 4.0E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 4.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 4.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APL_RS05555 4ba33be0ca23d72f595b4112fb0dd9bf 458 Gene3D G3DSA:3.30.565.10 292 456 5.6E-26 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 PANTHER PTHR30175 1 115 1.7E-50 T 21-04-2016 APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 SUPERFAMILY SSF51261 12 164 9.42E-56 T 21-04-2016 IPR011055 Duplicated hybrid motif APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 Gene3D G3DSA:2.70.70.10 11 163 1.1E-59 T 21-04-2016 APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 8.6E-49 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS06945 ee3a2819535cf0ee162ccb93736e509c 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 143 2.2E-49 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS08445 ce03d12696a88c344d708be0432a2636 492 PANTHER PTHR32024 1 492 2.4E-232 T 21-04-2016 APL_RS08445 ce03d12696a88c344d708be0432a2636 492 Pfam PF02386 Cation transport protein 38 484 9.8E-86 T 21-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APL_RS08445 ce03d12696a88c344d708be0432a2636 492 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 475 3.6E-110 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APL_RS08445 ce03d12696a88c344d708be0432a2636 492 PANTHER PTHR32024:SF2 1 492 2.4E-232 T 21-04-2016 APL_RS08445 ce03d12696a88c344d708be0432a2636 492 PIRSF PIRSF006247 1 492 5.1E-162 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 PANTHER PTHR30532 21 302 5.1E-64 T 21-04-2016 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 Pfam PF01497 Periplasmic binding protein 59 278 2.5E-27 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 PANTHER PTHR30532:SF4 21 302 5.1E-64 T 21-04-2016 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 SUPERFAMILY SSF53807 23 287 6.28E-53 T 21-04-2016 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 Gene3D G3DSA:3.40.50.1980 22 148 1.7E-22 T 21-04-2016 APL_RS03720 2f4825f2fba19234b6777019f4f3e7d4 302 Gene3D G3DSA:3.40.50.1980 149 300 1.9E-30 T 21-04-2016 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 249 6.2E-45 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 SUPERFAMILY SSF56601 264 624 6.0E-96 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 SUPERFAMILY SSF56519 67 263 2.88E-49 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 Gene3D G3DSA:3.40.710.10 263 624 4.2E-104 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 PANTHER PTHR30627 15 653 5.5E-251 T 21-04-2016 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 PANTHER PTHR30627:SF2 15 653 5.5E-251 T 21-04-2016 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 Gene3D G3DSA:3.90.1310.10 139 262 3.6E-36 T 21-04-2016 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 29 623 5.0E-233 T 21-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 APL_RS08490 7a7cc7a29d9df6c5da00b42bd7230942 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 281 619 5.3E-79 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PANTHER PTHR19139:SF100 8 256 1.2E-82 T 21-04-2016 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 ProSitePatterns PS00221 MIP family signature. 64 72 - T 21-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PANTHER PTHR19139 8 256 1.2E-82 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 SUPERFAMILY SSF81338 6 252 5.63E-74 T 21-04-2016 IPR023271 Aquaporin-like APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 247 5.2E-66 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 147 165 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 230 250 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 PRINTS PR00783 Major intrinsic protein family signature 180 202 1.4E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 Gene3D G3DSA:1.20.1080.10 2 253 5.4E-81 T 21-04-2016 IPR023271 Aquaporin-like APL_RS01925 dae224bfc181dda68c6c1c6177c7683a 260 Pfam PF00230 Major intrinsic protein 5 247 3.4E-63 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APL_RS08825 b8216f1cc05931a16bb76047f5bb0d75 264 PANTHER PTHR32502 1 261 1.2E-128 T 21-04-2016 APL_RS08825 b8216f1cc05931a16bb76047f5bb0d75 264 PANTHER PTHR32502:SF4 1 261 1.2E-128 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS08825 b8216f1cc05931a16bb76047f5bb0d75 264 Pfam PF03609 PTS system sorbose-specific iic component 4 235 1.5E-77 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS08825 b8216f1cc05931a16bb76047f5bb0d75 264 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 257 1.1E-106 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 Gene3D G3DSA:2.40.100.10 2 168 5.2E-57 T 21-04-2016 IPR029000 Cyclophilin-like domain APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 167 1.3E-50 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 8.2E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.2E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.2E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PANTHER PTHR11071 1 168 7.9E-80 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 21-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PIRSF PIRSF001467 1 168 3.7E-28 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 SUPERFAMILY SSF50891 2 168 1.27E-59 T 21-04-2016 IPR029000 Cyclophilin-like domain APL_RS04775 b20668f7c8147d72615fec61e0e07a38 169 PANTHER PTHR11071:SF192 1 168 7.9E-80 T 21-04-2016 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 PANTHER PTHR24220:SF447 3 247 4.3E-134 T 21-04-2016 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 PANTHER PTHR24220 3 247 4.3E-134 T 21-04-2016 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 Gene3D G3DSA:3.40.50.300 1 244 5.0E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 SMART SM00382 26 220 1.9E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 Pfam PF00005 ABC transporter 17 172 6.2E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 PIRSF PIRSF039085 1 248 3.6E-110 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APL_RS08510 0b1f18616f92b7e0868b5ef5cab3ca1f 249 SUPERFAMILY SSF52540 1 242 2.0E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07215 9647aab08c20f435b543d2a36e91c001 65 PANTHER PTHR37531 2 60 4.7E-19 T 21-04-2016 APL_RS07215 9647aab08c20f435b543d2a36e91c001 65 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 8.6E-20 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APL_RS07215 9647aab08c20f435b543d2a36e91c001 65 PANTHER PTHR37531:SF1 2 60 4.7E-19 T 21-04-2016 APL_RS07215 9647aab08c20f435b543d2a36e91c001 65 Pfam PF04995 Heme exporter protein D (CcmD) 15 57 1.0E-19 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 Gene3D G3DSA:3.40.390.30 4 152 6.3E-51 T 21-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 PANTHER PTHR22881 1 159 2.4E-59 T 21-04-2016 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 SUPERFAMILY SSF55486 22 156 5.13E-50 T 21-04-2016 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 153 24.742 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 21-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 150 2.7E-37 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS03620 4a489e59ca2019b919639fb83263f7a4 163 Pfam PF02130 Uncharacterized protein family UPF0054 24 149 7.3E-40 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APL_RS08305 78081a50a80818c2e0f231396907641c 147 PRINTS PR00369 Flavodoxin signature 6 19 1.5E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS08305 78081a50a80818c2e0f231396907641c 147 PRINTS PR00369 Flavodoxin signature 52 63 1.5E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS08305 78081a50a80818c2e0f231396907641c 147 PRINTS PR00369 Flavodoxin signature 107 126 1.5E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS08305 78081a50a80818c2e0f231396907641c 147 PRINTS PR00369 Flavodoxin signature 83 93 1.5E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APL_RS08305 78081a50a80818c2e0f231396907641c 147 PANTHER PTHR19384:SF81 3 147 1.6E-35 T 21-04-2016 APL_RS08305 78081a50a80818c2e0f231396907641c 147 Pfam PF00258 Flavodoxin 7 136 1.4E-25 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APL_RS08305 78081a50a80818c2e0f231396907641c 147 SUPERFAMILY SSF52218 3 147 1.33E-37 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS08305 78081a50a80818c2e0f231396907641c 147 Gene3D G3DSA:3.40.50.360 3 147 3.3E-36 T 21-04-2016 IPR029039 Flavoprotein-like domain APL_RS08305 78081a50a80818c2e0f231396907641c 147 PANTHER PTHR19384 3 147 1.6E-35 T 21-04-2016 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:3.40.50.300 2 104 2.2E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:3.40.50.300 182 278 2.2E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 PANTHER PTHR11070:SF19 1 655 0.0 T 21-04-2016 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.011 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:3.40.50.300 279 381 1.9E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:3.40.50.300 550 638 1.9E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:1.10.486.10 382 527 2.8E-40 T 21-04-2016 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 SUPERFAMILY SSF52540 1 636 1.24E-164 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 PANTHER PTHR11070 1 655 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Pfam PF13361 UvrD-like helicase C-terminal domain 270 613 3.7E-74 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Gene3D G3DSA:1.10.10.160 108 181 2.4E-23 T 21-04-2016 IPR013986 DExx box DNA helicase domain APL_RS01445 397e452a4e3e0efb5ae6beb26c33fa94 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 266 8.2E-76 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 8.6E-90 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 Gene3D G3DSA:3.30.420.40 255 498 1.1E-105 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 SUPERFAMILY SSF53067 5 255 3.61E-96 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 Gene3D G3DSA:3.30.420.40 1 252 4.1E-107 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 496 1.5E-228 T 21-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 PANTHER PTHR10196:SF9 1 503 7.3E-265 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 PIRSF PIRSF000538 3 502 9.8E-180 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 SUPERFAMILY SSF53067 255 496 7.22E-87 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 58.695 T 21-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 PANTHER PTHR10196 1 503 7.3E-265 T 21-04-2016 APL_RS01930 15cd98e003f8f1a82740f90f762e1569 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 4.7E-63 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 Pfam PF00753 Metallo-beta-lactamase superfamily 12 192 2.5E-29 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 SUPERFAMILY SSF56281 5 209 9.43E-51 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 Gene3D G3DSA:3.60.15.10 8 209 3.7E-51 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 SMART SM00849 13 192 5.7E-32 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 PANTHER PTHR11935 1 209 6.4E-83 T 21-04-2016 APL_RS00640 af51878880bddc1282f2603147a1c3c3 209 PANTHER PTHR11935:SF115 1 209 6.4E-83 T 21-04-2016 APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 PANTHER PTHR34183:SF2 77 174 2.8E-46 T 21-04-2016 APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 PANTHER PTHR34183 77 174 2.8E-46 T 21-04-2016 APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 84 183 5.7E-45 T 21-04-2016 IPR012997 Rare lipoprotein A APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 SUPERFAMILY SSF50685 78 170 2.76E-15 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 Pfam PF03330 Lytic transglycolase 83 170 1.0E-25 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS08480 fe23d55d6caa0be9178d4930a4e9a44c 187 Gene3D G3DSA:2.40.40.10 82 171 1.6E-8 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 PANTHER PTHR18968:SF114 1 568 7.1E-186 T 21-04-2016 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 PIRSF PIRSF004983 1 568 3.8E-171 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 184 7.5E-32 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 562 31.124 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 439 7.8E-138 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 SUPERFAMILY SSF52518 4 196 1.5E-35 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 SUPERFAMILY SSF52518 373 562 4.61E-30 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Gene3D G3DSA:3.40.50.970 5 187 1.0E-43 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 544 1.8E-7 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 PANTHER PTHR18968 1 568 7.1E-186 T 21-04-2016 APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Gene3D G3DSA:3.40.50.970 371 556 1.2E-25 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS09310 f6163bb4776d27b97ed8c7261bd27a01 568 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 397 3.3E-79 T 21-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 Pfam PF00296 Luciferase-like monooxygenase 14 310 6.0E-33 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 Gene3D G3DSA:3.20.20.30 1 342 1.1E-82 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 PANTHER PTHR30137 272 345 1.9E-114 T 21-04-2016 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 PANTHER PTHR30137 1 251 1.9E-114 T 21-04-2016 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 SUPERFAMILY SSF51679 289 342 4.83E-75 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 SUPERFAMILY SSF51679 1 250 4.83E-75 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 PANTHER PTHR30137:SF2 272 345 1.9E-114 T 21-04-2016 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 PANTHER PTHR30137:SF2 1 251 1.9E-114 T 21-04-2016 APL_RS06235 88696b2c81b13bd8c391e9172ac74914 345 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 263 3.9E-105 T 21-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 SUPERFAMILY SSF54211 134 279 6.9E-50 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS00120 e97de2f699020c7137695c41930bf51e 306 SUPERFAMILY SSF54211 3 126 1.44E-40 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS00120 e97de2f699020c7137695c41930bf51e 306 PANTHER PTHR33694 1 306 2.9E-133 T 21-04-2016 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 Gene3D G3DSA:3.30.1700.10 129 284 1.4E-57 T 21-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 2.7E-144 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 277 1.1E-105 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 PANTHER PTHR33694:SF1 1 306 2.9E-133 T 21-04-2016 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 Gene3D G3DSA:3.30.230.20 3 126 4.5E-45 T 21-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APL_RS00120 e97de2f699020c7137695c41930bf51e 306 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 282 48.022 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 SUPERFAMILY SSF53067 3 123 3.84E-32 T 21-04-2016 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 3.0E-128 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 4.9E-135 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 Pfam PF00814 Glycoprotease family 24 312 5.6E-103 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PANTHER PTHR11735 1 341 7.2E-168 T 21-04-2016 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PANTHER PTHR11735:SF6 1 341 7.2E-168 T 21-04-2016 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 63.246 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 SUPERFAMILY SSF53067 101 313 1.2E-44 T 21-04-2016 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 Gene3D G3DSA:3.30.420.40 1 159 9.5E-51 T 21-04-2016 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.2E-52 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS05840 7243d65b985eb08a2925efb81f193a46 347 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 21-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 Gene3D G3DSA:1.10.3370.10 12 434 6.8E-161 T 21-04-2016 IPR023201 SecY subunit domain APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 312 334 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 367 385 1.6E-96 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 SUPERFAMILY SSF103491 14 421 1.83E-130 T 21-04-2016 IPR023201 SecY subunit domain APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PIRSF PIRSF004557 7 437 4.3E-123 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 Pfam PF00344 SecY translocase 75 413 9.2E-114 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 430 28.743 T 21-04-2016 IPR026593 Protein translocase subunit SecY APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 21-04-2016 IPR030659 SecY conserved site APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PANTHER PTHR10906 17 437 2.4E-215 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 PANTHER PTHR10906:SF2 17 437 2.4E-215 T 21-04-2016 APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 21-04-2016 IPR030659 SecY conserved site APL_RS09460 6ed2f1474ab286fc87ce876efc60710f 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 426 2.6E-135 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APL_RS03610 595d8d66be90e38cfec0d00c80a7976a 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.3E-23 T 21-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 APL_RS03610 595d8d66be90e38cfec0d00c80a7976a 81 PANTHER PTHR33359 1 81 5.5E-27 T 21-04-2016 APL_RS03610 595d8d66be90e38cfec0d00c80a7976a 81 Pfam PF02597 ThiS family 4 81 2.8E-22 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APL_RS03610 595d8d66be90e38cfec0d00c80a7976a 81 SUPERFAMILY SSF54285 1 81 1.87E-22 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APL_RS03610 595d8d66be90e38cfec0d00c80a7976a 81 Gene3D G3DSA:3.10.20.30 1 81 2.0E-25 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 28 839 17.446 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Gene3D G3DSA:3.40.50.10050 641 720 1.2E-26 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Pfam PF00009 Elongation factor Tu GTP binding domain 344 501 5.0E-36 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Pfam PF11987 Translation-initiation factor 2 626 731 3.1E-36 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 265 315 1.4E-16 T 21-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 258 841 5.7E-294 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 PANTHER PTHR23115 318 669 4.6E-213 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 PANTHER PTHR23115 694 841 4.6E-213 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Gene3D G3DSA:2.40.30.10 514 605 1.7E-21 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 343 499 1.9E-31 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 SUPERFAMILY SSF50447 515 596 3.53E-24 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 ProSitePatterns PS01176 Initiation factor 2 signature. 792 814 - T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 PANTHER PTHR23115:SF184 318 669 4.6E-213 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 PANTHER PTHR23115:SF184 694 841 4.6E-213 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 SUPERFAMILY SSF50447 743 839 1.34E-34 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Gene3D G3DSA:3.40.50.300 335 500 1.6E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 Gene3D G3DSA:2.40.30.10 743 840 1.8E-39 T 21-04-2016 APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 SUPERFAMILY SSF52540 337 506 6.53E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03345 720e5b6eb5ba72d43dee5b20713881c3 841 SUPERFAMILY SSF52156 618 748 1.96E-37 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 PANTHER PTHR30124:SF0 94 364 1.6E-101 T 21-04-2016 APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 Pfam PF06725 3D domain 288 365 1.1E-24 T 21-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 Gene3D G3DSA:2.40.40.10 179 364 9.7E-44 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 Gene3D G3DSA:2.40.40.10 89 173 5.7E-12 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 SMART SM00925 139 268 1.3E-69 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 SUPERFAMILY SSF50685 49 364 4.19E-106 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 Pfam PF03562 MltA specific insert domain 108 268 1.5E-43 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APL_RS04270 9bbab379881f7a47cba02cd01bcb36b8 365 PANTHER PTHR30124 94 364 1.6E-101 T 21-04-2016 APL_RS05335 edf3bde7251b82ed260d3d97fb58092f 191 SUPERFAMILY SSF51556 2 191 6.8E-74 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS05335 edf3bde7251b82ed260d3d97fb58092f 191 PANTHER PTHR30068:SF4 1 191 3.3E-110 T 21-04-2016 APL_RS05335 edf3bde7251b82ed260d3d97fb58092f 191 Gene3D G3DSA:3.20.20.140 2 191 5.8E-92 T 21-04-2016 APL_RS05335 edf3bde7251b82ed260d3d97fb58092f 191 Pfam PF02614 Glucuronate isomerase 2 190 1.4E-94 T 21-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APL_RS05335 edf3bde7251b82ed260d3d97fb58092f 191 PANTHER PTHR30068 1 191 3.3E-110 T 21-04-2016 APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SUPERFAMILY SSF52821 298 437 4.06E-30 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 PANTHER PTHR11364 131 449 3.2E-87 T 21-04-2016 APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Gene3D G3DSA:3.40.250.10 144 285 3.2E-33 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SUPERFAMILY SSF52821 145 285 5.63E-25 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Gene3D G3DSA:3.40.250.10 296 431 5.9E-25 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SMART SM00450 150 273 2.8E-9 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SMART SM00450 299 427 6.2E-10 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SMART SM00450 26 135 0.0085 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 SUPERFAMILY SSF52821 25 127 1.7E-13 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Gene3D G3DSA:3.40.250.10 11 128 8.2E-13 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 PANTHER PTHR11364:SF15 131 449 3.2E-87 T 21-04-2016 APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Pfam PF00581 Rhodanese-like domain 188 269 8.5E-11 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Pfam PF00581 Rhodanese-like domain 28 124 1.0E-8 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS10830 1781ed28f89a8214604a432f6fb1e456 456 Pfam PF00581 Rhodanese-like domain 308 423 1.9E-11 T 21-04-2016 IPR001763 Rhodanese-like domain APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.5E-91 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 PIRSF PIRSF001435 1 210 8.5E-55 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Gene3D G3DSA:1.10.340.30 23 122 7.0E-35 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 SUPERFAMILY SSF48150 3 207 2.51E-73 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 9.2E-21 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 SMART SM00478 38 185 2.4E-59 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.3E-6 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 PANTHER PTHR10359 1 210 5.3E-94 T 21-04-2016 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 PANTHER PTHR10359:SF18 1 210 5.3E-94 T 21-04-2016 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Gene3D G3DSA:1.10.1670.10 123 208 4.1E-36 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 SMART SM00525 186 206 1.4E-5 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APL_RS04625 c1c216900d0a88482a869e4a0796245c 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.178 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APL_RS10040 dfd61f8da0368a39a8158d8dc1bbb1e5 176 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 6 176 50.252 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS10040 dfd61f8da0368a39a8158d8dc1bbb1e5 176 Pfam PF07977 FabA-like domain 33 162 1.9E-51 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APL_RS10040 dfd61f8da0368a39a8158d8dc1bbb1e5 176 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 9 176 3.2E-92 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS10040 dfd61f8da0368a39a8158d8dc1bbb1e5 176 Gene3D G3DSA:3.10.129.10 8 173 1.0E-57 T 21-04-2016 IPR029069 HotDog domain APL_RS10040 dfd61f8da0368a39a8158d8dc1bbb1e5 176 SUPERFAMILY SSF54637 10 173 6.58E-54 T 21-04-2016 IPR029069 HotDog domain APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 SUPERFAMILY SSF82549 11 355 3.66E-125 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 Gene3D G3DSA:3.40.50.10440 12 182 4.1E-66 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 PANTHER PTHR28629 261 356 1.9E-161 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 PANTHER PTHR28629 1 243 1.9E-161 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 1.1E-145 T 21-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 Gene3D G3DSA:3.30.1180.20 185 355 6.0E-69 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 Pfam PF02733 Dak1 domain 18 351 8.2E-126 T 21-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 PANTHER PTHR28629:SF2 261 356 1.9E-161 T 21-04-2016 APL_RS00440 fbb040939780253a67b7e8d8edd90d48 356 PANTHER PTHR28629:SF2 1 243 1.9E-161 T 21-04-2016 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Pfam PF00270 DEAD/DEAH box helicase 93 242 6.8E-10 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 SUPERFAMILY SSF52540 85 601 7.12E-108 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 PANTHER PTHR18934 739 867 0.0 T 21-04-2016 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 PANTHER PTHR18934 85 702 0.0 T 21-04-2016 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Pfam PF04408 Helicase associated domain (HA2) 472 557 1.0E-16 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Gene3D G3DSA:3.40.50.300 273 424 1.7E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 605 699 2.7E-19 T 21-04-2016 IPR011709 Domain of unknown function DUF1605 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 22 1295 0.0 T 21-04-2016 IPR010222 RNA helicase HrpA GO:0004004 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 SMART SM00490 310 410 1.1E-15 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 SMART SM00487 84 268 1.1E-29 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Gene3D G3DSA:3.40.50.300 86 243 5.7E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Pfam PF11898 Domain of unknown function (DUF3418) 713 1295 7.2E-226 T 21-04-2016 IPR024590 RNA helicase HrpA, C-terminal APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 SMART SM00382 101 390 5.7E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 PANTHER PTHR18934:SF109 739 867 0.0 T 21-04-2016 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 PANTHER PTHR18934:SF109 85 702 0.0 T 21-04-2016 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 SMART SM00847 470 559 1.7E-36 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 APL_RS01880 08203cc6d4162b53ec894709e68d2954 1299 Pfam PF00271 Helicase conserved C-terminal domain 291 409 1.0E-12 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 PANTHER PTHR18895:SF70 43 329 6.1E-121 T 21-04-2016 APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 2 329 43.645 T 21-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 Pfam PF08468 Methyltransferase small domain N-terminal 6 153 5.3E-50 T 21-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 258 264 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 PANTHER PTHR18895 43 329 6.1E-121 T 21-04-2016 APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 SUPERFAMILY SSF53335 147 309 5.18E-28 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 Gene3D G3DSA:3.40.50.150 154 326 2.2E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10625 28fa67e1d4d738ed751cebb4d24e096c 329 Pfam PF05175 Methyltransferase small domain 158 325 4.2E-59 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APL_RS04525 d53e14ce59fec061fff19226cef3ecc8 469 PANTHER PTHR38605:SF1 1 469 1.3E-209 T 21-04-2016 APL_RS04525 d53e14ce59fec061fff19226cef3ecc8 469 PANTHER PTHR38605 1 469 1.3E-209 T 21-04-2016 APL_RS04525 d53e14ce59fec061fff19226cef3ecc8 469 PIRSF PIRSF019381 1 469 2.6E-189 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APL_RS04525 d53e14ce59fec061fff19226cef3ecc8 469 Pfam PF04317 YcjX-like family, DUF463 21 468 2.5E-175 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 Gene3D G3DSA:3.20.20.70 1 268 1.6E-90 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 264 1.1E-103 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 SUPERFAMILY SSF51366 1 267 4.52E-85 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 21-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 266 36.037 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02415 900ab74245971a6a0638b89f65d466fd 269 Pfam PF00290 Tryptophan synthase alpha chain 8 267 1.7E-94 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 Pfam PF01522 Polysaccharide deacetylase 86 253 1.4E-25 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 PANTHER PTHR34216:SF2 25 256 3.9E-73 T 21-04-2016 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 Gene3D G3DSA:3.20.20.370 57 271 1.4E-29 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 303 390 6.0E-37 T 21-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 470 563 1.1E-13 T 21-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 PANTHER PTHR34216 25 256 3.9E-73 T 21-04-2016 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 SUPERFAMILY SSF88713 47 252 1.46E-36 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APL_RS10205 da1b56765cb0a22cedb5a74e8acd4fd0 590 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 27 444 5.0E-170 T 21-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APL_RS04895 9b8e2da213ee658cc10911848167543d 180 SUPERFAMILY SSF160443 90 163 2.22E-10 T 21-04-2016 IPR002625 Smr domain APL_RS04895 9b8e2da213ee658cc10911848167543d 180 SMART SM00463 89 167 3.5E-16 T 21-04-2016 IPR002625 Smr domain APL_RS04895 9b8e2da213ee658cc10911848167543d 180 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 168 38.226 T 21-04-2016 IPR022990 Uncharacterised protein family UPF0115 APL_RS04895 9b8e2da213ee658cc10911848167543d 180 PANTHER PTHR35562 2 177 8.8E-85 T 21-04-2016 APL_RS04895 9b8e2da213ee658cc10911848167543d 180 Pfam PF01713 Smr domain 92 165 3.6E-16 T 21-04-2016 IPR002625 Smr domain APL_RS04895 9b8e2da213ee658cc10911848167543d 180 PANTHER PTHR35562:SF1 2 177 8.8E-85 T 21-04-2016 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 PANTHER PTHR24221 6 613 0.0 T 21-04-2016 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 Pfam PF00005 ABC transporter 380 534 1.3E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 PANTHER PTHR24221:SF203 6 613 0.0 T 21-04-2016 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 SUPERFAMILY SSF52540 354 604 5.66E-90 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 SMART SM00382 389 580 7.9E-21 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 SUPERFAMILY SSF90123 32 345 1.83E-48 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 Gene3D G3DSA:3.40.50.300 363 599 9.2E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 Gene3D G3DSA:1.20.1560.10 32 344 1.3E-33 T 21-04-2016 APL_RS06350 1ae20033b70ed92d973ba80e41e41a71 614 Pfam PF00664 ABC transporter transmembrane region 44 310 2.1E-12 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 SUPERFAMILY SSF141523 285 337 3.92E-19 T 21-04-2016 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 SUPERFAMILY SSF141523 392 443 3.92E-19 T 21-04-2016 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 PANTHER PTHR41533 13 514 1.4E-90 T 21-04-2016 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 Pfam PF03734 L,D-transpeptidase catalytic domain 285 449 4.1E-30 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 Gene3D G3DSA:2.40.440.10 394 443 5.4E-13 T 21-04-2016 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 Gene3D G3DSA:2.40.440.10 284 328 5.4E-13 T 21-04-2016 APL_RS00630 d7d03405a3b5c2425d6ecc3c6ec30776 521 PANTHER PTHR41533:SF1 13 514 1.4E-90 T 21-04-2016 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 PANTHER PTHR21371 1 492 3.6E-198 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.7E-56 T 21-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 487 37.165 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 SUPERFAMILY SSF51735 28 209 6.33E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 SUPERFAMILY SSF48179 210 341 4.76E-39 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 SUPERFAMILY SSF48179 349 486 7.65E-38 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Gene3D G3DSA:3.40.50.720 1 200 3.2E-72 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Gene3D G3DSA:1.10.1040.10 356 483 1.7E-14 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 2.1E-129 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.9E-26 T 21-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS09870 a99218a5f95bb705df1bf32c9115b80c 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 354 484 7.0E-18 T 21-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 PIRSF PIRSF004486 2 313 6.9E-105 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 PANTHER PTHR11265:SF0 7 313 1.3E-148 T 21-04-2016 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 SUPERFAMILY SSF81799 115 216 3.4E-33 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 313 39.098 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 Pfam PF01795 MraW methylase family 7 313 1.1E-120 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 Gene3D G3DSA:1.10.150.170 113 218 4.0E-37 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 SUPERFAMILY SSF53335 216 312 3.28E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 SUPERFAMILY SSF53335 8 114 3.28E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 Gene3D G3DSA:3.40.50.150 8 111 1.7E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 Gene3D G3DSA:3.40.50.150 219 312 1.7E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 312 3.5E-132 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS00050 7a31a1ca39e2684dfffa7abd47fe4638 313 PANTHER PTHR11265 7 313 1.3E-148 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 Gene3D G3DSA:3.40.50.300 1 155 7.6E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 282 40.697 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 SUPERFAMILY SSF52540 1 153 1.82E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 PIRSF PIRSF005052 1 285 2.9E-109 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 Pfam PF03668 P-loop ATPase protein family 1 282 3.9E-130 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 PANTHER PTHR30448 1 284 2.0E-140 T 21-04-2016 APL_RS01725 0e4d18620e056b2c16fa6e5390477ca7 286 PANTHER PTHR30448:SF0 1 284 2.0E-140 T 21-04-2016 APL_RS08850 f174895b7976cb5e7a3cd26cab0e7c2c 171 Pfam PF01202 Shikimate kinase 14 167 1.5E-12 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS08850 f174895b7976cb5e7a3cd26cab0e7c2c 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 167 1.4E-67 T 21-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APL_RS08850 f174895b7976cb5e7a3cd26cab0e7c2c 171 SUPERFAMILY SSF52540 2 168 1.97E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08850 f174895b7976cb5e7a3cd26cab0e7c2c 171 PANTHER PTHR11603 7 171 2.6E-85 T 21-04-2016 APL_RS08850 f174895b7976cb5e7a3cd26cab0e7c2c 171 Gene3D G3DSA:3.40.50.300 4 168 2.4E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 98 2.4E-25 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 SUPERFAMILY SSF54368 3 104 2.09E-30 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 SMART SM01230 105 382 2.2E-147 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 PANTHER PTHR20852:SF15 163 470 7.3E-257 T 21-04-2016 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 PANTHER PTHR20852:SF15 1 141 7.3E-257 T 21-04-2016 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 470 3.6E-210 T 21-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 Pfam PF00120 Glutamine synthetase, catalytic domain 106 469 2.5E-137 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 SUPERFAMILY SSF55931 105 470 1.86E-136 T 21-04-2016 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 21-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 PANTHER PTHR20852 163 470 7.3E-257 T 21-04-2016 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 PANTHER PTHR20852 1 141 7.3E-257 T 21-04-2016 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 Gene3D G3DSA:3.30.590.10 109 458 1.5E-137 T 21-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 262 277 - T 21-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 Gene3D G3DSA:3.10.20.70 3 108 4.1E-34 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS10295 0c8fba1a89f94cd8fef759303a9c2944 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 389 401 - T 21-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APL_RS05275 45f35f3393dd90274fdb47bd5a733454 446 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 64 405 5.9E-123 T 21-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX APL_RS05275 45f35f3393dd90274fdb47bd5a733454 446 PANTHER PTHR38043 29 418 1.6E-83 T 21-04-2016 APL_RS02005 c48b5e3496d358c9e35cc15cb6ec5cf2 312 PANTHER PTHR10361:SF28 12 312 4.5E-97 T 21-04-2016 APL_RS02005 c48b5e3496d358c9e35cc15cb6ec5cf2 312 PANTHER PTHR10361 12 312 4.5E-97 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APL_RS02005 c48b5e3496d358c9e35cc15cb6ec5cf2 312 Pfam PF01758 Sodium Bile acid symporter family 43 220 2.1E-46 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APL_RS05420 068c592ed8020cc3475303663d621db3 274 Pfam PF01226 Formate/nitrite transporter 7 268 1.4E-74 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APL_RS05420 068c592ed8020cc3475303663d621db3 274 PANTHER PTHR30520 237 272 2.7E-95 T 21-04-2016 APL_RS05420 068c592ed8020cc3475303663d621db3 274 PANTHER PTHR30520 2 220 2.7E-95 T 21-04-2016 APL_RS05420 068c592ed8020cc3475303663d621db3 274 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 75 84 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site APL_RS05420 068c592ed8020cc3475303663d621db3 274 Gene3D G3DSA:1.20.1080.10 26 272 4.2E-87 T 21-04-2016 IPR023271 Aquaporin-like APL_RS05420 068c592ed8020cc3475303663d621db3 274 PANTHER PTHR30520:SF4 237 272 2.7E-95 T 21-04-2016 APL_RS05420 068c592ed8020cc3475303663d621db3 274 PANTHER PTHR30520:SF4 2 220 2.7E-95 T 21-04-2016 APL_RS05420 068c592ed8020cc3475303663d621db3 274 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 6 271 3.5E-129 T 21-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 APL_RS05420 068c592ed8020cc3475303663d621db3 274 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site APL_RS05420 068c592ed8020cc3475303663d621db3 274 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 18 271 1.1E-87 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 193 381 6.4E-14 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 482 659 1.1E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 PANTHER PTHR30183:SF7 121 664 7.2E-277 T 21-04-2016 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 Gene3D G3DSA:1.10.3720.10 411 664 2.2E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 Gene3D G3DSA:1.10.3720.10 134 385 3.7E-40 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 SUPERFAMILY SSF161098 416 655 2.8E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 SUPERFAMILY SSF161098 139 379 1.44E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02965 5d0583d43da22a3bead00a0a3d63772b 666 PANTHER PTHR30183 121 664 7.2E-277 T 21-04-2016 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 SUPERFAMILY SSF53659 2 358 2.52E-124 T 21-04-2016 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 358 51.202 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 3.6E-139 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 PANTHER PTHR11835:SF35 1 358 4.8E-203 T 21-04-2016 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 Gene3D G3DSA:3.40.718.10 2 358 5.6E-134 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 1.5E-173 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 21-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 PANTHER PTHR11835 1 358 4.8E-203 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APL_RS02225 6c405f359dff620f9a018c1232004c72 360 SMART SM01329 5 354 1.1E-203 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APL_RS06395 175d2debda19b2bd906192132788f909 116 PANTHER PTHR34874:SF2 2 116 3.7E-54 T 21-04-2016 APL_RS06395 175d2debda19b2bd906192132788f909 116 Gene3D G3DSA:3.40.1260.10 1 116 1.3E-39 T 21-04-2016 IPR027396 DsrEFH-like APL_RS06395 175d2debda19b2bd906192132788f909 116 SUPERFAMILY SSF75169 1 116 1.7E-32 T 21-04-2016 IPR027396 DsrEFH-like APL_RS06395 175d2debda19b2bd906192132788f909 116 PANTHER PTHR34874 2 116 3.7E-54 T 21-04-2016 APL_RS06395 175d2debda19b2bd906192132788f909 116 Pfam PF02635 DsrE/DsrF-like family 2 116 1.1E-22 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APL_RS09670 659968bdd2932f535f9eff876b345326 77 SUPERFAMILY SSF47336 3 75 1.7E-24 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain APL_RS09670 659968bdd2932f535f9eff876b345326 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site APL_RS09670 659968bdd2932f535f9eff876b345326 77 PANTHER PTHR20863 3 72 7.4E-31 T 21-04-2016 APL_RS09670 659968bdd2932f535f9eff876b345326 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 9.1E-37 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APL_RS09670 659968bdd2932f535f9eff876b345326 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 1.9E-17 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain APL_RS09670 659968bdd2932f535f9eff876b345326 77 Gene3D G3DSA:1.10.1200.10 2 74 8.1E-36 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain APL_RS09670 659968bdd2932f535f9eff876b345326 77 SMART SM00823 Phosphopantetheine attachment site 4 62 0.0092 T 21-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 APL_RS09670 659968bdd2932f535f9eff876b345326 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 22.709 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PANTHER PTHR11777:SF9 1 874 0.0 T 21-04-2016 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 SUPERFAMILY SSF55186 553 713 9.68E-50 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.8E-32 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.8E-32 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.8E-32 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.8E-32 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.8E-32 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 SUPERFAMILY SSF101353 255 464 2.22E-59 T 21-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 Gene3D G3DSA:3.30.930.10 3 250 5.4E-125 T 21-04-2016 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 SUPERFAMILY SSF50447 453 551 5.65E-20 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 SUPERFAMILY SSF55681 3 254 2.49E-107 T 21-04-2016 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 853 0.0 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 201.875 T 21-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 Pfam PF01411 tRNA synthetases class II (A) 6 553 1.4E-230 T 21-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 SMART SM00863 652 695 6.1E-20 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 Pfam PF02272 DHHA1 domain 799 868 9.7E-16 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 PANTHER PTHR11777 1 874 0.0 T 21-04-2016 APL_RS03420 5daf0f738b71223a7eb76cdd0a9988c9 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.8E-17 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 21-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PANTHER PTHR35177 1 84 1.4E-25 T 21-04-2016 APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.1E-20 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-20 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.1E-20 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.1E-20 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 Pfam PF01455 HupF/HypC family 1 72 2.0E-25 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 79 4.9E-26 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 PANTHER PTHR35177:SF2 1 84 1.4E-25 T 21-04-2016 APL_RS07010 04ecc03bfd4eb9ba6854a86ea3960ab7 92 SUPERFAMILY SSF159127 1 83 2.49E-24 T 21-04-2016 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 PANTHER PTHR30634:SF11 1 210 3.8E-53 T 21-04-2016 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 209 2.2E-57 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 210 27.78 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 PANTHER PTHR30634 1 210 3.8E-53 T 21-04-2016 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 SUPERFAMILY SSF89392 40 209 8.24E-53 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 Pfam PF03550 Outer membrane lipoprotein LolB 54 208 2.8E-37 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APL_RS04065 191e886c4cf7e968f87ba3557c4b2bd0 210 Gene3D G3DSA:2.50.20.10 13 209 7.4E-56 T 21-04-2016 APL_RS01605 d846f01517dd26ec62ac7732d6bbd0ba 248 Gene3D G3DSA:3.40.50.720 2 246 1.8E-75 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS01605 d846f01517dd26ec62ac7732d6bbd0ba 248 SUPERFAMILY SSF69572 2 246 2.09E-83 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS01605 d846f01517dd26ec62ac7732d6bbd0ba 248 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 7 246 8.3E-131 T 21-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 APL_RS01605 d846f01517dd26ec62ac7732d6bbd0ba 248 Pfam PF00899 ThiF family 11 243 5.3E-63 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS01605 d846f01517dd26ec62ac7732d6bbd0ba 248 PANTHER PTHR10953 2 246 3.2E-83 T 21-04-2016 APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 SMART SM00382 31 207 0.0015 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 Gene3D G3DSA:3.40.50.300 3 204 1.0E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 SUPERFAMILY SSF52540 7 197 1.66E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 7 206 2.0E-75 T 21-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 PANTHER PTHR24220:SF508 8 194 3.1E-86 T 21-04-2016 APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 Pfam PF00005 ABC transporter 23 163 1.0E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07230 97d22a7be0036cb70cf38136b44d6c48 211 PANTHER PTHR24220 8 194 3.1E-86 T 21-04-2016 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 Gene3D G3DSA:3.40.50.450 3 218 1.1E-76 T 21-04-2016 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 Pfam PF00365 Phosphofructokinase 7 280 1.4E-107 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 ProSitePatterns PS00433 Phosphofructokinase signature. 248 266 - T 21-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PANTHER PTHR13697 4 310 9.0E-133 T 21-04-2016 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 6.4E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 324 46.114 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 PIRSF PIRSF000532 4 324 1.3E-126 T 21-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 SUPERFAMILY SSF53784 3 314 2.88E-116 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APL_RS05860 8c64742b214531d11333a65ff74cc49c 324 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 305 9.8E-126 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS08225 750d5ed5bf114e504887af93852eaa62 416 PANTHER PTHR30250:SF9 1 416 2.7E-90 T 21-04-2016 APL_RS08225 750d5ed5bf114e504887af93852eaa62 416 Pfam PF13440 Polysaccharide biosynthesis protein 38 331 1.9E-10 T 21-04-2016 APL_RS08225 750d5ed5bf114e504887af93852eaa62 416 PANTHER PTHR30250 1 416 2.7E-90 T 21-04-2016 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 PANTHER PTHR12789 3 103 1.0E-34 T 21-04-2016 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 Gene3D G3DSA:3.30.780.10 23 103 1.4E-33 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 Pfam PF01253 Translation initiation factor SUI1 27 97 2.2E-17 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 SUPERFAMILY SSF55159 3 99 1.57E-24 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 4.8E-37 T 21-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APL_RS03825 0a9c68b93a6bdeef4cd36f95938e7e23 103 PIRSF PIRSF037511 1 103 1.2E-32 T 21-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 SUPERFAMILY SSF89155 4 200 5.76E-51 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 1 201 39.11 T 21-04-2016 IPR028611 Tat proofreading chaperone DmsD GO:0005048 APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 Pfam PF02613 Nitrate reductase delta subunit 43 158 8.4E-21 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 PANTHER PTHR34227:SF5 1 201 2.5E-63 T 21-04-2016 APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 PIRSF PIRSF004690 1 201 6.1E-64 T 21-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 Gene3D G3DSA:1.10.3480.10 2 201 5.4E-55 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS08905 cfa76b9b62862ca60696d5d34e907abf 201 PANTHER PTHR34227 1 201 2.5E-63 T 21-04-2016 APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 117 6.5E-31 T 21-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 SUPERFAMILY SSF48452 164 270 9.01E-20 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 Gene3D G3DSA:1.25.40.10 206 288 2.1E-27 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 PANTHER PTHR30009 135 293 1.7E-12 T 21-04-2016 APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 PANTHER PTHR30009:SF10 135 293 1.7E-12 T 21-04-2016 APL_RS08010 5b112c2799500a8c64af61ec531f0cfb 304 Gene3D G3DSA:1.25.40.10 160 205 7.9E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 3 390 85.316 T 21-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 PANTHER PTHR11061:SF36 13 391 1.5E-209 T 21-04-2016 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 322 353 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 SUPERFAMILY SSF53335 4 389 2.24E-56 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 372 382 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 PANTHER PTHR11061 13 391 1.5E-209 T 21-04-2016 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 4 389 4.6E-180 T 21-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 216 389 1.2E-14 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APL_RS05800 d58fe2e50ceebc9726661c949ca6df0f 391 Gene3D G3DSA:3.40.50.150 186 387 2.3E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 TIGRFAM TIGR01388 rnd: ribonuclease D 9 369 3.2E-125 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 Hamap MF_01899 Ribonuclease D [rnd]. 7 369 42.136 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 Pfam PF00570 HRDC domain 217 280 5.5E-11 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 PANTHER PTHR12124:SF42 3 363 1.7E-75 T 21-04-2016 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 SUPERFAMILY SSF53098 6 213 7.59E-67 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 PANTHER PTHR12124 3 363 1.7E-75 T 21-04-2016 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 SUPERFAMILY SSF47819 298 368 8.37E-17 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 SUPERFAMILY SSF47819 202 302 2.78E-27 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 Gene3D G3DSA:3.30.420.10 6 183 1.3E-12 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 SMART SM00474 7 175 3.9E-40 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APL_RS03230 2ea1c94dbd4e14b0ccb94e44c15bfa38 371 Pfam PF01612 3'-5' exonuclease 7 174 2.6E-39 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 SUPERFAMILY SSF52096 26 284 1.99E-90 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 Gene3D G3DSA:3.90.226.10 19 285 2.7E-79 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 3.3E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 3.3E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 3.3E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 3.3E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 3.3E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PANTHER PTHR22855:SF17 1 296 1.3E-171 T 21-04-2016 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 38.056 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 Pfam PF01039 Carboxyl transferase domain 98 241 5.4E-16 T 21-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.5E-145 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APL_RS03300 0e677b7f1e3bb9fc83ae6e4edff2cb2c 297 PANTHER PTHR22855 1 296 1.3E-171 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site APL_RS00340 ea983780babef43e347fa3a22616df72 531 Gene3D G3DSA:3.90.76.10 34 210 1.4E-42 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 Gene3D G3DSA:3.10.105.10 284 499 9.5E-71 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 PANTHER PTHR30290:SF14 24 530 3.0E-199 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 PANTHER PTHR30290 24 530 3.0E-199 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 PIRSF PIRSF002741 16 531 4.0E-123 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS00340 ea983780babef43e347fa3a22616df72 531 SUPERFAMILY SSF53850 24 527 3.1E-155 T 21-04-2016 APL_RS00340 ea983780babef43e347fa3a22616df72 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 446 1.7E-104 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 PANTHER PTHR22854 1 292 3.6E-127 T 21-04-2016 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Gene3D G3DSA:3.20.20.70 269 461 3.7E-58 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 SUPERFAMILY SSF51366 15 264 2.12E-75 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 21-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 264 33.398 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 265 469 28.968 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 267 463 5.6E-56 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 SUPERFAMILY SSF51366 267 464 1.4E-49 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 PANTHER PTHR22854:SF2 1 292 3.6E-127 T 21-04-2016 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 261 4.1E-91 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APL_RS04495 8d434e1706944d9dd57875e38f1c65de 469 Gene3D G3DSA:3.20.20.70 5 268 2.7E-97 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS06450 3f3c2a03b0521d9a2a54901ec11db5d0 422 SUPERFAMILY SSF56935 24 378 1.69E-118 T 21-04-2016 APL_RS06450 3f3c2a03b0521d9a2a54901ec11db5d0 422 Gene3D G3DSA:2.40.170.10 24 377 4.3E-134 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APL_RS06450 3f3c2a03b0521d9a2a54901ec11db5d0 422 Pfam PF02264 LamB porin 26 377 5.8E-117 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APL_RS06450 3f3c2a03b0521d9a2a54901ec11db5d0 422 PANTHER PTHR38762 1 377 4.6E-126 T 21-04-2016 APL_RS06450 3f3c2a03b0521d9a2a54901ec11db5d0 422 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 377 1.0E-156 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Gene3D G3DSA:2.40.30.10 209 298 7.7E-37 T 21-04-2016 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 21-04-2016 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PANTHER PTHR23115:SF151 1 393 7.9E-298 T 21-04-2016 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 PANTHER PTHR23115 1 393 7.9E-298 T 21-04-2016 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Gene3D G3DSA:2.40.30.10 300 393 2.3E-47 T 21-04-2016 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.124 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Gene3D G3DSA:3.40.50.300 3 208 4.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 SUPERFAMILY SSF52540 6 219 2.22E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 SUPERFAMILY SSF50447 205 301 1.57E-29 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 394 6.7E-238 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-17 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 SUPERFAMILY SSF50465 298 393 2.45E-36 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APL_RS07395 c9e143b3e4997bc7238ab091c7fa6273 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.4E-34 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APL_RS03725 f359ebbb93696fc510a633a822158212 315 PANTHER PTHR30472 1 315 5.5E-122 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS03725 f359ebbb93696fc510a633a822158212 315 Pfam PF01032 FecCD transport family 12 312 1.2E-68 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS03725 f359ebbb93696fc510a633a822158212 315 Gene3D G3DSA:1.10.3470.10 5 314 4.4E-72 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS03725 f359ebbb93696fc510a633a822158212 315 PANTHER PTHR30472:SF27 1 315 5.5E-122 T 21-04-2016 APL_RS03725 f359ebbb93696fc510a633a822158212 315 SUPERFAMILY SSF81345 5 312 8.89E-66 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Gene3D G3DSA:3.30.70.20 105 139 9.5E-12 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Gene3D G3DSA:3.30.70.20 31 104 1.8E-35 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Gene3D G3DSA:3.30.70.20 174 228 1.8E-35 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Pfam PF09163 Formate dehydrogenase N, transmembrane 247 289 6.4E-19 T 21-04-2016 IPR015246 Formate dehydrogenase, transmembrane APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 PIRSF PIRSF036298 1 299 5.2E-159 T 21-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 SUPERFAMILY SSF54862 30 280 4.08E-69 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 PANTHER PTHR11938:SF84 3 216 2.6E-123 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Gene3D G3DSA:1.20.5.480 248 294 9.0E-21 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 9 291 3.7E-155 T 21-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Pfam PF13247 4Fe-4S dicluster domain 93 189 1.7E-25 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 Gene3D G3DSA:3.30.70.20 140 173 1.3E-16 T 21-04-2016 APL_RS04665 b6668edd4046b1de84af0d7ba576bb3b 299 PANTHER PTHR11938 3 216 2.6E-123 T 21-04-2016 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 PANTHER PTHR23083 41 135 2.3E-13 T 21-04-2016 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 181 4.8E-59 T 21-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 Pfam PF13181 Tetratricopeptide repeat 79 104 0.059 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 Gene3D G3DSA:1.25.40.10 37 122 1.1E-16 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 SUPERFAMILY SSF48452 39 168 7.17E-19 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 SMART SM00028 107 140 22.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 SMART SM00028 73 106 11.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 SMART SM00028 39 72 4.4E-4 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS06640 f16d868f2e96799f0485cc947b9ae1af 182 Gene3D G3DSA:1.25.40.10 123 173 1.1E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 Gene3D G3DSA:3.90.80.10 4 174 6.5E-60 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 PANTHER PTHR10286 5 175 1.8E-76 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 SUPERFAMILY SSF50324 4 175 5.1E-66 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.682 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS10090 e59b0f4a128add7f54a97d51fa1030b0 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 6.9E-53 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 SUPERFAMILY SSF46785 551 607 2.3E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Gene3D G3DSA:3.40.50.300 3 174 6.0E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 PANTHER PTHR23115:SF129 1 354 8.4E-122 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 PANTHER PTHR23115:SF129 404 564 8.4E-122 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Gene3D G3DSA:2.40.30.10 175 289 2.6E-23 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 SUPERFAMILY SSF52540 2 161 2.8E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 SUPERFAMILY SSF50447 167 253 2.16E-18 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 2.9E-194 T 21-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 PANTHER PTHR23115 1 354 8.4E-122 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 PANTHER PTHR23115 404 564 8.4E-122 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Gene3D G3DSA:1.10.10.10 412 479 3.2E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 SUPERFAMILY SSF46785 413 483 1.22E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Pfam PF09107 Elongation factor SelB, winged helix 560 605 7.9E-15 T 21-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 156 1.4E-12 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Pfam PF09106 Elongation factor SelB, winged helix 423 478 6.3E-13 T 21-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Pfam PF00009 Elongation factor Tu GTP binding domain 3 161 8.8E-30 T 21-04-2016 APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 Gene3D G3DSA:1.10.10.10 548 607 1.6E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08290 d6b87dcf089926de8a665c5a9c389288 611 SUPERFAMILY SSF50465 270 352 6.12E-7 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 PANTHER PTHR35891:SF2 1 212 1.9E-79 T 21-04-2016 APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 PANTHER PTHR35891 1 212 1.9E-79 T 21-04-2016 APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 Pfam PF01323 DSBA-like thioredoxin domain 47 184 1.3E-24 T 21-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 Gene3D G3DSA:3.40.30.10 30 212 2.4E-59 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 SUPERFAMILY SSF52833 26 201 2.61E-44 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS09940 3430877445429d369433a4c5bd3efbf8 212 PIRSF PIRSF001488 1 212 1.2E-69 T 21-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 142 6.0E-70 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 SUPERFAMILY SSF52304 3 145 2.09E-63 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 PANTHER PTHR21272 1 149 1.1E-93 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 154 73.297 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 PIRSF PIRSF001399 1 146 2.5E-64 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 Gene3D G3DSA:3.40.50.9100 1 144 2.9E-70 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 Pfam PF01220 Dehydroquinase class II 3 139 9.2E-63 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 7.4E-65 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS09910 85e4cb87278d89456e151d8c5e80f557 154 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 21-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 PANTHER PTHR11138 4 309 4.2E-114 T 21-04-2016 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 Gene3D G3DSA:3.10.25.10 209 309 3.2E-31 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 SUPERFAMILY SSF50486 207 312 3.14E-29 T 21-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 309 37.268 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 SUPERFAMILY SSF53328 2 206 2.22E-67 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 Gene3D G3DSA:3.40.50.170 3 207 4.7E-75 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 21-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 Pfam PF00551 Formyl transferase 6 183 1.3E-53 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 Pfam PF02911 Formyl transferase, C-terminal domain 206 306 1.9E-27 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS08430 b0115fd7e0be0de9aaea6ae994ddf6e4 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 312 1.5E-103 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 1.8E-86 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 408 1.9E-188 T 21-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Pfam PF02817 e3 binding domain 117 148 5.1E-10 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 SUPERFAMILY SSF47005 108 152 1.31E-10 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 PANTHER PTHR23151:SF47 3 409 8.1E-243 T 21-04-2016 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 SUPERFAMILY SSF52777 179 408 8.9E-94 T 21-04-2016 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 SUPERFAMILY SSF51230 1 83 5.89E-24 T 21-04-2016 IPR011053 Single hybrid motif APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 PANTHER PTHR23151 3 409 8.1E-243 T 21-04-2016 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Gene3D G3DSA:4.10.320.10 117 156 1.2E-17 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Gene3D G3DSA:3.30.559.10 172 407 7.6E-96 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Gene3D G3DSA:2.40.50.100 1 87 4.3E-25 T 21-04-2016 APL_RS02335 ad991aec6e310d8c0b74c4521562557e 409 Pfam PF00364 Biotin-requiring enzyme 4 76 2.1E-19 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 Gene3D G3DSA:3.40.50.150 98 286 2.0E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.99 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 PANTHER PTHR18895:SF69 16 292 1.4E-165 T 21-04-2016 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 PIRSF PIRSF000401 1 293 4.1E-96 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 7.3E-121 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 2.1E-105 T 21-04-2016 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 PANTHER PTHR18895 16 292 1.4E-165 T 21-04-2016 APL_RS08120 d4181b6d9a33520a65978a31d49ab466 293 SUPERFAMILY SSF53335 65 286 3.67E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 397 1.5E-129 T 21-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PANTHER PTHR13789:SF214 3 398 6.2E-134 T 21-04-2016 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 SUPERFAMILY SSF51905 274 388 4.0E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 SUPERFAMILY SSF51905 4 185 4.0E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 Pfam PF01494 FAD binding domain 5 353 4.4E-19 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 Gene3D G3DSA:3.50.50.60 4 190 7.7E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 Gene3D G3DSA:3.50.50.60 275 363 7.7E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 301 314 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 397 7.7E-115 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PANTHER PTHR13789 3 398 6.2E-134 T 21-04-2016 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 8.7E-14 T 21-04-2016 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 8.7E-14 T 21-04-2016 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 179 8.7E-14 T 21-04-2016 APL_RS01700 94c09af56c3b6f7388ec551e1268c33b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.7E-14 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Pfam PF13500 AAA domain 3 229 2.4E-52 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 SUPERFAMILY SSF53659 392 709 7.81E-95 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 PANTHER PTHR23406 178 711 8.8E-57 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Gene3D G3DSA:3.40.1390.20 224 365 1.2E-28 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.1E-138 T 21-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 PANTHER PTHR23406:SF3 178 711 8.8E-57 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Gene3D G3DSA:3.40.50.300 2 223 7.1E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 SUPERFAMILY SSF52540 1 239 1.36E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 PIRSF PIRSF006107 1 712 0.0 T 21-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Gene3D G3DSA:3.40.50.10750 524 682 2.1E-68 T 21-04-2016 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 3.4E-128 T 21-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 Pfam PF07085 DRTGG domain 233 344 3.7E-27 T 21-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APL_RS03370 cb5d78f4789ddbb638cdf87226b01a19 712 SUPERFAMILY SSF75138 229 353 7.46E-24 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APL_RS04745 b13a81422046664e2dfd7009513b5251 294 Gene3D G3DSA:1.10.10.10 7 86 8.6E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04745 b13a81422046664e2dfd7009513b5251 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 Pfam PF03466 LysR substrate binding domain 91 294 8.3E-35 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS04745 b13a81422046664e2dfd7009513b5251 294 PANTHER PTHR30537:SF1 1 294 7.2E-127 T 21-04-2016 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 SUPERFAMILY SSF46785 6 91 1.0E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04745 b13a81422046664e2dfd7009513b5251 294 PANTHER PTHR30537 1 294 7.2E-127 T 21-04-2016 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 8.9E-23 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 SUPERFAMILY SSF53850 93 294 3.8E-37 T 21-04-2016 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 Gene3D G3DSA:3.40.190.10 93 178 2.8E-6 T 21-04-2016 APL_RS04745 b13a81422046664e2dfd7009513b5251 294 Gene3D G3DSA:3.40.190.10 179 264 7.1E-19 T 21-04-2016 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 SUPERFAMILY SSF52540 119 235 1.54E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 SUPERFAMILY SSF52540 2 92 1.54E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 SMART SM00382 26 223 3.7E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 SMART SM00382 337 501 2.4E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 Pfam PF00005 ABC transporter 328 459 1.1E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 Pfam PF00005 ABC transporter 17 178 2.0E-23 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 PANTHER PTHR19211:SF49 1 560 0.0 T 21-04-2016 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 Gene3D G3DSA:3.40.50.300 311 527 1.7E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 Gene3D G3DSA:3.40.50.300 4 265 3.3E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 SUPERFAMILY SSF52540 294 515 3.38E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 PANTHER PTHR19211 1 560 0.0 T 21-04-2016 APL_RS01590 8ba18b194cb2ebdfba02d1092f8024d4 638 Pfam PF12848 ABC transporter 217 295 3.1E-28 T 21-04-2016 IPR032781 ABC-transporter extension domain APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 Pfam PF02872 5'-nucleotidase, C-terminal domain 365 560 6.8E-26 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 Pfam PF00149 Calcineurin-like phosphoesterase 34 270 1.1E-15 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 Gene3D G3DSA:3.60.21.10 27 363 1.6E-89 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PANTHER PTHR11575 1 657 1.5E-292 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 Gene3D G3DSA:3.90.780.10 365 607 1.4E-44 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PANTHER PTHR11575:SF6 1 657 1.5E-292 T 21-04-2016 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 ProSitePatterns PS00786 5'-nucleotidase signature 2. 119 130 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 439 462 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 32 50 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 253 276 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 293 313 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 541 560 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 PRINTS PR01607 Apyrase family signature 225 242 9.6E-29 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 SUPERFAMILY SSF56300 30 364 4.1E-83 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 33 658 0.0 T 21-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 APL_RS03380 db3e8f25b11c64b6f3d519f05c3cc2b1 658 SUPERFAMILY SSF55816 365 608 3.01E-40 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PANTHER PTHR24322 6 132 7.4E-84 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PANTHER PTHR24322 148 180 7.4E-84 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.6E-22 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 Gene3D G3DSA:3.40.50.720 2 234 6.8E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PANTHER PTHR24322:SF392 6 132 7.4E-84 T 21-04-2016 APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PANTHER PTHR24322:SF392 148 180 7.4E-84 T 21-04-2016 APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.4E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.4E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.4E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 SUPERFAMILY SSF51735 1 225 1.86E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02405 3a1556fd713eed98013ef01f41d8d160 249 Pfam PF00106 short chain dehydrogenase 2 188 6.0E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS07305 6ef8f24abb8caabec732bb178f4236bf 177 PANTHER PTHR33219:SF5 8 174 1.3E-37 T 21-04-2016 APL_RS07305 6ef8f24abb8caabec732bb178f4236bf 177 PANTHER PTHR33219 8 174 1.3E-37 T 21-04-2016 APL_RS07305 6ef8f24abb8caabec732bb178f4236bf 177 Pfam PF02325 YGGT family 10 76 1.3E-11 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 APL_RS07305 6ef8f24abb8caabec732bb178f4236bf 177 Pfam PF02325 YGGT family 98 165 3.1E-15 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 SUPERFAMILY SSF141734 3 107 4.58E-45 T 21-04-2016 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 SUPERFAMILY SSF101386 112 200 7.85E-26 T 21-04-2016 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 110 196 19.285 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 50 100 9.0E-24 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 2 201 37.523 T 21-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 114 196 7.2E-31 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 115 200 3.5E-18 T 21-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 PANTHER PTHR21256:SF16 1 208 1.5E-111 T 21-04-2016 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 27 100 8.5E-32 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APL_RS10745 708335ae2510f98cb1d6997982d53581 212 PANTHER PTHR21256 1 208 1.5E-111 T 21-04-2016 APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 SUPERFAMILY SSF52540 3 237 2.2E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 PANTHER PTHR24220 5 239 2.7E-113 T 21-04-2016 APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 Pfam PF00005 ABC transporter 21 167 2.3E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 SMART SM00382 28 215 1.7E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 PIRSF PIRSF039085 1 242 1.0E-96 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 Gene3D G3DSA:3.40.50.300 2 238 3.1E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08985 350bd4c4c424733f565a55fd36f8c23e 243 PANTHER PTHR24220:SF447 5 239 2.7E-113 T 21-04-2016 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 PANTHER PTHR33280 1 66 2.4E-40 T 21-04-2016 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.0E-36 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 SUPERFAMILY SSF143800 1 66 2.0E-29 T 21-04-2016 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 Pfam PF01197 Ribosomal protein L31 1 64 2.7E-32 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.813 T 21-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 5.7E-24 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.7E-24 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 5.7E-24 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS05145 14833ed8d99ca3820e7c5d7408335911 70 PANTHER PTHR33280:SF2 1 66 2.4E-40 T 21-04-2016 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Gene3D G3DSA:2.60.40.10 116 223 4.4E-39 T 21-04-2016 IPR013783 Immunoglobulin-like fold APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Gene3D G3DSA:2.60.40.10 18 108 5.6E-8 T 21-04-2016 IPR013783 Immunoglobulin-like fold APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 SUPERFAMILY SSF51445 232 625 1.53E-111 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Pfam PF00128 Alpha amylase, catalytic domain 276 350 1.2E-12 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 112 727 9.4E-288 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 SUPERFAMILY SSF51011 627 729 8.09E-34 T 21-04-2016 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 SUPERFAMILY SSF81296 21 117 3.5E-11 T 21-04-2016 IPR014756 Immunoglobulin E-set APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 SUPERFAMILY SSF81296 120 226 1.75E-33 T 21-04-2016 IPR014756 Immunoglobulin E-set APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Gene3D G3DSA:3.20.20.80 242 615 1.4E-91 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 PANTHER PTHR10357:SF158 52 729 0.0 T 21-04-2016 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Gene3D G3DSA:2.60.40.1180 627 727 1.3E-35 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 632 728 2.4E-22 T 21-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 SMART SM00642 250 600 1.6E-7 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 PIRSF PIRSF000463 10 740 4.3E-277 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 730 42.32 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 PANTHER PTHR10357 52 729 0.0 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APL_RS01785 9ea0f9a79dc6e9fd3713f228524fb2c2 777 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 210 2.9E-23 T 21-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 SUPERFAMILY SSF75620 12 353 4.58E-141 T 21-04-2016 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 Pfam PF03462 PCRF domain 13 203 5.5E-77 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 PANTHER PTHR11075 1 356 3.1E-186 T 21-04-2016 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 Gene3D G3DSA:1.20.58.410 7 93 2.4E-22 T 21-04-2016 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 1.2E-176 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 SMART SM00937 63 178 3.1E-64 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 Pfam PF00472 RF-1 domain 216 321 1.4E-42 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.171 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 PANTHER PTHR11075:SF9 1 356 3.1E-186 T 21-04-2016 APL_RS10825 01ea1b8f973038ab77cc7a207357d98f 360 Gene3D G3DSA:3.30.160.20 213 289 6.1E-37 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 PANTHER PTHR20858 6 169 1.8E-63 T 21-04-2016 APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 Pfam PF03070 TENA/THI-4/PQQC family 5 204 2.8E-57 T 21-04-2016 IPR004305 Thiaminase-2/PQQC APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 PANTHER PTHR20858:SF17 6 169 1.8E-63 T 21-04-2016 APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 SUPERFAMILY SSF48613 4 202 1.47E-66 T 21-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 4 204 8.7E-50 T 21-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 APL_RS02830 b7ecf5275b61d9bc17312502ed6dbb30 207 Gene3D G3DSA:1.20.910.10 4 205 3.9E-74 T 21-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 Pfam PF00206 Lyase 12 344 3.1E-109 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PANTHER PTHR11444 3 475 2.8E-291 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 Gene3D G3DSA:1.10.275.10 3 141 4.4E-56 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 5 472 1.1E-263 T 21-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 Pfam PF10415 Fumarase C C-terminus 410 462 7.6E-17 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 Gene3D G3DSA:1.10.40.30 410 461 2.6E-18 T 21-04-2016 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 4.2E-7 T 21-04-2016 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 4.2E-7 T 21-04-2016 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 4.2E-7 T 21-04-2016 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 Gene3D G3DSA:1.20.200.10 142 402 1.2E-90 T 21-04-2016 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 SUPERFAMILY SSF48557 1 456 3.98E-145 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 6.1E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 6.1E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 6.1E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 6.1E-28 T 21-04-2016 IPR000362 Fumarate lyase family APL_RS05690 a4f93355b6fcae432b791cb4f5186781 475 PANTHER PTHR11444:SF25 3 475 2.8E-291 T 21-04-2016 APL_RS10175 74b9403e092dba822d33381040e05ba5 74 PANTHER PTHR39174:SF1 3 72 2.4E-19 T 21-04-2016 APL_RS10175 74b9403e092dba822d33381040e05ba5 74 Pfam PF06196 Protein of unknown function (DUF997) 5 73 1.5E-24 T 21-04-2016 IPR010398 Protein of unknown function DUF997 APL_RS10175 74b9403e092dba822d33381040e05ba5 74 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 5 72 1.0E-21 T 21-04-2016 IPR010398 Protein of unknown function DUF997 APL_RS10175 74b9403e092dba822d33381040e05ba5 74 PANTHER PTHR39174 3 72 2.4E-19 T 21-04-2016 APL_RS03740 0e76557b28e8c7ed8832477df984caec 226 Pfam PF01865 Protein of unknown function DUF47 7 225 6.8E-61 T 21-04-2016 IPR018445 Putative phosphate transport regulator APL_RS03740 0e76557b28e8c7ed8832477df984caec 226 PANTHER PTHR36536:SF3 1 226 1.4E-109 T 21-04-2016 APL_RS03740 0e76557b28e8c7ed8832477df984caec 226 SUPERFAMILY SSF109755 28 217 3.27E-15 T 21-04-2016 APL_RS03740 0e76557b28e8c7ed8832477df984caec 226 PANTHER PTHR36536 1 226 1.4E-109 T 21-04-2016 APL_RS03740 0e76557b28e8c7ed8832477df984caec 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 225 6.6E-61 T 21-04-2016 IPR002727 Protein of unknown function DUF47 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 SUPERFAMILY SSF56634 8 493 5.1E-211 T 21-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 Pfam PF06628 Catalase-related immune-responsive 420 481 7.4E-20 T 21-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 SMART SM01060 12 396 9.9E-282 T 21-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 338 346 - T 21-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PANTHER PTHR11465 11 503 1.9E-285 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 293 320 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 88 106 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 325 351 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 25 48 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 128 146 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PRINTS PR00067 Catalase signature 109 126 3.7E-69 T 21-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 PIRSF PIRSF038928 2 487 2.9E-218 T 21-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 ProSitePatterns PS00438 Catalase proximal active site signature. 