locus-tag class description AFR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AFR_RS00005 PF00308 Bacterial dnaA protein AFR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AFR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AFR_RS00010 PF02767 DNA polymerase III beta subunit, central domain AFR_RS00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFR_RS00020 PF02463 RecF/RecN/SMC N terminal domain AFR_RS00025 PF05258 Dna[CI] antecedent, DciA AFR_RS00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS00040 PF01751 Toprim domain AFR_RS00040 PF00986 DNA gyrase B subunit, carboxyl terminus AFR_RS00040 PF00204 DNA gyrase B AFR_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A AFR_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller AFR_RS00050 PF12089 Transmembrane domain of unknown function (DUF3566) AFR_RS00080 PF00293 NUDIX domain AFR_RS00080 PF09297 NADH pyrophosphatase zinc ribbon domain AFR_RS00095 PF00583 Acetyltransferase (GNAT) family AFR_RS00100 PF01323 DSBA-like thioredoxin domain AFR_RS00105 PF02657 Fe-S metabolism associated domain AFR_RS00115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS00115 PF04073 Aminoacyl-tRNA editing domain AFR_RS00115 PF03129 Anticodon binding domain AFR_RS00125 PF00581 Rhodanese-like domain AFR_RS00130 PF08281 Sigma-70, region 4 AFR_RS00130 PF04542 Sigma-70 region 2 AFR_RS00140 PF00005 ABC transporter AFR_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS00160 PF00183 Hsp90 protein AFR_RS00175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS00175 PF00289 Biotin carboxylase, N-terminal domain AFR_RS00175 PF02785 Biotin carboxylase C-terminal domain AFR_RS00180 PF00682 HMGL-like AFR_RS00190 PF03777 ChpA-C AFR_RS00195 PF01039 Carboxyl transferase domain AFR_RS00200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS00200 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS00200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS00205 PF00196 Bacterial regulatory proteins, luxR family AFR_RS00210 PF01047 MarR family AFR_RS00215 PF04264 YceI-like domain AFR_RS00260 PF03808 Glycosyl transferase WecB/TagA/CpsF family AFR_RS00265 PF16363 GDP-mannose 4,6 dehydratase AFR_RS00275 PF12401 Protein of unknown function (DUF2662) AFR_RS00275 PF00498 FHA domain AFR_RS00275 PF12401 Protein of unknown function (DUF2662) AFR_RS00275 PF00498 FHA domain AFR_RS00280 PF16697 Inner membrane component of T3SS, cytoplasmic domain AFR_RS00290 PF01098 Cell cycle protein AFR_RS00295 PF00905 Penicillin binding protein transpeptidase domain AFR_RS00300 PF00069 Protein kinase domain AFR_RS00305 PF03793 PASTA domain AFR_RS00305 PF00069 Protein kinase domain AFR_RS00310 PF00117 Glutamine amidotransferase class-I AFR_RS00330 PF06781 Cell division protein CrgA AFR_RS00335 PF02754 Cysteine-rich domain AFR_RS00335 PF13183 4Fe-4S dicluster domain AFR_RS00345 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS00345 PF03471 Transporter associated domain AFR_RS00345 PF00571 CBS domain AFR_RS00350 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS00350 PF00571 CBS domain AFR_RS00360 PF04542 Sigma-70 region 2 AFR_RS00360 PF08281 Sigma-70, region 4 AFR_RS00375 PF00293 NUDIX domain AFR_RS00400 PF00692 dUTPase AFR_RS00430 PF00156 Phosphoribosyl transferase domain AFR_RS00445 PF12806 Acetyl-CoA dehydrogenase C-terminal like AFR_RS00445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS00445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS00445 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS00460 PF05368 NmrA-like family AFR_RS00475 PF03006 Haemolysin-III related AFR_RS00480 PF00578 AhpC/TSA family AFR_RS00480 PF02683 Cytochrome C biogenesis protein transmembrane region AFR_RS00480 PF17991 Thioredoxin like C-terminal domain AFR_RS00490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFR_RS00490 PF02817 e3 binding domain AFR_RS00490 PF00364 Biotin-requiring enzyme AFR_RS00495 PF02780 Transketolase, C-terminal domain AFR_RS00495 PF02779 Transketolase, pyrimidine binding domain AFR_RS00500 PF00676 Dehydrogenase E1 component AFR_RS00530 PF00012 Hsp70 protein AFR_RS00535 PF01025 GrpE AFR_RS00540 PF01556 DnaJ C terminal domain AFR_RS00540 PF00226 DnaJ domain AFR_RS00540 PF00684 DnaJ central domain AFR_RS00545 PF13411 MerR HTH family regulatory protein AFR_RS00555 PF00999 Sodium/hydrogen exchanger family AFR_RS00555 PF02254 TrkA-N domain AFR_RS00565 PF07690 Major Facilitator Superfamily AFR_RS00575 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS00575 PF07724 AAA domain (Cdc48 subfamily) AFR_RS00575 PF17871 AAA lid domain AFR_RS00575 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS00575 PF10431 C-terminal, D2-small domain, of ClpB protein AFR_RS00600 PF01022 Bacterial regulatory protein, arsR family AFR_RS00605 PF00596 Class II Aldolase and Adducin N-terminal domain AFR_RS00610 PF09335 SNARE associated Golgi protein AFR_RS00615 PF00149 Calcineurin-like phosphoesterase AFR_RS00625 PF08281 Sigma-70, region 4 AFR_RS00625 PF04542 Sigma-70 region 2 AFR_RS00645 PF01116 Fructose-bisphosphate aldolase class-II AFR_RS00695 PF00709 Adenylosuccinate synthetase AFR_RS00700 PF02844 Phosphoribosylglycinamide synthetase, N domain AFR_RS00700 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AFR_RS00700 PF02843 Phosphoribosylglycinamide synthetase, C domain AFR_RS00720 PF00206 Lyase AFR_RS00720 PF10397 Adenylosuccinate lyase C-terminus AFR_RS00730 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AFR_RS00740 PF00586 AIR synthase related protein, N-terminal domain AFR_RS00740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AFR_RS00740 PF02769 AIR synthase related protein, C-terminal domain AFR_RS00755 PF00156 Phosphoribosyl transferase domain AFR_RS00760 PF02769 AIR synthase related protein, C-terminal domain AFR_RS00760 PF00586 AIR synthase related protein, N-terminal domain AFR_RS00765 PF04055 Radical SAM superfamily AFR_RS00780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AFR_RS00780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AFR_RS00805 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AFR_RS00825 PF03061 Thioesterase superfamily AFR_RS00850 PF01740 STAS domain AFR_RS00865 PF04542 Sigma-70 region 2 AFR_RS00865 PF08281 Sigma-70, region 4 AFR_RS00870 PF03795 YCII-related domain AFR_RS00910 PF00293 NUDIX domain AFR_RS00915 PF01593 Flavin containing amine oxidoreductase AFR_RS00920 PF00348 Polyprenyl synthetase AFR_RS00930 PF03441 FAD binding domain of DNA photolyase AFR_RS00930 PF00875 DNA photolyase AFR_RS00945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS00945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS00985 PF01565 FAD binding domain AFR_RS00985 PF02913 FAD linked oxidases, C-terminal domain AFR_RS00990 PF12697 Alpha/beta hydrolase family AFR_RS01000 PF13439 Glycosyltransferase Family 4 AFR_RS01000 PF00534 Glycosyl transferases group 1 AFR_RS01005 PF13579 Glycosyl transferase 4-like domain AFR_RS01005 PF00534 Glycosyl transferases group 1 AFR_RS01020 PF03631 Virulence factor BrkB AFR_RS01080 PF00440 Bacterial regulatory proteins, tetR family AFR_RS01085 PF08281 Sigma-70, region 4 AFR_RS01085 PF04542 Sigma-70 region 2 AFR_RS01095 PF13443 Cro/C1-type HTH DNA-binding domain AFR_RS01120 PF03466 LysR substrate binding domain AFR_RS01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS01130 PF00248 Aldo/keto reductase family AFR_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS01150 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS01150 PF00672 HAMP domain AFR_RS01155 PF00072 Response regulator receiver domain AFR_RS01155 PF00486 Transcriptional regulatory protein, C terminal AFR_RS01170 PF02687 FtsX-like permease family AFR_RS01170 PF00005 ABC transporter AFR_RS01170 PF12704 MacB-like periplasmic core domain AFR_RS01175 PF00005 ABC transporter AFR_RS01175 PF02687 FtsX-like permease family AFR_RS01175 PF12704 MacB-like periplasmic core domain AFR_RS01190 PF07497 Rho termination factor, RNA-binding domain AFR_RS01190 PF07498 Rho termination factor, N-terminal domain AFR_RS01190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFR_RS01200 PF00561 alpha/beta hydrolase fold AFR_RS01210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS01210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS01220 PF00440 Bacterial regulatory proteins, tetR family AFR_RS01250 PF01741 Large-conductance mechanosensitive channel, MscL AFR_RS01260 PF08678 Rsbr N terminal AFR_RS01260 PF01740 STAS domain AFR_RS01265 PF01740 STAS domain AFR_RS01270 PF13581 Histidine kinase-like ATPase domain AFR_RS01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS01280 PF01627 Hpt domain AFR_RS01280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AFR_RS01280 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS01280 PF00672 HAMP domain AFR_RS01280 PF00072 Response regulator receiver domain AFR_RS01285 PF00072 Response regulator receiver domain AFR_RS01285 PF00486 Transcriptional regulatory protein, C terminal AFR_RS01295 PF00005 ABC transporter AFR_RS01305 PF00326 Prolyl oligopeptidase family AFR_RS01305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AFR_RS01315 PF01872 RibD C-terminal domain AFR_RS01315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFR_RS01320 PF01872 RibD C-terminal domain AFR_RS01335 PF00535 Glycosyl transferase family 2 AFR_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS01345 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS01345 PF09308 LuxQ, periplasmic AFR_RS01345 PF00072 Response regulator receiver domain AFR_RS01350 PF00072 Response regulator receiver domain AFR_RS01365 PF01740 STAS domain AFR_RS01370 PF00202 Aminotransferase class-III AFR_RS01375 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS01380 PF00578 AhpC/TSA family AFR_RS01385 PF02683 Cytochrome C biogenesis protein transmembrane region AFR_RS01395 PF01578 Cytochrome C assembly protein AFR_RS01400 PF00005 ABC transporter AFR_RS01405 PF00005 ABC transporter AFR_RS01405 PF00664 ABC transporter transmembrane region AFR_RS01415 PF00356 Bacterial regulatory proteins, lacI family AFR_RS01420 PF13416 Bacterial extracellular solute-binding protein AFR_RS01425 PF03422 Carbohydrate binding module (family 6) AFR_RS01425 PF16990 Carbohydrate binding module (family 35) AFR_RS01425 PF13199 Glycosyl hydrolase family 66 AFR_RS01430 PF00128 Alpha amylase, catalytic domain AFR_RS01435 PF00356 Bacterial regulatory proteins, lacI family AFR_RS01450 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFR_RS01455 PF01040 UbiA prenyltransferase family AFR_RS01460 PF08281 Sigma-70, region 4 AFR_RS01460 PF04542 Sigma-70 region 2 AFR_RS01470 PF02441 Flavoprotein AFR_RS01480 PF01037 Lrp/AsnC ligand binding domain AFR_RS01480 PF13404 AsnC-type helix-turn-helix domain AFR_RS01485 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS01500 PF00271 Helicase conserved C-terminal domain AFR_RS01500 PF00270 DEAD/DEAH box helicase AFR_RS01515 PF00877 NlpC/P60 family AFR_RS01520 PF04055 Radical SAM superfamily AFR_RS01535 PF00246 Zinc carboxypeptidase AFR_RS01570 PF01032 FecCD transport family AFR_RS01575 PF00005 ABC transporter AFR_RS01590 PF00005 ABC transporter AFR_RS01610 PF13538 UvrD-like helicase C-terminal domain AFR_RS01620 PF07690 Major Facilitator Superfamily AFR_RS01625 PF02621 Menaquinone biosynthesis AFR_RS01635 PF00535 Glycosyl transferase family 2 AFR_RS01645 PF01070 FMN-dependent dehydrogenase AFR_RS01650 PF00248 Aldo/keto reductase family AFR_RS01655 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS01655 PF16483 Beta-1,3-glucanase AFR_RS01660 PF04434 SWIM zinc finger AFR_RS01665 PF00271 Helicase conserved C-terminal domain AFR_RS01665 PF00176 SNF2 family N-terminal domain AFR_RS01665 PF12419 SNF2 Helicase protein AFR_RS01680 PF04055 Radical SAM superfamily AFR_RS01690 PF01209 ubiE/COQ5 methyltransferase family AFR_RS01700 PF01494 FAD binding domain AFR_RS01705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFR_RS01710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFR_RS01715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFR_RS01720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFR_RS01730 PF10531 SLBB domain AFR_RS01730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFR_RS01730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFR_RS01735 PF00384 Molybdopterin oxidoreductase AFR_RS01735 PF01568 Molydopterin dinucleotide binding domain AFR_RS01735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFR_RS01740 PF00146 NADH dehydrogenase AFR_RS01745 PF12838 4Fe-4S dicluster domain AFR_RS01750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFR_RS01755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFR_RS01760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFR_RS01760 PF00361 Proton-conducting membrane transporter AFR_RS01765 PF00361 Proton-conducting membrane transporter AFR_RS01770 PF00361 Proton-conducting membrane transporter AFR_RS01775 PF00348 Polyprenyl synthetase AFR_RS01790 PF04545 Sigma-70, region 4 AFR_RS01790 PF04542 Sigma-70 region 2 AFR_RS01795 PF13490 Putative zinc-finger AFR_RS01800 PF00892 EamA-like transporter family AFR_RS01810 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AFR_RS01820 PF06013 Proteins of 100 residues with WXG AFR_RS01840 PF00561 alpha/beta hydrolase fold AFR_RS01850 PF05547 Immune inhibitor A peptidase M6 AFR_RS01850 PF00801 PKD domain AFR_RS01860 PF05547 Immune inhibitor A peptidase M6 AFR_RS01860 PF00801 PKD domain AFR_RS01865 PF13193 AMP-binding enzyme C-terminal domain AFR_RS01865 PF00501 AMP-binding enzyme AFR_RS01865 PF16177 Acetyl-coenzyme A synthetase N-terminus AFR_RS01885 PF13466 STAS domain AFR_RS01895 PF00437 Type II/IV secretion system protein AFR_RS01925 PF09369 Domain of unknown function (DUF1998) AFR_RS01925 PF00270 DEAD/DEAH box helicase AFR_RS01925 PF00271 Helicase conserved C-terminal domain AFR_RS01930 PF01740 STAS domain AFR_RS01940 PF03030 Inorganic H+ pyrophosphatase AFR_RS01955 PF01131 DNA topoisomerase AFR_RS01955 PF01751 Toprim domain AFR_RS01955 PF13368 Topoisomerase C-terminal repeat AFR_RS01960 PF04030 D-arabinono-1,4-lactone oxidase AFR_RS01960 PF01565 FAD binding domain AFR_RS01965 PF17925 Tetracyclin repressor-like, C-terminal domain AFR_RS01965 PF00440 Bacterial regulatory proteins, tetR family AFR_RS01975 PF02223 Thymidylate kinase AFR_RS01980 PF12169 DNA polymerase III subunits gamma and tau domain III AFR_RS02005 PF04468 PSP1 C-terminal conserved region AFR_RS02010 PF02796 Helix-turn-helix domain of resolvase AFR_RS02010 PF00239 Resolvase, N terminal domain AFR_RS02035 PF12729 Four helix bundle sensory module for signal transduction AFR_RS02035 PF00672 HAMP domain AFR_RS02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS02040 PF07690 Major Facilitator Superfamily AFR_RS02045 PF00440 Bacterial regulatory proteins, tetR family AFR_RS02050 PF14602 Hexapeptide repeat of succinyl-transferase AFR_RS02050 PF12464 Maltose acetyltransferase AFR_RS02055 PF01494 FAD binding domain AFR_RS02100 PF01965 DJ-1/PfpI family AFR_RS02105 PF00293 NUDIX domain AFR_RS02110 PF02735 Ku70/Ku80 beta-barrel domain AFR_RS02115 PF13298 DNA polymerase Ligase (LigD) AFR_RS02115 PF01068 ATP dependent DNA ligase domain AFR_RS02115 PF04679 ATP dependent DNA ligase C terminal region AFR_RS02120 PF04679 ATP dependent DNA ligase C terminal region AFR_RS02120 PF01068 ATP dependent DNA ligase domain AFR_RS02120 PF13298 DNA polymerase Ligase (LigD) AFR_RS02135 PF04851 Type III restriction enzyme, res subunit AFR_RS02135 PF00271 Helicase conserved C-terminal domain AFR_RS02150 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS02155 PF00313 'Cold-shock' DNA-binding domain AFR_RS02160 PF02621 Menaquinone biosynthesis AFR_RS02165 PF01048 Phosphorylase superfamily AFR_RS02170 PF07690 Major Facilitator Superfamily AFR_RS02175 PF11228 Protein of unknown function (DUF3027) AFR_RS02185 PF00860 Permease family AFR_RS02190 PF01047 MarR family AFR_RS02195 PF05977 Transmembrane secretion effector AFR_RS02200 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS02200 PF00585 C-terminal regulatory domain of Threonine dehydratase AFR_RS02205 PF07729 FCD domain AFR_RS02205 PF00392 Bacterial regulatory proteins, gntR family AFR_RS02210 PF07690 Major Facilitator Superfamily AFR_RS02220 PF02834 LigT like Phosphoesterase AFR_RS02245 PF00155 Aminotransferase class I and II AFR_RS02250 PF00266 Aminotransferase class-V AFR_RS02255 PF00285 Citrate synthase, C-terminal domain AFR_RS02260 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AFR_RS02260 PF01243 Pyridoxamine 5'-phosphate oxidase AFR_RS02265 PF07690 Major Facilitator Superfamily AFR_RS02270 PF01263 Aldose 1-epimerase AFR_RS02285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS02285 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS02285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS02305 PF00535 Glycosyl transferase family 2 AFR_RS02305 PF01501 Glycosyl transferase family 8 AFR_RS02310 PF17912 MalK OB fold domain AFR_RS02310 PF00005 ABC transporter AFR_RS02320 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS02325 PF03636 Glycosyl hydrolase family 65, N-terminal domain AFR_RS02325 PF03632 Glycosyl hydrolase family 65 central catalytic domain AFR_RS02325 PF03633 Glycosyl hydrolase family 65, C-terminal domain AFR_RS02340 PF00005 ABC transporter AFR_RS02340 PF01476 LysM domain AFR_RS02350 PF00440 Bacterial regulatory proteins, tetR family AFR_RS02350 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS02385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFR_RS02395 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS02435 PF00440 Bacterial regulatory proteins, tetR family AFR_RS02435 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS02450 PF00069 Protein kinase domain AFR_RS02450 PF03793 PASTA domain AFR_RS02455 PF00534 Glycosyl transferases group 1 AFR_RS02455 PF17101 Stealth protein CR1, conserved region 1 AFR_RS02455 PF11380 Stealth protein CR2, conserved region 2 AFR_RS02455 PF17102 Stealth protein CR3, conserved region 3 AFR_RS02455 PF17103 Stealth protein CR4, conserved region 4 AFR_RS02465 PF04545 Sigma-70, region 4 AFR_RS02465 PF04542 Sigma-70 region 2 AFR_RS02475 PF04542 Sigma-70 region 2 AFR_RS02475 PF08281 Sigma-70, region 4 AFR_RS02490 PF02653 Branched-chain amino acid transport system / permease component AFR_RS02495 PF02653 Branched-chain amino acid transport system / permease component AFR_RS02500 PF00005 ABC transporter AFR_RS02510 PF13407 Periplasmic binding protein domain AFR_RS02540 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS02540 PF09277 Erythronolide synthase, docking AFR_RS02540 PF14765 Polyketide synthase dehydratase AFR_RS02540 PF08990 Erythronolide synthase docking AFR_RS02540 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS02540 PF00698 Acyl transferase domain AFR_RS02540 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS02540 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS02540 PF08659 KR domain AFR_RS02540 PF00550 Phosphopantetheine attachment site AFR_RS02595 PF01580 FtsK/SpoIIIE family AFR_RS02615 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS02615 PF17866 AAA lid domain AFR_RS02620 PF02575 YbaB/EbfC DNA-binding family AFR_RS02625 PF03704 Bacterial transcriptional activator domain AFR_RS02625 PF00931 NB-ARC domain AFR_RS02625 PF00486 Transcriptional regulatory protein, C terminal AFR_RS02630 PF03704 Bacterial transcriptional activator domain AFR_RS02630 PF00931 NB-ARC domain AFR_RS02630 PF00486 Transcriptional regulatory protein, C terminal AFR_RS02640 PF00072 Response regulator receiver domain AFR_RS02640 PF00196 Bacterial regulatory proteins, luxR family AFR_RS02665 PF00440 Bacterial regulatory proteins, tetR family AFR_RS02675 PF07690 Major Facilitator Superfamily AFR_RS02685 PF00072 Response regulator receiver domain AFR_RS02685 PF00486 Transcriptional regulatory protein, C terminal AFR_RS02720 PF02348 Cytidylyltransferase AFR_RS02735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFR_RS02740 PF02719 Polysaccharide biosynthesis protein AFR_RS02755 PF13193 AMP-binding enzyme C-terminal domain AFR_RS02755 PF00501 AMP-binding enzyme AFR_RS02770 PF00535 Glycosyl transferase family 2 AFR_RS02795 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS02795 PF00107 Zinc-binding dehydrogenase AFR_RS02820 PF00196 Bacterial regulatory proteins, luxR family AFR_RS02820 PF00072 Response regulator receiver domain AFR_RS02830 PF03176 MMPL family AFR_RS02835 PF05532 CsbD-like AFR_RS02840 PF00563 EAL domain AFR_RS02840 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS02840 PF03707 Bacterial signalling protein N terminal repeat AFR_RS02845 PF00535 Glycosyl transferase family 2 AFR_RS02855 PF03102 NeuB family AFR_RS02855 PF08666 SAF domain AFR_RS02875 PF01593 Flavin containing amine oxidoreductase AFR_RS02880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AFR_RS02885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AFR_RS02905 PF00563 EAL domain AFR_RS02905 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS02905 PF03707 Bacterial signalling protein N terminal repeat AFR_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS02925 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS02930 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS02930 PF16912 Glucose dehydrogenase C-terminus AFR_RS02950 PF07690 Major Facilitator Superfamily AFR_RS02965 PF00561 alpha/beta hydrolase fold AFR_RS02970 PF01513 ATP-NAD kinase AFR_RS02975 PF01169 Uncharacterized protein family UPF0016 AFR_RS03010 PF12680 SnoaL-like domain AFR_RS03010 PF08281 Sigma-70, region 4 AFR_RS03010 PF04542 Sigma-70 region 2 AFR_RS03015 PF02378 Phosphotransferase system, EIIC AFR_RS03015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFR_RS03020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFR_RS03020 PF02378 Phosphotransferase system, EIIC AFR_RS03030 PF02896 PEP-utilising enzyme, TIM barrel domain AFR_RS03030 PF00391 PEP-utilising enzyme, mobile domain AFR_RS03030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFR_RS03030 PF05524 PEP-utilising enzyme, N-terminal AFR_RS03030 PF00381 PTS HPr component phosphorylation site AFR_RS03040 PF02896 PEP-utilising enzyme, TIM barrel domain AFR_RS03040 PF00391 PEP-utilising enzyme, mobile domain AFR_RS03040 PF05524 PEP-utilising enzyme, N-terminal AFR_RS03050 PF18267 Rubredoxin NAD+ reductase C-terminal domain AFR_RS03050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS03055 PF07690 Major Facilitator Superfamily AFR_RS03065 PF00553 Cellulose binding domain AFR_RS03065 PF00041 Fibronectin type III domain AFR_RS03065 PF00704 Glycosyl hydrolases family 18 AFR_RS03090 PF00196 Bacterial regulatory proteins, luxR family AFR_RS03095 PF01061 ABC-2 type transporter AFR_RS03100 PF00005 ABC transporter AFR_RS03100 PF13732 Domain of unknown function (DUF4162) AFR_RS03105 PF00106 short chain dehydrogenase AFR_RS03110 PF00743 Flavin-binding monooxygenase-like AFR_RS03115 PF04261 Dyp-type peroxidase family AFR_RS03125 PF09335 SNARE associated Golgi protein AFR_RS03130 PF17678 Glycosyl hydrolase family 92 N-terminal domain AFR_RS03130 PF07971 Glycosyl hydrolase family 92 AFR_RS03135 PF01068 ATP dependent DNA ligase domain AFR_RS03135 PF13298 DNA polymerase Ligase (LigD) AFR_RS03135 PF04679 ATP dependent DNA ligase C terminal region AFR_RS03145 PF16657 Maltogenic Amylase, C-terminal domain AFR_RS03145 PF00128 Alpha amylase, catalytic domain AFR_RS03145 PF02903 Alpha amylase, N-terminal ig-like domain AFR_RS03150 PF04545 Sigma-70, region 4 AFR_RS03150 PF04539 Sigma-70 region 3 AFR_RS03150 PF04542 Sigma-70 region 2 AFR_RS03165 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS03165 PF00107 Zinc-binding dehydrogenase AFR_RS03165 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS03170 PF00106 short chain dehydrogenase AFR_RS03180 PF00248 Aldo/keto reductase family AFR_RS03195 PF00398 Ribosomal RNA adenine dimethylase AFR_RS03215 PF08241 Methyltransferase domain AFR_RS03220 PF00999 Sodium/hydrogen exchanger family AFR_RS03225 PF04198 Putative sugar-binding domain AFR_RS03230 PF00106 short chain dehydrogenase AFR_RS03235 PF00464 Serine hydroxymethyltransferase AFR_RS03255 PF00356 Bacterial regulatory proteins, lacI family AFR_RS03260 PF13407 Periplasmic binding protein domain AFR_RS03265 PF02653 Branched-chain amino acid transport system / permease component AFR_RS03270 PF00005 ABC transporter AFR_RS03290 PF05336 L-rhamnose mutarotase AFR_RS03300 PF02653 Branched-chain amino acid transport system / permease component AFR_RS03305 PF02653 Branched-chain amino acid transport system / permease component AFR_RS03310 PF00005 ABC transporter AFR_RS03315 PF00356 Bacterial regulatory proteins, lacI family AFR_RS03320 PF00596 Class II Aldolase and Adducin N-terminal domain AFR_RS03325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS03325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS03330 PF02754 Cysteine-rich domain AFR_RS03335 PF02589 LUD domain AFR_RS03335 PF13183 4Fe-4S dicluster domain AFR_RS03335 PF11870 Domain of unknown function (DUF3390) AFR_RS03340 PF02589 LUD domain AFR_RS03355 PF02702 Osmosensitive K+ channel His kinase sensor domain AFR_RS03355 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS03355 PF13493 Domain of unknown function (DUF4118) AFR_RS03355 PF00582 Universal stress protein family AFR_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS03360 PF00440 Bacterial regulatory proteins, tetR family AFR_RS03360 PF17933 Tetracyclin repressor-like, C-terminal domain AFR_RS03365 PF00005 ABC transporter AFR_RS03365 PF13732 Domain of unknown function (DUF4162) AFR_RS03375 PF00999 Sodium/hydrogen exchanger family AFR_RS03380 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFR_RS03380 PF05221 S-adenosyl-L-homocysteine hydrolase AFR_RS03390 PF00356 Bacterial regulatory proteins, lacI family AFR_RS03395 PF03795 YCII-related domain AFR_RS03400 PF04542 Sigma-70 region 2 AFR_RS03400 PF08281 Sigma-70, region 4 AFR_RS03410 PF01261 Xylose isomerase-like TIM barrel AFR_RS03415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS03415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS03425 PF01435 Peptidase family M48 AFR_RS03430 PF01327 Polypeptide deformylase AFR_RS03440 PF00067 Cytochrome P450 AFR_RS03460 PF06965 Na+/H+ antiporter 1 AFR_RS03470 PF00005 ABC transporter AFR_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS03475 PF05384 Sensor protein DegS AFR_RS03475 PF07730 Histidine kinase AFR_RS03480 PF00196 Bacterial regulatory proteins, luxR family AFR_RS03480 PF00072 Response regulator receiver domain AFR_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS03500 PF16591 Helical bimodular sensor domain AFR_RS03500 PF00672 HAMP domain AFR_RS03510 PF08264 Anticodon-binding domain of tRNA AFR_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) AFR_RS03515 PF01300 Telomere recombination AFR_RS03525 PF01047 MarR family AFR_RS03535 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS03535 PF03707 Bacterial signalling protein N terminal repeat AFR_RS03535 PF00563 EAL domain AFR_RS03540 PF03358 NADPH-dependent FMN reductase AFR_RS03550 PF01565 FAD binding domain AFR_RS03550 PF08031 Berberine and berberine like AFR_RS03555 PF00296 Luciferase-like monooxygenase AFR_RS03565 PF00072 Response regulator receiver domain AFR_RS03565 PF00196 Bacterial regulatory proteins, luxR family AFR_RS03570 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS03570 PF00107 Zinc-binding dehydrogenase AFR_RS03605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS03605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS03680 PF04055 Radical SAM superfamily AFR_RS03690 PF01625 Peptide methionine sulfoxide reductase AFR_RS03695 PF12680 SnoaL-like domain AFR_RS03695 PF08281 Sigma-70, region 4 AFR_RS03695 PF04542 Sigma-70 region 2 AFR_RS03705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AFR_RS03770 PF00440 Bacterial regulatory proteins, tetR family AFR_RS03770 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS03780 PF01370 NAD dependent epimerase/dehydratase family AFR_RS03785 PF00664 ABC transporter transmembrane region AFR_RS03785 PF00005 ABC transporter AFR_RS03790 PF00664 ABC transporter transmembrane region AFR_RS03790 PF00005 ABC transporter AFR_RS03800 PF01042 Endoribonuclease L-PSP AFR_RS03820 PF00196 Bacterial regulatory proteins, luxR family AFR_RS03835 PF00331 Glycosyl hydrolase family 10 AFR_RS03835 PF00756 Putative esterase AFR_RS03835 PF03422 Carbohydrate binding module (family 6) AFR_RS03835 PF00404 Dockerin type I domain AFR_RS03845 PF00589 Phage integrase family AFR_RS03845 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS03855 PF03466 LysR substrate binding domain AFR_RS03875 PF00196 Bacterial regulatory proteins, luxR family AFR_RS03875 PF00072 Response regulator receiver domain AFR_RS03905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFR_RS03915 PF02515 CoA-transferase family III AFR_RS03920 PF01979 Amidohydrolase family AFR_RS03925 PF01614 Bacterial transcriptional regulator AFR_RS03925 PF09339 IclR helix-turn-helix domain AFR_RS03940 PF13847 Methyltransferase domain AFR_RS03940 PF03551 Transcriptional regulator PadR-like family AFR_RS03945 PF01979 Amidohydrolase family AFR_RS03945 PF13382 Adenine deaminase C-terminal domain AFR_RS03965 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AFR_RS03970 PF00793 DAHP synthetase I family AFR_RS03980 PF00672 HAMP domain AFR_RS03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS03980 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS03985 PF00486 Transcriptional regulatory protein, C terminal AFR_RS03985 PF00072 Response regulator receiver domain AFR_RS04010 PF00488 MutS domain V AFR_RS04010 PF01713 Smr domain AFR_RS04025 PF00486 Transcriptional regulatory protein, C terminal AFR_RS04025 PF00072 Response regulator receiver domain AFR_RS04030 PF00360 Phytochrome region AFR_RS04030 PF01590 GAF domain AFR_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS04030 PF08446 PAS fold AFR_RS04035 PF00072 Response regulator receiver domain AFR_RS04040 PF00459 Inositol monophosphatase family AFR_RS04065 PF03793 PASTA domain AFR_RS04065 PF00069 Protein kinase domain AFR_RS04070 PF02080 TrkA-C domain AFR_RS04070 PF02254 TrkA-N domain AFR_RS04075 PF02386 Cation transport protein AFR_RS04080 PF07690 Major Facilitator Superfamily AFR_RS04105 PF09382 RQC domain AFR_RS04105 PF00570 HRDC domain AFR_RS04105 PF00270 DEAD/DEAH box helicase AFR_RS04105 PF00271 Helicase conserved C-terminal domain AFR_RS04105 PF16124 RecQ zinc-binding AFR_RS04110 PF08239 Bacterial SH3 domain AFR_RS04110 PF01476 LysM domain AFR_RS04110 PF00877 NlpC/P60 family AFR_RS04115 PF02583 Metal-sensitive transcriptional repressor AFR_RS04135 PF01126 Heme oxygenase AFR_RS04145 PF00270 DEAD/DEAH box helicase AFR_RS04145 PF00271 Helicase conserved C-terminal domain AFR_RS04165 PF00561 alpha/beta hydrolase fold AFR_RS04185 PF00581 Rhodanese-like domain AFR_RS04185 PF00899 ThiF family AFR_RS04195 PF00171 Aldehyde dehydrogenase family AFR_RS04200 PF00696 Amino acid kinase family AFR_RS04200 PF01472 PUA domain AFR_RS04210 PF04072 Leucine carboxyl methyltransferase AFR_RS04215 PF00440 Bacterial regulatory proteins, tetR family AFR_RS04215 PF13305 Tetracyclin repressor-like, C-terminal domain AFR_RS04240 PF04029 2-phosphosulpholactate phosphatase AFR_RS04245 PF00282 Pyridoxal-dependent decarboxylase conserved domain AFR_RS04250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFR_RS04265 PF08281 Sigma-70, region 4 AFR_RS04265 PF04542 Sigma-70 region 2 AFR_RS04270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFR_RS04270 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFR_RS04275 PF00146 NADH dehydrogenase AFR_RS04280 PF00144 Beta-lactamase AFR_RS04290 PF00037 4Fe-4S binding domain AFR_RS04295 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFR_RS04300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFR_RS04305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFR_RS04305 PF00361 Proton-conducting membrane transporter AFR_RS04310 PF00361 Proton-conducting membrane transporter AFR_RS04315 PF00361 Proton-conducting membrane transporter AFR_RS04320 PF01435 Peptidase family M48 AFR_RS04355 PF00296 Luciferase-like monooxygenase AFR_RS04380 PF04542 Sigma-70 region 2 AFR_RS04380 PF08281 Sigma-70, region 4 AFR_RS04415 PF07859 alpha/beta hydrolase fold AFR_RS04425 PF04461 Protein of unknown function (DUF520) AFR_RS04435 PF00581 Rhodanese-like domain AFR_RS04445 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS04445 PF03707 Bacterial signalling protein N terminal repeat AFR_RS04445 PF13188 PAS domain AFR_RS04445 PF00563 EAL domain AFR_RS04460 PF00471 Ribosomal protein L33 AFR_RS04465 PF13452 N-terminal half of MaoC dehydratase AFR_RS04480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AFR_RS04485 PF02357 Transcription termination factor nusG AFR_RS04490 PF00687 Ribosomal protein L1p/L10e family AFR_RS04495 PF00005 ABC transporter AFR_RS04505 PF00466 Ribosomal protein L10 AFR_RS04510 PF16320 Ribosomal protein L7/L12 dimerisation domain AFR_RS04510 PF00542 Ribosomal protein L7/L12 C-terminal domain AFR_RS04515 PF04561 RNA polymerase Rpb2, domain 2 AFR_RS04515 PF04563 RNA polymerase beta subunit AFR_RS04515 PF04565 RNA polymerase Rpb2, domain 3 AFR_RS04515 PF00562 RNA polymerase Rpb2, domain 6 AFR_RS04515 PF10385 RNA polymerase beta subunit external 1 domain AFR_RS04515 PF04560 RNA polymerase Rpb2, domain 7 AFR_RS04520 PF04998 RNA polymerase Rpb1, domain 5 AFR_RS04520 PF04997 RNA polymerase Rpb1, domain 1 AFR_RS04520 PF00623 RNA polymerase Rpb1, domain 2 AFR_RS04520 PF04983 RNA polymerase Rpb1, domain 3 AFR_RS04520 PF05000 RNA polymerase Rpb1, domain 4 AFR_RS04535 PF00164 Ribosomal protein S12/S23 AFR_RS04540 PF00177 Ribosomal protein S7p/S5e AFR_RS04545 PF03764 Elongation factor G, domain IV AFR_RS04545 PF14492 Elongation Factor G, domain II AFR_RS04545 PF00679 Elongation factor G C-terminus AFR_RS04545 PF00009 Elongation factor Tu GTP binding domain AFR_RS04545 PF03144 Elongation factor Tu domain 2 AFR_RS04550 PF03143 Elongation factor Tu C-terminal domain AFR_RS04550 PF03144 Elongation factor Tu domain 2 AFR_RS04550 PF00009 Elongation factor Tu GTP binding domain AFR_RS04555 PF00338 Ribosomal protein S10p/S20e AFR_RS04560 PF00297 Ribosomal protein L3 AFR_RS04565 PF00573 Ribosomal protein L4/L1 family AFR_RS04570 PF00276 Ribosomal protein L23 AFR_RS04575 PF00181 Ribosomal Proteins L2, RNA binding domain AFR_RS04575 PF03947 Ribosomal Proteins L2, C-terminal domain AFR_RS04580 PF00203 Ribosomal protein S19 AFR_RS04585 PF00237 Ribosomal protein L22p/L17e AFR_RS04590 PF00189 Ribosomal protein S3, C-terminal domain AFR_RS04590 PF07650 KH domain AFR_RS04595 PF00252 Ribosomal protein L16p/L10e AFR_RS04600 PF00831 Ribosomal L29 protein AFR_RS04605 PF00366 Ribosomal protein S17 AFR_RS04610 PF00238 Ribosomal protein L14p/L23e AFR_RS04615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AFR_RS04615 PF00467 KOW motif AFR_RS04620 PF00673 ribosomal L5P family C-terminus AFR_RS04620 PF00281 Ribosomal protein L5 AFR_RS04625 PF00253 Ribosomal protein S14p/S29e AFR_RS04630 PF00410 Ribosomal protein S8 AFR_RS04635 PF00347 Ribosomal protein L6 AFR_RS04640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AFR_RS04645 PF00333 Ribosomal protein S5, N-terminal domain AFR_RS04645 PF03719 Ribosomal protein S5, C-terminal domain AFR_RS04650 PF00327 Ribosomal protein L30p/L7e AFR_RS04655 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AFR_RS04660 PF00344 SecY translocase AFR_RS04665 PF05191 Adenylate kinase, active site lid AFR_RS04670 PF00557 Metallopeptidase family M24 AFR_RS04685 PF01176 Translation initiation factor 1A / IF-1 AFR_RS04690 PF00444 Ribosomal protein L36 AFR_RS04695 PF00416 Ribosomal protein S13/S18 AFR_RS04700 PF00411 Ribosomal protein S11 AFR_RS04705 PF00163 Ribosomal protein S4/S9 N-terminal domain AFR_RS04705 PF01479 S4 domain AFR_RS04710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AFR_RS04710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AFR_RS04710 PF01000 RNA polymerase Rpb3/RpoA insert domain AFR_RS04715 PF01196 Ribosomal protein L17 AFR_RS04720 PF01416 tRNA pseudouridine synthase AFR_RS04730 PF08468 Methyltransferase small domain N-terminal AFR_RS04730 PF05175 Methyltransferase small domain AFR_RS04735 PF12848 ABC transporter AFR_RS04735 PF00005 ABC transporter AFR_RS04745 PF02581 Thiamine monophosphate synthase AFR_RS04750 PF01266 FAD dependent oxidoreductase AFR_RS04750 PF05690 Thiazole biosynthesis protein ThiG AFR_RS04760 PF05690 Thiazole biosynthesis protein ThiG AFR_RS04765 