48 64 - T 21-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 Gene3D G3DSA:2.40.180.10 9 362 7.9E-175 T 21-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS05175 f49f34eba2299eb34b3536e745314a88 508 Pfam PF00199 Catalase 12 393 1.1E-186 T 21-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 PIRSF PIRSF001434 1 396 1.8E-116 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 PANTHER PTHR11808:SF45 6 396 2.5E-254 T 21-04-2016 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 Gene3D G3DSA:3.90.1150.10 260 395 6.1E-40 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 PANTHER PTHR11808 6 396 2.5E-254 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 SUPERFAMILY SSF53383 24 393 4.4E-93 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 392 3.6E-119 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 9 394 5.0E-182 T 21-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 APL_RS01655 70cecedbebf353b45c18d6bed177ca4a 396 Gene3D G3DSA:3.40.640.10 7 259 1.3E-73 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS04230 68d508f9e1d8d688f04069fcb275dbe9 114 PIRSF PIRSF021239 1 114 5.8E-41 T 21-04-2016 IPR007437 Putative member of DMT superfamily APL_RS04230 68d508f9e1d8d688f04069fcb275dbe9 114 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 112 9.0E-42 T 21-04-2016 IPR007437 Putative member of DMT superfamily APL_RS04230 68d508f9e1d8d688f04069fcb275dbe9 114 PANTHER PTHR38482 1 112 3.9E-37 T 21-04-2016 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 67 2.0E-16 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.5E-33 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.79 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 PANTHER PTHR33398 2 87 3.0E-37 T 21-04-2016 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 Gene3D G3DSA:1.20.58.110 3 87 5.3E-31 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-27 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08275 76d6fbd169f6105eb08b04a54fa84936 87 SUPERFAMILY SSF46992 3 86 7.72E-31 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 PANTHER PTHR10088:SF5 6 302 1.1E-178 T 21-04-2016 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.252 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 6.2E-141 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 Gene3D G3DSA:3.40.50.10490 10 256 6.3E-94 T 21-04-2016 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 21-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 SUPERFAMILY SSF53697 12 256 1.02E-76 T 21-04-2016 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 PANTHER PTHR10088 6 302 1.1E-178 T 21-04-2016 APL_RS08115 137947e8d47599be8271a1c6002f058a 304 Pfam PF01380 SIS domain 135 217 2.1E-11 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS07425 0537669aa0b3acc4136d74a415022c8d 134 PIRSF PIRSF007352 1 134 4.2E-31 T 21-04-2016 IPR012097 Opacity-associated protein B APL_RS07425 0537669aa0b3acc4136d74a415022c8d 134 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 48 125 1.8E-5 T 21-04-2016 IPR018660 C-type lysozyme, inhibitor APL_RS10855 97cca3245a95ce95287d36173094cb44 711 SUPERFAMILY SSF101967 556 682 2.48E-10 T 21-04-2016 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 654 677 7.5E-9 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 SUPERFAMILY SSF101967 400 553 9.68E-19 T 21-04-2016 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.2E-11 T 21-04-2016 IPR024973 ESPR domain APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Gene3D G3DSA:2.150.10.10 324 398 7.7E-13 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Gene3D G3DSA:2.150.10.10 553 682 8.1E-15 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Gene3D G3DSA:2.150.10.10 274 304 1.5E-13 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Gene3D G3DSA:2.150.10.10 404 536 6.4E-25 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Gene3D G3DSA:2.150.10.10 128 224 1.5E-13 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Pfam PF05658 Head domain of trimeric autotransporter adhesin 174 196 1.3E-4 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Pfam PF05658 Head domain of trimeric autotransporter adhesin 366 390 2.0E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 Pfam PF05658 Head domain of trimeric autotransporter adhesin 407 432 1.0E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 SUPERFAMILY SSF101967 131 222 3.01E-7 T 21-04-2016 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 SUPERFAMILY SSF101967 273 317 3.01E-7 T 21-04-2016 APL_RS10855 97cca3245a95ce95287d36173094cb44 711 SUPERFAMILY SSF101967 327 433 2.62E-15 T 21-04-2016 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 3.73E-10 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 185 197 3.73E-10 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 3.73E-10 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 3.73E-10 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PANTHER PTHR30481:SF2 5 271 8.0E-79 T 21-04-2016 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PIRSF PIRSF000398 1 271 6.7E-56 T 21-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APL_RS02580 51191415213710b714718d2a2f48adaf 271 PANTHER PTHR30481 5 271 8.0E-79 T 21-04-2016 APL_RS02580 51191415213710b714718d2a2f48adaf 271 SUPERFAMILY SSF53335 1 266 4.43E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02580 51191415213710b714718d2a2f48adaf 271 Gene3D G3DSA:3.40.50.150 166 265 9.2E-33 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02580 51191415213710b714718d2a2f48adaf 271 Gene3D G3DSA:3.40.50.150 2 66 9.2E-33 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02580 51191415213710b714718d2a2f48adaf 271 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 245 3.9E-20 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 306 332 2.4E-60 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.4E-60 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.4E-60 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.4E-60 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.4E-60 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 341 1.8E-163 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 Pfam PF06723 MreB/Mbl protein 11 340 1.7E-143 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 SUPERFAMILY SSF53067 9 152 4.91E-36 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 SUPERFAMILY SSF53067 154 342 3.18E-48 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PANTHER PTHR19375:SF117 9 338 2.7E-175 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 Gene3D G3DSA:3.30.420.40 10 163 1.0E-44 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 PANTHER PTHR19375 9 338 2.7E-175 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 Gene3D G3DSA:3.90.640.10 191 265 1.9E-25 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 Gene3D G3DSA:3.30.420.40 164 190 1.5E-33 T 21-04-2016 APL_RS02240 6865f52ab86bb0f501fbdf7db47e019e 350 Gene3D G3DSA:3.30.420.40 269 323 1.5E-33 T 21-04-2016 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PANTHER PTHR32195:SF18 1 395 2.4E-143 T 21-04-2016 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 Pfam PF03222 Tryptophan/tyrosine permease family 3 369 1.9E-121 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 227 246 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 84 104 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 189 211 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 151 171 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 288 307 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 39 58 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 12 35 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 322 340 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PRINTS PR00166 Aromatic amino acid permease signature 343 362 1.1E-78 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 PANTHER PTHR32195 1 395 2.4E-143 T 21-04-2016 APL_RS07455 0fd1d5615ef94c6dcf95b4de94f83aaa 400 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 369 8.0E-127 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 PANTHER PTHR13932:SF7 6 384 1.8E-204 T 21-04-2016 APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 Pfam PF06969 HemN C-terminal domain 312 372 3.2E-8 T 21-04-2016 IPR010723 HemN, C-terminal APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 SMART SM00729 7 231 3.4E-42 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 SUPERFAMILY SSF102114 6 384 3.14E-99 T 21-04-2016 APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 Gene3D G3DSA:3.80.30.20 8 247 5.4E-24 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 PANTHER PTHR13932 6 384 1.8E-204 T 21-04-2016 APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 376 1.2E-146 T 21-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APL_RS04435 6690eddfa92a6772945ecd70315aa07d 385 Pfam PF04055 Radical SAM superfamily 12 182 3.0E-14 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SMART SM00357 53 119 4.3E-22 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 PANTHER PTHR15184:SF34 161 417 6.2E-195 T 21-04-2016 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 PANTHER PTHR15184:SF34 55 142 6.2E-195 T 21-04-2016 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SMART SM00382 171 356 8.3E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 364 3.1E-22 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SMART SM00959 5 48 3.1E-14 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 3.4E-216 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 48 3.1E-16 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SUPERFAMILY SSF68912 1 47 1.14E-8 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Gene3D G3DSA:2.40.50.140 50 118 5.8E-36 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 6.0E-32 T 21-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 PANTHER PTHR15184 161 417 6.2E-195 T 21-04-2016 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 PANTHER PTHR15184 55 142 6.2E-195 T 21-04-2016 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SUPERFAMILY SSF52540 91 372 2.1E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 420 240.683 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APL_RS01265 493ed7787bb834f975381376cb1d7823 420 SUPERFAMILY SSF50249 49 126 5.57E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Gene3D G3DSA:3.40.50.300 133 418 2.5E-103 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01265 493ed7787bb834f975381376cb1d7823 420 Gene3D G3DSA:1.10.720.10 1 48 2.0E-19 T 21-04-2016 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Gene3D G3DSA:3.40.50.150 440 710 4.6E-74 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 PANTHER PTHR18895:SF62 409 686 6.2E-117 T 21-04-2016 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 710 31.231 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Gene3D G3DSA:3.40.50.150 255 347 5.6E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Gene3D G3DSA:3.40.50.150 154 217 5.6E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 SUPERFAMILY SSF53335 403 711 3.83E-71 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 PIRSF PIRSF037618 2 711 5.1E-298 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 SMART SM00981 59 157 3.3E-19 T 21-04-2016 IPR004114 THUMP domain GO:0003723 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Pfam PF01170 Putative RNA methylase family UPF0020 165 374 4.2E-68 T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 SUPERFAMILY SSF53335 147 220 5.29E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 SUPERFAMILY SSF53335 258 371 5.29E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Pfam PF02926 THUMP domain 30 156 6.6E-16 T 21-04-2016 IPR004114 THUMP domain GO:0003723 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 438 673 4.2E-22 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APL_RS00300 06ea77117faee9ec1291aaee5dfbf10e 712 PANTHER PTHR18895 409 686 6.2E-117 T 21-04-2016 APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 PANTHER PTHR21485 1 252 4.1E-119 T 21-04-2016 APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 PANTHER PTHR21485:SF4 1 252 4.1E-119 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 SUPERFAMILY SSF53448 1 250 6.98E-64 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 Gene3D G3DSA:3.90.550.10 1 251 2.1E-81 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 Pfam PF02348 Cytidylyltransferase 5 223 1.9E-68 T 21-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 243 1.3E-112 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS08380 738596c73a54bb2a8528caf75ba24d8d 252 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 46.06 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 21-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 5.4E-80 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 Gene3D G3DSA:3.40.1180.10 1 221 3.7E-88 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 SUPERFAMILY SSF64005 1 216 1.96E-79 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 4.7E-89 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 33.726 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS02125 8214cd8cb32e3d0e6fcd3d4d5451a029 222 PANTHER PTHR10291 1 221 1.6E-115 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 PIRSF PIRSF006102 2 207 2.6E-69 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 PANTHER PTHR30586:SF1 1 207 1.1E-139 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 206 5.0E-105 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 194 1.0E-61 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 PANTHER PTHR30586 1 207 1.1E-139 T 21-04-2016 APL_RS00790 01d182c4794f352f278fc3db7e4128a0 207 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 206 36.365 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 SUPERFAMILY SSF55120 80 244 4.5E-44 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 PANTHER PTHR21600:SF2 1 292 4.6E-103 T 21-04-2016 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 84 243 8.0E-63 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 Pfam PF01479 S4 domain 15 55 6.1E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 SUPERFAMILY SSF55174 15 109 3.83E-14 T 21-04-2016 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 SMART SM00363 14 78 6.1E-6 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 PANTHER PTHR21600 1 292 4.6E-103 T 21-04-2016 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 118 132 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 Gene3D G3DSA:3.10.290.10 14 69 3.5E-14 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS06065 087a6ca8790bfcabf5fa68c1ebb65189 293 Pfam PF00849 RNA pseudouridylate synthase 80 210 2.6E-17 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 PANTHER PTHR30290 40 518 6.2E-87 T 21-04-2016 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 Gene3D G3DSA:3.90.76.10 62 193 2.6E-26 T 21-04-2016 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 432 2.3E-63 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 Gene3D G3DSA:3.10.105.10 292 495 2.2E-34 T 21-04-2016 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 SUPERFAMILY SSF53850 41 516 2.53E-97 T 21-04-2016 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 PIRSF PIRSF002741 1 523 9.7E-68 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS00145 9e21447e572ca17fb95b8abf6455ac2d 524 Gene3D G3DSA:3.40.190.10 194 291 1.3E-24 T 21-04-2016 APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 Gene3D G3DSA:1.10.600.10 5 296 6.5E-86 T 21-04-2016 IPR008949 Isoprenoid synthase domain APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 PANTHER PTHR12001:SF23 5 277 2.3E-97 T 21-04-2016 APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 SUPERFAMILY SSF48576 13 278 1.27E-81 T 21-04-2016 IPR008949 Isoprenoid synthase domain APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 Pfam PF00348 Polyprenyl synthetase 34 269 3.7E-53 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APL_RS04225 edbc0e2b6b1ffe604a9bda1a8a8e2678 297 PANTHER PTHR12001 5 277 2.3E-97 T 21-04-2016 IPR017446 Polyprenyl synthetase-related APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 5.2E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 879 9.7E-293 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 21-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 Gene3D G3DSA:1.20.1440.90 273 387 2.3E-31 T 21-04-2016 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 21-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PANTHER PTHR30523:SF3 1 879 0.0 T 21-04-2016 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 879 17.974 T 21-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 SUPERFAMILY SSF51621 7 879 0.0 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APL_RS01750 90d2abf1455c009ecfe60a885dc136ae 879 PANTHER PTHR30523 1 879 0.0 T 21-04-2016 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 SUPERFAMILY SSF109635 7 107 6.67E-35 T 21-04-2016 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 PRINTS PR00618 DksA/TraR zinc finger signature 112 123 9.7E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 PRINTS PR00618 DksA/TraR zinc finger signature 124 136 9.7E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 SUPERFAMILY SSF57716 109 146 4.7E-10 T 21-04-2016 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 PANTHER PTHR33823:SF2 6 148 4.4E-62 T 21-04-2016 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.098 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 9.9E-50 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 21-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 PANTHER PTHR33823 6 148 4.4E-62 T 21-04-2016 APL_RS00900 ae92dd2e79bbf4ba63829459040df49a 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 5.3E-10 T 21-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APL_RS10235 688bfa0c83da541a5fd0256cfcbb7e80 194 Pfam PF09335 SNARE associated Golgi protein 57 154 4.4E-13 T 21-04-2016 IPR032816 SNARE associated Golgi protein APL_RS10235 688bfa0c83da541a5fd0256cfcbb7e80 194 PANTHER PTHR30353:SF4 7 194 4.2E-43 T 21-04-2016 APL_RS10235 688bfa0c83da541a5fd0256cfcbb7e80 194 PANTHER PTHR30353 7 194 4.2E-43 T 21-04-2016 IPR032818 DedA family APL_RS09720 bf618474960c937f526760e67e690a93 95 Gene3D G3DSA:3.40.1620.10 5 47 2.2E-4 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS09720 bf618474960c937f526760e67e690a93 95 SUPERFAMILY SSF143120 4 49 2.22E-7 T 21-04-2016 APL_RS09720 bf618474960c937f526760e67e690a93 95 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 60 5.1E-6 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 Gene3D G3DSA:3.30.230.10 3 106 7.0E-30 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.234 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 104 3.0E-31 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 21-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 SUPERFAMILY SSF54211 2 107 1.21E-27 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 90 6.0E-36 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 Pfam PF00825 Ribonuclease P 1 100 2.4E-28 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APL_RS10285 dbe8156c0e04e387907ae3beb32e579b 109 PANTHER PTHR33992 1 108 3.6E-32 T 21-04-2016 APL_RS08710 bb568a45695e987069cc865dc0298574 124 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 6 124 2.9E-42 T 21-04-2016 IPR017462 Sulphur relay, TusC/DsrF APL_RS08710 bb568a45695e987069cc865dc0298574 124 Gene3D G3DSA:3.40.1260.10 5 124 1.1E-41 T 21-04-2016 IPR027396 DsrEFH-like APL_RS08710 bb568a45695e987069cc865dc0298574 124 PANTHER PTHR38780 4 124 4.0E-38 T 21-04-2016 APL_RS08710 bb568a45695e987069cc865dc0298574 124 Pfam PF02635 DsrE/DsrF-like family 6 124 2.5E-21 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APL_RS08710 bb568a45695e987069cc865dc0298574 124 SUPERFAMILY SSF75169 6 124 1.13E-30 T 21-04-2016 IPR027396 DsrEFH-like APL_RS08710 bb568a45695e987069cc865dc0298574 124 PANTHER PTHR38780:SF1 4 124 4.0E-38 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Pfam PF13180 PDZ domain 286 366 8.2E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Pfam PF13365 Trypsin-like peptidase domain 99 236 7.5E-30 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 109 121 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 315 327 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 130 150 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PRINTS PR00834 HtrA/DegQ protease family signature 171 195 1.4E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Gene3D G3DSA:2.30.42.10 277 374 9.9E-31 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Gene3D G3DSA:2.40.10.10 163 276 3.9E-45 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Gene3D G3DSA:2.30.42.10 397 461 3.5E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 462 5.9E-157 T 21-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PANTHER PTHR22939:SF101 9 62 9.6E-179 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PANTHER PTHR22939:SF101 81 395 9.6E-179 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 SUPERFAMILY SSF50156 233 358 5.13E-25 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PANTHER PTHR22939 9 62 9.6E-179 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 PANTHER PTHR22939 81 395 9.6E-179 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Gene3D G3DSA:2.40.10.10 39 161 1.4E-32 T 21-04-2016 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 453 5.3E-10 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 SUPERFAMILY SSF50156 392 460 1.14E-14 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 SUPERFAMILY SSF50494 39 267 7.31E-64 T 21-04-2016 IPR009003 Peptidase S1, PA clan APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 SMART SM00228 384 456 5.0E-11 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS06785 bc8b1495ca5df44d1d01a807bedc5523 464 SMART SM00228 275 357 4.2E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 PANTHER PTHR23114 1 153 9.4E-58 T 21-04-2016 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 SUPERFAMILY SSF55811 3 158 5.15E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 Gene3D G3DSA:3.90.79.10 3 152 8.4E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 Pfam PF00293 NUDIX domain 7 146 1.8E-26 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.3E-6 T 21-04-2016 IPR020476 NUDIX hydrolase APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.3E-6 T 21-04-2016 IPR020476 NUDIX hydrolase APL_RS10080 928fd2d949370a02066092c9fb1a4d01 206 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 157 36.046 T 21-04-2016 IPR022927 RNA pyrophosphohydrolase RppH APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PIRSF PIRSF006160 1 163 7.7E-65 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 122 141 7.3E-49 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 7.3E-49 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 7.3E-49 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 7.3E-49 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 7.3E-49 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 PANTHER PTHR35799 2 169 2.9E-90 T 21-04-2016 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 Gene3D G3DSA:3.30.1360.80 1 167 1.8E-70 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 4.0E-59 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 160 36.015 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 155 4.0E-67 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APL_RS06355 5afb2afeadbf0545292c23bed37c1c18 169 SUPERFAMILY SSF63411 4 163 1.65E-64 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 SUPERFAMILY SSF143422 2 120 8.24E-32 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 Gene3D G3DSA:3.30.70.1290 3 122 3.3E-28 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 Pfam PF01797 Transposase IS200 like 4 118 2.6E-30 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 PANTHER PTHR33360 5 132 3.3E-18 T 21-04-2016 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 SMART SM01321 3 118 8.6E-26 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APL_RS10710 8196ac19136d72c608dfed9d1851d254 146 PANTHER PTHR33360:SF4 5 132 3.3E-18 T 21-04-2016 APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 Pfam PF04352 ProQ/FINO family 17 123 1.6E-35 T 21-04-2016 IPR016103 ProQ/FinO domain APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 PANTHER PTHR38106:SF1 8 168 4.4E-42 T 21-04-2016 APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 PANTHER PTHR38106 8 168 4.4E-42 T 21-04-2016 APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 182 23.389 T 21-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 SUPERFAMILY SSF48657 9 125 1.83E-35 T 21-04-2016 IPR016103 ProQ/FinO domain APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 Gene3D G3DSA:1.10.1710.10 3 125 2.4E-31 T 21-04-2016 IPR016103 ProQ/FinO domain APL_RS00620 69bb3720600040ac10efeb43f12d3758 182 SMART SM00945 12 127 2.3E-55 T 21-04-2016 IPR016103 ProQ/FinO domain APL_RS03650 207a7393a66748ccfce23b434201884e 364 SUPERFAMILY SSF53383 17 363 1.5E-83 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03650 207a7393a66748ccfce23b434201884e 364 PANTHER PTHR11751:SF347 10 362 2.7E-109 T 21-04-2016 APL_RS03650 207a7393a66748ccfce23b434201884e 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 361 7.8E-120 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APL_RS03650 207a7393a66748ccfce23b434201884e 364 Gene3D G3DSA:3.40.640.10 48 265 1.0E-68 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03650 207a7393a66748ccfce23b434201884e 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 363 62.056 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APL_RS03650 207a7393a66748ccfce23b434201884e 364 Gene3D G3DSA:3.90.1150.10 266 363 5.8E-17 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS03650 207a7393a66748ccfce23b434201884e 364 PANTHER PTHR11751 10 362 2.7E-109 T 21-04-2016 APL_RS03650 207a7393a66748ccfce23b434201884e 364 Pfam PF00155 Aminotransferase class I and II 34 354 1.1E-55 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS03650 207a7393a66748ccfce23b434201884e 364 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 86 165 3.5E-34 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 Gene3D G3DSA:1.10.10.10 84 173 1.8E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 SUPERFAMILY SSF53155 5 90 2.55E-12 T 21-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 PANTHER PTHR10815:SF5 4 173 5.5E-57 T 21-04-2016 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 75 1.1E-6 T 21-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 PANTHER PTHR10815 4 173 5.5E-57 T 21-04-2016 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 SUPERFAMILY SSF46767 85 168 1.96E-32 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 167 1.1E-33 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 168 36.426 T 21-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 APL_RS04880 1f205ac8300bdfec6dd06a0f08969aec 187 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 21-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 PANTHER PTHR10695 1 198 4.3E-72 T 21-04-2016 APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 SUPERFAMILY SSF52540 1 192 1.5E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 Pfam PF01121 Dephospho-CoA kinase 3 176 1.1E-69 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 28.558 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 Gene3D G3DSA:3.40.50.300 2 196 1.8E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04575 41313437c07f8fc5dc6a61353090d9fa 212 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 2.6E-66 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APL_RS02355 81c502692563fa20b6bad094a3180d87 231 Gene3D G3DSA:3.40.30.10 101 230 4.1E-36 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS02355 81c502692563fa20b6bad094a3180d87 231 PANTHER PTHR35272:SF3 1 231 1.5E-70 T 21-04-2016 APL_RS02355 81c502692563fa20b6bad094a3180d87 231 PANTHER PTHR35272 1 231 1.5E-70 T 21-04-2016 APL_RS02355 81c502692563fa20b6bad094a3180d87 231 Gene3D G3DSA:3.10.450.70 24 84 6.1E-15 T 21-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal APL_RS02355 81c502692563fa20b6bad094a3180d87 231 SUPERFAMILY SSF52833 87 230 6.77E-36 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS02355 81c502692563fa20b6bad094a3180d87 231 Pfam PF13098 Thioredoxin-like domain 106 229 8.1E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS02355 81c502692563fa20b6bad094a3180d87 231 SUPERFAMILY SSF54423 24 82 2.09E-12 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APL_RS02355 81c502692563fa20b6bad094a3180d87 231 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 79 3.2E-9 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 PANTHER PTHR10584 1 289 2.0E-131 T 21-04-2016 APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 SUPERFAMILY SSF53613 3 291 2.18E-71 T 21-04-2016 IPR029056 Ribokinase-like APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 Gene3D G3DSA:3.40.1190.20 12 289 1.9E-76 T 21-04-2016 IPR029056 Ribokinase-like APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 PANTHER PTHR10584:SF57 1 289 2.0E-131 T 21-04-2016 APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 Pfam PF00294 pfkB family carbohydrate kinase 10 290 4.5E-68 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB APL_RS05330 5ade19b866b2714715ed453c0ac527bb 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APL_RS05350 701303594414f8db404b9e04eb6a5e94 193 SUPERFAMILY SSF103481 91 176 3.4E-14 T 21-04-2016 APL_RS05350 701303594414f8db404b9e04eb6a5e94 193 PANTHER PTHR22911 1 174 6.2E-17 T 21-04-2016 APL_RS05350 701303594414f8db404b9e04eb6a5e94 193 Pfam PF00892 EamA-like transporter family 41 173 6.0E-17 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS00805 a4b8b961966f90545b335df3f1b904f7 343 PANTHER PTHR30040 5 343 1.6E-143 T 21-04-2016 APL_RS00805 a4b8b961966f90545b335df3f1b904f7 343 PANTHER PTHR30040:SF3 5 343 1.6E-143 T 21-04-2016 APL_RS00805 a4b8b961966f90545b335df3f1b904f7 343 SUPERFAMILY SSF143631 25 339 9.94E-94 T 21-04-2016 IPR003374 ApbE-like domain APL_RS00805 a4b8b961966f90545b335df3f1b904f7 343 PIRSF PIRSF006268 1 342 2.6E-86 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APL_RS00805 a4b8b961966f90545b335df3f1b904f7 343 Pfam PF02424 ApbE family 33 318 3.3E-82 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 SUPERFAMILY SSF51735 23 159 3.64E-22 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 Gene3D G3DSA:3.30.360.10 144 313 4.9E-23 T 21-04-2016 APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 PIRSF PIRSF000148 8 333 1.6E-51 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 SUPERFAMILY SSF55347 134 315 1.6E-28 T 21-04-2016 APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 313 5.1E-7 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APL_RS06385 54615b404ffb188c2ef981970bac2d11 333 Gene3D G3DSA:3.40.50.720 21 143 2.9E-13 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 Pfam PF01416 tRNA pseudouridine synthase 8 103 1.0E-8 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 Pfam PF01416 tRNA pseudouridine synthase 145 244 4.2E-29 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 3.4E-75 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.038 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 SUPERFAMILY SSF55120 1 254 2.88E-91 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 Gene3D G3DSA:3.30.70.580 2 104 2.7E-36 T 21-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 PANTHER PTHR11142 1 259 4.0E-94 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 Gene3D G3DSA:3.30.70.660 106 242 1.5E-44 T 21-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS04715 d0a1370e9cd0823ab6b5b4fcb7db2723 262 PIRSF PIRSF001430 1 257 3.4E-75 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 SUPERFAMILY SSF56024 21 199 2.64E-25 T 21-04-2016 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 PANTHER PTHR12586 1 453 9.2E-216 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 SUPERFAMILY SSF56024 258 398 4.4E-15 T 21-04-2016 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 PANTHER PTHR12586:SF3 1 453 9.2E-216 T 21-04-2016 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 Gene3D G3DSA:3.30.870.10 25 191 1.9E-16 T 21-04-2016 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 Gene3D G3DSA:3.30.870.10 255 398 1.4E-9 T 21-04-2016 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 Pfam PF13091 PLD-like domain 40 184 3.6E-7 T 21-04-2016 IPR025202 Phospholipase D-like domain APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 Pfam PF13091 PLD-like domain 265 407 1.1E-17 T 21-04-2016 IPR025202 Phospholipase D-like domain APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 PIRSF PIRSF000850 1 454 3.4E-204 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 SMART SM00155 136 162 0.075 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APL_RS00215 35ec7ea5d8d025f4575da468c474701c 454 SMART SM00155 355 382 0.0023 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APL_RS04620 5a030b7468e497456243b621416ccadd 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 6.3E-42 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APL_RS04620 5a030b7468e497456243b621416ccadd 258 PANTHER PTHR30269:SF0 3 255 2.4E-100 T 21-04-2016 APL_RS04620 5a030b7468e497456243b621416ccadd 258 PANTHER PTHR30269 3 255 2.4E-100 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APL_RS01955 945211baa0378d3d59978343625a64b8 428 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 424 7.8E-183 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APL_RS01955 945211baa0378d3d59978343625a64b8 428 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 428 53.011 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APL_RS01955 945211baa0378d3d59978343625a64b8 428 SUPERFAMILY SSF51905 101 209 6.49E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01955 945211baa0378d3d59978343625a64b8 428 SUPERFAMILY SSF51905 257 418 6.49E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01955 945211baa0378d3d59978343625a64b8 428 SUPERFAMILY SSF51905 1 35 6.49E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01955 945211baa0378d3d59978343625a64b8 428 Gene3D G3DSA:3.50.50.60 262 424 1.0E-21 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01955 945211baa0378d3d59978343625a64b8 428 Gene3D G3DSA:3.50.50.60 1 53 1.0E-21 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS01955 945211baa0378d3d59978343625a64b8 428 PIRSF PIRSF000141 1 428 2.0E-186 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APL_RS01955 945211baa0378d3d59978343625a64b8 428 Pfam PF00890 FAD binding domain 4 412 4.5E-70 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 PANTHER PTHR30231 11 215 6.2E-106 T 21-04-2016 APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 SUPERFAMILY SSF53098 8 207 1.57E-56 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 SMART SM00479 19 204 1.1E-31 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 PANTHER PTHR30231:SF2 11 215 6.2E-106 T 21-04-2016 APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 Pfam PF00929 Exonuclease 21 195 1.8E-42 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 Hamap MF_00157 Ribonuclease T [rnt]. 1 218 108.093 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 TIGRFAM TIGR01298 RNaseT: ribonuclease T 11 209 1.8E-112 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APL_RS00935 60689b15d7d9220d7f9a31f0fd213b30 218 Gene3D G3DSA:3.30.420.10 11 207 3.8E-56 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 Gene3D G3DSA:3.40.50.2300 174 331 2.2E-40 T 21-04-2016 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 Gene3D G3DSA:3.40.50.2300 63 173 1.7E-39 T 21-04-2016 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 SUPERFAMILY SSF53822 63 316 1.94E-57 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 PANTHER PTHR30146 5 330 5.7E-151 T 21-04-2016 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 PANTHER PTHR30146:SF2 5 330 5.7E-151 T 21-04-2016 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 SUPERFAMILY SSF47413 5 64 6.65E-13 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 Gene3D G3DSA:1.10.260.40 5 61 1.2E-15 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 5.0E-13 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 317 4.8E-25 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APL_RS08855 682c0f39f84da27bad017f6a6986f402 332 SMART SM00354 6 76 9.5E-24 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.3E-52 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 PIRSF PIRSF002191 1 116 3.7E-49 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 SUPERFAMILY SSF50104 2 114 1.6E-46 T 21-04-2016 IPR008991 Translation protein SH3-like domain APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.144 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 21-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 PANTHER PTHR15680 1 114 2.7E-57 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09510 d71981ac1b7ec2043f4b4a3113139ea1 116 Pfam PF01245 Ribosomal protein L19 3 113 1.3E-48 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02650 25da2d319813fdd18c19f5be7ae332d6 158 Pfam PF07278 Protein of unknown function (DUF1441) 8 150 6.5E-49 T 21-04-2016 IPR009901 Bacteriophage VT1-Sakai, H0025 APL_RS02895 b39a6bf05f105576faf673f6d74c37ea 281 PANTHER PTHR35007 84 277 1.9E-32 T 21-04-2016 APL_RS02895 b39a6bf05f105576faf673f6d74c37ea 281 PANTHER PTHR35007:SF2 84 277 1.9E-32 T 21-04-2016 APL_RS02895 b39a6bf05f105576faf673f6d74c37ea 281 Pfam PF00482 Type II secretion system (T2SS), protein F 141 269 3.7E-16 T 21-04-2016 IPR018076 Type II secretion system F domain APL_RS04080 cfe0fe2792abd74f83340a1c20e5ebbc 119 PANTHER PTHR33931:SF2 1 115 1.9E-23 T 21-04-2016 APL_RS04080 cfe0fe2792abd74f83340a1c20e5ebbc 119 PANTHER PTHR33931 1 115 1.9E-23 T 21-04-2016 APL_RS04080 cfe0fe2792abd74f83340a1c20e5ebbc 119 Pfam PF03788 LrgA family 22 111 4.2E-22 T 21-04-2016 IPR005538 LrgA/CidA family GO:0016021 APL_RS05990 62a4da00e1e9819613f46b67ec1be402 201 SUPERFAMILY SSF56752 4 184 4.71E-24 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APL_RS05990 62a4da00e1e9819613f46b67ec1be402 201 Gene3D G3DSA:3.30.470.10 1 79 5.3E-29 T 21-04-2016 APL_RS05990 62a4da00e1e9819613f46b67ec1be402 201 Gene3D G3DSA:3.20.10.10 82 185 4.1E-22 T 21-04-2016 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 SUPERFAMILY SSF161098 30 218 6.28E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 232 5.5E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 Gene3D G3DSA:1.10.3720.10 30 233 9.7E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 PANTHER PTHR30614 24 238 7.7E-92 T 21-04-2016 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 127 2.4E-21 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APL_RS08515 d16264a38c1c5d9bedee160de3e4fda7 238 PANTHER PTHR30614:SF18 24 238 7.7E-92 T 21-04-2016 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 SUPERFAMILY SSF51735 231 376 2.84E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Gene3D G3DSA:3.30.70.1450 390 452 1.9E-6 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Gene3D G3DSA:3.30.70.1450 162 226 2.0E-4 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Pfam PF02080 TrkA-C domain 156 225 3.6E-13 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Pfam PF02080 TrkA-C domain 390 451 5.9E-13 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 SUPERFAMILY SSF116726 362 441 4.58E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 SUPERFAMILY SSF51735 1 151 2.87E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Gene3D G3DSA:3.40.50.720 1 150 7.8E-46 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Gene3D G3DSA:3.40.50.720 232 377 1.0E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 SUPERFAMILY SSF116726 150 225 5.89E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-29 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-29 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-29 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-29 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-29 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Pfam PF02254 TrkA-N domain 3 109 4.3E-28 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 Pfam PF02254 TrkA-N domain 235 350 2.1E-23 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PANTHER PTHR13789:SF225 416 440 1.7E-71 T 21-04-2016 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PANTHER PTHR13789:SF225 1 170 1.7E-71 T 21-04-2016 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PANTHER PTHR13789 416 440 1.7E-71 T 21-04-2016 APL_RS08280 055472bebdfe74dd28af02c0c6c45340 458 PANTHER PTHR13789 1 170 1.7E-71 T 21-04-2016 APL_RS01400 b8b7b81630838b4a8e610e30429db071 163 Gene3D G3DSA:3.90.960.10 2 155 6.1E-34 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS01400 b8b7b81630838b4a8e610e30429db071 163 PANTHER PTHR30411:SF5 5 163 4.5E-79 T 21-04-2016 APL_RS01400 b8b7b81630838b4a8e610e30429db071 163 SUPERFAMILY SSF55826 5 156 2.49E-38 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS01400 b8b7b81630838b4a8e610e30429db071 163 Pfam PF04073 Aminoacyl-tRNA editing domain 27 149 2.9E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS01400 b8b7b81630838b4a8e610e30429db071 163 PANTHER PTHR30411 5 163 4.5E-79 T 21-04-2016 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 SMART SM00861 355 527 1.6E-65 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Pfam PF02780 Transketolase, C-terminal domain 555 660 2.1E-19 T 21-04-2016 IPR033248 Transketolase, C-terminal domain APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 334 8.2E-171 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 667 0.0 T 21-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 PANTHER PTHR11624 1 310 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 PANTHER PTHR11624 341 668 0.0 T 21-04-2016 IPR033247 Transketolase family APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 SUPERFAMILY SSF52518 5 321 2.3E-122 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Gene3D G3DSA:3.40.50.920 540 668 1.3E-49 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Pfam PF02779 Transketolase, pyrimidine binding domain 354 526 5.3E-46 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 PANTHER PTHR11624:SF1 1 310 0.0 T 21-04-2016 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 PANTHER PTHR11624:SF1 341 668 0.0 T 21-04-2016 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Gene3D G3DSA:3.40.50.970 327 535 8.2E-80 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 Gene3D G3DSA:3.40.50.970 3 322 8.2E-136 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 SUPERFAMILY SSF52518 330 527 1.59E-66 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold APL_RS05150 1c82557c186c5a054aab452bd1af7436 668 SUPERFAMILY SSF52922 535 668 8.77E-44 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 Gene3D G3DSA:3.20.20.150 3 279 1.1E-50 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 2.4E-35 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 SUPERFAMILY SSF51658 2 279 2.88E-57 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 2.7E-148 T 21-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 PANTHER PTHR12110:SF20 1 284 2.4E-112 T 21-04-2016 APL_RS09035 d18442f06ed51e3b5c20ba1d2700a840 286 PANTHER PTHR12110 1 284 2.4E-112 T 21-04-2016 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 Gene3D G3DSA:3.90.1150.10 259 377 3.9E-33 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 PANTHER PTHR11808 1 378 1.9E-162 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 PIRSF PIRSF001434 1 378 2.8E-114 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 374 8.2E-129 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 SUPERFAMILY SSF53383 11 375 2.53E-101 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 Gene3D G3DSA:3.40.640.10 7 257 6.5E-87 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03565 3dbae91e2843b4a47d629c95fcba21aa 378 PANTHER PTHR11808:SF15 1 378 1.9E-162 T 21-04-2016 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 2 349 2.6E-159 T 21-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 105 115 - T 21-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PANTHER PTHR11707 13 348 5.9E-100 T 21-04-2016 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 SUPERFAMILY SSF53774 24 348 1.26E-105 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 Pfam PF00710 Asparaginase, N-terminal 26 216 2.5E-60 T 21-04-2016 IPR027474 L-asparaginase, N-terminal APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PIRSF PIRSF001220 21 348 2.5E-92 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 Gene3D G3DSA:3.40.50.40 236 347 3.6E-41 T 21-04-2016 IPR027473 L-asparaginase, C-terminal domain APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PIRSF PIRSF500176 23 349 1.8E-82 T 21-04-2016 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 SMART SM00870 26 343 3.1E-139 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 29 37 - T 21-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PANTHER PTHR11707:SF29 13 348 5.9E-100 T 21-04-2016 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 Gene3D G3DSA:3.40.50.1170 23 232 1.0E-71 T 21-04-2016 IPR027474 L-asparaginase, N-terminal APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PRINTS PR00139 Asparaginase/glutaminase family signature 27 38 9.47E-24 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PRINTS PR00139 Asparaginase/glutaminase family signature 104 122 9.47E-24 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00700 f38cc92e6969b3d734b326121e238361 349 PRINTS PR00139 Asparaginase/glutaminase family signature 283 301 9.47E-24 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 Gene3D G3DSA:3.50.50.60 110 306 7.1E-36 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 6.0E-123 T 21-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 SUPERFAMILY SSF51905 2 312 2.11E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 21-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PANTHER PTHR22912 4 316 6.2E-157 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 8.6E-75 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PANTHER PTHR22912:SF48 4 316 6.2E-157 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.0E-39 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.0E-39 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.0E-39 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-39 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-39 T 21-04-2016 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 Gene3D G3DSA:3.50.50.60 4 109 7.4E-33 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS00445 c667e0d1648ea6d0e282e366597151c6 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 299 1.3E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 PANTHER PTHR11054 11 232 8.7E-67 T 21-04-2016 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 Gene3D G3DSA:3.40.50.1360 1 232 1.1E-69 T 21-04-2016 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 ProDom PD884061 6-PHOSPHOGLUCONOLACTONASE HYDROLASE 6PGL HI0557 1 28 4.0E-5 T 21-04-2016 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 230 6.0E-56 T 21-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 SUPERFAMILY SSF100950 1 232 2.58E-61 T 21-04-2016 APL_RS06870 17fdb560cdf638ed3918af05d59963b0 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 222 1.2E-59 T 21-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APL_RS04185 e679f3bdb15914612dafb211d17dea40 262 Pfam PF00872 Transposase, Mutator family 71 167 4.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS02350 61522ba6ad1fab1e37fdba53b8ed750d 496 Gene3D G3DSA:2.70.70.10 319 466 4.3E-45 T 21-04-2016 APL_RS02350 61522ba6ad1fab1e37fdba53b8ed750d 496 PANTHER PTHR21666 84 480 2.9E-136 T 21-04-2016 APL_RS02350 61522ba6ad1fab1e37fdba53b8ed750d 496 SUPERFAMILY SSF51261 219 465 7.19E-66 T 21-04-2016 IPR011055 Duplicated hybrid motif APL_RS02350 61522ba6ad1fab1e37fdba53b8ed750d 496 Pfam PF01551 Peptidase family M23 369 463 1.3E-30 T 21-04-2016 IPR016047 Peptidase M23 APL_RS02350 61522ba6ad1fab1e37fdba53b8ed750d 496 PANTHER PTHR21666:SF207 84 480 2.9E-136 T 21-04-2016 APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 Gene3D G3DSA:3.40.50.150 160 365 1.5E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 7 368 1.8E-176 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 SUPERFAMILY SSF53335 3 367 6.2E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 7 368 2.9E-177 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 PANTHER PTHR11061 1 368 4.1E-209 T 21-04-2016 APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 368 42.682 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APL_RS10485 eb346bd7543c0fe9487f4754965825db 368 PANTHER PTHR11061:SF25 1 368 4.1E-209 T 21-04-2016 APL_RS05395 a9211eb735e25773becf87249f1de22c 732 SMART SM00490 489 586 1.6E-9 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS05395 a9211eb735e25773becf87249f1de22c 732 SMART SM00487 193 388 3.1E-16 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS05395 a9211eb735e25773becf87249f1de22c 732 Gene3D G3DSA:3.40.50.300 451 630 4.7E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05395 a9211eb735e25773becf87249f1de22c 732 Gene3D G3DSA:3.40.50.300 196 368 6.4E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05395 a9211eb735e25773becf87249f1de22c 732 Pfam PF00271 Helicase conserved C-terminal domain 490 585 9.5E-8 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS05395 a9211eb735e25773becf87249f1de22c 732 PANTHER PTHR30580 1 732 7.4E-256 T 21-04-2016 APL_RS05395 a9211eb735e25773becf87249f1de22c 732 Pfam PF00270 DEAD/DEAH box helicase 215 363 9.9E-17 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS05395 a9211eb735e25773becf87249f1de22c 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 1 731 24.997 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APL_RS05395 a9211eb735e25773becf87249f1de22c 732 TIGRFAM TIGR00595 priA: primosomal protein N' 218 728 1.1E-191 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APL_RS05395 a9211eb735e25773becf87249f1de22c 732 SUPERFAMILY SSF52540 500 597 5.74E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05395 a9211eb735e25773becf87249f1de22c 732 SUPERFAMILY SSF52540 211 437 5.74E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05460 22128b4577e6db9acb178ed3042efd0c 280 Pfam PF00892 EamA-like transporter family 3 133 8.0E-13 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS05460 22128b4577e6db9acb178ed3042efd0c 280 PANTHER PTHR22911 1 280 5.1E-79 T 21-04-2016 APL_RS05460 22128b4577e6db9acb178ed3042efd0c 280 TIGRFAM TIGR00688 rarD: protein RarD 3 248 2.9E-58 T 21-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 APL_RS05460 22128b4577e6db9acb178ed3042efd0c 280 PANTHER PTHR22911:SF57 1 280 5.1E-79 T 21-04-2016 APL_RS05460 22128b4577e6db9acb178ed3042efd0c 280 SUPERFAMILY SSF103481 36 136 1.18E-10 T 21-04-2016 APL_RS10110 356fb31d511bcdf3205546a3b6bc83f7 274 PANTHER PTHR10907:SF58 9 210 1.0E-45 T 21-04-2016 APL_RS10110 356fb31d511bcdf3205546a3b6bc83f7 274 Gene3D G3DSA:3.40.50.1820 11 269 2.7E-48 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS10110 356fb31d511bcdf3205546a3b6bc83f7 274 PANTHER PTHR10907 9 210 1.0E-45 T 21-04-2016 APL_RS10110 356fb31d511bcdf3205546a3b6bc83f7 274 Pfam PF00756 Putative esterase 21 214 1.9E-25 T 21-04-2016 IPR000801 Putative esterase APL_RS10110 356fb31d511bcdf3205546a3b6bc83f7 274 SUPERFAMILY SSF53474 7 269 6.2E-44 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS01630 cebe3269b57851a46f8504e862fe1c06 222 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01630 cebe3269b57851a46f8504e862fe1c06 222 PANTHER PTHR11079 5 219 6.9E-65 T 21-04-2016 APL_RS01630 cebe3269b57851a46f8504e862fe1c06 222 Pfam PF00849 RNA pseudouridylate synthase 22 171 5.3E-27 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01630 cebe3269b57851a46f8504e862fe1c06 222 SUPERFAMILY SSF55120 13 219 4.64E-60 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01630 cebe3269b57851a46f8504e862fe1c06 222 PANTHER PTHR11079:SF86 5 219 6.9E-65 T 21-04-2016 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 SUPERFAMILY SSF48600 3 88 1.12E-23 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 Gene3D G3DSA:1.20.59.10 2 82 1.6E-22 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 PANTHER PTHR21363 87 371 5.8E-68 T 21-04-2016 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 Pfam PF02153 Prephenate dehydrogenase 130 340 4.4E-28 T 21-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 SMART SM00830 8 88 8.9E-30 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 SUPERFAMILY SSF48179 241 367 9.01E-38 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 Gene3D G3DSA:1.10.3660.10 248 372 5.3E-52 T 21-04-2016 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 4 86 2.7E-41 T 21-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 Gene3D G3DSA:3.40.50.720 83 247 7.6E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 Pfam PF01817 Chorismate mutase type II 8 82 2.4E-20 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 SUPERFAMILY SSF51735 90 239 2.24E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 PIRSF PIRSF001499 1 373 4.2E-169 T 21-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APL_RS00945 0a768d860446220079f7a8ba1711b3ed 373 PANTHER PTHR21363:SF0 87 371 5.8E-68 T 21-04-2016 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.9E-21 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 PANTHER PTHR34182 2 105 1.3E-30 T 21-04-2016 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 4.6E-26 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.1E-42 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.1E-42 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.1E-42 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS03870 b4c791e6d3178ca7fd716803acd33590 108 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.1E-42 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APL_RS02275 350af916904411365d09b9ad8ce382d1 229 Pfam PF02698 DUF218 domain 69 205 1.3E-15 T 21-04-2016 IPR003848 Domain of unknown function DUF218 APL_RS02275 350af916904411365d09b9ad8ce382d1 229 Gene3D G3DSA:3.40.50.620 63 190 3.3E-6 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APL_RS02275 350af916904411365d09b9ad8ce382d1 229 PANTHER PTHR30336:SF0 25 223 1.6E-70 T 21-04-2016 APL_RS02275 350af916904411365d09b9ad8ce382d1 229 PANTHER PTHR30336 25 223 1.6E-70 T 21-04-2016 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-84 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PANTHER PTHR30009 1 417 1.8E-239 T 21-04-2016 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PANTHER PTHR30009 460 632 1.8E-239 T 21-04-2016 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PANTHER PTHR30009:SF0 1 417 1.8E-239 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PANTHER PTHR30009:SF0 460 632 1.8E-239 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 Pfam PF01578 Cytochrome C assembly protein 89 295 1.0E-49 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 339 357 7.25E-22 T 21-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 507 526 7.25E-22 T 21-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 620 633 7.25E-22 T 21-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 318 333 7.25E-22 T 21-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 373 385 7.25E-22 T 21-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS05495 69306a6d1c61532364226262b9538e98 638 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 323 626 1.0E-73 T 21-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APL_RS05495 69306a6d1c61532364226262b9538e98 638 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 1 626 3.0E-291 T 21-04-2016 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE APL_RS05495 69306a6d1c61532364226262b9538e98 638 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 631 1.1E-226 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS10500 85deed6fce750f7797f48988f004887f 200 Pfam PF00872 Transposase, Mutator family 10 112 1.7E-4 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS04010 85deed6fce750f7797f48988f004887f 200 Pfam PF00872 Transposase, Mutator family 10 112 1.7E-4 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 PANTHER PTHR30572:SF3 34 389 1.9E-77 T 21-04-2016 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 PANTHER PTHR30572 34 389 1.9E-77 T 21-04-2016 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 SUPERFAMILY SSF111369 50 263 1.28E-26 T 21-04-2016 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 265 6.2E-21 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 Gene3D G3DSA:2.40.50.100 60 92 4.0E-20 T 21-04-2016 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 Gene3D G3DSA:2.40.50.100 181 213 4.0E-20 T 21-04-2016 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 4.6E-56 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APL_RS02010 92ab9a6dab1dd0cdd5d46e08749f3952 393 Gene3D G3DSA:1.20.1600.10 105 170 5.4E-6 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 9 199 4.4E-97 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 SUPERFAMILY SSF89360 8 104 2.55E-24 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 SUPERFAMILY SSF117916 102 192 1.4E-22 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 8 199 45.046 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 106 2.8E-13 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 PANTHER PTHR10072 9 104 1.9E-86 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 PANTHER PTHR10072 154 196 1.9E-86 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 126 188 4.0E-28 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 Gene3D G3DSA:2.60.300.12 9 104 5.9E-20 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 PANTHER PTHR10072:SF37 9 104 1.9E-86 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 PANTHER PTHR10072:SF37 154 196 1.9E-86 T 21-04-2016 APL_RS00770 65c221af600022447c4dc6d0fa0a51dc 199 Pfam PF01106 NifU-like domain 120 181 3.4E-19 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 PANTHER PTHR37524:SF2 1 363 1.6E-193 T 21-04-2016 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 PIRSF PIRSF028774 1 363 3.2E-180 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 SUPERFAMILY SSF53335 187 287 2.89E-12 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS03575 f09134625aa60e5162cf59ada460a829 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 358 84.212 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 PANTHER PTHR37524 1 363 1.6E-193 T 21-04-2016 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 Pfam PF01728 FtsJ-like methyltransferase 188 327 5.2E-8 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APL_RS03575 f09134625aa60e5162cf59ada460a829 363 Gene3D G3DSA:3.40.50.150 186 327 2.4E-14 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 Gene3D G3DSA:3.40.720.10 293 575 2.1E-44 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 Pfam PF00884 Sulfatase 293 563 8.7E-47 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 PANTHER PTHR10342 265 588 1.1E-85 T 21-04-2016 APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 SUPERFAMILY SSF53649 291 606 7.85E-69 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 PIRSF PIRSF005091 12 656 1.9E-117 T 21-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 APL_RS04210 69fe5268f32d886e6c6171ee4ffd7fa8 658 PANTHER PTHR10342:SF236 265 588 1.1E-85 T 21-04-2016 APL_RS03755 17d8eeeba966ff25c18b14e312bebbe9 75 Pfam PF01206 Sulfurtransferase TusA 6 74 5.0E-17 T 21-04-2016 IPR001455 TusA-like domain APL_RS03755 17d8eeeba966ff25c18b14e312bebbe9 75 Gene3D G3DSA:3.30.110.40 4 75 3.1E-17 T 21-04-2016 IPR001455 TusA-like domain APL_RS03755 17d8eeeba966ff25c18b14e312bebbe9 75 PANTHER PTHR33279 1 74 8.1E-14 T 21-04-2016 APL_RS03755 17d8eeeba966ff25c18b14e312bebbe9 75 SUPERFAMILY SSF64307 4 74 1.57E-18 T 21-04-2016 IPR001455 TusA-like domain APL_RS00915 a0dda7b8feb77c2f53cb7c5141be9091 73 Pfam PF13617 YnbE-like lipoprotein 5 58 2.8E-22 T 21-04-2016 IPR025985 YnbE-like lipoprotein APL_RS00915 a0dda7b8feb77c2f53cb7c5141be9091 73 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 58 2.0E-6 T 21-04-2016 APL_RS00515 37738b2382b0248eb57e12cf351c5d9c 72 Gene3D G3DSA:3.30.70.260 1 70 1.7E-10 T 21-04-2016 APL_RS00515 37738b2382b0248eb57e12cf351c5d9c 72 SUPERFAMILY SSF55021 3 69 8.7E-10 T 21-04-2016 APL_RS00515 37738b2382b0248eb57e12cf351c5d9c 72 Pfam PF13710 ACT domain 12 69 4.1E-23 T 21-04-2016 APL_RS06080 00968bcdbf44b3b6322f3d01b937e590 298 PANTHER PTHR30521 27 295 1.3E-99 T 21-04-2016 APL_RS06080 00968bcdbf44b3b6322f3d01b937e590 298 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 294 2.1E-80 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APL_RS06080 00968bcdbf44b3b6322f3d01b937e590 298 PANTHER PTHR30521:SF0 27 295 1.3E-99 T 21-04-2016 APL_RS06080 00968bcdbf44b3b6322f3d01b937e590 298 Pfam PF04261 Dyp-type peroxidase family 5 294 1.3E-83 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APL_RS06080 00968bcdbf44b3b6322f3d01b937e590 298 SUPERFAMILY SSF54909 1 295 3.58E-85 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel APL_RS08550 6cb54683b468dc8e646779eaff45da1c 270 PANTHER PTHR33643:SF1 15 259 7.1E-48 T 21-04-2016 APL_RS08550 6cb54683b468dc8e646779eaff45da1c 270 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 264 22.613 T 21-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APL_RS08550 6cb54683b468dc8e646779eaff45da1c 270 Pfam PF01774 UreD urease accessory protein 48 250 4.8E-40 T 21-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APL_RS08550 6cb54683b468dc8e646779eaff45da1c 270 PANTHER PTHR33643 15 259 7.1E-48 T 21-04-2016 APL_RS07745 d832892ab697bd006c81e7410f7f1f19 189 SMART SM00954 73 184 4.9E-5 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS07745 d832892ab697bd006c81e7410f7f1f19 189 SUPERFAMILY SSF81301 46 185 1.49E-14 T 21-04-2016 APL_RS07745 d832892ab697bd006c81e7410f7f1f19 189 Gene3D G3DSA:3.30.460.10 53 164 3.0E-5 T 21-04-2016 APL_RS07745 d832892ab697bd006c81e7410f7f1f19 189 Pfam PF04607 Region found in RelA / SpoT proteins 74 183 1.8E-8 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 APL_RS04135 e3ba8dcb52c1e157853bdb95249ad093 324 PANTHER PTHR32332 2 324 4.6E-63 T 21-04-2016 APL_RS04135 e3ba8dcb52c1e157853bdb95249ad093 324 SUPERFAMILY SSF51412 6 323 2.01E-49 T 21-04-2016 APL_RS04135 e3ba8dcb52c1e157853bdb95249ad093 324 PANTHER PTHR32332:SF20 2 324 4.6E-63 T 21-04-2016 APL_RS04135 e3ba8dcb52c1e157853bdb95249ad093 324 Pfam PF03060 Nitronate monooxygenase 6 322 6.4E-62 T 21-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APL_RS04135 e3ba8dcb52c1e157853bdb95249ad093 324 Gene3D G3DSA:3.20.20.70 6 316 2.5E-52 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03805 ac080a5ddf416674a500d773356dfdf1 123 PIRSF PIRSF005610 1 123 8.1E-40 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APL_RS03805 ac080a5ddf416674a500d773356dfdf1 123 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 122 6.0E-28 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APL_RS03805 ac080a5ddf416674a500d773356dfdf1 123 PANTHER PTHR39594 1 122 1.6E-17 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 Gene3D G3DSA:3.40.50.300 561 628 2.0E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 Gene3D G3DSA:3.40.50.300 130 395 1.1E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 640 49.787 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 Pfam PF13604 AAA domain 174 332 8.2E-30 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 SUPERFAMILY SSF52540 301 395 3.19E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 SUPERFAMILY SSF52540 468 638 3.19E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887:SF284 68 334 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887:SF284 569 622 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887:SF284 356 472 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 7 640 3.8E-173 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 Pfam PF13538 UvrD-like helicase C-terminal domain 569 615 2.2E-15 T 21-04-2016 IPR027785 UvrD-like helicase C-terminal domain APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887 68 334 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887 569 622 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 PANTHER PTHR10887 356 472 2.8E-75 T 21-04-2016 APL_RS01295 8843fa0a54ddfc97b7868069fb170c14 645 SUPERFAMILY SSF52540 9 377 6.47E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02810 9ee6042b55fc3403d170f1ab82b21212 119 Pfam PF00899 ThiF family 2 114 3.3E-19 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS02810 9ee6042b55fc3403d170f1ab82b21212 119 PANTHER PTHR10953 1 117 1.6E-38 T 21-04-2016 APL_RS02810 9ee6042b55fc3403d170f1ab82b21212 119 SUPERFAMILY SSF69572 2 117 3.66E-30 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APL_RS02810 9ee6042b55fc3403d170f1ab82b21212 119 Gene3D G3DSA:3.40.50.720 2 117 1.5E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS02810 9ee6042b55fc3403d170f1ab82b21212 119 PANTHER PTHR10953:SF158 1 117 1.6E-38 T 21-04-2016 APL_RS03745 a6b6eb3dacd3ab812e6e2bcb7501bc74 420 Pfam PF01384 Phosphate transporter family 26 408 4.7E-115 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APL_RS03745 a6b6eb3dacd3ab812e6e2bcb7501bc74 420 PANTHER PTHR11101:SF63 1 419 5.2E-237 T 21-04-2016 APL_RS03745 a6b6eb3dacd3ab812e6e2bcb7501bc74 420 PANTHER PTHR11101 1 419 5.2E-237 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 217 25.431 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 Pfam PF13500 AAA domain 3 215 1.0E-28 T 21-04-2016 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 184 4.9E-38 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 Gene3D G3DSA:3.40.50.300 1 221 3.8E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 PANTHER PTHR21343 1 235 1.6E-83 T 21-04-2016 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 PANTHER PTHR21343:SF13 1 235 1.6E-83 T 21-04-2016 APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 SUPERFAMILY SSF52540 1 217 2.13E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03220 17ac28e0afda27084f34a543e3c255e6 239 PIRSF PIRSF006755 1 235 3.2E-65 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 PANTHER PTHR15032:SF13 4 77 1.9E-128 T 21-04-2016 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 PANTHER PTHR15032:SF13 94 363 1.9E-128 T 21-04-2016 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 PANTHER PTHR15032 4 77 1.9E-128 T 21-04-2016 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 PANTHER PTHR15032 94 363 1.9E-128 T 21-04-2016 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 1.5E-11 T 21-04-2016 APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 Gene3D G3DSA:3.60.15.10 1 345 8.0E-120 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS09025 1bb3c145ed78a2fe2851f407b2cf9224 363 SUPERFAMILY SSF56281 35 315 5.46E-23 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS10180 0874971f619c616e1fc1d64253ec7d9a 105 Hamap MF_00744 Met repressor [metJ]. 1 105 37.372 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APL_RS10180 0874971f619c616e1fc1d64253ec7d9a 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.3E-54 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APL_RS10180 0874971f619c616e1fc1d64253ec7d9a 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 1.0E-44 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APL_RS10180 0874971f619c616e1fc1d64253ec7d9a 105 SUPERFAMILY SSF47598 3 105 3.56E-56 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APL_RS10180 0874971f619c616e1fc1d64253ec7d9a 105 Gene3D G3DSA:1.10.140.10 2 105 1.3E-62 T 21-04-2016 IPR023453 Methionine repressor MetJ domain APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.406 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.7E-210 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 SUPERFAMILY SSF109604 339 497 1.05E-17 T 21-04-2016 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PANTHER PTHR30075 1 689 0.0 T 21-04-2016 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 9.2E-36 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 9.2E-36 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 9.2E-36 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 9.2E-36 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 9.2E-36 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 Pfam PF05746 DALR anticodon binding domain 582 679 7.4E-7 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APL_RS09580 1a89bb4307a7eff2f0c449811f5fdc66 689 Gene3D G3DSA:1.10.730.10 582 678 3.9E-4 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 36 67 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 Gene3D G3DSA:1.10.1740.10 19 98 5.1E-19 T 21-04-2016 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 Pfam PF04542 Sigma-70 region 2 21 81 4.5E-12 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 10 192 1.3E-71 T 21-04-2016 IPR014289 RNA polymerase sigma-24-related APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 184 1.6E-21 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 PANTHER PTHR30173:SF24 15 186 3.3E-28 T 21-04-2016 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 SUPERFAMILY SSF88659 123 184 1.42E-10 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 SUPERFAMILY SSF88946 17 95 1.29E-17 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 Gene3D G3DSA:1.10.10.10 124 186 8.4E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 Pfam PF08281 Sigma-70, region 4 133 180 2.7E-8 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APL_RS09735 28bd3a9040cdb5d16cdce24dfd094038 193 PANTHER PTHR30173 15 186 3.3E-28 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 SUPERFAMILY SSF52317 2 192 4.2E-47 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 Gene3D G3DSA:3.40.50.880 3 189 1.2E-57 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.4E-12 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.4E-12 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.4E-12 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.4E-46 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PANTHER PTHR11922 4 190 9.2E-77 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 185 4.9E-56 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PANTHER PTHR11922:SF25 4 190 9.2E-77 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 52 61 8.8E-34 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 166 179 8.8E-34 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 4 18 8.8E-34 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 104 112 8.8E-34 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 124 136 8.8E-34 T 21-04-2016 APL_RS06090 b1643c91befd84f6f06f4ad4d7d8be52 195 PRINTS PR00097 Anthranilate synthase component II signature 79 90 8.8E-34 T 21-04-2016 APL_RS05035 a277225737b96ff6f33e36498909c577 269 PANTHER PTHR34597 8 269 1.2E-71 T 21-04-2016 APL_RS05035 a277225737b96ff6f33e36498909c577 269 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 55 194 2.2E-8 T 21-04-2016 IPR005565 Haemolysin activator HlyB APL_RS05035 a277225737b96ff6f33e36498909c577 269 Gene3D G3DSA:2.40.160.50 1 269 1.7E-82 T 21-04-2016 APL_RS05035 a277225737b96ff6f33e36498909c577 269 PANTHER PTHR34597:SF2 8 269 1.2E-71 T 21-04-2016 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 PANTHER PTHR21098 1 215 5.6E-112 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 Gene3D G3DSA:2.40.30.20 5 103 9.8E-36 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 Pfam PF00677 Lumazine binding domain 99 183 1.6E-23 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 Pfam PF00677 Lumazine binding domain 3 86 1.2E-24 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 SUPERFAMILY SSF63380 92 193 4.51E-34 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 Gene3D G3DSA:2.40.30.20 104 192 8.1E-32 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 SUPERFAMILY SSF63380 1 89 1.11E-27 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 PIRSF PIRSF000498 1 210 4.4E-81 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01970 f13b79a956c2e9afcf978e5c98f74537 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 1.3E-79 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 Gene3D G3DSA:3.90.550.10 50 294 2.8E-52 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 PANTHER PTHR10859:SF92 39 397 1.4E-107 T 21-04-2016 APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 PANTHER PTHR10859 39 397 1.4E-107 T 21-04-2016 APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 SUPERFAMILY SSF53448 38 325 4.73E-64 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 7 410 5.9E-191 T 21-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- APL_RS10210 9e752b911cda2038cd932cc438b99f87 411 Pfam PF13641 Glycosyltransferase like family 2 52 271 4.4E-37 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Pfam PF00593 TonB dependent receptor 519 789 6.5E-22 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Gene3D G3DSA:2.170.130.10 23 159 3.6E-17 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Gene3D G3DSA:2.40.170.20 685 790 1.8E-68 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Gene3D G3DSA:2.40.170.20 509 653 1.8E-68 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Gene3D G3DSA:2.40.170.20 164 268 1.8E-68 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Gene3D G3DSA:2.40.170.20 331 477 1.8E-68 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 PANTHER PTHR30069:SF13 56 162 7.2E-16 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 SUPERFAMILY SSF56935 508 652 3.66E-79 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 SUPERFAMILY SSF56935 56 270 3.66E-79 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 SUPERFAMILY SSF56935 333 476 3.66E-79 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 SUPERFAMILY SSF56935 684 790 3.66E-79 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 PANTHER PTHR30069 56 162 7.2E-16 T 21-04-2016 APL_RS04800 28b60422d3a868c7d01762966bc003ec 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 151 9.0E-9 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 428 537 1.42E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PIRSF PIRSF002111 1 533 5.0E-208 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 89 173 1.3E-13 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 254 362 1.79E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 190 275 6.58E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 519 5.3E-221 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 443 520 1.6E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 100 171 5.0E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 3 111 1.4E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 20 99 2.2E-10 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 191 277 1.5E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 278 361 1.2E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Gene3D G3DSA:2.40.50.140 362 442 6.6E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PANTHER PTHR10724:SF6 1 513 1.9E-254 T 21-04-2016 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SUPERFAMILY SSF50249 346 438 1.03E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 211 232 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 329 347 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 38 52 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 125 142 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 20 38 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 289 308 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 154 174 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 107 123 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PRINTS PR00681 Ribosomal protein S1 signature 83 102 3.8E-91 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 PANTHER PTHR10724 1 513 1.9E-254 T 21-04-2016 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 361 433 6.5E-21 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 102 170 2.9E-9 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 189 259 3.9E-29 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 448 519 7.3E-17 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 274 346 2.9E-26 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 SMART SM00316 18 86 6.0E-5 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 273 346 1.2E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 448 519 2.2E-13 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 105 170 4.7E-8 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 190 259 2.8E-22 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 360 433 1.2E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03850 51f5bcd26ca33f11b796e0aa2057d0b3 554 Pfam PF00575 S1 RNA binding domain 18 84 2.8E-5 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 PANTHER PTHR30538 12 330 9.5E-122 T 21-04-2016 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 SUPERFAMILY SSF102114 98 321 4.71E-27 T 21-04-2016 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 PIRSF PIRSF004911 2 333 2.5E-115 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APL_RS03530 415067528790d13ae56e2d92e92fac06 333 Gene3D G3DSA:3.20.20.70 101 312 3.5E-18 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 Pfam PF13394 4Fe-4S single cluster domain 110 192 1.2E-5 T 21-04-2016 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 13 331 2.8E-144 T 21-04-2016 IPR022462 Lysine-2,3-aminomutase-like APL_RS03530 415067528790d13ae56e2d92e92fac06 333 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 324 1.8E-121 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APL_RS03530 415067528790d13ae56e2d92e92fac06 333 Pfam PF04055 Radical SAM superfamily 116 227 1.7E-7 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS03530 415067528790d13ae56e2d92e92fac06 333 PANTHER PTHR30538:SF1 12 330 9.5E-122 T 21-04-2016 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 Pfam PF13847 Methyltransferase domain 119 278 1.6E-37 T 21-04-2016 IPR025714 Methyltransferase domain APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 PANTHER PTHR18895 8 288 1.2E-101 T 21-04-2016 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 283 4.5E-90 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 287 42.763 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 288 1.3E-87 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 Gene3D G3DSA:3.40.50.150 92 286 1.8E-66 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 Gene3D G3DSA:1.10.8.10 1 90 7.0E-26 T 21-04-2016 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 PANTHER PTHR18895:SF64 8 288 1.2E-101 T 21-04-2016 APL_RS10815 fa1bf2907e06e30313ecf290cfb8e75f 290 SUPERFAMILY SSF53335 5 284 2.81E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 SUPERFAMILY SSF50249 40 129 9.93E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 Gene3D G3DSA:2.40.50.140 31 129 3.7E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 PANTHER PTHR30001 4 491 5.7E-213 T 21-04-2016 APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 SMART SM00316 38 123 6.7E-11 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 427 4.1E-171 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 Pfam PF00575 S1 RNA binding domain 39 110 2.6E-6 T 21-04-2016 IPR003029 S1 domain GO:0003676 APL_RS04240 7ba66ec14696c8679a65eb196684ca59 491 Pfam PF10150 Ribonuclease E/G family 125 394 3.0E-103 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 Gene3D G3DSA:2.30.33.40 2 96 2.3E-29 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.3E-26 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-26 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-26 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-26 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 SMART SM00883 2 95 4.2E-43 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.041 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 2.0E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 PANTHER PTHR10772 1 96 2.2E-34 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 21-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APL_RS05300 f6e7de368f246612871e53aaaf60e892 96 SUPERFAMILY SSF50129 1 96 2.12E-28 T 21-04-2016 IPR011032 GroES-like APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Pfam PF14450 Cell division protein FtsA 206 381 6.2E-25 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 424 26.438 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Gene3D G3DSA:3.30.420.40 297 359 9.5E-24 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Gene3D G3DSA:3.30.420.40 209 233 9.5E-24 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 PANTHER PTHR32432:SF4 1 392 5.9E-139 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 SUPERFAMILY SSF53067 9 196 1.36E-52 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 SUPERFAMILY SSF53067 197 384 5.19E-45 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 PANTHER PTHR32432 1 392 5.9E-139 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 PIRSF PIRSF003101 1 424 1.4E-132 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 SMART SM00842 10 195 1.7E-85 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Gene3D G3DSA:3.90.640.10 234 296 2.3E-14 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Gene3D G3DSA:3.30.420.40 168 208 9.1E-4 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Gene3D G3DSA:3.30.420.40 5 137 3.6E-27 T 21-04-2016 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 Pfam PF02491 SHS2 domain inserted in FTSA 85 160 3.7E-22 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APL_RS00110 e2099e2ea3cac9f854146e010ed04c18 424 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 5.0E-136 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 Gene3D G3DSA:2.70.98.10 7 267 4.1E-72 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 PANTHER PTHR11122 6 266 1.8E-68 T 21-04-2016 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 PIRSF PIRSF016020 6 269 2.9E-40 T 21-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 SUPERFAMILY SSF74650 2 265 1.0E-77 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 Pfam PF01263 Aldose 1-epimerase 24 262 4.6E-40 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APL_RS10190 23542c2bc1545fce7e3483f6fdd7313c 269 PANTHER PTHR11122:SF14 6 266 1.8E-68 T 21-04-2016 APL_RS05895 efa2b2b95a045be89b554406b9386050 415 Pfam PF04932 O-Antigen ligase 185 336 3.8E-24 T 21-04-2016 IPR007016 O-antigen ligase-related APL_RS05895 efa2b2b95a045be89b554406b9386050 415 PANTHER PTHR37422 10 402 9.7E-47 T 21-04-2016 APL_RS05895 efa2b2b95a045be89b554406b9386050 415 PANTHER PTHR37422:SF2 10 402 9.7E-47 T 21-04-2016 APL_RS03395 44e113567427ac72d35c0255d2815988 358 SUPERFAMILY SSF56935 20 357 3.21E-51 T 21-04-2016 APL_RS03395 44e113567427ac72d35c0255d2815988 358 Pfam PF13609 Gram-negative porin 7 332 2.2E-37 T 21-04-2016 APL_RS03395 44e113567427ac72d35c0255d2815988 358 Gene3D G3DSA:2.40.160.10 21 358 6.3E-64 T 21-04-2016 IPR023614 Porin domain APL_RS02030 b64370d684b881d6537398efa5b9a853 207 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 82 3.6E-20 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APL_RS02030 b64370d684b881d6537398efa5b9a853 207 PANTHER PTHR38104 1 206 4.3E-32 T 21-04-2016 APL_RS02030 b64370d684b881d6537398efa5b9a853 207 SUPERFAMILY SSF89069 3 66 5.1E-17 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APL_RS02030 b64370d684b881d6537398efa5b9a853 207 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 126 176 4.9E-15 T 21-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal APL_RS02030 b64370d684b881d6537398efa5b9a853 207 PIRSF PIRSF016938 1 199 1.1E-58 T 21-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 PIRSF PIRSF000232 1 187 5.4E-52 T 21-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 SUPERFAMILY SSF55469 1 178 2.09E-33 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 PANTHER PTHR23026 1 167 1.4E-59 T 21-04-2016 APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 Pfam PF00881 Nitroreductase family 8 162 1.1E-22 T 21-04-2016 IPR029479 Nitroreductase APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 PANTHER PTHR23026:SF107 1 167 1.4E-59 T 21-04-2016 APL_RS06610 4561ccced3429dd349d73d9190a6992c 187 Gene3D G3DSA:3.40.109.10 1 179 5.8E-39 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 137 24.071 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 Pfam PF03652 Holliday junction resolvase 4 135 7.7E-43 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 SMART SM00732 3 103 2.5E-40 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 SUPERFAMILY SSF53098 3 135 1.52E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 9.5E-58 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 Gene3D G3DSA:3.30.420.140 3 136 1.2E-46 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APL_RS01180 6797f4d6ec952ce0875255b2e78cbb69 137 PANTHER PTHR33317 4 135 4.8E-45 T 21-04-2016 APL_RS00105 d99bfdb670b9708b9b67c00449895c9a 264 PANTHER PTHR35851:SF1 5 261 3.6E-52 T 21-04-2016 APL_RS00105 d99bfdb670b9708b9b67c00449895c9a 264 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 258 23.114 T 21-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 APL_RS00105 d99bfdb670b9708b9b67c00449895c9a 264 Pfam PF03799 Cell division protein FtsQ 136 250 6.1E-22 T 21-04-2016 IPR005548 Cell division protein FtsQ/DivIB APL_RS00105 d99bfdb670b9708b9b67c00449895c9a 264 Pfam PF08478 POTRA domain, FtsQ-type 70 132 2.1E-12 T 21-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APL_RS00105 d99bfdb670b9708b9b67c00449895c9a 264 PANTHER PTHR35851 5 261 3.6E-52 T 21-04-2016 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 PIRSF PIRSF001338 2 163 4.2E-69 T 21-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 PANTHER PTHR23046:SF2 1 164 5.6E-88 T 21-04-2016 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 32.107 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 161 9.5E-65 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 PANTHER PTHR23046 1 164 5.6E-88 T 21-04-2016 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 Gene3D G3DSA:3.40.50.7700 2 160 1.3E-75 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 Pfam PF00731 AIR carboxylase 7 154 1.0E-63 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 SMART SM01001 5 156 2.6E-102 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS03445 a8dae1cea6a676d142c0802fc3ec0e62 164 SUPERFAMILY SSF52255 6 162 1.1E-66 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Gene3D G3DSA:3.30.470.20 199 388 2.6E-71 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Gene3D G3DSA:3.40.50.20 4 120 3.9E-41 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 82 2.3E-5 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 SUPERFAMILY SSF52440 3 112 1.32E-34 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS05770 6fbf28a014808317193067391c87dbb3 393 PANTHER PTHR11609:SF7 1 383 2.0E-212 T 21-04-2016 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 51.411 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 SUPERFAMILY SSF56059 120 385 1.93E-59 T 21-04-2016 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 5.1E-182 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 PANTHER PTHR11609 1 383 2.0E-212 T 21-04-2016 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Pfam PF02222 ATP-grasp domain 123 295 4.3E-60 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APL_RS05770 6fbf28a014808317193067391c87dbb3 393 Gene3D G3DSA:3.30.1490.20 123 198 1.7E-27 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 SUPERFAMILY SSF52540 1 220 2.1E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 509 1.7E-18 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 PANTHER PTHR11059 2 557 5.3E-163 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 1.9E-182 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 SUPERFAMILY SSF52540 2 50 1.87E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 SUPERFAMILY SSF52540 303 505 1.87E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 PIRSF PIRSF003128 1 557 2.2E-155 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 Gene3D G3DSA:3.40.50.300 370 388 6.4E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 Gene3D G3DSA:3.40.50.300 421 500 6.4E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00125 58ba43c878bbdbeffafadf461f8c773d 557 Gene3D G3DSA:3.40.50.300 1 209 3.9E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.6E-29 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Pfam PF03880 DbpA RNA binding domain 481 550 2.2E-19 T 21-04-2016 IPR005580 DbpA, RNA-binding domain APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Pfam PF00270 DEAD/DEAH box helicase 31 195 1.0E-50 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 SMART SM00487 25 223 1.2E-61 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 553 44.749 T 21-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 PANTHER PTHR24031 7 458 2.7E-246 T 21-04-2016 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 PANTHER PTHR24031 519 619 2.7E-246 T 21-04-2016 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 SUPERFAMILY SSF52540 74 361 1.39E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 SMART SM00490 259 340 1.8E-32 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 PANTHER PTHR24031:SF261 7 458 2.7E-246 T 21-04-2016 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 PANTHER PTHR24031:SF261 519 619 2.7E-246 T 21-04-2016 APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Gene3D G3DSA:3.40.50.300 4 206 2.6E-78 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03020 1f091fa2489bfb1d538766af52c784b5 619 Gene3D G3DSA:3.40.50.300 207 374 4.5E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS05180 8f2e198cc49a4dbe9e24760d525d5707 59 PANTHER PTHR33795:SF1 1 57 5.4E-13 T 21-04-2016 APL_RS05180 8f2e198cc49a4dbe9e24760d525d5707 59 Gene3D G3DSA:1.10.10.60 8 51 1.5E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05180 8f2e198cc49a4dbe9e24760d525d5707 59 SUPERFAMILY SSF46689 1 52 7.88E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05180 8f2e198cc49a4dbe9e24760d525d5707 59 Pfam PF13518 Helix-turn-helix domain 8 53 1.3E-6 T 21-04-2016 APL_RS05180 8f2e198cc49a4dbe9e24760d525d5707 59 PANTHER PTHR33795 1 57 5.4E-13 T 21-04-2016 APL_RS08685 af5cff770b0b7af0db29c6d9dad4b811 235 Gene3D G3DSA:3.40.30.10 43 225 5.3E-21 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08685 af5cff770b0b7af0db29c6d9dad4b811 235 SUPERFAMILY SSF52833 41 227 1.94E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS02955 c9b68a044a6891ef34a5310997674812 494 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 492 1.4E-230 T 21-04-2016 IPR033186 Helicase HerA-like C-terminal APL_RS02955 c9b68a044a6891ef34a5310997674812 494 Gene3D G3DSA:3.40.50.300 8 109 3.8E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02955 c9b68a044a6891ef34a5310997674812 494 Gene3D G3DSA:3.40.50.300 205 382 3.8E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02955 c9b68a044a6891ef34a5310997674812 494 PANTHER PTHR30121 19 441 8.7E-157 T 21-04-2016 APL_RS02955 c9b68a044a6891ef34a5310997674812 494 SUPERFAMILY SSF52540 8 383 3.9E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02955 c9b68a044a6891ef34a5310997674812 494 PANTHER PTHR30121:SF3 19 441 8.7E-157 T 21-04-2016 APL_RS02955 c9b68a044a6891ef34a5310997674812 494 SMART SM00382 22 329 6.2E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 7.1E-30 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 Gene3D G3DSA:3.30.930.10 106 431 1.2E-139 T 21-04-2016 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PIRSF PIRSF001529 1 435 1.6E-180 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 274 286 7.0E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 343 359 7.0E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 286 299 7.0E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 326 339 7.0E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 361 377 7.0E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 SUPERFAMILY SSF46589 1 113 6.28E-28 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 Gene3D G3DSA:1.10.287.40 1 105 1.1E-24 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 41.165 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 PANTHER PTHR11778 1 434 2.4E-210 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 1.1E-176 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 232 410 1.4E-36 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04535 f89061777d93b0d9a93f7eed4a8145e9 435 SUPERFAMILY SSF55681 117 430 6.08E-99 T 21-04-2016 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.393 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 7.0E-9 T 21-04-2016 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 Pfam PF00444 Ribosomal protein L36 1 37 1.8E-19 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.7E-22 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 SUPERFAMILY SSF57840 1 37 1.57E-16 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09465 26d68faa1ad4a24844cf7ea65063be32 37 PANTHER PTHR18804 1 37 2.6E-18 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 Pfam PF00106 short chain dehydrogenase 2 185 1.9E-41 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 3.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 3.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 3.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 3.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 Gene3D G3DSA:3.40.50.720 2 270 9.5E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PANTHER PTHR24322 143 175 1.2E-47 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 PANTHER PTHR24322 6 127 1.2E-47 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS06605 b3db17b2b885db7e0cb6cb7415f8b314 273 SUPERFAMILY SSF51735 1 268 1.97E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07285 8c3c2a76810aff6cd454ebd04baf581a 434 PIRSF PIRSF015658 1 432 2.7E-174 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS07285 8c3c2a76810aff6cd454ebd04baf581a 434 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 4.8E-192 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS07285 8c3c2a76810aff6cd454ebd04baf581a 434 PANTHER PTHR35806 1 65 1.5E-202 T 21-04-2016 APL_RS07285 8c3c2a76810aff6cd454ebd04baf581a 434 PANTHER PTHR35806 95 434 1.5E-202 T 21-04-2016 APL_RS07285 8c3c2a76810aff6cd454ebd04baf581a 434 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 1.4E-157 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 SMART SM00829 12 334 8.4E-9 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 SUPERFAMILY SSF50129 4 178 7.0E-50 T 21-04-2016 IPR011032 GroES-like APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 PANTHER PTHR11695 14 338 5.3E-147 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 Gene3D G3DSA:3.90.180.10 1 167 6.7E-59 T 21-04-2016 IPR011032 GroES-like APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 SUPERFAMILY SSF51735 137 302 8.73E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 Pfam PF00107 Zinc-binding dehydrogenase 174 298 1.6E-28 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 PANTHER PTHR11695:SF498 14 338 5.3E-147 T 21-04-2016 APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 Gene3D G3DSA:3.40.50.720 168 284 4.2E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10380 9ccd830b745c4cb88e33b066604c85a0 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 2.2E-30 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 754 771 0.049 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 794 809 10.0 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 736 753 0.66 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 772 788 0.059 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF08339 RTX C-terminal domain 810 956 2.1E-51 T 21-04-2016 IPR013550 RTX, C-terminal APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR00313 NodO calcium binding signature 773 781 6.68E-9 T 21-04-2016 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR00313 NodO calcium binding signature 782 791 6.68E-9 T 21-04-2016 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR00313 NodO calcium binding signature 755 763 6.68E-9 T 21-04-2016 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR00313 NodO calcium binding signature 743 754 6.68E-9 T 21-04-2016 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 737 758 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 399 419 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 434 450 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 343 361 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 277 298 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 487 508 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 538 562 5.25E-79 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Gene3D G3DSA:2.150.10.10 710 851 6.6E-31 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Gene3D G3DSA:2.150.10.10 614 642 6.6E-31 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 SUPERFAMILY SSF51120 712 853 1.83E-33 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 SUPERFAMILY SSF51120 605 645 1.83E-33 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS04995 9fd710c663276ce2ff0e90ed52803503 956 Pfam PF02382 RTX N-terminal domain 6 654 0.0 T 21-04-2016 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 PIRSF PIRSF038994 1 380 9.1E-110 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 PANTHER PTHR11113 3 377 1.2E-149 T 21-04-2016 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 SUPERFAMILY SSF51556 55 349 4.29E-94 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 SUPERFAMILY SSF51338 3 54 1.97E-15 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 375 1.1E-155 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 PANTHER PTHR11113:SF7 3 377 1.2E-149 T 21-04-2016 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 Gene3D G3DSA:3.20.20.140 56 348 1.3E-93 T 21-04-2016 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 Gene3D G3DSA:2.30.40.10 349 363 5.4E-11 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 Gene3D G3DSA:2.30.40.10 2 55 5.4E-11 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APL_RS09340 6a4ebbff79b823847f0ddbebcbd9ee21 381 Pfam PF01979 Amidohydrolase family 52 376 1.6E-42 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 Gene3D G3DSA:3.40.190.10 42 135 4.5E-36 T 21-04-2016 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 Gene3D G3DSA:3.40.190.10 227 263 4.5E-36 T 21-04-2016 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 263 2.7E-51 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 SUPERFAMILY SSF53850 7 263 3.19E-61 T 21-04-2016 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 SMART SM00062 46 268 2.8E-69 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 PANTHER PTHR18966:SF191 36 263 5.9E-49 T 21-04-2016 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 Gene3D G3DSA:3.40.190.10 137 220 1.0E-18 T 21-04-2016 APL_RS08990 24f1f7adb71c495af4193d697cad413b 278 PANTHER PTHR18966 36 263 5.9E-49 T 21-04-2016 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 500 44.451 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PANTHER PTHR22594:SF4 2 500 3.5E-271 T 21-04-2016 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 Pfam PF01336 OB-fold nucleic acid binding domain 64 142 2.2E-14 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PANTHER PTHR22594 2 500 3.5E-271 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 Gene3D G3DSA:3.30.930.10 155 496 1.5E-117 T 21-04-2016 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 SUPERFAMILY SSF55681 158 498 9.36E-122 T 21-04-2016 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 Gene3D G3DSA:2.40.50.140 14 150 1.0E-47 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 SUPERFAMILY SSF50249 9 150 4.93E-45 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 497 3.4E-79 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PIRSF PIRSF039101 2 500 5.1E-198 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 11 499 1.8E-224 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 5.2E-38 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 5.2E-38 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 5.2E-38 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 5.2E-38 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS04235 119f21fc496c9bcc457a4ec3eaa4bf92 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 5.2E-38 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 Pfam PF00156 Phosphoribosyl transferase domain 43 152 1.2E-14 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 PANTHER PTHR11776:SF0 3 179 1.3E-76 T 21-04-2016 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 7 176 36.666 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 PANTHER PTHR11776 3 179 1.3E-76 T 21-04-2016 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 175 2.3E-68 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 SUPERFAMILY SSF53271 9 175 1.11E-51 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS01380 1ad25c935bd961190f037b8cdb2f4d63 179 Gene3D G3DSA:3.40.50.2020 3 177 1.3E-68 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 341 9.3E-157 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 PANTHER PTHR10366:SF41 3 354 5.1E-173 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 Gene3D G3DSA:3.90.25.10 193 339 2.4E-55 T 21-04-2016 APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 2.0E-96 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 Gene3D G3DSA:3.40.50.720 1 192 2.5E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 PANTHER PTHR10366 3 354 5.1E-173 T 21-04-2016 APL_RS07765 b26d9cc522f69e169bb905eb4154f69c 357 SUPERFAMILY SSF51735 1 339 2.93E-92 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03760 9b36c3664e2b5d3fc1e68d892577752b 171 Pfam PF01814 Hemerythrin HHE cation binding domain 15 142 8.2E-12 T 21-04-2016 IPR012312 Haemerythrin-like APL_RS03760 9b36c3664e2b5d3fc1e68d892577752b 171 Gene3D G3DSA:1.20.120.520 1 170 3.3E-52 T 21-04-2016 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 Pfam PF01555 DNA methylase 89 418 1.5E-36 T 21-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PANTHER PTHR13370:SF7 56 98 1.7E-17 T 21-04-2016 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PANTHER PTHR13370:SF7 133 231 1.7E-17 T 21-04-2016 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 Gene3D G3DSA:3.40.50.150 65 109 4.0E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 Gene3D G3DSA:3.40.50.150 145 255 4.0E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 Gene3D G3DSA:3.40.50.150 334 496 4.0E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 92 98 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PANTHER PTHR13370 56 98 1.7E-17 T 21-04-2016 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PANTHER PTHR13370 133 231 1.7E-17 T 21-04-2016 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 376 398 7.7E-15 T 21-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 399 413 7.7E-15 T 21-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 89 101 7.7E-15 T 21-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 155 174 7.7E-15 T 21-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 PIRSF PIRSF015855 2 615 4.5E-158 T 21-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 SUPERFAMILY SSF53335 350 417 2.13E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 SUPERFAMILY SSF53335 56 109 2.13E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04255 f1e1aa7ddd13083076f55187266a1e32 615 SUPERFAMILY SSF53335 143 238 2.13E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS05325 846e390b32da05787935e92caef20f03 213 Pfam PF01081 KDPG and KHG aldolase 8 203 3.2E-83 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APL_RS05325 846e390b32da05787935e92caef20f03 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 21-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APL_RS05325 846e390b32da05787935e92caef20f03 213 SUPERFAMILY SSF51569 2 210 1.63E-67 T 21-04-2016 APL_RS05325 846e390b32da05787935e92caef20f03 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.7E-83 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APL_RS05325 846e390b32da05787935e92caef20f03 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 21-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 APL_RS05325 846e390b32da05787935e92caef20f03 213 PANTHER PTHR30246 1 208 1.1E-128 T 21-04-2016 APL_RS05325 846e390b32da05787935e92caef20f03 213 PANTHER PTHR30246:SF5 1 208 1.1E-128 T 21-04-2016 APL_RS05325 846e390b32da05787935e92caef20f03 213 Gene3D G3DSA:3.20.20.70 2 211 2.0E-77 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS01945 d1c0a80a14c4c43e165f1bb9665c0e8d 362 PANTHER PTHR23344:SF7 30 362 9.7E-108 T 21-04-2016 APL_RS01945 d1c0a80a14c4c43e165f1bb9665c0e8d 362 PANTHER PTHR23344 30 362 9.7E-108 T 21-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APL_RS01945 d1c0a80a14c4c43e165f1bb9665c0e8d 362 SUPERFAMILY SSF51695 34 358 3.92E-88 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APL_RS01945 d1c0a80a14c4c43e165f1bb9665c0e8d 362 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 38 353 1.4E-72 T 21-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APL_RS01945 d1c0a80a14c4c43e165f1bb9665c0e8d 362 Gene3D G3DSA:3.20.20.190 34 358 1.2E-85 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 PANTHER PTHR11280 1 259 2.0E-180 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 SUPERFAMILY SSF100950 1 263 2.62E-104 T 21-04-2016 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 230 1.0E-20 T 21-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 Gene3D G3DSA:3.40.50.1360 1 263 1.2E-112 T 21-04-2016 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 21-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-141 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APL_RS09335 c1f97988daef40149c0512ed6d165671 267 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.899 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 581 4.3E-238 T 21-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 SUPERFAMILY SSF52540 333 580 8.56E-94 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 PANTHER PTHR24221 1 582 0.0 T 21-04-2016 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 Gene3D G3DSA:1.20.1560.10 12 325 2.0E-71 T 21-04-2016 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 SMART SM00382 368 555 1.1E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 Pfam PF00664 ABC transporter transmembrane region 26 297 7.0E-58 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 Gene3D G3DSA:3.40.50.300 342 574 4.1E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 Pfam PF00005 ABC transporter 359 509 6.9E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 PANTHER PTHR24221:SF188 1 582 0.0 T 21-04-2016 APL_RS04070 2c87bc3cb476a44414ba1cb10b257bda 582 SUPERFAMILY SSF90123 7 327 7.46E-73 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS04560 8c4c2ea5943fe3a9a8d03004a265d3f7 164 Gene3D G3DSA:3.30.160.150 16 162 1.5E-50 T 21-04-2016 APL_RS04560 8c4c2ea5943fe3a9a8d03004a265d3f7 164 PANTHER PTHR38098:SF1 5 154 1.0E-40 T 21-04-2016 APL_RS04560 8c4c2ea5943fe3a9a8d03004a265d3f7 164 Pfam PF04390 Lipopolysaccharide-assembly 7 151 3.1E-16 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APL_RS04560 8c4c2ea5943fe3a9a8d03004a265d3f7 164 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 1 158 25.0 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APL_RS04560 8c4c2ea5943fe3a9a8d03004a265d3f7 164 PANTHER PTHR38098 5 154 1.0E-40 T 21-04-2016 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 PANTHER PTHR19211:SF7 1 556 0.0 T 21-04-2016 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 PANTHER PTHR19211 1 556 0.0 T 21-04-2016 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Pfam PF12848 ABC transporter 231 304 1.3E-13 T 21-04-2016 IPR032781 ABC-transporter extension domain APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 SMART SM00382 32 237 8.8E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 SMART SM00382 349 519 7.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Gene3D G3DSA:3.40.50.300 323 534 4.5E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 SUPERFAMILY SSF52540 12 244 7.36E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Gene3D G3DSA:3.40.50.300 142 289 3.2E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Gene3D G3DSA:3.40.50.300 12 107 3.2E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 554 5.8E-299 T 21-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Pfam PF00005 ABC transporter 23 192 4.6E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 Pfam PF00005 ABC transporter 341 474 3.4E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06730 8775a2aa1b25d8c2236df8d73f912c7b 556 SUPERFAMILY SSF52540 305 532 1.46E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 PANTHER PTHR30537 1 297 3.8E-108 T 21-04-2016 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 SUPERFAMILY SSF46785 4 111 3.8E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 SUPERFAMILY SSF53850 88 293 2.02E-47 T 21-04-2016 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 Pfam PF03466 LysR substrate binding domain 88 291 1.2E-47 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 Gene3D G3DSA:3.40.190.10 92 177 1.7E-23 T 21-04-2016 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 PANTHER PTHR30537:SF13 1 297 3.8E-108 T 21-04-2016 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 Gene3D G3DSA:3.40.190.10 178 258 2.1E-8 T 21-04-2016 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS06205 8726b050b94ad3a626cb2459c2fb4f2b 297 Gene3D G3DSA:1.10.10.10 3 83 1.9E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 6.3E-175 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 SUPERFAMILY SSF55681 9 293 1.69E-132 T 21-04-2016 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 Gene3D G3DSA:3.30.930.10 4 214 2.1E-105 T 21-04-2016 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 8 294 62.023 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 163 178 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 114 138 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 140 160 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 62 77 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 83 103 7.8E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 PANTHER PTHR30075 1 301 1.2E-268 T 21-04-2016 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 Gene3D G3DSA:1.20.58.180 216 298 3.3E-35 T 21-04-2016 APL_RS09565 94a5fee86cd3241a7ce8d7c5674df0a0 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 10 292 4.6E-148 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 SUPERFAMILY SSF52283 25 121 9.64E-30 T 21-04-2016 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 Gene3D G3DSA:3.40.50.720 117 293 2.4E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 SUPERFAMILY SSF51735 102 291 3.85E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 PANTHER PTHR10996 5 315 1.2E-111 T 21-04-2016 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 314 2.8E-23 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 290 1.2E-53 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 PANTHER PTHR10996:SF91 5 315 1.2E-111 T 21-04-2016 APL_RS10800 0c2a9747eebdd7fd268b7902b800e3ca 316 Gene3D G3DSA:3.40.50.720 8 116 2.7E-28 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS00565 23978d567cd22596e357b34af290151b 261 PANTHER PTHR30136 3 258 1.0E-149 T 21-04-2016 APL_RS00565 23978d567cd22596e357b34af290151b 261 Pfam PF01614 Bacterial transcriptional regulator 129 254 2.9E-40 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal APL_RS00565 23978d567cd22596e357b34af290151b 261 Pfam PF09339 IclR helix-turn-helix domain 11 59 1.7E-15 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APL_RS00565 23978d567cd22596e357b34af290151b 261 SMART SM00346 9 99 3.3E-37 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APL_RS00565 23978d567cd22596e357b34af290151b 261 SUPERFAMILY SSF46785 10 83 6.69E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00565 23978d567cd22596e357b34af290151b 261 Gene3D G3DSA:1.10.10.10 4 77 5.0E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00565 23978d567cd22596e357b34af290151b 261 PANTHER PTHR30136:SF19 3 258 1.0E-149 T 21-04-2016 APL_RS00565 23978d567cd22596e357b34af290151b 261 Gene3D G3DSA:3.30.450.40 78 258 4.4E-56 T 21-04-2016 IPR029016 GAF domain-like APL_RS00565 23978d567cd22596e357b34af290151b 261 SUPERFAMILY SSF55781 76 258 1.05E-44 T 21-04-2016 IPR029016 GAF domain-like APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 Gene3D G3DSA:3.30.70.790 88 163 3.7E-21 T 21-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 Hamap MF_00822 Urease accessory protein UreE [ureE]. 9 160 19.255 T 21-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 SUPERFAMILY SSF69737 88 154 2.62E-14 T 21-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 Gene3D G3DSA:2.60.260.20 10 86 1.9E-22 T 21-04-2016 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 PANTHER PTHR33620 10 184 2.6E-112 T 21-04-2016 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 PANTHER PTHR33620:SF2 10 184 2.6E-112 T 21-04-2016 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 Pfam PF05194 UreE urease accessory protein, C-terminal domain 90 173 7.3E-16 T 21-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 SMART SM00988 14 82 3.4E-12 T 21-04-2016 IPR004029 UreE urease accessory, N-terminal APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 PIRSF PIRSF036402 9 179 2.0E-43 T 21-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 SUPERFAMILY SSF69287 10 86 4.84E-14 T 21-04-2016 IPR004029 UreE urease accessory, N-terminal APL_RS08565 fd7e0d669e0d0a26e323334bb283dcdd 187 Pfam PF02814 UreE urease accessory protein, N-terminal domain 23 81 3.5E-14 T 21-04-2016 IPR004029 UreE urease accessory, N-terminal APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 313 50.338 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 PANTHER PTHR30606 10 318 2.7E-155 T 21-04-2016 APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 PANTHER PTHR30606:SF4 10 318 2.7E-155 T 21-04-2016 APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 308 5.8E-93 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 316 1.9E-132 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APL_RS00885 e8229dd6bf7d05de598a05081a11242e 318 PIRSF PIRSF026649 11 316 1.1E-88 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1644 1759 5.89E-14 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1224 1354 1.26E-20 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1499 1629 8.63E-21 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1086 1208 8.37E-21 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 PANTHER PTHR39431 638 844 1.4E-21 T 21-04-2016 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1249 1267 - T 21-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1808 1826 - T 21-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1524 1542 - T 21-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1244 1260 0.053 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 373 388 38.0 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1665 1681 0.038 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 391 404 17.0 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1390 1406 0.038 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1519 1535 0.053 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1261 1277 0.24 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1811 1827 0.018 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1107 1123 0.0056 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1536 1552 0.24 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1371 1387 56.0 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1646 1662 56.0 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1794 1810 0.062 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1369 1484 1.31E-14 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 1769 1909 3.14E-22 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 275 283 2.62E-5 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 PRINTS PR00313 NodO calcium binding signature 1675 1684 3.7E-8 T 21-04-2016 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 PRINTS PR00313 NodO calcium binding signature 1537 1545 3.7E-8 T 21-04-2016 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 PRINTS PR00313 NodO calcium binding signature 1259 1270 3.7E-8 T 21-04-2016 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 PRINTS PR00313 NodO calcium binding signature 1666 1674 3.7E-8 T 21-04-2016 APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 375 420 2.4E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1370 1489 4.2E-18 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1773 1913 7.7E-27 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1223 1359 2.9E-24 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 276 298 2.4E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1645 1764 5.4E-17 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1498 1634 3.0E-24 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 Gene3D G3DSA:2.150.10.10 1084 1214 5.4E-25 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS05225 e16a3f3d354d186c8a4df95446675d9c 1951 SUPERFAMILY SSF51120 370 406 2.62E-5 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS06305 a310ebce97a6f506c25e2cb80660030c 139 PANTHER PTHR33653 1 138 1.2E-19 T 21-04-2016 APL_RS06305 a310ebce97a6f506c25e2cb80660030c 139 Pfam PF01850 PIN domain 2 122 8.8E-13 T 21-04-2016 IPR002716 PIN domain APL_RS06305 a310ebce97a6f506c25e2cb80660030c 139 SUPERFAMILY SSF88723 1 137 1.29E-24 T 21-04-2016 IPR029060 PIN domain-like APL_RS06305 a310ebce97a6f506c25e2cb80660030c 139 PANTHER PTHR33653:SF1 1 138 1.2E-19 T 21-04-2016 APL_RS06305 a310ebce97a6f506c25e2cb80660030c 139 Gene3D G3DSA:3.40.50.1010 1 128 5.5E-18 T 21-04-2016 IPR029060 PIN domain-like APL_RS01770 89c6b9180ef467884715ca4945303170 553 Pfam PF02378 Phosphotransferase system, EIIC 229 488 3.7E-14 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APL_RS01770 89c6b9180ef467884715ca4945303170 553 SUPERFAMILY SSF52794 100 201 1.12E-33 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS01770 89c6b9180ef467884715ca4945303170 553 SUPERFAMILY SSF52794 6 84 3.14E-5 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS01770 89c6b9180ef467884715ca4945303170 553 Gene3D G3DSA:3.40.50.2300 96 201 1.7E-40 T 21-04-2016 APL_RS01770 89c6b9180ef467884715ca4945303170 553 PANTHER PTHR30505:SF0 36 547 1.7E-240 T 21-04-2016 APL_RS01770 89c6b9180ef467884715ca4945303170 553 PANTHER PTHR30505 36 547 1.7E-240 T 21-04-2016 APL_RS01770 89c6b9180ef467884715ca4945303170 553 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 102 185 4.2E-38 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APL_RS01770 89c6b9180ef467884715ca4945303170 553 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 103 187 7.7E-17 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS01770 89c6b9180ef467884715ca4945303170 553 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 210 548 3.1E-140 T 21-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APL_RS06970 71057d3039b280ca3699aad467991132 337 SUPERFAMILY SSF55326 6 156 4.01E-34 T 21-04-2016 APL_RS06970 71057d3039b280ca3699aad467991132 337 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 154 2.7E-17 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS06970 71057d3039b280ca3699aad467991132 337 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 337 2.3E-136 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APL_RS06970 71057d3039b280ca3699aad467991132 337 PANTHER PTHR30303:SF0 1 337 2.4E-151 T 21-04-2016 APL_RS06970 71057d3039b280ca3699aad467991132 337 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 316 2.2E-23 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS06970 71057d3039b280ca3699aad467991132 337 Gene3D G3DSA:3.90.650.10 163 317 9.9E-25 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS06970 71057d3039b280ca3699aad467991132 337 PANTHER PTHR30303 1 337 2.4E-151 T 21-04-2016 APL_RS06970 71057d3039b280ca3699aad467991132 337 PIRSF PIRSF005644 1 337 3.3E-121 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APL_RS06970 71057d3039b280ca3699aad467991132 337 SUPERFAMILY SSF56042 162 332 1.5E-38 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APL_RS06970 71057d3039b280ca3699aad467991132 337 Gene3D G3DSA:3.30.1330.10 17 156 3.7E-26 T 21-04-2016 IPR016188 PurM-like, N-terminal domain APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 SUPERFAMILY SSF52313 6 230 4.58E-92 T 21-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 21-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PANTHER PTHR12534 1 238 1.4E-117 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 225 4.6E-104 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 Gene3D G3DSA:3.40.50.10490 158 232 4.0E-65 T 21-04-2016 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 Gene3D G3DSA:3.40.50.10490 23 99 4.0E-65 T 21-04-2016 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 Pfam PF00318 Ribosomal protein S2 9 224 5.3E-90 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.905 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.5E-36 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS02975 4ed49d574dee5ba584281793a8721dae 238 Gene3D G3DSA:1.10.287.610 100 152 5.8E-25 T 21-04-2016 APL_RS03205 f921582bc9d36c5fcfb4e08751f1ae65 174 Pfam PF00877 NlpC/P60 family 67 173 5.8E-32 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS03205 f921582bc9d36c5fcfb4e08751f1ae65 174 SUPERFAMILY SSF54001 54 174 2.09E-40 T 21-04-2016 APL_RS03205 f921582bc9d36c5fcfb4e08751f1ae65 174 Gene3D G3DSA:3.90.1720.10 57 174 2.7E-42 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS03205 f921582bc9d36c5fcfb4e08751f1ae65 174 PANTHER PTHR21666 55 173 1.7E-45 T 21-04-2016 APL_RS03205 f921582bc9d36c5fcfb4e08751f1ae65 174 PANTHER PTHR21666:SF210 55 173 1.7E-45 T 21-04-2016 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PIRSF PIRSF002097 1 98 4.1E-43 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 SUPERFAMILY SSF46689 12 97 5.02E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 5.7E-16 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 Gene3D G3DSA:1.10.10.60 27 97 6.6E-28 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PANTHER PTHR32071 13 97 3.0E-27 T 21-04-2016 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 2.3E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 2.3E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.3E-30 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.3E-30 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.3E-30 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APL_RS00975 fbcfa3517399c30b44c64d720f1cb774 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.3E-30 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APL_RS09950 a8c970df95e84bc44b8e9bf5b35b6f29 307 Pfam PF05036 Sporulation related domain 237 300 2.9E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 APL_RS09950 a8c970df95e84bc44b8e9bf5b35b6f29 307 Gene3D G3DSA:3.30.70.1070 233 302 6.0E-23 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 APL_RS09950 a8c970df95e84bc44b8e9bf5b35b6f29 307 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 3 305 3.2E-51 T 21-04-2016 IPR011930 Cell division protein FtsN GO:0005515 APL_RS09950 a8c970df95e84bc44b8e9bf5b35b6f29 307 SUPERFAMILY SSF110997 237 296 3.79E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 Gene3D G3DSA:1.20.1300.10 5 129 4.9E-46 T 21-04-2016 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 4 128 26.812 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 9 118 1.0E-49 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 SUPERFAMILY SSF81343 5 129 8.99E-50 T 21-04-2016 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 Pfam PF02300 Fumarate reductase subunit C 5 127 3.6E-45 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APL_RS08070 1c5aa804241d40dc23db4445f1c72959 130 PIRSF PIRSF000180 4 130 1.0E-49 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 SUPERFAMILY SSF53720 3 424 2.55E-85 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 Gene3D G3DSA:3.40.50.1980 28 237 9.3E-80 T 21-04-2016 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PIRSF PIRSF000099 1 427 4.3E-163 T 21-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 Pfam PF00815 Histidinol dehydrogenase 24 424 2.2E-165 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PANTHER PTHR21256:SF14 1 428 5.5E-278 T 21-04-2016 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 9.5E-163 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 21-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PANTHER PTHR21256 1 428 5.5E-278 T 21-04-2016 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.068 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS10700 8a129d0b2349e5f899414897ec83e873 428 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 5.4E-100 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 PANTHER PTHR33795 1 97 1.3E-28 T 21-04-2016 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 Pfam PF13518 Helix-turn-helix domain 8 53 5.4E-6 T 21-04-2016 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 PANTHER PTHR33795:SF1 1 97 1.3E-28 T 21-04-2016 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 SUPERFAMILY SSF48295 56 95 3.14E-6 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 Gene3D G3DSA:1.10.10.60 8 51 6.3E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS05515 875f6c8cbfabd6da8c3d6a4278cedc22 102 SUPERFAMILY SSF46689 1 52 1.54E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07800 336934def1edde0d23708070c4fe39a0 171 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APL_RS07800 336934def1edde0d23708070c4fe39a0 171 SUPERFAMILY SSF52833 16 159 7.35E-26 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS07800 336934def1edde0d23708070c4fe39a0 171 Pfam PF00578 AhpC/TSA family 48 151 9.3E-12 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APL_RS07800 336934def1edde0d23708070c4fe39a0 171 PANTHER PTHR10681 63 157 5.3E-24 T 21-04-2016 APL_RS07800 336934def1edde0d23708070c4fe39a0 171 PANTHER PTHR10681:SF106 63 157 5.3E-24 T 21-04-2016 APL_RS07800 336934def1edde0d23708070c4fe39a0 171 Gene3D G3DSA:3.40.30.10 25 158 8.5E-25 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.0E-10 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.0E-10 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 SUPERFAMILY SSF46689 9 85 6.8E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 PANTHER PTHR30055:SF82 1 194 8.7E-36 T 21-04-2016 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 2.4E-15 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 PANTHER PTHR30055 1 194 8.7E-36 T 21-04-2016 APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APL_RS03070 87ffb6c355f149f41f791e9282c9a185 196 Gene3D G3DSA:1.10.357.10 12 192 2.7E-27 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APL_RS08635 3dfe5a4d51399e017addb60a6ff95115 174 SUPERFAMILY SSF158668 3 169 8.37E-52 T 21-04-2016 APL_RS08635 3dfe5a4d51399e017addb60a6ff95115 174 Gene3D G3DSA:1.20.120.330 5 169 4.0E-52 T 21-04-2016 APL_RS08635 3dfe5a4d51399e017addb60a6ff95115 174 Pfam PF05068 Mannitol repressor 5 169 1.6E-57 T 21-04-2016 IPR007761 Mannitol repressor APL_RS08635 3dfe5a4d51399e017addb60a6ff95115 174 PANTHER PTHR37941 5 171 1.1E-20 T 21-04-2016 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 21-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PANTHER PTHR30115 1 112 4.1E-68 T 21-04-2016 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PRINTS PR00340 P-II protein signature 83 103 1.1E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PRINTS PR00340 P-II protein signature 52 75 1.1E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PRINTS PR00340 P-II protein signature 23 41 1.1E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PRINTS PR00340 P-II protein signature 2 17 1.1E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 PIRSF PIRSF039144 1 112 9.5E-58 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 Gene3D G3DSA:3.30.70.120 1 112 3.4E-53 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.0E-45 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 SMART SM00938 4 105 5.2E-69 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 21-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APL_RS08020 fec5ad9cf26844b1cad0a99712ca64ea 112 SUPERFAMILY SSF54913 1 112 3.08E-47 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APL_RS07275 4bc83dcafb92fb9597e3d54ef02179d0 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 79 1.7E-17 T 21-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS07275 4bc83dcafb92fb9597e3d54ef02179d0 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.978 T 21-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS07275 4bc83dcafb92fb9597e3d54ef02179d0 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 82 3.7E-21 T 21-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APL_RS02795 cf3d130a457e2c8f4e3ab3e339149646 157 SUPERFAMILY SSF52540 11 113 6.12E-31 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02795 cf3d130a457e2c8f4e3ab3e339149646 157 PANTHER PTHR24220 1 112 8.0E-37 T 21-04-2016 APL_RS02795 cf3d130a457e2c8f4e3ab3e339149646 157 Gene3D G3DSA:3.40.50.300 2 112 3.0E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02795 cf3d130a457e2c8f4e3ab3e339149646 157 Pfam PF00005 ABC transporter 11 66 3.2E-12 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 350 36.346 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 PANTHER PTHR21015 4 348 4.9E-126 T 21-04-2016 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 341 6.0E-42 T 21-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 Gene3D G3DSA:3.40.50.2000 2 194 5.1E-76 T 21-04-2016 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 Gene3D G3DSA:3.40.50.2000 249 327 2.0E-5 T 21-04-2016 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 1.7E-49 T 21-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 346 1.1E-118 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 SUPERFAMILY SSF53756 3 350 3.88E-129 T 21-04-2016 APL_RS00090 5a27df4a7f67d06937041e60d44fb858 351 PANTHER PTHR21015:SF22 4 348 4.9E-126 T 21-04-2016 APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 SUPERFAMILY SSF55729 2 145 5.23E-31 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 Gene3D G3DSA:3.40.630.30 2 145 1.1E-33 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 Pfam PF00583 Acetyltransferase (GNAT) family 45 118 2.0E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 PANTHER PTHR23091 1 145 5.4E-33 T 21-04-2016 APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 141 3.2E-41 T 21-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APL_RS10635 4ecc6d70c7888dcd9aea3be1dabdd249 145 PANTHER PTHR23091:SF247 1 145 5.4E-33 T 21-04-2016 APL_RS09095 496705db3e682c8ca07d8a8f7a709398 451 PANTHER PTHR33843:SF4 1 450 8.8E-245 T 21-04-2016 APL_RS09095 496705db3e682c8ca07d8a8f7a709398 451 Pfam PF03611 PTS system sugar-specific permease component 10 405 1.4E-144 T 21-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APL_RS09095 496705db3e682c8ca07d8a8f7a709398 451 PANTHER PTHR33843 1 450 8.8E-245 T 21-04-2016 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 Gene3D G3DSA:1.10.10.600 1 64 2.5E-31 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 3.9E-29 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 PANTHER PTHR37532 1 63 4.6E-28 T 21-04-2016 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 PIRSF PIRSF039003 1 64 7.8E-29 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 SUPERFAMILY SSF140319 1 63 1.19E-24 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APL_RS04825 b8a3f7bc6807e11f0027e79a886ec83e 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.5E-30 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 Pfam PF00588 SpoU rRNA Methylase family 96 237 1.1E-39 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 243 6.1E-91 T 21-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 SMART SM00967 4 80 5.5E-19 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 SUPERFAMILY SSF55315 2 75 2.12E-19 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like APL_RS00210 920c84f98fce5df17ece7222927a3026 247 Gene3D G3DSA:3.40.1280.10 90 244 4.6E-54 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS00210 920c84f98fce5df17ece7222927a3026 247 SUPERFAMILY SSF75217 70 244 1.05E-46 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS00210 920c84f98fce5df17ece7222927a3026 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 8.5E-20 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 Gene3D G3DSA:3.30.1330.30 1 75 5.0E-25 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like APL_RS00210 920c84f98fce5df17ece7222927a3026 247 PANTHER PTHR12029 3 247 1.3E-78 T 21-04-2016 APL_RS00210 920c84f98fce5df17ece7222927a3026 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 244 43.728 T 21-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 463 2.5E-118 T 21-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 Gene3D G3DSA:2.40.160.60 26 463 3.7E-133 T 21-04-2016 APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 PANTHER PTHR35093 1 195 6.1E-166 T 21-04-2016 APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 PANTHER PTHR35093 231 463 6.1E-166 T 21-04-2016 APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 PANTHER PTHR35093:SF3 1 195 6.1E-166 T 21-04-2016 APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 PANTHER PTHR35093:SF3 231 463 6.1E-166 T 21-04-2016 APL_RS04875 41984e32e4d3e159b07340bf66b2cfe0 463 SUPERFAMILY SSF56935 26 463 1.34E-94 T 21-04-2016 APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 SMART SM00382 33 219 1.4E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 SUPERFAMILY SSF52540 5 224 8.67E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 Pfam PF00005 ABC transporter 25 171 1.8E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 PANTHER PTHR24220:SF533 9 243 4.5E-148 T 21-04-2016 APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 PANTHER PTHR24220 9 243 4.5E-148 T 21-04-2016 APL_RS01405 8a85b72c3e0327373d63d689e796cdcd 251 Gene3D G3DSA:3.40.50.300 7 235 5.8E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04110 a17801891ff4f643de8a760005e583f5 663 Gene3D G3DSA:3.40.50.300 18 70 3.3E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04110 a17801891ff4f643de8a760005e583f5 663 Pfam PF12532 Protein of unknown function (DUF3732) 458 659 9.8E-61 T 21-04-2016 IPR022205 Protein of unknown function DUF3732 APL_RS04110 a17801891ff4f643de8a760005e583f5 663 Pfam PF13476 AAA domain 19 237 8.4E-7 T 21-04-2016 APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 SUPERFAMILY SSF51735 6 253 4.0E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 6 5.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 Gene3D G3DSA:3.40.50.720 3 253 5.9E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 1.7E-85 T 21-04-2016 APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PIRSF PIRSF000094 1 260 1.9E-121 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PANTHER PTHR24322:SF317 159 191 7.9E-63 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PANTHER PTHR24322:SF317 11 143 7.9E-63 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PANTHER PTHR24322 159 191 7.9E-63 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS03925 5698a27e8b9119271a236ca54d8bb70a 262 PANTHER PTHR24322 11 143 7.9E-63 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 255 27.491 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 Pfam PF08241 Methyltransferase domain 50 148 6.6E-16 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 254 1.1E-68 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 SUPERFAMILY SSF53335 10 256 3.92E-34 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 PANTHER PTHR10108:SF806 9 240 3.9E-21 T 21-04-2016 APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 PANTHER PTHR10108 9 240 3.9E-21 T 21-04-2016 APL_RS04905 3b3cdcdb28162f1c47bac804829f6bf6 256 Gene3D G3DSA:3.40.50.150 34 255 1.5E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS05530 a672e7767fe472a175879fd410cc2c7b 131 PANTHER PTHR32552 1 131 1.8E-34 T 21-04-2016 APL_RS05530 a672e7767fe472a175879fd410cc2c7b 131 Gene3D G3DSA:3.30.420.10 2 122 4.2E-21 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05530 a672e7767fe472a175879fd410cc2c7b 131 SUPERFAMILY SSF53098 3 124 4.25E-24 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05530 a672e7767fe472a175879fd410cc2c7b 131 Pfam PF13333 Integrase core domain 75 130 1.5E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 SUPERFAMILY SSF53756 1 345 1.57E-94 T 21-04-2016 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 325 6.4E-80 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 PANTHER PTHR30160 1 344 7.7E-106 T 21-04-2016 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 Gene3D G3DSA:3.40.50.2000 1 144 1.3E-51 T 21-04-2016 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 Gene3D G3DSA:3.40.50.2000 167 344 1.3E-54 T 21-04-2016 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 PANTHER PTHR30160:SF7 1 344 7.7E-106 T 21-04-2016 APL_RS07420 f8e97c2c7502b10cccb07ce63eab91b7 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 344 8.6E-153 T 21-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APL_RS02150 10dfdcae608f8743cf140a403e1fbfa2 252 Pfam PF00535 Glycosyl transferase family 2 5 125 2.8E-20 T 21-04-2016 IPR001173 Glycosyltransferase 2-like APL_RS02150 10dfdcae608f8743cf140a403e1fbfa2 252 PANTHER PTHR10859:SF99 1 129 7.5E-31 T 21-04-2016 APL_RS02150 10dfdcae608f8743cf140a403e1fbfa2 252 PANTHER PTHR10859 1 129 7.5E-31 T 21-04-2016 APL_RS02150 10dfdcae608f8743cf140a403e1fbfa2 252 Gene3D G3DSA:3.90.550.10 1 127 2.9E-17 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS02150 10dfdcae608f8743cf140a403e1fbfa2 252 SUPERFAMILY SSF53448 1 140 1.37E-28 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 SUPERFAMILY SSF50182 920 985 4.9E-14 T 21-04-2016 IPR010920 LSM domain APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 489 819 3.4E-95 T 21-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 Pfam PF00924 Mechanosensitive ion channel 878 1076 1.2E-42 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 PANTHER PTHR30347:SF2 1 1092 4.5E-281 T 21-04-2016 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 Gene3D G3DSA:3.30.70.100 990 1074 6.2E-12 T 21-04-2016 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 Gene3D G3DSA:2.30.30.60 935 984 2.3E-14 T 21-04-2016 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 SUPERFAMILY SSF82861 833 917 8.5E-6 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 SUPERFAMILY SSF82689 988 1086 5.75E-16 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 Pfam PF12795 Mechanosensitive ion channel porin domain 43 269 1.1E-25 T 21-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APL_RS03895 cd09a932f2e4d72016045b139f680a92 1102 PANTHER PTHR30347 1 1092 4.5E-281 T 21-04-2016 APL_RS01130 ae5caeecf477cd6d5cfc41f206c40e09 115 Gene3D G3DSA:1.25.40.10 41 110 4.2E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS01130 ae5caeecf477cd6d5cfc41f206c40e09 115 SUPERFAMILY SSF48452 42 111 6.7E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS01130 ae5caeecf477cd6d5cfc41f206c40e09 115 PIRSF PIRSF020555 1 115 1.8E-21 T 21-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats APL_RS01130 ae5caeecf477cd6d5cfc41f206c40e09 115 Pfam PF16068 Domain of unknown function (DUF4810) 29 111 4.9E-28 T 21-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats APL_RS05075 5b414d154403069776729e3a3de19b30 125 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 2.2E-42 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 APL_RS05075 5b414d154403069776729e3a3de19b30 125 PIRSF PIRSF006287 1 124 1.5E-47 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 APL_RS05075 5b414d154403069776729e3a3de19b30 125 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-53 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 APL_RS05075 5b414d154403069776729e3a3de19b30 125 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 123 27.667 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 Gene3D G3DSA:3.30.70.990 9 97 3.1E-32 T 21-04-2016 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 SUPERFAMILY SSF89963 92 163 3.66E-30 T 21-04-2016 IPR007551 Protein of unknown function DUF520 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.123 T 21-04-2016 IPR007551 Protein of unknown function DUF520 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 6.9E-66 T 21-04-2016 IPR007551 Protein of unknown function DUF520 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 PANTHER PTHR30476:SF0 1 163 2.3E-94 T 21-04-2016 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 PANTHER PTHR30476 1 163 2.3E-94 T 21-04-2016 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 Gene3D G3DSA:3.30.70.860 98 163 2.5E-36 T 21-04-2016 APL_RS06425 fd36066dbe0eccb39050b19ce3831268 163 SUPERFAMILY SSF89963 2 88 5.49E-30 T 21-04-2016 IPR007551 Protein of unknown function DUF520 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 158 17.404 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 Pfam PF01252 Signal peptidase (SPase) II 13 152 1.1E-36 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 ProSitePatterns PS00855 Signal peptidases II signature. 100 112 - T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 133 149 2.2E-17 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 2.2E-17 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 97 112 2.2E-17 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 TIGRFAM TIGR00077 lspA: signal peptidase II 4 159 7.1E-55 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 PANTHER PTHR33695:SF1 5 159 6.2E-57 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APL_RS08025 e8437abfa00c6a4d496b98fdee675a8b 160 PANTHER PTHR33695 5 159 6.2E-57 T 21-04-2016 APL_RS08700 3076c83654b7958527c5bdb78f82d46f 219 PANTHER PTHR35568 7 219 4.9E-129 T 21-04-2016 APL_RS08700 3076c83654b7958527c5bdb78f82d46f 219 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 11 117 3.0E-56 T 21-04-2016 IPR013559 YheO-like APL_RS08700 3076c83654b7958527c5bdb78f82d46f 219 Pfam PF08348 YheO-like PAS domain 15 121 1.0E-34 T 21-04-2016 IPR013559 YheO-like APL_RS08700 3076c83654b7958527c5bdb78f82d46f 219 PANTHER PTHR35568:SF3 7 219 4.9E-129 T 21-04-2016 APL_RS08700 3076c83654b7958527c5bdb78f82d46f 219 Pfam PF13309 HTH domain 155 212 2.8E-20 T 21-04-2016 APL_RS01920 1e7e80b6102694d1776c01d6a94e7dae 200 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 195 1.6E-39 T 21-04-2016 IPR018635 Uncharacterised protein family UPF0319 APL_RS01920 1e7e80b6102694d1776c01d6a94e7dae 200 PANTHER PTHR38108 1 200 7.9E-30 T 21-04-2016 APL_RS01920 1e7e80b6102694d1776c01d6a94e7dae 200 PANTHER PTHR38108:SF1 1 200 7.9E-30 T 21-04-2016 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 2.6E-15 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 2.6E-15 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 2.6E-15 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PIRSF PIRSF001220 1 320 9.9E-93 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 21-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 Gene3D G3DSA:3.40.50.40 207 314 2.4E-28 T 21-04-2016 IPR027473 L-asparaginase, C-terminal domain APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 21-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PANTHER PTHR11707 3 312 4.2E-54 T 21-04-2016 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PIRSF PIRSF500176 1 320 4.2E-93 T 21-04-2016 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 SUPERFAMILY SSF53774 3 314 3.27E-97 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 Gene3D G3DSA:3.40.50.1170 2 203 2.5E-63 T 21-04-2016 IPR027474 L-asparaginase, N-terminal APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 PANTHER PTHR11707:SF4 3 312 4.2E-54 T 21-04-2016 IPR029791 Cdc10 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 SMART SM00870 4 319 3.0E-135 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APL_RS03450 9a3febcaf1ccb171ec938ce2dbded7e4 321 Pfam PF00710 Asparaginase, N-terminal 4 191 8.5E-58 T 21-04-2016 IPR027474 L-asparaginase, N-terminal APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Gene3D G3DSA:1.10.3810.10 163 338 6.4E-65 T 21-04-2016 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Gene3D G3DSA:3.30.2060.10 70 157 7.6E-26 T 21-04-2016 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 SUPERFAMILY SSF53955 154 359 1.83E-67 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Gene3D G3DSA:3.40.710.10 339 729 2.8E-102 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Gene3D G3DSA:1.20.5.100 14 53 3.4E-12 T 21-04-2016 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 PANTHER PTHR32282:SF11 152 780 2.7E-250 T 21-04-2016 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Pfam PF00912 Transglycosylase 159 336 4.9E-57 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 PANTHER PTHR32282 152 780 2.7E-250 T 21-04-2016 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 SUPERFAMILY SSF56601 369 728 3.19E-105 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 SUPERFAMILY SSF56601 319 341 3.19E-105 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Pfam PF00905 Penicillin binding protein transpeptidase domain 432 675 5.6E-22 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 PIRSF PIRSF002799 1 782 1.9E-299 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 752 0.0 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS09690 a1d5e9d5de37f0e1904a6abde66c4351 800 Pfam PF14814 Bifunctional transglycosylase second domain 73 154 3.0E-22 T 21-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 SUPERFAMILY SSF50249 6 82 1.54E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 71 4.0E-32 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 24.26 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.2E-35 T 21-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 Pfam PF00366 Ribosomal protein S17 10 76 6.6E-32 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.8E-12 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.8E-12 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.8E-12 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 Gene3D G3DSA:2.40.50.140 6 82 4.8E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 PANTHER PTHR10744 6 83 9.7E-38 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09405 a83eaa51cc9b22d296b4ad309cca754a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 21-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS06270 de147e55575345d2606a84faa5d1d49a 205 PANTHER PTHR33508 1 203 2.1E-38 T 21-04-2016 APL_RS06270 de147e55575345d2606a84faa5d1d49a 205 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 197 6.9E-39 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APL_RS06270 de147e55575345d2606a84faa5d1d49a 205 PANTHER PTHR33508:SF1 1 203 2.1E-38 T 21-04-2016 APL_RS06270 de147e55575345d2606a84faa5d1d49a 205 Pfam PF01914 MarC family integral membrane protein 3 200 2.3E-41 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 SMART SM00382 27 218 2.4E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 PANTHER PTHR24220 4 241 7.1E-154 T 21-04-2016 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 PIRSF PIRSF039085 1 244 4.7E-85 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 PANTHER PTHR24220:SF495 4 241 7.1E-154 T 21-04-2016 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 Pfam PF00005 ABC transporter 20 170 3.7E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 SUPERFAMILY SSF52540 3 232 3.19E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07125 049736df5577f8ddf9105cea22b9f305 244 Gene3D G3DSA:3.40.50.300 2 234 1.5E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 Pfam PF08411 Exonuclease C-terminal 208 469 2.9E-102 T 21-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 SMART SM00479 6 199 0.0055 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 Gene3D G3DSA:3.30.420.10 2 197 2.3E-84 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 PANTHER PTHR11046:SF2 6 508 3.2E-265 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 Pfam PF00929 Exonuclease 9 188 1.4E-28 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 PANTHER PTHR11046 6 508 3.2E-265 T 21-04-2016 APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 SUPERFAMILY SSF53098 6 471 1.58E-133 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03515 3a5cec44b4de6aa20d53840cdb88bb00 514 PIRSF PIRSF000977 1 476 1.8E-202 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 PANTHER PTHR32479 19 417 5.6E-185 T 21-04-2016 APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 30 41 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 24 421 8.5E-218 T 21-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 SUPERFAMILY SSF46548 22 114 1.06E-17 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 PANTHER PTHR32479:SF9 19 417 5.6E-185 T 21-04-2016 APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 Pfam PF02754 Cysteine-rich domain 190 275 6.1E-14 T 21-04-2016 IPR004017 Cysteine-rich domain APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 Pfam PF02754 Cysteine-rich domain 319 403 1.3E-14 T 21-04-2016 IPR004017 Cysteine-rich domain APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 Pfam PF13183 4Fe-4S dicluster domain 27 91 8.7E-10 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS01960 a50c13df39fed5ac514b87f53915a04a 424 Gene3D G3DSA:1.10.1060.10 26 112 2.7E-16 T 21-04-2016 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 Pfam PF00425 chorismate binding enzyme 164 415 5.6E-72 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 Gene3D G3DSA:3.60.120.10 35 424 2.7E-85 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 PANTHER PTHR11236 35 425 4.2E-105 T 21-04-2016 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 PANTHER PTHR11236:SF3 35 425 4.2E-105 T 21-04-2016 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 SUPERFAMILY SSF56322 36 423 2.22E-95 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 425 38.364 T 21-04-2016 APL_RS05445 0f3bc9aad91fb43f5a4452d52d35faad 426 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 421 2.4E-101 T 21-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 201 5.8E-77 T 21-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 SUPERFAMILY SSF53098 8 185 2.62E-54 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 Gene3D G3DSA:3.30.420.10 8 182 1.8E-65 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 8 246 1.7E-89 T 21-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 PANTHER PTHR30231 8 254 2.3E-110 T 21-04-2016 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 PANTHER PTHR30231:SF0 8 254 2.3E-110 T 21-04-2016 APL_RS06725 949e01efceb03b08a076561eef7812a3 257 SMART SM00479 8 185 1.1E-49 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS06725 949e01efceb03b08a076561eef7812a3 257 Pfam PF00929 Exonuclease 10 176 2.6E-38 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.3E-35 T 21-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 Gene3D G3DSA:3.40.47.10 161 315 5.7E-51 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 SUPERFAMILY SSF53901 3 316 9.29E-67 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 182 1.4E-31 T 21-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 PANTHER PTHR18919:SF109 26 316 5.4E-118 T 21-04-2016 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 PANTHER PTHR18919 26 316 5.4E-118 T 21-04-2016 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 67.841 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 Gene3D G3DSA:3.40.47.10 1 160 3.6E-62 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS07320 59bff958a8be743f84ebd445a950bc0b 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.2E-143 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 3.3E-10 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 PANTHER PTHR23416 9 17 1.8E-54 T 21-04-2016 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 PANTHER PTHR23416 40 186 1.8E-54 T 21-04-2016 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 PANTHER PTHR23416:SF53 9 17 1.8E-54 T 21-04-2016 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 PANTHER PTHR23416:SF53 40 186 1.8E-54 T 21-04-2016 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 Gene3D G3DSA:2.160.10.10 43 186 4.6E-51 T 21-04-2016 APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 77 106 0.016 T 21-04-2016 IPR001451 Hexapeptide repeat APL_RS04735 67b8b0965fe1b2c2ea76dd337856f0d7 191 SUPERFAMILY SSF51161 50 185 2.91E-44 T 21-04-2016 IPR011004 Trimeric LpxA-like APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 319 3.5E-31 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 Gene3D G3DSA:3.40.190.10 131 268 4.8E-42 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 PIRSF PIRSF002825 1 340 1.0E-60 T 21-04-2016 IPR026045 Ferric binding protein APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 PANTHER PTHR30006 11 343 3.7E-84 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 PANTHER PTHR30006:SF2 11 343 3.7E-84 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 SUPERFAMILY SSF53850 25 324 2.03E-61 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 Gene3D G3DSA:3.40.190.10 269 317 2.8E-32 T 21-04-2016 APL_RS02960 33520a571d2cbabd9122f1ebe4d9cd2a 343 Gene3D G3DSA:3.40.190.10 4 129 2.8E-32 T 21-04-2016 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 PANTHER PTHR21225:SF7 1 355 7.7E-246 T 21-04-2016 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 Gene3D G3DSA:3.20.20.70 9 355 2.8E-157 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 SUPERFAMILY SSF51569 7 353 3.77E-130 T 21-04-2016 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 354 1.4E-168 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 PANTHER PTHR21225 1 355 7.7E-246 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 Pfam PF00793 DAHP synthetase I family 41 341 5.6E-102 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS03250 570a41045ee30679870e06e120aa96f8 357 PIRSF PIRSF001361 1 357 5.5E-155 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 Hamap MF_00367 GTPase Era [era]. 