PF02581 Thiamine monophosphate synthase AFR_RS04770 PF08543 Phosphomethylpyrimidine kinase AFR_RS04775 PF13667 ThiC-associated domain AFR_RS04775 PF01964 Radical SAM ThiC family AFR_RS04795 PF00005 ABC transporter AFR_RS04800 PF09084 NMT1/THI5 like AFR_RS04805 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS04820 PF03259 Roadblock/LC7 domain AFR_RS04840 PF00572 Ribosomal protein L13 AFR_RS04845 PF00380 Ribosomal protein S9/S16 AFR_RS04850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFR_RS04850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFR_RS04850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFR_RS04850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFR_RS04855 PF00155 Aminotransferase class I and II AFR_RS04865 PF01380 SIS domain AFR_RS04880 PF01648 4'-phosphopantetheinyl transferase superfamily AFR_RS04885 PF01256 Carbohydrate kinase AFR_RS04885 PF03853 YjeF-related protein N-terminus AFR_RS04890 PF00842 Alanine racemase, C-terminal domain AFR_RS04890 PF01168 Alanine racemase, N-terminal domain AFR_RS04895 PF00561 alpha/beta hydrolase fold AFR_RS04900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AFR_RS04905 PF03167 Uracil DNA glycosylase superfamily AFR_RS04910 PF00814 Glycoprotease family AFR_RS04910 PF00583 Acetyltransferase (GNAT) family AFR_RS04920 PF00814 Glycoprotease family AFR_RS04930 PF00664 ABC transporter transmembrane region AFR_RS04930 PF00005 ABC transporter AFR_RS04935 PF00664 ABC transporter transmembrane region AFR_RS04935 PF00005 ABC transporter AFR_RS04940 PF00480 ROK family AFR_RS04945 PF02653 Branched-chain amino acid transport system / permease component AFR_RS04950 PF00005 ABC transporter AFR_RS04960 PF04073 Aminoacyl-tRNA editing domain AFR_RS04965 PF18096 THUMP domain-like AFR_RS04970 PF00166 Chaperonin 10 Kd subunit AFR_RS04975 PF00118 TCP-1/cpn60 chaperonin family AFR_RS04990 PF02467 Transcription factor WhiB AFR_RS04995 PF00072 Response regulator receiver domain AFR_RS04995 PF00196 Bacterial regulatory proteins, luxR family AFR_RS05000 PF17252 Family of unknown function (DUF5319) AFR_RS05005 PF00478 IMP dehydrogenase / GMP reductase domain AFR_RS05005 PF00571 CBS domain AFR_RS05010 PF00478 IMP dehydrogenase / GMP reductase domain AFR_RS05015 PF01433 Peptidase family M1 domain AFR_RS05015 PF11838 ERAP1-like C-terminal domain AFR_RS05025 PF00082 Subtilase family AFR_RS05030 PF00082 Subtilase family AFR_RS05035 PF02540 NAD synthase AFR_RS05035 PF00958 GMP synthase C terminal domain AFR_RS05035 PF00117 Glutamine amidotransferase class-I AFR_RS05045 PF00293 NUDIX domain AFR_RS05055 PF01066 CDP-alcohol phosphatidyltransferase AFR_RS05060 PF02666 Phosphatidylserine decarboxylase AFR_RS05080 PF00072 Response regulator receiver domain AFR_RS05080 PF00196 Bacterial regulatory proteins, luxR family AFR_RS05085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS05090 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS05095 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS05100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS05100 PF00005 ABC transporter AFR_RS05105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS05105 PF00005 ABC transporter AFR_RS05115 PF01817 Chorismate mutase type II AFR_RS05120 PF00565 Staphylococcal nuclease homologue AFR_RS05120 PF00149 Calcineurin-like phosphoesterase AFR_RS05120 PF02872 5'-nucleotidase, C-terminal domain AFR_RS05120 PF00746 LPXTG cell wall anchor motif AFR_RS05125 PF13361 UvrD-like helicase C-terminal domain AFR_RS05125 PF00580 UvrD/REP helicase N-terminal domain AFR_RS05130 PF01551 Peptidase family M23 AFR_RS05130 PF01464 Transglycosylase SLT domain AFR_RS05130 PF10145 Phage-related minor tail protein AFR_RS05135 PF01551 Peptidase family M23 AFR_RS05140 PF02310 B12 binding domain AFR_RS05140 PF01642 Methylmalonyl-CoA mutase AFR_RS05145 PF00549 CoA-ligase AFR_RS05145 PF08442 ATP-grasp domain AFR_RS05150 PF00549 CoA-ligase AFR_RS05150 PF02629 CoA binding domain AFR_RS05165 PF00551 Formyl transferase AFR_RS05170 PF01808 AICARFT/IMPCHase bienzyme AFR_RS05170 PF02142 MGS-like domain AFR_RS05180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AFR_RS05180 PF00056 lactate/malate dehydrogenase, NAD binding domain AFR_RS05185 PF00753 Metallo-beta-lactamase superfamily AFR_RS05190 PF16655 PhoD-like phosphatase, N-terminal domain AFR_RS05190 PF09423 PhoD-like phosphatase AFR_RS05195 PF00180 Isocitrate/isopropylmalate dehydrogenase AFR_RS05200 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AFR_RS05200 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AFR_RS05205 PF08220 DeoR-like helix-turn-helix domain AFR_RS05205 PF00455 DeoR C terminal sensor domain AFR_RS05210 PF00535 Glycosyl transferase family 2 AFR_RS05220 PF03808 Glycosyl transferase WecB/TagA/CpsF family AFR_RS05275 PF00005 ABC transporter AFR_RS05285 PF00005 ABC transporter AFR_RS05300 PF13411 MerR HTH family regulatory protein AFR_RS05305 PF00106 short chain dehydrogenase AFR_RS05310 PF00311 Phosphoenolpyruvate carboxylase AFR_RS05325 PF00553 Cellulose binding domain AFR_RS05325 PF01341 Glycosyl hydrolases family 6 AFR_RS05340 PF02911 Formyl transferase, C-terminal domain AFR_RS05340 PF00551 Formyl transferase AFR_RS05340 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS05345 PF03461 TRCF domain AFR_RS05345 PF00270 DEAD/DEAH box helicase AFR_RS05345 PF02559 CarD-like/TRCF domain AFR_RS05345 PF17757 UvrB interaction domain AFR_RS05345 PF00271 Helicase conserved C-terminal domain AFR_RS05355 PF03819 MazG nucleotide pyrophosphohydrolase domain AFR_RS05365 PF12728 Helix-turn-helix domain AFR_RS05365 PF02661 Fic/DOC family AFR_RS05380 PF00113 Enolase, C-terminal TIM barrel domain AFR_RS05380 PF03952 Enolase, N-terminal domain AFR_RS05395 PF00583 Acetyltransferase (GNAT) family AFR_RS05400 PF02541 Ppx/GppA phosphatase family AFR_RS05420 PF03167 Uracil DNA glycosylase superfamily AFR_RS05435 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS05435 PF17863 AAA lid domain AFR_RS05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS05475 PF02803 Thiolase, C-terminal domain AFR_RS05475 PF00108 Thiolase, N-terminal domain AFR_RS05480 PF13472 GDSL-like Lipase/Acylhydrolase family AFR_RS05495 PF00571 CBS domain AFR_RS05495 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS05510 PF00072 Response regulator receiver domain AFR_RS05510 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS05515 PF01928 CYTH domain AFR_RS05515 PF05235 CHAD domain AFR_RS05520 PF03976 Polyphosphate kinase 2 (PPK2) AFR_RS05525 PF00753 Metallo-beta-lactamase superfamily AFR_RS05525 PF12706 Beta-lactamase superfamily domain AFR_RS05540 PF13180 PDZ domain AFR_RS05560 PF01625 Peptide methionine sulfoxide reductase AFR_RS05570 PF01053 Cys/Met metabolism PLP-dependent enzyme AFR_RS05575 PF01425 Amidase AFR_RS05580 PF13291 ACT domain AFR_RS05580 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS05585 PF01272 Transcription elongation factor, GreA/GreB, C-term AFR_RS05585 PF03449 Transcription elongation factor, N-terminal AFR_RS05595 PF02585 GlcNAc-PI de-N-acetylase AFR_RS05605 PF03707 Bacterial signalling protein N terminal repeat AFR_RS05605 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS05605 PF00563 EAL domain AFR_RS05610 PF03190 Protein of unknown function, DUF255 AFR_RS05615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AFR_RS05615 PF02222 ATP-grasp domain AFR_RS05620 PF00731 AIR carboxylase AFR_RS05630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS05630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS05630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS05635 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS05635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS05635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS05645 PF00069 Protein kinase domain AFR_RS05645 PF13360 PQQ-like domain AFR_RS05650 PF01494 FAD binding domain AFR_RS05665 PF00753 Metallo-beta-lactamase superfamily AFR_RS05685 PF13193 AMP-binding enzyme C-terminal domain AFR_RS05685 PF00501 AMP-binding enzyme AFR_RS05700 PF01050 Mannose-6-phosphate isomerase AFR_RS05700 PF00483 Nucleotidyl transferase AFR_RS05710 PF01996 F420-0:Gamma-glutamyl ligase AFR_RS05710 PF00881 Nitroreductase family AFR_RS05715 PF01933 Uncharacterised protein family UPF0052 AFR_RS05725 PF04055 Radical SAM superfamily AFR_RS05730 PF02467 Transcription factor WhiB AFR_RS05745 PF01522 Polysaccharide deacetylase AFR_RS05755 PF00171 Aldehyde dehydrogenase family AFR_RS05765 PF00171 Aldehyde dehydrogenase family AFR_RS05775 PF04493 Endonuclease V AFR_RS05780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFR_RS05780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFR_RS05780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFR_RS05780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFR_RS05785 PF03966 Trm112p-like protein AFR_RS05800 PF01238 Phosphomannose isomerase type I AFR_RS05815 PF03239 Iron permease FTR1 family AFR_RS05820 PF13473 Cupredoxin-like domain AFR_RS05820 PF09375 Imelysin AFR_RS05825 PF10518 TAT (twin-arginine translocation) pathway signal sequence AFR_RS05825 PF04261 Dyp-type peroxidase family AFR_RS05830 PF00486 Transcriptional regulatory protein, C terminal AFR_RS05830 PF00072 Response regulator receiver domain AFR_RS05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS05835 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS05835 PF00672 HAMP domain AFR_RS05850 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AFR_RS05850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AFR_RS05855 PF13302 Acetyltransferase (GNAT) domain AFR_RS05865 PF07516 SecA Wing and Scaffold domain AFR_RS05865 PF07517 SecA DEAD-like domain AFR_RS05865 PF01043 SecA preprotein cross-linking domain AFR_RS05865 PF02810 SEC-C motif AFR_RS05880 PF01037 Lrp/AsnC ligand binding domain AFR_RS05900 PF00171 Aldehyde dehydrogenase family AFR_RS05910 PF00472 RF-1 domain AFR_RS05910 PF03462 PCRF domain AFR_RS05915 PF00005 ABC transporter AFR_RS05920 PF02687 FtsX-like permease family AFR_RS05920 PF18075 FtsX extracellular domain AFR_RS05925 PF01551 Peptidase family M23 AFR_RS05925 PF10145 Phage-related minor tail protein AFR_RS05925 PF01464 Transglycosylase SLT domain AFR_RS05930 PF01668 SmpB protein AFR_RS05960 PF01048 Phosphorylase superfamily AFR_RS05965 PF02622 Uncharacterized ACR, COG1678 AFR_RS05985 PF00196 Bacterial regulatory proteins, luxR family AFR_RS05995 PF07859 alpha/beta hydrolase fold AFR_RS06000 PF00296 Luciferase-like monooxygenase AFR_RS06005 PF00392 Bacterial regulatory proteins, gntR family AFR_RS06005 PF07729 FCD domain AFR_RS06015 PF07739 TipAS antibiotic-recognition domain AFR_RS06015 PF13411 MerR HTH family regulatory protein AFR_RS06050 PF01478 Type IV leader peptidase family AFR_RS06050 PF06750 Bacterial Peptidase A24 N-terminal domain AFR_RS06055 PF07963 Prokaryotic N-terminal methylation motif AFR_RS06060 PF00482 Type II secretion system (T2SS), protein F AFR_RS06065 PF00437 Type II/IV secretion system protein AFR_RS06070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AFR_RS06070 PF00437 Type II/IV secretion system protein AFR_RS06075 PF12833 Helix-turn-helix domain AFR_RS06075 PF02311 AraC-like ligand binding domain AFR_RS06085 PF02031 Streptomyces extracellular neutral proteinase (M7) family AFR_RS06095 PF01740 STAS domain AFR_RS06105 PF00486 Transcriptional regulatory protein, C terminal AFR_RS06105 PF00072 Response regulator receiver domain AFR_RS06110 PF00989 PAS fold AFR_RS06110 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS06110 PF00672 HAMP domain AFR_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS06110 PF18698 Histidine kinase sensor domain AFR_RS06115 PF00072 Response regulator receiver domain AFR_RS06115 PF00486 Transcriptional regulatory protein, C terminal AFR_RS06120 PF01047 MarR family AFR_RS06130 PF00563 EAL domain AFR_RS06130 PF03707 Bacterial signalling protein N terminal repeat AFR_RS06130 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS06175 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS06175 PF08448 PAS fold AFR_RS06175 PF13466 STAS domain AFR_RS06175 PF13581 Histidine kinase-like ATPase domain AFR_RS06220 PF00082 Subtilase family AFR_RS06240 PF00005 ABC transporter AFR_RS06240 PF13732 Domain of unknown function (DUF4162) AFR_RS06245 PF01061 ABC-2 type transporter AFR_RS06250 PF00392 Bacterial regulatory proteins, gntR family AFR_RS06250 PF07729 FCD domain AFR_RS06255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AFR_RS06260 PF01177 Asp/Glu/Hydantoin racemase AFR_RS06265 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS06280 PF13086 AAA domain AFR_RS06280 PF13087 AAA domain AFR_RS06280 PF13195 Protein of unknown function (DUF4011) AFR_RS06285 PF01965 DJ-1/PfpI family AFR_RS06285 PF12833 Helix-turn-helix domain AFR_RS06300 PF00563 EAL domain AFR_RS06300 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS06300 PF08448 PAS fold AFR_RS06305 PF02130 Uncharacterized protein family UPF0054 AFR_RS06305 PF07883 Cupin domain AFR_RS06320 PF04536 TPM domain AFR_RS06325 PF00107 Zinc-binding dehydrogenase AFR_RS06325 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS06330 PF00753 Metallo-beta-lactamase superfamily AFR_RS06345 PF13298 DNA polymerase Ligase (LigD) AFR_RS06345 PF01068 ATP dependent DNA ligase domain AFR_RS06345 PF04679 ATP dependent DNA ligase C terminal region AFR_RS06350 PF12833 Helix-turn-helix domain AFR_RS06355 PF01494 FAD binding domain AFR_RS06360 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFR_RS06370 PF07690 Major Facilitator Superfamily AFR_RS06385 PF00857 Isochorismatase family AFR_RS06390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AFR_RS06390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFR_RS06395 PF00196 Bacterial regulatory proteins, luxR family AFR_RS06400 PF02617 ATP-dependent Clp protease adaptor protein ClpS AFR_RS06405 PF09438 Domain of unknown function (DUF2017) AFR_RS06410 PF00248 Aldo/keto reductase family AFR_RS06415 PF14464 Prokaryotic homologs of the JAB domain AFR_RS06420 PF02597 ThiS family AFR_RS06425 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS06435 PF12706 Beta-lactamase superfamily domain AFR_RS06440 PF13579 Glycosyl transferase 4-like domain AFR_RS06440 PF00534 Glycosyl transferases group 1 AFR_RS06445 PF01138 3' exoribonuclease family, domain 1 AFR_RS06445 PF03725 3' exoribonuclease family, domain 2 AFR_RS06450 PF01725 Ham1 family AFR_RS06460 PF00005 ABC transporter AFR_RS06480 PF00221 Aromatic amino acid lyase AFR_RS06485 PF01979 Amidohydrolase family AFR_RS06490 PF01979 Amidohydrolase family AFR_RS06495 PF07687 Peptidase dimerisation domain AFR_RS06495 PF01546 Peptidase family M20/M25/M40 AFR_RS06500 PF01175 Urocanase Rossmann-like domain AFR_RS06500 PF17391 Urocanase N-terminal domain AFR_RS06500 PF17392 Urocanase C-terminal domain AFR_RS06550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS06555 PF00578 AhpC/TSA family AFR_RS06575 PF04542 Sigma-70 region 2 AFR_RS06575 PF08281 Sigma-70, region 4 AFR_RS06580 PF04234 CopC domain AFR_RS06590 PF00929 Exonuclease AFR_RS06650 PF00293 NUDIX domain AFR_RS06705 PF03707 Bacterial signalling protein N terminal repeat AFR_RS06705 PF00563 EAL domain AFR_RS06705 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS06710 PF00486 Transcriptional regulatory protein, C terminal AFR_RS06710 PF00498 FHA domain AFR_RS06710 PF03704 Bacterial transcriptional activator domain AFR_RS06725 PF01266 FAD dependent oxidoreductase AFR_RS06730 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS06735 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS06745 PF08402 TOBE domain AFR_RS06745 PF00005 ABC transporter AFR_RS06750 PF00171 Aldehyde dehydrogenase family AFR_RS06760 PF08406 CbbQ/NirQ/NorQ C-terminal AFR_RS06760 PF07728 AAA domain (dynein-related subfamily) AFR_RS06780 PF08281 Sigma-70, region 4 AFR_RS06780 PF04542 Sigma-70 region 2 AFR_RS06800 PF00072 Response regulator receiver domain AFR_RS06800 PF00196 Bacterial regulatory proteins, luxR family AFR_RS06805 PF13492 GAF domain AFR_RS06805 PF07730 Histidine kinase AFR_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS06815 PF00005 ABC transporter AFR_RS06820 PF00005 ABC transporter AFR_RS06845 PF03734 L,D-transpeptidase catalytic domain AFR_RS06845 PF17964 Bacterial Ig domain AFR_RS06850 PF03734 L,D-transpeptidase catalytic domain AFR_RS06850 PF17964 Bacterial Ig domain AFR_RS06865 PF00931 NB-ARC domain AFR_RS06865 PF00931 NB-ARC domain AFR_RS06865 PF00486 Transcriptional regulatory protein, C terminal AFR_RS06865 PF00486 Transcriptional regulatory protein, C terminal AFR_RS06865 PF03704 Bacterial transcriptional activator domain AFR_RS06865 PF03704 Bacterial transcriptional activator domain AFR_RS06875 PF00072 Response regulator receiver domain AFR_RS06890 PF00437 Type II/IV secretion system protein AFR_RS06930 PF09997 Predicted membrane protein (DUF2238) AFR_RS06955 PF04229 GrpB protein AFR_RS06960 PF01544 CorA-like Mg2+ transporter protein AFR_RS06970 PF00005 ABC transporter AFR_RS06970 PF13732 Domain of unknown function (DUF4162) AFR_RS06980 PF01979 Amidohydrolase family AFR_RS06995 PF01022 Bacterial regulatory protein, arsR family AFR_RS07000 PF00296 Luciferase-like monooxygenase AFR_RS07005 PF00293 NUDIX domain AFR_RS07010 PF00583 Acetyltransferase (GNAT) family AFR_RS07015 PF02838 Glycosyl hydrolase family 20, domain 2 AFR_RS07015 PF00728 Glycosyl hydrolase family 20, catalytic domain AFR_RS07035 PF04075 F420H(2)-dependent quinone reductase AFR_RS07040 PF08279 HTH domain AFR_RS07040 PF13280 WYL domain AFR_RS07075 PF03704 Bacterial transcriptional activator domain AFR_RS07075 PF00486 Transcriptional regulatory protein, C terminal AFR_RS07075 PF00498 FHA domain AFR_RS07085 PF10282 Lactonase, 7-bladed beta-propeller AFR_RS07105 PF00480 ROK family AFR_RS07110 PF01261 Xylose isomerase-like TIM barrel AFR_RS07115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS07115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS07120 PF07690 Major Facilitator Superfamily AFR_RS07125 PF00128 Alpha amylase, catalytic domain AFR_RS07135 PF00563 EAL domain AFR_RS07135 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS07135 PF03707 Bacterial signalling protein N terminal repeat AFR_RS07155 PF02223 Thymidylate kinase AFR_RS07165 PF00140 Sigma-70 factor, region 1.2 AFR_RS07165 PF04545 Sigma-70, region 4 AFR_RS07165 PF04539 Sigma-70 region 3 AFR_RS07165 PF04542 Sigma-70 region 2 AFR_RS07170 PF00877 NlpC/P60 family AFR_RS07170 PF01476 LysM domain AFR_RS07170 PF08239 Bacterial SH3 domain AFR_RS07175 PF12823 Domain of unknown function (DUF3817) AFR_RS07215 PF03992 Antibiotic biosynthesis monooxygenase AFR_RS07220 PF07690 Major Facilitator Superfamily AFR_RS07240 PF00196 Bacterial regulatory proteins, luxR family AFR_RS07240 PF00072 Response regulator receiver domain AFR_RS07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS07260 PF13732 Domain of unknown function (DUF4162) AFR_RS07260 PF00005 ABC transporter AFR_RS07265 PF01061 ABC-2 type transporter AFR_RS07275 PF01047 MarR family AFR_RS07280 PF01494 FAD binding domain AFR_RS07295 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS07295 PF00672 HAMP domain AFR_RS07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS07300 PF00072 Response regulator receiver domain AFR_RS07300 PF00486 Transcriptional regulatory protein, C terminal AFR_RS07315 PF00005 ABC transporter AFR_RS07320 PF12704 MacB-like periplasmic core domain AFR_RS07320 PF02687 FtsX-like permease family AFR_RS07335 PF04542 Sigma-70 region 2 AFR_RS07335 PF08281 Sigma-70, region 4 AFR_RS07340 PF12680 SnoaL-like domain AFR_RS07340 PF04542 Sigma-70 region 2 AFR_RS07340 PF08281 Sigma-70, region 4 AFR_RS07370 PF00436 Single-strand binding protein family AFR_RS07375 PF03186 CobD/Cbib protein AFR_RS07380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFR_RS07380 PF07685 CobB/CobQ-like glutamine amidotransferase domain AFR_RS07390 PF01435 Peptidase family M48 AFR_RS07395 PF07687 Peptidase dimerisation domain AFR_RS07395 PF01546 Peptidase family M20/M25/M40 AFR_RS07400 PF01494 FAD binding domain AFR_RS07415 PF04679 ATP dependent DNA ligase C terminal region AFR_RS07415 PF01068 ATP dependent DNA ligase domain AFR_RS07430 PF07685 CobB/CobQ-like glutamine amidotransferase domain AFR_RS07430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFR_RS07435 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AFR_RS07440 PF00912 Transglycosylase AFR_RS07440 PF17092 Penicillin-binding protein OB-like domain AFR_RS07440 PF00905 Penicillin binding protein transpeptidase domain AFR_RS07445 PF00155 Aminotransferase class I and II AFR_RS07450 PF02277 Phosphoribosyltransferase AFR_RS07455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS07455 PF14824 Sirohaem biosynthesis protein central AFR_RS07455 PF10414 Sirohaem synthase dimerisation region AFR_RS07465 PF00982 Glycosyltransferase family 20 AFR_RS07475 PF00005 ABC transporter AFR_RS07475 PF12848 ABC transporter AFR_RS07500 PF01152 Bacterial-like globin AFR_RS07510 PF00924 Mechanosensitive ion channel AFR_RS07535 PF17174 Domain of unknown function (DUF5130) AFR_RS07545 PF01433 Peptidase family M1 domain AFR_RS07545 PF11838 ERAP1-like C-terminal domain AFR_RS07550 PF01323 DSBA-like thioredoxin domain AFR_RS07565 PF07859 alpha/beta hydrolase fold AFR_RS07570 PF02502 Ribose/Galactose Isomerase AFR_RS07580 PF17668 Acetyltransferase (GNAT) domain AFR_RS07580 PF13530 Sterol carrier protein domain AFR_RS07595 PF00188 Cysteine-rich secretory protein family AFR_RS07625 PF05698 Bacterial trigger factor protein (TF) C-terminus AFR_RS07625 PF05697 Bacterial trigger factor protein (TF) AFR_RS07625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFR_RS07630 PF00574 Clp protease AFR_RS07635 PF00574 Clp protease AFR_RS07640 PF10431 C-terminal, D2-small domain, of ClpB protein AFR_RS07640 PF07724 AAA domain (Cdc48 subfamily) AFR_RS07640 PF06689 ClpX C4-type zinc finger AFR_RS07650 PF00795 Carbon-nitrogen hydrolase AFR_RS07685 PF08264 Anticodon-binding domain of tRNA AFR_RS07685 PF00133 tRNA synthetases class I (I, L, M and V) AFR_RS07685 PF10458 Valyl tRNA synthetase tRNA binding arm AFR_RS07690 PF02875 Mur ligase family, glutamate ligase domain AFR_RS07690 PF08245 Mur ligase middle domain AFR_RS07715 PF00334 Nucleoside diphosphate kinase AFR_RS07725 PF09423 PhoD-like phosphatase AFR_RS07725 PF16655 PhoD-like phosphatase, N-terminal domain AFR_RS07730 PF08264 Anticodon-binding domain of tRNA AFR_RS07730 PF00133 tRNA synthetases class I (I, L, M and V) AFR_RS07740 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AFR_RS07750 PF12697 Alpha/beta hydrolase family AFR_RS07755 PF13466 STAS domain AFR_RS07755 PF13581 Histidine kinase-like ATPase domain AFR_RS07755 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS07755 PF08448 PAS fold AFR_RS07775 PF10150 Ribonuclease E/G family AFR_RS07785 PF00829 Ribosomal prokaryotic L21 protein AFR_RS07790 PF01016 Ribosomal L27 protein AFR_RS07795 PF09269 Domain of unknown function (DUF1967) AFR_RS07795 PF01018 GTP1/OBG AFR_RS07795 PF01926 50S ribosome-binding GTPase AFR_RS07800 PF00583 Acetyltransferase (GNAT) family AFR_RS07815 PF11838 ERAP1-like C-terminal domain AFR_RS07815 PF01433 Peptidase family M1 domain AFR_RS07820 PF08448 PAS fold AFR_RS07820 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS07820 PF13188 PAS domain AFR_RS07820 PF00072 Response regulator receiver domain AFR_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS07825 PF01467 Cytidylyltransferase-like AFR_RS07835 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS07845 PF02645 Uncharacterised protein, DegV family COG1307 AFR_RS07855 PF05175 Methyltransferase small domain AFR_RS07855 PF17827 PrmC N-terminal domain AFR_RS07860 PF10531 SLBB domain AFR_RS07865 PF13567 Domain of unknown function (DUF4131) AFR_RS07865 PF03772 Competence protein AFR_RS07865 PF00753 Metallo-beta-lactamase superfamily AFR_RS07875 PF17678 Glycosyl hydrolase family 92 N-terminal domain AFR_RS07875 PF07971 Glycosyl hydrolase family 92 AFR_RS07890 PF01649 Ribosomal protein S20 AFR_RS07910 PF00679 Elongation factor G C-terminus AFR_RS07910 PF00009 Elongation factor Tu GTP binding domain AFR_RS07910 PF03144 Elongation factor Tu domain 2 AFR_RS07910 PF06421 GTP-binding protein LepA C-terminus AFR_RS07930 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS07935 PF04055 Radical SAM superfamily AFR_RS07945 PF01628 HrcA protein C terminal domain AFR_RS07950 PF00226 DnaJ domain AFR_RS07950 PF00684 DnaJ central domain AFR_RS07950 PF01556 DnaJ C terminal domain AFR_RS07955 PF04452 RNA methyltransferase AFR_RS07960 PF01032 FecCD transport family AFR_RS07965 PF01032 FecCD transport family AFR_RS07970 PF00005 ABC transporter AFR_RS07975 PF03621 MbtH-like protein AFR_RS07980 PF00664 ABC transporter transmembrane region AFR_RS07980 PF00005 ABC transporter AFR_RS07985 PF00005 ABC transporter AFR_RS07985 PF00664 ABC transporter transmembrane region AFR_RS08000 PF02261 Aspartate decarboxylase AFR_RS08015 PF01370 NAD dependent epimerase/dehydratase family AFR_RS08015 PF02911 Formyl transferase, C-terminal domain AFR_RS08015 PF00551 Formyl transferase AFR_RS08020 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AFR_RS08040 PF14310 Fibronectin type III-like domain AFR_RS08040 PF07691 PA14 domain AFR_RS08040 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS08040 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS08050 PF01230 HIT domain AFR_RS08055 PF00144 Beta-lactamase AFR_RS08060 PF02562 PhoH-like protein AFR_RS08065 PF02130 Uncharacterized protein family UPF0054 AFR_RS08070 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS08070 PF03471 Transporter associated domain AFR_RS08070 PF00571 CBS domain AFR_RS08080 PF01926 50S ribosome-binding GTPase AFR_RS08080 PF07650 KH domain AFR_RS08100 PF11967 Recombination protein O N terminal AFR_RS08100 PF02565 Recombination protein O C terminal AFR_RS08105 PF01255 Putative undecaprenyl diphosphate synthase AFR_RS08120 PF01910 Thiamine-binding protein AFR_RS08145 PF00005 ABC transporter AFR_RS08150 PF09819 ABC-type cobalt transport system, permease component AFR_RS08155 PF00561 alpha/beta hydrolase fold AFR_RS08170 PF01475 Ferric uptake regulator family AFR_RS08175 PF01022 Bacterial regulatory protein, arsR family AFR_RS08180 PF00950 ABC 3 transport family AFR_RS08185 PF00005 ABC transporter AFR_RS08190 PF01297 Zinc-uptake complex component A periplasmic AFR_RS08190 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AFR_RS08210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS08210 PF03129 Anticodon binding domain AFR_RS08215 PF13478 XdhC Rossmann domain AFR_RS08215 PF02625 XdhC and CoxI family AFR_RS08220 PF01207 Dihydrouridine synthase (Dus) AFR_RS08235 PF03259 Roadblock/LC7 domain AFR_RS08260 PF00672 HAMP domain AFR_RS08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS08265 PF01966 HD domain AFR_RS08265 PF13286 Phosphohydrolase-associated domain AFR_RS08270 PF08275 DNA primase catalytic core, N-terminal domain AFR_RS08270 PF10410 DnaB-helicase binding domain of primase AFR_RS08270 PF01807 CHC2 zinc finger AFR_RS08270 PF08278 DNA primase DnaG DnaB-binding AFR_RS08270 PF13662 Toprim domain AFR_RS08280 PF00005 ABC transporter AFR_RS08295 PF03631 Virulence factor BrkB AFR_RS08300 PF00480 ROK family AFR_RS08305 PF00005 ABC transporter AFR_RS08310 PF02653 Branched-chain amino acid transport system / permease component AFR_RS08320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS08320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS08345 PF01593 Flavin containing amine oxidoreductase AFR_RS08370 PF00815 Histidinol dehydrogenase AFR_RS08415 PF01022 Bacterial regulatory protein, arsR family AFR_RS08425 PF01451 Low molecular weight phosphotyrosine protein phosphatase AFR_RS08535 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS08535 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS08545 PF00171 Aldehyde dehydrogenase family AFR_RS08550 PF00588 SpoU rRNA Methylase family AFR_RS08555 PF01636 Phosphotransferase enzyme family AFR_RS08570 PF08241 Methyltransferase domain AFR_RS08595 PF02733 Dak1 domain AFR_RS08600 PF00750 tRNA synthetases class I (R) AFR_RS08600 PF05746 DALR anticodon binding domain AFR_RS08600 PF03485 Arginyl tRNA synthetase N terminal domain AFR_RS08625 PF17863 AAA lid domain AFR_RS08625 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS08645 PF02872 5'-nucleotidase, C-terminal domain AFR_RS08645 PF00149 Calcineurin-like phosphoesterase AFR_RS08660 PF13411 MerR HTH family regulatory protein AFR_RS08665 PF00069 Protein kinase domain AFR_RS08680 PF03793 PASTA domain AFR_RS08680 PF00069 Protein kinase domain AFR_RS08685 PF01975 Survival protein SurE AFR_RS08695 PF01494 FAD binding domain AFR_RS08700 PF00440 Bacterial regulatory proteins, tetR family AFR_RS08700 PF13305 Tetracyclin repressor-like, C-terminal domain AFR_RS08705 PF00107 Zinc-binding dehydrogenase AFR_RS08705 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS08710 PF00440 Bacterial regulatory proteins, tetR family AFR_RS08710 PF16925 Tetracyclin repressor-like, C-terminal domain AFR_RS08715 PF00891 O-methyltransferase domain AFR_RS08715 PF16864 Dimerisation domain AFR_RS08725 PF01545 Cation efflux family AFR_RS08735 PF13538 UvrD-like helicase C-terminal domain AFR_RS08745 PF00484 Carbonic anhydrase AFR_RS08760 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS08765 PF12833 Helix-turn-helix domain AFR_RS08765 PF12852 Cupin AFR_RS08770 PF00550 Phosphopantetheine attachment site AFR_RS08770 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS08770 PF08659 KR domain AFR_RS08770 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS08770 PF14765 Polyketide synthase dehydratase AFR_RS08770 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS08770 PF00698 Acyl transferase domain AFR_RS08770 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS08775 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS08775 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS08780 PF00550 Phosphopantetheine attachment site AFR_RS08785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFR_RS08785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFR_RS08790 PF00698 Acyl transferase domain AFR_RS08795 PF13556 PucR C-terminal helix-turn-helix domain AFR_RS08795 PF17853 GGDEF-like domain AFR_RS08825 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFR_RS08835 PF07690 Major Facilitator Superfamily AFR_RS08850 PF00672 HAMP domain AFR_RS08850 PF02203 Tar ligand binding domain homologue AFR_RS08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS08855 PF00456 Transketolase, thiamine diphosphate binding domain AFR_RS08855 PF17831 Pyruvate dehydrogenase E1 component middle domain AFR_RS08860 PF01894 Uncharacterised protein family UPF0047 AFR_RS08870 PF00005 ABC transporter AFR_RS08870 PF13732 Domain of unknown function (DUF4162) AFR_RS08880 PF02779 Transketolase, pyrimidine binding domain AFR_RS08880 PF02780 Transketolase, C-terminal domain AFR_RS08885 PF11253 Protein of unknown function (DUF3052) AFR_RS08890 PF00578 AhpC/TSA family AFR_RS08930 PF00293 NUDIX domain AFR_RS08950 PF13192 Thioredoxin domain AFR_RS08950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS08960 PF01209 ubiE/COQ5 methyltransferase family AFR_RS08985 PF01784 NIF3 (NGG1p interacting factor 3) AFR_RS08995 PF13456 Reverse transcriptase-like AFR_RS08995 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS09000 PF00553 Cellulose binding domain AFR_RS09000 PF00704 Glycosyl hydrolases family 18 AFR_RS09000 PF00041 Fibronectin type III domain AFR_RS09010 PF00474 Sodium:solute symporter family AFR_RS09020 PF01925 Sulfite exporter TauE/SafE AFR_RS09050 PF00158 Sigma-54 interaction domain AFR_RS09050 PF02954 Bacterial regulatory protein, Fis family AFR_RS09050 PF00072 Response regulator receiver domain AFR_RS09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS09055 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS09055 PF08446 PAS fold AFR_RS09055 PF00360 Phytochrome region AFR_RS09055 PF01590 GAF domain AFR_RS09060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFR_RS09060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFR_RS09065 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS09065 PF13291 ACT domain AFR_RS09080 PF03466 LysR substrate binding domain AFR_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS09090 PF00925 GTP cyclohydrolase II AFR_RS09100 PF08241 Methyltransferase domain AFR_RS09105 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFR_RS09105 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFR_RS09130 PF00773 RNB domain AFR_RS09130 PF00575 S1 RNA binding domain AFR_RS09130 PF08206 Ribonuclease B OB domain AFR_RS09130 PF17876 Cold shock domain AFR_RS09140 PF02548 Ketopantoate hydroxymethyltransferase AFR_RS09145 PF00795 Carbon-nitrogen hydrolase AFR_RS09145 PF02540 NAD synthase AFR_RS09150 PF03951 Glutamine synthetase, beta-Grasp domain AFR_RS09150 PF00120 Glutamine synthetase, catalytic domain AFR_RS09155 PF03994 Domain of Unknown Function (DUF350) AFR_RS09160 PF06772 Bacterial low temperature requirement A protein (LtrA) AFR_RS09165 PF00583 Acetyltransferase (GNAT) family AFR_RS09170 PF00117 Glutamine amidotransferase class-I AFR_RS09170 PF04715 Anthranilate synthase component I, N terminal region AFR_RS09170 PF00425 chorismate binding enzyme AFR_RS09175 PF08335 GlnD PII-uridylyltransferase AFR_RS09175 PF03710 Glutamate-ammonia ligase adenylyltransferase AFR_RS09215 PF00196 Bacterial regulatory proteins, luxR family AFR_RS09230 PF00120 Glutamine synthetase, catalytic domain AFR_RS09230 PF03951 Glutamine synthetase, beta-Grasp domain AFR_RS09235 PF00589 Phage integrase family AFR_RS09235 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS09275 PF00931 NB-ARC domain AFR_RS09275 PF03704 Bacterial transcriptional activator domain AFR_RS09275 PF00486 Transcriptional regulatory protein, C terminal AFR_RS09280 PF03091 CutA1 divalent ion tolerance protein AFR_RS09305 PF13829 Domain of unknown function (DUF4191) AFR_RS09320 PF04542 Sigma-70 region 2 AFR_RS09320 PF08281 Sigma-70, region 4 AFR_RS09340 PF04055 Radical SAM superfamily AFR_RS09340 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AFR_RS09345 PF01336 OB-fold nucleic acid binding domain AFR_RS09345 PF00152 tRNA synthetases class II (D, K and N) AFR_RS09355 PF03099 Biotin/lipoate A/B protein ligase family AFR_RS09365 PF01370 NAD dependent epimerase/dehydratase family AFR_RS09365 PF08338 Domain of unknown function (DUF1731) AFR_RS09370 PF02817 e3 binding domain AFR_RS09370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFR_RS09370 PF00364 Biotin-requiring enzyme AFR_RS09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS09375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS09385 PF02789 Cytosol aminopeptidase family, N-terminal domain AFR_RS09385 PF00883 Cytosol aminopeptidase family, catalytic domain AFR_RS09390 PF08669 Glycine cleavage T-protein C-terminal barrel domain AFR_RS09390 PF01571 Aminomethyltransferase folate-binding domain AFR_RS09395 PF02654 Cobalamin-5-phosphate synthase AFR_RS09400 PF02277 Phosphoribosyltransferase AFR_RS09415 PF00248 Aldo/keto reductase family AFR_RS09435 PF00005 ABC transporter AFR_RS09445 PF03591 AzlC protein AFR_RS09460 PF11241 Protein of unknown function (DUF3043) AFR_RS09465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFR_RS09470 PF02445 Quinolinate synthetase A protein AFR_RS09475 PF02595 Glycerate kinase family AFR_RS09480 PF01521 Iron-sulphur cluster biosynthesis AFR_RS09485 PF00294 pfkB family carbohydrate kinase AFR_RS09495 PF01206 Sulfurtransferase TusA AFR_RS09500 PF00266 Aminotransferase class-V AFR_RS09505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFR_RS09510 PF12270 Cytochrome c oxidase subunit IV AFR_RS09520 PF00591 Glycosyl transferase family, a/b domain AFR_RS09520 PF02885 Glycosyl transferase family, helical bundle domain AFR_RS09530 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AFR_RS09530 PF05425 Copper resistance protein D AFR_RS09535 PF00510 Cytochrome c oxidase subunit III AFR_RS09540 PF00034 Cytochrome c AFR_RS09540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AFR_RS09545 PF00355 Rieske [2Fe-2S] domain AFR_RS09550 PF13631 Cytochrome b(N-terminal)/b6/petB AFR_RS09570 PF00483 Nucleotidyl transferase AFR_RS09575 PF00293 NUDIX domain AFR_RS09575 PF09297 NADH pyrophosphatase zinc ribbon domain AFR_RS09575 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AFR_RS09580 PF02824 TGS domain AFR_RS09580 PF13291 ACT domain AFR_RS09580 PF04607 Region found in RelA / SpoT