10 301 36.116 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 TIGRFAM TIGR00436 era: GTP-binding protein Era 13 284 2.7E-122 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 Pfam PF01926 50S ribosome-binding GTPase 15 129 2.1E-24 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 4.66E-6 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 83 101 4.66E-6 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 SUPERFAMILY SSF52540 15 210 1.09E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 Pfam PF07650 KH domain 213 289 1.6E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 PANTHER PTHR11649 1 304 7.1E-126 T 21-04-2016 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 175 5.0E-38 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 SUPERFAMILY SSF54814 186 301 2.42E-42 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 PANTHER PTHR11649:SF3 1 304 7.1E-126 T 21-04-2016 APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 Gene3D G3DSA:3.30.300.20 198 298 5.8E-41 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS02865 5e587b8ebdf5928dca65cda0bd7c17fb 304 Gene3D G3DSA:3.40.50.300 14 197 1.1E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 PANTHER PTHR24960:SF38 1 85 4.2E-29 T 21-04-2016 APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 SUPERFAMILY SSF54862 5 77 2.12E-17 T 21-04-2016 APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 PANTHER PTHR24960 1 85 4.2E-29 T 21-04-2016 APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 Pfam PF00037 4Fe-4S binding domain 7 25 2.9E-5 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS00290 5938033b64ed19f6a0e88e7b346464c2 86 Gene3D G3DSA:3.30.70.20 4 75 2.2E-16 T 21-04-2016 APL_RS05585 a85c922539e50cd91c07a1292d289a4a 165 PANTHER PTHR11431:SF4 3 164 5.9E-44 T 21-04-2016 APL_RS05585 a85c922539e50cd91c07a1292d289a4a 165 Gene3D G3DSA:1.20.1260.10 1 161 1.0E-57 T 21-04-2016 IPR012347 Ferritin-related APL_RS05585 a85c922539e50cd91c07a1292d289a4a 165 PANTHER PTHR11431 3 164 5.9E-44 T 21-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APL_RS05585 a85c922539e50cd91c07a1292d289a4a 165 SUPERFAMILY SSF47240 1 159 6.34E-56 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS05585 a85c922539e50cd91c07a1292d289a4a 165 Pfam PF00210 Ferritin-like domain 7 143 5.3E-41 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 SUPERFAMILY SSF53335 67 278 2.76E-35 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 Gene3D G3DSA:2.60.120.10 1 110 1.7E-53 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 SUPERFAMILY SSF51197 1 101 1.79E-40 T 21-04-2016 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 PANTHER PTHR10108:SF927 5 285 9.7E-99 T 21-04-2016 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 PIRSF PIRSF005215 1 290 9.2E-146 T 21-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 Pfam PF03848 Tellurite resistance protein TehB 90 285 5.0E-99 T 21-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 2.8E-34 T 21-04-2016 IPR015392 Domain of unknown function DUF1971 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 PANTHER PTHR10108 5 285 9.7E-99 T 21-04-2016 APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 Gene3D G3DSA:3.40.50.150 111 288 2.3E-31 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS07105 e1d9adf8a6254ea49826417d6ee01055 290 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 47 288 2.1E-112 T 21-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 100 125 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 364 383 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 391 411 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 70 90 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 1.2E-26 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PANTHER PTHR11958:SF5 1 440 1.2E-232 T 21-04-2016 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 Gene3D G3DSA:1.10.3860.10 22 439 8.4E-99 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 Pfam PF00375 Sodium:dicarboxylate symporter family 29 437 2.4E-103 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 PANTHER PTHR11958 1 440 1.2E-232 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS03180 43eedd3a57d3494e7f29b4d777495dc1 441 SUPERFAMILY SSF118215 28 437 5.75E-95 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 112 5.6E-38 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 Gene3D G3DSA:2.60.300.12 6 99 1.9E-31 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 PANTHER PTHR10072 8 113 2.1E-46 T 21-04-2016 APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.1E-19 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 36.045 T 21-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 APL_RS07715 2eba1a8513cc5e951375abaa112ba57d 113 SUPERFAMILY SSF89360 6 99 8.11E-31 T 21-04-2016 IPR000361 FeS cluster biogenesis APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 Hamap MF_00484 Glycogen synthase [glgA]. 1 477 43.976 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 Pfam PF00534 Glycosyl transferases group 1 283 447 2.2E-14 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 PANTHER PTHR12526:SF17 1 478 2.5E-135 T 21-04-2016 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 477 2.4E-162 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 SUPERFAMILY SSF53756 3 477 9.42E-115 T 21-04-2016 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 Gene3D G3DSA:3.40.50.2000 252 458 2.1E-68 T 21-04-2016 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 PANTHER PTHR12526 1 478 2.5E-135 T 21-04-2016 APL_RS01800 53a5bff5e064f01ff9c425ac05feb87e 478 Pfam PF08323 Starch synthase catalytic domain 2 234 1.0E-70 T 21-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 931 948 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Gene3D G3DSA:2.40.170.20 164 352 8.5E-120 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Gene3D G3DSA:2.40.170.20 554 601 8.5E-120 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Gene3D G3DSA:2.40.170.20 650 948 8.5E-120 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Gene3D G3DSA:2.40.170.20 465 520 8.5E-120 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Gene3D G3DSA:2.170.130.10 51 163 8.1E-24 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 285 948 2.6E-120 T 21-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552:SF18 639 948 5.3E-258 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552:SF18 466 608 5.3E-258 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552:SF18 38 357 5.3E-258 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 SUPERFAMILY SSF56935 450 513 5.23E-88 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 SUPERFAMILY SSF56935 647 948 5.23E-88 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 SUPERFAMILY SSF56935 547 611 5.23E-88 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 SUPERFAMILY SSF56935 22 353 5.23E-88 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 158 2.6E-15 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 Pfam PF00593 TonB dependent receptor 658 946 1.7E-29 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552 639 948 5.3E-258 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552 466 608 5.3E-258 T 21-04-2016 APL_RS05470 7d0611d5379c30b13a40774dda95ec89 948 PANTHER PTHR32552 38 357 5.3E-258 T 21-04-2016 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 Gene3D G3DSA:3.40.50.1980 144 313 9.8E-48 T 21-04-2016 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 71 89 4.7E-13 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 204 219 4.7E-13 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 292 305 4.7E-13 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 102 117 4.7E-13 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 228 246 4.7E-13 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PANTHER PTHR30532:SF1 55 312 1.7E-25 T 21-04-2016 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 PANTHER PTHR30532 55 312 1.7E-25 T 21-04-2016 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 Pfam PF01497 Periplasmic binding protein 55 257 3.5E-15 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 Gene3D G3DSA:3.40.50.1980 50 136 8.3E-21 T 21-04-2016 APL_RS10670 accc4b81051122615f3c06e1eac4f774 318 SUPERFAMILY SSF53807 55 311 3.1E-43 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 PANTHER PTHR30006 1 321 5.2E-94 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 Gene3D G3DSA:3.40.190.10 256 317 1.4E-16 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 Gene3D G3DSA:3.40.190.10 6 118 1.4E-16 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 Pfam PF13531 Bacterial extracellular solute-binding protein 65 272 1.0E-18 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 Gene3D G3DSA:3.40.190.10 123 255 8.9E-21 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 SUPERFAMILY SSF53850 23 320 6.99E-55 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 PANTHER PTHR30006:SF3 1 321 5.2E-94 T 21-04-2016 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 316 2.7E-111 T 21-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 APL_RS00895 79997f2014405c45270cc0dfd56692f7 321 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 12 318 5.5E-128 T 21-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 Pfam PF01168 Alanine racemase, N-terminal domain 8 237 1.4E-67 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PANTHER PTHR30511 1 118 2.0E-194 T 21-04-2016 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PANTHER PTHR30511 134 373 2.0E-194 T 21-04-2016 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 Hamap MF_01201 Alanine racemase. 1 374 33.858 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 Gene3D G3DSA:2.40.37.10 230 371 5.7E-53 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 Gene3D G3DSA:3.20.20.10 11 229 3.9E-67 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 SUPERFAMILY SSF50621 244 372 3.21E-45 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 356 369 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 304 321 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 61 79 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 283 298 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 26 42 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 266 281 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PRINTS PR00992 Alanine racemase signature 210 237 1.1E-54 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 SUPERFAMILY SSF51419 8 251 3.63E-59 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 SMART SM01005 250 374 4.6E-67 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 TIGRFAM TIGR00492 alr: alanine racemase 3 373 5.4E-119 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 Pfam PF00842 Alanine racemase, C-terminal domain 250 369 3.3E-37 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PANTHER PTHR30511:SF4 1 118 2.0E-194 T 21-04-2016 APL_RS01290 52ff30a0a5a31033eba1525ced51907c 374 PANTHER PTHR30511:SF4 134 373 2.0E-194 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 238 2.7E-60 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 SMART SM00062 21 239 2.5E-67 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 SUPERFAMILY SSF53850 1 238 3.92E-61 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 Gene3D G3DSA:3.40.190.10 19 107 2.9E-42 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 Gene3D G3DSA:3.40.190.10 199 237 2.9E-42 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 44 57 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 PANTHER PTHR18966:SF152 17 239 1.2E-69 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 PANTHER PTHR18966 17 239 1.2E-69 T 21-04-2016 APL_RS07120 f7d58087b8d94b5cf59b855dcdb34196 239 Gene3D G3DSA:3.40.190.10 113 197 4.2E-19 T 21-04-2016 APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 PANTHER PTHR38604:SF1 46 139 2.1E-42 T 21-04-2016 APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 Gene3D G3DSA:4.10.1020.10 52 119 5.7E-31 T 21-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 PIRSF PIRSF006105 1 140 2.6E-45 T 21-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 SUPERFAMILY SSF48695 25 137 7.11E-40 T 21-04-2016 IPR011031 Multihaem cytochrome APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 PANTHER PTHR38604 46 139 2.1E-42 T 21-04-2016 APL_RS07535 3bd0aa1d4a6979b8393b2a33a9d40a17 140 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 30 132 3.6E-39 T 21-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 Pfam PF00425 chorismate binding enzyme 70 314 6.3E-62 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 PRINTS PR00095 Anthranilate synthase component I signature 271 285 3.3E-9 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 PRINTS PR00095 Anthranilate synthase component I signature 257 271 3.3E-9 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 PRINTS PR00095 Anthranilate synthase component I signature 173 186 3.3E-9 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 PRINTS PR00095 Anthranilate synthase component I signature 159 172 3.3E-9 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 Gene3D G3DSA:3.60.120.10 55 317 1.0E-69 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 PANTHER PTHR11236 60 315 3.7E-69 T 21-04-2016 APL_RS05995 ca88c96f8bf25ee9ca57537c6fea7cae 322 SUPERFAMILY SSF56322 44 321 4.71E-69 T 21-04-2016 IPR005801 ADC synthase GO:0009058 APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 PANTHER PTHR24220:SF368 9 264 2.5E-180 T 21-04-2016 APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 Pfam PF00005 ABC transporter 23 171 4.7E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 SUPERFAMILY SSF52540 7 238 6.19E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 Gene3D G3DSA:3.40.50.300 7 238 5.0E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 SMART SM00382 32 229 1.3E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS06780 0d99e7744e602f03943936c57bfd49ee 267 PANTHER PTHR24220 9 264 2.5E-180 T 21-04-2016 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 297 2.6E-68 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 2.3E-123 T 21-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 SUPERFAMILY SSF53756 1 317 2.51E-71 T 21-04-2016 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 PANTHER PTHR30160 1 293 3.4E-120 T 21-04-2016 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 PANTHER PTHR30160:SF8 1 293 3.4E-120 T 21-04-2016 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 Gene3D G3DSA:3.40.50.2000 172 317 1.4E-34 T 21-04-2016 APL_RS07415 8c15f7f07717bc4f934dba66db02f7b7 319 Gene3D G3DSA:3.40.50.2000 1 158 8.3E-32 T 21-04-2016 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.3E-52 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 Pfam PF00459 Inositol monophosphatase family 2 260 6.6E-72 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 Gene3D G3DSA:3.40.190.80 155 265 1.7E-36 T 21-04-2016 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 21-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 1.3E-20 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 1.3E-20 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 1.3E-20 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 1.3E-20 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 21-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 Gene3D G3DSA:3.30.540.10 2 154 4.2E-53 T 21-04-2016 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PANTHER PTHR20854:SF4 1 270 5.8E-101 T 21-04-2016 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 PANTHER PTHR20854 1 270 5.8E-101 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APL_RS01055 8a64471e5a2f11b360a8ddae4c2e8697 270 SUPERFAMILY SSF56655 1 264 4.19E-83 T 21-04-2016 APL_RS10005 c92b2f05329f99e6385576d06d89a81a 250 Gene3D G3DSA:3.40.50.1820 2 247 3.1E-27 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS10005 c92b2f05329f99e6385576d06d89a81a 250 Pfam PF00756 Putative esterase 12 239 8.5E-17 T 21-04-2016 IPR000801 Putative esterase APL_RS10005 c92b2f05329f99e6385576d06d89a81a 250 SUPERFAMILY SSF53474 3 246 7.51E-25 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 PIRSF PIRSF000460 3 823 4.4E-231 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 652 664 - T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 Gene3D G3DSA:3.40.50.2000 9 477 1.6E-195 T 21-04-2016 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 Pfam PF00343 Carbohydrate phosphorylase 99 805 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 Gene3D G3DSA:3.40.50.2000 478 790 2.4E-139 T 21-04-2016 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 PANTHER PTHR11468 8 833 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 SUPERFAMILY SSF53756 10 809 0.0 T 21-04-2016 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 805 0.0 T 21-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APL_RS01805 6328bd62b1197bdaa0a89c27690c4ac7 834 PANTHER PTHR11468:SF3 8 833 0.0 T 21-04-2016 APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 SMART SM00851 25 118 3.8E-19 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 21-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 Gene3D G3DSA:3.40.50.1380 3 151 4.0E-59 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 2.2E-64 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 34.833 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 PANTHER PTHR30492 2 151 2.2E-78 T 21-04-2016 APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 Pfam PF02142 MGS-like domain 33 117 3.7E-17 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 SUPERFAMILY SSF52335 4 147 5.23E-52 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain APL_RS07900 5112ff31fd754777f098a052e525d6c6 152 PIRSF PIRSF006614 8 151 8.2E-61 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APL_RS04500 f1eeb8dbac210172945df7f8701b265a 252 PANTHER PTHR13504 1 243 1.8E-49 T 21-04-2016 APL_RS04500 f1eeb8dbac210172945df7f8701b265a 252 SUPERFAMILY SSF140931 68 243 1.83E-47 T 21-04-2016 IPR003812 Fido domain APL_RS04500 f1eeb8dbac210172945df7f8701b265a 252 Pfam PF02661 Fic/DOC family 92 190 3.8E-26 T 21-04-2016 IPR003812 Fido domain APL_RS04500 f1eeb8dbac210172945df7f8701b265a 252 Gene3D G3DSA:1.10.3290.10 3 242 2.5E-67 T 21-04-2016 IPR003812 Fido domain APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 SUPERFAMILY SSF48013 3 133 6.54E-41 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 Gene3D G3DSA:1.10.940.10 5 133 5.1E-41 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 8.8E-40 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 Pfam PF01029 NusB family 7 131 2.1E-30 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 22.744 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 APL_RS01030 9885da5f0895d9182604540eb81cd2c0 137 PANTHER PTHR11078 1 134 1.6E-47 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 205 336 1.2E-44 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 SUPERFAMILY SSF53448 7 191 7.43E-30 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 PANTHER PTHR19136:SF81 1 192 1.2E-44 T 21-04-2016 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Gene3D G3DSA:3.40.50.300 186 211 3.4E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Gene3D G3DSA:3.40.50.300 212 362 3.9E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 SUPERFAMILY SSF52540 202 361 1.23E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Pfam PF12804 MobA-like NTP transferase domain 9 163 3.2E-30 T 21-04-2016 IPR025877 MobA-like NTP transferase APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 PANTHER PTHR19136 1 192 1.2E-44 T 21-04-2016 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 192 2.2E-69 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 194 27.9 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 205 360 8.1E-42 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APL_RS09930 95cbada6f1a68fa2c58231c768d9a716 363 Gene3D G3DSA:3.90.550.10 5 185 8.8E-48 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS02640 c0b3b511219b2e7f51e86f443979f6ca 180 PANTHER PTHR38107:SF1 11 180 1.6E-62 T 21-04-2016 APL_RS02640 c0b3b511219b2e7f51e86f443979f6ca 180 PANTHER PTHR38107 11 180 1.6E-62 T 21-04-2016 APL_RS02640 c0b3b511219b2e7f51e86f443979f6ca 180 Gene3D G3DSA:1.10.530.40 35 180 4.9E-52 T 21-04-2016 IPR023347 Lysozyme domain GO:0003796 APL_RS02640 c0b3b511219b2e7f51e86f443979f6ca 180 SUPERFAMILY SSF53955 16 180 9.72E-55 T 21-04-2016 IPR023346 Lysozyme-like domain APL_RS02640 c0b3b511219b2e7f51e86f443979f6ca 180 Pfam PF00959 Phage lysozyme 61 171 1.8E-26 T 21-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 PIRSF PIRSF002131 1 129 2.7E-53 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 21-04-2016 IPR018102 Ribosomal S11, conserved site APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.95 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 SUPERFAMILY SSF53137 15 129 2.55E-48 T 21-04-2016 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 Gene3D G3DSA:3.30.420.80 8 129 4.3E-55 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.3E-56 T 21-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 Pfam PF00411 Ribosomal protein S11 19 128 3.4E-54 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APL_RS09475 bf94b8a89cbcb7b74d134afee1f328c4 129 PANTHER PTHR11759 11 129 1.5E-74 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 PANTHER PTHR24031:SF173 9 399 1.2E-248 T 21-04-2016 APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 PANTHER PTHR24031 9 399 1.2E-248 T 21-04-2016 APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 7 386 50.205 T 21-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 SUPERFAMILY SSF52540 81 359 9.98E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 Pfam PF00271 Helicase conserved C-terminal domain 239 348 4.7E-28 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 Gene3D G3DSA:3.40.50.300 7 228 7.7E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 SMART SM00490 267 348 6.5E-31 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 Gene3D G3DSA:3.40.50.300 229 379 4.9E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 SMART SM00487 27 231 5.5E-50 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS02945 3af7ace834eb15bec82eb909cd6c6e92 406 Pfam PF00270 DEAD/DEAH box helicase 32 204 6.7E-46 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APL_RS10075 fc4aefcd2037fe962a8841145a7b03fa 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 260 5.0E-47 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APL_RS10075 fc4aefcd2037fe962a8841145a7b03fa 263 PANTHER PTHR30269:SF18 1 263 1.7E-89 T 21-04-2016 APL_RS10075 fc4aefcd2037fe962a8841145a7b03fa 263 PANTHER PTHR30269 1 263 1.7E-89 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 140 8.8E-28 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 Gene3D G3DSA:1.10.287.460 19 120 1.2E-25 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 PANTHER PTHR10516 113 237 1.6E-44 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 148 234 2.8E-29 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 SUPERFAMILY SSF54534 34 237 8.61E-57 T 21-04-2016 APL_RS08695 2a0234559115372fa6d2b837d28d57ad 243 Gene3D G3DSA:3.10.50.40 121 240 2.5E-50 T 21-04-2016 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 PANTHER PTHR13420 12 97 9.7E-24 T 21-04-2016 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 SUPERFAMILY SSF69786 9 97 7.32E-30 T 21-04-2016 IPR003746 Protein of unknown function DUF167 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 SMART SM01152 9 85 2.0E-32 T 21-04-2016 IPR003746 Protein of unknown function DUF167 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 9 95 18.576 T 21-04-2016 IPR003746 Protein of unknown function DUF167 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 2.0E-24 T 21-04-2016 IPR003746 Protein of unknown function DUF167 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 Gene3D G3DSA:3.30.1200.10 9 93 1.9E-28 T 21-04-2016 IPR003746 Protein of unknown function DUF167 APL_RS07300 5517ed0d0624980d03095df7550e730b 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 12 93 6.7E-19 T 21-04-2016 IPR005228 Conserved hypothetical protein CHP00251 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 Pfam PF04002 RadC-like JAB domain 102 218 1.4E-45 T 21-04-2016 IPR025657 RadC-like JAB domain APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 169 174 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 SUPERFAMILY SSF102712 145 190 8.11E-6 T 21-04-2016 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 SUPERFAMILY SSF47781 12 85 1.22E-7 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 PANTHER PTHR30471 6 220 1.8E-109 T 21-04-2016 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 PANTHER PTHR30471:SF5 6 220 1.8E-109 T 21-04-2016 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 Gene3D G3DSA:3.40.140.10 96 218 5.6E-49 T 21-04-2016 APL_RS10435 b77d38a2b5d1795b83b426ba99a1568d 220 TIGRFAM TIGR00608 radc: DNA repair protein RadC 7 217 1.2E-81 T 21-04-2016 IPR001405 RadC protein APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169:SF48 761 844 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169:SF48 2 417 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169:SF48 449 731 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Gene3D G3DSA:2.120.10.90 529 871 1.7E-135 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169 761 844 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169 2 417 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 PANTHER PTHR10169 449 731 0.0 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 SMART SM00434 11 498 4.9E-297 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 SUPERFAMILY SSF101904 532 730 7.72E-104 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 SUPERFAMILY SSF101904 760 883 7.72E-104 T 21-04-2016 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 825 871 9.9E-14 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 732 3.3E-10 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 638 1.4E-8 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 775 821 3.4E-12 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 4.4E-11 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 691 2.6E-8 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.1E-155 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Gene3D G3DSA:3.90.199.10 34 216 4.5E-82 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 872 0.0 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 SUPERFAMILY SSF56719 30 520 7.72E-183 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Gene3D G3DSA:1.10.268.10 362 495 2.7E-49 T 21-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APL_RS01480 b062920877cdb77e199c399c33a68894 896 Gene3D G3DSA:3.30.1360.40 236 332 2.5E-37 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain APL_RS01480 b062920877cdb77e199c399c33a68894 896 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 30.131 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APL_RS04975 354bf2120c0efc1d029dc9d0a2d07726 344 Pfam PF12760 Transposase zinc-ribbon domain 23 70 1.4E-16 T 21-04-2016 IPR024442 Transposase, zinc-ribbon APL_RS04975 354bf2120c0efc1d029dc9d0a2d07726 344 Pfam PF12762 ISXO2-like transposase domain 138 302 8.8E-52 T 21-04-2016 IPR024445 ISXO2-like transposase domain APL_RS04975 354bf2120c0efc1d029dc9d0a2d07726 344 SMART SM01126 138 302 1.1E-57 T 21-04-2016 IPR024445 ISXO2-like transposase domain APL_RS05855 220e900ed18975e51009ca73808a1fa1 237 Pfam PF14256 YwiC-like protein 8 131 2.0E-36 T 21-04-2016 IPR025576 YwiC-like protein APL_RS04630 4867de757043ba92633786ecee7aae9b 434 PANTHER PTHR18919:SF5 12 140 6.1E-109 T 21-04-2016 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 PANTHER PTHR18919:SF5 160 434 6.1E-109 T 21-04-2016 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Pfam PF02803 Thiolase, C-terminal domain 294 432 9.1E-21 T 21-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 93 111 - T 21-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 432 8.5E-90 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Pfam PF00108 Thiolase, N-terminal domain 14 286 2.2E-47 T 21-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 PIRSF PIRSF000429 8 434 4.0E-85 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Gene3D G3DSA:3.40.47.10 14 132 5.6E-41 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Gene3D G3DSA:3.40.47.10 219 298 5.6E-41 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Gene3D G3DSA:3.40.47.10 173 218 5.3E-31 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 Gene3D G3DSA:3.40.47.10 300 433 5.3E-31 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 PANTHER PTHR18919 12 140 6.1E-109 T 21-04-2016 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 PANTHER PTHR18919 160 434 6.1E-109 T 21-04-2016 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 SUPERFAMILY SSF53901 11 132 5.34E-44 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS04630 4867de757043ba92633786ecee7aae9b 434 SUPERFAMILY SSF53901 250 432 5.34E-44 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 PANTHER PTHR26402 1 206 7.4E-114 T 21-04-2016 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 Gene3D G3DSA:3.40.50.2300 3 109 1.8E-31 T 21-04-2016 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 Pfam PF00072 Response regulator receiver domain 5 100 1.3E-20 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 SMART SM00448 1 99 5.8E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 PANTHER PTHR26402:SF576 1 206 7.4E-114 T 21-04-2016 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 SUPERFAMILY SSF52172 2 114 3.27E-31 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 SMART SM00862 131 206 1.6E-27 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 207 2.7E-94 T 21-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 Gene3D G3DSA:1.10.10.10 110 208 1.1E-33 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 Pfam PF00486 Transcriptional regulatory protein, C terminal 132 206 9.4E-27 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS06560 098491deedf803bff7f4fe1908e7a24e 213 SUPERFAMILY SSF46894 104 206 1.02E-31 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS03990 a1ad705453806628594c7252b1a5515b 764 PANTHER PTHR30619 6 758 5.7E-151 T 21-04-2016 APL_RS03990 a1ad705453806628594c7252b1a5515b 764 SMART SM00849 514 703 0.0091 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS03990 a1ad705453806628594c7252b1a5515b 764 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 213 410 4.3E-34 T 21-04-2016 IPR004477 ComEC/Rec2-related protein APL_RS03990 a1ad705453806628594c7252b1a5515b 764 Gene3D G3DSA:3.60.15.10 525 735 1.5E-22 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS03990 a1ad705453806628594c7252b1a5515b 764 PANTHER PTHR30619:SF2 6 758 5.7E-151 T 21-04-2016 APL_RS03990 a1ad705453806628594c7252b1a5515b 764 Pfam PF00753 Metallo-beta-lactamase superfamily 525 701 1.0E-9 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS03990 a1ad705453806628594c7252b1a5515b 764 Pfam PF03772 Competence protein 192 469 2.5E-57 T 21-04-2016 IPR004477 ComEC/Rec2-related protein APL_RS03990 a1ad705453806628594c7252b1a5515b 764 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 64 732 2.2E-161 T 21-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 APL_RS03990 a1ad705453806628594c7252b1a5515b 764 SUPERFAMILY SSF56281 504 755 5.6E-42 T 21-04-2016 IPR001279 Metallo-beta-lactamase APL_RS03990 a1ad705453806628594c7252b1a5515b 764 Pfam PF13567 Domain of unknown function (DUF4131) 16 160 2.8E-7 T 21-04-2016 IPR025405 Domain of unknown function DUF4131 APL_RS02205 68f60abd951e078c64b27341b838895f 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.1E-43 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS02205 68f60abd951e078c64b27341b838895f 129 PANTHER PTHR11803 1 128 8.2E-53 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS02205 68f60abd951e078c64b27341b838895f 129 SUPERFAMILY SSF55298 1 128 2.2E-43 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS02205 68f60abd951e078c64b27341b838895f 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 21-04-2016 IPR019897 RidA, conserved site APL_RS02205 68f60abd951e078c64b27341b838895f 129 Gene3D G3DSA:3.30.1330.40 4 128 2.4E-46 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS02205 68f60abd951e078c64b27341b838895f 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 2.4E-52 T 21-04-2016 IPR006056 RidA family APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 1.2E-42 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.0E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 Gene3D G3DSA:2.40.50.140 1 123 3.1E-65 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 SUPERFAMILY SSF50249 3 123 4.28E-52 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PIRSF PIRSF002133 1 124 4.6E-54 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 PANTHER PTHR11652 1 116 6.4E-76 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.938 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS07410 e75b6e05052f7d92c58a35e0c6a3a07f 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.0E-70 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 PANTHER PTHR11260:SF256 1 191 1.3E-19 T 21-04-2016 APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 SUPERFAMILY SSF47616 72 192 3.19E-9 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 Gene3D G3DSA:1.20.1050.10 92 194 5.3E-4 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 192 2.2E-4 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 SUPERFAMILY SSF52833 1 89 1.79E-14 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 Gene3D G3DSA:3.40.30.10 1 91 3.6E-17 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 80 9.0E-13 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APL_RS08570 4ca2c07d823811c10098d5fc07b36176 205 PANTHER PTHR11260 1 191 1.3E-19 T 21-04-2016 APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 PANTHER PTHR34128 1 175 1.8E-76 T 21-04-2016 APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 32.106 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 SUPERFAMILY SSF82093 30 143 2.88E-38 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 Gene3D G3DSA:2.40.50.140 26 132 1.4E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 Pfam PF03100 CcmE 4 138 4.1E-45 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APL_RS07210 8f0687959eec8a5453709b6d1e3d8b02 181 PANTHER PTHR34128:SF1 1 175 1.8E-76 T 21-04-2016 APL_RS02680 a842963422d68dd81124ffcce6aa8276 100 Gene3D G3DSA:2.40.10.210 41 91 5.0E-6 T 21-04-2016 APL_RS02680 a842963422d68dd81124ffcce6aa8276 100 Pfam PF13856 ATP-binding sugar transporter from pro-phage 1 99 5.5E-46 T 21-04-2016 IPR025601 ATP-binding sugar transporter-like protein APL_RS02680 a842963422d68dd81124ffcce6aa8276 100 SUPERFAMILY SSF69279 1 100 2.21E-13 T 21-04-2016 APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 Gene3D G3DSA:3.20.20.100 7 291 1.5E-64 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 Pfam PF00248 Aldo/keto reductase family 15 287 2.7E-53 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 PANTHER PTHR11732 1 300 1.0E-117 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 PRINTS PR00069 Aldo-keto reductase signature 112 130 5.2E-5 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 PRINTS PR00069 Aldo-keto reductase signature 143 160 5.2E-5 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 PANTHER PTHR11732:SF10 1 300 1.0E-117 T 21-04-2016 APL_RS07465 510a75a4d605f47f1294bd882ec04fba 300 SUPERFAMILY SSF51430 7 291 1.44E-69 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 1.5E-40 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PIRSF PIRSF000349 1 209 1.9E-78 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 SUPERFAMILY SSF46609 1 90 1.24E-34 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.3E-26 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.3E-26 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 6.3E-26 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 6.3E-26 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 6.3E-26 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.9E-30 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 SUPERFAMILY SSF54719 95 205 4.98E-46 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 PANTHER PTHR11404 1 204 1.2E-104 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 Gene3D G3DSA:1.10.287.990 20 90 1.3E-32 T 21-04-2016 APL_RS01285 eb1d2c780d2e0c3a158bbddaa2cb1ad3 213 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 21-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 PANTHER PTHR34986 2 155 4.8E-52 T 21-04-2016 APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 Pfam PF04074 Domain of unknown function (DUF386) 1 151 2.2E-38 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 PANTHER PTHR34986:SF2 2 155 4.8E-52 T 21-04-2016 APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 SUPERFAMILY SSF51197 1 155 5.49E-47 T 21-04-2016 APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 Gene3D G3DSA:2.60.120.370 1 153 1.4E-45 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family APL_RS03685 6668c258ab7987cc4964a70ca86324d4 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 5.1E-41 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 Pfam PF05175 Methyltransferase small domain 141 227 3.7E-18 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 21 303 4.1E-132 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 PANTHER PTHR18895:SF66 1 306 9.7E-163 T 21-04-2016 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 PIRSF PIRSF037167 7 314 6.9E-147 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 312 6.4E-96 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 14 308 50.857 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 PANTHER PTHR18895 1 306 9.7E-163 T 21-04-2016 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 Gene3D G3DSA:1.10.8.10 23 114 5.4E-6 T 21-04-2016 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 212 218 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 SUPERFAMILY SSF53335 23 299 2.84E-49 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04925 aaf3c8f46a7698b10a8999739503fc9a 314 Gene3D G3DSA:3.40.50.150 116 293 5.3E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02780 725fb550a7a787f4583777e667e4d87e 331 PANTHER PTHR40659 6 330 1.6E-57 T 21-04-2016 APL_RS02780 725fb550a7a787f4583777e667e4d87e 331 Pfam PF03824 High-affinity nickel-transport protein 57 318 1.2E-43 T 21-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 PANTHER PTHR10516:SF320 19 67 2.1E-62 T 21-04-2016 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 PANTHER PTHR10516:SF320 89 208 2.1E-62 T 21-04-2016 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 Gene3D G3DSA:3.10.50.40 97 208 2.0E-47 T 21-04-2016 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 6 111 1.0E-24 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 SUPERFAMILY SSF54534 12 208 9.43E-59 T 21-04-2016 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 Gene3D G3DSA:1.10.287.460 7 96 1.8E-25 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 119 206 1.2E-28 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 PANTHER PTHR10516 19 67 2.1E-62 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APL_RS09045 e7467ac558dc774ee614331e0a92d313 209 PANTHER PTHR10516 89 208 2.1E-62 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 SUPERFAMILY SSF103473 8 377 4.45E-40 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 Gene3D G3DSA:1.20.1250.20 198 374 1.3E-22 T 21-04-2016 APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 Gene3D G3DSA:1.20.1250.20 6 190 6.3E-18 T 21-04-2016 APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 PIRSF PIRSF004925 2 383 4.4E-98 T 21-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 PANTHER PTHR23522 1 377 2.1E-95 T 21-04-2016 APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 PANTHER PTHR23522:SF3 1 377 2.1E-95 T 21-04-2016 APL_RS00820 797722ebb33dd9503da478aed5f3b3c5 384 Pfam PF12832 MFS_1 like family 14 361 4.4E-38 T 21-04-2016 IPR024989 Major facilitator superfamily associated domain APL_RS10515 d7e7ea7e5e1b186ffd9b1b72fdc16a43 210 SUPERFAMILY SSF55718 20 125 2.27E-8 T 21-04-2016 IPR003033 SCP2 sterol-binding domain APL_RS10515 d7e7ea7e5e1b186ffd9b1b72fdc16a43 210 PANTHER PTHR38693 4 209 4.4E-37 T 21-04-2016 APL_RS10515 d7e7ea7e5e1b186ffd9b1b72fdc16a43 210 Pfam PF02036 SCP-2 sterol transfer family 23 121 8.7E-21 T 21-04-2016 IPR003033 SCP2 sterol-binding domain APL_RS10515 d7e7ea7e5e1b186ffd9b1b72fdc16a43 210 PANTHER PTHR38693:SF1 4 209 4.4E-37 T 21-04-2016 APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 SUPERFAMILY SSF89155 10 198 1.31E-41 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 PANTHER PTHR34227:SF1 2 197 8.0E-31 T 21-04-2016 APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 Pfam PF02613 Nitrate reductase delta subunit 53 171 6.3E-25 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 Gene3D G3DSA:1.10.3480.10 10 197 3.9E-38 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 Hamap MF_01150 Chaperone protein TorD [torD]. 4 198 29.208 T 21-04-2016 IPR023069 Chaperone TorD APL_RS09550 cdb23ad08d9deb7f9e2913cfb43b0d5c 199 PANTHER PTHR34227 2 197 8.0E-31 T 21-04-2016 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 Gene3D G3DSA:3.40.50.2020 161 288 3.1E-51 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.2E-49 T 21-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 315 49.388 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 SUPERFAMILY SSF53271 69 307 2.91E-63 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 21-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 PANTHER PTHR10210:SF41 1 315 3.0E-184 T 21-04-2016 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 Gene3D G3DSA:3.40.50.2020 1 160 1.1E-72 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 SMART SM01400 4 121 1.1E-77 T 21-04-2016 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 PANTHER PTHR10210 1 315 3.0E-184 T 21-04-2016 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 7.3E-31 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APL_RS04055 de39a0592db5176224d6d87d01beca4a 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 315 2.5E-123 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 SMART SM00825 Beta-ketoacyl synthase 4 405 1.9E-14 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 Gene3D G3DSA:3.40.47.10 262 404 6.4E-53 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 SUPERFAMILY SSF53901 213 403 1.69E-62 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 SUPERFAMILY SSF53901 1 252 1.55E-66 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 1.3E-44 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 Gene3D G3DSA:3.40.47.10 6 258 5.9E-59 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 6.3E-32 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APL_RS05510 d9ac1283066c7df05e2d04c6e60d15ce 406 PANTHER PTHR11712 1 404 1.4E-174 T 21-04-2016 APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 ProSitePatterns PS01318 TsaA-like domain signature. 89 100 - T 21-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 5 151 6.7E-55 T 21-04-2016 IPR023370 TsaA-like domain APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 PANTHER PTHR12818 1 242 1.9E-107 T 21-04-2016 APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 SUPERFAMILY SSF118196 5 231 4.45E-82 T 21-04-2016 IPR023370 TsaA-like domain APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 PANTHER PTHR12818:SF6 1 242 1.9E-107 T 21-04-2016 APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 Pfam PF01980 Uncharacterised protein family UPF0066 23 145 4.7E-42 T 21-04-2016 IPR023370 TsaA-like domain APL_RS07700 1469d8e502926ae6955b6cff87438cd2 251 Gene3D G3DSA:2.40.30.70 7 159 2.8E-53 T 21-04-2016 IPR023370 TsaA-like domain APL_RS04245 a238efef8606eb90bb88f531ea41b47e 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 392 1.9E-74 T 21-04-2016 IPR003776 YcaO-like domain APL_RS04245 a238efef8606eb90bb88f531ea41b47e 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 405 4.9E-157 T 21-04-2016 IPR003776 YcaO-like domain APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 3.2E-42 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PANTHER PTHR30302 1 165 1.7E-50 T 21-04-2016 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 Pfam PF01750 Hydrogenase maturation protease 20 143 2.4E-29 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 Gene3D G3DSA:3.40.50.1450 1 153 3.7E-46 T 21-04-2016 IPR023430 Peptidase HybD-like domain APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 SUPERFAMILY SSF53163 1 153 3.92E-41 T 21-04-2016 IPR023430 Peptidase HybD-like domain APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PANTHER PTHR30302:SF1 1 165 1.7E-50 T 21-04-2016 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PRINTS PR00446 Hydrogen uptake protein signature 35 52 3.2E-17 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PRINTS PR00446 Hydrogen uptake protein signature 67 83 3.2E-17 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.2E-17 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PRINTS PR00446 Hydrogen uptake protein signature 56 66 3.2E-17 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS07000 ff7b4c56d4eed0c4e20acda367862c7b 165 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.2E-17 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 86 99 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 PANTHER PTHR10314:SF78 21 361 7.0E-72 T 21-04-2016 APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 SUPERFAMILY SSF53686 3 361 1.11E-87 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 PANTHER PTHR10314 21 361 7.0E-72 T 21-04-2016 APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 Gene3D G3DSA:3.40.50.1100 130 361 3.1E-54 T 21-04-2016 APL_RS01395 60368d5cc910cc408e57c72e2d7f7ead 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 65 357 9.6E-66 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS09100 bbd59ba9710677e84d6af9dbae79f97a 90 Gene3D G3DSA:3.40.50.270 2 83 5.6E-12 T 21-04-2016 APL_RS09100 bbd59ba9710677e84d6af9dbae79f97a 90 SUPERFAMILY SSF52794 1 86 2.35E-20 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS09100 bbd59ba9710677e84d6af9dbae79f97a 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 4.0E-15 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS09100 bbd59ba9710677e84d6af9dbae79f97a 90 PANTHER PTHR33843:SF2 1 89 9.4E-26 T 21-04-2016 APL_RS09100 bbd59ba9710677e84d6af9dbae79f97a 90 PANTHER PTHR33843 1 89 9.4E-26 T 21-04-2016 APL_RS04455 4e7cb4463af559669279a88933cf06be 268 Gene3D G3DSA:3.40.50.300 10 262 4.6E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04455 4e7cb4463af559669279a88933cf06be 268 PANTHER PTHR24220:SF336 13 265 1.6E-106 T 21-04-2016 APL_RS04455 4e7cb4463af559669279a88933cf06be 268 Pfam PF00005 ABC transporter 37 189 3.4E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04455 4e7cb4463af559669279a88933cf06be 268 PANTHER PTHR24220 13 265 1.6E-106 T 21-04-2016 APL_RS04455 4e7cb4463af559669279a88933cf06be 268 SMART SM00382 46 238 6.1E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04455 4e7cb4463af559669279a88933cf06be 268 SUPERFAMILY SSF52540 12 260 8.42E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04455 4e7cb4463af559669279a88933cf06be 268 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 PANTHER PTHR10283:SF93 10 166 2.5E-259 T 21-04-2016 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 PANTHER PTHR10283:SF93 195 511 2.5E-259 T 21-04-2016 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 PANTHER PTHR10283 10 166 2.5E-259 T 21-04-2016 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 PANTHER PTHR10283 195 511 2.5E-259 T 21-04-2016 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 4 512 1.9E-262 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 342.848 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APL_RS01665 03a2d8e4273c268e0c6ba718942505e0 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 3 511 8.8E-263 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 Gene3D G3DSA:1.10.3720.10 17 267 9.3E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 265 1.1E-109 T 21-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 269 7.4E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 3 261 1.2E-88 T 21-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 PANTHER PTHR30406:SF6 1 270 5.3E-132 T 21-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 SUPERFAMILY SSF161098 12 261 2.62E-55 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09835 5b680e7a0f73fc1002750367b3acbb22 270 PANTHER PTHR30406 1 270 5.3E-132 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 PANTHER PTHR30290 158 550 8.0E-163 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 PANTHER PTHR30290 1 134 8.0E-163 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 PANTHER PTHR30290:SF28 158 550 8.0E-163 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 PANTHER PTHR30290:SF28 1 134 8.0E-163 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 PIRSF PIRSF002741 12 563 3.7E-78 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 477 2.3E-67 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 Gene3D G3DSA:3.10.105.10 321 530 5.8E-33 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 Gene3D G3DSA:3.90.76.10 49 249 6.5E-39 T 21-04-2016 APL_RS04170 50f41dedf96077086e00cfebbe1cb0e0 565 SUPERFAMILY SSF53850 39 558 4.34E-99 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 SUPERFAMILY SSF82057 39 107 4.44E-23 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 Pfam PF08274 PhnA Zinc-Ribbon 3 30 2.9E-13 T 21-04-2016 IPR013987 PhnA protein, N-terminal APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 PANTHER PTHR30305 1 107 1.3E-64 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 SUPERFAMILY SSF57783 1 37 1.36E-13 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 Gene3D G3DSA:2.20.25.10 1 40 5.6E-18 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 Gene3D G3DSA:2.30.30.40 43 107 3.1E-29 T 21-04-2016 APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 Pfam PF03831 PhnA domain 45 107 5.2E-25 T 21-04-2016 IPR013988 PhnA protein, C-terminal APL_RS07290 eddb8e580ab6ca9da37854a43171377e 107 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 107 1.5E-54 T 21-04-2016 IPR004624 PhnA protein APL_RS08335 d08242f998e4a620e1b55ef104ed6eaf 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 5.0E-28 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APL_RS08335 d08242f998e4a620e1b55ef104ed6eaf 136 PANTHER PTHR30558 10 136 8.6E-29 T 21-04-2016 APL_RS10835 7ae14b1691ef6204ae8268c61bae3462 330 PANTHER PTHR30574:SF1 1 316 5.9E-41 T 21-04-2016 APL_RS10835 7ae14b1691ef6204ae8268c61bae3462 330 PANTHER PTHR30574 1 316 5.9E-41 T 21-04-2016 APL_RS10835 7ae14b1691ef6204ae8268c61bae3462 330 Pfam PF04143 Sulphur transport 18 316 2.2E-85 T 21-04-2016 IPR007272 Sulphur transport domain APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.218 T 21-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.9E-27 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 21-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 SUPERFAMILY SSF57716 2 101 2.99E-38 T 21-04-2016 APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 PANTHER PTHR19836 2 101 2.7E-62 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09425 1a71bfb0a63148a717c646961018af7b 101 Gene3D G3DSA:4.10.830.10 41 101 1.9E-31 T 21-04-2016 APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 Gene3D G3DSA:3.30.1320.10 1 78 8.9E-32 T 21-04-2016 IPR023803 Ribosomal protein S16 domain APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 21-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.402 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 SUPERFAMILY SSF54565 1 76 5.1E-28 T 21-04-2016 IPR023803 Ribosomal protein S16 domain APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 PANTHER PTHR12919 1 78 3.0E-37 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 Pfam PF00886 Ribosomal protein S16 8 68 4.1E-23 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09495 a05c3ef4f39d2a574be733db85b63ca8 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.1E-29 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS07590 bd4a2b722db997c1bac3d7e46242199c 335 Gene3D G3DSA:3.30.565.40 116 224 3.1E-9 T 21-04-2016 IPR025303 Domain of unknown function DUF4163 APL_RS07590 bd4a2b722db997c1bac3d7e46242199c 335 Gene3D G3DSA:3.90.640.20 229 320 4.4E-17 T 21-04-2016 IPR021729 Domain of unknown function DUF3298 APL_RS07590 bd4a2b722db997c1bac3d7e46242199c 335 Pfam PF11738 Protein of unknown function (DUF3298) 228 304 5.3E-10 T 21-04-2016 IPR021729 Domain of unknown function DUF3298 APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 Gene3D G3DSA:1.10.150.240 15 91 9.8E-18 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 Gene3D G3DSA:3.40.50.1000 92 223 2.6E-41 T 21-04-2016 IPR023214 HAD-like domain APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 1.3E-62 T 21-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 PANTHER PTHR12725:SF57 1 226 2.2E-43 T 21-04-2016 APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 PANTHER PTHR12725 1 226 2.2E-43 T 21-04-2016 APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 SUPERFAMILY SSF56784 2 223 5.41E-44 T 21-04-2016 IPR023214 HAD-like domain APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 2.1E-23 T 21-04-2016 IPR023214 HAD-like domain APL_RS00685 e18f31dd44a1c37fe7e4def36258cea7 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 2.4E-14 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 Gene3D G3DSA:2.60.40.200 40 190 1.2E-47 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 81 91 - T 21-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 178 189 - T 21-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 PANTHER PTHR10003:SF40 54 189 1.1E-40 T 21-04-2016 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 SUPERFAMILY SSF49329 39 190 9.29E-50 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 PANTHER PTHR10003 54 189 1.1E-40 T 21-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 APL_RS00020 166c482bb59af6d871305d7bf287a518 190 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 50 189 2.7E-31 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APL_RS01105 fb1dd856173158a35450321a018a207d 331 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 6 329 4.0E-130 T 21-04-2016 IPR013399 CRISPR-associated protein Csy3 APL_RS01105 fb1dd856173158a35450321a018a207d 331 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 6 326 9.9E-139 T 21-04-2016 IPR013399 CRISPR-associated protein Csy3 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 SUPERFAMILY SSF55681 93 328 1.77E-80 T 21-04-2016 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 SUPERFAMILY SSF46589 21 100 1.15E-19 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 Pfam PF01409 tRNA synthetases class II core domain (F) 93 327 3.3E-103 T 21-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 327 47.957 T 21-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 22 88 8.4E-26 T 21-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 328 8.4E-116 T 21-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 Gene3D G3DSA:3.30.930.10 20 328 2.6E-127 T 21-04-2016 APL_RS03190 0f9fd99191cfa8703d780257e817cccf 328 PANTHER PTHR11538 93 328 1.8E-112 T 21-04-2016 APL_RS03915 267995a7cefca61c0bc43f4ab6428ca9 261 PANTHER PTHR10992:SF768 17 260 6.3E-75 T 21-04-2016 APL_RS03915 267995a7cefca61c0bc43f4ab6428ca9 261 Pfam PF12697 Alpha/beta hydrolase family 24 253 5.9E-18 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APL_RS03915 267995a7cefca61c0bc43f4ab6428ca9 261 PANTHER PTHR10992 17 260 6.3E-75 T 21-04-2016 APL_RS03915 267995a7cefca61c0bc43f4ab6428ca9 261 Gene3D G3DSA:3.40.50.1820 15 258 1.3E-45 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS03915 267995a7cefca61c0bc43f4ab6428ca9 261 SUPERFAMILY SSF53474 6 259 2.57E-45 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 SUPERFAMILY SSF46785 3 85 1.03E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 PANTHER PTHR30537:SF26 1 292 3.6E-111 T 21-04-2016 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 Gene3D G3DSA:3.40.190.10 179 257 1.9E-14 T 21-04-2016 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 SUPERFAMILY SSF53850 93 293 4.66E-36 T 21-04-2016 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 Gene3D G3DSA:1.10.10.10 1 87 3.4E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 Pfam PF03466 LysR substrate binding domain 93 289 1.4E-34 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 PANTHER PTHR30537 1 292 3.6E-111 T 21-04-2016 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 Gene3D G3DSA:3.40.190.10 96 178 8.7E-32 T 21-04-2016 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.2E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.3E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.3E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS00680 bb68f8a292a6e3e0cec06d8db6187337 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.3E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS07505 93368869cef55452d501882b9da4f9f6 330 PANTHER PTHR30036:SF2 5 330 2.4E-128 T 21-04-2016 APL_RS07505 93368869cef55452d501882b9da4f9f6 330 Gene3D G3DSA:3.40.50.2300 167 315 5.5E-38 T 21-04-2016 APL_RS07505 93368869cef55452d501882b9da4f9f6 330 Gene3D G3DSA:3.40.50.2300 27 166 6.7E-37 T 21-04-2016 APL_RS07505 93368869cef55452d501882b9da4f9f6 330 SUPERFAMILY SSF53822 26 329 1.74E-80 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS07505 93368869cef55452d501882b9da4f9f6 330 PANTHER PTHR30036 5 330 2.4E-128 T 21-04-2016 APL_RS07505 93368869cef55452d501882b9da4f9f6 330 Pfam PF13407 Periplasmic binding protein domain 28 298 7.9E-60 T 21-04-2016 IPR025997 Periplasmic binding protein APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 220 6.0E-74 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.738 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 Pfam PF14622 Ribonuclease-III-like 19 136 2.5E-35 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 Pfam PF00035 Double-stranded RNA binding motif 153 220 6.3E-16 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 PANTHER PTHR11207 2 220 1.2E-90 T 21-04-2016 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 SUPERFAMILY SSF54768 106 220 8.33E-27 T 21-04-2016 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 Gene3D G3DSA:3.30.160.20 150 220 1.8E-26 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 Gene3D G3DSA:1.10.1520.10 2 143 7.3E-48 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 SMART SM00358 153 221 1.0E-21 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 SMART SM00535 18 146 4.7E-53 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APL_RS02860 1c9f14b563841f237fa6abcb67482d73 223 SUPERFAMILY SSF69065 2 156 5.41E-50 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APL_RS03255 334af7057cef3f850cab287deed79852 230 SUPERFAMILY SSF53067 5 107 1.38E-30 T 21-04-2016 APL_RS03255 334af7057cef3f850cab287deed79852 230 PANTHER PTHR11735 1 154 4.6E-55 T 21-04-2016 APL_RS03255 334af7057cef3f850cab287deed79852 230 SUPERFAMILY SSF53067 111 216 7.12E-25 T 21-04-2016 APL_RS03255 334af7057cef3f850cab287deed79852 230 Pfam PF00814 Glycoprotease family 31 182 1.3E-38 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APL_RS03255 334af7057cef3f850cab287deed79852 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 218 2.2E-71 T 21-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APL_RS03255 334af7057cef3f850cab287deed79852 230 PANTHER PTHR11735:SF11 1 154 4.6E-55 T 21-04-2016 APL_RS03255 334af7057cef3f850cab287deed79852 230 Gene3D G3DSA:3.30.420.40 5 136 2.1E-45 T 21-04-2016 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 SMART SM00382 54 181 1.5E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.787 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.5E-150 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 SUPERFAMILY SSF46785 260 330 2.96E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Gene3D G3DSA:3.40.50.300 23 178 3.0E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 PANTHER PTHR13779 1 330 4.1E-189 T 21-04-2016 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 SUPERFAMILY SSF52540 23 254 1.05E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.2E-117 T 21-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Gene3D G3DSA:1.10.10.10 260 330 9.9E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 4.0E-37 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Gene3D G3DSA:1.10.8.60 186 258 4.4E-34 T 21-04-2016 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 330 2.6E-33 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APL_RS01470 b417699dff016cc38ad7df7182d670c3 334 PANTHER PTHR13779:SF25 1 330 4.1E-189 T 21-04-2016 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 Gene3D G3DSA:1.10.10.60 328 382 1.6E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 103 116 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 PANTHER PTHR32071 76 382 2.0E-163 T 21-04-2016 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 Gene3D G3DSA:1.10.8.60 247 318 4.3E-21 T 21-04-2016 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 PANTHER PTHR32071:SF3 76 382 2.0E-163 T 21-04-2016 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 SMART SM00382 99 238 2.6E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 SUPERFAMILY SSF52540 79 315 1.27E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 Pfam PF00158 Sigma-54 interaction domain 79 240 1.1E-51 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 Gene3D G3DSA:3.40.50.300 76 246 3.9E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 287 296 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 SUPERFAMILY SSF46689 328 381 5.26E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS04175 8c1370b6280752bd6b0214930126a38b 382 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 334 382 1.6E-28 T 21-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 APL_RS04475 978947e1e2bfccf969618068e13257da 531 Gene3D G3DSA:3.90.76.10 35 214 5.8E-49 T 21-04-2016 APL_RS04475 978947e1e2bfccf969618068e13257da 531 PANTHER PTHR30290:SF14 26 531 1.8E-182 T 21-04-2016 APL_RS04475 978947e1e2bfccf969618068e13257da 531 Gene3D G3DSA:3.10.105.10 286 500 2.6E-65 T 21-04-2016 APL_RS04475 978947e1e2bfccf969618068e13257da 531 PANTHER PTHR30290 26 531 1.8E-182 T 21-04-2016 APL_RS04475 978947e1e2bfccf969618068e13257da 531 SUPERFAMILY SSF53850 26 528 1.81E-151 T 21-04-2016 APL_RS04475 978947e1e2bfccf969618068e13257da 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 449 1.3E-101 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS04475 978947e1e2bfccf969618068e13257da 531 PIRSF PIRSF002741 19 531 4.4E-120 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 SUPERFAMILY SSF52540 5 223 9.73E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 Gene3D G3DSA:3.40.50.300 3 228 8.4E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 Gene3D G3DSA:3.40.50.300 255 490 1.8E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 SMART SM00382 31 218 6.5E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 SMART SM00382 281 476 0.69 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 PANTHER PTHR24220 8 381 5.7E-276 T 21-04-2016 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 PANTHER PTHR24220:SF303 8 381 5.7E-276 T 21-04-2016 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 Pfam PF00005 ABC transporter 273 427 4.5E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 Pfam PF00005 ABC transporter 22 171 3.7E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07500 301de5cacc70e276a143b83b1f5a2489 499 SUPERFAMILY SSF52540 246 479 2.01E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 PANTHER PTHR38594:SF1 1 134 3.0E-36 T 21-04-2016 APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 PANTHER PTHR38594 1 134 3.0E-36 T 21-04-2016 APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 Gene3D G3DSA:3.40.50.510 1 131 7.8E-48 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 SUPERFAMILY SSF53062 1 127 9.42E-35 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 3.7E-43 T 21-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain APL_RS00430 ae8b2fcf2aed434f892dc9121b388501 135 Pfam PF03610 PTS system fructose IIA component 4 119 9.6E-28 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APL_RS08980 f6675188a762ee458b0060558b2c3de5 222 Gene3D G3DSA:1.10.3720.10 11 221 5.1E-40 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08980 f6675188a762ee458b0060558b2c3de5 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 6.4E-17 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APL_RS08980 f6675188a762ee458b0060558b2c3de5 222 PANTHER PTHR30614 1 221 5.0E-48 T 21-04-2016 APL_RS08980 f6675188a762ee458b0060558b2c3de5 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 216 3.9E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08980 f6675188a762ee458b0060558b2c3de5 222 SUPERFAMILY SSF161098 15 212 7.63E-39 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 SUPERFAMILY SSF48695 47 198 3.57E-25 T 21-04-2016 IPR011031 Multihaem cytochrome APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 PANTHER PTHR35038 43 204 5.5E-26 T 21-04-2016 APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 97 148 6.4E-5 T 21-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 164 198 1.1E-4 T 21-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 Gene3D G3DSA:1.10.3820.10 19 202 1.4E-17 T 21-04-2016 APL_RS00530 69168eb72fbde5e9668cc225d5db5cbc 215 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 52 198 4.3E-56 T 21-04-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 UniPathway: UPA00045 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 103 327 1.9E-10 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 SUPERFAMILY SSF53756 36 336 3.61E-56 T 21-04-2016 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 Gene3D G3DSA:3.40.50.2000 36 178 1.5E-19 T 21-04-2016 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 PANTHER PTHR30160:SF1 35 325 4.3E-34 T 21-04-2016 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 PANTHER PTHR30160 35 325 4.3E-34 T 21-04-2016 APL_RS05130 d3e4905ec6e446571402bc83c7f4f3c9 346 Gene3D G3DSA:3.40.50.2000 198 325 5.2E-15 T 21-04-2016 APL_RS01220 40e69c3763e0e0c5a49486259937d2f1 105 Pfam PF10818 Protein of unknown function (DUF2547) 9 104 3.5E-33 T 21-04-2016 IPR020508 Protein of unknown function DUF2547 APL_RS01220 40e69c3763e0e0c5a49486259937d2f1 105 ProDom PD067723 PM1220 PRECURSOR HI0908 SIGNAL 12 103 0.002 T 21-04-2016 IPR020508 Protein of unknown function DUF2547 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 PIRSF PIRSF005096 1 322 4.9E-95 T 21-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 Pfam PF01263 Aldose 1-epimerase 3 319 1.9E-81 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 Gene3D G3DSA:2.70.98.10 2 321 1.2E-96 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 PANTHER PTHR10091 1 322 1.3E-99 T 21-04-2016 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 SUPERFAMILY SSF74650 3 320 3.58E-88 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APL_RS05215 8f614ac9b961b0b355e3df719e238551 322 PANTHER PTHR10091:SF0 1 322 1.3E-99 T 21-04-2016 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 409 36.116 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 PANTHER PTHR30578:SF1 3 410 1.1E-252 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 Pfam PF03116 NQR2, RnfD, RnfE family 41 402 8.7E-108 T 21-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 PIRSF PIRSF016055 1 410 2.5E-195 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 PANTHER PTHR30578 3 410 1.1E-252 T 21-04-2016 APL_RS00780 07c06f129a321e38cc89a89be7ff2433 410 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 405 5.3E-196 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Gene3D G3DSA:3.10.150.10 123 249 3.2E-37 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 2.4E-41 T 21-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 PIRSF PIRSF000804 1 367 1.3E-117 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 1.3E-38 T 21-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 4.5E-118 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 SMART SM00480 17 363 1.1E-149 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Gene3D G3DSA:3.10.150.10 250 367 2.2E-37 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.9E-38 T 21-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 SUPERFAMILY SSF55979 246 367 3.24E-37 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 Gene3D G3DSA:3.10.150.10 1 121 1.0E-31 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 SUPERFAMILY SSF55979 127 245 6.96E-29 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 SUPERFAMILY SSF55979 1 119 2.3E-27 T 21-04-2016 APL_RS00010 47364a82bd94d5d5a737d4ada667e7ef 367 PANTHER PTHR30478 2 367 4.2E-132 T 21-04-2016 APL_RS02300 0497e246087a414e5c4d59c0d26e4c64 531 PANTHER PTHR30003:SF4 1 531 1.7E-222 T 21-04-2016 APL_RS02300 0497e246087a414e5c4d59c0d26e4c64 531 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 525 4.2E-152 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APL_RS02300 0497e246087a414e5c4d59c0d26e4c64 531 Pfam PF02652 L-lactate permease 4 522 2.4E-153 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APL_RS02300 0497e246087a414e5c4d59c0d26e4c64 531 PANTHER PTHR30003 1 531 1.7E-222 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APL_RS05535 4911f35c582b8ada4005171946bfaece 115 Gene3D G3DSA:2.40.50.200 7 114 3.2E-36 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05535 4911f35c582b8ada4005171946bfaece 115 PANTHER PTHR36571:SF1 15 115 3.0E-29 T 21-04-2016 APL_RS05535 4911f35c582b8ada4005171946bfaece 115 PANTHER PTHR36571 15 115 3.0E-29 T 21-04-2016 APL_RS05535 4911f35c582b8ada4005171946bfaece 115 Pfam PF04076 Bacterial OB fold (BOF) protein 20 114 3.3E-30 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS05535 4911f35c582b8ada4005171946bfaece 115 SUPERFAMILY SSF101756 10 114 1.83E-28 T 21-04-2016 IPR005220 Bacterial OB-fold APL_RS02160 499615d22fc390d8047b764dacaba301 345 Gene3D G3DSA:3.40.50.2000 2 142 3.4E-34 T 21-04-2016 APL_RS02160 499615d22fc390d8047b764dacaba301 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 318 5.9E-17 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APL_RS02160 499615d22fc390d8047b764dacaba301 345 PANTHER PTHR30160 1 328 2.3E-158 T 21-04-2016 APL_RS02160 499615d22fc390d8047b764dacaba301 345 Gene3D G3DSA:3.40.50.2000 168 308 2.0E-19 T 21-04-2016 APL_RS02160 499615d22fc390d8047b764dacaba301 345 SUPERFAMILY SSF53756 2 340 7.38E-67 T 21-04-2016 APL_RS02160 499615d22fc390d8047b764dacaba301 345 PANTHER PTHR30160:SF10 1 328 2.3E-158 T 21-04-2016 APL_RS10355 09cbc8f5516e07eb3ab44f34ba147764 177 PANTHER PTHR32552 1 162 5.2E-16 T 21-04-2016 APL_RS10355 09cbc8f5516e07eb3ab44f34ba147764 177 SUPERFAMILY SSF56935 2 169 1.15E-9 T 21-04-2016 APL_RS10355 09cbc8f5516e07eb3ab44f34ba147764 177 PANTHER PTHR32552:SF18 1 162 5.2E-16 T 21-04-2016 APL_RS10355 09cbc8f5516e07eb3ab44f34ba147764 177 Gene3D G3DSA:2.40.170.20 14 177 9.3E-13 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS06775 3d7f7136f244155841998a12a61be635 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 1.8E-99 T 21-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APL_RS06775 3d7f7136f244155841998a12a61be635 258 PANTHER PTHR30188 1 258 3.6E-118 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APL_RS06775 3d7f7136f244155841998a12a61be635 258 PANTHER PTHR30188:SF4 1 258 3.6E-118 T 21-04-2016 APL_RS06775 3d7f7136f244155841998a12a61be635 258 Pfam PF02405 Permease MlaE 44 254 7.0E-74 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 SUPERFAMILY SSF50715 3 95 2.62E-31 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 Pfam PF01386 Ribosomal L25p family 6 92 2.6E-25 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 PANTHER PTHR33284 1 95 2.8E-38 T 21-04-2016 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 27.675 T 21-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 Gene3D G3DSA:2.40.240.10 3 95 1.3E-34 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APL_RS02505 faf3e769bb423e8dd7dcc21437b27b81 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 95 1.0E-44 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 Pfam PF07719 Tetratricopeptide repeat 111 143 5.0E-6 T 21-04-2016 IPR013105 Tetratricopeptide repeat 2 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 Gene3D G3DSA:1.25.40.10 61 278 4.9E-26 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 PIRSF PIRSF004654 5 306 7.1E-106 T 21-04-2016 IPR023605 Lipoprotein NlpI APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 PANTHER PTHR23083 72 290 3.1E-16 T 21-04-2016 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 PANTHER PTHR23083 3 10 3.1E-16 T 21-04-2016 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 SMART SM00028 110 143 1.4E-5 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 SMART SM00028 144 177 140.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 SMART SM00028 76 109 0.31 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 SMART SM00028 249 282 27.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APL_RS03025 8e148cc99a8b9a49ce4c209e97121fe3 313 SUPERFAMILY SSF48452 50 296 1.27E-60 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 SUPERFAMILY SSF143548 16 161 6.02E-41 T 21-04-2016 IPR029009 Allosteric substrate binding domain APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 455 1.3E-218 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 Pfam PF03315 Serine dehydratase beta chain 3 159 2.7E-52 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 Pfam PF03313 Serine dehydratase alpha chain 187 452 1.3E-98 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 PANTHER PTHR30182:SF5 1 456 1.6E-282 T 21-04-2016 APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 PANTHER PTHR30182 1 456 1.6E-282 T 21-04-2016 APL_RS04485 b893e385e54a9f3216749f8ee41debae 459 Gene3D G3DSA:3.30.1330.90 10 161 2.1E-48 T 21-04-2016 IPR029009 Allosteric substrate binding domain APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 139 5.8E-35 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 Gene3D G3DSA:3.30.479.10 1 139 2.0E-38 T 21-04-2016 APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 PANTHER PTHR12589 1 140 3.9E-43 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 PIRSF PIRSF006113 1 140 4.1E-24 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 PANTHER PTHR12589:SF5 1 140 3.9E-43 T 21-04-2016 APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 117 1.3E-30 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APL_RS05725 d25f5060586ad4ef5ba6497870a92954 140 SUPERFAMILY SSF55620 1 139 3.95E-36 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 21-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 545 554 - T 21-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993:SF26 353 562 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993:SF26 5 118 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993:SF26 188 257 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993 353 562 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993 5 118 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 PANTHER PTHR11993 188 257 6.7E-180 T 21-04-2016 APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 Gene3D G3DSA:1.10.645.10 4 554 4.7E-207 T 21-04-2016 IPR029014 NiFe hydrogenase-like APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 SUPERFAMILY SSF56762 3 554 1.31E-166 T 21-04-2016 IPR029014 NiFe hydrogenase-like APL_RS06995 afd3b6f2d6cc80a4080dd4f16bc341ea 569 Pfam PF00374 Nickel-dependent hydrogenase 41 554 9.7E-206 T 21-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 SUPERFAMILY SSF54285 3 78 5.23E-23 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 23.124 T 21-04-2016 IPR005346 RnfH protein APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 Pfam PF03658 RnfH family Ubiquitin 4 86 9.2E-31 T 21-04-2016 IPR005346 RnfH protein APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 Gene3D G3DSA:3.10.20.280 2 88 1.7E-33 T 21-04-2016 IPR005346 RnfH protein APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 PANTHER PTHR37483:SF1 1 92 8.7E-35 T 21-04-2016 APL_RS01340 3e9913bb27f80d6d5590978c51d40a36 95 PANTHER PTHR37483 1 92 8.7E-35 T 21-04-2016 APL_RS02930 c85ee550fd1e0003afdfda6938955879 142 PANTHER PTHR36506 3 135 3.6E-15 T 21-04-2016 APL_RS02930 c85ee550fd1e0003afdfda6938955879 142 Pfam PF01478 Type IV leader peptidase family 11 108 4.4E-13 T 21-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 369 4.9E-161 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 PANTHER PTHR30605:SF0 1 369 9.2E-160 T 21-04-2016 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 Gene3D G3DSA:3.30.420.40 5 196 2.0E-66 T 21-04-2016 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 PANTHER PTHR30605 1 369 9.2E-160 T 21-04-2016 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 369 39.972 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 SUPERFAMILY SSF53067 66 111 1.4E-27 T 21-04-2016 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 SUPERFAMILY SSF53067 143 343 1.4E-27 T 21-04-2016 APL_RS08110 21a8fe3df1b370c2a5d241563effc6e6 369 SUPERFAMILY SSF53067 5 39 1.4E-27 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 21-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PANTHER PTHR11469:SF11 1 546 0.0 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Gene3D G3DSA:3.40.50.10490 4 100 6.2E-172 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Gene3D G3DSA:3.40.50.10490 145 182 6.2E-172 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Gene3D G3DSA:3.40.50.10490 261 499 6.2E-172 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 522 42.586 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Gene3D G3DSA:1.10.1390.10 500 546 1.7E-22 T 21-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PANTHER PTHR11469 1 546 0.0 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 Pfam PF00342 Phosphoglucose isomerase 50 539 4.1E-260 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 21-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 SUPERFAMILY SSF53697 5 545 9.39E-223 T 21-04-2016 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS05925 cce1d7bbe5be60c9bc8c77a4b979c63b 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 3.0E-56 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 SUPERFAMILY SSF69754 1 100 2.09E-28 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.2E-17 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 PANTHER PTHR33231:SF3 1 103 8.1E-49 T 21-04-2016 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 Gene3D G3DSA:3.30.160.100 3 91 4.3E-26 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 PANTHER PTHR33231 1 103 8.1E-49 T 21-04-2016 APL_RS04710 779c4e0e44919141eca78b73e00b3ec0 104 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-28 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-174 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Pfam PF08442 ATP-grasp domain 2 202 1.0E-77 T 21-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Gene3D G3DSA:3.30.470.20 95 239 4.5E-57 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 21-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 SUPERFAMILY SSF56059 1 238 3.53E-77 T 21-04-2016 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 PIRSF PIRSF001554 1 388 1.2E-150 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Pfam PF00549 CoA-ligase 262 381 3.8E-25 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 PANTHER PTHR11815 1 388 1.4E-225 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Gene3D G3DSA:3.30.1490.20 21 94 3.5E-30 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.493 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 PANTHER PTHR11815:SF1 1 388 1.4E-225 T 21-04-2016 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 Gene3D G3DSA:3.40.50.261 241 383 2.5E-65 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS02325 1f0a327ee9ee0c7029f894c0c33ad7c3 388 SUPERFAMILY SSF52210 241 384 1.05E-52 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APL_RS05630 e0a54e25011479045f713dbfc9a30160 430 PANTHER PTHR11119 1 430 5.1E-106 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS05630 e0a54e25011479045f713dbfc9a30160 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 342 362 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APL_RS05630 e0a54e25011479045f713dbfc9a30160 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 12 424 9.6E-112 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APL_RS05630 e0a54e25011479045f713dbfc9a30160 430 TIGRFAM TIGR03173 pbuX: xanthine permease 21 426 9.1E-141 T 21-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 APL_RS05630 e0a54e25011479045f713dbfc9a30160 430 Pfam PF00860 Permease family 17 394 5.9E-90 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 PANTHER PTHR20941:SF1 10 281 1.5E-123 T 21-04-2016 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 Pfam PF00809 Pterin binding enzyme 23 262 2.8E-85 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 PANTHER PTHR20941 10 281 1.5E-123 T 21-04-2016 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 SUPERFAMILY SSF51717 11 278 1.44E-102 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 Gene3D G3DSA:3.20.20.20 17 279 3.3E-107 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 APL_RS09980 82928abdc0e6dbaa1bb16c49b902ae0e 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 276 2.8E-102 T 21-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Gene3D G3DSA:2.40.10.170 2 72 1.9E-27 T 21-04-2016 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 PANTHER PTHR15184 1 457 0.0 T 21-04-2016 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 2.1E-258 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Gene3D G3DSA:1.10.1140.10 342 457 6.5E-57 T 21-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 4.6E-20 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 SMART SM00382 139 324 0.0021 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 SUPERFAMILY SSF52540 74 345 6.19E-91 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 PANTHER PTHR15184:SF44 1 457 0.0 T 21-04-2016 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 339 5.7E-63 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 SUPERFAMILY SSF50615 1 72 2.46E-24 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Gene3D G3DSA:3.40.50.300 73 340 7.6E-109 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 SUPERFAMILY SSF47917 342 456 3.66E-54 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 457 56.849 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS08750 6d43c72cc2456bc038eac8045c870cbb 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 330 339 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 PIRSF PIRSF006118 1 167 1.3E-61 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 PANTHER PTHR21485 6 161 5.0E-39 T 21-04-2016 APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 SUPERFAMILY SSF56784 4 161 1.84E-40 T 21-04-2016 IPR023214 HAD-like domain APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 Gene3D G3DSA:3.40.50.1000 3 159 3.7E-36 T 21-04-2016 IPR023214 HAD-like domain APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 120 1.2E-15 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 6 157 1.5E-42 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APL_RS00255 5461062c6f172ef398d9a22ab5eb3f5b 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 80 140 2.0E-10 T 21-04-2016 IPR023214 HAD-like domain APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 PANTHER PTHR11649 1 474 5.8E-157 T 21-04-2016 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 SUPERFAMILY SSF52540 4 164 9.12E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 SUPERFAMILY SSF52540 191 479 1.03E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 394 472 2.9E-25 T 21-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 SMART SM00382 216 363 0.43 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 SMART SM00382 1 141 1.4 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 7.9E-21 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 383 3.7E-25 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Pfam PF01926 50S ribosome-binding GTPase 219 337 1.6E-24 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.0E-27 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 PIRSF PIRSF006485 1 481 5.0E-185 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 PANTHER PTHR11649:SF5 1 474 5.8E-157 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Gene3D G3DSA:3.40.50.300 214 398 3.9E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Gene3D G3DSA:3.40.50.300 3 165 6.4E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Hamap MF_00195 GTPase Der [der]. 2 476 38.574 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 Gene3D G3DSA:3.30.300.20 399 474 8.3E-22 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta APL_RS02070 8968ab5334d71187723346b52a46ec3d 506 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 473 2.2E-176 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 SUPERFAMILY SSF158442 15 163 2.75E-43 T 21-04-2016 APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 PANTHER PTHR36570 1 178 8.6E-69 T 21-04-2016 APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 Pfam PF02600 Disulfide bond formation protein DsbB 12 161 4.6E-44 T 21-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 Gene3D G3DSA:1.20.1550.10 1 172 2.2E-60 T 21-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 PANTHER PTHR36570:SF2 1 178 8.6E-69 T 21-04-2016 APL_RS01660 c2ce49ddacdcad380ece3b3cd1fcbec6 179 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 169 22.314 T 21-04-2016 IPR022920 Disulphide bond formation protein DsbB APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 PANTHER PTHR11731:SF123 13 123 3.3E-99 T 21-04-2016 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 PANTHER PTHR11731:SF123 162 422 3.3E-99 T 21-04-2016 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Gene3D G3DSA:2.130.10.10 154 422 3.3E-67 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Pfam PF07676 WD40-like Beta Propeller Repeat 203 221 0.0078 T 21-04-2016 IPR011659 WD40-like Beta Propeller APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Pfam PF07676 WD40-like Beta Propeller Repeat 363 390 1.5E-4 T 21-04-2016 IPR011659 WD40-like Beta Propeller APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Pfam PF07676 WD40-like Beta Propeller Repeat 282 316 1.3E-14 T 21-04-2016 IPR011659 WD40-like Beta Propeller APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Pfam PF07676 WD40-like Beta Propeller Repeat 244 272 2.9E-11 T 21-04-2016 IPR011659 WD40-like Beta Propeller APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 SUPERFAMILY SSF52964 34 163 5.75E-35 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 23 421 1.1E-138 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Hamap MF_00671 Protein TolB [tolB]. 8 420 31.261 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 PANTHER PTHR11731 13 123 3.3E-99 T 21-04-2016 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 PANTHER PTHR11731 162 422 3.3E-99 T 21-04-2016 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 SUPERFAMILY SSF69304 159 422 4.84E-48 T 21-04-2016 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Pfam PF04052 TolB amino-terminal domain 29 126 8.8E-29 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APL_RS01560 022e01c60005dfb49a0d07fdde0a1b55 426 Gene3D G3DSA:3.40.50.10070 28 153 6.1E-44 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 SUPERFAMILY SSF51230 78 140 5.5E-20 T 21-04-2016 IPR011053 Single hybrid motif APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 PANTHER PTHR23151 1 140 3.7E-41 T 21-04-2016 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 9.5E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 9.5E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 9.5E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 Gene3D G3DSA:2.40.50.100 77 140 2.9E-25 T 21-04-2016 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 140 6.4E-56 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 Pfam PF00364 Biotin-requiring enzyme 80 140 4.0E-19 T 21-04-2016 IPR000089 Biotin/lipoyl attachment APL_RS09920 cc4026999d5b07119eefc10bd1e94342 140 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 21-04-2016 IPR001882 Biotin-binding site APL_RS01255 efec17d1aa0f253be1b9a2ec8d68b044 569 Pfam PF01298 Transferrin binding protein-like solute binding protein 25 565 7.3E-133 T 21-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 APL_RS01255 efec17d1aa0f253be1b9a2ec8d68b044 569 SUPERFAMILY SSF56925 241 341 8.63E-31 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS01255 efec17d1aa0f253be1b9a2ec8d68b044 569 SUPERFAMILY SSF56925 161 205 8.63E-31 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS01255 efec17d1aa0f253be1b9a2ec8d68b044 569 SUPERFAMILY SSF56925 400 564 8.63E-28 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 PANTHER PTHR11819:SF148 4 494 1.1E-179 T 21-04-2016 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 423 443 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 PANTHER PTHR11819 4 494 1.1E-179 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 441 7.1E-123 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 498 1.4E-205 T 21-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 APL_RS00560 5eb390e44cc6810a13b4cd3e62659723 504 Pfam PF00474 Sodium:solute symporter family 35 441 5.8E-136 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 Gene3D G3DSA:1.10.10.60 62 155 2.2E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 SUPERFAMILY SSF46689 57 161 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 SUPERFAMILY SSF46689 1 52 1.18E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 Pfam PF13518 Helix-turn-helix domain 65 118 8.6E-12 T 21-04-2016 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 Pfam PF13518 Helix-turn-helix domain 8 53 6.4E-6 T 21-04-2016 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 PANTHER PTHR33795:SF1 1 169 3.4E-51 T 21-04-2016 APL_RS07910 89f918692bb60128a9e3897e0f0b962f 169 PANTHER PTHR33795 1 169 3.4E-51 T 21-04-2016 APL_RS01490 d4069f4723e931498d0a85cc33cdf3d8 106 Pfam PF02498 BRO family, N-terminal domain 11 106 1.1E-10 T 21-04-2016 IPR003497 BRO N-terminal domain APL_RS01490 d4069f4723e931498d0a85cc33cdf3d8 106 SMART SM01040 11 105 8.1E-14 T 21-04-2016 IPR003497 BRO N-terminal domain APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 58 1.1E-12 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 SMART SM00354 8 81 7.6E-24 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 Gene3D G3DSA:3.40.50.2300 64 172 3.1E-30 T 21-04-2016 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 SUPERFAMILY SSF47413 10 65 5.12E-14 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 Gene3D G3DSA:3.40.50.2300 173 338 4.9E-36 T 21-04-2016 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 PANTHER PTHR30146 8 317 3.7E-74 T 21-04-2016 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 Gene3D G3DSA:1.10.260.40 10 63 5.6E-21 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 SUPERFAMILY SSF53822 68 327 1.76E-43 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 10 339 5.6E-128 T 21-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 Pfam PF13407 Periplasmic binding protein domain 72 271 3.3E-8 T 21-04-2016 IPR025997 Periplasmic binding protein APL_RS10765 503cd8786e7ba417f387cd9bb46580b6 339 PANTHER PTHR30146:SF25 8 317 3.7E-74 T 21-04-2016 APL_RS02435 af6df1d5a536c39f13018e65652534e2 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 8.3E-16 T 21-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APL_RS02435 af6df1d5a536c39f13018e65652534e2 97 SUPERFAMILY SSF143011 1 88 2.49E-9 T 21-04-2016 APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR01032 Gene IV protein signature 395 417 3.7E-6 T 21-04-2016 APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR01032 Gene IV protein signature 236 259 3.7E-6 T 21-04-2016 APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR01032 Gene IV protein signature 342 370 3.7E-6 T 21-04-2016 APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 379 397 1.4E-13 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 1.4E-13 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 193 203 1.4E-13 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS02920 10bf097053557e0707c206bae395a3b9 462 Pfam PF13629 Pilus formation protein N terminal region 27 97 3.6E-16 T 21-04-2016 IPR032789 Pilus formation protein, N-terminal APL_RS02920 10bf097053557e0707c206bae395a3b9 462 Pfam PF00263 Bacterial type II and III secretion system protein 256 414 1.8E-37 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 APL_RS02920 10bf097053557e0707c206bae395a3b9 462 PANTHER PTHR30332 193 424 7.4E-45 T 21-04-2016 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 SMART SM00100 29 150 2.4E-20 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 Gene3D G3DSA:2.60.120.10 17 168 5.8E-38 T 21-04-2016 IPR014710 RmlC-like jelly roll fold APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 208 223 7.9E-13 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 208 7.9E-13 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 SMART SM00419 186 234 4.9E-16 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 SUPERFAMILY SSF46785 164 244 7.31E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 Gene3D G3DSA:1.10.10.10 169 243 3.3E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 ProSitePatterns PS00042 Crp-type HTH domain signature. 194 217 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 PANTHER PTHR24567:SF28 14 252 1.2E-116 T 21-04-2016 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 PANTHER PTHR24567 14 252 1.2E-116 T 21-04-2016 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 Pfam PF13545 Crp-like helix-turn-helix domain 167 240 4.3E-17 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 SUPERFAMILY SSF51206 22 161 4.98E-31 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like APL_RS03430 9805d3edfbf4d701ec3dc80804b47f1a 255 Pfam PF00027 Cyclic nucleotide-binding domain 50 131 3.0E-15 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain APL_RS08900 6cbf32a00cd8429fa1ec36a47e595890 277 PANTHER PTHR38095 2 277 2.6E-131 T 21-04-2016 APL_RS08900 6cbf32a00cd8429fa1ec36a47e595890 277 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 269 4.0E-91 T 21-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APL_RS08900 6cbf32a00cd8429fa1ec36a47e595890 277 PANTHER PTHR38095:SF1 2 277 2.6E-131 T 21-04-2016 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 Pfam PF00293 NUDIX domain 82 184 9.0E-10 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 PANTHER PTHR22769 18 199 1.8E-33 T 21-04-2016 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 PANTHER PTHR22769:SF32 18 199 1.8E-33 T 21-04-2016 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 SUPERFAMILY SSF55811 51 207 9.07E-29 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 Gene3D G3DSA:3.90.79.10 62 199 2.1E-23 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS05810 9dd47ded037f32e182e5cc856d69edd4 209 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 9 63 1.6E-26 T 21-04-2016 APL_RS05440 8e36aab20a59e0633f85b5802f847a63 302 Pfam PF03956 Membrane protein of unknown function (DUF340) 114 297 1.8E-51 T 21-04-2016 IPR005642 Lysine exporter LysO APL_RS05440 8e36aab20a59e0633f85b5802f847a63 302 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 297 1.0E-62 T 21-04-2016 IPR005642 Lysine exporter LysO APL_RS05440 8e36aab20a59e0633f85b5802f847a63 302 PANTHER PTHR35804:SF1 2 302 5.7E-67 T 21-04-2016 APL_RS05440 8e36aab20a59e0633f85b5802f847a63 302 PANTHER PTHR35804 2 302 5.7E-67 T 21-04-2016 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 350 54.302 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 PANTHER PTHR11751:SF398 5 349 1.5E-98 T 21-04-2016 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 Gene3D G3DSA:3.40.640.10 48 250 4.6E-69 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 Gene3D G3DSA:3.90.1150.10 251 349 1.1E-22 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 Pfam PF00155 Aminotransferase class I and II 44 347 1.0E-58 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 2.3E-123 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 SUPERFAMILY SSF53383 6 350 1.88E-82 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS10705 b14da89ea367e0b6804c6a6129a67ebc 350 PANTHER PTHR11751 5 349 1.5E-98 T 21-04-2016 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 SMART SM00853 460 595 1.1E-7 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 PANTHER PTHR10073 602 614 1.6E-148 T 21-04-2016 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 PANTHER PTHR10073 6 423 1.6E-148 T 21-04-2016 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Gene3D G3DSA:3.30.230.10 222 335 3.3E-37 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 4 622 24.677 T 21-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 SUPERFAMILY SSF55874 6 204 7.07E-55 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 SUPERFAMILY SSF54211 193 336 3.03E-38 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Pfam PF08676 MutL C terminal dimerisation domain 461 566 9.9E-15 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 SMART SM01340 217 336 9.9E-58 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 123 4.2E-12 T 21-04-2016 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 SUPERFAMILY SSF118116 457 602 3.01E-20 T 21-04-2016 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 316 1.7E-105 T 21-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 335 4.9E-39 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 - T 21-04-2016 IPR014762 DNA mismatch repair, conserved site APL_RS10375 38e8f4c42b0f6301e8619a9d61959401 622 Gene3D G3DSA:3.30.565.10 6 207 6.9E-78 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APL_RS05320 bea6e8c9502daa2c0fc75d3c4a760a8c 214 PANTHER PTHR40078:SF1 1 211 1.9E-41 T 21-04-2016 APL_RS05320 bea6e8c9502daa2c0fc75d3c4a760a8c 214 PANTHER PTHR40078 1 211 1.9E-41 T 21-04-2016 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 PANTHER PTHR21091:SF2 1 351 5.8E-159 T 21-04-2016 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 Gene3D G3DSA:3.20.20.210 2 353 9.1E-158 T 21-04-2016 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 8.1E-142 T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 PANTHER PTHR21091 1 351 5.8E-159 T 21-04-2016 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 SUPERFAMILY SSF51726 2 353 2.62E-122 T 21-04-2016 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 2.4E-137 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APL_RS00585 5caa7b1d685f940bd2b9caa6b1f52b94 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.608 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 PANTHER PTHR38339 19 364 9.4E-86 T 21-04-2016 APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 Pfam PF01841 Transglutaminase-like superfamily 152 278 4.1E-25 T 21-04-2016 IPR002931 Transglutaminase-like APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 SUPERFAMILY SSF54001 123 231 1.54E-23 T 21-04-2016 APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 SUPERFAMILY SSF54001 260 280 1.54E-23 T 21-04-2016 APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 SMART SM00460 199 281 5.5E-19 T 21-04-2016 IPR002931 Transglutaminase-like APL_RS09880 aa9620f2fe99c4b2723931cf59c1d89f 366 Gene3D G3DSA:3.90.260.10 200 282 6.2E-7 T 21-04-2016 IPR002931 Transglutaminase-like APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 297 58.169 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Pfam PF00589 Phage integrase family 111 283 6.6E-55 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 297 30.471 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Gene3D G3DSA:1.10.443.10 111 287 6.5E-57 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 296 2.7E-113 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 SUPERFAMILY SSF56349 7 286 3.83E-55 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Gene3D G3DSA:1.10.150.130 5 97 7.8E-25 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 PANTHER PTHR30349 4 296 1.0E-115 T 21-04-2016 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 PANTHER PTHR30349:SF5 4 296 1.0E-115 T 21-04-2016 APL_RS08145 62e29ded88c2098e7787bf200e5ee0d0 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 3.4E-21 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR01032 Gene IV protein signature 236 259 4.2E-7 T 21-04-2016 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR01032 Gene IV protein signature 342 370 4.2E-7 T 21-04-2016 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR01032 Gene IV protein signature 395 417 4.2E-7 T 21-04-2016 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR01032 Gene IV protein signature 22 43 4.2E-7 T 21-04-2016 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 5.5E-17 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR00811 Bacterial general secretion pathway protein D signature 402 416 5.5E-17 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 5.5E-17 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PRINTS PR00811 Bacterial general secretion pathway protein D signature 379 397 5.5E-17 T 21-04-2016 IPR001775 GspD/PilQ family APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 Pfam PF03958 Bacterial type II/III secretion system short domain 112 177 1.3E-11 T 21-04-2016 IPR005644 NolW-like APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 19 415 1.4E-110 T 21-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 PANTHER PTHR30604 1 423 5.9E-89 T 21-04-2016 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 Pfam PF00263 Bacterial type II and III secretion system protein 256 415 3.7E-44 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 APL_RS01025 ca4aee160221489ab24ca083bbec3e9d 432 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 360 393 - T 21-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 187 1.4E-49 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 PANTHER PTHR23407:SF1 1 189 1.0E-44 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 PANTHER PTHR23407 1 189 1.0E-44 T 21-04-2016 APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 Gene3D G3DSA:3.40.50.10420 9 188 9.4E-48 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 PIRSF PIRSF006806 4 190 5.0E-40 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 SUPERFAMILY SSF100950 8 188 2.37E-47 T 21-04-2016 APL_RS00570 c0617257fab8a7e9505d87a32c52386f 191 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 187 1.9E-37 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APL_RS08630 41407234bad3319407976c5c95a3d31b 621 SUPERFAMILY SSF116726 330 404 1.96E-13 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Pfam PF03600 Citrate transporter 439 619 1.2E-21 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Pfam PF03600 Citrate transporter 27 208 1.2E-31 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 SUPERFAMILY SSF116726 242 298 1.96E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Gene3D G3DSA:3.30.70.1450 242 319 2.4E-12 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Gene3D G3DSA:3.30.70.1450 332 406 2.2E-16 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Pfam PF02080 TrkA-C domain 335 398 1.5E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 Pfam PF02080 TrkA-C domain 242 299 3.1E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283:SF12 283 362 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283:SF12 16 234 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283:SF12 457 620 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283 283 362 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283 16 234 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 PANTHER PTHR10283 457 620 1.1E-173 T 21-04-2016 APL_RS08630 41407234bad3319407976c5c95a3d31b 621 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 569 585 - T 21-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 PANTHER PTHR33795 1 169 2.9E-52 T 21-04-2016 APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 Gene3D G3DSA:1.10.10.60 62 155 3.7E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 Pfam PF13518 Helix-turn-helix domain 65 118 3.6E-12 T 21-04-2016 APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 SUPERFAMILY SSF46689 57 161 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 SUPERFAMILY SSF46689 1 52 1.59E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS03215 58c9673c35f76c2619cc169029bbab0c 169 PANTHER PTHR33795:SF1 1 169 2.9E-52 T 21-04-2016 APL_RS01730 e65a3481e837e71bd19f6df828b31af1 170 Gene3D G3DSA:3.40.930.10 1 166 3.7E-43 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS01730 e65a3481e837e71bd19f6df828b31af1 170 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 159 1.6E-35 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APL_RS01730 e65a3481e837e71bd19f6df828b31af1 170 SUPERFAMILY SSF55804 1 159 4.19E-30 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APL_RS01730 e65a3481e837e71bd19f6df828b31af1 170 PANTHER PTHR30505:SF6 1 170 4.7E-48 T 21-04-2016 APL_RS01730 e65a3481e837e71bd19f6df828b31af1 170 PANTHER PTHR30505 1 170 4.7E-48 T 21-04-2016 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 PANTHER PTHR23417:SF14 19 249 2.3E-77 T 21-04-2016 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 Pfam PF02390 Putative methyltransferase 73 244 1.2E-59 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 34 249 30.025 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 SUPERFAMILY SSF53335 26 248 4.3E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 PANTHER PTHR23417 19 249 2.3E-77 T 21-04-2016 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 248 1.8E-71 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APL_RS07315 c8fa008563a6af35bc3cca7114cc501d 250 Gene3D G3DSA:3.40.50.150 72 203 1.5E-13 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Pfam PF01029 NusB family 5 126 1.0E-24 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 429 2.2E-71 T 21-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 432 8.6E-157 T 21-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 414 431 1.9E-29 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.9E-29 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 1.9E-29 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.9E-29 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 1.9E-29 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 SUPERFAMILY SSF53335 140 431 6.23E-69 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Gene3D G3DSA:1.10.287.730 147 169 2.8E-9 T 21-04-2016 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Gene3D G3DSA:3.30.70.1170 170 230 4.5E-14 T 21-04-2016 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Gene3D G3DSA:1.10.940.10 2 146 1.5E-42 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 Gene3D G3DSA:3.40.50.150 233 431 2.4E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 317 328 - T 21-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PANTHER PTHR22807:SF30 35 431 3.0E-116 T 21-04-2016 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 SUPERFAMILY SSF48013 5 147 2.09E-36 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APL_RS08285 0d568873bcd1955f5b67d8fd5ec37d78 432 PANTHER PTHR22807 35 431 3.0E-116 T 21-04-2016 APL_RS01555 fe83706e9665d91caf874d5af801c29b 395 Gene3D G3DSA:3.30.1150.10 307 391 3.7E-19 T 21-04-2016 APL_RS01555 fe83706e9665d91caf874d5af801c29b 395 SUPERFAMILY SSF74653 308 393 1.44E-18 T 21-04-2016 APL_RS01555 fe83706e9665d91caf874d5af801c29b 395 Pfam PF06519 TolA C-terminal 305 390 2.1E-19 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APL_RS01555 fe83706e9665d91caf874d5af801c29b 395 TIGRFAM TIGR02794 tolA_full: protein TolA 141 390 9.9E-45 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APL_RS01555 fe83706e9665d91caf874d5af801c29b 395 TIGRFAM TIGR02794 tolA_full: protein TolA 10 215 1.5E-18 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APL_RS02400 bda5bca99b511c78975429b672036a20 148 PIRSF PIRSF006173 1 148 6.2E-55 T 21-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APL_RS02400 bda5bca99b511c78975429b672036a20 148 Pfam PF03692 Putative zinc- or iron-chelating domain 27 97 2.6E-5 T 21-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APL_RS02400 bda5bca99b511c78975429b672036a20 148 PANTHER PTHR37421 3 147 1.7E-57 T 21-04-2016 APL_RS02400 bda5bca99b511c78975429b672036a20 148 PANTHER PTHR37421:SF1 3 147 1.7E-57 T 21-04-2016 APL_RS05980 983f078c7175f227d73e0b96a0574782 151 Gene3D G3DSA:1.10.10.10 52 97 5.9E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05980 983f078c7175f227d73e0b96a0574782 151 Gene3D G3DSA:1.10.10.10 6 51 1.8E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05980 983f078c7175f227d73e0b96a0574782 151 Pfam PF02631 RecX family 28 142 6.1E-31 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APL_RS05980 983f078c7175f227d73e0b96a0574782 151 PANTHER PTHR33602 6 151 2.5E-29 T 21-04-2016 APL_RS05980 983f078c7175f227d73e0b96a0574782 151 Gene3D G3DSA:1.10.10.10 98 142 9.4E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05980 983f078c7175f227d73e0b96a0574782 151 Hamap MF_01114 Regulatory protein RecX [recX]. 3 148 13.782 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APL_RS05980 983f078c7175f227d73e0b96a0574782 151 PANTHER PTHR33602:SF1 6 151 2.5E-29 T 21-04-2016 APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 SUPERFAMILY SSF52980 302 391 1.64E-8 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 Gene3D G3DSA:3.40.50.300 2 141 1.9E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 PANTHER PTHR33295:SF8 4 397 1.3E-102 T 21-04-2016 APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 Pfam PF13635 Domain of unknown function (DUF4143) 237 343 1.5E-8 T 21-04-2016 IPR025420 Domain of unknown function DUF4143 APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 SUPERFAMILY SSF52540 3 204 8.15E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 PANTHER PTHR33295 4 397 1.3E-102 T 21-04-2016 APL_RS06185 bfacbcaa5d35b5424b92df04d6279a9c 402 Pfam PF13173 AAA domain 23 152 8.6E-34 T 21-04-2016 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 SUPERFAMILY SSF52540 3 204 3.04E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 Gene3D G3DSA:1.20.272.10 208 325 3.2E-26 T 21-04-2016 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 PANTHER PTHR11669 11 258 7.1E-57 T 21-04-2016 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 SUPERFAMILY SSF48019 207 322 2.21E-22 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 321 2.9E-29 T 21-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 Gene3D G3DSA:3.40.50.300 5 162 1.8E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 10 197 8.0E-60 T 21-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 PANTHER PTHR11669:SF8 11 258 7.1E-57 T 21-04-2016 APL_RS09640 f6b62c0b0101b4687a7b3099902dd0b8 327 Pfam PF13177 DNA polymerase III, delta subunit 8 164 4.5E-41 T 21-04-2016 APL_RS03130 c9e3d10a897152add1285aff87421502 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 382 1.6E-131 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.2E-82 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APL_RS03130 c9e3d10a897152add1285aff87421502 404 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 21-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APL_RS03130 c9e3d10a897152add1285aff87421502 404 PANTHER PTHR32195 1 399 7.8E-177 T 21-04-2016 APL_RS03130 c9e3d10a897152add1285aff87421502 404 Pfam PF03222 Tryptophan/tyrosine permease family 1 389 8.0E-129 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APL_RS03130 c9e3d10a897152add1285aff87421502 404 PANTHER PTHR32195:SF17 1 399 7.8E-177 T 21-04-2016 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 1.1E-122 T 21-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.1E-58 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PANTHER PTHR30009:SF0 1 418 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PANTHER PTHR30009:SF0 470 649 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PANTHER PTHR30009 1 418 0.0 T 21-04-2016 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PANTHER PTHR30009 470 649 0.0 T 21-04-2016 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.1E-94 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 5.8E-284 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07205 3286b4d44ce5edaefa1f3eb5eefa693e 649 Pfam PF01578 Cytochrome C assembly protein 89 297 2.3E-55 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 Gene3D G3DSA:3.10.420.10 11 161 3.6E-57 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 6.8E-40 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 21 38 6.8E-40 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 6.8E-40 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 6.8E-40 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 17 157 7.6E-63 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 Pfam PF02556 Preprotein translocase subunit SecB 14 153 1.4E-52 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PANTHER PTHR36918:SF1 1 166 5.8E-80 T 21-04-2016 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 PANTHER PTHR36918 1 166 5.8E-80 T 21-04-2016 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 SUPERFAMILY SSF54611 10 151 2.83E-51 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS07955 98bc2b5775273db1c661841c8d7a8c04 166 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.473 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APL_RS01040 3f99b006e7be17b1f7c015f2337f46f1 157 PIRSF PIRSF006162 1 157 7.5E-47 T 21-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APL_RS01040 3f99b006e7be17b1f7c015f2337f46f1 157 Pfam PF04608 Phosphatidylglycerophosphatase A 11 153 1.5E-46 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APL_RS01040 3f99b006e7be17b1f7c015f2337f46f1 157 PANTHER PTHR36305 1 157 6.4E-48 T 21-04-2016 APL_RS01040 3f99b006e7be17b1f7c015f2337f46f1 157 SUPERFAMILY SSF101307 4 155 2.09E-42 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APL_RS03885 edc52987dd8954dee57427748e9eadbb 276 PIRSF PIRSF018455 4 276 1.4E-115 T 21-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APL_RS03885 edc52987dd8954dee57427748e9eadbb 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 37 270 1.1E-96 T 21-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APL_RS03885 edc52987dd8954dee57427748e9eadbb 276 SUPERFAMILY SSF55166 22 273 1.96E-105 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APL_RS03885 edc52987dd8954dee57427748e9eadbb 276 Gene3D G3DSA:3.30.1380.10 22 272 6.5E-103 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 Gene3D G3DSA:3.40.30.10 1 87 4.7E-22 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 SUPERFAMILY SSF47616 68 195 1.53E-17 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 190 3.7E-7 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 SUPERFAMILY SSF52833 1 79 1.57E-18 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 PANTHER PTHR11260:SF285 1 198 8.8E-47 T 21-04-2016 APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 Gene3D G3DSA:1.20.1050.10 88 190 1.7E-22 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 PANTHER PTHR11260 1 198 8.8E-47 T 21-04-2016 APL_RS08050 b903beec1f76c86e5e845729b740c4ee 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 71 2.1E-10 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 3.0E-20 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 Gene3D G3DSA:3.40.80.10 6 180 6.0E-68 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 SUPERFAMILY SSF55846 4 181 6.94E-67 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 SMART SM00644 18 169 1.3E-55 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 PANTHER PTHR30417 1 182 9.1E-80 T 21-04-2016 APL_RS01635 3a5ce2d86297b9f7692f20616acebd8b 182 PANTHER PTHR30417:SF4 1 182 9.1E-80 T 21-04-2016 APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 PANTHER PTHR30213:SF0 8 270 3.0E-78 T 21-04-2016 APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 7 268 22.006 T 21-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 Pfam PF03631 Virulence factor BrkB 19 263 1.1E-56 T 21-04-2016 IPR017039 Virulence factor BrkB APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 PIRSF PIRSF035875 4 275 5.6E-59 T 21-04-2016 IPR017039 Virulence factor BrkB APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 PANTHER PTHR30213 8 270 3.0E-78 T 21-04-2016 APL_RS10340 864e6c080b47cce11fe659cf8240512e 276 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 8 264 3.0E-80 T 21-04-2016 IPR017039 Virulence factor BrkB APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 PANTHER PTHR30457 1 254 4.6E-94 T 21-04-2016 APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 Gene3D G3DSA:3.40.1210.10 1 252 2.8E-86 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 38.074 T 21-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 Pfam PF01975 Survival protein SurE 3 190 2.7E-56 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 SUPERFAMILY SSF64167 1 253 1.15E-83 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APL_RS10230 e2826b6c8e2cc999ced07a02b9147e0e 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 242 2.6E-72 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 187 23.933 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 4 183 2.4E-50 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 PANTHER PTHR37481:SF1 1 190 2.5E-39 T 21-04-2016 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 PIRSF PIRSF028513 1 187 3.1E-30 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 PANTHER PTHR37481 1 190 2.5E-39 T 21-04-2016 APL_RS01745 e4bf254960364e78128425fe8a52b8f9 198 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 185 5.0E-49 T 21-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 2.8E-44 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.154 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 Gene3D G3DSA:2.40.50.100 20 82 1.9E-32 T 21-04-2016 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 21-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 SUPERFAMILY SSF110324 2 83 5.23E-34 T 21-04-2016 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 PANTHER PTHR15893 1 85 1.3E-52 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.4E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.4E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.4E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10600 c17ebf6d43206efee172352538ecb83c 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.2E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 Gene3D G3DSA:3.40.1050.10 1 214 1.2E-72 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 SMART SM00947 30 193 9.7E-65 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 Pfam PF00484 Carbonic anhydrase 37 187 6.6E-50 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 PANTHER PTHR11002 1 208 3.3E-115 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 PANTHER PTHR11002:SF11 1 208 3.3E-115 T 21-04-2016 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 SUPERFAMILY SSF53056 2 212 2.22E-72 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03780 988a63232b39dbb90590f173d1a6da8b 238 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 Pfam PF03882 MukF winged-helix domain 4 118 2.0E-53 T 21-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 2 441 55.154 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 SUPERFAMILY SSF140570 120 282 2.48E-77 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 PIRSF PIRSF018282 2 441 1.4E-241 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 Pfam PF17193 MukF C-terminal domain 284 441 6.1E-71 T 21-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 SUPERFAMILY SSF46785 9 119 1.5E-45 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 Pfam PF17192 MukF middle domain 122 282 2.4E-83 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APL_RS03040 c9c47bb6a627f1b526e93eb7335934c4 443 Gene3D G3DSA:1.10.10.10 25 119 5.4E-45 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 Gene3D G3DSA:3.40.190.10 35 166 4.1E-51 T 21-04-2016 APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 SUPERFAMILY SSF53850 36 273 2.3E-75 T 21-04-2016 APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 PANTHER PTHR30429:SF1 1 273 2.9E-128 T 21-04-2016 APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 PANTHER PTHR30429 1 273 2.9E-128 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 11 273 4.1E-125 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 Pfam PF03180 NLPA lipoprotein 37 273 1.2E-91 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS04755 ff0f5922ca92b3a030587d917b137218 273 PIRSF PIRSF002854 1 273 2.5E-94 T 21-04-2016 IPR004872 Lipoprotein NlpA family APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 Pfam PF00591 Glycosyl transferase family, a/b domain 74 323 9.9E-94 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 Gene3D G3DSA:1.20.970.10 5 70 8.4E-22 T 21-04-2016 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 SUPERFAMILY SSF47648 1 69 7.85E-16 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 62 8.7E-14 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 332 1.4E-118 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 Gene3D G3DSA:3.40.1030.10 73 333 3.1E-96 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 333 37.371 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 SUPERFAMILY SSF52418 72 332 2.35E-88 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 PANTHER PTHR11922:SF5 1 333 6.7E-99 T 21-04-2016 APL_RS06095 3f2d20d79e8ddec4256f0331bc159f7f 334 PANTHER PTHR11922 1 333 6.7E-99 T 21-04-2016 APL_RS00435 2d806aa3726150bb605e0d9e769fd595 208 SMART SM01120 32 205 1.2E-80 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APL_RS00435 2d806aa3726150bb605e0d9e769fd595 208 SUPERFAMILY SSF101473 2 206 1.83E-59 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APL_RS00435 2d806aa3726150bb605e0d9e769fd595 208 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 204 2.9E-77 T 21-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- APL_RS00435 2d806aa3726150bb605e0d9e769fd595 208 Pfam PF02734 DAK2 domain 32 204 7.3E-57 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APL_RS00435 2d806aa3726150bb605e0d9e769fd595 208 PANTHER PTHR28629 1 208 1.5E-70 T 21-04-2016 APL_RS03165 47f2fe39ae351118e84de276a59641d2 181 ProDom PD487572 PRECURSOR PM0067 HI0983 SIGNAL 25 180 7.0E-42 T 21-04-2016 APL_RS06230 6229df6863c9f83bf15e36cce98bd170 353 Gene3D G3DSA:3.20.20.70 7 335 2.7E-115 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS06230 6229df6863c9f83bf15e36cce98bd170 353 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 332 3.3E-75 T 21-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APL_RS06230 6229df6863c9f83bf15e36cce98bd170 353 PANTHER PTHR22893 3 329 1.6E-120 T 21-04-2016 APL_RS06230 6229df6863c9f83bf15e36cce98bd170 353 PANTHER PTHR22893:SF7 3 329 1.6E-120 T 21-04-2016 APL_RS06230 6229df6863c9f83bf15e36cce98bd170 353 SUPERFAMILY SSF51395 4 333 2.3E-105 T 21-04-2016 APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 PANTHER PTHR12735:SF23 1 100 2.0E-42 T 21-04-2016 APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 PIRSF PIRSF003113 1 100 1.3E-35 T 21-04-2016 IPR002634 BolA protein APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 PANTHER PTHR12735 1 100 2.0E-42 T 21-04-2016 APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 SUPERFAMILY SSF82657 1 89 2.09E-29 T 21-04-2016 IPR002634 BolA protein APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 Gene3D G3DSA:3.30.300.90 1 101 6.0E-32 T 21-04-2016 IPR002634 BolA protein APL_RS01200 d48e68be2e822d39de3cb2279d254846 103 Pfam PF01722 BolA-like protein 11 84 2.8E-29 T 21-04-2016 IPR002634 BolA protein APL_RS00665 065bb0a92b28e099a1e1b01623259812 284 PANTHER PTHR30477 2 278 1.4E-130 T 21-04-2016 APL_RS00665 065bb0a92b28e099a1e1b01623259812 284 Gene3D G3DSA:1.10.3470.10 53 232 2.0E-10 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS00665 065bb0a92b28e099a1e1b01623259812 284 SUPERFAMILY SSF81345 5 261 9.02E-38 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS00665 065bb0a92b28e099a1e1b01623259812 284 Pfam PF00950 ABC 3 transport family 10 265 4.5E-88 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APL_RS00665 065bb0a92b28e099a1e1b01623259812 284 PANTHER PTHR30477:SF13 2 278 1.4E-130 T 21-04-2016 APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 PIRSF PIRSF004649 1 212 1.2E-56 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 Gene3D G3DSA:3.10.450.50 117 175 7.4E-19 T 21-04-2016 IPR032710 NTF2-like domain APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 Gene3D G3DSA:3.10.450.50 29 73 7.4E-19 T 21-04-2016 IPR032710 NTF2-like domain APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 Gene3D G3DSA:1.10.10.640 74 114 2.7E-17 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 Gene3D G3DSA:1.10.10.640 176 206 2.7E-17 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 PANTHER PTHR36573 2 212 6.5E-66 T 21-04-2016 APL_RS06765 9f07858c8b4645efac234371fbed28ee 212 Pfam PF05494 MlaC protein 35 200 1.6E-51 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 SUPERFAMILY SSF53474 5 354 9.86E-103 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 Gene3D G3DSA:3.40.50.1820 254 352 7.0E-30 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 Gene3D G3DSA:3.40.50.1820 23 222 7.0E-30 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 PANTHER PTHR32268:SF11 1 355 5.4E-162 T 21-04-2016 APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 Pfam PF00561 alpha/beta hydrolase fold 40 338 8.7E-45 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 PIRSF PIRSF000443 1 358 1.6E-124 T 21-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 10 354 1.6E-135 T 21-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 3 356 43.998 T 21-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APL_RS02270 115b7d23852e7d2c108ca2e60f374264 358 PANTHER PTHR32268 1 355 5.4E-162 T 21-04-2016 APL_RS00475 2209b4c343dbbbc22d1eb91d9abb2702 154 PANTHER PTHR35335:SF1 3 126 6.0E-20 T 21-04-2016 APL_RS00475 2209b4c343dbbbc22d1eb91d9abb2702 154 PANTHER PTHR35335 3 126 6.0E-20 T 21-04-2016 APL_RS00475 2209b4c343dbbbc22d1eb91d9abb2702 154 Pfam PF04186 FxsA cytoplasmic membrane protein 10 115 2.0E-29 T 21-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 APL_RS00890 5b639a74fd1e05b754ee2441f0647afd 328 Pfam PF01979 Amidohydrolase family 21 327 1.7E-9 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APL_RS00890 5b639a74fd1e05b754ee2441f0647afd 328 ProDom PD049525 CYTOSINE HI0843 HYDROLASE RELATED METAL-DEPENDENT DEAMINASE HYDROLASES PM1882 286 327 2.0E-18 T 21-04-2016 APL_RS00890 5b639a74fd1e05b754ee2441f0647afd 328 PANTHER PTHR32027 5 327 2.2E-67 T 21-04-2016 APL_RS00890 5b639a74fd1e05b754ee2441f0647afd 328 SUPERFAMILY SSF51556 21 327 1.25E-63 T 21-04-2016 IPR032466 Metal-dependent hydrolase APL_RS00890 5b639a74fd1e05b754ee2441f0647afd 328 Gene3D G3DSA:3.20.20.140 22 327 5.2E-76 T 21-04-2016 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 PANTHER PTHR30073 1 330 8.7E-197 T 21-04-2016 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 SUPERFAMILY SSF55681 5 330 3.12E-100 T 21-04-2016 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 3.1E-197 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.97 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 Pfam PF03590 Aspartate-ammonia ligase 9 243 1.9E-95 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 Gene3D G3DSA:3.30.930.10 2 328 8.5E-156 T 21-04-2016 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 PANTHER PTHR30073:SF5 1 330 8.7E-197 T 21-04-2016 APL_RS09770 aa59ba996ad25504eb08b43927b01ab8 330 PIRSF PIRSF001555 1 330 3.2E-157 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 Gene3D G3DSA:3.20.20.70 6 243 2.7E-61 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 SUPERFAMILY SSF51395 6 316 1.04E-70 T 21-04-2016 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 Pfam PF01207 Dihydrouridine synthase (Dus) 9 291 6.5E-83 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 PANTHER PTHR11082:SF26 1 315 6.4E-169 T 21-04-2016 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 PANTHER PTHR11082 1 315 6.4E-169 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 13 315 50.028 T 21-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS01580 1e177a24f8af700f00ea1223417482e6 320 PIRSF PIRSF006621 2 319 6.8E-76 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APL_RS00490 e5940c31158f46723f6cd03b90b1d7e8 146 PIRSF PIRSF018193 1 142 4.9E-62 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B APL_RS00490 e5940c31158f46723f6cd03b90b1d7e8 146 SUPERFAMILY SSF89946 3 121 1.83E-36 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain APL_RS00490 e5940c31158f46723f6cd03b90b1d7e8 146 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 114 29.519 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B APL_RS00490 e5940c31158f46723f6cd03b90b1d7e8 146 Gene3D G3DSA:3.30.70.970 4 121 3.8E-45 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain APL_RS00490 e5940c31158f46723f6cd03b90b1d7e8 146 Pfam PF06877 Regulator of ribonuclease activity B 9 110 5.2E-28 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 SMART SM00530 9 65 1.4E-14 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 Pfam PF01381 Helix-turn-helix 10 65 1.2E-13 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 Gene3D G3DSA:1.10.260.40 5 68 1.2E-22 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 Pfam PF00717 Peptidase S24-like 125 170 6.0E-10 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 Gene3D G3DSA:2.10.109.10 118 215 5.0E-24 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 PANTHER PTHR33516:SF3 73 218 1.0E-15 T 21-04-2016 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 SUPERFAMILY SSF47413 4 72 6.17E-15 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 PANTHER PTHR33516 73 218 1.0E-15 T 21-04-2016 APL_RS02590 67a157efebf78a1cec269270172e0c1a 218 SUPERFAMILY SSF51306 82 209 5.23E-22 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 PANTHER PTHR30465 190 333 1.2E-139 T 21-04-2016 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 PANTHER PTHR30465 1 168 1.2E-139 T 21-04-2016 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 SUPERFAMILY SSF161098 92 160 1.64E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 SUPERFAMILY SSF161098 196 317 1.64E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 332 9.4E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 Gene3D G3DSA:1.10.3720.10 199 326 8.7E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 Gene3D G3DSA:1.10.3720.10 90 163 8.7E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 PANTHER PTHR30465:SF0 190 333 1.2E-139 T 21-04-2016 APL_RS00350 14fc7c5130bf4da30ed972395d1ffbee 334 PANTHER PTHR30465:SF0 1 168 1.2E-139 T 21-04-2016 APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 Gene3D G3DSA:3.40.50.300 6 197 8.0E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 SUPERFAMILY SSF52540 16 199 6.9E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 Pfam PF01926 50S ribosome-binding GTPase 28 146 2.2E-21 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 9.0E-75 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.165 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APL_RS00495 625da8f443aac69ebb6ca6c32cef151f 206 PANTHER PTHR11649 6 199 6.9E-57 T 21-04-2016 APL_RS07365 73a880a032b43e46084a0939624a417c 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 1.5E-72 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS07365 73a880a032b43e46084a0939624a417c 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 2.2E-113 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS07365 73a880a032b43e46084a0939624a417c 266 PANTHER PTHR32502 1 266 7.6E-147 T 21-04-2016 APL_RS07365 73a880a032b43e46084a0939624a417c 266 PANTHER PTHR32502:SF4 1 266 7.6E-147 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APL_RS04890 8d00c5e6be3da463935dd12a08e41c3f 287 SUPERFAMILY SSF103481 187 286 3.79E-6 T 21-04-2016 APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 SUPERFAMILY SSF69500 1 143 2.35E-54 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.166 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 PANTHER PTHR10472 2 143 1.3E-64 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 143 4.6E-65 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 Gene3D G3DSA:3.50.80.10 1 143 4.5E-54 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APL_RS10335 90552d498cc5f1306e84a694764dac5a 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 142 5.6E-51 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 Gene3D G3DSA:3.40.109.10 6 219 6.8E-74 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 PANTHER PTHR23026:SF101 6 114 4.4E-78 T 21-04-2016 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 PANTHER PTHR23026:SF101 131 220 4.4E-78 T 21-04-2016 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 SUPERFAMILY SSF55469 8 218 3.93E-56 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 Pfam PF00881 Nitroreductase family 15 199 1.5E-26 T 21-04-2016 IPR029479 Nitroreductase APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 PANTHER PTHR23026 6 114 4.4E-78 T 21-04-2016 APL_RS03185 27e2296367aa3ea7ee947320568db6db 220 PANTHER PTHR23026 131 220 4.4E-78 T 21-04-2016 APL_RS10240 4e46cc48313fa13d36637e9af7134746 191 SUPERFAMILY SSF54106 147 190 2.75E-7 T 21-04-2016 IPR018392 LysM domain APL_RS10240 4e46cc48313fa13d36637e9af7134746 191 SMART SM00257 147 191 1.0E-4 T 21-04-2016 IPR018392 LysM domain APL_RS10240 4e46cc48313fa13d36637e9af7134746 191 Pfam PF01476 LysM domain 148 190 3.0E-5 T 21-04-2016 IPR018392 LysM domain APL_RS10240 4e46cc48313fa13d36637e9af7134746 191 Gene3D G3DSA:3.10.350.10 147 190 1.7E-9 T 21-04-2016 IPR018392 LysM domain APL_RS03790 3d79ccffcc5f710def53099958737526 163 Pfam PF13710 ACT domain 12 73 2.3E-16 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.1E-25 T 21-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS03790 3d79ccffcc5f710def53099958737526 163 Gene3D G3DSA:3.30.70.1150 83 160 2.5E-27 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 PANTHER PTHR30239 1 160 4.1E-92 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 SUPERFAMILY SSF55021 79 160 5.65E-25 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 SUPERFAMILY SSF55021 2 74 2.69E-22 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 Gene3D G3DSA:3.30.70.260 1 77 1.3E-36 T 21-04-2016 APL_RS03790 3d79ccffcc5f710def53099958737526 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.4E-67 T 21-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APL_RS03790 3d79ccffcc5f710def53099958737526 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-31 T 21-04-2016 APL_RS01155 4024bcdd22104ee73863eed855a5afa6 178 SUPERFAMILY SSF52540 1 104 2.77E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01155 4024bcdd22104ee73863eed855a5afa6 178 Gene3D G3DSA:3.40.50.300 1 141 6.4E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 202 1.1E-120 T 21-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 SUPERFAMILY SSF52540 2 197 4.01E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 177 1.8E-39 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 Gene3D G3DSA:3.40.50.300 5 194 7.7E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 PIRSF PIRSF005624 1 210 8.5E-54 T 21-04-2016 APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 46.756 T 21-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APL_RS08555 93229caa9a7307d91fca483e195d4a9c 211 PANTHER PTHR31715 1 210 8.3E-129 T 21-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 TIGRFAM TIGR00109 hemH: ferrochelatase 2 318 8.0E-112 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 PANTHER PTHR11108 5 319 2.4E-127 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 21-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 Gene3D G3DSA:3.40.50.1400 4 199 1.5E-69 T 21-04-2016 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 Pfam PF00762 Ferrochelatase 5 318 6.0E-113 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 SUPERFAMILY SSF53800 3 317 2.62E-104 T 21-04-2016 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 Gene3D G3DSA:3.40.50.1400 200 318 1.6E-35 T 21-04-2016 APL_RS10275 46964edee66462ecd43c3523d5f4fa79 319 Hamap MF_00323 Ferrochelatase [hemH]. 4 319 38.068 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Pfam PF00271 Helicase conserved C-terminal domain 493 603 2.4E-15 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 SMART SM00490 519 603 4.1E-10 T 21-04-2016 IPR001650 Helicase, C-terminal APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Gene3D G3DSA:3.40.50.300 489 615 8.1E-20 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 SMART SM00487 148 347 6.3E-17 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 965 9.8E-150 T 21-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 SUPERFAMILY SSF52540 277 342 3.3E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 SUPERFAMILY SSF52540 482 650 3.3E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799:SF610 800 841 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799:SF610 408 695 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799:SF610 1 8 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799:SF610 148 359 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799:SF610 893 969 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 70.412 T 21-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Gene3D G3DSA:3.40.50.300 154 325 1.8E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 Pfam PF00176 SNF2 family N-terminal domain 172 448 1.2E-14 T 21-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799 800 841 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799 408 695 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799 1 8 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799 148 359 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 PANTHER PTHR10799 893 969 6.8E-218 T 21-04-2016 APL_RS01625 2f303ede69ae4f1c8d771d9242043eae 969 SUPERFAMILY SSF52540 137 359 2.99E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02055 8588f438eb7904f6df227c105619b393 316 Pfam PF00639 PPIC-type PPIASE domain 177 269 1.7E-23 T 21-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APL_RS02055 8588f438eb7904f6df227c105619b393 316 SUPERFAMILY SSF109998 29 195 2.26E-30 T 21-04-2016 IPR027304 Trigger factor/SurA domain APL_RS02055 8588f438eb7904f6df227c105619b393 316 SUPERFAMILY SSF54534 169 269 2.55E-27 T 21-04-2016 APL_RS02055 8588f438eb7904f6df227c105619b393 316 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 209 230 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APL_RS02055 8588f438eb7904f6df227c105619b393 316 PANTHER PTHR10657 3 313 3.8E-57 T 21-04-2016 APL_RS02055 8588f438eb7904f6df227c105619b393 316 PANTHER PTHR10657:SF15 3 313 3.8E-57 T 21-04-2016 APL_RS02055 8588f438eb7904f6df227c105619b393 316 Pfam PF09312 SurA N-terminal domain 39 133 8.1E-12 T 21-04-2016 IPR015391 SurA N-terminal APL_RS02055 8588f438eb7904f6df227c105619b393 316 Gene3D G3DSA:3.10.50.40 168 293 3.0E-31 T 21-04-2016 APL_RS02265 ee20a1dacc4712b229b46087c665a0d9 265 PANTHER PTHR11907:SF10 1 262 1.6E-105 T 21-04-2016 APL_RS02265 ee20a1dacc4712b229b46087c665a0d9 265 SUPERFAMILY SSF56235 2 251 1.76E-44 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS02265 ee20a1dacc4712b229b46087c665a0d9 265 PANTHER PTHR11907 1 262 1.6E-105 T 21-04-2016 APL_RS02265 ee20a1dacc4712b229b46087c665a0d9 265 Gene3D G3DSA:3.60.20.10 1 251 2.4E-62 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APL_RS02265 ee20a1dacc4712b229b46087c665a0d9 265 Pfam PF13230 Glutamine amidotransferases class-II 1 260 6.9E-108 T 21-04-2016 IPR026869 Putative glutamine amidotransferase type 2 APL_RS02250 bcd90bc28f707488c16203f7caf6ec6a 162 Pfam PF04093 rod shape-determining protein MreD 6 154 1.4E-39 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APL_RS02250 bcd90bc28f707488c16203f7caf6ec6a 162 PANTHER PTHR37484 1 162 1.5E-60 T 21-04-2016 APL_RS02250 bcd90bc28f707488c16203f7caf6ec6a 162 PIRSF PIRSF018472 1 162 4.4E-44 T 21-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type APL_RS02250 bcd90bc28f707488c16203f7caf6ec6a 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 153 9.6E-34 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 PANTHER PTHR11092 1 289 1.4E-119 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 289 1.2E-98 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 PANTHER PTHR11092:SF0 1 289 1.4E-119 T 21-04-2016 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 Pfam PF08338 Domain of unknown function (DUF1731) 249 289 1.1E-14 T 21-04-2016 IPR013549 Domain of unknown function DUF1731 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 6.0E-20 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 Gene3D G3DSA:3.40.50.720 1 244 1.9E-26 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS06790 51126b1357be2b4a2f5df3ffcd68096e 295 SUPERFAMILY SSF51735 1 286 2.39E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS04355 ce28e52dec675de5bc6d880d63994606 390 Gene3D G3DSA:2.70.70.10 244 390 1.9E-38 T 21-04-2016 APL_RS04355 ce28e52dec675de5bc6d880d63994606 390 PANTHER PTHR21666:SF213 18 390 3.1E-108 T 21-04-2016 APL_RS04355 ce28e52dec675de5bc6d880d63994606 390 SUPERFAMILY SSF51261 208 388 2.12E-45 T 21-04-2016 IPR011055 Duplicated hybrid motif APL_RS04355 ce28e52dec675de5bc6d880d63994606 390 PANTHER PTHR21666 18 390 3.1E-108 T 21-04-2016 APL_RS04355 ce28e52dec675de5bc6d880d63994606 390 Pfam PF01551 Peptidase family M23 292 385 2.9E-26 T 21-04-2016 IPR016047 Peptidase M23 APL_RS10085 83f69745bbe739c9077fe6efeea6f5d9 255 Pfam PF01435 Peptidase family M48 54 241 1.4E-30 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APL_RS10085 83f69745bbe739c9077fe6efeea6f5d9 255 PANTHER PTHR22726 17 251 1.3E-57 T 21-04-2016 APL_RS10085 83f69745bbe739c9077fe6efeea6f5d9 255 Gene3D G3DSA:3.30.2010.10 62 132 4.4E-15 T 21-04-2016 APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 3 103 5.0E-48 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 Pfam PF04269 Protein of unknown function, DUF440 4 103 8.6E-46 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 SUPERFAMILY SSF102816 1 103 8.24E-52 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 Gene3D G3DSA:3.10.450.140 4 103 4.7E-45 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 PIRSF PIRSF004916 1 103 1.2E-49 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS07095 6c2e305d7164cb66bb3c4e4efecb4a95 103 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 103 30.341 T 21-04-2016 IPR007376 dsDNA mimic, putative APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 Gene3D G3DSA:3.90.230.10 172 426 8.8E-81 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 Pfam PF00557 Metallopeptidase family M24 174 404 1.2E-57 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 Gene3D G3DSA:3.40.350.10 9 171 3.1E-48 T 21-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 341 353 - T 21-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 SUPERFAMILY SSF53092 9 167 7.67E-45 T 21-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 SUPERFAMILY SSF55920 168 426 9.16E-79 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 PANTHER PTHR10804 9 426 1.2E-148 T 21-04-2016 APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 PANTHER PTHR10804:SF17 9 426 1.2E-148 T 21-04-2016 APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 SMART SM01011 9 143 5.6E-56 T 21-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APL_RS03465 39fd05470dd21b0c935f6648a3374a84 428 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 128 6.0E-34 T 21-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APL_RS08530 6480fab350e903ef52092eb09b5a5a1a 109 PANTHER PTHR30561:SF1 1 108 1.7E-42 T 21-04-2016 APL_RS08530 6480fab350e903ef52092eb09b5a5a1a 109 SUPERFAMILY SSF103481 7 106 1.96E-18 T 21-04-2016 APL_RS08530 6480fab350e903ef52092eb09b5a5a1a 109 Pfam PF00893 Small Multidrug Resistance protein 3 94 2.4E-24 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APL_RS08530 6480fab350e903ef52092eb09b5a5a1a 109 PANTHER PTHR30561 1 108 1.7E-42 T 21-04-2016 APL_RS01570 13617c07273e08b67eaba9122315045d 284 SUPERFAMILY SSF103481 180 279 2.62E-11 T 21-04-2016 APL_RS01570 13617c07273e08b67eaba9122315045d 284 PANTHER PTHR22911 2 284 1.1E-49 T 21-04-2016 APL_RS01570 13617c07273e08b67eaba9122315045d 284 SUPERFAMILY SSF103481 36 135 3.4E-5 T 21-04-2016 APL_RS01570 13617c07273e08b67eaba9122315045d 284 PANTHER PTHR22911:SF6 2 284 1.1E-49 T 21-04-2016 APL_RS01570 13617c07273e08b67eaba9122315045d 284 Pfam PF00892 EamA-like transporter family 1 133 8.2E-7 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS01570 13617c07273e08b67eaba9122315045d 284 Pfam PF00892 EamA-like transporter family 143 275 5.6E-8 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 Gene3D G3DSA:1.20.1250.20 208 383 1.5E-15 T 21-04-2016 APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 Gene3D G3DSA:1.20.1250.20 5 194 9.6E-30 T 21-04-2016 APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 Pfam PF07690 Major Facilitator Superfamily 20 329 3.5E-33 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 PANTHER PTHR23501 1 388 1.3E-178 T 21-04-2016 APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 SUPERFAMILY SSF103473 4 386 7.59E-56 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS03055 ce46dc6fcb32d09274e6c86a6d557dda 391 PANTHER PTHR23501:SF89 1 388 1.3E-178 T 21-04-2016 APL_RS05675 8919040fdbc70df033a3bf44939b1cec 333 PANTHER PTHR10361:SF31 1 330 2.0E-122 T 21-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APL_RS05675 8919040fdbc70df033a3bf44939b1cec 333 PANTHER PTHR10361 1 330 2.0E-122 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APL_RS05675 8919040fdbc70df033a3bf44939b1cec 333 Pfam PF01758 Sodium Bile acid symporter family 47 240 6.0E-46 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APL_RS05675 8919040fdbc70df033a3bf44939b1cec 333 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 327 3.0E-123 T 21-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APL_RS05675 8919040fdbc70df033a3bf44939b1cec 333 PIRSF PIRSF005508 1 333 4.8E-121 T 21-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APL_RS02615 e82db6dfdaf0d9945179deab1aecc5c5 174 Gene3D G3DSA:3.40.50.150 62 113 1.5E-4 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02615 e82db6dfdaf0d9945179deab1aecc5c5 174 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 6 170 1.9E-29 T 21-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 PANTHER PTHR30408 49 235 5.3E-19 T 21-04-2016 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 Pfam PF01420 Type I restriction modification DNA specificity domain 3 166 1.4E-12 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 Pfam PF01420 Type I restriction modification DNA specificity domain 236 392 4.5E-11 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 SUPERFAMILY SSF116734 2 184 2.78E-31 T 21-04-2016 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 PANTHER PTHR30408:SF7 49 235 5.3E-19 T 21-04-2016 APL_RS03315 30c908a6e649e91abf0303d2c78d653e 413 SUPERFAMILY SSF116734 234 406 1.28E-32 T 21-04-2016 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 372 1.5E-24 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 SUPERFAMILY SSF56601 9 281 1.06E-75 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 Gene3D G3DSA:2.60.410.10 282 372 1.1E-27 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 SUPERFAMILY SSF69189 281 374 1.0E-24 T 21-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 261 4.5E-96 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 1.5E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 1.5E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 1.5E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 PANTHER PTHR21581 27 391 1.3E-140 T 21-04-2016 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 Gene3D G3DSA:3.40.710.10 32 281 2.4E-91 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 PANTHER PTHR21581:SF4 27 391 1.3E-140 T 21-04-2016 APL_RS08475 4ddc02a78c30155f9714560650f87c1f 392 SMART SM00936 281 372 6.6E-32 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APL_RS07330 930dd4081ed2d933acb03b4d670c5a41 56 PANTHER PTHR35534 1 56 2.3E-29 T 21-04-2016 APL_RS07330 930dd4081ed2d933acb03b4d670c5a41 56 SUPERFAMILY SSF57829 2 55 9.77E-20 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APL_RS07330 930dd4081ed2d933acb03b4d670c5a41 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.4E-22 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APL_RS07330 930dd4081ed2d933acb03b4d670c5a41 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.1E-21 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APL_RS07330 930dd4081ed2d933acb03b4d670c5a41 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.344 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 PIRSF PIRSF006181 1 158 7.3E-57 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 1.0E-55 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 PANTHER PTHR30411:SF0 1 158 7.3E-71 T 21-04-2016 APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 PANTHER PTHR30411 1 158 7.3E-71 T 21-04-2016 APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 SUPERFAMILY SSF55826 2 155 5.1E-47 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 Gene3D G3DSA:3.90.960.10 1 157 1.2E-60 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS06380 1f8f1a2dd49a39030d1fd044be0bfbc9 158 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 4.8E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APL_RS10755 3f790f9c20206168b14243bd1107da79 268 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 1.2E-103 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PANTHER PTHR10804:SF75 4 265 6.6E-165 T 21-04-2016 APL_RS10755 3f790f9c20206168b14243bd1107da79 268 Pfam PF00557 Metallopeptidase family M24 13 243 3.6E-52 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PANTHER PTHR10804 4 265 6.6E-165 T 21-04-2016 APL_RS10755 3f790f9c20206168b14243bd1107da79 268 Gene3D G3DSA:3.90.230.10 7 257 4.1E-97 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.3E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 5.3E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 5.3E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APL_RS10755 3f790f9c20206168b14243bd1107da79 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 5.3E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APL_RS10755 3f790f9c20206168b14243bd1107da79 268 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 41.806 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APL_RS10755 3f790f9c20206168b14243bd1107da79 268 SUPERFAMILY SSF55920 7 256 4.71E-89 T 21-04-2016 IPR000994 Peptidase M24, structural domain APL_RS10755 3f790f9c20206168b14243bd1107da79 268 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APL_RS05695 4199a0dd23cd70e342de646a039a6fba 93 Pfam PF06961 Protein of unknown function (DUF1294) 13 67 5.5E-24 T 21-04-2016 IPR010718 Protein of unknown function DUF1294 APL_RS05695 4199a0dd23cd70e342de646a039a6fba 93 PANTHER PTHR12962 1 74 8.7E-15 T 21-04-2016 APL_RS05695 4199a0dd23cd70e342de646a039a6fba 93 PANTHER PTHR12962:SF1 1 74 8.7E-15 T 21-04-2016 APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 Gene3D G3DSA:1.10.10.10 10 41 9.7E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 SUPERFAMILY SSF53098 160 333 2.28E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 Pfam PF13551 Winged helix-turn helix 11 74 4.0E-17 T 21-04-2016 APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 SUPERFAMILY SSF46689 18 114 3.4E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 Gene3D G3DSA:3.30.420.10 159 319 7.2E-25 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS04955 3f264425ac8c7524de0cc212184539eb 346 Pfam PF00665 Integrase core domain 161 283 1.8E-22 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 PIRSF PIRSF005784 6 190 4.1E-81 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 7 182 1.3E-78 T 21-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 PANTHER PTHR11938:SF64 1 187 1.2E-75 T 21-04-2016 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 Pfam PF04060 Putative Fe-S cluster 47 78 4.2E-13 T 21-04-2016 IPR007202 4Fe-4S domain GO:0051536 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 Pfam PF14697 4Fe-4S dicluster domain 109 163 1.6E-16 T 21-04-2016 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 116 127 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 PANTHER PTHR11938 1 187 1.2E-75 T 21-04-2016 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 SUPERFAMILY SSF54862 40 175 8.64E-30 T 21-04-2016 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 Gene3D G3DSA:3.30.70.20 110 176 1.9E-17 T 21-04-2016 APL_RS00855 8d5478060019a9ce158b8e3d567bbad0 203 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 7 187 40.784 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APL_RS10590 635d3aaebd714e7237136d4db9dd7dcc 137 PANTHER PTHR33452:SF4 4 133 2.1E-36 T 21-04-2016 APL_RS10590 635d3aaebd714e7237136d4db9dd7dcc 137 Pfam PF07681 DoxX 12 91 5.0E-12 T 21-04-2016 IPR032808 DoxX family APL_RS10590 635d3aaebd714e7237136d4db9dd7dcc 137 PANTHER PTHR33452 4 133 2.1E-36 T 21-04-2016 APL_RS00660 ca3a8c7729ecf07a30a76833ca44dc0b 276 PANTHER PTHR30477 7 275 1.1E-141 T 21-04-2016 APL_RS00660 ca3a8c7729ecf07a30a76833ca44dc0b 276 Gene3D G3DSA:1.10.3470.10 64 268 3.1E-13 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS00660 ca3a8c7729ecf07a30a76833ca44dc0b 276 Pfam PF00950 ABC 3 transport family 14 267 6.3E-90 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APL_RS00660 ca3a8c7729ecf07a30a76833ca44dc0b 276 PANTHER PTHR30477:SF9 7 275 1.1E-141 T 21-04-2016 APL_RS00660 ca3a8c7729ecf07a30a76833ca44dc0b 276 SUPERFAMILY SSF81345 8 266 5.49E-43 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS01760 88a03a634eeb4825b5683979f609d205 149 PANTHER PTHR30373:SF3 12 145 1.7E-23 T 21-04-2016 APL_RS01760 88a03a634eeb4825b5683979f609d205 149 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 14 125 1.5E-20 T 21-04-2016 IPR007621 TPM domain APL_RS01760 88a03a634eeb4825b5683979f609d205 149 PANTHER PTHR30373 12 145 1.7E-23 T 21-04-2016 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 PANTHER PTHR11749 4 224 2.9E-133 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 PANTHER PTHR11749:SF7 4 224 2.9E-133 T 21-04-2016 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 SUPERFAMILY SSF51366 6 219 1.11E-74 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 Gene3D G3DSA:3.20.20.70 4 219 9.9E-92 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 218 2.5E-95 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 205 1.6E-88 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APL_RS09675 297cecbadfdf7e747f5932a631a47ed1 224 PIRSF PIRSF001461 2 224 1.4E-101 T 21-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APL_RS01345 57b8ff69bc75ce698e4147c6cb5d887a 144 SUPERFAMILY SSF55961 1 143 2.96E-33 T 21-04-2016 APL_RS01345 57b8ff69bc75ce698e4147c6cb5d887a 144 PANTHER PTHR12901 1 143 3.5E-54 T 21-04-2016 APL_RS01345 57b8ff69bc75ce698e4147c6cb5d887a 144 Gene3D G3DSA:3.30.530.20 1 143 2.0E-44 T 21-04-2016 IPR023393 START-like domain APL_RS01345 57b8ff69bc75ce698e4147c6cb5d887a 144 PANTHER PTHR12901:SF7 1 143 3.5E-54 T 21-04-2016 APL_RS01345 57b8ff69bc75ce698e4147c6cb5d887a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 5.2E-32 T 21-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 PANTHER PTHR11839:SF5 6 206 6.7E-88 T 21-04-2016 APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 Pfam PF00293 NUDIX domain 53 177 1.0E-10 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 Gene3D G3DSA:3.90.79.10 12 203 2.2E-46 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 SUPERFAMILY SSF55811 6 205 1.62E-38 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 200 2.0E-63 T 21-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APL_RS10305 5baedec1e2e965cc118e8ca7453b7d68 207 PANTHER PTHR11839 6 206 6.7E-88 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PANTHER PTHR22912 204 341 1.8E-29 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PANTHER PTHR22912 58 188 1.8E-29 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PANTHER PTHR22912 6 42 1.8E-29 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 332 3.6E-65 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06630 39fb4664807341b634697a020a11479c 428 Gene3D G3DSA:3.50.50.60 175 349 8.9E-30 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06630 39fb4664807341b634697a020a11479c 428 SUPERFAMILY SSF51905 221 346 1.15E-30 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06630 39fb4664807341b634697a020a11479c 428 SUPERFAMILY SSF51905 5 117 1.15E-30 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 7.8E-13 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.8E-13 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 7.8E-13 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 7.8E-13 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 Gene3D G3DSA:3.50.50.60 5 174 3.9E-20 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.6E-7 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.6E-7 T 21-04-2016 APL_RS06630 39fb4664807341b634697a020a11479c 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.6E-7 T 21-04-2016 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 Gene3D G3DSA:1.25.40.10 319 460 0.001 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 