proteins AFR_RS09585 PF00929 Exonuclease AFR_RS09585 PF01541 GIY-YIG catalytic domain AFR_RS09600 PF01435 Peptidase family M48 AFR_RS09600 PF16491 CAAX prenyl protease N-terminal, five membrane helices AFR_RS09605 PF13439 Glycosyltransferase Family 4 AFR_RS09605 PF00534 Glycosyl transferases group 1 AFR_RS09610 PF00664 ABC transporter transmembrane region AFR_RS09610 PF00005 ABC transporter AFR_RS09620 PF08281 Sigma-70, region 4 AFR_RS09620 PF04542 Sigma-70 region 2 AFR_RS09630 PF00005 ABC transporter AFR_RS09650 PF00196 Bacterial regulatory proteins, luxR family AFR_RS09650 PF00072 Response regulator receiver domain AFR_RS09655 PF17200 Single Cache domain 2 AFR_RS09655 PF07730 Histidine kinase AFR_RS09665 PF00480 ROK family AFR_RS09685 PF00982 Glycosyltransferase family 20 AFR_RS09700 PF00027 Cyclic nucleotide-binding domain AFR_RS09700 PF13545 Crp-like helix-turn-helix domain AFR_RS09710 PF16473 3' exoribonuclease, RNase T-like AFR_RS09725 PF00440 Bacterial regulatory proteins, tetR family AFR_RS09725 PF17754 MftR C-terminal domain AFR_RS09735 PF00365 Phosphofructokinase AFR_RS09740 PF03807 NADP oxidoreductase coenzyme F420-dependent AFR_RS09740 PF14748 Pyrroline-5-carboxylate reductase dimerisation AFR_RS09750 PF00255 Glutathione peroxidase AFR_RS09755 PF00704 Glycosyl hydrolases family 18 AFR_RS09755 PF00553 Cellulose binding domain AFR_RS09755 PF00041 Fibronectin type III domain AFR_RS09760 PF01474 Class-II DAHP synthetase family AFR_RS09765 PF01212 Beta-eliminating lyase AFR_RS09775 PF00698 Acyl transferase domain AFR_RS09775 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS09775 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS09775 PF08659 KR domain AFR_RS09775 PF00550 Phosphopantetheine attachment site AFR_RS09775 PF14765 Polyketide synthase dehydratase AFR_RS09775 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS09775 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS09795 PF01261 Xylose isomerase-like TIM barrel AFR_RS09800 PF03793 PASTA domain AFR_RS09800 PF00069 Protein kinase domain AFR_RS09830 PF00348 Polyprenyl synthetase AFR_RS09835 PF02219 Methylenetetrahydrofolate reductase AFR_RS09860 PF07690 Major Facilitator Superfamily AFR_RS09875 PF01494 FAD binding domain AFR_RS09890 PF02223 Thymidylate kinase AFR_RS09900 PF13183 4Fe-4S dicluster domain AFR_RS09900 PF13085 2Fe-2S iron-sulfur cluster binding domain AFR_RS09905 PF02910 Fumarate reductase flavoprotein C-term AFR_RS09905 PF00890 FAD binding domain AFR_RS09915 PF03466 LysR substrate binding domain AFR_RS09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS09925 PF13460 NAD(P)H-binding AFR_RS09930 PF01047 MarR family AFR_RS09935 PF01593 Flavin containing amine oxidoreductase AFR_RS09940 PF00535 Glycosyl transferase family 2 AFR_RS09960 PF04073 Aminoacyl-tRNA editing domain AFR_RS09960 PF03129 Anticodon binding domain AFR_RS09960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS09975 PF00106 short chain dehydrogenase AFR_RS09995 PF02811 PHP domain AFR_RS09995 PF14579 Helix-hairpin-helix motif AFR_RS09995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFR_RS09995 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFR_RS10005 PF00082 Subtilase family AFR_RS10005 PF05922 Peptidase inhibitor I9 AFR_RS10020 PF00817 impB/mucB/samB family AFR_RS10020 PF11798 IMS family HHH motif AFR_RS10020 PF11799 impB/mucB/samB family C-terminal domain AFR_RS10030 PF11992 Domain of unknown function (DUF3488) AFR_RS10030 PF13559 Domain of unknown function (DUF4129) AFR_RS10030 PF01841 Transglutaminase-like superfamily AFR_RS10040 PF17863 AAA lid domain AFR_RS10040 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS10045 PF09334 tRNA synthetases class I (M) AFR_RS10045 PF13603 Leucyl-tRNA synthetase, Domain 2 AFR_RS10045 PF08264 Anticodon-binding domain of tRNA AFR_RS10050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFR_RS10060 PF07685 CobB/CobQ-like glutamine amidotransferase domain AFR_RS10065 PF08245 Mur ligase middle domain AFR_RS10065 PF02875 Mur ligase family, glutamate ligase domain AFR_RS10065 PF01225 Mur ligase family, catalytic domain AFR_RS10070 PF08239 Bacterial SH3 domain AFR_RS10070 PF00877 NlpC/P60 family AFR_RS10070 PF01476 LysM domain AFR_RS10075 PF02381 MraZ protein, putative antitoxin-like AFR_RS10080 PF01795 MraW methylase family AFR_RS10090 PF00905 Penicillin binding protein transpeptidase domain AFR_RS10090 PF03717 Penicillin-binding Protein dimerisation domain AFR_RS10095 PF08245 Mur ligase middle domain AFR_RS10095 PF02875 Mur ligase family, glutamate ligase domain AFR_RS10095 PF01225 Mur ligase family, catalytic domain AFR_RS10100 PF01225 Mur ligase family, catalytic domain AFR_RS10100 PF02875 Mur ligase family, glutamate ligase domain AFR_RS10100 PF08245 Mur ligase middle domain AFR_RS10105 PF00953 Glycosyl transferase family 4 AFR_RS10105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AFR_RS10110 PF01098 Cell cycle protein AFR_RS10115 PF03033 Glycosyltransferase family 28 N-terminal domain AFR_RS10115 PF04101 Glycosyltransferase family 28 C-terminal domain AFR_RS10120 PF08245 Mur ligase middle domain AFR_RS10120 PF02875 Mur ligase family, glutamate ligase domain AFR_RS10120 PF01225 Mur ligase family, catalytic domain AFR_RS10125 PF08478 POTRA domain, FtsQ-type AFR_RS10125 PF03799 Cell division protein FtsQ AFR_RS10130 PF00091 Tubulin/FtsZ family, GTPase domain AFR_RS10130 PF12327 FtsZ family, C-terminal domain AFR_RS10135 PF01168 Alanine racemase, N-terminal domain AFR_RS10140 PF04472 Cell division protein SepF AFR_RS10150 PF05103 DivIVA protein AFR_RS10170 PF00999 Sodium/hydrogen exchanger family AFR_RS10170 PF02080 TrkA-C domain AFR_RS10170 PF03471 Transporter associated domain AFR_RS10180 PF01252 Signal peptidase (SPase) II AFR_RS10185 PF00849 RNA pseudouridylate synthase AFR_RS10200 PF14579 Helix-hairpin-helix motif AFR_RS10200 PF02811 PHP domain AFR_RS10200 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFR_RS10200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFR_RS10215 PF00815 Histidinol dehydrogenase AFR_RS10220 PF00155 Aminotransferase class I and II AFR_RS10225 PF00475 Imidazoleglycerol-phosphate dehydratase AFR_RS10230 PF00117 Glutamine amidotransferase class-I AFR_RS10240 PF00977 Histidine biosynthesis protein AFR_RS10250 PF03466 LysR substrate binding domain AFR_RS10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS10255 PF00892 EamA-like transporter family AFR_RS10260 PF00977 Histidine biosynthesis protein AFR_RS10275 PF00155 Aminotransferase class I and II AFR_RS10280 PF01522 Polysaccharide deacetylase AFR_RS10295 PF04542 Sigma-70 region 2 AFR_RS10295 PF12680 SnoaL-like domain AFR_RS10295 PF08281 Sigma-70, region 4 AFR_RS10300 PF00501 AMP-binding enzyme AFR_RS10305 PF05922 Peptidase inhibitor I9 AFR_RS10305 PF00082 Subtilase family AFR_RS10315 PF01209 ubiE/COQ5 methyltransferase family AFR_RS10320 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS10320 PF00672 HAMP domain AFR_RS10325 PF00072 Response regulator receiver domain AFR_RS10325 PF00486 Transcriptional regulatory protein, C terminal AFR_RS10335 PF00155 Aminotransferase class I and II AFR_RS10335 PF00392 Bacterial regulatory proteins, gntR family AFR_RS10350 PF00005 ABC transporter AFR_RS10350 PF00664 ABC transporter transmembrane region AFR_RS10355 PF00005 ABC transporter AFR_RS10355 PF00664 ABC transporter transmembrane region AFR_RS10360 PF01479 S4 domain AFR_RS10360 PF00163 Ribosomal protein S4/S9 N-terminal domain AFR_RS10370 PF00440 Bacterial regulatory proteins, tetR family AFR_RS10380 PF00005 ABC transporter AFR_RS10390 PF01502 Phosphoribosyl-AMP cyclohydrolase AFR_RS10395 PF04715 Anthranilate synthase component I, N terminal region AFR_RS10395 PF00425 chorismate binding enzyme AFR_RS10405 PF00218 Indole-3-glycerol phosphate synthase AFR_RS10410 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS10415 PF00290 Tryptophan synthase alpha chain AFR_RS10420 PF01790 Prolipoprotein diacylglyceryl transferase AFR_RS10425 PF01494 FAD binding domain AFR_RS10435 PF04898 Glutamate synthase central domain AFR_RS10435 PF01645 Conserved region in glutamate synthase AFR_RS10435 PF00310 Glutamine amidotransferases class-II AFR_RS10435 PF01493 GXGXG motif AFR_RS10440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AFR_RS10440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS10465 PF02887 Pyruvate kinase, alpha/beta domain AFR_RS10465 PF00224 Pyruvate kinase, barrel domain AFR_RS10485 PF03861 ANTAR domain AFR_RS10485 PF00072 Response regulator receiver domain AFR_RS10495 PF02653 Branched-chain amino acid transport system / permease component AFR_RS10500 PF11862 Domain of unknown function (DUF3382) AFR_RS10500 PF02653 Branched-chain amino acid transport system / permease component AFR_RS10505 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFR_RS10505 PF00005 ABC transporter AFR_RS10510 PF00005 ABC transporter AFR_RS10515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFR_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS10525 PF00005 ABC transporter AFR_RS10530 PF01367 5'-3' exonuclease, C-terminal SAM fold AFR_RS10530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFR_RS10530 PF00476 DNA polymerase family A AFR_RS10550 PF01209 ubiE/COQ5 methyltransferase family AFR_RS10555 PF00575 S1 RNA binding domain AFR_RS10560 PF01121 Dephospho-CoA kinase AFR_RS10560 PF04229 GrpB protein AFR_RS10565 PF02151 UvrB/uvrC motif AFR_RS10565 PF00271 Helicase conserved C-terminal domain AFR_RS10565 PF04851 Type III restriction enzyme, res subunit AFR_RS10565 PF17757 UvrB interaction domain AFR_RS10565 PF12344 Ultra-violet resistance protein B AFR_RS10580 PF03992 Antibiotic biosynthesis monooxygenase AFR_RS10585 PF03741 Integral membrane protein TerC family AFR_RS10590 PF14492 Elongation Factor G, domain II AFR_RS10590 PF00009 Elongation factor Tu GTP binding domain AFR_RS10590 PF03144 Elongation factor Tu domain 2 AFR_RS10590 PF00679 Elongation factor G C-terminus AFR_RS10600 PF03946 Ribosomal protein L11, N-terminal domain AFR_RS10600 PF00298 Ribosomal protein L11, RNA binding domain AFR_RS10605 PF00574 Clp protease AFR_RS10610 PF00857 Isochorismatase family AFR_RS10615 PF00753 Metallo-beta-lactamase superfamily AFR_RS10625 PF03193 RsgA GTPase AFR_RS10635 PF17760 UvrA interaction domain AFR_RS10635 PF17755 UvrA DNA-binding domain AFR_RS10635 PF00005 ABC transporter AFR_RS10645 PF01541 GIY-YIG catalytic domain AFR_RS10645 PF02151 UvrB/uvrC motif AFR_RS10645 PF08459 UvrC Helix-hairpin-helix N-terminal AFR_RS10650 PF03668 P-loop ATPase protein family AFR_RS10655 PF01933 Uncharacterised protein family UPF0052 AFR_RS10660 PF14527 WhiA LAGLIDADG-like domain AFR_RS10660 PF02650 WhiA C-terminal HTH domain AFR_RS10660 PF10298 WhiA N-terminal LAGLIDADG-like domain AFR_RS10665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFR_RS10665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFR_RS10670 PF00162 Phosphoglycerate kinase AFR_RS10675 PF00121 Triosephosphate isomerase AFR_RS10680 PF03840 Preprotein translocase SecG subunit AFR_RS10690 PF00583 Acetyltransferase (GNAT) family AFR_RS10700 PF04542 Sigma-70 region 2 AFR_RS10700 PF08281 Sigma-70, region 4 AFR_RS10710 PF01313 Bacterial export proteins, family 3 AFR_RS10715 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AFR_RS10725 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFR_RS10725 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFR_RS10735 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFR_RS10740 PF02780 Transketolase, C-terminal domain AFR_RS10740 PF02779 Transketolase, pyrimidine binding domain AFR_RS10740 PF00456 Transketolase, thiamine diphosphate binding domain AFR_RS10745 PF01040 UbiA prenyltransferase family AFR_RS10755 PF02628 Cytochrome oxidase assembly protein AFR_RS10765 PF01458 Uncharacterized protein family (UPF0051) AFR_RS10770 PF01458 Uncharacterized protein family (UPF0051) AFR_RS10775 PF00355 Rieske [2Fe-2S] domain AFR_RS10780 PF00005 ABC transporter AFR_RS10785 PF00266 Aminotransferase class-V AFR_RS10790 PF01592 NifU-like N terminal domain AFR_RS10795 PF01883 Iron-sulfur cluster assembly protein AFR_RS10805 PF00107 Zinc-binding dehydrogenase AFR_RS10805 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS10810 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFR_RS10815 PF08450 SMP-30/Gluconolactonase/LRE-like region AFR_RS10820 PF01614 Bacterial transcriptional regulator AFR_RS10820 PF09339 IclR helix-turn-helix domain AFR_RS10825 PF00920 Dehydratase family AFR_RS10835 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS10875 PF04228 Putative neutral zinc metallopeptidase AFR_RS10880 PF00005 ABC transporter AFR_RS10880 PF12848 ABC transporter AFR_RS10880 PF16326 ABC transporter C-terminal domain AFR_RS10890 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS10895 PF00005 ABC transporter AFR_RS10895 PF00664 ABC transporter transmembrane region AFR_RS10910 PF13302 Acetyltransferase (GNAT) domain AFR_RS10920 PF00722 Glycosyl hydrolases family 16 AFR_RS10940 PF03167 Uracil DNA glycosylase superfamily AFR_RS10945 PF08245 Mur ligase middle domain AFR_RS10945 PF02875 Mur ligase family, glutamate ligase domain AFR_RS10945 PF01225 Mur ligase family, catalytic domain AFR_RS10985 PF05114 Protein of unknown function (DUF692) AFR_RS10995 PF00440 Bacterial regulatory proteins, tetR family AFR_RS11010 PF10944 Protein of unknown function (DUF2630) AFR_RS11015 PF03951 Glutamine synthetase, beta-Grasp domain AFR_RS11015 PF00120 Glutamine synthetase, catalytic domain AFR_RS11025 PF00486 Transcriptional regulatory protein, C terminal AFR_RS11030 PF00694 Aconitase C-terminal domain AFR_RS11030 PF00330 Aconitase family (aconitate hydratase) AFR_RS11040 PF11852 Domain of unknown function (DUF3372) AFR_RS11040 PF03714 Bacterial pullanase-associated domain AFR_RS11040 PF18494 Pullulanase Ins domain AFR_RS11040 PF17967 Pullulanase N2 domain AFR_RS11040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFR_RS11055 PF08241 Methyltransferase domain AFR_RS11060 PF00440 Bacterial regulatory proteins, tetR family AFR_RS11065 PF01494 FAD binding domain AFR_RS11070 PF00557 Metallopeptidase family M24 AFR_RS11070 PF05195 Aminopeptidase P, N-terminal domain AFR_RS11105 PF17863 AAA lid domain AFR_RS11105 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS11110 PF01882 Protein of unknown function DUF58 AFR_RS11115 PF13519 von Willebrand factor type A domain AFR_RS11115 PF07584 Aerotolerance regulator N-terminal AFR_RS11130 PF00196 Bacterial regulatory proteins, luxR family AFR_RS11130 PF00072 Response regulator receiver domain AFR_RS11135 PF07730 Histidine kinase AFR_RS11155 PF00762 Ferrochelatase AFR_RS11160 PF13344 Haloacid dehalogenase-like hydrolase AFR_RS11170 PF12697 Alpha/beta hydrolase family AFR_RS11180 PF00672 HAMP domain AFR_RS11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS11190 PF00106 short chain dehydrogenase AFR_RS11195 PF00293 NUDIX domain AFR_RS11195 PF09297 NADH pyrophosphatase zinc ribbon domain AFR_RS11220 PF00144 Beta-lactamase AFR_RS11230 PF01145 SPFH domain / Band 7 family AFR_RS11245 PF00588 SpoU rRNA Methylase family AFR_RS11250 PF13302 Acetyltransferase (GNAT) domain AFR_RS11255 PF00155 Aminotransferase class I and II AFR_RS11260 PF00175 Oxidoreductase NAD-binding domain AFR_RS11260 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS11260 PF00970 Oxidoreductase FAD-binding domain AFR_RS11275 PF08245 Mur ligase middle domain AFR_RS11280 PF01380 SIS domain AFR_RS11280 PF01418 Helix-turn-helix domain, rpiR family AFR_RS11285 PF01547 Bacterial extracellular solute-binding protein AFR_RS11290 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11295 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11300 PF01547 Bacterial extracellular solute-binding protein AFR_RS11305 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11310 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11320 PF07690 Major Facilitator Superfamily AFR_RS11325 PF14310 Fibronectin type III-like domain AFR_RS11325 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS11325 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS11335 PF01367 5'-3' exonuclease, C-terminal SAM fold AFR_RS11335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFR_RS11335 PF01612 3'-5' exonuclease AFR_RS11335 PF00476 DNA polymerase family A AFR_RS11345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS11345 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS11345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS11365 PF03259 Roadblock/LC7 domain AFR_RS11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS11370 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS11375 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS11400 PF07730 Histidine kinase AFR_RS11405 PF00196 Bacterial regulatory proteins, luxR family AFR_RS11405 PF00072 Response regulator receiver domain AFR_RS11430 PF13344 Haloacid dehalogenase-like hydrolase AFR_RS11430 PF00293 NUDIX domain AFR_RS11435 PF01047 MarR family AFR_RS11465 PF00296 Luciferase-like monooxygenase AFR_RS11475 PF00459 Inositol monophosphatase family AFR_RS11495 PF01547 Bacterial extracellular solute-binding protein AFR_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11505 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS11510 PF17912 MalK OB fold domain AFR_RS11510 PF00005 ABC transporter AFR_RS11540 PF00248 Aldo/keto reductase family AFR_RS11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS11545 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS11545 PF00672 HAMP domain AFR_RS11550 PF00072 Response regulator receiver domain AFR_RS11550 PF00486 Transcriptional regulatory protein, C terminal AFR_RS11560 PF00425 chorismate binding enzyme AFR_RS11560 PF00117 Glutamine amidotransferase class-I AFR_RS11575 PF00072 Response regulator receiver domain AFR_RS11575 PF00486 Transcriptional regulatory protein, C terminal AFR_RS11585 PF11954 Domain of unknown function (DUF3471) AFR_RS11585 PF00144 Beta-lactamase AFR_RS11590 PF00356 Bacterial regulatory proteins, lacI family AFR_RS11595 PF00128 Alpha amylase, catalytic domain AFR_RS11615 PF01638 HxlR-like helix-turn-helix AFR_RS11620 PF00248 Aldo/keto reductase family AFR_RS11630 PF04264 YceI-like domain AFR_RS11635 PF12704 MacB-like periplasmic core domain AFR_RS11635 PF02687 FtsX-like permease family AFR_RS11635 PF00005 ABC transporter AFR_RS11640 PF12704 MacB-like periplasmic core domain AFR_RS11640 PF02687 FtsX-like permease family AFR_RS11640 PF00005 ABC transporter AFR_RS11650 PF00155 Aminotransferase class I and II AFR_RS11670 PF00486 Transcriptional regulatory protein, C terminal AFR_RS11670 PF00072 Response regulator receiver domain AFR_RS11680 PF00535 Glycosyl transferase family 2 AFR_RS11690 PF03704 Bacterial transcriptional activator domain AFR_RS11690 PF00931 NB-ARC domain AFR_RS11690 PF00486 Transcriptional regulatory protein, C terminal AFR_RS11695 PF00672 HAMP domain AFR_RS11695 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS11705 PF00072 Response regulator receiver domain AFR_RS11705 PF00196 Bacterial regulatory proteins, luxR family AFR_RS11715 PF00534 Glycosyl transferases group 1 AFR_RS11715 PF13439 Glycosyltransferase Family 4 AFR_RS11720 PF02719 Polysaccharide biosynthesis protein AFR_RS11725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS11725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS11725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS11730 PF02397 Bacterial sugar transferase AFR_RS11740 PF03795 YCII-related domain AFR_RS11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS11760 PF03466 LysR substrate binding domain AFR_RS11770 PF00561 alpha/beta hydrolase fold AFR_RS11780 PF01494 FAD binding domain AFR_RS11805 PF13614 AAA domain AFR_RS11805 PF13807 G-rich domain on putative tyrosine kinase AFR_RS11805 PF02706 Chain length determinant protein AFR_RS11815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFR_RS11875 PF01569 PAP2 superfamily AFR_RS11905 PF01047 MarR family AFR_RS11905 PF00583 Acetyltransferase (GNAT) family AFR_RS11915 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS11915 PF00107 Zinc-binding dehydrogenase AFR_RS11940 PF07690 Major Facilitator Superfamily AFR_RS11945 PF09382 RQC domain AFR_RS11945 PF00270 DEAD/DEAH box helicase AFR_RS11945 PF00271 Helicase conserved C-terminal domain AFR_RS11945 PF00570 HRDC domain AFR_RS11945 PF16124 RecQ zinc-binding AFR_RS11950 PF00893 Small Multidrug Resistance protein AFR_RS11960 PF13191 AAA ATPase domain AFR_RS11960 PF00211 Adenylate and Guanylate cyclase catalytic domain AFR_RS11990 PF00557 Metallopeptidase family M24 AFR_RS12000 PF06441 Epoxide hydrolase N terminus AFR_RS12015 PF03707 Bacterial signalling protein N terminal repeat AFR_RS12015 PF00563 EAL domain AFR_RS12015 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS12025 PF03466 LysR substrate binding domain AFR_RS12040 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12050 PF00561 alpha/beta hydrolase fold AFR_RS12060 PF00931 NB-ARC domain AFR_RS12060 PF03704 Bacterial transcriptional activator domain AFR_RS12060 PF00486 Transcriptional regulatory protein, C terminal AFR_RS12070 PF00440 Bacterial regulatory proteins, tetR family AFR_RS12070 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS12105 PF06441 Epoxide hydrolase N terminus AFR_RS12115 PF13466 STAS domain AFR_RS12115 PF13581 Histidine kinase-like ATPase domain AFR_RS12115 PF08448 PAS fold AFR_RS12115 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS12120 PF00672 HAMP domain AFR_RS12120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS12125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS12125 PF08447 PAS fold AFR_RS12135 PF01022 Bacterial regulatory protein, arsR family AFR_RS12150 PF17863 AAA lid domain AFR_RS12150 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS12225 PF00313 'Cold-shock' DNA-binding domain AFR_RS12270 PF13340 Putative transposase of IS4/5 family (DUF4096) AFR_RS12275 PF01609 Transposase DDE domain AFR_RS12290 PF13340 Putative transposase of IS4/5 family (DUF4096) AFR_RS12295 PF01609 Transposase DDE domain AFR_RS12345 PF00248 Aldo/keto reductase family AFR_RS12365 PF08386 TAP-like protein AFR_RS12365 PF00561 alpha/beta hydrolase fold AFR_RS12375 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12375 PF00072 Response regulator receiver domain AFR_RS12390 PF12146 Serine aminopeptidase, S33 AFR_RS12405 PF02517 CPBP intramembrane metalloprotease AFR_RS12420 PF13426 PAS domain AFR_RS12420 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12450 PF06441 Epoxide hydrolase N terminus AFR_RS12455 PF00072 Response regulator receiver domain AFR_RS12455 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12465 PF02683 Cytochrome C biogenesis protein transmembrane region AFR_RS12470 PF00578 AhpC/TSA family AFR_RS12475 PF00141 Peroxidase AFR_RS12480 PF00230 Major intrinsic protein AFR_RS12490 PF08281 Sigma-70, region 4 AFR_RS12490 PF04542 Sigma-70 region 2 AFR_RS12495 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS12500 PF00144 Beta-lactamase AFR_RS12505 PF13193 AMP-binding enzyme C-terminal domain AFR_RS12505 PF00550 Phosphopantetheine attachment site AFR_RS12505 PF00668 Condensation domain AFR_RS12505 PF00501 AMP-binding enzyme AFR_RS12510 PF13193 AMP-binding enzyme C-terminal domain AFR_RS12510 PF00550 Phosphopantetheine attachment site AFR_RS12510 PF00668 Condensation domain AFR_RS12510 PF00501 AMP-binding enzyme AFR_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS12530 PF07730 Histidine kinase AFR_RS12530 PF05384 Sensor protein DegS AFR_RS12535 PF00072 Response regulator receiver domain AFR_RS12535 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12555 PF00350 Dynamin family AFR_RS12560 PF00350 Dynamin family AFR_RS12575 PF00072 Response regulator receiver domain AFR_RS12575 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12610 PF00989 PAS fold AFR_RS12610 PF00672 HAMP domain AFR_RS12610 PF18698 Histidine kinase sensor domain AFR_RS12610 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS12635 PF00072 Response regulator receiver domain AFR_RS12635 PF00196 Bacterial regulatory proteins, luxR family AFR_RS12650 PF02983 Alpha-lytic protease prodomain AFR_RS12660 PF00005 ABC transporter AFR_RS12670 PF00171 Aldehyde dehydrogenase family AFR_RS12680 PF09339 IclR helix-turn-helix domain AFR_RS12680 PF01614 Bacterial transcriptional regulator AFR_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS12705 PF00107 Zinc-binding dehydrogenase AFR_RS12705 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS12710 PF00698 Acyl transferase domain AFR_RS12710 PF00107 Zinc-binding dehydrogenase AFR_RS12710 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS12710 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS12710 PF08659 KR domain AFR_RS12710 PF00550 Phosphopantetheine attachment site AFR_RS12710 PF14765 Polyketide synthase dehydratase AFR_RS12710 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS12710 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS12720 PF01790 Prolipoprotein diacylglyceryl transferase AFR_RS12725 PF00970 Oxidoreductase FAD-binding domain AFR_RS12725 PF00175 Oxidoreductase NAD-binding domain AFR_RS12725 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS12775 PF04072 Leucine carboxyl methyltransferase AFR_RS12790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS12790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS12800 PF07729 FCD domain AFR_RS12800 PF00392 Bacterial regulatory proteins, gntR family AFR_RS12805 PF00180 Isocitrate/isopropylmalate dehydrogenase AFR_RS12815 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS12815 PF00107 Zinc-binding dehydrogenase AFR_RS12830 PF01385 Probable transposase AFR_RS12830 PF07282 Putative transposase DNA-binding domain AFR_RS12830 PF12323 Helix-turn-helix domain AFR_RS12855 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS12855 PF00440 Bacterial regulatory proteins, tetR family AFR_RS12870 PF04321 RmlD substrate binding domain AFR_RS12875 PF08281 Sigma-70, region 4 AFR_RS12875 PF04542 Sigma-70 region 2 AFR_RS12885 PF00005 ABC transporter AFR_RS12920 PF00440 Bacterial regulatory proteins, tetR family AFR_RS12920 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS12925 PF01494 FAD binding domain AFR_RS12930 PF04616 Glycosyl hydrolases family 43 AFR_RS12930 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AFR_RS12935 PF07532 Bacterial Ig-like domain (group 4) AFR_RS12940 PF03636 Glycosyl hydrolase family 65, N-terminal domain AFR_RS12940 PF03632 Glycosyl hydrolase family 65 central catalytic domain AFR_RS12940 PF03633 Glycosyl hydrolase family 65, C-terminal domain AFR_RS12945 PF01434 Peptidase family M41 AFR_RS12945 PF17862 AAA+ lid domain AFR_RS12945 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS12965 PF17991 Thioredoxin like C-terminal domain AFR_RS12965 PF00578 AhpC/TSA family AFR_RS12965 PF02683 Cytochrome C biogenesis protein transmembrane region AFR_RS12980 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS12980 PF00440 Bacterial regulatory proteins, tetR family AFR_RS12985 PF08031 Berberine and berberine like AFR_RS12985 PF01565 FAD binding domain AFR_RS12990 PF00106 short chain dehydrogenase AFR_RS13005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS13005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS13005 PF00403 Heavy-metal-associated domain AFR_RS13010 PF07690 Major Facilitator Superfamily AFR_RS13025 PF01817 Chorismate mutase type II AFR_RS13030 PF04545 Sigma-70, region 4 AFR_RS13030 PF04542 Sigma-70 region 2 AFR_RS13035 PF00196 Bacterial regulatory proteins, luxR family AFR_RS13035 PF00072 Response regulator receiver domain AFR_RS13040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS13040 PF00403 Heavy-metal-associated domain AFR_RS13050 PF01965 DJ-1/PfpI family AFR_RS13060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS13060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS13065 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS13065 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13085 PF00248 Aldo/keto reductase family AFR_RS13090 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13090 PF08360 QacR-like protein, C-terminal region AFR_RS13095 PF07690 Major Facilitator Superfamily AFR_RS13100 PF00144 Beta-lactamase AFR_RS13105 PF17925 Tetracyclin repressor-like, C-terminal domain AFR_RS13105 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13110 PF00107 Zinc-binding dehydrogenase AFR_RS13110 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS13115 PF01370 NAD dependent epimerase/dehydratase family AFR_RS13125 PF00106 short chain dehydrogenase AFR_RS13135 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS13135 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13140 PF12697 Alpha/beta hydrolase family AFR_RS13145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFR_RS13165 PF02653 Branched-chain amino acid transport system / permease component AFR_RS13170 PF00005 ABC transporter AFR_RS13180 PF01968 Hydantoinase/oxoprolinase AFR_RS13180 PF05378 Hydantoinase/oxoprolinase N-terminal region AFR_RS13185 PF01494 FAD binding domain AFR_RS13190 PF00561 alpha/beta hydrolase fold AFR_RS13200 PF00732 GMC oxidoreductase AFR_RS13200 PF05199 GMC oxidoreductase AFR_RS13205 PF07690 Major Facilitator Superfamily AFR_RS13205 PF00083 Sugar (and other) transporter AFR_RS13225 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS13225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFR_RS13225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFR_RS13230 PF09278 MerR, DNA binding AFR_RS13230 PF00376 MerR family regulatory protein AFR_RS13245 PF00072 Response regulator receiver domain AFR_RS13245 PF00486 Transcriptional regulatory protein, C terminal AFR_RS13250 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS13250 PF00672 HAMP domain AFR_RS13265 PF00106 short chain dehydrogenase AFR_RS13275 PF00356 Bacterial regulatory proteins, lacI family AFR_RS13280 PF07859 alpha/beta hydrolase fold AFR_RS13290 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS13310 PF00698 Acyl transferase domain AFR_RS13310 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS13310 PF08990 Erythronolide synthase docking AFR_RS13310 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS13310 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS13310 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS13310 PF14765 Polyketide synthase dehydratase AFR_RS13310 PF09277 Erythronolide synthase, docking AFR_RS13310 PF00550 Phosphopantetheine attachment site AFR_RS13310 PF08659 KR domain AFR_RS13325 PF01494 FAD binding domain AFR_RS13330 PF00672 HAMP domain AFR_RS13330 PF12729 Four helix bundle sensory module for signal transduction AFR_RS13330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS13360 PF01757 Acyltransferase family AFR_RS13365 PF04545 Sigma-70, region 4 AFR_RS13365 PF04542 Sigma-70 region 2 AFR_RS13375 PF00089 Trypsin AFR_RS13380 PF00248 Aldo/keto reductase family AFR_RS13395 PF00296 Luciferase-like monooxygenase AFR_RS13415 PF00486 Transcriptional regulatory protein, C terminal AFR_RS13415 PF00072 Response regulator receiver domain AFR_RS13420 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS13420 PF00672 HAMP domain AFR_RS13430 PF02687 FtsX-like permease family AFR_RS13430 PF12704 MacB-like periplasmic core domain AFR_RS13430 PF00005 ABC transporter AFR_RS13435 PF00106 short chain dehydrogenase AFR_RS13450 PF00128 Alpha amylase, catalytic domain AFR_RS13450 PF16657 Maltogenic Amylase, C-terminal domain AFR_RS13460 PF00106 short chain dehydrogenase AFR_RS13465 PF03466 LysR substrate binding domain AFR_RS13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS13470 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13480 PF07690 Major Facilitator Superfamily AFR_RS13510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS13510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS13510 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS13535 PF03259 Roadblock/LC7 domain AFR_RS13545 PF00392 Bacterial regulatory proteins, gntR family AFR_RS13545 PF00155 Aminotransferase class I and II AFR_RS13555 PF05362 Lon protease (S16) C-terminal proteolytic domain AFR_RS13555 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFR_RS13555 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS13565 PF00248 Aldo/keto reductase family AFR_RS13570 PF00248 Aldo/keto reductase family AFR_RS13575 PF00106 short chain dehydrogenase AFR_RS13585 PF03466 LysR substrate binding domain AFR_RS13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS13590 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AFR_RS13595 PF07690 Major Facilitator Superfamily AFR_RS13630 PF00106 short chain dehydrogenase AFR_RS13660 PF00571 CBS domain AFR_RS13660 PF00478 IMP dehydrogenase / GMP reductase domain AFR_RS13675 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13685 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13730 PF00999 Sodium/hydrogen exchanger family AFR_RS13745 PF00296 Luciferase-like monooxygenase AFR_RS13755 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS13755 PF00440 Bacterial regulatory proteins, tetR family AFR_RS13765 PF03364 Polyketide cyclase / dehydrase and lipid transport AFR_RS13770 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS13770 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS13770 PF00107 Zinc-binding dehydrogenase AFR_RS13775 PF12833 Helix-turn-helix domain AFR_RS13775 PF14525 AraC-binding-like domain AFR_RS13790 PF01554 MatE AFR_RS13825 PF00072 Response regulator receiver domain AFR_RS13825 PF00196 Bacterial regulatory proteins, luxR family AFR_RS13830 PF07730 Histidine kinase AFR_RS13840 PF00999 Sodium/hydrogen exchanger family AFR_RS13845 PF00698 Acyl transferase domain AFR_RS13845 PF08659 KR domain AFR_RS13845 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS13845 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS13845 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS13845 PF14765 Polyketide synthase dehydratase AFR_RS13845 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS13845 PF00550 Phosphopantetheine attachment site AFR_RS13850 PF09278 MerR, DNA binding AFR_RS13850 PF00376 MerR family regulatory protein AFR_RS13855 PF00535 Glycosyl transferase family 2 AFR_RS13855 PF03552 Cellulose synthase AFR_RS13855 PF07238 PilZ domain AFR_RS13875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFR_RS13875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFR_RS13875 PF06827 Zinc finger found in FPG and IleRS AFR_RS13885 PF00486 Transcriptional regulatory protein, C terminal AFR_RS13885 PF00498 FHA domain AFR_RS13885 PF03704 Bacterial transcriptional activator domain AFR_RS13905 PF03814 Potassium-transporting ATPase A subunit AFR_RS13915 PF02669 K+-transporting ATPase, c chain AFR_RS13920 PF00582 Universal stress protein family AFR_RS13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS13920 PF02702 Osmosensitive K+ channel His kinase sensor domain AFR_RS13920 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS13920 PF13493 Domain of unknown function (DUF4118) AFR_RS13970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS13970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS13975 PF01266 FAD dependent oxidoreductase AFR_RS13980 PF12867 DinB superfamily AFR_RS13980 PF03781 Sulfatase-modifying factor enzyme 1 AFR_RS14015 PF03176 MMPL family AFR_RS14030 PF01494 FAD binding domain AFR_RS14035 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS14035 PF00072 Response regulator receiver domain AFR_RS14040 PF00082 Subtilase family AFR_RS14040 PF05922 Peptidase inhibitor I9 AFR_RS14045 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14045 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS14055 PF00107 Zinc-binding dehydrogenase AFR_RS14055 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14065 PF00106 short chain dehydrogenase AFR_RS14070 PF00188 Cysteine-rich secretory protein family AFR_RS14075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS14080 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14085 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14085 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS14090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS14090 PF00005 ABC transporter AFR_RS14095 PF00005 ABC transporter AFR_RS14095 PF09383 NIL domain AFR_RS14105 PF04542 Sigma-70 region 2 AFR_RS14105 PF08281 Sigma-70, region 4 AFR_RS14120 PF04542 Sigma-70 region 2 AFR_RS14120 PF08281 Sigma-70, region 4 AFR_RS14125 PF05425 Copper resistance protein D