Gene3D G3DSA:1.25.40.10 61 156 2.9E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 SUPERFAMILY SSF48452 79 211 2.53E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 10 804 1.3E-270 T 21-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 SUPERFAMILY SSF48452 319 504 3.03E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10200 6e0e0e2cf633380958f3ee50552e5950 804 SUPERFAMILY SSF48452 100 156 3.03E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS03045 992e5443580e0715c7d667543888c524 237 Pfam PF04288 MukE-like family 10 235 1.5E-115 T 21-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 APL_RS08210 3bb7656525dc9fe91d41a9184495ed85 356 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 352 1.2E-161 T 21-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 APL_RS10425 34267ac795635c31e3a324061d124853 151 Pfam PF00692 dUTPase 16 149 1.5E-42 T 21-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APL_RS10425 34267ac795635c31e3a324061d124853 151 SUPERFAMILY SSF51283 1 150 1.44E-54 T 21-04-2016 IPR029054 dUTPase-like APL_RS10425 34267ac795635c31e3a324061d124853 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.245 T 21-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APL_RS10425 34267ac795635c31e3a324061d124853 151 PANTHER PTHR11241 1 150 7.1E-54 T 21-04-2016 APL_RS10425 34267ac795635c31e3a324061d124853 151 Gene3D G3DSA:2.70.40.10 9 150 1.7E-52 T 21-04-2016 IPR029054 dUTPase-like APL_RS10425 34267ac795635c31e3a324061d124853 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 150 7.2E-49 T 21-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 SUPERFAMILY SSF158651 1 72 1.18E-25 T 21-04-2016 APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 PIRSF PIRSF006188 1 73 2.7E-34 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 72 22.664 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 Gene3D G3DSA:1.10.3390.10 1 71 1.8E-30 T 21-04-2016 IPR023202 YejL-like domain APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 Pfam PF07208 Protein of unknown function (DUF1414) 26 70 7.9E-23 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 APL_RS03065 7ba476f9a9da4e4a6a4e3b699cd39602 73 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 5 70 6.0E-24 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 APL_RS06505 a64454669c78c0cbb166303ac458b057 212 Gene3D G3DSA:3.40.109.10 1 89 5.7E-53 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06505 a64454669c78c0cbb166303ac458b057 212 Gene3D G3DSA:3.40.109.10 122 206 5.7E-53 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06505 a64454669c78c0cbb166303ac458b057 212 Pfam PF00881 Nitroreductase family 7 185 1.6E-23 T 21-04-2016 IPR029479 Nitroreductase APL_RS06505 a64454669c78c0cbb166303ac458b057 212 PANTHER PTHR23026:SF116 5 211 7.4E-39 T 21-04-2016 APL_RS06505 a64454669c78c0cbb166303ac458b057 212 SUPERFAMILY SSF55469 1 204 2.09E-48 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06505 a64454669c78c0cbb166303ac458b057 212 PANTHER PTHR23026 5 211 7.4E-39 T 21-04-2016 APL_RS00845 b7cb9e8f961a2a61f762d7fa449d3e5c 155 TIGRFAM TIGR02826 RNR_activ_nrdG3: anaerobic ribonucleoside-triphosphate reductase activating protein 6 151 1.6E-59 T 21-04-2016 IPR014191 Anaerobic ribonucleoside-triphosphate reductase activator APL_RS00845 b7cb9e8f961a2a61f762d7fa449d3e5c 155 Gene3D G3DSA:3.20.20.70 24 101 1.9E-6 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS00845 b7cb9e8f961a2a61f762d7fa449d3e5c 155 SUPERFAMILY SSF102114 17 114 1.06E-7 T 21-04-2016 APL_RS00845 b7cb9e8f961a2a61f762d7fa449d3e5c 155 Pfam PF13353 4Fe-4S single cluster domain 23 123 8.7E-12 T 21-04-2016 APL_RS05465 cac4cf4dd98dfbf99d64fe67f6890cc9 205 Pfam PF01810 LysE type translocator 16 203 6.6E-33 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS05465 cac4cf4dd98dfbf99d64fe67f6890cc9 205 PANTHER PTHR30086:SF3 3 205 3.8E-56 T 21-04-2016 APL_RS05465 cac4cf4dd98dfbf99d64fe67f6890cc9 205 PIRSF PIRSF006324 1 205 1.3E-52 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS05465 cac4cf4dd98dfbf99d64fe67f6890cc9 205 PANTHER PTHR30086 3 205 3.8E-56 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 PANTHER PTHR37831 2 139 4.7E-65 T 21-04-2016 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 SUPERFAMILY SSF102546 1 139 2.75E-45 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 PANTHER PTHR37831:SF1 2 139 4.7E-65 T 21-04-2016 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 Pfam PF05025 RbsD / FucU transport protein family 1 137 6.1E-49 T 21-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.746 T 21-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 APL_RS08865 be0a0518c2b3f8d4d38a63d80d2be11c 139 Gene3D G3DSA:3.40.1650.10 1 138 1.1E-40 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 Pfam PF06418 CTP synthase N-terminus 5 266 1.2E-125 T 21-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 Gene3D G3DSA:3.40.50.300 2 281 1.5E-133 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 PANTHER PTHR11550 1 543 0.0 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 Gene3D G3DSA:3.40.50.880 288 542 8.1E-100 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.1E-263 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 Pfam PF00117 Glutamine amidotransferase class-I 301 534 8.5E-63 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 SUPERFAMILY SSF52540 3 269 4.25E-121 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.412 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APL_RS00705 78c8b2cd557eb5105282b6f9eab029ee 545 SUPERFAMILY SSF52317 289 541 3.97E-88 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 SUPERFAMILY SSF46785 2 133 8.4E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 Gene3D G3DSA:1.10.10.10 1 136 7.6E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 PANTHER PTHR33221 2 132 4.5E-61 T 21-04-2016 APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 PANTHER PTHR33221:SF1 2 132 4.5E-61 T 21-04-2016 APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 21-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 Pfam PF02082 Transcriptional regulator 1 83 3.5E-28 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type APL_RS04870 79bc460e12d705f79a60dd38f526e8c1 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.5E-47 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type APL_RS04380 d9e9dbd536677af79aa6534300e2abe6 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 59 1.0E-6 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS04380 d9e9dbd536677af79aa6534300e2abe6 184 PANTHER PTHR30328 1 180 4.5E-21 T 21-04-2016 APL_RS04380 d9e9dbd536677af79aa6534300e2abe6 184 SUPERFAMILY SSF46689 6 67 1.95E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS04380 d9e9dbd536677af79aa6534300e2abe6 184 PANTHER PTHR30328:SF20 1 180 4.5E-21 T 21-04-2016 APL_RS04380 d9e9dbd536677af79aa6534300e2abe6 184 Gene3D G3DSA:1.10.357.10 3 179 2.3E-13 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APL_RS10320 ddeb039b0485eca03cfa74e42081d067 142 SUPERFAMILY SSF103481 43 140 3.27E-18 T 21-04-2016 APL_RS10320 ddeb039b0485eca03cfa74e42081d067 142 Pfam PF00892 EamA-like transporter family 5 138 8.4E-24 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS10320 ddeb039b0485eca03cfa74e42081d067 142 PANTHER PTHR22911 5 140 7.5E-26 T 21-04-2016 APL_RS01455 2a85929a0147ade29aca8eb70025e3a4 288 PANTHER PTHR30193:SF10 12 288 1.0E-115 T 21-04-2016 APL_RS01455 2a85929a0147ade29aca8eb70025e3a4 288 SUPERFAMILY SSF161098 8 277 8.76E-52 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01455 2a85929a0147ade29aca8eb70025e3a4 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 285 4.7E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01455 2a85929a0147ade29aca8eb70025e3a4 288 Gene3D G3DSA:1.10.3720.10 6 274 4.2E-51 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01455 2a85929a0147ade29aca8eb70025e3a4 288 PANTHER PTHR30193 12 288 1.0E-115 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 Gene3D G3DSA:3.40.50.150 204 446 1.4E-35 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06245 e7a447237d038673e28767021feb1815 550 SUPERFAMILY SSF53335 9 49 1.61E-96 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06245 e7a447237d038673e28767021feb1815 550 SUPERFAMILY SSF53335 87 544 1.61E-96 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06245 e7a447237d038673e28767021feb1815 550 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS06245 e7a447237d038673e28767021feb1815 550 PANTHER PTHR30408 185 522 8.2E-36 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 PANTHER PTHR30408:SF4 185 522 8.2E-36 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 Pfam PF02384 N-6 DNA Methylase 180 498 1.3E-61 T 21-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APL_RS06245 e7a447237d038673e28767021feb1815 550 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 9.5E-20 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 351 375 9.5E-20 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 232 246 9.5E-20 T 21-04-2016 APL_RS06245 e7a447237d038673e28767021feb1815 550 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 9.5E-20 T 21-04-2016 APL_RS06310 404afe795091d5df9087efedf99762c1 85 SUPERFAMILY SSF143120 1 48 1.44E-12 T 21-04-2016 APL_RS06310 404afe795091d5df9087efedf99762c1 85 Gene3D G3DSA:3.40.1620.10 14 46 8.4E-7 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS06310 404afe795091d5df9087efedf99762c1 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 45 1.2E-7 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS06310 404afe795091d5df9087efedf99762c1 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 58 5.4E-14 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 PANTHER PTHR30006 7 346 3.5E-115 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 SUPERFAMILY SSF53850 26 331 4.94E-70 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 Gene3D G3DSA:3.40.190.10 132 271 1.8E-47 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 Pfam PF13343 Bacterial extracellular solute-binding protein 78 293 2.1E-31 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 PANTHER PTHR30006:SF2 7 346 3.5E-115 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 PIRSF PIRSF002825 4 343 7.1E-68 T 21-04-2016 IPR026045 Ferric binding protein APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 Gene3D G3DSA:3.40.190.10 6 125 2.0E-34 T 21-04-2016 APL_RS07635 be7287f062eadb0aabc71e449f76b091 346 Gene3D G3DSA:3.40.190.10 272 325 2.0E-34 T 21-04-2016 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Gene3D G3DSA:3.40.50.300 472 703 5.4E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Gene3D G3DSA:1.20.1560.10 146 455 1.5E-78 T 21-04-2016 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Pfam PF00664 ABC transporter transmembrane region 161 428 1.5E-60 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Gene3D G3DSA:3.90.70.10 10 133 4.5E-32 T 21-04-2016 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 14 711 0.0 T 21-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Pfam PF00005 ABC transporter 489 638 5.4E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 SMART SM00382 498 684 6.0E-20 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 SUPERFAMILY SSF52540 462 709 4.78E-91 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 PANTHER PTHR24221:SF246 1 710 5.9E-302 T 21-04-2016 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 Pfam PF03412 Peptidase C39 family 9 133 4.5E-30 T 21-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 PANTHER PTHR24221 1 710 5.9E-302 T 21-04-2016 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 SUPERFAMILY SSF90123 146 457 9.03E-68 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APL_RS07620 1a82e9ab26fbc26c7901b1cd1a75f3d1 711 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 PANTHER PTHR11780 3 490 1.9E-222 T 21-04-2016 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 20 453 1.8E-178 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Pfam PF13375 RnfC Barrel sandwich hybrid domain 21 123 2.2E-34 T 21-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 770 244.433 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 SUPERFAMILY SSF142019 102 311 2.09E-57 T 21-04-2016 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Pfam PF12838 4Fe-4S dicluster domain 384 436 1.1E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 PANTHER PTHR11780:SF1 3 490 1.9E-222 T 21-04-2016 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Gene3D G3DSA:1.10.1060.10 368 459 5.8E-18 T 21-04-2016 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Pfam PF10531 SLBB domain 304 352 2.7E-8 T 21-04-2016 IPR019554 Soluble ligand binding domain APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 SUPERFAMILY SSF46548 343 451 1.22E-19 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 147 291 1.3E-46 T 21-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 424 435 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS00860 211d306bb1e94b21d116a728e2391df8 770 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 385 396 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.3E-39 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 21-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 SUPERFAMILY SSF141091 1 102 1.7E-37 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 5.1E-45 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.098 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10595 9e812a80901c8ac116f74d0d9cff4ddf 103 PANTHER PTHR21349 1 102 1.7E-45 T 21-04-2016 APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 Gene3D G3DSA:3.40.980.10 6 186 2.1E-50 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 SMART SM00852 10 156 3.1E-19 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 PANTHER PTHR10192 3 194 9.6E-83 T 21-04-2016 APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 Pfam PF00994 Probable molybdopterin binding domain 11 150 1.0E-26 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 SUPERFAMILY SSF53218 7 191 9.82E-47 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS08015 49fbe51f5132be71d39ac71968ad2c7d 194 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 7 149 1.1E-39 T 21-04-2016 IPR001453 MoaB/Mog domain APL_RS08920 d86b89d5a952da59ede13e0eef700680 443 PIRSF PIRSF028135 8 443 1.5E-148 T 21-04-2016 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like APL_RS08920 d86b89d5a952da59ede13e0eef700680 443 Pfam PF07805 HipA-like N-terminal domain 164 252 1.7E-11 T 21-04-2016 IPR012894 HipA, N-terminal subdomain 2 APL_RS08920 d86b89d5a952da59ede13e0eef700680 443 Pfam PF07804 HipA-like C-terminal domain 262 352 1.1E-11 T 21-04-2016 IPR012893 HipA-like, C-terminal APL_RS01980 d0222b2da778c99dc3360808894cd803 153 PANTHER PTHR21058 1 153 7.2E-77 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01980 d0222b2da778c99dc3360808894cd803 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.457 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01980 d0222b2da778c99dc3360808894cd803 153 Gene3D G3DSA:3.40.50.960 3 151 7.1E-67 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01980 d0222b2da778c99dc3360808894cd803 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 1.6E-57 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01980 d0222b2da778c99dc3360808894cd803 153 SUPERFAMILY SSF52121 5 153 1.14E-62 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS01980 d0222b2da778c99dc3360808894cd803 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 4.1E-59 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 Pfam PF03023 MviN-like protein 30 485 4.9E-145 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206 226 457 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206 483 498 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206 68 84 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 517 9.6E-128 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PIRSF PIRSF002869 1 523 2.7E-142 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206:SF90 226 457 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206:SF90 483 498 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PANTHER PTHR11206:SF90 68 84 2.3E-75 T 21-04-2016 APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 372 391 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 54 70 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 268 294 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 35 54 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 423 440 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 142 166 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS08270 7c0150bc0b3129d7af677cf1bc8169eb 523 PRINTS PR01806 Virulence factor MviN signature 166 187 3.1E-72 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APL_RS02785 54c8e208447284b1b99985d57b533beb 482 TIGRFAM TIGR00835 agcS: amino acid carrier protein 24 447 2.7E-162 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 311 329 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 416 436 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 216 235 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 188 206 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 356 378 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PRINTS PR00175 Sodium/alanine symporter signature 97 119 2.5E-53 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 Pfam PF01235 Sodium:alanine symporter family 62 459 2.5E-152 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PANTHER PTHR30330:SF1 9 479 2.5E-248 T 21-04-2016 APL_RS02785 54c8e208447284b1b99985d57b533beb 482 PANTHER PTHR30330 9 479 2.5E-248 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 Gene3D G3DSA:3.30.420.10 3 156 3.7E-65 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 7.6E-63 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PANTHER PTHR30194 1 169 1.1E-70 T 21-04-2016 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 21-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.3E-43 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.3E-43 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.3E-43 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.3E-43 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.3E-43 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 1.9E-84 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.901 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APL_RS06035 b7f871672059f30ae955bc2fc6643cb1 192 SUPERFAMILY SSF53098 3 155 5.31E-55 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS02200 76265b9aed83a3a955e6fb1c5c11a182 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 6.6E-93 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APL_RS02200 76265b9aed83a3a955e6fb1c5c11a182 333 PANTHER PTHR38772 2 331 1.4E-150 T 21-04-2016 APL_RS02200 76265b9aed83a3a955e6fb1c5c11a182 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 41.913 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 Pfam PF02810 SEC-C motif 7 22 1.8E-5 T 21-04-2016 IPR004027 SEC-C motif APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 Pfam PF02810 SEC-C motif 140 154 3.1E-6 T 21-04-2016 IPR004027 SEC-C motif APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 SUPERFAMILY SSF103642 136 156 4.25E-7 T 21-04-2016 APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 SUPERFAMILY SSF54427 28 132 7.01E-33 T 21-04-2016 IPR032710 NTF2-like domain APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 4 131 26.173 T 21-04-2016 IPR023006 Uncharacterised protein family UPF0225 APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 Gene3D G3DSA:3.10.450.50 6 155 1.6E-52 T 21-04-2016 IPR032710 NTF2-like domain APL_RS08810 30e0df987cefc1bbae2323e4fe2afe7b 158 PANTHER PTHR33747 12 155 4.7E-21 T 21-04-2016 APL_RS02645 6d230c1d3261e6a51168ba48fd1af11f 123 Pfam PF10828 Protein of unknown function (DUF2570) 12 117 9.0E-45 T 21-04-2016 IPR022538 Protein of unknown function DUF2570 APL_RS02645 6d230c1d3261e6a51168ba48fd1af11f 123 ProDom PD064145 TRANSMEMBRANE LYTIC RZ MEMBRANE HI1414 29 116 3.0E-7 T 21-04-2016 APL_RS04365 22a9f7123576057bfec308cc0f0c0bc3 211 Pfam PF01810 LysE type translocator 14 198 2.4E-34 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS04365 22a9f7123576057bfec308cc0f0c0bc3 211 PANTHER PTHR30086 1 206 2.8E-63 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS04365 22a9f7123576057bfec308cc0f0c0bc3 211 PANTHER PTHR30086:SF0 1 206 2.8E-63 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 SUPERFAMILY SSF53756 53 423 4.17E-16 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 Gene3D G3DSA:3.40.50.2000 54 86 0.001 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 Pfam PF00534 Glycosyl transferases group 1 250 402 6.9E-13 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417:SF2 1 113 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417:SF2 192 424 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417:SF2 132 142 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417 1 113 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417 192 424 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 PANTHER PTHR23417 132 142 4.6E-126 T 21-04-2016 APL_RS05900 4219f09f58f4169b00878d46678c00a9 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 4.1E-61 T 21-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 APL_RS02380 1b40f01e55135d409cb8729a68e0ad0f 172 PANTHER PTHR23091 1 152 1.0E-18 T 21-04-2016 APL_RS02380 1b40f01e55135d409cb8729a68e0ad0f 172 PANTHER PTHR23091:SF187 1 152 1.0E-18 T 21-04-2016 APL_RS02380 1b40f01e55135d409cb8729a68e0ad0f 172 Gene3D G3DSA:3.40.630.30 1 167 8.4E-31 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS02380 1b40f01e55135d409cb8729a68e0ad0f 172 SUPERFAMILY SSF55729 3 163 2.38E-28 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS02380 1b40f01e55135d409cb8729a68e0ad0f 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 147 3.3E-12 T 21-04-2016 APL_RS07335 999b30977cb6501554a4db5fba9331c5 175 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.4E-16 T 21-04-2016 IPR003772 Protein of unknown function DUF177 APL_RS07335 999b30977cb6501554a4db5fba9331c5 175 PANTHER PTHR38099 2 175 7.6E-71 T 21-04-2016 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 Pfam PF04205 FMN-binding domain 100 188 6.8E-18 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 PANTHER PTHR36118 3 208 3.6E-67 T 21-04-2016 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 PIRSF PIRSF006091 1 203 1.6E-66 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 SMART SM00900 100 192 1.1E-32 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 12 190 6.6E-58 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 4 194 25.7 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APL_RS00875 a148e2dcdc1105adbb80c381545aecc8 210 PANTHER PTHR36118:SF1 3 208 3.6E-67 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PANTHER PTHR21087 1 169 2.3E-69 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 Pfam PF01202 Shikimate kinase 13 169 8.7E-57 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 21-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.016 T 21-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 SUPERFAMILY SSF52540 4 169 8.08E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PRINTS PR01100 Shikimate kinase family signature 31 44 7.6E-29 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PRINTS PR01100 Shikimate kinase family signature 77 86 7.6E-29 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PRINTS PR01100 Shikimate kinase family signature 59 67 7.6E-29 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PRINTS PR01100 Shikimate kinase family signature 98 115 7.6E-29 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 PRINTS PR01100 Shikimate kinase family signature 7 22 7.6E-29 T 21-04-2016 APL_RS00995 d89bd80b03ca5e7577e74099fb378371 173 Gene3D G3DSA:3.40.50.300 2 171 7.3E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 PANTHER PTHR11986:SF79 2 393 2.6E-160 T 21-04-2016 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 PANTHER PTHR11986 2 393 2.6E-160 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 391 42.499 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 Pfam PF00202 Aminotransferase class-III 14 390 6.8E-107 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 Gene3D G3DSA:3.90.1150.10 304 392 1.6E-33 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 Gene3D G3DSA:3.90.1150.10 2 57 1.6E-33 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 Gene3D G3DSA:3.40.640.10 61 302 1.3E-84 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 391 7.3E-137 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 PIRSF PIRSF000521 2 393 5.7E-40 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 SUPERFAMILY SSF53383 15 391 2.25E-117 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS01250 c82b61f935dda17b86f4d57703fbda64 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APL_RS01640 ed222dff104393596ce29658cf0281cb 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 2.5E-107 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APL_RS01640 ed222dff104393596ce29658cf0281cb 280 Gene3D G3DSA:3.40.50.150 1 280 5.4E-115 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01640 ed222dff104393596ce29658cf0281cb 280 PANTHER PTHR37426 2 280 2.3E-152 T 21-04-2016 APL_RS01640 ed222dff104393596ce29658cf0281cb 280 PANTHER PTHR37426:SF1 2 280 2.3E-152 T 21-04-2016 APL_RS01640 ed222dff104393596ce29658cf0281cb 280 SUPERFAMILY SSF53335 9 279 1.38E-95 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS01640 ed222dff104393596ce29658cf0281cb 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 39.896 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 175 2.8E-71 T 21-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 Gene3D G3DSA:3.40.50.2020 1 175 1.7E-76 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 SUPERFAMILY SSF53271 2 177 2.23E-55 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 Pfam PF00156 Phosphoribosyl transferase domain 13 162 7.6E-24 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 PANTHER PTHR22573:SF56 7 173 7.2E-79 T 21-04-2016 APL_RS03560 7e371a89bf9523431b73fc462d7e8fdf 179 PANTHER PTHR22573 7 173 7.2E-79 T 21-04-2016 APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 Gene3D G3DSA:3.60.21.10 1 91 8.3E-15 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 Gene3D G3DSA:3.60.21.10 155 194 8.3E-15 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 SUPERFAMILY SSF56300 136 212 7.1E-18 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 SUPERFAMILY SSF56300 2 105 7.1E-18 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 Pfam PF00149 Calcineurin-like phosphoesterase 2 191 1.1E-8 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APL_RS00235 7f3b6a3b8c6c47c2ef1d78f8f0695ae9 232 PIRSF PIRSF036446 1 229 1.9E-115 T 21-04-2016 IPR017056 Phosphoesterase, HI0762, predicted APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 426 2.9E-100 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 PIRSF PIRSF006603 9 457 4.9E-61 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 Pfam PF01554 MatE 21 180 1.3E-35 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 Pfam PF01554 MatE 248 409 7.9E-36 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 PANTHER PTHR11206:SF153 6 462 6.2E-157 T 21-04-2016 APL_RS01900 fc59081ae2382a176ea76f8108b298f9 463 PANTHER PTHR11206 6 462 6.2E-157 T 21-04-2016 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 PANTHER PTHR10285:SF7 278 316 9.5E-156 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 PANTHER PTHR10285:SF7 1 262 9.5E-156 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 SUPERFAMILY SSF52540 7 315 7.47E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 2.4E-14 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 Gene3D G3DSA:3.40.50.300 10 316 2.1E-106 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 180.706 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 5.9E-165 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 PIRSF PIRSF000545 1 316 2.1E-144 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 PANTHER PTHR10285 278 316 9.5E-156 T 21-04-2016 APL_RS07995 edc1558fc0daeb93433b38d28d1d8999 316 PANTHER PTHR10285 1 262 9.5E-156 T 21-04-2016 APL_RS08665 7a6f3e27e8c6452e199f74c292defb81 330 Pfam PF13692 Glycosyl transferases group 1 198 283 1.3E-6 T 21-04-2016 APL_RS08665 7a6f3e27e8c6452e199f74c292defb81 330 Gene3D G3DSA:3.40.50.2000 192 245 9.5E-6 T 21-04-2016 APL_RS08665 7a6f3e27e8c6452e199f74c292defb81 330 SUPERFAMILY SSF53756 13 320 7.18E-18 T 21-04-2016 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 Gene3D G3DSA:1.10.357.10 14 197 2.4E-32 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 SUPERFAMILY SSF46689 10 80 4.94E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 67 3.2E-13 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 PANTHER PTHR30055:SF58 3 202 6.0E-88 T 21-04-2016 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 3 202 36.458 T 21-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 APL_RS10420 d7ac5b7cf9e350c4f6c0168b0c5d0287 202 PANTHER PTHR30055 3 202 6.0E-88 T 21-04-2016 APL_RS08520 724a097fb677a146f5f500e8df4b77af 432 PANTHER PTHR30501:SF2 1 430 1.3E-127 T 21-04-2016 APL_RS08520 724a097fb677a146f5f500e8df4b77af 432 PIRSF PIRSF006054 4 429 2.9E-164 T 21-04-2016 IPR021144 Uncharacterised protein family UPF0597 APL_RS08520 724a097fb677a146f5f500e8df4b77af 432 Pfam PF03313 Serine dehydratase alpha chain 91 422 1.8E-46 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APL_RS08520 724a097fb677a146f5f500e8df4b77af 432 PANTHER PTHR30501 1 430 1.3E-127 T 21-04-2016 APL_RS08520 724a097fb677a146f5f500e8df4b77af 432 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 7 427 35.55 T 21-04-2016 IPR021144 Uncharacterised protein family UPF0597 APL_RS08390 421a6d458c60eb40bb8d9d3f4ac69bbb 382 PANTHER PTHR20961 242 350 3.1E-12 T 21-04-2016 APL_RS08390 421a6d458c60eb40bb8d9d3f4ac69bbb 382 Pfam PF04577 Protein of unknown function (DUF563) 150 348 3.2E-36 T 21-04-2016 IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 APL_RS08390 421a6d458c60eb40bb8d9d3f4ac69bbb 382 PIRSF PIRSF030158 10 382 1.9E-116 T 21-04-2016 IPR024698 Capsular polysaccharide biosynthesis protein, Cps23fI-type, predicted APL_RS02460 2ca97546719d7f9800acfced426d5737 334 Pfam PF03595 Voltage-dependent anion channel 22 322 3.0E-57 T 21-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 APL_RS02460 2ca97546719d7f9800acfced426d5737 334 PANTHER PTHR37955:SF1 12 328 2.8E-39 T 21-04-2016 APL_RS02460 2ca97546719d7f9800acfced426d5737 334 PANTHER PTHR37955 12 328 2.8E-39 T 21-04-2016 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 PANTHER PTHR24220 4 281 2.8E-129 T 21-04-2016 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 SMART SM00382 27 214 4.4E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS09845 60ec832160c97221f2a12190cca929d1 356 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 7.2E-116 T 21-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 SUPERFAMILY SSF50331 239 340 1.73E-12 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APL_RS09845 60ec832160c97221f2a12190cca929d1 356 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 PANTHER PTHR24220:SF123 4 281 2.8E-129 T 21-04-2016 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 Pfam PF12857 TOBE-like domain 287 340 1.4E-12 T 21-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 Pfam PF00005 ABC transporter 18 164 2.7E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS09845 60ec832160c97221f2a12190cca929d1 356 SUPERFAMILY SSF52540 3 246 3.88E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS09845 60ec832160c97221f2a12190cca929d1 356 Gene3D G3DSA:3.40.50.300 2 238 4.2E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 PANTHER PTHR10516 129 192 9.6E-59 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 PANTHER PTHR10516 1 83 9.6E-59 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 Gene3D G3DSA:3.10.50.40 8 80 3.2E-15 T 21-04-2016 APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 Gene3D G3DSA:3.10.50.40 126 141 3.2E-15 T 21-04-2016 APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 10 136 4.2E-10 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 SUPERFAMILY SSF54534 5 139 2.95E-32 T 21-04-2016 APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 PANTHER PTHR10516:SF316 129 192 9.6E-59 T 21-04-2016 APL_RS07685 c32a769bfc5973cf8bb9061b7f992673 198 PANTHER PTHR10516:SF316 1 83 9.6E-59 T 21-04-2016 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 Gene3D G3DSA:3.20.20.80 595 663 3.4E-151 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 Gene3D G3DSA:3.20.20.80 132 562 3.4E-151 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 93 667 2.6E-191 T 21-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 PANTHER PTHR32438 569 670 4.5E-171 T 21-04-2016 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 PANTHER PTHR32438 72 550 4.5E-171 T 21-04-2016 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 SUPERFAMILY SSF51445 577 666 2.56E-141 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 SUPERFAMILY SSF51445 125 549 2.56E-141 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 Pfam PF02446 4-alpha-glucanotransferase 141 647 5.7E-127 T 21-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 PANTHER PTHR32438:SF5 569 670 4.5E-171 T 21-04-2016 APL_RS06475 1459ffe6e7fd31e36484db416e082a70 672 PANTHER PTHR32438:SF5 72 550 4.5E-171 T 21-04-2016 APL_RS09560 c81b9defcf1b2999f84e5e98acb4c803 206 SUPERFAMILY SSF46626 132 199 8.08E-5 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APL_RS09560 c81b9defcf1b2999f84e5e98acb4c803 206 PANTHER PTHR30333 18 199 1.2E-35 T 21-04-2016 APL_RS09560 c81b9defcf1b2999f84e5e98acb4c803 206 PANTHER PTHR30333:SF1 18 199 1.2E-35 T 21-04-2016 APL_RS08615 cf38ec1c2f4f6b6aef093d594ee9f80d 228 Pfam PF10670 Domain of unknown function (DUF4198) 19 197 6.3E-13 T 21-04-2016 IPR019613 Protein of unknown function DUF4198 APL_RS06240 d8bc3999fde6a1e164e1fdde061905b8 404 Pfam PF01420 Type I restriction modification DNA specificity domain 24 188 1.4E-19 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APL_RS06240 d8bc3999fde6a1e164e1fdde061905b8 404 SUPERFAMILY SSF116734 225 402 1.8E-15 T 21-04-2016 APL_RS06240 d8bc3999fde6a1e164e1fdde061905b8 404 PANTHER PTHR30408:SF2 44 219 1.4E-13 T 21-04-2016 APL_RS06240 d8bc3999fde6a1e164e1fdde061905b8 404 SUPERFAMILY SSF116734 19 204 8.01E-40 T 21-04-2016 APL_RS06240 d8bc3999fde6a1e164e1fdde061905b8 404 PANTHER PTHR30408 44 219 1.4E-13 T 21-04-2016 APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 PIRSF PIRSF002741 14 515 3.0E-79 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 Gene3D G3DSA:3.40.190.10 150 293 2.9E-39 T 21-04-2016 APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 40 8.8E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 SUPERFAMILY SSF53850 54 523 1.25E-104 T 21-04-2016 APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 429 1.1E-72 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 PANTHER PTHR30290 56 502 1.0E-88 T 21-04-2016 APL_RS04440 e7fbc9290b3830d0f219c10d7a0eeecb 524 Gene3D G3DSA:3.10.105.10 294 493 1.1E-37 T 21-04-2016 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 Gene3D G3DSA:3.90.1150.10 383 497 7.0E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 75 429 5.3E-61 T 21-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 Gene3D G3DSA:1.20.1650.10 9 86 7.0E-6 T 21-04-2016 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 PANTHER PTHR11999:SF106 21 501 7.8E-264 T 21-04-2016 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 SUPERFAMILY SSF53383 19 497 1.34E-115 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 PANTHER PTHR11999 21 501 7.8E-264 T 21-04-2016 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 Gene3D G3DSA:3.40.640.10 97 382 6.0E-96 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS10465 3b5b5c00ec9899cc4ac1c029d2077ea2 511 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 313 334 - T 21-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 PANTHER PTHR11808:SF37 1 230 4.2E-207 T 21-04-2016 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 PANTHER PTHR11808:SF37 262 422 4.2E-207 T 21-04-2016 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 PIRSF PIRSF001434 1 422 9.3E-125 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 Gene3D G3DSA:3.40.640.10 2 283 2.4E-109 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 1.0E-127 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 419 5.7E-188 T 21-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 SUPERFAMILY SSF53383 1 419 1.53E-113 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 PANTHER PTHR11808 1 230 4.2E-207 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 PANTHER PTHR11808 262 422 4.2E-207 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APL_RS03655 7e6fa7442f80b65e8cebd84f4927c2de 422 Gene3D G3DSA:3.90.1150.10 285 421 4.4E-45 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 103 7.6E-12 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 Gene3D G3DSA:1.10.287.1080 1 95 2.8E-14 T 21-04-2016 APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 SUPERFAMILY SSF101386 1 103 1.38E-26 T 21-04-2016 APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 PIRSF PIRSF036521 1 107 1.1E-52 T 21-04-2016 IPR011411 NTP Pyrophosphohydrolase MazG-related APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 PANTHER PTHR14552:SF18 1 104 1.4E-44 T 21-04-2016 APL_RS10405 6bdf2ef01af85ea36efdac2268d6c4e5 107 PANTHER PTHR14552 1 104 1.4E-44 T 21-04-2016 APL_RS06695 342753ce5a89226f2923b8252547b818 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 5 325 40.161 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APL_RS06695 342753ce5a89226f2923b8252547b818 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 11 317 2.3E-116 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APL_RS06695 342753ce5a89226f2923b8252547b818 326 PANTHER PTHR30160:SF13 3 311 2.9E-95 T 21-04-2016 APL_RS06695 342753ce5a89226f2923b8252547b818 326 SUPERFAMILY SSF52540 45 155 1.77E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06695 342753ce5a89226f2923b8252547b818 326 Gene3D G3DSA:3.40.50.300 153 166 7.8E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06695 342753ce5a89226f2923b8252547b818 326 Gene3D G3DSA:3.40.50.300 42 106 7.8E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06695 342753ce5a89226f2923b8252547b818 326 PANTHER PTHR30160 3 311 2.9E-95 T 21-04-2016 APL_RS06695 342753ce5a89226f2923b8252547b818 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 320 6.0E-105 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APL_RS04760 29ac9d4683f7cf634a9739d4e1ab162c 225 PANTHER PTHR30450 4 225 2.5E-108 T 21-04-2016 APL_RS04760 29ac9d4683f7cf634a9739d4e1ab162c 225 SUPERFAMILY SSF161098 14 209 1.24E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04760 29ac9d4683f7cf634a9739d4e1ab162c 225 PANTHER PTHR30450:SF1 4 225 2.5E-108 T 21-04-2016 APL_RS04760 29ac9d4683f7cf634a9739d4e1ab162c 225 Gene3D G3DSA:1.10.3720.10 16 224 9.6E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04760 29ac9d4683f7cf634a9739d4e1ab162c 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 223 2.5E-24 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS03945 ca6955088c3bba06e9f2faff13c7b1b3 123 Pfam PF03788 LrgA family 20 111 6.8E-24 T 21-04-2016 IPR005538 LrgA/CidA family GO:0016021 APL_RS03945 ca6955088c3bba06e9f2faff13c7b1b3 123 PANTHER PTHR33931 1 115 6.3E-29 T 21-04-2016 APL_RS03945 ca6955088c3bba06e9f2faff13c7b1b3 123 PANTHER PTHR33931:SF2 1 115 6.3E-29 T 21-04-2016 APL_RS07220 420da1b947596156c2463c94f0059950 243 Pfam PF01578 Cytochrome C assembly protein 6 184 1.6E-32 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 5.4E-56 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS07220 420da1b947596156c2463c94f0059950 243 PANTHER PTHR30071 1 224 7.7E-76 T 21-04-2016 APL_RS07220 420da1b947596156c2463c94f0059950 243 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 7.0E-78 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.521 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 PANTHER PTHR33603:SF1 1 154 8.2E-72 T 21-04-2016 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 PANTHER PTHR33603 1 154 8.2E-72 T 21-04-2016 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 4.4E-86 T 21-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 PIRSF PIRSF004505 1 154 1.1E-42 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 1.2E-48 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 Gene3D G3DSA:3.40.1280.10 1 154 5.3E-55 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS08495 ed4038e7fa60e2faf7f77b8a8d957a84 155 SUPERFAMILY SSF75217 1 153 1.62E-51 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS02050 7932f0425913157a1ff96d430f54036c 289 PANTHER PTHR11727 7 275 1.4E-96 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APL_RS02050 7932f0425913157a1ff96d430f54036c 289 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 12 272 58.264 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APL_RS02050 7932f0425913157a1ff96d430f54036c 289 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 44 71 - T 21-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APL_RS02050 7932f0425913157a1ff96d430f54036c 289 SUPERFAMILY SSF53335 20 273 2.63E-79 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02050 7932f0425913157a1ff96d430f54036c 289 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 13 271 1.2E-92 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APL_RS02050 7932f0425913157a1ff96d430f54036c 289 Gene3D G3DSA:3.40.50.150 7 205 1.8E-69 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02050 7932f0425913157a1ff96d430f54036c 289 SMART SM00650 28 205 2.9E-88 T 21-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APL_RS02050 7932f0425913157a1ff96d430f54036c 289 Gene3D G3DSA:1.10.8.100 208 273 2.3E-26 T 21-04-2016 IPR023165 rRNA adenine dimethylase-like APL_RS02050 7932f0425913157a1ff96d430f54036c 289 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 271 4.8E-85 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 PRINTS PR00625 DnaJ domain signature 240 255 2.983396E-8 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 PRINTS PR00625 DnaJ domain signature 222 240 2.983396E-8 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 PRINTS PR00625 DnaJ domain signature 264 284 2.983396E-8 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 Gene3D G3DSA:1.10.287.110 218 280 7.9E-15 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 Gene3D G3DSA:1.10.3680.10 21 182 2.1E-30 T 21-04-2016 IPR029024 TerB-like APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 Pfam PF05099 Tellurite resistance protein TerB 54 175 3.9E-13 T 21-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 Pfam PF00226 DnaJ domain 220 281 9.1E-12 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 SUPERFAMILY SSF46565 135 281 7.01E-28 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 SMART SM00271 219 284 2.9E-17 T 21-04-2016 IPR001623 DnaJ domain APL_RS01575 6c6093855b90a7b4761e1eadf8b4b35d 286 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 286 41.254 T 21-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 APL_RS01885 ab022b55fbe71a23f7738208775200cb 150 Pfam PF04284 Protein of unknown function (DUF441) 10 147 2.1E-45 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APL_RS01885 ab022b55fbe71a23f7738208775200cb 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 150 18.911 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APL_RS01885 ab022b55fbe71a23f7738208775200cb 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 23 122 4.0E-29 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APL_RS02220 f05ca645f5bd54aecff635e759655c3e 76 Pfam PF07119 Protein of unknown function (DUF1375) 16 74 1.1E-8 T 21-04-2016 IPR010780 Protein of unknown function DUF1375 APL_RS00650 25d3fa4a3ad719f4485eb7ed2fa3fc53 124 Pfam PF07233 Protein of unknown function (DUF1425) 42 121 2.5E-11 T 21-04-2016 IPR010824 Protein of unknown function DUF1425 APL_RS03245 0140de1d698260d7d5551e9491842834 287 PANTHER PTHR30168 2 287 1.3E-124 T 21-04-2016 APL_RS03245 0140de1d698260d7d5551e9491842834 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 284 1.4E-122 T 21-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative APL_RS03245 0140de1d698260d7d5551e9491842834 287 SUPERFAMILY SSF55486 55 178 4.89E-5 T 21-04-2016 APL_RS05550 0f7084e027949aad754ea54df739547d 221 SMART SM00862 145 216 9.0E-25 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS05550 0f7084e027949aad754ea54df739547d 221 SUPERFAMILY SSF52172 1 118 3.84E-35 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS05550 0f7084e027949aad754ea54df739547d 221 Pfam PF00072 Response regulator receiver domain 3 111 4.8E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS05550 0f7084e027949aad754ea54df739547d 221 SUPERFAMILY SSF46894 118 216 9.64E-28 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS05550 0f7084e027949aad754ea54df739547d 221 Gene3D G3DSA:1.10.10.10 123 216 3.6E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05550 0f7084e027949aad754ea54df739547d 221 PANTHER PTHR26402 1 218 1.8E-113 T 21-04-2016 APL_RS05550 0f7084e027949aad754ea54df739547d 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 9.6E-22 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APL_RS05550 0f7084e027949aad754ea54df739547d 221 SMART SM00448 1 112 4.3E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS05550 0f7084e027949aad754ea54df739547d 221 PANTHER PTHR26402:SF279 1 218 1.8E-113 T 21-04-2016 APL_RS05550 0f7084e027949aad754ea54df739547d 221 Gene3D G3DSA:3.40.50.2300 1 122 2.9E-33 T 21-04-2016 APL_RS09290 1f5d7b9ca182f5b4589fd8addb22462d 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 41 91 1.4E-6 T 21-04-2016 IPR009241 Toxin HigB-like APL_RS09290 1f5d7b9ca182f5b4589fd8addb22462d 100 PANTHER PTHR41791 1 99 5.7E-25 T 21-04-2016 APL_RS09290 1f5d7b9ca182f5b4589fd8addb22462d 100 PANTHER PTHR41791:SF1 1 99 5.7E-25 T 21-04-2016 APL_RS09290 1f5d7b9ca182f5b4589fd8addb22462d 100 PIRSF PIRSF028744 1 100 2.6E-38 T 21-04-2016 IPR014056 Addiction module killer protein, predicted APL_RS09290 1f5d7b9ca182f5b4589fd8addb22462d 100 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 95 7.7E-37 T 21-04-2016 IPR014056 Addiction module killer protein, predicted APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.9E-8 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.9E-8 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.9E-8 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 PANTHER PTHR33154 4 101 2.3E-17 T 21-04-2016 APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 SUPERFAMILY SSF46785 3 92 1.59E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 Gene3D G3DSA:1.10.10.10 2 97 3.9E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 SMART SM00418 8 85 4.1E-15 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APL_RS05685 8339ba660ffe90d2e0392ba3861be0a8 104 Pfam PF12840 Helix-turn-helix domain 8 69 8.4E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 Gene3D G3DSA:3.40.50.10490 7 190 9.6E-53 T 21-04-2016 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 PIRSF PIRSF004692 1 311 5.8E-123 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 PANTHER PTHR38418 2 311 5.3E-43 T 21-04-2016 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 SMART SM00116 204 251 0.011 T 21-04-2016 IPR000644 CBS domain APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 SMART SM00116 269 310 15.0 T 21-04-2016 IPR000644 CBS domain APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 SUPERFAMILY SSF53697 2 280 3.56E-63 T 21-04-2016 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 Gene3D G3DSA:3.10.580.10 191 308 7.8E-32 T 21-04-2016 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 307 1.2E-112 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 Pfam PF01380 SIS domain 37 168 2.5E-31 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 Pfam PF00571 CBS domain 197 251 2.6E-8 T 21-04-2016 IPR000644 CBS domain APL_RS08375 56bd9a342815534fbe596083d0d23e95 311 Pfam PF00571 CBS domain 264 307 5.7E-7 T 21-04-2016 IPR000644 CBS domain APL_RS07140 129ee0aed1ec5cd77c413061ce3fa60d 97 SUPERFAMILY SSF47413 20 90 4.5E-13 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS07140 129ee0aed1ec5cd77c413061ce3fa60d 97 Pfam PF01381 Helix-turn-helix 35 86 6.6E-13 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS07140 129ee0aed1ec5cd77c413061ce3fa60d 97 SMART SM00530 33 88 9.9E-11 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS07140 129ee0aed1ec5cd77c413061ce3fa60d 97 Gene3D G3DSA:1.10.260.40 29 86 7.4E-13 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08005 6c93f05aa2359e3fb560e68b692fb10d 155 PANTHER PTHR30009 5 152 1.5E-33 T 21-04-2016 APL_RS08005 6c93f05aa2359e3fb560e68b692fb10d 155 PANTHER PTHR30009:SF7 5 152 1.5E-33 T 21-04-2016 APL_RS08005 6c93f05aa2359e3fb560e68b692fb10d 155 Pfam PF03918 Cytochrome C biogenesis protein 8 150 1.1E-50 T 21-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APL_RS04195 23ce1f28bd4d89158ed5c9656711d7ff 92 Pfam PF04977 Septum formation initiator 11 89 5.9E-24 T 21-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APL_RS04195 23ce1f28bd4d89158ed5c9656711d7ff 92 PANTHER PTHR37485 2 89 2.1E-31 T 21-04-2016 APL_RS04195 23ce1f28bd4d89158ed5c9656711d7ff 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.921 T 21-04-2016 IPR023081 Cell division protein FtsB APL_RS04195 23ce1f28bd4d89158ed5c9656711d7ff 92 PANTHER PTHR37485:SF1 2 89 2.1E-31 T 21-04-2016 APL_RS04830 9997e71ddec27efddb408865e821002b 113 SUPERFAMILY SSF54292 5 108 4.26E-30 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS04830 9997e71ddec27efddb408865e821002b 113 Gene3D G3DSA:3.10.20.30 1 101 5.2E-35 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS04830 9997e71ddec27efddb408865e821002b 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 4.8E-14 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS04830 9997e71ddec27efddb408865e821002b 113 PANTHER PTHR23426 7 111 2.4E-39 T 21-04-2016 APL_RS04830 9997e71ddec27efddb408865e821002b 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.3E-61 T 21-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 APL_RS04830 9997e71ddec27efddb408865e821002b 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 21-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 APL_RS04830 9997e71ddec27efddb408865e821002b 113 PRINTS PR00355 Adrenodoxin signature 83 91 2.6E-11 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APL_RS04830 9997e71ddec27efddb408865e821002b 113 PRINTS PR00355 Adrenodoxin signature 42 52 2.6E-11 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APL_RS04830 9997e71ddec27efddb408865e821002b 113 PRINTS PR00355 Adrenodoxin signature 60 74 2.6E-11 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APL_RS04970 ee80837762502dd36f78ab4c9a628653 112 SUPERFAMILY SSF47413 1 66 3.1E-14 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS04970 ee80837762502dd36f78ab4c9a628653 112 Pfam PF01381 Helix-turn-helix 7 61 2.0E-11 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS04970 ee80837762502dd36f78ab4c9a628653 112 Gene3D G3DSA:1.10.260.40 1 65 3.8E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS04970 ee80837762502dd36f78ab4c9a628653 112 SMART SM00530 6 61 2.4E-11 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 Pfam PF02504 Fatty acid synthesis protein 5 329 1.0E-94 T 21-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 SUPERFAMILY SSF53659 4 342 1.23E-95 T 21-04-2016 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 Gene3D G3DSA:3.40.718.10 3 340 7.1E-115 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 122.034 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 PIRSF PIRSF002465 2 344 1.9E-113 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 341 1.7E-98 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 PANTHER PTHR30100:SF1 2 344 4.9E-114 T 21-04-2016 APL_RS07325 1219fd99985be7299f89298991ea7fc7 344 PANTHER PTHR30100 2 344 4.9E-114 T 21-04-2016 APL_RS06060 9d17a8a828f879e87bad7f10b0e34d4d 187 SUPERFAMILY SSF56925 33 185 1.1E-28 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS06060 9d17a8a828f879e87bad7f10b0e34d4d 187 Pfam PF01298 Transferrin binding protein-like solute binding protein 6 186 6.0E-27 T 21-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 APL_RS10310 b0d02d1d64e88aee9b3f7d30ee7c3ff2 139 Pfam PF06146 Phosphate-starvation-inducible E 63 126 8.8E-15 T 21-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like APL_RS10310 b0d02d1d64e88aee9b3f7d30ee7c3ff2 139 PANTHER PTHR37819:SF1 6 137 1.7E-30 T 21-04-2016 APL_RS10310 b0d02d1d64e88aee9b3f7d30ee7c3ff2 139 PANTHER PTHR37819 6 137 1.7E-30 T 21-04-2016 APL_RS10310 b0d02d1d64e88aee9b3f7d30ee7c3ff2 139 PIRSF PIRSF029598 7 139 2.1E-39 T 21-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APL_RS02120 91f944c1ce43b4afa7899bf5627af6ca 289 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 246 272 - T 21-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APL_RS02120 91f944c1ce43b4afa7899bf5627af6ca 289 Pfam PF01148 Cytidylyltransferase family 3 286 6.0E-68 T 21-04-2016 APL_RS02120 91f944c1ce43b4afa7899bf5627af6ca 289 PANTHER PTHR13773 1 287 3.7E-74 T 21-04-2016 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 74.527 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 21-04-2016 IPR020081 SsrA-binding protein, conserved site APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 SUPERFAMILY SSF74982 7 136 9.55E-51 T 21-04-2016 IPR023620 Small protein B APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 PANTHER PTHR30308:SF2 1 159 5.8E-84 T 21-04-2016 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 Gene3D G3DSA:2.40.280.10 11 131 3.5E-50 T 21-04-2016 IPR023620 Small protein B APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 Pfam PF01668 SmpB protein 11 74 9.5E-29 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 5.5E-55 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 7.0E-54 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 APL_RS04530 b4dfce37b66360aef0c8003b6cd1474e 159 PANTHER PTHR30308 1 159 5.8E-84 T 21-04-2016 APL_RS06140 6cbb022129952f6218f9991aba00e3f1 230 PANTHER PTHR36122:SF2 19 226 2.9E-81 T 21-04-2016 APL_RS06140 6cbb022129952f6218f9991aba00e3f1 230 PANTHER PTHR36122 19 226 2.9E-81 T 21-04-2016 APL_RS06140 6cbb022129952f6218f9991aba00e3f1 230 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 42 226 2.6E-55 T 21-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APL_RS06140 6cbb022129952f6218f9991aba00e3f1 230 Pfam PF04973 Nicotinamide mononucleotide transporter 42 222 9.6E-39 T 21-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 Pfam PF00288 GHMP kinases N terminal domain 88 144 4.8E-8 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 Gene3D G3DSA:3.30.70.890 163 278 1.3E-39 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS04060 933f3b85a15a002cce828d65c2134945 285 SUPERFAMILY SSF54211 5 156 1.21E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APL_RS04060 933f3b85a15a002cce828d65c2134945 285 Pfam PF08544 GHMP kinases C terminal 194 253 7.9E-7 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS04060 933f3b85a15a002cce828d65c2134945 285 PANTHER PTHR20861 3 277 7.0E-92 T 21-04-2016 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 Gene3D G3DSA:3.30.230.10 6 158 5.2E-53 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APL_RS04060 933f3b85a15a002cce828d65c2134945 285 SUPERFAMILY SSF55060 161 278 4.22E-35 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain APL_RS04060 933f3b85a15a002cce828d65c2134945 285 PANTHER PTHR20861:SF2 3 277 7.0E-92 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 PIRSF PIRSF010376 3 279 4.0E-86 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 2.2E-105 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS04060 933f3b85a15a002cce828d65c2134945 285 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 271 31.469 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 SUPERFAMILY SSF54001 119 242 1.77E-14 T 21-04-2016 APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 79 2.6E-8 T 21-04-2016 IPR028090 JAB domain, prokaryotic APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 SUPERFAMILY SSF102712 1 105 5.23E-14 T 21-04-2016 APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 Gene3D G3DSA:3.40.140.10 1 129 6.9E-13 T 21-04-2016 APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 PANTHER PTHR34858:SF1 1 241 7.0E-40 T 21-04-2016 APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 Pfam PF00877 NlpC/P60 family 128 235 2.7E-14 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 Gene3D G3DSA:3.90.1720.10 130 245 7.1E-13 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS02745 13451309945d88e0f9a6fe729c5b8f92 257 PANTHER PTHR34858 1 241 7.0E-40 T 21-04-2016 APL_RS04470 161175a07205b2eea947e4130cd4406d 293 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 288 3.0E-98 T 21-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APL_RS04470 161175a07205b2eea947e4130cd4406d 293 Gene3D G3DSA:3.20.20.220 18 292 1.9E-102 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like APL_RS04470 161175a07205b2eea947e4130cd4406d 293 SUPERFAMILY SSF51730 20 292 7.26E-91 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like APL_RS04470 161175a07205b2eea947e4130cd4406d 293 Pfam PF02219 Methylenetetrahydrofolate reductase 16 289 3.7E-104 T 21-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APL_RS04470 161175a07205b2eea947e4130cd4406d 293 PANTHER PTHR21091 147 233 2.9E-41 T 21-04-2016 APL_RS07705 37aa4ae069978c6c5bb2ae899f5f85c3 338 Pfam PF06250 Protein of unknown function (DUF1016) 9 323 7.7E-114 T 21-04-2016 IPR009362 Protein of unknown function DUF1016 APL_RS07705 37aa4ae069978c6c5bb2ae899f5f85c3 338 PANTHER PTHR30547 4 335 1.5E-131 T 21-04-2016 APL_RS07705 37aa4ae069978c6c5bb2ae899f5f85c3 338 PANTHER PTHR30547:SF5 4 335 1.5E-131 T 21-04-2016 APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 PANTHER PTHR17630 34 380 6.1E-73 T 21-04-2016 APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 Gene3D G3DSA:3.40.50.1820 62 380 2.4E-71 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 71 200 2.6E-7 T 21-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 PANTHER PTHR17630:SF49 34 380 6.1E-73 T 21-04-2016 APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 SUPERFAMILY SSF53474 28 202 2.48E-48 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 SUPERFAMILY SSF53474 307 380 2.48E-48 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04740 ee0a75a8c917989e1c3c63465b7ba836 380 SUPERFAMILY SSF53474 240 245 2.48E-48 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS09300 f86981c3d949bf5b6728dbb2b3c7e081 367 SUPERFAMILY SSF56925 197 359 2.82E-8 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS09300 f86981c3d949bf5b6728dbb2b3c7e081 367 Pfam PF01298 Transferrin binding protein-like solute binding protein 193 360 9.8E-26 T 21-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 APL_RS03210 4bcd96b84a8f797d6ffb0f0a2c485f43 260 Pfam PF13276 HTH-like domain 23 76 1.5E-16 T 21-04-2016 IPR025948 HTH-like domain APL_RS03210 4bcd96b84a8f797d6ffb0f0a2c485f43 260 PANTHER PTHR32552 1 260 2.5E-73 T 21-04-2016 APL_RS03210 4bcd96b84a8f797d6ffb0f0a2c485f43 260 SUPERFAMILY SSF53098 94 253 3.03E-34 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03210 4bcd96b84a8f797d6ffb0f0a2c485f43 260 Gene3D G3DSA:3.30.420.10 93 251 3.6E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS03210 4bcd96b84a8f797d6ffb0f0a2c485f43 260 Pfam PF00665 Integrase core domain 99 214 2.1E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 SUPERFAMILY SSF48317 143 234 1.3E-24 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 SUPERFAMILY SSF48317 14 113 1.3E-24 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 PANTHER PTHR14969:SF22 7 123 4.5E-41 T 21-04-2016 APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 PANTHER PTHR14969:SF22 155 242 4.5E-41 T 21-04-2016 APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 SMART SM00014 78 228 6.7E-17 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 Gene3D G3DSA:1.20.144.10 40 227 4.3E-24 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 Pfam PF01569 PAP2 superfamily 83 231 3.8E-26 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 PANTHER PTHR14969 7 123 4.5E-41 T 21-04-2016 APL_RS02140 a4d4550c2a209c93785e7a4e7a6d57c7 245 PANTHER PTHR14969 155 242 4.5E-41 T 21-04-2016 APL_RS01520 9bf8f12fd6624cd1ae5af6aabae3aba4 110 ProDom PD065628 PM0975 PRECURSOR HI0310 SIGNAL 41 107 2.0E-26 T 21-04-2016 IPR020493 Uncharacterised protein family HI0310 APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 Gene3D G3DSA:3.40.50.1240 3 209 7.6E-55 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 PIRSF PIRSF000709 2 176 4.0E-19 T 21-04-2016 APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 SMART SM00855 4 162 2.4E-21 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 SUPERFAMILY SSF53254 2 209 1.26E-52 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 205 8.1E-49 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS01175 ad8193c77d8c49dfc5992dcefafe37bc 210 PANTHER PTHR23029 5 210 4.2E-39 T 21-04-2016 APL_RS00810 38e3c8fd2046a0bb583cb687b8e639f4 81 PANTHER PTHR40691 2 80 9.5E-25 T 21-04-2016 APL_RS00810 38e3c8fd2046a0bb583cb687b8e639f4 81 Pfam PF04400 Protein of unknown function (DUF539) 23 62 9.2E-19 T 21-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 SMART SM00739 4 31 9.4E-5 T 21-04-2016 IPR005824 KOW APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.0E-39 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 SUPERFAMILY SSF50104 4 102 1.44E-32 T 21-04-2016 IPR008991 Translation protein SH3-like domain APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 2.0E-22 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 Gene3D G3DSA:2.30.30.30 3 92 1.5E-21 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.285 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 21-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09415 5b41b832ffda7e5c8ad1a7c59a7e5fb4 103 Pfam PF00467 KOW motif 9 37 6.2E-6 T 21-04-2016 IPR005824 KOW APL_RS01850 711aa013689a0f731b90b3f74749ea87 198 Gene3D G3DSA:3.90.1720.10 83 198 7.3E-39 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS01850 711aa013689a0f731b90b3f74749ea87 198 SUPERFAMILY SSF54001 81 197 2.28E-36 T 21-04-2016 APL_RS01850 711aa013689a0f731b90b3f74749ea87 198 Pfam PF00877 NlpC/P60 family 95 196 1.6E-28 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS01850 711aa013689a0f731b90b3f74749ea87 198 PANTHER PTHR21666:SF210 90 198 3.3E-43 T 21-04-2016 APL_RS01850 711aa013689a0f731b90b3f74749ea87 198 PANTHER PTHR21666 90 198 3.3E-43 T 21-04-2016 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 783 799 0.3 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 812 827 0.029 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 747 764 0.03 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 765 782 0.016 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 830 845 0.28 T 21-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 SUPERFAMILY SSF51120 714 798 2.3E-23 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 SUPERFAMILY SSF51120 613 643 2.3E-23 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 753 771 - T 21-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 762 780 - T 21-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF02382 RTX N-terminal domain 9 652 0.0 T 21-04-2016 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Pfam PF08339 RTX C-terminal domain 869 1019 1.4E-48 T 21-04-2016 IPR013550 RTX, C-terminal APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 343 361 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 739 760 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 487 508 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 434 450 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 277 298 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 399 419 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 541 565 9.1E-81 T 21-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR00313 NodO calcium binding signature 812 820 2.2E-11 T 21-04-2016 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR00313 NodO calcium binding signature 839 848 2.2E-11 T 21-04-2016 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR00313 NodO calcium binding signature 793 801 2.2E-11 T 21-04-2016 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 PRINTS PR00313 NodO calcium binding signature 772 783 2.2E-11 T 21-04-2016 APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 SUPERFAMILY SSF51120 787 906 3.27E-17 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS07625 18506178815228c6fd6340c2d05b477d 1022 Gene3D G3DSA:2.150.10.10 720 935 3.9E-37 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APL_RS00580 03662cde0ca9e91357c90a3017349f56 183 Pfam PF03695 Uncharacterised protein family (UPF0149) 8 171 1.3E-27 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 APL_RS00580 03662cde0ca9e91357c90a3017349f56 183 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 8 161 1.2E-12 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 APL_RS00580 03662cde0ca9e91357c90a3017349f56 183 SUPERFAMILY SSF101327 7 170 3.92E-44 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 APL_RS00580 03662cde0ca9e91357c90a3017349f56 183 PANTHER PTHR37528 1 183 2.1E-29 T 21-04-2016 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 PANTHER PTHR11070 6 732 3.7E-246 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:1.10.10.160 118 194 1.4E-22 T 21-04-2016 IPR013986 DExx box DNA helicase domain APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 276 2.4E-81 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 730 0.0 T 21-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 PANTHER PTHR11070:SF7 6 732 3.7E-246 T 21-04-2016 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:3.40.50.300 556 645 3.7E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:3.40.50.300 290 391 3.7E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Pfam PF13361 UvrD-like helicase C-terminal domain 281 619 1.3E-86 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 SUPERFAMILY SSF52540 7 644 2.26E-176 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:1.10.486.10 392 545 4.3E-53 T 21-04-2016 APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:3.40.50.300 195 289 1.4E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06955 2d123609ec7306e433e6b71f97802117 732 Gene3D G3DSA:3.40.50.300 6 114 1.4E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Pfam PF00005 ABC transporter 792 859 5.1E-5 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 SUPERFAMILY SSF52540 1 204 1.43E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 SUPERFAMILY SSF52540 434 568 1.43E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:1.20.1580.10 406 476 1.6E-52 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:1.20.1580.10 91 129 1.6E-52 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:1.20.1580.10 251 284 1.6E-52 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 SUPERFAMILY SSF52540 611 910 8.67E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:1.20.1580.10 693 819 7.1E-54 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.30.1490.20 130 153 8.6E-26 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.30.1490.20 200 248 8.6E-26 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 PANTHER PTHR32282 1 939 0.0 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.40.50.300 477 598 3.6E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.40.50.300 4 51 3.6E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.40.50.300 820 937 1.7E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:3.40.50.300 608 691 1.7E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 PANTHER PTHR32282:SF2 1 939 0.0 T 21-04-2016 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.827 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APL_RS04095 f35fafc03334dfd6ba2797e873cedf1c 942 Gene3D G3DSA:1.10.8.280 286 405 4.2E-43 T 21-04-2016 APL_RS07750 aeeae8cc5d11870ba93da9d77a511648 307 SUPERFAMILY SSF53448 7 286 2.6E-42 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS07750 aeeae8cc5d11870ba93da9d77a511648 307 Gene3D G3DSA:3.90.550.10 10 221 2.9E-33 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS07750 aeeae8cc5d11870ba93da9d77a511648 307 PANTHER PTHR22916 4 221 3.0E-33 T 21-04-2016 APL_RS07750 aeeae8cc5d11870ba93da9d77a511648 307 PANTHER PTHR22916:SF29 4 221 3.0E-33 T 21-04-2016 APL_RS07750 aeeae8cc5d11870ba93da9d77a511648 307 Pfam PF00535 Glycosyl transferase family 2 8 138 1.2E-24 T 21-04-2016 IPR001173 Glycosyltransferase 2-like APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 SUPERFAMILY SSF51316 6 126 4.45E-52 T 21-04-2016 IPR011057 Mss4-like APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 PANTHER PTHR10173:SF18 7 128 1.7E-50 T 21-04-2016 APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 129 1.0E-47 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 Gene3D G3DSA:2.170.150.20 6 126 2.1E-52 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 Pfam PF01641 SelR domain 7 121 2.3E-46 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APL_RS02230 631eab69d7b056de4c737bc5bc282a74 131 PANTHER PTHR10173 7 128 1.7E-50 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 4.1E-123 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 Pfam PF01266 FAD dependent oxidoreductase 5 40 1.0E-7 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PANTHER PTHR13789 5 388 3.5E-185 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 Pfam PF01494 FAD binding domain 150 337 1.8E-22 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.1E-19 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.1E-19 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.1E-19 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.1E-19 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 Gene3D G3DSA:3.50.50.60 265 353 1.7E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 Gene3D G3DSA:3.50.50.60 5 180 1.7E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 PANTHER PTHR13789:SF233 5 388 3.5E-185 T 21-04-2016 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 SUPERFAMILY SSF51905 5 175 3.89E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS09280 1f69ed43a5527572e27b52c13146316a 388 SUPERFAMILY SSF51905 264 380 3.89E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 SUPERFAMILY SSF51366 19 268 1.22E-69 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 Gene3D G3DSA:3.20.20.70 193 279 6.4E-52 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 Gene3D G3DSA:3.20.20.70 25 161 6.4E-52 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 3.6E-151 T 21-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 PANTHER PTHR31829 6 295 3.8E-212 T 21-04-2016 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 Pfam PF01680 SOR/SNZ family 9 213 3.7E-104 T 21-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.391 T 21-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 PIRSF PIRSF029271 1 295 2.6E-149 T 21-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS03005 b8dd379f1b830d1b93e24217feb44666 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 21-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 SUPERFAMILY SSF46689 7 80 1.8E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 PANTHER PTHR30055 1 201 3.1E-92 T 21-04-2016 APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 Gene3D G3DSA:1.10.357.10 7 197 3.5E-35 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 PANTHER PTHR30055:SF39 1 201 3.1E-92 T 21-04-2016 APL_RS07805 894818e77a8d38c53297dd9ced3aa3b5 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 3.9E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 SUPERFAMILY SSF89550 6 262 1.33E-8 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Gene3D G3DSA:3.20.20.140 6 257 7.2E-15 T 21-04-2016 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1029 0.0 T 21-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Pfam PF14579 Helix-hairpin-helix motif 807 896 4.4E-25 T 21-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 733 1.2E-174 T 21-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 PANTHER PTHR32294 2 1158 0.0 T 21-04-2016 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 PANTHER PTHR32294:SF0 2 1158 0.0 T 21-04-2016 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Gene3D G3DSA:2.40.50.140 980 1074 1.1E-10 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Pfam PF01336 OB-fold nucleic acid binding domain 992 1068 9.5E-7 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Pfam PF02811 PHP domain 8 168 1.2E-37 T 21-04-2016 IPR004013 PHP domain GO:0003824 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 SMART SM00481 7 74 6.6E-21 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APL_RS05765 e13698c86e1cda9a57036f858f44948c 1158 Gene3D G3DSA:1.10.150.280 833 879 7.8E-7 T 21-04-2016 APL_RS00030 2c75964dda9e5760f3134f958fb1fb8a 376 Pfam PF13609 Gram-negative porin 4 332 1.9E-23 T 21-04-2016 APL_RS00030 2c75964dda9e5760f3134f958fb1fb8a 376 SUPERFAMILY SSF56935 29 375 8.24E-38 T 21-04-2016 APL_RS00030 2c75964dda9e5760f3134f958fb1fb8a 376 Gene3D G3DSA:2.40.160.10 30 376 1.9E-44 T 21-04-2016 IPR023614 Porin domain APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 Gene3D G3DSA:3.40.50.20 4 117 1.7E-17 T 21-04-2016 IPR016185 Pre-ATP-grasp domain APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 299 7.3E-82 T 21-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 Pfam PF08443 RimK-like ATP-grasp domain 112 299 3.3E-59 T 21-04-2016 IPR013651 ATP-grasp fold, RimK-type APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 PANTHER PTHR21621 1 301 2.5E-88 T 21-04-2016 APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 SUPERFAMILY SSF56059 104 301 6.72E-43 T 21-04-2016 APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 PANTHER PTHR21621:SF0 1 301 2.5E-88 T 21-04-2016 APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 Gene3D G3DSA:3.30.1490.20 118 187 4.8E-8 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APL_RS02490 81e0eb53de0b6422577679b2cfddef31 304 Gene3D G3DSA:3.30.470.20 188 291 5.3E-33 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS04480 82d86699b6c7e46fe12f25fc4961630d 409 PANTHER PTHR35334 11 409 2.0E-202 T 21-04-2016 APL_RS04480 82d86699b6c7e46fe12f25fc4961630d 409 PANTHER PTHR35334:SF2 11 409 2.0E-202 T 21-04-2016 APL_RS04480 82d86699b6c7e46fe12f25fc4961630d 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 375 2.5E-16 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APL_RS04480 82d86699b6c7e46fe12f25fc4961630d 409 TIGRFAM TIGR00814 stp: serine transporter 7 398 5.8E-159 T 21-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 APL_RS05835 7af4f55fa7fb083bd5e4a19bacf2f4bf 100 PANTHER PTHR10730:SF27 2 94 5.3E-13 T 21-04-2016 APL_RS05835 7af4f55fa7fb083bd5e4a19bacf2f4bf 100 PANTHER PTHR10730 2 94 5.3E-13 T 21-04-2016 APL_RS05835 7af4f55fa7fb083bd5e4a19bacf2f4bf 100 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 7 99 8.2E-28 T 21-04-2016 IPR002654 Glycosyl transferase, family 25 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 7.4E-30 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 SUPERFAMILY SSF55174 3 208 2.62E-71 T 21-04-2016 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 PANTHER PTHR11831 1 208 1.5E-92 T 21-04-2016 IPR022801 Ribosomal protein S4/S9 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 3.3E-86 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 SMART SM01390 3 97 3.8E-47 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 PANTHER PTHR11831:SF4 1 208 1.5E-92 T 21-04-2016 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 Gene3D G3DSA:1.10.1050.10 1 103 7.8E-43 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.482 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 Gene3D G3DSA:3.10.290.10 104 192 6.6E-34 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 Pfam PF01479 S4 domain 99 145 2.6E-18 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 SMART SM00363 98 162 1.3E-18 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APL_RS09480 8eaeb57bebc2eea568b51d7228b6ea7a 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 21-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APL_RS03090 24c7adb1c5ccfad992b74b8cca68ab28 105 SUPERFAMILY SSF161219 5 90 9.42E-18 T 21-04-2016 APL_RS03090 24c7adb1c5ccfad992b74b8cca68ab28 105 PANTHER PTHR28082:SF1 17 104 2.4E-34 T 21-04-2016 APL_RS03090 24c7adb1c5ccfad992b74b8cca68ab28 105 Pfam PF05495 CHY zinc finger 15 88 5.8E-13 T 21-04-2016 IPR008913 Zinc finger, CHY-type GO:0008270 APL_RS03090 24c7adb1c5ccfad992b74b8cca68ab28 105 PANTHER PTHR28082 17 104 2.4E-34 T 21-04-2016 APL_RS03090 24c7adb1c5ccfad992b74b8cca68ab28 105 PIRSF PIRSF017292 1 105 3.4E-44 T 21-04-2016 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type APL_RS10555 d8e5aaadd26456c09bb32ebebd574ea2 428 PANTHER PTHR30588 1 428 1.0E-153 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APL_RS10555 d8e5aaadd26456c09bb32ebebd574ea2 428 PANTHER PTHR30588:SF0 1 428 1.0E-153 T 21-04-2016 APL_RS10555 d8e5aaadd26456c09bb32ebebd574ea2 428 Pfam PF05525 Branched-chain amino acid transport protein 2 423 1.9E-142 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APL_RS10555 d8e5aaadd26456c09bb32ebebd574ea2 428 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 409 1.3E-126 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APL_RS04015 a36b0b52474241285cbaca7a2cf2055c 99 Pfam PF14131 Domain of unknown function (DUF4298) 5 90 6.0E-22 T 21-04-2016 IPR025384 Protein of unknown function DUF4298 APL_RS05640 d86694ce3ca5da7d9ae42473e1ce4e39 297 PANTHER PTHR11103:SF7 3 296 2.6E-42 T 21-04-2016 APL_RS05640 d86694ce3ca5da7d9ae42473e1ce4e39 297 Pfam PF02574 Homocysteine S-methyltransferase 5 295 1.0E-50 T 21-04-2016 IPR003726 Homocysteine-binding domain APL_RS05640 d86694ce3ca5da7d9ae42473e1ce4e39 297 Gene3D G3DSA:3.20.20.330 3 297 9.1E-68 T 21-04-2016 IPR003726 Homocysteine-binding domain APL_RS05640 d86694ce3ca5da7d9ae42473e1ce4e39 297 SUPERFAMILY SSF82282 3 297 7.72E-71 T 21-04-2016 IPR003726 Homocysteine-binding domain APL_RS05640 d86694ce3ca5da7d9ae42473e1ce4e39 297 PANTHER PTHR11103 3 296 2.6E-42 T 21-04-2016 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 114 2.0E-44 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 114 25.513 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 Pfam PF02313 Fumarate reductase subunit D 6 112 1.6E-41 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 SUPERFAMILY SSF81343 1 114 6.32E-48 T 21-04-2016 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 Gene3D G3DSA:1.20.1300.10 1 113 1.3E-43 T 21-04-2016 APL_RS08065 47cf382f6a35de7b0d85e7493ef068c2 114 PIRSF PIRSF000179 1 114 2.5E-47 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 Pfam PF04348 LppC putative lipoprotein 41 576 3.2E-163 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 4 576 28.361 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 PANTHER PTHR38038 1 582 2.6E-135 T 21-04-2016 APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 SUPERFAMILY SSF53822 267 578 2.83E-77 T 21-04-2016 IPR028082 Periplasmic binding protein-like I APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 PANTHER PTHR38038:SF1 1 582 2.6E-135 T 21-04-2016 APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 Gene3D G3DSA:3.40.50.2300 368 505 6.5E-41 T 21-04-2016 APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 Gene3D G3DSA:3.40.50.2300 506 569 3.2E-58 T 21-04-2016 APL_RS07165 7a6fedc48e86a395c3888bb4c9974882 582 Gene3D G3DSA:3.40.50.2300 266 367 3.2E-58 T 21-04-2016 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 PIRSF PIRSF000847 1 182 1.0E-43 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 72 2.7E-17 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 PANTHER PTHR14269:SF13 3 176 1.8E-81 T 21-04-2016 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 181 7.3E-57 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APL_RS01425 2ec2f1d9e56845b70d68f368bccb0fad 183 PANTHER PTHR14269 3 176 1.8E-81 T 21-04-2016 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 PANTHER PTHR10093 1 127 1.1E-95 T 21-04-2016 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 Pfam PF01592 NifU-like N terminal domain 2 126 5.4E-56 T 21-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 PANTHER PTHR10093:SF3 1 127 1.1E-95 T 21-04-2016 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 7.2E-68 T 21-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 Gene3D G3DSA:3.90.1010.10 2 126 8.5E-54 T 21-04-2016 APL_RS04860 08f014a0ff932b6c8b1d2120fa79680f 127 SUPERFAMILY SSF82649 1 125 4.71E-47 T 21-04-2016 APL_RS05255 122832bfc2f92fe0271aea8396acd04f 437 Pfam PF00999 Sodium/hydrogen exchanger family 32 416 2.3E-50 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APL_RS05255 122832bfc2f92fe0271aea8396acd04f 437 PANTHER PTHR10110:SF86 7 417 6.9E-89 T 21-04-2016 APL_RS05255 122832bfc2f92fe0271aea8396acd04f 437 PANTHER PTHR10110 7 417 6.9E-89 T 21-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APL_RS07555 e91d84e18175cf396439f7118881453e 89 Pfam PF03927 NapD protein 12 88 1.1E-22 T 21-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly APL_RS07555 e91d84e18175cf396439f7118881453e 89 PANTHER PTHR38603 1 89 5.5E-21 T 21-04-2016 APL_RS03730 6a100b8ed97992cc1fb6416c396eecb1 313 PANTHER PTHR30472 13 313 1.1E-95 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS03730 6a100b8ed97992cc1fb6416c396eecb1 313 Gene3D G3DSA:1.10.3470.10 7 313 1.0E-51 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS03730 6a100b8ed97992cc1fb6416c396eecb1 313 Pfam PF01032 FecCD transport family 25 310 2.6E-49 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APL_RS03730 6a100b8ed97992cc1fb6416c396eecb1 313 SUPERFAMILY SSF81345 6 310 2.48E-51 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS03730 6a100b8ed97992cc1fb6416c396eecb1 313 PANTHER PTHR30472:SF19 13 313 1.1E-95 T 21-04-2016 APL_RS08075 088e3877043c8b30b648249134681b4a 244 SUPERFAMILY SSF54292 6 106 3.53E-32 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APL_RS08075 088e3877043c8b30b648249134681b4a 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 228 5.4E-98 T 21-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APL_RS08075 088e3877043c8b30b648249134681b4a 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APL_RS08075 088e3877043c8b30b648249134681b4a 244 SUPERFAMILY SSF46548 108 227 5.23E-28 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APL_RS08075 088e3877043c8b30b648249134681b4a 244 Gene3D G3DSA:3.10.20.30 5 106 1.3E-37 T 21-04-2016 IPR012675 Beta-grasp domain APL_RS08075 088e3877043c8b30b648249134681b4a 244 Gene3D G3DSA:1.10.1060.10 107 231 3.0E-35 T 21-04-2016 APL_RS08075 088e3877043c8b30b648249134681b4a 244 PANTHER PTHR11921 7 228 4.1E-98 T 21-04-2016 APL_RS08075 088e3877043c8b30b648249134681b4a 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 9.9E-35 T 21-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APL_RS08075 088e3877043c8b30b648249134681b4a 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APL_RS08075 088e3877043c8b30b648249134681b4a 244 Pfam PF13183 4Fe-4S dicluster domain 145 218 4.9E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 Gene3D G3DSA:3.40.50.1580 11 233 1.1E-81 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 SUPERFAMILY SSF53167 3 235 3.4E-92 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 PANTHER PTHR21234:SF8 3 235 2.3E-78 T 21-04-2016 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.639 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.7E-122 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 Pfam PF01048 Phosphorylase superfamily 15 217 3.7E-39 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS05305 1981b69ea6ebc333bf108f47e6e9bcbd 240 PANTHER PTHR21234 3 235 2.3E-78 T 21-04-2016 IPR018017 Nucleoside phosphorylase APL_RS00505 94fe7c7fbc1e64473f1ae8d7c355f58a 276 PANTHER PTHR11040:SF33 1 276 1.7E-105 T 21-04-2016 APL_RS00505 94fe7c7fbc1e64473f1ae8d7c355f58a 276 PANTHER PTHR11040 1 276 1.7E-105 T 21-04-2016 APL_RS00505 94fe7c7fbc1e64473f1ae8d7c355f58a 276 Pfam PF02535 ZIP Zinc transporter 124 271 1.6E-15 T 21-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APL_RS05485 ed380b427bff79003db2a09831cd3d77 144 PANTHER PTHR30009:SF6 10 125 2.8E-53 T 21-04-2016 APL_RS05485 ed380b427bff79003db2a09831cd3d77 144 PANTHER PTHR30009 10 125 2.8E-53 T 21-04-2016 APL_RS05485 ed380b427bff79003db2a09831cd3d77 144 Pfam PF03918 Cytochrome C biogenesis protein 12 138 1.8E-42 T 21-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APL_RS05485 ed380b427bff79003db2a09831cd3d77 144 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 8 129 6.8E-55 T 21-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 SMART SM01234 20 87 2.6E-45 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 PANTHER PTHR33383 18 89 5.6E-41 T 21-04-2016 APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 27 97 2.5E-29 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 20 88 24.658 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 Pfam PF01809 Haemolytic domain 22 87 9.9E-30 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APL_RS10290 171308bf44d8b8770a4121af9708a52a 100 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 35 87 3.0E-18 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APL_RS05045 2f51e0ce8008e9788755c4bad2b72f3d 778 Pfam PF04453 Organic solvent tolerance protein 298 684 5.9E-106 T 21-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APL_RS05045 2f51e0ce8008e9788755c4bad2b72f3d 778 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 755 19.478 T 21-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 APL_RS05045 2f51e0ce8008e9788755c4bad2b72f3d 778 PANTHER PTHR30189 48 778 1.5E-88 T 21-04-2016 APL_RS05045 2f51e0ce8008e9788755c4bad2b72f3d 778 Gene3D G3DSA:2.60.450.10 48 201 2.9E-20 T 21-04-2016 APL_RS05045 2f51e0ce8008e9788755c4bad2b72f3d 778 Pfam PF03968 OstA-like protein 51 186 3.8E-24 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 SUPERFAMILY SSF56935 12 175 1.36E-14 T 21-04-2016 APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 PANTHER PTHR32552 32 175 7.6E-20 T 21-04-2016 APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 158 175 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 PANTHER PTHR32552:SF18 32 175 7.6E-20 T 21-04-2016 APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 Gene3D G3DSA:2.40.170.20 13 175 4.0E-27 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS10850 4615c420668fffc13ee7fff8e107e539 175 Pfam PF00593 TonB dependent receptor 17 173 2.6E-10 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 Pfam PF07690 Major Facilitator Superfamily 46 400 7.6E-36 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 PANTHER PTHR11360:SF135 13 450 2.5E-137 T 21-04-2016 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 Gene3D G3DSA:1.20.1250.20 244 447 4.7E-16 T 21-04-2016 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 Gene3D G3DSA:1.20.1250.20 30 219 1.3E-18 T 21-04-2016 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 PANTHER PTHR11360 13 450 2.5E-137 T 21-04-2016 APL_RS04695 01dd92b41dcb00d98a212b74a2e8e51b 512 SUPERFAMILY SSF103473 13 443 2.49E-51 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS06335 d00c0712632e95cb84e83f7f1d0c18aa 316 Pfam PF03595 Voltage-dependent anion channel 9 305 1.2E-29 T 21-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 APL_RS06335 d00c0712632e95cb84e83f7f1d0c18aa 316 PANTHER PTHR37955 1 316 2.1E-54 T 21-04-2016 APL_RS06335 d00c0712632e95cb84e83f7f1d0c18aa 316 PANTHER PTHR37955:SF1 1 316 2.1E-54 T 21-04-2016 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 SUPERFAMILY SSF48019 243 359 2.13E-33 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 351 8.9E-136 T 21-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 356 1.9E-30 T 21-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 SMART SM00382 37 178 1.9E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Gene3D G3DSA:3.40.50.300 15 166 2.4E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 PANTHER PTHR11669 1 406 4.2E-174 T 21-04-2016 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 542 680 1.3E-44 T 21-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Gene3D G3DSA:1.10.8.60 167 242 1.0E-28 T 21-04-2016 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 SUPERFAMILY SSF52540 34 222 1.24E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.0E-44 T 21-04-2016 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 Gene3D G3DSA:1.20.272.10 243 357 9.4E-43 T 21-04-2016 APL_RS01375 505d3d87614a5f63e44f8f10d254e951 688 PANTHER PTHR11669:SF0 1 406 4.2E-174 T 21-04-2016 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 Gene3D G3DSA:3.30.470.10 4 161 3.1E-66 T 21-04-2016 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 31 344 1.3E-144 T 21-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 PANTHER PTHR11825 3 343 1.6E-151 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 Pfam PF01063 Amino-transferase class IV 56 298 2.7E-37 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 SUPERFAMILY SSF56752 4 341 9.42E-99 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 PIRSF PIRSF006468 1 345 1.5E-119 T 21-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 ProSitePatterns PS00770 Aminotransferases class-IV signature. 225 254 - T 21-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 PANTHER PTHR11825:SF2 3 343 1.6E-151 T 21-04-2016 APL_RS00385 115e7d487a75b3e662f0a2dbc91ca72e 345 Gene3D G3DSA:3.20.10.10 162 330 3.2E-53 T 21-04-2016 APL_RS08915 4994d9c5fd35fb8850520ea546865d1a 109 Pfam PF01381 Helix-turn-helix 42 93 8.4E-7 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APL_RS08915 4994d9c5fd35fb8850520ea546865d1a 109 Gene3D G3DSA:1.10.260.40 39 94 1.2E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS08915 4994d9c5fd35fb8850520ea546865d1a 109 SUPERFAMILY SSF47413 39 94 2.17E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS05590 63c423e7c39272b01167453437a9460a 433 PANTHER PTHR11119:SF43 4 433 1.4E-258 T 21-04-2016 APL_RS05590 63c423e7c39272b01167453437a9460a 433 Pfam PF00860 Permease family 14 393 1.9E-84 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS05590 63c423e7c39272b01167453437a9460a 433 PANTHER PTHR11119 4 433 1.4E-258 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 489 23.127 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 4.9E-35 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 SUPERFAMILY SSF56317 217 480 1.31E-42 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 451 6.3E-97 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 PANTHER PTHR38686 1 502 5.3E-103 T 21-04-2016 APL_RS01910 c9879ae9d45b6cc5915db89895e7ec7a 503 Gene3D G3DSA:3.60.110.10 212 475 6.6E-26 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 7.2E-26 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 SUPERFAMILY SSF55594 1 81 3.27E-26 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.6E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 Gene3D G3DSA:3.30.1340.10 1 81 1.6E-31 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 PANTHER PTHR33705 1 81 1.3E-34 T 21-04-2016 APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.0E-19 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.0E-19 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.0E-19 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APL_RS06935 a9def898a0dffbe89048e7caf6b2416b 85 PANTHER PTHR33705:SF1 1 81 1.3E-34 T 21-04-2016 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 PANTHER PTHR33795 1 169 2.3E-51 T 21-04-2016 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 Gene3D G3DSA:1.10.10.60 62 155 2.2E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 SUPERFAMILY SSF46689 57 161 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 PANTHER PTHR33795:SF1 1 169 2.3E-51 T 21-04-2016 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 SUPERFAMILY SSF46689 1 52 2.87E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS01075 ec5d883e8c99b9a7754a325c1e437c08 169 Pfam PF13518 Helix-turn-helix domain 65 118 8.6E-12 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 323 6.8E-59 T 21-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 PANTHER PTHR30477 145 320 1.7E-68 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 PANTHER PTHR30477 7 106 1.7E-68 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 SUPERFAMILY SSF53807 20 325 5.1E-77 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 Gene3D G3DSA:3.40.50.1980 215 325 9.4E-29 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 PANTHER PTHR30477:SF1 145 320 1.7E-68 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 PANTHER PTHR30477:SF1 7 106 1.7E-68 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 Gene3D G3DSA:3.40.50.1980 137 198 5.1E-11 T 21-04-2016 APL_RS07605 c2d1a08cc53caa448e46c48089175518 325 Gene3D G3DSA:3.40.50.1980 6 136 3.2E-26 T 21-04-2016 APL_RS05160 9c071dad020a186f4265e15aeef3876d 111 Pfam PF13276 HTH-like domain 33 86 1.4E-16 T 21-04-2016 IPR025948 HTH-like domain APL_RS04790 9c071dad020a186f4265e15aeef3876d 111 Pfam PF13276 HTH-like domain 33 86 1.4E-16 T 21-04-2016 IPR025948 HTH-like domain APL_RS01565 88e4fb047411853e613ac7c630e62966 156 SUPERFAMILY SSF103088 53 155 2.75E-30 T 21-04-2016 IPR006665 OmpA-like domain APL_RS01565 88e4fb047411853e613ac7c630e62966 156 PANTHER PTHR30128:SF18 25 156 4.5E-42 T 21-04-2016 APL_RS01565 88e4fb047411853e613ac7c630e62966 156 Gene3D G3DSA:3.30.1330.60 55 155 1.1E-28 T 21-04-2016 IPR006665 OmpA-like domain APL_RS01565 88e4fb047411853e613ac7c630e62966 156 Pfam PF00691 OmpA family 58 150 7.8E-19 T 21-04-2016 IPR006665 OmpA-like domain APL_RS01565 88e4fb047411853e613ac7c630e62966 156 PRINTS PR01021 OMPA domain signature 103 119 2.88E-19 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS01565 88e4fb047411853e613ac7c630e62966 156 PRINTS PR01021 OMPA domain signature 88 103 2.88E-19 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS01565 88e4fb047411853e613ac7c630e62966 156 PRINTS PR01021 OMPA domain signature 59 81 2.88E-19 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APL_RS01565 88e4fb047411853e613ac7c630e62966 156 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 56 156 8.0E-39 T 21-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 APL_RS01565 88e4fb047411853e613ac7c630e62966 156 PANTHER PTHR30128 25 156 4.5E-42 T 21-04-2016 APL_RS03965 14ce679ffbd0b31da3140de0befd0d06 80 Pfam PF03889 Domain of unknown function 14 51 2.9E-21 T 21-04-2016 IPR005589 Protein of unknown function DUF331 APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.635 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 SMART SM00316 4 72 5.6E-5 T 21-04-2016 IPR022967 RNA-binding domain, S1 APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 PANTHER PTHR33370 1 72 1.1E-49 T 21-04-2016 APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 SUPERFAMILY SSF50249 1 70 2.94E-28 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 Gene3D G3DSA:2.40.50.140 1 71 8.9E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.0E-27 T 21-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APL_RS06410 f336f6f1515733031e266a1c5e1d6f4f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-37 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 26 373 73.957 T 21-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 SUPERFAMILY SSF102114 125 342 2.88E-14 T 21-04-2016 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 PANTHER PTHR30544 9 391 5.8E-201 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 23 378 8.7E-172 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 PIRSF PIRSF006004 19 386 6.5E-147 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 Gene3D G3DSA:3.20.20.70 126 333 2.6E-15 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 PANTHER PTHR30544:SF5 9 391 5.8E-201 T 21-04-2016 APL_RS06645 6c776bc20d7e81bd510a0da6a315a2df 393 Pfam PF04055 Radical SAM superfamily 129 298 4.8E-16 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 SUPERFAMILY SSF56784 6 266 7.46E-58 T 21-04-2016 IPR023214 HAD-like domain APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 21-04-2016 APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 11 263 3.0E-49 T 21-04-2016 IPR023214 HAD-like domain APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 PANTHER PTHR10000 9 269 2.6E-54 T 21-04-2016 APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 PANTHER PTHR10000:SF25 9 269 2.6E-54 T 21-04-2016 APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 236 1.9E-17 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 Gene3D G3DSA:3.40.50.1000 3 83 6.6E-48 T 21-04-2016 IPR023214 HAD-like domain APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 Gene3D G3DSA:3.40.50.1000 172 266 6.6E-48 T 21-04-2016 IPR023214 HAD-like domain APL_RS10615 acb58914ab2cba904e2050feedae5a06 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 10 263 3.4E-45 T 21-04-2016 IPR000150 Cof protein GO:0016787 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 7.3E-78 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 PANTHER PTHR30589:SF0 2 264 1.6E-112 T 21-04-2016 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 PANTHER PTHR30589 2 264 1.6E-112 T 21-04-2016 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 4.5E-92 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APL_RS10070 64ed42afc97f0091ac9a814346bfd23f 264 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 19.364 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APL_RS00140 37c2ac5f3874c9713eb2f832f54dfb70 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 309 3.0E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00140 37c2ac5f3874c9713eb2f832f54dfb70 315 PANTHER PTHR30465:SF0 1 310 1.4E-101 T 21-04-2016 APL_RS00140 37c2ac5f3874c9713eb2f832f54dfb70 315 PANTHER PTHR30465 1 310 1.4E-101 T 21-04-2016 APL_RS00140 37c2ac5f3874c9713eb2f832f54dfb70 315 Gene3D G3DSA:1.10.3720.10 93 306 6.0E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00140 37c2ac5f3874c9713eb2f832f54dfb70 315 SUPERFAMILY SSF161098 93 294 2.35E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 PANTHER PTHR30290 1 533 2.8E-212 T 21-04-2016 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 SUPERFAMILY SSF53850 25 529 8.69E-162 T 21-04-2016 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 Gene3D G3DSA:3.10.105.10 285 501 1.6E-71 T 21-04-2016 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 Gene3D G3DSA:3.90.76.10 35 215 1.9E-48 T 21-04-2016 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 PANTHER PTHR30290:SF14 1 533 2.8E-212 T 21-04-2016 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 75 97 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 PIRSF PIRSF002741 4 532 8.6E-129 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APL_RS00345 23e0a4446b4c8cda9f98589a1808c2a0 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 448 6.0E-111 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 SUPERFAMILY SSF48452 88 186 5.42E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 SUPERFAMILY SSF48452 333 363 5.42E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 Gene3D G3DSA:1.25.40.10 81 203 1.1E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 Gene3D G3DSA:1.25.40.10 265 383 1.1E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083:SF396 242 296 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083:SF396 333 389 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083:SF396 1 203 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083 242 296 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083 333 389 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 PANTHER PTHR23083 1 203 1.5E-16 T 21-04-2016 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 9.5E-115 T 21-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 APL_RS05270 8c524cc27a9f3a932257024e876815a1 416 Pfam PF07219 HemY protein N-terminus 26 131 1.8E-30 T 21-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 Gene3D G3DSA:3.40.1280.10 75 242 1.7E-58 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 Gene3D G3DSA:2.40.240.20 1 70 4.6E-24 T 21-04-2016 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 Pfam PF04452 RNA methyltransferase 20 238 2.4E-74 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 SUPERFAMILY SSF75217 75 243 1.83E-51 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.4E-87 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 SUPERFAMILY SSF88697 2 69 5.96E-17 T 21-04-2016 IPR015947 PUA-like domain APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 PANTHER PTHR30027 1 243 2.5E-95 T 21-04-2016 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 PIRSF PIRSF015601 2 243 4.0E-53 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APL_RS01190 247b0400829a1f71cfc3d0c65fcea074 243 PANTHER PTHR30027:SF3 1 243 2.5E-95 T 21-04-2016 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 100 4.7E-31 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 Gene3D G3DSA:3.30.920.10 1 97 3.6E-25 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 Pfam PF01491 Frataxin-like domain 1 95 9.7E-21 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 21-04-2016 IPR020895 Frataxin conserved site APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 SUPERFAMILY SSF55387 1 96 5.06E-29 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 SMART SM01219 1 100 7.6E-34 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 PANTHER PTHR16821 1 101 4.8E-21 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS05825 b0dd488c36bdf188117b49a569be0850 101 Hamap MF_00142 Protein CyaY [cyaY]. 1 101 23.522 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 PANTHER PTHR22769 1 112 1.7E-21 T 21-04-2016 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 Gene3D G3DSA:3.90.79.10 2 140 8.3E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 PANTHER PTHR22769:SF14 1 112 1.7E-21 T 21-04-2016 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 SUPERFAMILY SSF55811 4 119 8.39E-26 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS01695 dfb762c393d943d31a68a5d1471767e3 151 Pfam PF00293 NUDIX domain 9 114 3.3E-13 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS07375 0c1a5f600f70b74120494e00110758c7 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 1 151 1.0E-34 T 21-04-2016 IPR009328 Protein of unknown function DUF986 APL_RS07375 0c1a5f600f70b74120494e00110758c7 152 Pfam PF06173 Protein of unknown function (DUF986) 2 150 8.4E-57 T 21-04-2016 IPR009328 Protein of unknown function DUF986 APL_RS07375 0c1a5f600f70b74120494e00110758c7 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 151 23.035 T 21-04-2016 IPR009328 Protein of unknown function DUF986 APL_RS07375 0c1a5f600f70b74120494e00110758c7 152 PIRSF PIRSF020687 1 151 4.7E-53 T 21-04-2016 IPR009328 Protein of unknown function DUF986 APL_RS01355 0d42dc9544402d0e82a335c937697288 229 PANTHER PTHR30183 1 228 7.6E-80 T 21-04-2016 APL_RS01355 0d42dc9544402d0e82a335c937697288 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 222 3.3E-70 T 21-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 APL_RS01355 0d42dc9544402d0e82a335c937697288 229 Gene3D G3DSA:1.10.3720.10 7 225 7.2E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01355 0d42dc9544402d0e82a335c937697288 229 SUPERFAMILY SSF161098 5 216 3.01E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01355 0d42dc9544402d0e82a335c937697288 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 214 8.5E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.6E-44 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 Gene3D G3DSA:3.30.420.100 23 117 1.2E-35 T 21-04-2016 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 SUPERFAMILY SSF53137 3 115 4.58E-51 T 21-04-2016 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 PANTHER PTHR12899 1 117 3.7E-44 T 21-04-2016 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.8E-42 T 21-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09440 3e4e4b204f376c6854b320e5255be4cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.213 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS03695 0002368823029c03f7d35b6882c5ebbd 111 PIRSF PIRSF028773 1 111 2.2E-49 T 21-04-2016 IPR007458 Protein of unknown function DUF496 APL_RS03695 0002368823029c03f7d35b6882c5ebbd 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.604 T 21-04-2016 IPR007458 Protein of unknown function DUF496 APL_RS03695 0002368823029c03f7d35b6882c5ebbd 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 104 5.0E-43 T 21-04-2016 IPR007458 Protein of unknown function DUF496 APL_RS03695 0002368823029c03f7d35b6882c5ebbd 111 Pfam PF04363 Protein of unknown function (DUF496) 9 99 7.5E-43 T 21-04-2016 IPR007458 Protein of unknown function DUF496 APL_RS03695 0002368823029c03f7d35b6882c5ebbd 111 PANTHER PTHR39591 2 107 3.8E-46 T 21-04-2016 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 PANTHER PTHR30183 1 540 1.7E-127 T 21-04-2016 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 PANTHER PTHR30183:SF8 1 540 1.7E-127 T 21-04-2016 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 SUPERFAMILY SSF161098 24 266 9.29E-32 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 SUPERFAMILY SSF161098 299 534 4.58E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 369 534 7.6E-8 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 266 1.9E-7 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 25 534 6.7E-124 T 21-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 Gene3D G3DSA:1.10.3720.10 297 534 4.2E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06930 a6c8304776dac8f840fcbb2ec1920424 541 Gene3D G3DSA:1.10.3720.10 18 269 2.4E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS09975 ab48a5ee07ae964b43b55a3c9231ece5 236 ProDom PD104362 PM1073 HI0966 9 132 3.0E-9 T 21-04-2016 APL_RS07135 9d07ff8afabcc52208381136f6351767 320 PANTHER PTHR10846 1 315 2.9E-60 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APL_RS07135 9d07ff8afabcc52208381136f6351767 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 311 1.9E-79 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APL_RS07135 9d07ff8afabcc52208381136f6351767 320 Pfam PF01699 Sodium/calcium exchanger protein 172 316 5.2E-35 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APL_RS07135 9d07ff8afabcc52208381136f6351767 320 Pfam PF01699 Sodium/calcium exchanger protein 6 144 1.5E-24 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Gene3D G3DSA:2.20.200.10 313 333 5.8E-4 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Gene3D G3DSA:2.20.200.10 99 139 5.8E-4 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 PANTHER PTHR30203 1 463 1.1E-124 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Pfam PF02321 Outer membrane efflux protein 281 458 5.2E-26 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Pfam PF02321 Outer membrane efflux protein 62 252 2.9E-24 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 SUPERFAMILY SSF56954 1 460 2.49E-79 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 PANTHER PTHR30203:SF13 1 463 1.1E-124 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Gene3D G3DSA:1.20.1600.10 50 88 2.7E-69 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Gene3D G3DSA:1.20.1600.10 140 312 2.7E-69 T 21-04-2016 APL_RS01335 8eae1da94c40b1fecf22a4427ed36d6d 464 Gene3D G3DSA:1.20.1600.10 348 460 2.7E-69 T 21-04-2016 APL_RS02775 dbde8a161e6717a5375a04e343c5c9de 213 Pfam PF06226 Protein of unknown function (DUF1007) 8 212 2.0E-52 T 21-04-2016 IPR010412 Protein of unknown function DUF1007 APL_RS02775 dbde8a161e6717a5375a04e343c5c9de 213 PIRSF PIRSF008159 1 213 1.1E-57 T 21-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, APL_RS03390 68ef4aa084f2676cf9d1354ed7c39ec5 80 PANTHER PTHR11098 9 80 6.3E-13 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APL_RS03390 68ef4aa084f2676cf9d1354ed7c39ec5 80 PANTHER PTHR11098:SF2 9 80 6.3E-13 T 21-04-2016 APL_RS03390 68ef4aa084f2676cf9d1354ed7c39ec5 80 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 9 80 1.1E-13 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APL_RS07390 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS10115 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS07660 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS00250 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS07610 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS07820 cb0c249e1768c8e71c38eccc21b25de0 262 Pfam PF00872 Transposase, Mutator family 71 176 1.3E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS04655 0231632752367313a027322707786e19 195 PANTHER PTHR11615 36 193 5.1E-82 T 21-04-2016 APL_RS04655 0231632752367313a027322707786e19 195 Gene3D G3DSA:3.40.50.740 109 174 1.6E-13 T 21-04-2016 APL_RS04655 0231632752367313a027322707786e19 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 5.6E-19 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS04655 0231632752367313a027322707786e19 195 SMART SM00926 43 104 9.1E-23 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APL_RS04655 0231632752367313a027322707786e19 195 SUPERFAMILY SSF53706 35 193 1.02E-51 T 21-04-2016 APL_RS04655 0231632752367313a027322707786e19 195 Gene3D G3DSA:2.20.25.90 37 108 1.9E-25 T 21-04-2016 APL_RS04655 0231632752367313a027322707786e19 195 PANTHER PTHR11615:SF126 36 193 5.1E-82 T 21-04-2016 APL_RS02330 8e45ff84ab8493dd521816b73e327a7d 288 Pfam PF04393 Protein of unknown function (DUF535) 18 280 2.2E-83 T 21-04-2016 IPR007488 Protein of unknown function DUF535 APL_RS02330 8e45ff84ab8493dd521816b73e327a7d 288 PANTHER PTHR38785 8 284 7.4E-74 T 21-04-2016 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 PANTHER PTHR33795 1 169 1.4E-52 T 21-04-2016 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 SUPERFAMILY SSF46689 57 161 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 SUPERFAMILY SSF46689 1 52 1.59E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 PANTHER PTHR33795:SF1 1 169 1.4E-52 T 21-04-2016 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 Pfam PF13518 Helix-turn-helix domain 65 118 8.6E-12 T 21-04-2016 APL_RS08840 1e69b55a5da5caf31215b0c263b36893 169 Gene3D G3DSA:1.10.10.60 62 155 2.2E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 APL_RS02175 8403e02e415d2e1a8667fafcfb1c8eb8 167 PANTHER PTHR36926 1 165 3.3E-59 T 21-04-2016 APL_RS02175 8403e02e415d2e1a8667fafcfb1c8eb8 167 Pfam PF02674 Colicin V production protein 2 146 6.4E-39 T 21-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APL_RS02175 8403e02e415d2e1a8667fafcfb1c8eb8 167 PANTHER PTHR36926:SF1 1 165 3.3E-59 T 21-04-2016 APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 Pfam PF01168 Alanine racemase, N-terminal domain 6 224 9.6E-37 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 Gene3D G3DSA:3.20.20.10 2 228 2.3E-95 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 PANTHER PTHR10146 1 231 1.8E-108 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 SUPERFAMILY SSF51419 1 222 4.71E-82 T 21-04-2016 IPR029066 PLP-binding barrel APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 224 1.6E-92 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 APL_RS00260 51e52ff25010feca871cfa16c7ec77b6 231 PIRSF PIRSF004848 1 230 1.5E-82 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 PANTHER PTHR22911:SF57 4 290 1.2E-80 T 21-04-2016 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 TIGRFAM TIGR00688 rarD: protein RarD 4 254 1.2E-61 T 21-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 Pfam PF00892 EamA-like transporter family 3 140 5.1E-12 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 PANTHER PTHR22911 4 290 1.2E-80 T 21-04-2016 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 SUPERFAMILY SSF103481 178 282 1.22E-5 T 21-04-2016 APL_RS05455 8fcafa7df8140674f6ea9e7bd9a8e301 297 SUPERFAMILY SSF103481 39 140 5.23E-9 T 21-04-2016 APL_RS08690 d907ec4bc368eaaf217488bef0df14a8 73 Gene3D G3DSA:1.20.5.300 1 53 3.4E-21 T 21-04-2016 APL_RS08690 d907ec4bc368eaaf217488bef0df14a8 73 Hamap MF_00715 Protein SlyX [slyX]. 6 73 16.536 T 21-04-2016 IPR007236 SlyX APL_RS08690 d907ec4bc368eaaf217488bef0df14a8 73 Pfam PF04102 SlyX 9 73 3.5E-23 T 21-04-2016 IPR007236 SlyX APL_RS08690 d907ec4bc368eaaf217488bef0df14a8 73 PANTHER PTHR36508 2 73 7.0E-24 T 21-04-2016 APL_RS01740 3276b98d26c5b1796d240e6efe966618 167 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 8 160 24.217 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APL_RS01740 3276b98d26c5b1796d240e6efe966618 167 Gene3D G3DSA:2.60.450.10 23 156 1.6E-38 T 21-04-2016 APL_RS01740 3276b98d26c5b1796d240e6efe966618 167 PANTHER PTHR36504 8 167 3.0E-41 T 21-04-2016 APL_RS01740 3276b98d26c5b1796d240e6efe966618 167 Pfam PF03968 OstA-like protein 32 141 1.2E-29 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APL_RS01740 3276b98d26c5b1796d240e6efe966618 167 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 160 1.6E-49 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APL_RS10105 2c1067f26078dec9c8b5cda3e48bd7a5 258 PANTHER PTHR30520:SF0 8 248 2.0E-77 T 21-04-2016 APL_RS10105 2c1067f26078dec9c8b5cda3e48bd7a5 258 Pfam PF01226 Formate/nitrite transporter 10 245 4.4E-71 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APL_RS10105 2c1067f26078dec9c8b5cda3e48bd7a5 258 PANTHER PTHR30520 8 248 2.0E-77 T 21-04-2016 APL_RS10105 2c1067f26078dec9c8b5cda3e48bd7a5 258 Gene3D G3DSA:1.20.1080.10 26 249 5.1E-72 T 21-04-2016 IPR023271 Aquaporin-like APL_RS06885 bcd1a8ddc5f540a343214d2a807d5b1c 185 Pfam PF00293 NUDIX domain 46 166 2.0E-11 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APL_RS06885 bcd1a8ddc5f540a343214d2a807d5b1c 185 SUPERFAMILY SSF55811 4 181 2.57E-36 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS06885 bcd1a8ddc5f540a343214d2a807d5b1c 185 Gene3D G3DSA:3.90.79.10 9 182 8.4E-38 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APL_RS06885 bcd1a8ddc5f540a343214d2a807d5b1c 185 PANTHER PTHR11839 5 180 1.2E-73 T 21-04-2016 APL_RS06885 bcd1a8ddc5f540a343214d2a807d5b1c 185 PANTHER PTHR11839:SF12 5 180 1.2E-73 T 21-04-2016 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Pfam PF01266 FAD dependent oxidoreductase 264 634 2.0E-39 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 PANTHER PTHR13847:SF182 222 583 1.5E-113 T 21-04-2016 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 PANTHER PTHR13847:SF182 604 667 1.5E-113 T 21-04-2016 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 264 663 2.7E-137 T 21-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 658 24.821 T 21-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 PANTHER PTHR13847 222 583 1.5E-113 T 21-04-2016 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 PANTHER PTHR13847 604 667 1.5E-113 T 21-04-2016 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 SUPERFAMILY SSF51905 569 580 3.5E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 SUPERFAMILY SSF51905 264 477 3.5E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 SUPERFAMILY SSF51905 607 658 3.5E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Gene3D G3DSA:3.40.50.150 10 247 5.7E-87 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Gene3D G3DSA:3.50.50.60 595 642 1.9E-27 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Gene3D G3DSA:3.50.50.60 353 476 1.9E-27 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Gene3D G3DSA:3.50.50.60 257 319 1.9E-27 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APL_RS04490 15a056d27f625bc4b106b5651699e3fc 667 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 240 5.3E-42 T 21-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 Pfam PF04310 MukB N-terminal 31 254 1.0E-116 T 21-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 Pfam PF16330 MukB hinge domain 674 838 3.2E-74 T 21-04-2016 IPR032520 MukB, hinge domain APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 Gene3D G3DSA:3.40.1140.10 32 252 1.0E-41 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1362 1450 1.4E-12 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 30 1496 11.095 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PIRSF PIRSF005246 30 1496 0.0 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 SUPERFAMILY SSF52540 51 251 9.51E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 126 453 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 471 614 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 875 906 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 922 966 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 1007 1142 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 1452 1485 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 639 842 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937:SF201 1238 1274 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 126 453 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 471 614 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 875 906 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 922 966 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 1007 1142 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 1452 1485 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 639 842 0.0 T 21-04-2016 APL_RS03050 5333d8997e9b5db3c0272febd6fd8ea0 1496 PANTHER PTHR18937 1238 1274 0.0 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 PANTHER PTHR18895:SF73 28 226 1.7E-58 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 SUPERFAMILY SSF53335 9 164 9.38E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 111 117 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 PANTHER PTHR18895 28 226 1.7E-58 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 5 236 53.355 T 21-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 Pfam PF05175 Methyltransferase small domain 28 137 6.1E-16 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 108 120 4.7E-7 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 42 56 4.7E-7 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 137 161 4.7E-7 T 21-04-2016 APL_RS10095 b4ee5b42a6ab50fd2811f4e59b4725e7 236 Gene3D G3DSA:3.40.50.150 26 229 5.0E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 PANTHER PTHR11067:SF9 1 197 3.3E-76 T 21-04-2016 APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 4 198 48.955 T 21-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 196 2.2E-67 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 Gene3D G3DSA:3.90.950.10 1 196 1.9E-78 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 Pfam PF01725 Ham1 family 6 194 2.9E-52 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 PANTHER PTHR11067 1 197 3.3E-76 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APL_RS02385 c8a2c62c4fa0167a743670399963bf79 198 SUPERFAMILY SSF52972 3 197 4.45E-70 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APL_RS08200 18a790d1ab5a016bcaed8b8bd74fa152 241 PANTHER PTHR34136:SF1 1 236 7.4E-89 T 21-04-2016 APL_RS08200 18a790d1ab5a016bcaed8b8bd74fa152 241 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 226 9.8E-51 T 21-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APL_RS08200 18a790d1ab5a016bcaed8b8bd74fa152 241 PANTHER PTHR34136 1 236 7.4E-89 T 21-04-2016 APL_RS08200 18a790d1ab5a016bcaed8b8bd74fa152 241 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 232 5.8E-60 T 21-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APL_RS03670 689e0c9775d61f1918b9db5d94e38df2 1105 Pfam PF04851 Type III restriction enzyme, res subunit 154 294 1.8E-10 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APL_RS03670 689e0c9775d61f1918b9db5d94e38df2 1105 Gene3D G3DSA:3.40.50.300 161 301 1.3E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03670 689e0c9775d61f1918b9db5d94e38df2 1105 SUPERFAMILY SSF52540 121 302 1.93E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 PANTHER PTHR30007 1 269 1.2E-83 T 21-04-2016 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 PANTHER PTHR30007:SF4 1 269 1.2E-83 T 21-04-2016 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 Gene3D G3DSA:3.20.20.140 154 261 3.7E-43 T 21-04-2016 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 Gene3D G3DSA:3.20.20.140 1 86 3.7E-43 T 21-04-2016 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 Pfam PF02811 PHP domain 4 96 9.5E-12 T 21-04-2016 IPR004013 PHP domain GO:0003824 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 SUPERFAMILY SSF89550 162 271 1.96E-53 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 SUPERFAMILY SSF89550 1 81 1.96E-53 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APL_RS03505 dccb8f2b6d30bf433819e6874a5756b1 272 SMART SM00481 3 68 7.0E-20 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 SUPERFAMILY SSF55021 5 84 3.71E-17 T 21-04-2016 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 Gene3D G3DSA:3.30.70.260 1 90 1.0E-27 T 21-04-2016 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 PANTHER PTHR34875 1 90 2.7E-24 T 21-04-2016 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 Pfam PF13740 ACT domain 5 78 7.6E-12 T 21-04-2016 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 PANTHER PTHR34875:SF2 1 90 2.7E-24 T 21-04-2016 APL_RS07870 abbd6ac57257d8cf1ce78f7393e4c43a 90 Hamap MF_01054 UPF0237 protein . 2 90 25.357 T 21-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type APL_RS09935 36830d14da3005f50fc011fdc3ae1409 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 7.0E-33 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 APL_RS09935 36830d14da3005f50fc011fdc3ae1409 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 6.7E-41 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 APL_RS06390 4df940175a5a50613ace6b4147572637 431 Pfam PF00860 Permease family 18 392 1.2E-41 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS06390 4df940175a5a50613ace6b4147572637 431 PANTHER PTHR11119 1 419 5.2E-163 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS06390 4df940175a5a50613ace6b4147572637 431 PANTHER PTHR11119:SF9 1 419 5.2E-163 T 21-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APL_RS06390 4df940175a5a50613ace6b4147572637 431 PIRSF PIRSF005353 1 431 1.4E-167 T 21-04-2016 IPR026033 Purine permease PbuG-like APL_RS02890 613f3dc6c192644bf1610c0205c23e3d 250 SUPERFAMILY SSF48452 109 225 3.8E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS02890 613f3dc6c192644bf1610c0205c23e3d 250 Gene3D G3DSA:1.25.40.10 39 225 2.9E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS01390 26ae1d0025a709c8137aebea25b57bf6 120 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 11 117 1.8E-31 T 21-04-2016 IPR006056 RidA family APL_RS01390 26ae1d0025a709c8137aebea25b57bf6 120 Pfam PF01042 Endoribonuclease L-PSP 9 118 5.6E-33 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS01390 26ae1d0025a709c8137aebea25b57bf6 120 Gene3D G3DSA:3.30.1330.40 8 117 2.6E-38 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS01390 26ae1d0025a709c8137aebea25b57bf6 120 PANTHER PTHR11803 10 118 7.2E-40 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family APL_RS01390 26ae1d0025a709c8137aebea25b57bf6 120 SUPERFAMILY SSF55298 8 118 1.73E-38 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APL_RS06145 9d155f7da315d04e37c811c63e6cd637 207 SUPERFAMILY SSF48452 97 194 1.38E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06145 9d155f7da315d04e37c811c63e6cd637 207 Pfam PF09976 Tetratricopeptide repeat-like domain 18 207 3.0E-51 T 21-04-2016 IPR018704 Tetratricopeptide repeat-like domain APL_RS06145 9d155f7da315d04e37c811c63e6cd637 207 PANTHER PTHR38035 5 207 4.1E-54 T 21-04-2016 APL_RS06145 9d155f7da315d04e37c811c63e6cd637 207 Gene3D G3DSA:1.25.40.10 98 192 7.3E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06145 9d155f7da315d04e37c811c63e6cd637 207 PIRSF PIRSF006170 5 207 4.2E-53 T 21-04-2016 IPR026039 Uncharacterised protein family UPF0070 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 1.2E-70 T 21-04-2016 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PANTHER PTHR24322:SF635 8 132 3.7E-73 T 21-04-2016 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PANTHER PTHR24322:SF635 148 180 3.7E-73 T 21-04-2016 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 3.5E-5 T 21-04-2016 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 5.4E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 5.4E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 5.4E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 6 239 6.5E-101 T 21-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PANTHER PTHR24322 8 132 3.7E-73 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PANTHER PTHR24322 148 180 3.7E-73 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 SUPERFAMILY SSF51735 2 240 7.26E-89 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 Gene3D G3DSA:3.40.50.720 1 240 2.0E-90 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS10560 e11bd289045d0f1849c7a6de6d6e18dc 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APL_RS01460 6daccde7ad7c42c2e082256a7f3c9140 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 250 6.1E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01460 6daccde7ad7c42c2e082256a7f3c9140 255 PANTHER PTHR30222:SF6 3 255 7.1E-140 T 21-04-2016 APL_RS01460 6daccde7ad7c42c2e082256a7f3c9140 255 Gene3D G3DSA:1.10.3720.10 1 254 1.5E-58 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01460 6daccde7ad7c42c2e082256a7f3c9140 255 SUPERFAMILY SSF161098 4 253 5.23E-54 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS01460 6daccde7ad7c42c2e082256a7f3c9140 255 PANTHER PTHR30222 3 255 7.1E-140 T 21-04-2016 APL_RS09070 2e21b5f322df93b8712b6bad2b9476df 218 Pfam PF04575 Protein of unknown function (DUF560) 64 217 1.8E-41 T 21-04-2016 IPR007655 Protein of unknown function DUF560 APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 PANTHER PTHR30443 1 517 1.7E-132 T 21-04-2016 APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 ProDom PD055757 TRANSFERASE HYDROLASE PHOSPHORYLETHANOLAMINE METAL-DEPENDENT MEMBRANE-ASSOCIATED PRECURSOR PREDICTED PE--LIPOOLIGOSACCHARIDE SIGNAL HI1063 451 516 2.0E-26 T 21-04-2016 IPR020098 Uncharacterised domain HI1063, transferase-like APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 Gene3D G3DSA:3.40.720.10 198 443 1.8E-5 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 SUPERFAMILY SSF53649 201 448 2.62E-11 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 Pfam PF00884 Sulfatase 199 474 9.0E-29 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APL_RS02985 f07650dfc67604f1ebede70ab3b38a88 517 PANTHER PTHR30443:SF4 1 517 1.7E-132 T 21-04-2016 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 Gene3D G3DSA:3.30.572.10 1 283 1.4E-76 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 Pfam PF00303 Thymidylate synthase 2 283 2.0E-71 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 PANTHER PTHR11548 1 283 1.4E-92 T 21-04-2016 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 31.113 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 SUPERFAMILY SSF55831 1 283 2.49E-89 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 21-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 3.6E-12 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 3.6E-12 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 3.6E-12 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 3.6E-12 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS00600 220a2b08d138f31cf4c2413561bdab81 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.9E-41 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APL_RS10470 724f71fd247b1525c11b6d2886bf84c3 89 PANTHER PTHR33279 14 89 1.7E-22 T 21-04-2016 APL_RS10470 724f71fd247b1525c11b6d2886bf84c3 89 Pfam PF01206 Sulfurtransferase TusA 21 89 9.2E-19 T 21-04-2016 IPR001455 TusA-like domain APL_RS10470 724f71fd247b1525c11b6d2886bf84c3 89 Gene3D G3DSA:3.30.110.40 17 89 1.3E-33 T 21-04-2016 IPR001455 TusA-like domain APL_RS10470 724f71fd247b1525c11b6d2886bf84c3 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 21-04-2016 IPR001455 TusA-like domain APL_RS10470 724f71fd247b1525c11b6d2886bf84c3 89 SUPERFAMILY SSF64307 8 89 4.71E-24 T 21-04-2016 IPR001455 TusA-like domain APL_RS05580 2e52899e6fa6d3cd553c5c6da28fb76f 168 PANTHER PTHR11431 10 166 1.5E-44 T 21-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APL_RS05580 2e52899e6fa6d3cd553c5c6da28fb76f 168 SUPERFAMILY SSF47240 4 160 8.55E-57 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS05580 2e52899e6fa6d3cd553c5c6da28fb76f 168 Gene3D G3DSA:1.20.1260.10 1 160 1.4E-58 T 21-04-2016 IPR012347 Ferritin-related APL_RS05580 2e52899e6fa6d3cd553c5c6da28fb76f 168 Pfam PF00210 Ferritin-like domain 7 141 9.5E-41 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APL_RS01005 18b67da0a8184a3f71ae3411c9649fa5 226 ProDom PD123385 COMPETENCE COMA A DNA TRANSFORMATION 17 181 2.0E-7 T 21-04-2016 APL_RS08095 a91e1450693ace6cf398414cd9e95ab6 440 PANTHER PTHR36106 4 440 1.2E-277 T 21-04-2016 APL_RS08095 a91e1450693ace6cf398414cd9e95ab6 440 PANTHER PTHR36106:SF1 4 440 1.2E-277 T 21-04-2016 APL_RS08095 a91e1450693ace6cf398414cd9e95ab6 440 PIRSF PIRSF004539 3 440 1.4E-182 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS08095 a91e1450693ace6cf398414cd9e95ab6 440 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 372 4.3E-152 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS08095 a91e1450693ace6cf398414cd9e95ab6 440 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 440 2.2E-195 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APL_RS06515 e17bc722d563cd20928f17c665182979 219 PANTHER PTHR34979 1 219 5.3E-29 T 21-04-2016 APL_RS06515 e17bc722d563cd20928f17c665182979 219 Pfam PF03591 AzlC protein 1 141 2.2E-32 T 21-04-2016 IPR011606 Branched-chain amino acid transport, permease APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.0E-7 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.0E-7 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 Gene3D G3DSA:1.10.10.10 8 74 2.1E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 PANTHER PTHR11751 1 75 2.2E-24 T 21-04-2016 APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 SMART SM00345 13 72 2.7E-20 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 PANTHER PTHR11751:SF389 1 75 2.2E-24 T 21-04-2016 APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 SUPERFAMILY SSF46785 5 74 3.01E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS05345 3a6cc405080a31fb527730bc0bf202db 78 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 3.3E-19 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APL_RS07340 f406d469880d0c86d9160fc5f6c1d472 263 PANTHER PTHR38034 1 263 2.2E-50 T 21-04-2016 APL_RS07340 f406d469880d0c86d9160fc5f6c1d472 263 Pfam PF01578 Cytochrome C assembly protein 61 262 6.8E-25 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APL_RS00160 865c712ebf96b02d8ff0bc53a25092ef 171 Pfam PF05656 Protein of unknown function (DUF805) 12 156 2.0E-28 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APL_RS00160 865c712ebf96b02d8ff0bc53a25092ef 171 PANTHER PTHR34980 1 171 3.0E-17 T 21-04-2016 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.292 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 PANTHER PTHR11109 1 217 1.9E-95 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 Pfam PF01227 GTP cyclohydrolase I 38 216 1.9E-63 T 21-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 Gene3D G3DSA:1.10.286.10 4 84 6.3E-30 T 21-04-2016 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 SUPERFAMILY SSF55620 7 217 2.08E-74 T 21-04-2016 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 Gene3D G3DSA:3.30.1130.10 90 217 6.7E-51 T 21-04-2016 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 21-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APL_RS04720 834f1ceb4a0a06bf238bef16e363f4b5 218 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 217 1.2E-84 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 70 92 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 184 203 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 147 171 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 204 223 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 113 138 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 39 60 3.2E-64 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 PANTHER PTHR30413 9 262 5.5E-12 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APL_RS08415 1ef54eeda5caf8b6290f7a064f7c31f0 265 Pfam PF01061 ABC-2 type transporter 19 227 3.5E-31 T 21-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 8.6E-27 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 SUPERFAMILY SSF46894 130 205 1.02E-23 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.4E-16 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.4E-16 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.4E-16 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 SUPERFAMILY SSF52172 5 137 5.12E-35 T 21-04-2016 IPR011006 CheY-like superfamily APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 SMART SM00448 5 118 5.0E-32 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 Gene3D G3DSA:1.10.10.10 147 206 3.6E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 Gene3D G3DSA:3.40.50.2300 3 146 2.6E-39 T 21-04-2016 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 SMART SM00421 146 203 5.2E-27 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APL_RS00295 838fe6e3aaa3c4a676f5e33e03052c8c 209 Pfam PF00072 Response regulator receiver domain 7 118 5.9E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APL_RS08345 d0d524a19c5250d60c6399a2d6fc365b 246 SUPERFAMILY SSF74653 147 242 5.36E-12 T 21-04-2016 APL_RS08345 d0d524a19c5250d60c6399a2d6fc365b 246 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 241 3.2E-11 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 APL_RS08345 d0d524a19c5250d60c6399a2d6fc365b 246 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 178 241 7.9E-12 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 APL_RS08345 d0d524a19c5250d60c6399a2d6fc365b 246 Gene3D G3DSA:3.30.1150.10 175 241 3.9E-7 T 21-04-2016 APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 7.7E-35 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 Gene3D G3DSA:1.20.5.620 63 122 2.1E-18 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.659 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 SUPERFAMILY SSF81573 63 121 3.92E-13 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 PANTHER PTHR33445 1 156 3.1E-42 T 21-04-2016 APL_RS08770 78af23a32e4db939d33ba1c4a0b3dabe 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.8E-52 T 21-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APL_RS10720 d48cfee20c3a2c2df7a104088230d7e7 185 Gene3D G3DSA:3.40.50.1240 1 176 2.0E-12 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS10720 d48cfee20c3a2c2df7a104088230d7e7 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 48 164 5.7E-6 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APL_RS10720 d48cfee20c3a2c2df7a104088230d7e7 185 SUPERFAMILY SSF53254 1 170 2.36E-15 T 21-04-2016 IPR029033 Histidine phosphatase superfamily APL_RS03815 e6cf1dccfadff874a8ea41b12c9afe64 237 Pfam PF04474 Protein of unknown function (DUF554) 3 229 3.3E-69 T 21-04-2016 IPR007563 Protein of unknown function DUF554 APL_RS03815 e6cf1dccfadff874a8ea41b12c9afe64 237 PANTHER PTHR36111:SF1 2 237 6.4E-89 T 21-04-2016 APL_RS03815 e6cf1dccfadff874a8ea41b12c9afe64 237 PANTHER PTHR36111 2 237 6.4E-89 T 21-04-2016 APL_RS00760 4c7a8990f82b3959c597574d28222439 325 Gene3D G3DSA:1.10.620.20 8 281 1.5E-57 T 21-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APL_RS00760 4c7a8990f82b3959c597574d28222439 325 Pfam PF00268 Ribonucleotide reductase, small chain 9 283 2.7E-49 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APL_RS00760 4c7a8990f82b3959c597574d28222439 325 SUPERFAMILY SSF47240 8 325 1.01E-64 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS04550 6a629e8b4fe0f32717afd41d1c46cdc3 234 Gene3D G3DSA:3.40.50.880 3 229 1.5E-76 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS04550 6a629e8b4fe0f32717afd41d1c46cdc3 234 Pfam PF03575 Peptidase family S51 4 208 6.1E-69 T 21-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 APL_RS04550 6a629e8b4fe0f32717afd41d1c46cdc3 234 SUPERFAMILY SSF52317 3 217 8.79E-47 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like APL_RS04550 6a629e8b4fe0f32717afd41d1c46cdc3 234 PANTHER PTHR20842 1 217 3.8E-77 T 21-04-2016 APL_RS04550 6a629e8b4fe0f32717afd41d1c46cdc3 234 Hamap MF_00510 Peptidase E [pepE]. 2 218 46.576 T 21-04-2016 IPR023172 Peptidase S51, dipeptidase E GO:0016805 APL_RS09225 27cdad321659ea778ee8c7e9ffbda5d9 237 PANTHER PTHR30545 1 220 7.9E-85 T 21-04-2016 APL_RS09225 27cdad321659ea778ee8c7e9ffbda5d9 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 220 3.1E-78 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein APL_RS09225 27cdad321659ea778ee8c7e9ffbda5d9 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 231 55.748 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein APL_RS09225 27cdad321659ea778ee8c7e9ffbda5d9 237 PANTHER PTHR30545:SF2 1 220 7.9E-85 T 21-04-2016 APL_RS09225 27cdad321659ea778ee8c7e9ffbda5d9 237 Pfam PF03749 Sugar fermentation stimulation protein 12 220 6.6E-75 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 277 1.2E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 SUPERFAMILY SSF161098 36 274 1.42E-32 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 279 4.8E-81 T 21-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 Gene3D G3DSA:1.10.3720.10 65 278 3.7E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 PANTHER PTHR30425 1 279 1.3E-114 T 21-04-2016 APL_RS06570 4b5b99d11b7fb2645c6a74c7982546d9 283 PANTHER PTHR30425:SF0 1 279 1.3E-114 T 21-04-2016 APL_RS10760 1e0035128118614c7fa2ee0d89bc8271 164 Pfam PF14595 Thioredoxin 1 131 2.3E-34 T 21-04-2016 APL_RS10760 1e0035128118614c7fa2ee0d89bc8271 164 SUPERFAMILY SSF52833 50 115 5.91E-5 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS10760 1e0035128118614c7fa2ee0d89bc8271 164 Gene3D G3DSA:3.40.30.10 3 163 1.4E-32 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 PANTHER PTHR30454 6 368 1.3E-218 T 21-04-2016 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 SUPERFAMILY SSF56014 266 357 3.53E-12 T 21-04-2016 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 Gene3D G3DSA:3.20.20.70 38 133 1.1E-8 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 SUPERFAMILY SSF51604 22 139 3.53E-9 T 21-04-2016 IPR029065 Enolase C-terminal domain-like APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 Pfam PF04551 GcpE protein 14 355 1.4E-131 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 352 1.1E-126 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 PIRSF PIRSF004640 3 365 1.5E-146 T 21-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APL_RS06155 f4f4a870631d1ec9decf7230e077c09c 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 360 34.621 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APL_RS02915 2c67762d90db5fa0e8c0c908c0a0f2e1 167 Pfam PF16971 Rough colony protein B, tight adherence - tad - subunit 1 167 1.4E-79 T 21-04-2016 IPR031579 Rough colony protein B APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 PANTHER PTHR13693:SF59 18 384 9.2E-194 T 21-04-2016 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 PANTHER PTHR13693 18 384 9.2E-194 T 21-04-2016 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 Gene3D G3DSA:3.90.1150.10 277 386 7.8E-23 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 Gene3D G3DSA:3.40.640.10 73 276 4.8E-81 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 Pfam PF00155 Aminotransferase class I and II 36 385 1.9E-61 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APL_RS04915 84ca115b8e74e970e8b6ad3e1d4bcf3a 387 SUPERFAMILY SSF53383 10 387 6.26E-93 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS06325 fcfce059267781e9ac6e77a8678aa578 236 PANTHER PTHR13256 8 226 9.1E-73 T 21-04-2016 APL_RS06325 fcfce059267781e9ac6e77a8678aa578 236 PANTHER PTHR13256:SF22 8 226 9.1E-73 T 21-04-2016 APL_RS06325 fcfce059267781e9ac6e77a8678aa578 236 Pfam PF13302 Acetyltransferase (GNAT) domain 62 178 6.6E-15 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS06325 fcfce059267781e9ac6e77a8678aa578 236 SUPERFAMILY SSF55729 46 203 5.31E-36 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS06325 fcfce059267781e9ac6e77a8678aa578 236 Gene3D G3DSA:3.40.630.30 15 219 3.8E-53 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 392 48.993 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 PANTHER PTHR10314:SF3 8 388 2.6E-226 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 7.5E-190 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 379 2.3E-49 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 Gene3D G3DSA:3.40.50.1100 98 177 4.0E-20 T 21-04-2016 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 81 95 - T 21-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 SUPERFAMILY SSF53686 7 391 1.96E-142 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 PIRSF PIRSF001413 2 395 6.3E-166 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 Gene3D G3DSA:3.40.50.1100 178 394 2.4E-95 T 21-04-2016 APL_RS02410 e191c4713f9bb9ff3d5ea9714169092f 396 PANTHER PTHR10314 8 388 2.6E-226 T 21-04-2016 APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 PANTHER PTHR37423 1 246 1.3E-76 T 21-04-2016 APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 SUPERFAMILY SSF48452 27 121 1.98E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 Pfam PF13525 Outer membrane lipoprotein 29 236 3.3E-57 T 21-04-2016 APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 243 42.626 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 244 1.8E-70 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 Gene3D G3DSA:1.25.40.10 211 224 1.6E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS05845 45aad8805226b19c3956d1b8e8e6dd97 258 Gene3D G3DSA:1.25.40.10 26 121 1.6E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06250 a01e1633ecee5cf97a506ca896921143 626 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 330 406 5.2E-9 T 21-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain APL_RS06250 a01e1633ecee5cf97a506ca896921143 626 Pfam PF04326 Putative DNA-binding domain 22 141 3.2E-12 T 21-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 PANTHER PTHR30183:SF7 128 683 0.0 T 21-04-2016 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 495 673 5.9E-10 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 205 395 2.5E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 SUPERFAMILY SSF161098 429 669 2.06E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 PANTHER PTHR30183 128 683 0.0 T 21-04-2016 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 Gene3D G3DSA:1.10.3720.10 425 675 9.6E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 Gene3D G3DSA:1.10.3720.10 141 396 1.8E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS07640 c0b15ee6ec36a6fa24d985efb5461c0b 687 SUPERFAMILY SSF161098 145 392 2.49E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02465 c4ed68caf326c26713aa8b62565f9a10 113 ProDom PD396235 MEMBRANE PM1478 TRANSMEMBRANE 41 110 0.001 T 21-04-2016 APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 PANTHER PTHR30041 1 114 3.3E-38 T 21-04-2016 APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.3E-28 T 21-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 PANTHER PTHR30041:SF3 1 114 3.3E-38 T 21-04-2016 APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 SUPERFAMILY SSF52833 2 114 1.16E-33 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 Gene3D G3DSA:3.40.30.10 3 114 2.3E-38 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS09970 a85adfa98bc187d48f0330b00ff47adc 116 Pfam PF03960 ArsC family 6 112 5.9E-18 T 21-04-2016 IPR006660 Arsenate reductase-like APL_RS10195 09e9b2ff23bb73f887bc48a3972da096 655 PIRSF PIRSF015380 1 655 8.6E-290 T 21-04-2016 IPR011385 Site-specific recombinase Gcr APL_RS10195 09e9b2ff23bb73f887bc48a3972da096 655 Gene3D G3DSA:1.20.1080.10 333 497 3.3E-8 T 21-04-2016 IPR023271 Aquaporin-like APL_RS10195 09e9b2ff23bb73f887bc48a3972da096 655 Pfam PF10136 Site-specific recombinase 24 650 9.2E-224 T 21-04-2016 IPR011385 Site-specific recombinase Gcr APL_RS07490 9b4f96c67f8f8c58a4f975ef0c9395f9 141 PANTHER PTHR42641:SF2 7 141 3.4E-27 T 21-04-2016 APL_RS07490 9b4f96c67f8f8c58a4f975ef0c9395f9 141 Pfam PF05232 Chlorhexidine efflux transporter 4 65 1.2E-16 T 21-04-2016 IPR007896 Chlorhexidine efflux transporter APL_RS07490 9b4f96c67f8f8c58a4f975ef0c9395f9 141 Pfam PF05232 Chlorhexidine efflux transporter 71 133 2.2E-22 T 21-04-2016 IPR007896 Chlorhexidine efflux transporter APL_RS07490 9b4f96c67f8f8c58a4f975ef0c9395f9 141 PANTHER PTHR42641 7 141 3.4E-27 T 21-04-2016 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 Gene3D G3DSA:3.40.50.1580 17 248 5.9E-79 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 250 1.1E-106 T 21-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 PANTHER PTHR21234:SF22 1 250 5.1E-164 T 21-04-2016 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 Pfam PF01048 Phosphorylase superfamily 18 243 1.5E-37 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 SUPERFAMILY SSF53167 5 247 7.46E-70 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APL_RS09780 3bf06a6b87870cfcd39e2c75b2b494c2 254 PANTHER PTHR21234 1 250 5.1E-164 T 21-04-2016 IPR018017 Nucleoside phosphorylase APL_RS02740 7ad35e90c4608a27fab4e7c14a8fcbd6 245 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 14 243 1.8E-73 T 21-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APL_RS02740 7ad35e90c4608a27fab4e7c14a8fcbd6 245 Pfam PF05100 Phage minor tail protein L 39 242 2.5E-75 T 21-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APL_RS00635 81f0f51fc7a234ec5e6a8b91834bbfaf 184 PANTHER PTHR37425 1 184 1.3E-56 T 21-04-2016 APL_RS00635 81f0f51fc7a234ec5e6a8b91834bbfaf 184 Pfam PF05951 Bacterial protein of unknown function (DUF882) 36 182 5.8E-50 T 21-04-2016 IPR010275 Protein of unknown function DUF882 APL_RS00635 81f0f51fc7a234ec5e6a8b91834bbfaf 184 SUPERFAMILY SSF55166 67 183 9.16E-32 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APL_RS00635 81f0f51fc7a234ec5e6a8b91834bbfaf 184 Gene3D G3DSA:3.30.1380.10 68 183 2.9E-30 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APL_RS08400 0786defaa77d9d9ab593a5c97cc30ac2 321 Pfam PF00534 Glycosyl transferases group 1 156 265 2.4E-14 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 APL_RS08400 0786defaa77d9d9ab593a5c97cc30ac2 321 Gene3D G3DSA:3.40.50.2000 142 263 6.4E-8 T 21-04-2016 APL_RS08400 0786defaa77d9d9ab593a5c97cc30ac2 321 SUPERFAMILY SSF53756 52 319 1.1E-27 T 21-04-2016 APL_RS08400 0786defaa77d9d9ab593a5c97cc30ac2 321 PANTHER PTHR12526 58 269 5.2E-20 T 21-04-2016 APL_RS02800 b3c4557244c5cb208bc5f7e9d855971c 249 SUPERFAMILY SSF161098 48 236 1.44E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02800 b3c4557244c5cb208bc5f7e9d855971c 249 Gene3D G3DSA:1.10.3720.10 47 242 4.7E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02800 b3c4557244c5cb208bc5f7e9d855971c 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 240 1.3E-31 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS02800 b3c4557244c5cb208bc5f7e9d855971c 249 PANTHER PTHR30151 13 242 2.5E-93 T 21-04-2016 APL_RS02800 b3c4557244c5cb208bc5f7e9d855971c 249 PANTHER PTHR30151:SF21 13 242 2.5E-93 T 21-04-2016 APL_RS04640 2f448bce557c0e4eae46ed3f55472eec 471 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 451 1.3E-82 T 21-04-2016 IPR010352 Protein of unknown function DUF945 APL_RS00725 0e0458d2f4851f1c194e5d9467cac779 371 Pfam PF05651 Putative sugar diacid recognition 6 139 9.8E-50 T 21-04-2016 IPR008599 Putative sugar diacid recognition APL_RS00725 0e0458d2f4851f1c194e5d9467cac779 371 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 366 1.1E-17 T 21-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain APL_RS00725 0e0458d2f4851f1c194e5d9467cac779 371 PANTHER PTHR33744 1 370 8.6E-106 T 21-04-2016 APL_RS00725 0e0458d2f4851f1c194e5d9467cac779 371 PANTHER PTHR33744:SF1 1 370 8.6E-106 T 21-04-2016 APL_RS10350 8ba0172142631754206c1c506b236812 115 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 101 2.2E-5 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS10350 8ba0172142631754206c1c506b236812 115 SUPERFAMILY SSF56935 16 103 3.89E-8 T 21-04-2016 APL_RS10350 8ba0172142631754206c1c506b236812 115 Gene3D G3DSA:2.170.130.10 15 103 1.8E-9 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 PANTHER PTHR33843 2 475 1.4E-254 T 21-04-2016 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 SUPERFAMILY SSF52794 507 599 4.97E-16 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 Pfam PF03611 PTS system sugar-specific permease component 14 424 8.9E-125 T 21-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 509 585 9.5E-13 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 Gene3D G3DSA:3.40.50.270 509 598 2.0E-19 T 21-04-2016 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 PANTHER PTHR33843:SF5 2 475 1.4E-254 T 21-04-2016 APL_RS09020 a385b9bf2b9fa2153c0e732eac356747 601 PIRSF PIRSF037343 1 601 3.3E-300 T 21-04-2016 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted APL_RS09135 47d45e1d0d3210be79ed9df2c0eba578 90 SUPERFAMILY SSF47413 6 65 2.62E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS09135 47d45e1d0d3210be79ed9df2c0eba578 90 Gene3D G3DSA:1.10.260.40 10 73 6.8E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 SUPERFAMILY SSF81301 16 280 1.85E-84 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Pfam PF08335 GlnD PII-uridylyltransferase 848 933 5.5E-7 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Pfam PF08335 GlnD PII-uridylyltransferase 291 447 3.3E-45 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 25 269 4.4E-92 T 21-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 570 820 4.5E-90 T 21-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 SUPERFAMILY SSF81593 831 959 7.85E-33 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Gene3D G3DSA:3.30.460.10 106 279 1.9E-59 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Gene3D G3DSA:3.30.460.10 654 825 2.2E-59 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 SUPERFAMILY SSF81593 281 447 2.98E-42 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 SUPERFAMILY SSF81301 540 830 7.52E-83 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 PANTHER PTHR30621 25 957 0.0 T 21-04-2016 APL_RS05080 842c3e78ef5a3a3e9ef6a8cd7f555b79 959 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 20 959 18.801 T 21-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 APL_RS00280 756ae1f009260f22c2c2306c18cf4ede 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.7E-41 T 21-04-2016 IPR013527 YicC-like, N-terminal APL_RS00280 756ae1f009260f22c2c2306c18cf4ede 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.3E-119 T 21-04-2016 IPR005229 Conserved hypothetical protein CHP00255 APL_RS00280 756ae1f009260f22c2c2306c18cf4ede 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 7.7E-34 T 21-04-2016 IPR013551 Domain of unknown function DUF1732 APL_RS00280 756ae1f009260f22c2c2306c18cf4ede 287 PANTHER PTHR30636 1 287 3.0E-104 T 21-04-2016 APL_RS06770 2a61e8b6a48417210e18b3bc140c6352 175 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 152 3.0E-55 T 21-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APL_RS06770 2a61e8b6a48417210e18b3bc140c6352 175 PANTHER PTHR33371 1 158 6.0E-41 T 21-04-2016 APL_RS06770 2a61e8b6a48417210e18b3bc140c6352 175 Pfam PF02470 MlaD protein 40 117 2.6E-20 T 21-04-2016 IPR003399 Mce/MlaD APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PANTHER PTHR11616:SF11 10 485 3.2E-138 T 21-04-2016 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 SUPERFAMILY SSF161070 11 494 4.58E-133 T 21-04-2016 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 Pfam PF00209 Sodium:neurotransmitter symporter family 11 127 1.1E-44 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 Pfam PF00209 Sodium:neurotransmitter symporter family 130 495 1.1E-90 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 92 118 1.3E-29 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 19 40 1.3E-29 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 319 338 1.3E-29 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 48 67 1.3E-29 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 265 285 1.3E-29 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 35 49 - T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS07350 7376acf69960c6617630a4e3b2972692 504 PANTHER PTHR11616 10 485 3.2E-138 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS08660 db84fdb423b3c6e0eb69684d5e77b055 66 Pfam PF05433 Glycine zipper 2TM domain 30 65 3.1E-9 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.231 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 Gene3D G3DSA:3.90.226.10 3 193 9.7E-89 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 SUPERFAMILY SSF52096 10 194 2.73E-74 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PANTHER PTHR10381:SF22 1 196 5.8E-136 T 21-04-2016 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 21-04-2016 IPR033135 ClpP, histidine active site APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 Pfam PF00574 Clp protease 13 192 2.8E-88 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.1E-107 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.0E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.0E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.0E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.0E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.0E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APL_RS06705 3b1f3441e53eb9048b43c83f695de694 196 PANTHER PTHR10381 1 196 5.8E-136 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APL_RS05265 38202d3ecd678b6c95a3294aa14956b8 289 PANTHER PTHR30503 2 278 3.4E-82 T 21-04-2016 APL_RS05265 38202d3ecd678b6c95a3294aa14956b8 289 Pfam PF05661 Protein of unknown function (DUF808) 4 279 1.1E-105 T 21-04-2016 IPR008526 Inner membrane protein YedI APL_RS05265 38202d3ecd678b6c95a3294aa14956b8 289 PIRSF PIRSF016660 1 289 2.0E-111 T 21-04-2016 IPR008526 Inner membrane protein YedI APL_RS08360 afd1337041a0338744bc92f00430456b 112 Pfam PF02615 Malate/L-lactate dehydrogenase 3 92 2.7E-20 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08360 afd1337041a0338744bc92f00430456b 112 SUPERFAMILY SSF89733 1 91 1.57E-19 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08360 afd1337041a0338744bc92f00430456b 112 PANTHER PTHR11091:SF3 1 92 3.4E-50 T 21-04-2016 APL_RS08360 afd1337041a0338744bc92f00430456b 112 PANTHER PTHR11091 1 92 3.4E-50 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APL_RS08360 afd1337041a0338744bc92f00430456b 112 Gene3D G3DSA:1.10.1530.10 1 81 6.2E-27 T 21-04-2016 APL_RS00410 a0ee125b5942c2dd827486791d38c525 129 PANTHER PTHR30558 2 128 3.8E-27 T 21-04-2016 APL_RS00410 a0ee125b5942c2dd827486791d38c525 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 124 5.9E-21 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APL_RS00410 a0ee125b5942c2dd827486791d38c525 129 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 4 124 3.0E-49 T 21-04-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 APL_RS00410 a0ee125b5942c2dd827486791d38c525 129 PANTHER PTHR30558:SF3 2 128 3.8E-27 T 21-04-2016 APL_RS05165 3e820b0c0ec6c7103cb9eccfdc671096 131 Pfam PF13333 Integrase core domain 75 130 1.9E-22 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APL_RS05165 3e820b0c0ec6c7103cb9eccfdc671096 131 PANTHER PTHR32552 1 131 2.5E-36 T 21-04-2016 APL_RS05165 3e820b0c0ec6c7103cb9eccfdc671096 131 SUPERFAMILY SSF53098 3 120 1.97E-22 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS05165 3e820b0c0ec6c7103cb9eccfdc671096 131 Gene3D G3DSA:3.30.420.10 2 117 2.3E-20 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APL_RS04395 ad0c529264f395bb10b5f1208c4a0f59 374 PANTHER PTHR30294 1 366 3.2E-100 T 21-04-2016 APL_RS04395 ad0c529264f395bb10b5f1208c4a0f59 374 PANTHER PTHR30294:SF22 1 366 3.2E-100 T 21-04-2016 APL_RS04395 ad0c529264f395bb10b5f1208c4a0f59 374 Pfam PF12698 ABC-2 family transporter protein 26 360 5.6E-32 T 21-04-2016 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 50.906 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 PANTHER PTHR11680 1 419 0.0 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 SUPERFAMILY SSF53383 4 419 4.87E-174 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 PANTHER PTHR11680:SF9 1 419 0.0 T 21-04-2016 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 Gene3D G3DSA:3.90.1150.10 286 420 4.1E-49 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 PIRSF PIRSF000412 1 421 3.2E-164 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.4E-183 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 Gene3D G3DSA:3.40.640.10 37 285 2.5E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APL_RS01080 3b219c2c06f30b4465efae9da94311c0 421 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 21-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APL_RS09885 2436d7f4f1889bae74436a3b7cec08fd 117 Pfam PF02411 MerT mercuric transport protein 14 115 2.0E-10 T 21-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 APL_RS06855 af397f378c92a87a0f9eb5f80eb4126b 150 Gene3D G3DSA:3.40.50.300 3 84 5.3E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS06855 