AFR_RS14125 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AFR_RS14140 PF04261 Dyp-type peroxidase family AFR_RS14150 PF07690 Major Facilitator Superfamily AFR_RS14160 PF00072 Response regulator receiver domain AFR_RS14160 PF00196 Bacterial regulatory proteins, luxR family AFR_RS14205 PF00206 Lyase AFR_RS14205 PF10397 Adenylosuccinate lyase C-terminus AFR_RS14220 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS14220 PF00672 HAMP domain AFR_RS14235 PF07729 FCD domain AFR_RS14235 PF00392 Bacterial regulatory proteins, gntR family AFR_RS14245 PF03458 UPF0126 domain AFR_RS14260 PF13167 GTP-binding GTPase N-terminal AFR_RS14260 PF01926 50S ribosome-binding GTPase AFR_RS14260 PF16360 GTP-binding GTPase Middle Region AFR_RS14265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFR_RS14265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS14265 PF00205 Thiamine pyrophosphate enzyme, central domain AFR_RS14285 PF01042 Endoribonuclease L-PSP AFR_RS14290 PF00561 alpha/beta hydrolase fold AFR_RS14305 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14305 PF00107 Zinc-binding dehydrogenase AFR_RS14330 PF12323 Helix-turn-helix domain AFR_RS14330 PF07282 Putative transposase DNA-binding domain AFR_RS14330 PF01385 Probable transposase AFR_RS14360 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFR_RS14365 PF03176 MMPL family AFR_RS14370 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14370 PF00107 Zinc-binding dehydrogenase AFR_RS14375 PF03773 Predicted permease AFR_RS14380 PF06965 Na+/H+ antiporter 1 AFR_RS14390 PF00005 ABC transporter AFR_RS14390 PF13732 Domain of unknown function (DUF4162) AFR_RS14395 PF00144 Beta-lactamase AFR_RS14415 PF04314 Copper chaperone PCu(A)C AFR_RS14425 PF02780 Transketolase, C-terminal domain AFR_RS14425 PF02779 Transketolase, pyrimidine binding domain AFR_RS14425 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AFR_RS14435 PF07690 Major Facilitator Superfamily AFR_RS14440 PF01547 Bacterial extracellular solute-binding protein AFR_RS14445 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14475 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS14475 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14480 PF01370 NAD dependent epimerase/dehydratase family AFR_RS14485 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14510 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS14510 PF01799 [2Fe-2S] binding domain AFR_RS14520 PF00232 Glycosyl hydrolase family 1 AFR_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS14550 PF03466 LysR substrate binding domain AFR_RS14560 PF08281 Sigma-70, region 4 AFR_RS14560 PF12680 SnoaL-like domain AFR_RS14560 PF04542 Sigma-70 region 2 AFR_RS14600 PF00107 Zinc-binding dehydrogenase AFR_RS14600 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14600 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS14625 PF00313 'Cold-shock' DNA-binding domain AFR_RS14635 PF01965 DJ-1/PfpI family AFR_RS14635 PF12833 Helix-turn-helix domain AFR_RS14640 PF00196 Bacterial regulatory proteins, luxR family AFR_RS14655 PF12697 Alpha/beta hydrolase family AFR_RS14660 PF02525 Flavodoxin-like fold AFR_RS14670 PF02311 AraC-like ligand binding domain AFR_RS14670 PF12833 Helix-turn-helix domain AFR_RS14675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS14675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS14680 PF00005 ABC transporter AFR_RS14680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS14685 PF00005 ABC transporter AFR_RS14685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS14690 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS14705 PF00501 AMP-binding enzyme AFR_RS14720 PF02417 Chromate transporter AFR_RS14735 PF00942 Cellulose binding domain AFR_RS14735 PF00759 Glycosyl hydrolase family 9 AFR_RS14735 PF00404 Dockerin type I domain AFR_RS14755 PF01494 FAD binding domain AFR_RS14770 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14775 PF06441 Epoxide hydrolase N terminus AFR_RS14795 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14800 PF00394 Multicopper oxidase AFR_RS14800 PF07731 Multicopper oxidase AFR_RS14800 PF07732 Multicopper oxidase AFR_RS14805 PF08659 KR domain AFR_RS14805 PF00550 Phosphopantetheine attachment site AFR_RS14805 PF14765 Polyketide synthase dehydratase AFR_RS14805 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS14805 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS14805 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS14805 PF08990 Erythronolide synthase docking AFR_RS14805 PF00698 Acyl transferase domain AFR_RS14805 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS14850 PF01022 Bacterial regulatory protein, arsR family AFR_RS14855 PF00457 Glycosyl hydrolases family 11 AFR_RS14860 PF03664 Glycosyl hydrolase family 62 AFR_RS14860 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS14865 PF01547 Bacterial extracellular solute-binding protein AFR_RS14870 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS14880 PF03176 MMPL family AFR_RS14895 PF07730 Histidine kinase AFR_RS14895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS14900 PF00196 Bacterial regulatory proteins, luxR family AFR_RS14900 PF00072 Response regulator receiver domain AFR_RS14905 PF01752 Collagenase AFR_RS14905 PF08453 Peptidase family M9 N-terminal AFR_RS14910 PF00440 Bacterial regulatory proteins, tetR family AFR_RS14910 PF17754 MftR C-terminal domain AFR_RS14925 PF00400 WD domain, G-beta repeat AFR_RS14925 PF00069 Protein kinase domain AFR_RS14930 PF14765 Polyketide synthase dehydratase AFR_RS14930 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS14930 PF08659 KR domain AFR_RS14930 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS14930 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS14930 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS14930 PF09277 Erythronolide synthase, docking AFR_RS14930 PF00698 Acyl transferase domain AFR_RS14930 PF08990 Erythronolide synthase docking AFR_RS14930 PF00550 Phosphopantetheine attachment site AFR_RS14945 PF12697 Alpha/beta hydrolase family AFR_RS14950 PF00486 Transcriptional regulatory protein, C terminal AFR_RS14950 PF03704 Bacterial transcriptional activator domain AFR_RS14965 PF07859 alpha/beta hydrolase fold AFR_RS14980 PF02011 Glycosyl hydrolase family 48 AFR_RS14980 PF00041 Fibronectin type III domain AFR_RS14980 PF00553 Cellulose binding domain AFR_RS14985 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS14985 PF03664 Glycosyl hydrolase family 62 AFR_RS14990 PF00553 Cellulose binding domain AFR_RS14990 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS14995 PF00331 Glycosyl hydrolase family 10 AFR_RS14995 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS15020 PF00069 Protein kinase domain AFR_RS15025 PF00480 ROK family AFR_RS15040 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS15045 PF14785 Maltose transport system permease protein MalF P2 domain AFR_RS15045 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS15060 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AFR_RS15060 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AFR_RS15110 PF06441 Epoxide hydrolase N terminus AFR_RS15130 PF00672 HAMP domain AFR_RS15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS15130 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS15135 PF00072 Response regulator receiver domain AFR_RS15135 PF00486 Transcriptional regulatory protein, C terminal AFR_RS15140 PF00005 ABC transporter AFR_RS15170 PF08281 Sigma-70, region 4 AFR_RS15170 PF04542 Sigma-70 region 2 AFR_RS15180 PF01156 Inosine-uridine preferring nucleoside hydrolase AFR_RS15190 PF00248 Aldo/keto reductase family AFR_RS15195 PF00107 Zinc-binding dehydrogenase AFR_RS15195 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS15205 PF01638 HxlR-like helix-turn-helix AFR_RS15210 PF00440 Bacterial regulatory proteins, tetR family AFR_RS15210 PF17754 MftR C-terminal domain AFR_RS15215 PF00005 ABC transporter AFR_RS15230 PF03466 LysR substrate binding domain AFR_RS15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS15250 PF05661 Protein of unknown function (DUF808) AFR_RS15260 PF01161 Phosphatidylethanolamine-binding protein AFR_RS15290 PF04185 Phosphoesterase family AFR_RS15290 PF05506 Domain of unknown function (DUF756) AFR_RS15310 PF06772 Bacterial low temperature requirement A protein (LtrA) AFR_RS15320 PF07859 alpha/beta hydrolase fold AFR_RS15330 PF12833 Helix-turn-helix domain AFR_RS15330 PF06719 AraC-type transcriptional regulator N-terminus AFR_RS15350 PF01475 Ferric uptake regulator family AFR_RS15355 PF00141 Peroxidase AFR_RS15360 PF00561 alpha/beta hydrolase fold AFR_RS15365 PF01638 HxlR-like helix-turn-helix AFR_RS15375 PF02156 Glycosyl hydrolase family 26 AFR_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS15400 PF00356 Bacterial regulatory proteins, lacI family AFR_RS15405 PF00480 ROK family AFR_RS15405 PF01047 MarR family AFR_RS15430 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS15430 PF00107 Zinc-binding dehydrogenase AFR_RS15435 PF13086 AAA domain AFR_RS15435 PF13087 AAA domain AFR_RS15435 PF13195 Protein of unknown function (DUF4011) AFR_RS15440 PF00905 Penicillin binding protein transpeptidase domain AFR_RS15440 PF00912 Transglycosylase AFR_RS15455 PF05977 Transmembrane secretion effector AFR_RS15460 PF00005 ABC transporter AFR_RS15475 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS15475 PF00563 EAL domain AFR_RS15475 PF03707 Bacterial signalling protein N terminal repeat AFR_RS15485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFR_RS15485 PF18029 Glyoxalase-like domain AFR_RS15500 PF13026 Protein of unknown function (DUF3887) AFR_RS15500 PF12146 Serine aminopeptidase, S33 AFR_RS15510 PF00672 HAMP domain AFR_RS15510 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS15515 PF00486 Transcriptional regulatory protein, C terminal AFR_RS15515 PF00072 Response regulator receiver domain AFR_RS15535 PF00106 short chain dehydrogenase AFR_RS15555 PF00440 Bacterial regulatory proteins, tetR family AFR_RS15565 PF00657 GDSL-like Lipase/Acylhydrolase AFR_RS15565 PF00404 Dockerin type I domain AFR_RS15575 PF17678 Glycosyl hydrolase family 92 N-terminal domain AFR_RS15575 PF07971 Glycosyl hydrolase family 92 AFR_RS15595 PF00296 Luciferase-like monooxygenase AFR_RS15610 PF00501 AMP-binding enzyme AFR_RS15610 PF13193 AMP-binding enzyme C-terminal domain AFR_RS15610 PF00550 Phosphopantetheine attachment site AFR_RS15610 PF07993 Male sterility protein AFR_RS15610 PF00668 Condensation domain AFR_RS15615 PF01433 Peptidase family M1 domain AFR_RS15615 PF11838 ERAP1-like C-terminal domain AFR_RS15635 PF00561 alpha/beta hydrolase fold AFR_RS15675 PF04616 Glycosyl hydrolases family 43 AFR_RS15675 PF03422 Carbohydrate binding module (family 6) AFR_RS15685 PF06445 GyrI-like small molecule binding domain AFR_RS15685 PF12833 Helix-turn-helix domain AFR_RS15690 PF00106 short chain dehydrogenase AFR_RS15695 PF17754 MftR C-terminal domain AFR_RS15695 PF00440 Bacterial regulatory proteins, tetR family AFR_RS15740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFR_RS15740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS15750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFR_RS15750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS15765 PF08402 TOBE domain AFR_RS15765 PF00005 ABC transporter AFR_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS15790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS15790 PF00205 Thiamine pyrophosphate enzyme, central domain AFR_RS15790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFR_RS15795 PF02627 Carboxymuconolactone decarboxylase family AFR_RS15800 PF00392 Bacterial regulatory proteins, gntR family AFR_RS15800 PF07840 FadR C-terminal domain AFR_RS15805 PF03328 HpcH/HpaI aldolase/citrate lyase family AFR_RS15815 PF00743 Flavin-binding monooxygenase-like AFR_RS15820 PF00753 Metallo-beta-lactamase superfamily AFR_RS15840 PF00171 Aldehyde dehydrogenase family AFR_RS15850 PF07690 Major Facilitator Superfamily AFR_RS15860 PF03466 LysR substrate binding domain AFR_RS15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS15875 PF13649 Methyltransferase domain AFR_RS15880 PF00544 Pectate lyase AFR_RS15885 PF00561 alpha/beta hydrolase fold AFR_RS15890 PF04231 Endonuclease I AFR_RS15895 PF00491 Arginase family AFR_RS15925 PF00308 Bacterial dnaA protein AFR_RS15925 PF08299 Bacterial dnaA protein helix-turn-helix AFR_RS15925 PF11638 DnaA N-terminal domain AFR_RS15930 PF00248 Aldo/keto reductase family AFR_RS15935 PF17925 Tetracyclin repressor-like, C-terminal domain AFR_RS15935 PF00440 Bacterial regulatory proteins, tetR family AFR_RS15940 PF03401 Tripartite tricarboxylate transporter family receptor AFR_RS15950 PF01970 Tripartite tricarboxylate transporter TctA family AFR_RS15960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AFR_RS15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS15960 PF00989 PAS fold AFR_RS15960 PF17203 Single cache domain 3 AFR_RS15965 PF04703 FaeA-like protein AFR_RS15965 PF00072 Response regulator receiver domain AFR_RS15970 PF00486 Transcriptional regulatory protein, C terminal AFR_RS15970 PF00931 NB-ARC domain AFR_RS15970 PF03704 Bacterial transcriptional activator domain AFR_RS15975 PF00132 Bacterial transferase hexapeptide (six repeats) AFR_RS15980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS15980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS15985 PF01370 NAD dependent epimerase/dehydratase family AFR_RS15990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFR_RS16000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFR_RS16025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFR_RS16025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFR_RS16030 PF00501 AMP-binding enzyme AFR_RS16030 PF13193 AMP-binding enzyme C-terminal domain AFR_RS16060 PF00535 Glycosyl transferase family 2 AFR_RS16080 PF00534 Glycosyl transferases group 1 AFR_RS16080 PF13439 Glycosyltransferase Family 4 AFR_RS16100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS16100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS16100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS16105 PF02397 Bacterial sugar transferase AFR_RS16110 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AFR_RS16115 PF00483 Nucleotidyl transferase AFR_RS16120 PF16363 GDP-mannose 4,6 dehydratase AFR_RS16125 PF04321 RmlD substrate binding domain AFR_RS16130 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS16130 PF00107 Zinc-binding dehydrogenase AFR_RS16150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFR_RS16150 PF01261 Xylose isomerase-like TIM barrel AFR_RS16155 PF00440 Bacterial regulatory proteins, tetR family AFR_RS16155 PF17938 Tetracyclin repressor-like, C-terminal domain AFR_RS16160 PF08501 Shikimate dehydrogenase substrate binding domain AFR_RS16160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AFR_RS16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS16175 PF03466 LysR substrate binding domain AFR_RS16205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AFR_RS16205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AFR_RS16210 PF01037 Lrp/AsnC ligand binding domain AFR_RS16225 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS16235 PF00196 Bacterial regulatory proteins, luxR family AFR_RS16235 PF00072 Response regulator receiver domain AFR_RS16240 PF07730 Histidine kinase AFR_RS16245 PF03176 MMPL family AFR_RS16255 PF03009 Glycerophosphoryl diester phosphodiesterase family AFR_RS16270 PF00069 Protein kinase domain AFR_RS16270 PF03793 PASTA domain AFR_RS16295 PF00248 Aldo/keto reductase family AFR_RS16305 PF13407 Periplasmic binding protein domain AFR_RS16310 PF00005 ABC transporter AFR_RS16315 PF02653 Branched-chain amino acid transport system / permease component AFR_RS16320 PF00480 ROK family AFR_RS16345 PF00196 Bacterial regulatory proteins, luxR family AFR_RS16345 PF00072 Response regulator receiver domain AFR_RS16355 PF01494 FAD binding domain AFR_RS16365 PF03781 Sulfatase-modifying factor enzyme 1 AFR_RS16380 PF05762 VWA domain containing CoxE-like protein AFR_RS16385 PF07728 AAA domain (dynein-related subfamily) AFR_RS16430 PF00905 Penicillin binding protein transpeptidase domain AFR_RS16430 PF03717 Penicillin-binding Protein dimerisation domain AFR_RS16430 PF03793 PASTA domain AFR_RS16435 PF00753 Metallo-beta-lactamase superfamily AFR_RS16435 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFR_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS16440 PF03466 LysR substrate binding domain AFR_RS16445 PF00106 short chain dehydrogenase AFR_RS16450 PF00404 Dockerin type I domain AFR_RS16450 PF00657 GDSL-like Lipase/Acylhydrolase AFR_RS16455 PF01040 UbiA prenyltransferase family AFR_RS16460 PF02733 Dak1 domain AFR_RS16465 PF02734 DAK2 domain AFR_RS16470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFR_RS16470 PF05524 PEP-utilising enzyme, N-terminal AFR_RS16470 PF02896 PEP-utilising enzyme, TIM barrel domain AFR_RS16470 PF00391 PEP-utilising enzyme, mobile domain AFR_RS16470 PF00381 PTS HPr component phosphorylation site AFR_RS16525 PF00293 NUDIX domain AFR_RS16525 PF13344 Haloacid dehalogenase-like hydrolase AFR_RS16530 PF04616 Glycosyl hydrolases family 43 AFR_RS16530 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AFR_RS16545 PF13520 Amino acid permease AFR_RS16560 PF17932 Tetracyclin repressor-like, C-terminal domain AFR_RS16560 PF00440 Bacterial regulatory proteins, tetR family AFR_RS16565 PF07690 Major Facilitator Superfamily AFR_RS16590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS16590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS16590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS16600 PF01757 Acyltransferase family AFR_RS16605 PF00535 Glycosyl transferase family 2 AFR_RS16605 PF03552 Cellulose synthase AFR_RS16605 PF07238 PilZ domain AFR_RS16625 PF00221 Aromatic amino acid lyase AFR_RS16655 PF00106 short chain dehydrogenase AFR_RS16660 PF00294 pfkB family carbohydrate kinase AFR_RS16660 PF01467 Cytidylyltransferase-like AFR_RS16665 PF13580 SIS domain AFR_RS16670 PF00534 Glycosyl transferases group 1 AFR_RS16670 PF13439 Glycosyltransferase Family 4 AFR_RS16690 PF02543 Carbamoyltransferase N-terminus AFR_RS16690 PF16861 Carbamoyltransferase C-terminus AFR_RS16695 PF00171 Aldehyde