af397f378c92a87a0f9eb5f80eb4126b 150 SUPERFAMILY SSF52540 1 126 1.37E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 Pfam PF03476 MOSC N-terminal beta barrel domain 2 114 3.2E-19 T 21-04-2016 IPR005303 MOSC, N-terminal beta barrel APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 SUPERFAMILY SSF141673 3 129 4.45E-22 T 21-04-2016 APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 PANTHER PTHR14237 3 262 2.7E-48 T 21-04-2016 APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 Pfam PF03473 MOSC domain 135 258 1.0E-25 T 21-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 SUPERFAMILY SSF50800 2 49 3.56E-17 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain APL_RS04215 922aa8173c7bb5ed90dc94ee6ea0d47e 262 SUPERFAMILY SSF50800 145 259 3.56E-17 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain APL_RS02610 af4712d3497098f0a3a96ac3f7e123ef 190 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 22 81 4.9E-14 T 21-04-2016 IPR011741 Phage conserved hypothetical protein, C-terminal APL_RS10750 001ae610679fe39bdcfb1a7a4fdae42a 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 213 1.1E-58 T 21-04-2016 IPR003744 Protein of unknown function DUF165 APL_RS10750 001ae610679fe39bdcfb1a7a4fdae42a 221 Pfam PF02592 Putative vitamin uptake transporter 52 208 5.4E-39 T 21-04-2016 IPR003744 Protein of unknown function DUF165 APL_RS10750 001ae610679fe39bdcfb1a7a4fdae42a 221 PANTHER PTHR34300 1 217 4.8E-110 T 21-04-2016 APL_RS10750 001ae610679fe39bdcfb1a7a4fdae42a 221 PANTHER PTHR34300:SF1 1 217 4.8E-110 T 21-04-2016 APL_RS05475 c12aac22c7311b684826588d3dc5666a 173 SUPERFAMILY SSF50475 12 163 4.52E-34 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS05475 c12aac22c7311b684826588d3dc5666a 173 Gene3D G3DSA:2.30.110.10 18 151 3.2E-42 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS05475 c12aac22c7311b684826588d3dc5666a 173 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 2.0E-89 T 21-04-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain APL_RS05475 c12aac22c7311b684826588d3dc5666a 173 PIRSF PIRSF004633 1 173 7.2E-73 T 21-04-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain APL_RS05475 c12aac22c7311b684826588d3dc5666a 173 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 1.5E-16 T 21-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APL_RS02910 619c4e3a793f18ea95f2b430505d8b33 375 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 146 323 3.3E-5 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APL_RS02910 619c4e3a793f18ea95f2b430505d8b33 375 SUPERFAMILY SSF52540 144 349 6.07E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02910 619c4e3a793f18ea95f2b430505d8b33 375 Gene3D G3DSA:3.40.50.300 143 202 1.2E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02910 619c4e3a793f18ea95f2b430505d8b33 375 Gene3D G3DSA:3.40.50.300 215 351 1.0E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02295 4efe22951e1dd655cc729d82f4b8c1bd 241 PANTHER PTHR30296:SF0 2 239 1.4E-105 T 21-04-2016 APL_RS02295 4efe22951e1dd655cc729d82f4b8c1bd 241 Pfam PF02754 Cysteine-rich domain 135 218 8.6E-13 T 21-04-2016 IPR004017 Cysteine-rich domain APL_RS02295 4efe22951e1dd655cc729d82f4b8c1bd 241 Pfam PF02754 Cysteine-rich domain 3 84 4.8E-12 T 21-04-2016 IPR004017 Cysteine-rich domain APL_RS02295 4efe22951e1dd655cc729d82f4b8c1bd 241 PANTHER PTHR30296 2 239 1.4E-105 T 21-04-2016 APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 Pfam PF02635 DsrE/DsrF-like family 1 125 7.7E-27 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 PANTHER PTHR34874 1 125 3.0E-47 T 21-04-2016 APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 125 4.8E-49 T 21-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 PANTHER PTHR34874:SF1 1 125 3.0E-47 T 21-04-2016 APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 Gene3D G3DSA:3.40.1260.10 1 125 3.9E-30 T 21-04-2016 IPR027396 DsrEFH-like APL_RS08705 f9729ffd1d5d5118e77954b9115f414a 125 SUPERFAMILY SSF75169 1 125 2.35E-34 T 21-04-2016 IPR027396 DsrEFH-like APL_RS07495 b6484d9967525728aee8589f253eb3fb 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 2.6E-48 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APL_RS07495 b6484d9967525728aee8589f253eb3fb 336 PANTHER PTHR32196 1 336 6.3E-223 T 21-04-2016 APL_RS07495 b6484d9967525728aee8589f253eb3fb 336 PANTHER PTHR32196:SF18 1 336 6.3E-223 T 21-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 APL_RS08265 1dfb4a38e0c29a14d2597545d14485df 355 Gene3D G3DSA:1.20.1250.20 11 184 1.9E-25 T 21-04-2016 APL_RS08265 1dfb4a38e0c29a14d2597545d14485df 355 SUPERFAMILY SSF103473 9 352 1.57E-29 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS08265 1dfb4a38e0c29a14d2597545d14485df 355 Pfam PF07690 Major Facilitator Superfamily 12 340 7.8E-19 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 1.7E-35 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.3E-50 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 21-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 Gene3D G3DSA:3.90.470.10 1 109 2.7E-44 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 PANTHER PTHR13501 1 109 3.2E-54 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 SUPERFAMILY SSF54843 1 109 1.7E-43 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APL_RS09385 76e0ce2ad4949f943044c81f0a484e5d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.337 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APL_RS01095 099e4694eb80419e7dcddc834b80a49b 318 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 318 8.802 T 21-04-2016 IPR002729 CRISPR-associated protein Cas1 APL_RS01095 099e4694eb80419e7dcddc834b80a49b 318 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 15 312 1.3E-144 T 21-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype APL_RS01095 099e4694eb80419e7dcddc834b80a49b 318 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 22 314 1.2E-68 T 21-04-2016 IPR002729 CRISPR-associated protein Cas1 APL_RS01095 099e4694eb80419e7dcddc834b80a49b 318 Pfam PF01867 CRISPR associated protein Cas1 29 306 1.5E-24 T 21-04-2016 IPR002729 CRISPR-associated protein Cas1 APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 SUPERFAMILY SSF53271 4 206 3.28E-68 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.567 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 PANTHER PTHR10285 1 197 5.5E-100 T 21-04-2016 APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.9E-65 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 Gene3D G3DSA:3.40.50.2020 2 208 3.8E-75 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like APL_RS02045 dcf26a583ffc989e69032a5b9ce737df 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.6E-91 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APL_RS10150 ea589772eef73013155fe2c704d17038 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 365 5.0E-53 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APL_RS10150 ea589772eef73013155fe2c704d17038 375 PANTHER PTHR32196 1 170 1.6E-152 T 21-04-2016 APL_RS10150 ea589772eef73013155fe2c704d17038 375 PANTHER PTHR32196 221 375 1.6E-152 T 21-04-2016 APL_RS10150 ea589772eef73013155fe2c704d17038 375 PANTHER PTHR32196:SF32 1 170 1.6E-152 T 21-04-2016 APL_RS10150 ea589772eef73013155fe2c704d17038 375 PANTHER PTHR32196:SF32 221 375 1.6E-152 T 21-04-2016 APL_RS05315 9c16b51e5ef0f9efe67fdab87675835f 422 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 414 7.1E-154 T 21-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APL_RS05315 9c16b51e5ef0f9efe67fdab87675835f 422 Pfam PF07670 Nucleoside recognition 99 195 6.1E-10 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APL_RS05315 9c16b51e5ef0f9efe67fdab87675835f 422 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.8E-22 T 21-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APL_RS05315 9c16b51e5ef0f9efe67fdab87675835f 422 PANTHER PTHR10590 6 415 4.4E-202 T 21-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APL_RS05315 9c16b51e5ef0f9efe67fdab87675835f 422 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 414 8.4E-72 T 21-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 PANTHER PTHR10434 1 242 7.7E-128 T 21-04-2016 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 Pfam PF01553 Acyltransferase 62 178 1.9E-32 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 Gene3D G3DSA:3.40.1130.10 64 179 3.0E-17 T 21-04-2016 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 SMART SM00563 65 180 6.3E-41 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 178 1.4E-43 T 21-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 PANTHER PTHR10434:SF20 1 242 7.7E-128 T 21-04-2016 APL_RS07850 b238f4b7df7e5fd2e896a6c5ba4f6822 244 SUPERFAMILY SSF69593 6 238 2.75E-50 T 21-04-2016 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 378 3.5E-124 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 PANTHER PTHR30474:SF2 2 384 5.1E-158 T 21-04-2016 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 PANTHER PTHR30474 2 384 5.1E-158 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 Pfam PF01098 Cell cycle protein 25 380 1.4E-114 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APL_RS00085 db45fac60655d9fa17ac2291d0a53fdc 392 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 21 389 39.389 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 PANTHER PTHR30255 19 569 1.7E-200 T 21-04-2016 APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 SUPERFAMILY SSF64182 44 463 3.01E-115 T 21-04-2016 APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 Pfam PF01368 DHH family 70 202 1.1E-9 T 21-04-2016 IPR001667 DDH domain APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 PANTHER PTHR30255:SF2 19 569 1.7E-200 T 21-04-2016 APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 Pfam PF02272 DHHA1 domain 376 452 2.1E-12 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APL_RS02360 f8d6ccb9b2acf9b04450439da828db6e 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 19 568 1.3E-156 T 21-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APL_RS05790 27311c7dfba60a8473a13786a80a1503 243 PANTHER PTHR30060 1 239 3.3E-104 T 21-04-2016 APL_RS05790 27311c7dfba60a8473a13786a80a1503 243 Pfam PF03741 Integral membrane protein TerC family 15 204 3.9E-49 T 21-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APL_RS05790 27311c7dfba60a8473a13786a80a1503 243 PANTHER PTHR30060:SF1 1 239 3.3E-104 T 21-04-2016 APL_RS10580 53d6fa21b5ad2ae6e246eb528e25dbc5 283 Pfam PF01734 Patatin-like phospholipase 5 168 1.8E-16 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APL_RS10580 53d6fa21b5ad2ae6e246eb528e25dbc5 283 PANTHER PTHR14226 2 281 2.6E-72 T 21-04-2016 APL_RS10580 53d6fa21b5ad2ae6e246eb528e25dbc5 283 PANTHER PTHR14226:SF25 2 281 2.6E-72 T 21-04-2016 APL_RS10580 53d6fa21b5ad2ae6e246eb528e25dbc5 283 SUPERFAMILY SSF52151 1 271 2.04E-43 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 PANTHER PTHR22762:SF7 1 439 1.2E-162 T 21-04-2016 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 Pfam PF17137 Domain of unknown function (DUF5110) 361 427 1.1E-9 T 21-04-2016 IPR033403 Domain of unknown function DUF5110 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 Pfam PF01055 Glycosyl hydrolases family 31 2 343 9.0E-95 T 21-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 PANTHER PTHR22762 1 439 1.2E-162 T 21-04-2016 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 SUPERFAMILY SSF51011 258 338 2.09E-19 T 21-04-2016 APL_RS05340 453121cbfc60c543044b075c9e98477a 456 SUPERFAMILY SSF51445 6 253 4.74E-55 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily APL_RS04545 867ea3f8d0bef22a2d3c79a2a4ed4534 430 Pfam PF03606 C4-dicarboxylate anaerobic carrier 56 425 7.4E-30 T 21-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 APL_RS04545 867ea3f8d0bef22a2d3c79a2a4ed4534 430 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 422 1.1E-112 T 21-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 APL_RS04545 867ea3f8d0bef22a2d3c79a2a4ed4534 430 PANTHER PTHR42002 1 430 3.6E-120 T 21-04-2016 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 Hamap MF_01221 UPF0210 protein . 3 451 52.754 T 21-04-2016 IPR007841 Uncharacterised protein family UPF0210 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 Pfam PF05167 Uncharacterised ACR (DUF711) 14 415 1.3E-173 T 21-04-2016 IPR007841 Uncharacterised protein family UPF0210 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 PANTHER PTHR37560 2 451 9.6E-209 T 21-04-2016 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 SUPERFAMILY SSF51998 4 446 2.11E-175 T 21-04-2016 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 PANTHER PTHR37560:SF2 2 451 9.6E-209 T 21-04-2016 APL_RS07865 2c023e19c8c7eb62fa1342760068089a 451 Gene3D G3DSA:3.20.70.20 3 451 6.8E-212 T 21-04-2016 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 PIRSF PIRSF004761 1 113 1.2E-35 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 5.5E-32 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 PANTHER PTHR34535 2 112 1.5E-38 T 21-04-2016 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.049 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 21-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 6.8E-36 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APL_RS07015 c3f01727bc0152d75af3708feef53fb2 113 PANTHER PTHR34535:SF2 2 112 1.5E-38 T 21-04-2016 APL_RS08875 90bb5f0f04053f308285371829a20dad 319 PANTHER PTHR32196:SF21 6 318 2.3E-131 T 21-04-2016 APL_RS08875 90bb5f0f04053f308285371829a20dad 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 1.0E-53 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APL_RS08875 90bb5f0f04053f308285371829a20dad 319 PANTHER PTHR32196 6 318 2.3E-131 T 21-04-2016 APL_RS02600 a071fb4a52e0bf38a6ba60bc8607893a 231 Pfam PF03374 Phage antirepressor protein KilAC domain 128 226 1.5E-25 T 21-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 APL_RS02600 a071fb4a52e0bf38a6ba60bc8607893a 231 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 17 100 6.5E-15 T 21-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APL_RS01680 3337893ae873e2c2394aac184be25847 325 Pfam PF03547 Membrane transport protein 170 313 2.2E-7 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APL_RS01680 3337893ae873e2c2394aac184be25847 325 Pfam PF03547 Membrane transport protein 11 151 2.9E-9 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APL_RS01680 3337893ae873e2c2394aac184be25847 325 PANTHER PTHR31752:SF13 1 34 1.2E-48 T 21-04-2016 APL_RS01680 3337893ae873e2c2394aac184be25847 325 PANTHER PTHR31752:SF13 93 321 1.2E-48 T 21-04-2016 APL_RS01680 3337893ae873e2c2394aac184be25847 325 PANTHER PTHR31752 1 34 1.2E-48 T 21-04-2016 APL_RS01680 3337893ae873e2c2394aac184be25847 325 PANTHER PTHR31752 93 321 1.2E-48 T 21-04-2016 APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 PANTHER PTHR10108:SF877 1 179 1.9E-31 T 21-04-2016 APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 PANTHER PTHR10108:SF877 199 228 1.9E-31 T 21-04-2016 APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 Pfam PF08241 Methyltransferase domain 47 146 1.8E-16 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 PANTHER PTHR10108 199 228 1.9E-31 T 21-04-2016 APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 Gene3D G3DSA:3.40.50.150 3 223 8.9E-31 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 SUPERFAMILY SSF53335 13 249 3.92E-35 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APL_RS06100 2d0519afc3a2bea5eeb82515871d3832 251 PANTHER PTHR10108 1 179 1.9E-31 T 21-04-2016 APL_RS04445 78bfac29a33211e92f2396fbf74b6ab6 317 PANTHER PTHR30465:SF24 3 316 4.9E-98 T 21-04-2016 APL_RS04445 78bfac29a33211e92f2396fbf74b6ab6 317 PANTHER PTHR30465 3 316 4.9E-98 T 21-04-2016 APL_RS04445 78bfac29a33211e92f2396fbf74b6ab6 317 Gene3D G3DSA:1.10.3720.10 93 307 1.2E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04445 78bfac29a33211e92f2396fbf74b6ab6 317 SUPERFAMILY SSF161098 93 300 1.96E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS04445 78bfac29a33211e92f2396fbf74b6ab6 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 315 4.6E-37 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS08845 a54cd9e244e4449e4b26d1d5d7831e5a 449 Pfam PF02447 GntP family permease 1 446 6.0E-123 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APL_RS08845 a54cd9e244e4449e4b26d1d5d7831e5a 449 PIRSF PIRSF002746 1 449 1.6E-146 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APL_RS08845 a54cd9e244e4449e4b26d1d5d7831e5a 449 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 2 448 3.5E-112 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APL_RS08845 a54cd9e244e4449e4b26d1d5d7831e5a 449 PANTHER PTHR30354 1 449 4.9E-207 T 21-04-2016 APL_RS08845 a54cd9e244e4449e4b26d1d5d7831e5a 449 PANTHER PTHR30354:SF2 1 449 4.9E-207 T 21-04-2016 APL_RS02625 d4a9439db93794cef9b6ce8933787df5 122 Gene3D G3DSA:3.30.1330.70 4 121 3.7E-31 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APL_RS02625 d4a9439db93794cef9b6ce8933787df5 122 SUPERFAMILY SSF103084 4 119 3.92E-23 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APL_RS02625 d4a9439db93794cef9b6ce8933787df5 122 PIRSF PIRSF001007 2 122 2.2E-33 T 21-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APL_RS02625 d4a9439db93794cef9b6ce8933787df5 122 Pfam PF05866 Endodeoxyribonuclease RusA 10 100 1.1E-14 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APL_RS01420 257efb9de8cd003bd4ef54f0eafe43b6 221 PANTHER PTHR23291 12 221 1.4E-98 T 21-04-2016 IPR006214 Bax inhibitor 1-related APL_RS01420 257efb9de8cd003bd4ef54f0eafe43b6 221 PANTHER PTHR23291:SF37 12 221 1.4E-98 T 21-04-2016 APL_RS01420 257efb9de8cd003bd4ef54f0eafe43b6 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 214 4.1E-40 T 21-04-2016 APL_RS03435 5d6b449c894d0fa252312494da136644 138 Pfam PF04386 Stringent starvation protein B 4 132 3.9E-30 T 21-04-2016 IPR007481 Stringent starvation protein B APL_RS03435 5d6b449c894d0fa252312494da136644 138 PIRSF PIRSF005276 1 138 1.2E-53 T 21-04-2016 IPR007481 Stringent starvation protein B APL_RS03435 5d6b449c894d0fa252312494da136644 138 SUPERFAMILY SSF101738 1 109 1.44E-42 T 21-04-2016 IPR007481 Stringent starvation protein B APL_RS03435 5d6b449c894d0fa252312494da136644 138 PANTHER PTHR37486 1 138 9.1E-50 T 21-04-2016 APL_RS03435 5d6b449c894d0fa252312494da136644 138 PANTHER PTHR37486:SF1 1 138 9.1E-50 T 21-04-2016 APL_RS03435 5d6b449c894d0fa252312494da136644 138 Gene3D G3DSA:2.30.30.220 1 106 9.9E-42 T 21-04-2016 IPR007481 Stringent starvation protein B APL_RS08330 e1c554ce18d702a1f15c7ae59e3ca86f 547 SUPERFAMILY SSF56925 211 304 6.2E-31 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS08330 e1c554ce18d702a1f15c7ae59e3ca86f 547 Pfam PF01298 Transferrin binding protein-like solute binding protein 24 544 1.1E-158 T 21-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 APL_RS08330 e1c554ce18d702a1f15c7ae59e3ca86f 547 SUPERFAMILY SSF56925 120 177 6.2E-31 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS08330 e1c554ce18d702a1f15c7ae59e3ca86f 547 SUPERFAMILY SSF56925 369 543 5.34E-38 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 Gene3D G3DSA:3.40.50.300 18 229 2.0E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 SUPERFAMILY SSF52540 12 233 1.4E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 Pfam PF00005 ABC transporter 35 163 1.1E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 SMART SM00382 44 214 4.7E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 PANTHER PTHR24220 21 257 4.7E-115 T 21-04-2016 APL_RS02345 9f2fb3721109a0eab043898a1b8b65bc 266 PANTHER PTHR24220:SF466 21 257 4.7E-115 T 21-04-2016 APL_RS09875 f451edb555e006fc2d0089f50b2b8040 413 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 404 7.3E-143 T 21-04-2016 IPR005219 Conserved hypothetical protein CHP00155 APL_RS09875 f451edb555e006fc2d0089f50b2b8040 413 PANTHER PTHR30462:SF1 2 410 2.9E-154 T 21-04-2016 APL_RS09875 f451edb555e006fc2d0089f50b2b8040 413 Pfam PF04403 Paraquat-inducible protein A 48 197 1.8E-38 T 21-04-2016 IPR007498 Paraquat-inducible protein A APL_RS09875 f451edb555e006fc2d0089f50b2b8040 413 Pfam PF04403 Paraquat-inducible protein A 250 404 5.8E-42 T 21-04-2016 IPR007498 Paraquat-inducible protein A APL_RS09875 f451edb555e006fc2d0089f50b2b8040 413 PANTHER PTHR30462 2 410 2.9E-154 T 21-04-2016 APL_RS05095 707027c0325fb8cd1f977f2d3eb371f6 183 PANTHER PTHR36917 1 183 8.3E-64 T 21-04-2016 APL_RS05095 707027c0325fb8cd1f977f2d3eb371f6 183 Pfam PF04279 Intracellular septation protein A 1 175 2.6E-60 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APL_RS05095 707027c0325fb8cd1f977f2d3eb371f6 183 PANTHER PTHR36917:SF1 1 183 8.3E-64 T 21-04-2016 APL_RS05095 707027c0325fb8cd1f977f2d3eb371f6 183 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 16.926 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APL_RS05095 707027c0325fb8cd1f977f2d3eb371f6 183 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 4.0E-61 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APL_RS09205 d3eafe07ba1a86e7f602443ed163371d 216 Pfam PF09968 Uncharacterized protein domain (DUF2202) 49 208 1.7E-74 T 21-04-2016 IPR019243 Domain of unknown function DUF2202 APL_RS09205 d3eafe07ba1a86e7f602443ed163371d 216 Gene3D G3DSA:1.20.1260.10 50 187 1.4E-8 T 21-04-2016 IPR012347 Ferritin-related APL_RS09205 d3eafe07ba1a86e7f602443ed163371d 216 SUPERFAMILY SSF47240 50 189 1.08E-11 T 21-04-2016 IPR009078 Ferritin-like superfamily APL_RS06760 d7b31bde208580b7136d19d9312f97d7 117 Gene3D G3DSA:3.30.750.24 9 106 2.8E-13 T 21-04-2016 IPR002645 STAS domain APL_RS06760 d7b31bde208580b7136d19d9312f97d7 117 PANTHER PTHR35849:SF1 4 117 8.4E-22 T 21-04-2016 APL_RS06760 d7b31bde208580b7136d19d9312f97d7 117 SUPERFAMILY SSF52091 7 106 7.65E-17 T 21-04-2016 IPR002645 STAS domain APL_RS06760 d7b31bde208580b7136d19d9312f97d7 117 PANTHER PTHR35849 4 117 8.4E-22 T 21-04-2016 APL_RS06760 d7b31bde208580b7136d19d9312f97d7 117 Pfam PF13466 STAS domain 20 99 3.9E-16 T 21-04-2016 IPR002645 STAS domain APL_RS05055 3ce774dceca228fef46e79334fd519ab 155 Pfam PF10675 Protein of unknown function (DUF2489) 14 144 9.5E-45 T 21-04-2016 IPR019617 Domain of unknown function DUF2489 APL_RS08250 a90d669bd0871d48a3b548a799414797 292 Gene3D G3DSA:3.30.1890.10 30 253 5.2E-59 T 21-04-2016 APL_RS08250 a90d669bd0871d48a3b548a799414797 292 SUPERFAMILY SSF160355 31 253 4.97E-36 T 21-04-2016 APL_RS08925 b93c676be284d2503f40b5a9ae9be70f 563 Pfam PF10592 AIPR protein 247 536 5.1E-50 T 21-04-2016 IPR018891 Abortive bacteriophage infection, resistance APL_RS00550 577f6dd11372ac90a634d2ef2a85773b 409 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 399 2.8E-121 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APL_RS00550 577f6dd11372ac90a634d2ef2a85773b 409 PANTHER PTHR11119 4 403 2.5E-168 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS00550 577f6dd11372ac90a634d2ef2a85773b 409 Pfam PF00860 Permease family 11 376 3.8E-99 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APL_RS00550 577f6dd11372ac90a634d2ef2a85773b 409 PANTHER PTHR11119:SF49 4 403 2.5E-168 T 21-04-2016 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 Pfam PF03275 UDP-galactopyranose mutase 147 346 8.2E-80 T 21-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 SUPERFAMILY SSF54373 245 313 1.24E-25 T 21-04-2016 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 Gene3D G3DSA:3.40.50.720 182 254 1.8E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 Gene3D G3DSA:3.40.50.720 4 79 1.8E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 Gene3D G3DSA:3.40.50.720 321 365 1.8E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 73 6.8E-17 T 21-04-2016 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 2 363 3.7E-98 T 21-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 SUPERFAMILY SSF51971 1 262 1.18E-49 T 21-04-2016 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 SUPERFAMILY SSF51971 331 370 1.18E-49 T 21-04-2016 APL_RS07740 37de75a755fea3b3a6e32c710cb1fabd 382 PANTHER PTHR21197 1 382 2.9E-100 T 21-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APL_RS09200 dbf749e01dde3915797a7d5d8ae1c2ab 138 Pfam PF04224 Protein of unknown function, DUF417 2 136 1.6E-24 T 21-04-2016 IPR007339 Protein of unknown function DUF417 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.141 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 SUPERFAMILY SSF53697 2 189 2.04E-52 T 21-04-2016 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 PANTHER PTHR30390:SF6 2 193 7.3E-91 T 21-04-2016 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.5E-84 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 PANTHER PTHR30390 2 193 7.3E-91 T 21-04-2016 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 Pfam PF13580 SIS domain 12 146 8.8E-30 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APL_RS04180 da1a8bf905b5b55693b63e409ba77905 194 Gene3D G3DSA:3.40.50.10490 2 188 1.1E-62 T 21-04-2016 APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 Pfam PF02976 DNA mismatch repair enzyme MutH 55 153 9.0E-36 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 SMART SM00927 55 153 1.9E-67 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 136.832 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 SUPERFAMILY SSF52980 7 222 1.88E-80 T 21-04-2016 IPR011335 Restriction endonuclease type II-like APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 Gene3D G3DSA:3.40.600.10 8 222 3.5E-76 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APL_RS05785 2e66eface1b1ad198603861cd4d16761 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 8 221 1.1E-100 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 302 7.6E-14 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 PANTHER PTHR30425:SF1 18 317 2.7E-144 T 21-04-2016 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 Gene3D G3DSA:1.10.3720.10 26 314 3.3E-36 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 310 5.9E-91 T 21-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 SUPERFAMILY SSF161098 28 302 2.62E-32 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APL_RS06575 011b5d2ed63651b538a63e102af54a67 317 PANTHER PTHR30425 18 317 2.7E-144 T 21-04-2016 APL_RS09715 995fc60580b60094a62c0022263d2ba4 121 SUPERFAMILY SSF88723 4 118 3.08E-22 T 21-04-2016 IPR029060 PIN domain-like APL_RS09715 995fc60580b60094a62c0022263d2ba4 121 Gene3D G3DSA:3.40.50.1010 6 110 9.3E-15 T 21-04-2016 IPR029060 PIN domain-like APL_RS09715 995fc60580b60094a62c0022263d2ba4 121 Pfam PF01850 PIN domain 5 109 3.1E-9 T 21-04-2016 IPR002716 PIN domain APL_RS09715 995fc60580b60094a62c0022263d2ba4 121 PANTHER PTHR33653:SF1 1 119 7.7E-15 T 21-04-2016 APL_RS09715 995fc60580b60094a62c0022263d2ba4 121 PANTHER PTHR33653 1 119 7.7E-15 T 21-04-2016 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 Pfam PF00471 Ribosomal protein L33 8 54 2.5E-19 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 SUPERFAMILY SSF57829 3 54 4.52E-20 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 21-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 PANTHER PTHR15238 1 56 1.7E-24 T 21-04-2016 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 15.257 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS10445 5c079e9e991f28e37eeabdfa864ed390 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.4E-28 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 Pfam PF08496 Peptidase family S49 N-terminal 4 160 5.8E-54 T 21-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 Gene3D G3DSA:3.90.226.10 101 207 1.2E-34 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 Gene3D G3DSA:3.90.226.10 273 310 1.2E-34 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 PANTHER PTHR33209:SF2 4 351 4.6E-173 T 21-04-2016 APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 SUPERFAMILY SSF52096 103 211 7.56E-32 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 SUPERFAMILY SSF52096 242 301 7.56E-32 T 21-04-2016 IPR029045 ClpP/crotonase-like domain APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 PANTHER PTHR33209 4 351 4.6E-173 T 21-04-2016 APL_RS00040 3c0cd13b62336a38d2333618787fad0e 351 Pfam PF01343 Peptidase family S49 164 312 1.4E-49 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 Pfam PF00849 RNA pseudouridylate synthase 13 156 3.0E-27 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 PANTHER PTHR11079:SF62 7 204 5.1E-63 T 21-04-2016 APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 SUPERFAMILY SSF55120 5 196 4.96E-50 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 5 208 2.1E-91 T 21-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- APL_RS01170 995011ed714e55b0ce43ac03c8051c96 216 PANTHER PTHR11079 7 204 5.1E-63 T 21-04-2016 APL_RS01020 6cb293460813ee2496af5891f9de7ea5 134 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 65 127 7.0E-16 T 21-04-2016 APL_RS04910 1fd3bbe188ef43df45e1016ed42861ce 219 Pfam PF04301 Protein of unknown function (DUF452) 2 215 1.9E-79 T 21-04-2016 IPR007398 Protein of unknown function DUF452 APL_RS04910 1fd3bbe188ef43df45e1016ed42861ce 219 Gene3D G3DSA:3.40.50.1820 160 218 1.3E-4 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04910 1fd3bbe188ef43df45e1016ed42861ce 219 Gene3D G3DSA:3.40.50.1820 53 118 1.3E-4 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04910 1fd3bbe188ef43df45e1016ed42861ce 219 SUPERFAMILY SSF53474 145 215 3.02E-5 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS04910 1fd3bbe188ef43df45e1016ed42861ce 219 SUPERFAMILY SSF53474 14 95 3.02E-5 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS01870 6c505bf4c896bcc249b43292422a9676 290 Pfam PF04393 Protein of unknown function (DUF535) 22 286 4.8E-83 T 21-04-2016 IPR007488 Protein of unknown function DUF535 APL_RS01870 6c505bf4c896bcc249b43292422a9676 290 PANTHER PTHR38785 24 290 1.3E-63 T 21-04-2016 APL_RS05090 76fbe9b7e63a160249e80f635089bcb1 163 PANTHER PTHR11049 6 133 1.8E-65 T 21-04-2016 APL_RS05090 76fbe9b7e63a160249e80f635089bcb1 163 Pfam PF03061 Thioesterase superfamily 29 101 4.5E-18 T 21-04-2016 IPR006683 Thioesterase domain APL_RS05090 76fbe9b7e63a160249e80f635089bcb1 163 Gene3D G3DSA:3.10.129.10 9 146 6.0E-43 T 21-04-2016 IPR029069 HotDog domain APL_RS05090 76fbe9b7e63a160249e80f635089bcb1 163 PANTHER PTHR11049:SF5 6 133 1.8E-65 T 21-04-2016 APL_RS05090 76fbe9b7e63a160249e80f635089bcb1 163 SUPERFAMILY SSF54637 11 141 7.95E-38 T 21-04-2016 IPR029069 HotDog domain APL_RS03935 fd79fe9220c3b66f685ab727f5d6776f 92 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 11 88 1.6E-23 T 21-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 Gene3D G3DSA:3.20.20.70 1 226 3.6E-68 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 PANTHER PTHR35039:SF2 1 225 1.3E-90 T 21-04-2016 APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 SUPERFAMILY SSF51366 1 225 7.07E-34 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 213 1.5E-26 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 PANTHER PTHR35039 1 225 1.3E-90 T 21-04-2016 APL_RS09010 f874ecffc26b9b6c154f94e1674f4db1 226 SMART SM00934 5 217 2.8E-29 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APL_RS03840 a7d072fb063283c7e693da497f607ee0 96 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 5.3E-17 T 21-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 APL_RS03840 a7d072fb063283c7e693da497f607ee0 96 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.126 T 21-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 APL_RS06430 7b7713248a821f1a2e6e7da2a81d929c 65 ProDom PD052088 HI1257 10 53 6.0E-5 T 21-04-2016 APL_RS02695 790428a9e7cd8903f28738dde76c1723 218 Gene3D G3DSA:2.40.30.20 20 76 2.6E-6 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 SUPERFAMILY SSF89447 1 134 7.85E-43 T 21-04-2016 APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 52.17 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 PANTHER PTHR34701 2 151 2.3E-56 T 21-04-2016 APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 Pfam PF02381 MraZ protein, putative antitoxin-like 80 134 6.7E-19 T 21-04-2016 IPR020603 MraZ domain APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.4E-20 T 21-04-2016 IPR020603 MraZ domain APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 1.1E-55 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APL_RS00045 fc22b9792319b9f3674fbb3177461515 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 131 4.0E-54 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APL_RS03175 528288498b14f4ce1d34fca02eacfc2f 256 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 254 8.3E-107 T 21-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 APL_RS03175 528288498b14f4ce1d34fca02eacfc2f 256 PIRSF PIRSF029037 1 256 1.9E-97 T 21-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 APL_RS06010 8862640d07f230e21019871082ff361b 149 SUPERFAMILY SSF103247 27 146 8.24E-28 T 21-04-2016 IPR005180 Domain of unknown function DUF302 APL_RS06010 8862640d07f230e21019871082ff361b 149 Pfam PF03625 Domain of unknown function DUF302 56 115 3.2E-15 T 21-04-2016 IPR005180 Domain of unknown function DUF302 APL_RS06010 8862640d07f230e21019871082ff361b 149 Gene3D G3DSA:3.30.310.70 29 149 2.8E-31 T 21-04-2016 IPR005180 Domain of unknown function DUF302 APL_RS01210 75344a65bcfa2000d62d79e3492e9062 124 Pfam PF04170 NlpE N-terminal domain 28 111 4.7E-19 T 21-04-2016 IPR007298 Copper resistance lipoprotein NlpE APL_RS02665 02c87d676d7427e29e672be31f93b0a4 506 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 34 477 1.2E-132 T 21-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APL_RS02665 02c87d676d7427e29e672be31f93b0a4 506 Pfam PF05136 Phage portal protein, lambda family 36 373 6.3E-91 T 21-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APL_RS10865 cda44ed1849873f9334300f460d6f2d0 259 Pfam PF01757 Acyltransferase family 13 252 3.2E-14 T 21-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APL_RS03265 290faf62f32a786f5f441f49b380fa87 72 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 72 16.918 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APL_RS03265 290faf62f32a786f5f441f49b380fa87 72 Pfam PF06005 Protein of unknown function (DUF904) 1 70 7.9E-22 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APL_RS04730 1f0f3760bffcb1cc8248b0b6f7adf658 112 Pfam PF04126 Cyclophilin-like 2 79 8.0E-8 T 21-04-2016 IPR025658 Cyclophilin TM1367-like domain APL_RS04730 1f0f3760bffcb1cc8248b0b6f7adf658 112 SUPERFAMILY SSF50891 1 111 1.82E-19 T 21-04-2016 IPR029000 Cyclophilin-like domain APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 Pfam PF00209 Sodium:neurotransmitter symporter family 8 132 3.6E-23 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 Pfam PF00209 Sodium:neurotransmitter symporter family 161 451 3.0E-33 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 SUPERFAMILY SSF161070 8 452 1.44E-123 T 21-04-2016 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 PANTHER PTHR11616 3 452 2.9E-152 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 PANTHER PTHR11616:SF167 3 452 2.9E-152 T 21-04-2016 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 263 283 3.6E-12 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 3.6E-12 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00980 d1d08f3ab8029c665f095c7e4155f075 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 3.6E-12 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APL_RS00245 2861863a573a64dd704636fc3df07645 172 SUPERFAMILY SSF56925 28 172 3.4E-17 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS00245 2861863a573a64dd704636fc3df07645 172 Pfam PF13505 Outer membrane protein beta-barrel domain 6 172 4.4E-22 T 21-04-2016 IPR027385 Outer membrane protein beta-barrel APL_RS00245 2861863a573a64dd704636fc3df07645 172 Gene3D G3DSA:2.40.160.20 29 172 3.5E-15 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS09900 c080732a563f691143ed5c1651f419fe 300 SUPERFAMILY SSF53850 88 295 2.17E-24 T 21-04-2016 APL_RS09900 c080732a563f691143ed5c1651f419fe 300 SUPERFAMILY SSF46785 6 82 7.88E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09900 c080732a563f691143ed5c1651f419fe 300 Pfam PF03466 LysR substrate binding domain 87 290 6.1E-20 T 21-04-2016 IPR005119 LysR, substrate-binding APL_RS09900 c080732a563f691143ed5c1651f419fe 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.1E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APL_RS09900 c080732a563f691143ed5c1651f419fe 300 PANTHER PTHR30537 1 296 1.7E-46 T 21-04-2016 APL_RS09900 c080732a563f691143ed5c1651f419fe 300 Gene3D G3DSA:3.40.190.10 108 174 1.6E-8 T 21-04-2016 APL_RS09900 c080732a563f691143ed5c1651f419fe 300 Gene3D G3DSA:1.10.10.10 5 81 5.9E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS09900 c080732a563f691143ed5c1651f419fe 300 Gene3D G3DSA:3.40.190.10 175 259 3.2E-12 T 21-04-2016 APL_RS10480 3db8ccb599f2699dbae27cce0614a7ff 110 Pfam PF04219 Protein of unknown function, DUF 10 97 8.4E-35 T 21-04-2016 IPR007335 Protein of unknown function DUF413 APL_RS02595 851fea4ce6d7b5e5b9fcb33015f7c8ec 62 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 60 1.9E-28 T 21-04-2016 APL_RS02595 851fea4ce6d7b5e5b9fcb33015f7c8ec 62 SUPERFAMILY SSF47413 1 58 6.19E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS02595 851fea4ce6d7b5e5b9fcb33015f7c8ec 62 Gene3D G3DSA:1.10.260.40 1 59 3.5E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.585 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 SUPERFAMILY SSF117130 1 52 1.07E-20 T 21-04-2016 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 6.0E-18 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 PANTHER PTHR34984 1 53 6.9E-30 T 21-04-2016 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 PANTHER PTHR34984:SF1 1 53 6.9E-30 T 21-04-2016 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 Pfam PF02599 Global regulator protein family 1 52 5.3E-28 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APL_RS03415 9f4b41122f6f37ead13d8128c2583513 64 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.5E-29 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APL_RS01535 44b9c270722e9c20fed93143b04d331a 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 2 93 1.4E-30 T 21-04-2016 IPR011846 Cyd operon protein YbgE APL_RS01535 44b9c270722e9c20fed93143b04d331a 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 9.1E-22 T 21-04-2016 IPR011846 Cyd operon protein YbgE APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 PANTHER PTHR10681:SF107 1 179 1.7E-65 T 21-04-2016 APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 SUPERFAMILY SSF52833 45 177 5.45E-33 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 Gene3D G3DSA:3.40.30.10 9 178 6.4E-37 T 21-04-2016 IPR012336 Thioredoxin-like fold APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 Pfam PF08534 Redoxin 40 163 8.6E-20 T 21-04-2016 IPR013740 Redoxin GO:0016491 APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 177 6.4E-75 T 21-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APL_RS08000 c13dbb55901be4885dfb0af6dce64265 180 PANTHER PTHR10681 1 179 1.7E-65 T 21-04-2016 APL_RS06590 d0e68287e6dc308b609920d665fcd638 150 Pfam PF04214 Protein of unknown function, DUF 59 120 1.2E-26 T 21-04-2016 IPR007332 Protein of unknown function DUF411 APL_RS05505 d93854c4fae128d11c71cb259eab67b1 842 PIRSF PIRSF001444 28 841 1.3E-278 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APL_RS05505 d93854c4fae128d11c71cb259eab67b1 842 Pfam PF01295 Adenylate cyclase, class-I 244 829 9.3E-239 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APL_RS05505 d93854c4fae128d11c71cb259eab67b1 842 PANTHER PTHR38760 27 840 8.8E-253 T 21-04-2016 APL_RS05505 d93854c4fae128d11c71cb259eab67b1 842 Pfam PF12633 Adenylate cyclase NT domain 35 224 2.2E-70 T 21-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 APL_RS01525 8e30076c2656b4181d190e11a0568c5a 516 PANTHER PTHR30365 376 516 8.6E-248 T 21-04-2016 APL_RS01525 8e30076c2656b4181d190e11a0568c5a 516 PANTHER PTHR30365 1 310 8.6E-248 T 21-04-2016 APL_RS01525 8e30076c2656b4181d190e11a0568c5a 516 PANTHER PTHR30365:SF0 376 516 8.6E-248 T 21-04-2016 APL_RS01525 8e30076c2656b4181d190e11a0568c5a 516 PANTHER PTHR30365:SF0 1 310 8.6E-248 T 21-04-2016 APL_RS01525 8e30076c2656b4181d190e11a0568c5a 516 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 5.4E-172 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 SUPERFAMILY SSF51351 3 251 1.14E-88 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 Pfam PF00121 Triosephosphate isomerase 6 248 7.5E-90 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 21-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 Gene3D G3DSA:3.20.20.70 3 253 1.9E-101 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 40.147 T 21-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 241 9.8E-87 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS10220 cff4b238a054d58cc8f49b7e097fcb0a 256 PANTHER PTHR21139 1 256 1.7E-126 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APL_RS02840 993229d950a1872a93a7dcdcd0305538 152 PANTHER PTHR20858:SF17 1 147 1.0E-44 T 21-04-2016 APL_RS02840 993229d950a1872a93a7dcdcd0305538 152 Gene3D G3DSA:3.40.1190.20 2 145 1.9E-47 T 21-04-2016 IPR029056 Ribokinase-like APL_RS02840 993229d950a1872a93a7dcdcd0305538 152 PANTHER PTHR20858 1 147 1.0E-44 T 21-04-2016 APL_RS02840 993229d950a1872a93a7dcdcd0305538 152 Pfam PF08543 Phosphomethylpyrimidine kinase 2 147 5.2E-47 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APL_RS02840 993229d950a1872a93a7dcdcd0305538 152 SUPERFAMILY SSF53613 2 139 1.5E-40 T 21-04-2016 IPR029056 Ribokinase-like APL_RS08125 109c68b64c86b376f023c45792ccfff9 155 Gene3D G3DSA:3.40.630.30 14 142 9.5E-14 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS08125 109c68b64c86b376f023c45792ccfff9 155 Pfam PF13508 Acetyltransferase (GNAT) domain 40 142 1.3E-7 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS08125 109c68b64c86b376f023c45792ccfff9 155 PANTHER PTHR36449 1 153 5.2E-41 T 21-04-2016 APL_RS08125 109c68b64c86b376f023c45792ccfff9 155 SUPERFAMILY SSF55729 11 144 2.34E-13 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS03950 4e9f3ddb9faf33bd7ceb5a6414899874 228 Pfam PF04172 LrgB-like family 9 221 1.1E-67 T 21-04-2016 IPR007300 CidB/LrgB family APL_RS03950 4e9f3ddb9faf33bd7ceb5a6414899874 228 PANTHER PTHR30249 1 222 4.0E-80 T 21-04-2016 APL_RS03950 4e9f3ddb9faf33bd7ceb5a6414899874 228 PANTHER PTHR30249:SF5 1 222 4.0E-80 T 21-04-2016 APL_RS10685 4ccfcf750d1f88ad7e4136d89d062684 105 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 101 1.0E-39 T 21-04-2016 IPR016755 Uncharacterised conserved protein UCP019302 APL_RS10685 4ccfcf750d1f88ad7e4136d89d062684 105 PIRSF PIRSF019302 1 105 1.9E-42 T 21-04-2016 IPR016755 Uncharacterised conserved protein UCP019302 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 PANTHER PTHR34475:SF1 3 322 8.8E-31 T 21-04-2016 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 Pfam PF13464 Domain of unknown function (DUF4115) 252 318 1.6E-10 T 21-04-2016 IPR025194 Domain of unknown function DUF4115 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 SUPERFAMILY SSF47413 13 53 9.85E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 Gene3D G3DSA:1.10.260.40 8 51 6.9E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 PANTHER PTHR34475 3 322 8.8E-31 T 21-04-2016 APL_RS06160 83a0d5b41045cb1c98c17a7c4f8eb962 322 Pfam PF13413 Helix-turn-helix domain 20 78 4.7E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APL_RS03705 a66b8b6f83150199c8542ddc931f0bef 149 PANTHER PTHR30455:SF2 2 149 1.8E-65 T 21-04-2016 APL_RS03705 a66b8b6f83150199c8542ddc931f0bef 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.6E-69 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APL_RS03705 a66b8b6f83150199c8542ddc931f0bef 149 PANTHER PTHR30455 2 149 1.8E-65 T 21-04-2016 APL_RS03705 a66b8b6f83150199c8542ddc931f0bef 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 83.249 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APL_RS03705 a66b8b6f83150199c8542ddc931f0bef 149 Pfam PF03477 ATP cone domain 50 135 6.7E-13 T 21-04-2016 IPR005144 ATP-cone domain APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.17 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 PANTHER PTHR30341:SF0 1 394 1.8E-186 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 Pfam PF06965 Na+/H+ antiporter 1 7 382 1.4E-145 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 Gene3D G3DSA:1.20.1530.10 3 387 6.5E-154 T 21-04-2016 IPR023171 Na/H antiporter domain APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 PANTHER PTHR30341 1 394 1.8E-186 T 21-04-2016 APL_RS10325 9c3e2b29398a062f71b7ac476a4bb6ef 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 382 3.6E-167 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APL_RS02675 8fd7313161e3a06d870863a26f794dcb 107 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 105 5.2E-29 T 21-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APL_RS02675 8fd7313161e3a06d870863a26f794dcb 107 PIRSF PIRSF030771 1 107 6.7E-29 T 21-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APL_RS05880 8c54ed70662f77411a4e0c5b922ec39b 350 Pfam PF01594 Domain of unknown function DUF20 12 329 1.6E-64 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like APL_RS05880 8c54ed70662f77411a4e0c5b922ec39b 350 PANTHER PTHR21716 9 346 4.3E-151 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like APL_RS05880 8c54ed70662f77411a4e0c5b922ec39b 350 PANTHER PTHR21716:SF17 9 346 4.3E-151 T 21-04-2016 APL_RS10660 58477cedbc3acca3c0ac1b83cd88b365 189 PANTHER PTHR30178:SF6 9 188 2.3E-60 T 21-04-2016 APL_RS10660 58477cedbc3acca3c0ac1b83cd88b365 189 PANTHER PTHR30178 9 188 2.3E-60 T 21-04-2016 APL_RS10660 58477cedbc3acca3c0ac1b83cd88b365 189 Pfam PF01184 GPR1/FUN34/yaaH family 7 176 1.3E-43 T 21-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 PANTHER PTHR22572:SF118 2 289 4.3E-137 T 21-04-2016 APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 Pfam PF00483 Nucleotidyl transferase 3 269 7.9E-27 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 PANTHER PTHR22572 2 289 4.3E-137 T 21-04-2016 APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 1.7E-116 T 21-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 SUPERFAMILY SSF53448 1 281 3.38E-62 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS03405 28b2b24f63e302a6edeb06bffa26027a 295 Gene3D G3DSA:3.90.550.10 1 280 1.7E-70 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APL_RS02195 a946d2805a3c80db4dacea46e726d0b2 114 PANTHER PTHR37482 1 114 2.0E-39 T 21-04-2016 APL_RS02195 a946d2805a3c80db4dacea46e726d0b2 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 111 28.933 T 21-04-2016 IPR026592 Outer membrane protein assembly factor BamE APL_RS02195 a946d2805a3c80db4dacea46e726d0b2 114 Pfam PF04355 SmpA / OmlA family 34 103 1.7E-27 T 21-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APL_RS02195 a946d2805a3c80db4dacea46e726d0b2 114 PANTHER PTHR37482:SF1 1 114 2.0E-39 T 21-04-2016 APL_RS03160 5a775aac0209583098a66cac06fe0fb5 260 Pfam PF03883 Protein of unknown function (DUF328) 1 245 4.1E-86 T 21-04-2016 IPR005583 Peroxide stress protein YaaA APL_RS03160 5a775aac0209583098a66cac06fe0fb5 260 PANTHER PTHR30283 2 257 8.8E-107 T 21-04-2016 APL_RS03160 5a775aac0209583098a66cac06fe0fb5 260 PANTHER PTHR30283:SF3 2 257 8.8E-107 T 21-04-2016 APL_RS03160 5a775aac0209583098a66cac06fe0fb5 260 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 35.816 T 21-04-2016 IPR005583 Peroxide stress protein YaaA APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 Gene3D G3DSA:3.40.109.10 5 220 4.8E-79 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 SUPERFAMILY SSF55469 8 219 6.41E-58 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 PANTHER PTHR23026 6 114 1.1E-78 T 21-04-2016 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 PANTHER PTHR23026 131 220 1.1E-78 T 21-04-2016 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 PANTHER PTHR23026:SF101 6 114 1.1E-78 T 21-04-2016 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 PANTHER PTHR23026:SF101 131 220 1.1E-78 T 21-04-2016 APL_RS06265 c24524cfa26475c8de8d1a5c0d2120b5 220 Pfam PF00881 Nitroreductase family 14 199 3.7E-28 T 21-04-2016 IPR029479 Nitroreductase APL_RS08350 0660c3a820f44d62a82a7dd532eb5912 82 Pfam PF03956 Membrane protein of unknown function (DUF340) 2 79 3.4E-26 T 21-04-2016 IPR005642 Lysine exporter LysO APL_RS08350 0660c3a820f44d62a82a7dd532eb5912 82 PANTHER PTHR35804 1 82 6.8E-24 T 21-04-2016 APL_RS08350 0660c3a820f44d62a82a7dd532eb5912 82 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 1 78 2.0E-25 T 21-04-2016 IPR005642 Lysine exporter LysO APL_RS08350 0660c3a820f44d62a82a7dd532eb5912 82 PANTHER PTHR35804:SF1 1 82 6.8E-24 T 21-04-2016 APL_RS00710 9f5c36c2e2d51ebd5d12aaf9e28208ae 168 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 85 167 1.4E-8 T 21-04-2016 IPR019275 Protein of unknown function DUF2301 APL_RS08970 d403376231ab1d7d803fceb8e6648a77 213 Pfam PF07274 Protein of unknown function (DUF1440) 26 189 2.7E-50 T 21-04-2016 IPR009898 Protein of unknown function DUF1440 APL_RS07595 616fe2336eab098eac1e35ae30ef0108 173 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 77 165 2.8E-28 T 21-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 APL_RS04965 21cd4d9374737020433d7ab43854ed88 187 Pfam PF06114 Domain of unknown function (DUF955) 43 177 2.4E-17 T 21-04-2016 IPR010359 HTH domain, IrrE-type APL_RS06510 2d97188593b3d3a7f7244683324c47e5 97 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 94 8.5E-16 T 21-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APL_RS06200 05bbd6fc9437356fbeaab636a56cf87e 214 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 150 1.7E-34 T 21-04-2016 IPR015032 MTH538 TIR-like domain APL_RS06200 05bbd6fc9437356fbeaab636a56cf87e 214 SUPERFAMILY SSF52200 21 153 5.49E-5 T 21-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 APL_RS05525 48bcd2fe0f813b3ff958f40ebbc1ee23 111 Pfam PF13276 HTH-like domain 33 86 5.2E-17 T 21-04-2016 IPR025948 HTH-like domain APL_RS05830 e296f9d6962171fbc969b8c826c15cac 156 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 5 78 3.6E-7 T 21-04-2016 IPR002654 Glycosyl transferase, family 25 APL_RS02835 52ba455c62a1bd60bf026d7b5ca42610 315 SUPERFAMILY SSF53850 28 309 6.72E-47 T 21-04-2016 APL_RS02835 52ba455c62a1bd60bf026d7b5ca42610 315 PANTHER PTHR31528:SF5 8 313 1.2E-116 T 21-04-2016 APL_RS02835 52ba455c62a1bd60bf026d7b5ca42610 315 PANTHER PTHR31528 8 313 1.2E-116 T 21-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 APL_RS02835 52ba455c62a1bd60bf026d7b5ca42610 315 Pfam PF09084 NMT1/THI5 like 35 247 1.0E-70 T 21-04-2016 IPR015168 SsuA/THI5-like APL_RS02835 52ba455c62a1bd60bf026d7b5ca42610 315 Gene3D G3DSA:3.40.190.10 111 202 1.3E-15 T 21-04-2016 APL_RS08135 f8b6b3b5f3dee2d39d7e2fdeff0d7fa1 486 PIRSF PIRSF004919 15 486 5.4E-138 T 21-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS08135 f8b6b3b5f3dee2d39d7e2fdeff0d7fa1 486 PANTHER PTHR30624:SF4 13 485 4.7E-234 T 21-04-2016 APL_RS08135 f8b6b3b5f3dee2d39d7e2fdeff0d7fa1 486 SUPERFAMILY SSF111283 18 485 9.02E-126 T 21-04-2016 APL_RS08135 f8b6b3b5f3dee2d39d7e2fdeff0d7fa1 486 PANTHER PTHR30624 13 485 4.7E-234 T 21-04-2016 APL_RS08135 f8b6b3b5f3dee2d39d7e2fdeff0d7fa1 486 Pfam PF01523 Putative modulator of DNA gyrase 34 337 2.6E-61 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APL_RS07430 2b68e2ea9768e77362589cbba36724a4 463 Pfam PF04225 Opacity-associated protein A LysM-like domain 387 462 4.1E-25 T 21-04-2016 IPR007340 Opacity-associated protein A APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 PANTHER PTHR38036:SF1 11 99 1.1E-35 T 21-04-2016 APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 Pfam PF04359 Protein of unknown function (DUF493) 19 99 4.2E-25 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 13 99 24.422 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 PANTHER PTHR38036 11 99 1.1E-35 T 21-04-2016 APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 Gene3D G3DSA:3.30.70.1460 15 99 2.0E-30 T 21-04-2016 IPR027471 YbeD-like domain APL_RS08470 e5188cb8c688e3fe99506fb83d150cda 99 SUPERFAMILY SSF117991 15 99 6.02E-26 T 21-04-2016 IPR027471 YbeD-like domain APL_RS06195 4f242d9dd1039b34561128d1b2639459 165 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 113 2.8E-28 T 21-04-2016 IPR015032 MTH538 TIR-like domain APL_RS06195 4f242d9dd1039b34561128d1b2639459 165 Gene3D G3DSA:3.40.50.9200 43 101 7.8E-9 T 21-04-2016 IPR015032 MTH538 TIR-like domain APL_RS06195 4f242d9dd1039b34561128d1b2639459 165 SUPERFAMILY SSF52206 21 101 1.57E-16 T 21-04-2016 IPR015032 MTH538 TIR-like domain APL_RS07755 0faff86f34ff54ea8d3325788696774a 257 Pfam PF14393 Domain of unknown function (DUF4422) 5 223 4.3E-90 T 21-04-2016 IPR025536 Domain of unknown function DUF4422 APL_RS05425 5e1ce5cab6a1c38c78c7377c490cd4a8 160 Pfam PF09335 SNARE associated Golgi protein 59 155 2.7E-9 T 21-04-2016 IPR032816 SNARE associated Golgi protein APL_RS05425 5e1ce5cab6a1c38c78c7377c490cd4a8 160 PANTHER PTHR30353:SF12 1 155 4.2E-41 T 21-04-2016 APL_RS05425 5e1ce5cab6a1c38c78c7377c490cd4a8 160 PANTHER PTHR30353 1 155 4.2E-41 T 21-04-2016 IPR032818 DedA family APL_RS02705 664e694f35ca33132878ef89d481a30d 91 Pfam PF13227 Protein of unknown function (DUF4035) 26 81 2.2E-26 T 21-04-2016 IPR025116 Protein of unknown function DUF4035 APL_RS09315 c889c8a325d80da89eb932f9a45674c4 197 Gene3D G3DSA:3.40.50.1110 13 195 3.5E-30 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain APL_RS09315 c889c8a325d80da89eb932f9a45674c4 197 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 187 4.0E-16 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain APL_RS09315 c889c8a325d80da89eb932f9a45674c4 197 SUPERFAMILY SSF52266 12 196 5.5E-34 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain APL_RS09945 56a1ae962875500900419e3702dcaf4c 159 Pfam PF00872 Transposase, Mutator family 6 92 7.0E-6 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS00205 c1b556766bd12a8ac868dbd14d54057b 203 Pfam PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 2 201 4.5E-88 T 21-04-2016 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial APL_RS00375 7003651f636f11e39acca81750c89583 210 Gene3D G3DSA:3.40.50.1820 96 175 1.1E-4 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS00375 7003651f636f11e39acca81750c89583 210 SUPERFAMILY SSF53474 62 183 9.84E-11 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS00375 7003651f636f11e39acca81750c89583 210 Gene3D G3DSA:3.40.50.1820 28 95 1.9E-5 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold APL_RS01215 740aa83ab3627c55f8b6baa8351a5d0a 102 Pfam PF05258 Protein of unknown function (DUF721) 9 93 7.0E-10 T 21-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 APL_RS00765 6355e36d2463f68804399768ad180330 554 PANTHER PTHR11573 52 539 1.0E-121 T 21-04-2016 APL_RS00765 6355e36d2463f68804399768ad180330 554 Gene3D G3DSA:3.20.70.20 492 530 5.1E-44 T 21-04-2016 APL_RS00765 6355e36d2463f68804399768ad180330 554 Gene3D G3DSA:3.20.70.20 49 431 5.1E-44 T 21-04-2016 APL_RS00765 6355e36d2463f68804399768ad180330 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 324 346 4.5E-13 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS00765 6355e36d2463f68804399768ad180330 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 157 176 4.5E-13 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS00765 6355e36d2463f68804399768ad180330 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 385 412 4.5E-13 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS00765 6355e36d2463f68804399768ad180330 554 TIGRFAM TIGR02510 NrdE-prime: ribonucleoside-diphosphate reductase, alpha chain 8 554 5.2E-256 T 21-04-2016 IPR013350 Ribonucleotide reductase alpha chain APL_RS00765 6355e36d2463f68804399768ad180330 554 SUPERFAMILY SSF51998 82 435 3.66E-110 T 21-04-2016 APL_RS00765 6355e36d2463f68804399768ad180330 554 SUPERFAMILY SSF51998 466 533 3.66E-110 T 21-04-2016 APL_RS00765 6355e36d2463f68804399768ad180330 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 210 376 5.4E-27 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS00765 6355e36d2463f68804399768ad180330 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 84 208 7.7E-23 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS00765 6355e36d2463f68804399768ad180330 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 381 532 4.8E-35 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APL_RS04985 cd4b991e05d6c2e80d736e21a1af4207 137 Gene3D G3DSA:1.10.10.10 62 129 9.4E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APL_RS08405 182d1a669c562ed10194c918364526d9 394 Gene3D G3DSA:3.10.560.10 248 364 2.2E-26 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 Gene3D G3DSA:3.10.560.10 169 247 3.2E-13 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 Pfam PF02563 Polysaccharide biosynthesis/export protein 87 173 4.7E-16 T 21-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APL_RS08405 182d1a669c562ed10194c918364526d9 394 Gene3D G3DSA:3.30.1950.10 89 168 9.0E-24 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 PANTHER PTHR33619:SF3 125 382 2.7E-22 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 PANTHER PTHR33619:SF3 87 105 2.7E-22 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 PANTHER PTHR33619 125 382 2.7E-22 T 21-04-2016 APL_RS08405 182d1a669c562ed10194c918364526d9 394 PANTHER PTHR33619 87 105 2.7E-22 T 21-04-2016 APL_RS02655 f553c848122fb12f631450d139def0f6 705 PANTHER PTHR34413 2 642 0.0 T 21-04-2016 APL_RS02655 f553c848122fb12f631450d139def0f6 705 Pfam PF05876 Phage terminase large subunit (GpA) 32 642 1.4E-179 T 21-04-2016 IPR008866 Bacteriophage lambda, GpA APL_RS02655 f553c848122fb12f631450d139def0f6 705 PANTHER PTHR34413:SF2 2 642 0.0 T 21-04-2016 APL_RS07005 31875472a766d555d09592f45e93f11c 137 Pfam PF11939 Protein of unknown function (DUF3457) 6 132 2.9E-37 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APL_RS07005 31875472a766d555d09592f45e93f11c 137 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 5 132 6.7E-46 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APL_RS07005 31875472a766d555d09592f45e93f11c 137 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 4 132 3.0E-50 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APL_RS02260 f893116d64938ee35634faf0ef45df98 261 PANTHER PTHR30477:SF0 2 259 2.4E-82 T 21-04-2016 APL_RS02260 f893116d64938ee35634faf0ef45df98 261 PANTHER PTHR30477 2 259 2.4E-82 T 21-04-2016 APL_RS02260 f893116d64938ee35634faf0ef45df98 261 Pfam PF00950 ABC 3 transport family 1 257 1.2E-79 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APL_RS02260 f893116d64938ee35634faf0ef45df98 261 Gene3D G3DSA:1.10.3470.10 39 260 1.6E-8 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS02260 f893116d64938ee35634faf0ef45df98 261 SUPERFAMILY SSF81345 2 257 2.35E-38 T 21-04-2016 IPR029022 ABC transporter, BtuC-like APL_RS03320 cb94bd487c63e585ba0763e6afacea5e 150 Pfam PF14355 Abortive infection C-terminus 2 77 9.1E-11 T 21-04-2016 IPR026001 Abortive infection protein-like, C-terminal domain APL_RS07460 836020c54da4d2fa70a6a479a8d9a2a9 97 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 6 97 1.0E-22 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APL_RS07460 836020c54da4d2fa70a6a479a8d9a2a9 97 Gene3D G3DSA:3.30.70.860 26 97 1.0E-23 T 21-04-2016 APL_RS07460 836020c54da4d2fa70a6a479a8d9a2a9 97 PANTHER PTHR38769:SF1 22 97 1.1E-13 T 21-04-2016 APL_RS07460 836020c54da4d2fa70a6a479a8d9a2a9 97 PANTHER PTHR38769 22 97 1.1E-13 T 21-04-2016 APL_RS07460 836020c54da4d2fa70a6a479a8d9a2a9 97 Pfam PF04175 Protein of unknown function (DUF406) 6 97 6.7E-29 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APL_RS02925 ed629519007caf47d9cf3d1a91c49850 272 Pfam PF08666 SAF domain 56 123 1.7E-6 T 21-04-2016 IPR013974 SAF domain APL_RS08605 b90f2b0ec25806f6602ae56c8c9cdb34 202 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 197 1.3E-37 T 21-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 APL_RS08605 b90f2b0ec25806f6602ae56c8c9cdb34 202 PANTHER PTHR34229 2 199 4.8E-42 T 21-04-2016 APL_RS08605 b90f2b0ec25806f6602ae56c8c9cdb34 202 PANTHER PTHR34229:SF1 2 199 4.8E-42 T 21-04-2016 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 463 3.6E-68 T 21-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 PANTHER PTHR30203 30 464 9.3E-57 T 21-04-2016 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 Pfam PF02321 Outer membrane efflux protein 63 240 2.7E-12 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 Pfam PF02321 Outer membrane efflux protein 280 461 4.7E-24 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 SUPERFAMILY SSF56954 5 464 1.06E-69 T 21-04-2016 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 Gene3D G3DSA:1.20.1600.10 134 311 6.7E-68 T 21-04-2016 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 Gene3D G3DSA:1.20.1600.10 51 87 6.7E-68 T 21-04-2016 APL_RS04400 29f718c88334e0f477e633642e5b5808 464 Gene3D G3DSA:1.20.1600.10 350 464 6.7E-68 T 21-04-2016 APL_RS10165 5573a652e5b9a23817ce0c0eb1859c6b 75 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 72 2.0E-25 T 21-04-2016 APL_RS10165 5573a652e5b9a23817ce0c0eb1859c6b 75 Pfam PF10571 Uncharacterised protein family UPF0547 4 29 5.2E-11 T 21-04-2016 IPR018886 Uncharacterised domain UPF0547 APL_RS00155 2a32f4a670b6cd2f204463e4b11508b2 155 PANTHER PTHR34980 1 153 4.2E-12 T 21-04-2016 APL_RS00155 2a32f4a670b6cd2f204463e4b11508b2 155 Pfam PF05656 Protein of unknown function (DUF805) 12 153 4.5E-22 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APL_RS08535 d026b2d53661cf870bef82a0a40b8d51 96 Pfam PF04175 Protein of unknown function (DUF406) 5 94 5.4E-35 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APL_RS08535 d026b2d53661cf870bef82a0a40b8d51 96 PANTHER PTHR38769:SF1 5 96 9.7E-27 T 21-04-2016 APL_RS08535 d026b2d53661cf870bef82a0a40b8d51 96 PANTHER PTHR38769 5 96 9.7E-27 T 21-04-2016 APL_RS08535 d026b2d53661cf870bef82a0a40b8d51 96 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 2 94 1.1E-38 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APL_RS08535 d026b2d53661cf870bef82a0a40b8d51 96 Gene3D G3DSA:3.30.70.860 23 95 2.5E-32 T 21-04-2016 APL_RS01070 d899ea91dd9c7a3b200dff95db70d83d 95 Pfam PF13276 HTH-like domain 23 76 1.7E-17 T 21-04-2016 IPR025948 HTH-like domain APL_RS03820 132a6ba8269e48a16de0951c2df38b17 149 PIRSF PIRSF009554 2 147 3.5E-48 T 21-04-2016 IPR011194 Uncharacterised protein family UPF0306 APL_RS03820 132a6ba8269e48a16de0951c2df38b17 149 SUPERFAMILY SSF50475 4 130 1.39E-11 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APL_RS10610 fbe0da3cf19a5919a2d9b69b7edb239a 487 Pfam PF13432 Tetratricopeptide repeat 123 180 4.8E-7 T 21-04-2016 APL_RS10610 fbe0da3cf19a5919a2d9b69b7edb239a 487 Pfam PF04575 Protein of unknown function (DUF560) 199 487 1.0E-111 T 21-04-2016 IPR007655 Protein of unknown function DUF560 APL_RS10610 fbe0da3cf19a5919a2d9b69b7edb239a 487 Gene3D G3DSA:1.25.40.10 117 174 2.2E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS10610 fbe0da3cf19a5919a2d9b69b7edb239a 487 SUPERFAMILY SSF48452 118 176 5.27E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 SMART SM00771 204 335 9.1E-60 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 SUPERFAMILY SSF64383 205 335 2.75E-40 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 207 333 1.2E-40 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 PANTHER PTHR38685 1 335 2.0E-43 T 21-04-2016 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 PANTHER PTHR38685:SF1 1 335 2.0E-43 T 21-04-2016 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 Hamap MF_00509 Cell division protein ZipA [zipA]. 1 336 22.813 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 Gene3D G3DSA:3.30.1400.10 205 335 5.8E-45 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 335 6.6E-51 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APL_RS06835 0c245853b8ad741777519c98b6cad8c8 336 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 207 331 3.0E-47 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APL_RS03400 53ce97815f1cb5d7314cd27d55842fa5 173 Pfam PF07445 Primosomal replication protein priC 29 171 1.1E-18 T 21-04-2016 IPR010890 Primosomal replication PriB/PriC APL_RS09060 106362cfbe6f7bc0ec3b063d9c37e00b 144 SUPERFAMILY SSF56925 6 95 1.57E-15 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS09060 106362cfbe6f7bc0ec3b063d9c37e00b 144 Pfam PF08794 Lipoprotein GNA1870 C terminal like 3 90 3.8E-8 T 21-04-2016 IPR014902 Lipoprotein GNA1870-related, C-terminal APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 SUPERFAMILY SSF103473 13 163 6.54E-30 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 SUPERFAMILY SSF103473 199 424 6.54E-30 T 21-04-2016 IPR020846 Major facilitator superfamily domain APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 Pfam PF07690 Major Facilitator Superfamily 22 358 5.7E-17 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 PANTHER PTHR23514:SF11 196 427 5.7E-218 T 21-04-2016 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 PANTHER PTHR23514:SF11 3 172 5.7E-218 T 21-04-2016 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 Gene3D G3DSA:1.20.1250.20 14 225 1.0E-12 T 21-04-2016 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 PANTHER PTHR23514 196 427 5.7E-218 T 21-04-2016 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 PANTHER PTHR23514 3 172 5.7E-218 T 21-04-2016 APL_RS08960 43b2221cd91bc33924fff4890b22d387 429 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 10 422 4.1E-191 T 21-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APL_RS09545 ea5d05936426ed5d93e1478d6ee54d5d 283 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 117 207 1.3E-8 T 21-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APL_RS09545 ea5d05936426ed5d93e1478d6ee54d5d 283 PANTHER PTHR39217 23 282 3.1E-32 T 21-04-2016 APL_RS09545 ea5d05936426ed5d93e1478d6ee54d5d 283 SUPERFAMILY SSF56059 103 278 1.02E-18 T 21-04-2016 APL_RS09545 ea5d05936426ed5d93e1478d6ee54d5d 283 Gene3D G3DSA:3.30.470.20 159 209 1.9E-5 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS08235 2b74b6ae50713335dd62810db301087c 207 Pfam PF00583 Acetyltransferase (GNAT) family 124 194 1.1E-11 T 21-04-2016 IPR000182 GNAT domain GO:0008080 APL_RS08235 2b74b6ae50713335dd62810db301087c 207 SUPERFAMILY SSF55729 30 204 4.48E-24 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS08235 2b74b6ae50713335dd62810db301087c 207 Gene3D G3DSA:3.40.630.30 64 194 8.2E-21 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase APL_RS08235 2b74b6ae50713335dd62810db301087c 207 PANTHER PTHR23091 65 206 2.7E-16 T 21-04-2016 APL_RS05815 589ed34b2acc32020c9a372602690c5f 136 PIRSF PIRSF007050 1 136 8.9E-37 T 21-04-2016 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 APL_RS05815 589ed34b2acc32020c9a372602690c5f 136 Pfam PF10008 Uncharacterized protein conserved in bacteria (DUF2251) 19 114 1.6E-41 T 21-04-2016 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 APL_RS02720 51754c81991d6b6cb8339fe4a83e9912 111 Pfam PF05939 Phage minor tail protein 4 110 4.3E-31 T 21-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APL_RS10370 3f9226cc40add847223ed871f216f8a1 414 SUPERFAMILY SSF56925 275 393 7.85E-13 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS03975 be2fdd3fa9ae8ab37c54792c211b8e1c 353 Pfam PF01594 Domain of unknown function DUF20 20 346 1.1E-75 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like APL_RS03975 be2fdd3fa9ae8ab37c54792c211b8e1c 353 PANTHER PTHR21716:SF19 6 352 1.1E-130 T 21-04-2016 APL_RS03975 be2fdd3fa9ae8ab37c54792c211b8e1c 353 PANTHER PTHR21716 6 352 1.1E-130 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like APL_RS10000 1b6eadac33a5f8039fcfb79d14162c2f 392 SUPERFAMILY SSF56059 91 325 2.47E-40 T 21-04-2016 APL_RS10000 1b6eadac33a5f8039fcfb79d14162c2f 392 Pfam PF13535 ATP-grasp domain 151 291 4.5E-12 T 21-04-2016 APL_RS10000 1b6eadac33a5f8039fcfb79d14162c2f 392 Gene3D G3DSA:3.30.470.20 110 312 5.0E-26 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APL_RS02620 85f020459265ef735f4d3b91df60e531 340 Pfam PF06147 Protein of unknown function (DUF968) 135 333 8.7E-100 T 21-04-2016 IPR010373 Protein of unknown function DUF968 APL_RS08995 c2153eaf1bf88d7a42dfcb33fae7583a 689 Pfam PF05159 Capsule polysaccharide biosynthesis protein 397 470 4.9E-9 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APL_RS08995 c2153eaf1bf88d7a42dfcb33fae7583a 689 Pfam PF05159 Capsule polysaccharide biosynthesis protein 45 309 2.6E-63 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APL_RS08995 c2153eaf1bf88d7a42dfcb33fae7583a 689 Pfam PF05159 Capsule polysaccharide biosynthesis protein 487 632 5.5E-31 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APL_RS02520 ba684e71ecb0fd82d4ed90b30dfbbfee 173 Gene3D G3DSA:1.10.150.20 77 121 1.4E-8 T 21-04-2016 APL_RS02520 ba684e71ecb0fd82d4ed90b30dfbbfee 173 SUPERFAMILY SSF47794 74 124 6.12E-8 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APL_RS01135 700c25817b99707374b7b1e896628613 219 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 208 4.6E-83 T 21-04-2016 IPR008517 Protein of unknown function DUF799 APL_RS05105 f2c7e77928543b4f28f6df402592d86e 144 Pfam PF04217 Protein of unknown function, DUF412 3 142 1.4E-50 T 21-04-2016 IPR007334 Uncharacterised protein family UPF0208 APL_RS04645 ad799b8c23d4d608279e06ab802323ec 310 PANTHER PTHR36838 3 310 4.2E-18 T 21-04-2016 APL_RS04645 ad799b8c23d4d608279e06ab802323ec 310 Pfam PF03547 Membrane transport protein 155 304 1.1E-11 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APL_RS04645 ad799b8c23d4d608279e06ab802323ec 310 Pfam PF03547 Membrane transport protein 9 150 1.3E-12 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APL_RS02935 280d45491c29b3d1dad5eac0a2c4588c 63 Pfam PF04964 Flp/Fap pilin component 7 51 1.5E-8 T 21-04-2016 IPR007047 Flp/Fap pilin component APL_RS09610 b30b8fea8310e408701d9250aeae344a 174 Pfam PF07509 Protein of unknown function (DUF1523) 5 170 5.6E-66 T 21-04-2016 IPR011088 Bacteriophage phiNM3, A0EWY4 APL_RS08600 8d17d75a54ca06afee6185ea7b81bbc1 205 Pfam PF02361 Cobalt transport protein 9 201 2.3E-16 T 21-04-2016 IPR003339 ABC/ECF transporter, transmembrane component APL_RS00590 9bd177cbd7a1b7012433ffc980cb0d04 196 Pfam PF04222 Protein of unknown function (DUF416) 4 193 3.3E-81 T 21-04-2016 IPR007338 Protein of unknown function DUF416 APL_RS00590 9bd177cbd7a1b7012433ffc980cb0d04 196 Gene3D G3DSA:1.20.1590.10 1 193 5.1E-84 T 21-04-2016 IPR023381 YP001051499.1-like domain APL_RS01045 aa1a7fb2f1f40d1247ecf8c1012a28b7 208 PANTHER PTHR30086:SF1 1 207 2.3E-52 T 21-04-2016 APL_RS01045 aa1a7fb2f1f40d1247ecf8c1012a28b7 208 Pfam PF01810 LysE type translocator 10 201 8.2E-37 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS01045 aa1a7fb2f1f40d1247ecf8c1012a28b7 208 PANTHER PTHR30086 1 207 2.3E-52 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APL_RS02735 1152325aa9f43fbfc006adf2e4f557e0 287 PRINTS PR01994 Antirepressor protein ANT signature 72 95 1.8E-25 T 21-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APL_RS02735 1152325aa9f43fbfc006adf2e4f557e0 287 PRINTS PR01994 Antirepressor protein ANT signature 96 118 1.8E-25 T 21-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APL_RS02735 1152325aa9f43fbfc006adf2e4f557e0 287 PRINTS PR01994 Antirepressor protein ANT signature 27 48 1.8E-25 T 21-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APL_RS02735 1152325aa9f43fbfc006adf2e4f557e0 287 Pfam PF10547 P22_AR N-terminal domain 9 120 5.3E-42 T 21-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APL_RS07695 32747161f5bb9654335e201d32d3aff4 238 Pfam PF04402 Protein of unknown function (DUF541) 39 233 4.4E-18 T 21-04-2016 IPR007497 Protein of unknown function DUF541 APL_RS10365 8173fa29584de1f8ad3962251a042a18 284 SUPERFAMILY SSF56925 161 272 7.61E-10 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APL_RS02880 fdcbc075f26f8721976e35e70243b8ea 198 Pfam PF16964 Putative tight adherence pilin protein F 6 198 1.9E-61 T 21-04-2016 IPR031582 Putative tight adherence pilin protein F APL_RS09000 fc3615230968b349ab8e2b9ef312e9dc 405 Pfam PF05159 Capsule polysaccharide biosynthesis protein 86 394 8.0E-111 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APL_RS09890 31738de8e2df24d60f207afd1d882af9 104 SUPERFAMILY SSF55008 37 102 1.06E-14 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS09890 31738de8e2df24d60f207afd1d882af9 104 Gene3D G3DSA:3.30.70.100 37 102 2.8E-15 T 21-04-2016 APL_RS09890 31738de8e2df24d60f207afd1d882af9 104 Pfam PF00403 Heavy-metal-associated domain 41 99 3.2E-9 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APL_RS02685 a77cd799f20fb15bffc11aa355689a51 175 Pfam PF06763 Prophage minor tail protein Z (GPZ) 7 171 3.2E-32 T 21-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APL_RS02685 a77cd799f20fb15bffc11aa355689a51 175 PIRSF PIRSF004395 1 175 1.7E-35 T 21-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APL_RS10030 8a9dd297fb427498392c104b4eb24760 210 PIRSF PIRSF004525 1 210 2.4E-38 T 21-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted APL_RS08205 c3d4dda190a6833a59cc28b5c9174434 445 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 4 430 3.0E-130 T 21-04-2016 APL_RS05000 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 75 97 8.9E-34 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS05000 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 11 27 8.9E-34 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS05000 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 53 71 8.9E-34 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS05000 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 130 151 8.9E-34 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS05000 30527335c054c2c84176624dae6c34c7 160 Pfam PF02794 RTX toxin acyltransferase family 9 132 1.1E-41 T 21-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APL_RS09585 875f14f2846c2efa159f026c4285b9da 96 ProDom PD050153 PM1128 HI0234 52 95 3.0E-14 T 21-04-2016 APL_RS03930 f835ffa6bac69a9f9104eade8bfa5b41 92 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.2E-20 T 21-04-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system APL_RS07145 9d3c6e6047c4ee812e10f6c5cf88be21 123 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 32 109 1.7E-20 T 21-04-2016 IPR009241 Toxin HigB-like APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 PANTHER PTHR30462:SF0 1 888 0.0 T 21-04-2016 APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 Pfam PF02470 MlaD protein 46 136 1.2E-12 T 21-04-2016 IPR003399 Mce/MlaD APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 Pfam PF02470 MlaD protein 646 734 7.2E-10 T 21-04-2016 IPR003399 Mce/MlaD APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 Pfam PF02470 MlaD protein 164 219 3.0E-7 T 21-04-2016 IPR003399 Mce/MlaD APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 Pfam PF02470 MlaD protein 761 818 6.5E-10 T 21-04-2016 IPR003399 Mce/MlaD APL_RS06360 f6336e66ca04b0a8cd04c59d1be3803e 888 PANTHER PTHR30462 1 888 0.0 T 21-04-2016 APL_RS06445 0706649e3098c11f38dc6adf084e6838 294 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 61 194 1.4E-46 T 21-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 APL_RS02515 d1db065adcee39e60bd2f995c1cd0aa9 75 Pfam PF13986 Domain of unknown function (DUF4224) 7 50 1.0E-14 T 21-04-2016 IPR025319 Domain of unknown function DUF4224 APL_RS09635 cec4ef945a23ec0d1a1b0573f51b1171 258 Pfam PF06629 MltA-interacting protein MipA 30 258 6.3E-42 T 21-04-2016 IPR010583 MltA-interacting MipA APL_RS09635 cec4ef945a23ec0d1a1b0573f51b1171 258 PANTHER PTHR38776 11 258 2.7E-24 T 21-04-2016 APL_RS02875 3700a2e1649e42acde2af0424a4c68e0 520 Gene3D G3DSA:3.40.50.410 186 254 3.2E-7 T 21-04-2016 IPR002035 von Willebrand factor, type A APL_RS02875 3700a2e1649e42acde2af0424a4c68e0 520 Gene3D G3DSA:3.40.50.410 450 508 3.2E-7 T 21-04-2016 IPR002035 von Willebrand factor, type A APL_RS02875 3700a2e1649e42acde2af0424a4c68e0 520 Gene3D G3DSA:3.40.50.410 331 403 3.2E-7 T 21-04-2016 IPR002035 von Willebrand factor, type A APL_RS02875 3700a2e1649e42acde2af0424a4c68e0 520 SUPERFAMILY SSF53300 181 254 1.7E-11 T 21-04-2016 IPR002035 von Willebrand factor, type A APL_RS02875 3700a2e1649e42acde2af0424a4c68e0 520 SUPERFAMILY SSF53300 337 400 1.7E-11 T 21-04-2016 IPR002035 von Willebrand factor, type A APL_RS01100 a71ed6fb69d104f47212339b69b87da8 189 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 6 189 9.7E-52 T 21-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APL_RS01100 a71ed6fb69d104f47212339b69b87da8 189 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 7 189 4.0E-48 T 21-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APL_RS03490 857362ca63ccc165edcebb6daefb4df8 270 PANTHER PTHR39192 21 270 1.4E-96 T 21-04-2016 APL_RS03490 857362ca63ccc165edcebb6daefb4df8 270 Pfam PF09375 Imelysin 29 264 7.0E-40 T 21-04-2016 APL_RS00500 138694454f4b85e9b71168705d594194 138 Pfam PF05656 Protein of unknown function (DUF805) 8 131 1.3E-16 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APL_RS08370 f8ec8b3d3a28e56b22bf59cdd96868bd 184 ProDom PD104362 PM1073 HI0966 2 184 9.0E-68 T 21-04-2016 APL_RS09165 fd597f4c82375752415d8aa4a6b69b37 262 Pfam PF00872 Transposase, Mutator family 74 176 2.7E-5 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APL_RS04580 7ee58a47d5289746a24611b123f5614c 212 Pfam PF01478 Type IV leader peptidase family 77 177 2.1E-5 T 21-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APL_RS04115 84e950e94cdfc72de5bf5f8586b10888 142 Gene3D G3DSA:1.20.900.10 38 90 6.4E-4 T 21-04-2016 IPR000219 Dbl homology (DH) domain GO:0005089|GO:0035023 APL_RS07485 ca7d52ba6fdeac65c96f9f0e7312a8b8 113 Pfam PF05433 Glycine zipper 2TM domain 29 64 1.1E-7 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APL_RS04840 3db32fc5be892579eeae50e47779466c 210 Pfam PF10946 Protein of unknown function DUF2625 4 184 2.8E-70 T 21-04-2016 IPR021239 Protein of unknown function DUF2625 APL_RS08395 d7456c9114f10ad7d53aa96df17eef0f 526 Pfam PF05159 Capsule polysaccharide biosynthesis protein 206 387 1.9E-10 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APL_RS02940 cfd5a93f9c334fd0a0d695fa7bf02493 76 Pfam PF04964 Flp/Fap pilin component 20 67 1.3E-16 T 21-04-2016 IPR007047 Flp/Fap pilin component APL_RS01195 05c836e3ae98627e6cecb70af3510245 196 Pfam PF03923 Uncharacterized lipoprotein 34 193 1.2E-47 T 21-04-2016 IPR005619 Uncharacterised protein family, YajG APL_RS02420 ee73ee4d736948e255471af76915d3c9 97 ProDom PD394905 PM1122 UNCHARACTERIZED 5 81 3.0E-15 T 21-04-2016 APL_RS08785 085b87f6d537719bd62091e1bb2b2bed 127 Pfam PF03899 ATP synthase I chain 16 109 3.8E-17 T 21-04-2016 IPR005598 ATP synthase protein I APL_RS02475 f51efc057de2347d6c80ddd3125bf6ba 70 Pfam PF11127 Protein of unknown function (DUF2892) 1 60 1.8E-18 T 21-04-2016 IPR021309 Protein of unknown function DUF2892 APL_RS10265 e3eeabec1ab8165e88d6fc98b69e09f5 154 Pfam PF07670 Nucleoside recognition 29 119 6.6E-6 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698