dehydrogenase family AFR_RS16710 PF04542 Sigma-70 region 2 AFR_RS16710 PF04539 Sigma-70 region 3 AFR_RS16710 PF04545 Sigma-70, region 4 AFR_RS16720 PF00005 ABC transporter AFR_RS16725 PF01497 Periplasmic binding protein AFR_RS16730 PF01032 FecCD transport family AFR_RS16800 PF00285 Citrate synthase, C-terminal domain AFR_RS16805 PF00285 Citrate synthase, C-terminal domain AFR_RS16815 PF00067 Cytochrome P450 AFR_RS16825 PF01594 AI-2E family transporter AFR_RS16850 PF00391 PEP-utilising enzyme, mobile domain AFR_RS16850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFR_RS16860 PF12704 MacB-like periplasmic core domain AFR_RS16860 PF02687 FtsX-like permease family AFR_RS16865 PF12704 MacB-like periplasmic core domain AFR_RS16865 PF00005 ABC transporter AFR_RS16865 PF02687 FtsX-like permease family AFR_RS16890 PF04542 Sigma-70 region 2 AFR_RS16890 PF08281 Sigma-70, region 4 AFR_RS16895 PF03009 Glycerophosphoryl diester phosphodiesterase family AFR_RS16910 PF02547 Queuosine biosynthesis protein AFR_RS16920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS16920 PF07730 Histidine kinase AFR_RS16920 PF00672 HAMP domain AFR_RS16925 PF00072 Response regulator receiver domain AFR_RS16925 PF00196 Bacterial regulatory proteins, luxR family AFR_RS16935 PF01554 MatE AFR_RS16945 PF05103 DivIVA protein AFR_RS16950 PF00356 Bacterial regulatory proteins, lacI family AFR_RS16965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS16965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS16975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS16975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS16995 PF02614 Glucuronate isomerase AFR_RS17000 PF01232 Mannitol dehydrogenase Rossmann domain AFR_RS17000 PF08125 Mannitol dehydrogenase C-terminal domain AFR_RS17045 PF00171 Aldehyde dehydrogenase family AFR_RS17050 PF01037 Lrp/AsnC ligand binding domain AFR_RS17055 PF00676 Dehydrogenase E1 component AFR_RS17060 PF02780 Transketolase, C-terminal domain AFR_RS17060 PF02779 Transketolase, pyrimidine binding domain AFR_RS17065 PF00364 Biotin-requiring enzyme AFR_RS17065 PF02817 e3 binding domain AFR_RS17065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFR_RS17070 PF07690 Major Facilitator Superfamily AFR_RS17080 PF00356 Bacterial regulatory proteins, lacI family AFR_RS17095 PF00072 Response regulator receiver domain AFR_RS17095 PF00486 Transcriptional regulatory protein, C terminal AFR_RS17100 PF05922 Peptidase inhibitor I9 AFR_RS17100 PF00082 Subtilase family AFR_RS17115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS17115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS17130 PF13188 PAS domain AFR_RS17130 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17130 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17130 PF00563 EAL domain AFR_RS17135 PF00155 Aminotransferase class I and II AFR_RS17150 PF00069 Protein kinase domain AFR_RS17150 PF03793 PASTA domain AFR_RS17175 PF08281 Sigma-70, region 4 AFR_RS17175 PF04542 Sigma-70 region 2 AFR_RS17180 PF00781 Diacylglycerol kinase catalytic domain AFR_RS17190 PF01494 FAD binding domain AFR_RS17210 PF01872 RibD C-terminal domain AFR_RS17220 PF00563 EAL domain AFR_RS17220 PF13188 PAS domain AFR_RS17220 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17220 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17225 PF00155 Aminotransferase class I and II AFR_RS17230 PF07690 Major Facilitator Superfamily AFR_RS17240 PF17801 Alpha galactosidase C-terminal beta sandwich domain AFR_RS17240 PF16499 Alpha galactosidase A AFR_RS17250 PF09335 SNARE associated Golgi protein AFR_RS17255 PF00106 short chain dehydrogenase AFR_RS17265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS17285 PF13407 Periplasmic binding protein domain AFR_RS17290 PF02653 Branched-chain amino acid transport system / permease component AFR_RS17295 PF00005 ABC transporter AFR_RS17320 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17320 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17320 PF00563 EAL domain AFR_RS17330 PF06271 RDD family AFR_RS17340 PF01594 AI-2E family transporter AFR_RS17345 PF13443 Cro/C1-type HTH DNA-binding domain AFR_RS17355 PF03358 NADPH-dependent FMN reductase AFR_RS17360 PF00072 Response regulator receiver domain AFR_RS17395 PF03069 Acetamidase/Formamidase family AFR_RS17425 PF00561 alpha/beta hydrolase fold AFR_RS17430 PF00196 Bacterial regulatory proteins, luxR family AFR_RS17445 PF12833 Helix-turn-helix domain AFR_RS17445 PF12852 Cupin AFR_RS17455 PF12704 MacB-like periplasmic core domain AFR_RS17455 PF02687 FtsX-like permease family AFR_RS17455 PF00005 ABC transporter AFR_RS17470 PF00486 Transcriptional regulatory protein, C terminal AFR_RS17470 PF00072 Response regulator receiver domain AFR_RS17475 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS17475 PF00672 HAMP domain AFR_RS17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS17480 PF00563 EAL domain AFR_RS17480 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17480 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17480 PF13188 PAS domain AFR_RS17490 PF00535 Glycosyl transferase family 2 AFR_RS17495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS17495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS17500 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS17500 PF00107 Zinc-binding dehydrogenase AFR_RS17505 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17515 PF13188 PAS domain AFR_RS17515 PF00563 EAL domain AFR_RS17515 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17515 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17540 PF00082 Subtilase family AFR_RS17590 PF01965 DJ-1/PfpI family AFR_RS17595 PF01965 DJ-1/PfpI family AFR_RS17620 PF12852 Cupin AFR_RS17620 PF12833 Helix-turn-helix domain AFR_RS17625 PF00106 short chain dehydrogenase AFR_RS17655 PF04542 Sigma-70 region 2 AFR_RS17655 PF04539 Sigma-70 region 3 AFR_RS17655 PF04545 Sigma-70, region 4 AFR_RS17665 PF00356 Bacterial regulatory proteins, lacI family AFR_RS17670 PF00069 Protein kinase domain AFR_RS17685 PF13472 GDSL-like Lipase/Acylhydrolase family AFR_RS17690 PF00561 alpha/beta hydrolase fold AFR_RS17705 PF01095 Pectinesterase AFR_RS17710 PF00682 HMGL-like AFR_RS17715 PF00392 Bacterial regulatory proteins, gntR family AFR_RS17715 PF07729 FCD domain AFR_RS17720 PF02515 CoA-transferase family III AFR_RS17725 PF01968 Hydantoinase/oxoprolinase AFR_RS17725 PF05378 Hydantoinase/oxoprolinase N-terminal region AFR_RS17730 PF02538 Hydantoinase B/oxoprolinase AFR_RS17735 PF00857 Isochorismatase family AFR_RS17740 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS17740 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS17740 PF14310 Fibronectin type III-like domain AFR_RS17745 PF00480 ROK family AFR_RS17755 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS17760 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS17770 PF08533 Beta-galactosidase C-terminal domain AFR_RS17770 PF02449 Beta-galactosidase AFR_RS17770 PF08532 Beta-galactosidase trimerisation domain AFR_RS17785 PF06452 Carbohydrate family 9 binding domain-like AFR_RS17785 PF02018 Carbohydrate binding domain AFR_RS17785 PF00331 Glycosyl hydrolase family 10 AFR_RS17790 PF00196 Bacterial regulatory proteins, luxR family AFR_RS17790 PF00072 Response regulator receiver domain AFR_RS17795 PF07730 Histidine kinase AFR_RS17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS17815 PF01367 5'-3' exonuclease, C-terminal SAM fold AFR_RS17815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFR_RS17815 PF00476 DNA polymerase family A AFR_RS17830 PF00202 Aminotransferase class-III AFR_RS17840 PF03576 Peptidase family S58 AFR_RS17860 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS17860 PF00331 Glycosyl hydrolase family 10 AFR_RS17865 PF01522 Polysaccharide deacetylase AFR_RS17865 PF00457 Glycosyl hydrolases family 11 AFR_RS17870 PF07969 Amidohydrolase family AFR_RS17895 PF00072 Response regulator receiver domain AFR_RS17900 PF02016 LD-carboxypeptidase N-terminal domain AFR_RS17900 PF17676 LD-carboxypeptidase C-terminal domain AFR_RS17930 PF00403 Heavy-metal-associated domain AFR_RS17930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS17930 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS17950 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS17950 PF00563 EAL domain AFR_RS17950 PF03707 Bacterial signalling protein N terminal repeat AFR_RS17960 PF07859 alpha/beta hydrolase fold AFR_RS17990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFR_RS18000 PF01209 ubiE/COQ5 methyltransferase family AFR_RS18010 PF03466 LysR substrate binding domain AFR_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS18015 PF04616 Glycosyl hydrolases family 43 AFR_RS18015 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AFR_RS18020 PF04616 Glycosyl hydrolases family 43 AFR_RS18025 PF00544 Pectate lyase AFR_RS18030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AFR_RS18030 PF18416 N-acetylglucosamine binding protein domain 2 AFR_RS18055 PF00534 Glycosyl transferases group 1 AFR_RS18055 PF13439 Glycosyltransferase Family 4 AFR_RS18065 PF02913 FAD linked oxidases, C-terminal domain AFR_RS18065 PF01565 FAD binding domain AFR_RS18065 PF13183 4Fe-4S dicluster domain AFR_RS18070 PF01638 HxlR-like helix-turn-helix AFR_RS18075 PF02525 Flavodoxin-like fold AFR_RS18085 PF00296 Luciferase-like monooxygenase AFR_RS18100 PF09318 Glycosyl transferase 1 domain A AFR_RS18100 PF00534 Glycosyl transferases group 1 AFR_RS18105 PF17101 Stealth protein CR1, conserved region 1 AFR_RS18105 PF11380 Stealth protein CR2, conserved region 2 AFR_RS18105 PF17103 Stealth protein CR4, conserved region 4 AFR_RS18105 PF17102 Stealth protein CR3, conserved region 3 AFR_RS18110 PF17102 Stealth protein CR3, conserved region 3 AFR_RS18110 PF11380 Stealth protein CR2, conserved region 2 AFR_RS18110 PF17101 Stealth protein CR1, conserved region 1 AFR_RS18110 PF17103 Stealth protein CR4, conserved region 4 AFR_RS18125 PF14310 Fibronectin type III-like domain AFR_RS18125 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS18125 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS18135 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS18140 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS18145 PF00356 Bacterial regulatory proteins, lacI family AFR_RS18150 PF00331 Glycosyl hydrolase family 10 AFR_RS18150 PF00553 Cellulose binding domain AFR_RS18175 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS18175 PF00331 Glycosyl hydrolase family 10 AFR_RS18180 PF10503 Esterase PHB depolymerase AFR_RS18190 PF00533 BRCA1 C Terminus (BRCT) domain AFR_RS18190 PF12826 Helix-hairpin-helix motif AFR_RS18190 PF03120 NAD-dependent DNA ligase OB-fold domain AFR_RS18190 PF01653 NAD-dependent DNA ligase adenylation domain AFR_RS18195 PF01872 RibD C-terminal domain AFR_RS18205 PF12849 PBP superfamily domain AFR_RS18210 PF00248 Aldo/keto reductase family AFR_RS18215 PF13977 BetI-type transcriptional repressor, C-terminal AFR_RS18215 PF00440 Bacterial regulatory proteins, tetR family AFR_RS18225 PF13732 Domain of unknown function (DUF4162) AFR_RS18225 PF00005 ABC transporter AFR_RS18235 PF05576 PS-10 peptidase S37 AFR_RS18245 PF00248 Aldo/keto reductase family AFR_RS18255 PF00400 WD domain, G-beta repeat AFR_RS18255 PF00069 Protein kinase domain AFR_RS18285 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS18285 PF13188 PAS domain AFR_RS18285 PF00563 EAL domain AFR_RS18285 PF03707 Bacterial signalling protein N terminal repeat AFR_RS18290 PF00561 alpha/beta hydrolase fold AFR_RS18315 PF01593 Flavin containing amine oxidoreductase AFR_RS18330 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AFR_RS18330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AFR_RS18335 PF00144 Beta-lactamase AFR_RS18355 PF00672 HAMP domain AFR_RS18355 PF12729 Four helix bundle sensory module for signal transduction AFR_RS18355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS18360 PF17912 MalK OB fold domain AFR_RS18360 PF00005 ABC transporter AFR_RS18365 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS18370 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS18395 PF03435 Saccharopine dehydrogenase NADP binding domain AFR_RS18400 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS18425 PF00356 Bacterial regulatory proteins, lacI family AFR_RS18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS18430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS18450 PF00356 Bacterial regulatory proteins, lacI family AFR_RS18455 PF13458 Periplasmic binding protein AFR_RS18465 PF02653 Branched-chain amino acid transport system / permease component AFR_RS18470 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFR_RS18470 PF00005 ABC transporter AFR_RS18475 PF00005 ABC transporter AFR_RS18520 PF00664 ABC transporter transmembrane region AFR_RS18520 PF00005 ABC transporter AFR_RS18525 PF00664 ABC transporter transmembrane region AFR_RS18525 PF00005 ABC transporter AFR_RS18530 PF00491 Arginase family AFR_RS18560 PF16874 Glycosyl hydrolase family 36 C-terminal domain AFR_RS18560 PF16875 Glycosyl hydrolase family 36 N-terminal domain AFR_RS18570 PF00355 Rieske [2Fe-2S] domain AFR_RS18570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AFR_RS18575 PF01266 FAD dependent oxidoreductase AFR_RS18580 PF01266 FAD dependent oxidoreductase AFR_RS18580 PF01571 Aminomethyltransferase folate-binding domain AFR_RS18580 PF16350 FAD dependent oxidoreductase central domain AFR_RS18580 PF08669 Glycine cleavage T-protein C-terminal barrel domain AFR_RS18590 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS18595 PF00571 CBS domain AFR_RS18595 PF00005 ABC transporter AFR_RS18600 PF00732 GMC oxidoreductase AFR_RS18600 PF05199 GMC oxidoreductase AFR_RS18605 PF09335 SNARE associated Golgi protein AFR_RS18615 PF00005 ABC transporter AFR_RS18625 PF02655 ATP-grasp domain AFR_RS18625 PF00206 Lyase AFR_RS18630 PF02655 ATP-grasp domain AFR_RS18630 PF00206 Lyase AFR_RS18635 PF00501 AMP-binding enzyme AFR_RS18635 PF13193 AMP-binding enzyme C-terminal domain AFR_RS18635 PF00668 Condensation domain AFR_RS18635 PF00550 Phosphopantetheine attachment site AFR_RS18640 PF00288 GHMP kinases N terminal domain AFR_RS18665 PF00501 AMP-binding enzyme AFR_RS18670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS18670 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS18670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS18685 PF00550 Phosphopantetheine attachment site AFR_RS18685 PF00975 Thioesterase domain AFR_RS18685 PF00668 Condensation domain AFR_RS18685 PF13193 AMP-binding enzyme C-terminal domain AFR_RS18685 PF00501 AMP-binding enzyme AFR_RS18690 PF00550 Phosphopantetheine attachment site AFR_RS18690 PF00668 Condensation domain AFR_RS18690 PF13193 AMP-binding enzyme C-terminal domain AFR_RS18690 PF00501 AMP-binding enzyme AFR_RS18690 PF00975 Thioesterase domain AFR_RS18695 PF13193 AMP-binding enzyme C-terminal domain AFR_RS18695 PF00975 Thioesterase domain AFR_RS18695 PF00550 Phosphopantetheine attachment site AFR_RS18695 PF00668 Condensation domain AFR_RS18695 PF00501 AMP-binding enzyme AFR_RS18700 PF03621 MbtH-like protein AFR_RS18705 PF12697 Alpha/beta hydrolase family AFR_RS18710 PF03176 MMPL family AFR_RS18715 PF02423 Ornithine cyclodeaminase/mu-crystallin family AFR_RS18720 PF00196 Bacterial regulatory proteins, luxR family AFR_RS18720 PF00072 Response regulator receiver domain AFR_RS18725 PF07730 Histidine kinase AFR_RS18735 PF07690 Major Facilitator Superfamily AFR_RS18740 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS18740 PF00440 Bacterial regulatory proteins, tetR family AFR_RS18745 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS18755 PF07690 Major Facilitator Superfamily AFR_RS18765 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS18775 PF00011 Hsp20/alpha crystallin family AFR_RS18785 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS18795 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFR_RS18820 PF01568 Molydopterin dinucleotide binding domain AFR_RS18820 PF00384 Molybdopterin oxidoreductase AFR_RS18820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFR_RS18830 PF18267 Rubredoxin NAD+ reductase C-terminal domain AFR_RS18830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFR_RS18830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFR_RS18830 PF04324 BFD-like [2Fe-2S] binding domain AFR_RS18830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS18835 PF00355 Rieske [2Fe-2S] domain AFR_RS18840 PF07690 Major Facilitator Superfamily AFR_RS18865 PF00561 alpha/beta hydrolase fold AFR_RS18870 PF00106 short chain dehydrogenase AFR_RS18875 PF00743 Flavin-binding monooxygenase-like AFR_RS18880 PF12833 Helix-turn-helix domain AFR_RS18880 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AFR_RS18900 PF08713 DNA alkylation repair enzyme AFR_RS18905 PF01323 DSBA-like thioredoxin domain AFR_RS18940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS18940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFR_RS18955 PF01297 Zinc-uptake complex component A periplasmic AFR_RS18960 PF00005 ABC transporter AFR_RS18980 PF11606 Family 31 carbohydrate binding protein AFR_RS19000 PF00400 WD domain, G-beta repeat AFR_RS19000 PF00069 Protein kinase domain AFR_RS19015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFR_RS19015 PF13378 Enolase C-terminal domain-like AFR_RS19020 PF06737 Transglycosylase-like domain AFR_RS19035 PF02449 Beta-galactosidase AFR_RS19035 PF08533 Beta-galactosidase C-terminal domain AFR_RS19035 PF08532 Beta-galactosidase trimerisation domain AFR_RS19040 PF00149 Calcineurin-like phosphoesterase AFR_RS19065 PF00072 Response regulator receiver domain AFR_RS19065 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS19070 PF02013 Cellulose or protein binding domain AFR_RS19070 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS19075 PF03442 Carbohydrate binding domain X2 AFR_RS19075 PF00942 Cellulose binding domain AFR_RS19080 PF00041 Fibronectin type III domain AFR_RS19080 PF00553 Cellulose binding domain AFR_RS19080 PF02011 Glycosyl hydrolase family 48 AFR_RS19085 PF00553 Cellulose binding domain AFR_RS19085 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AFR_RS19090 PF00356 Bacterial regulatory proteins, lacI family AFR_RS19095 PF13407 Periplasmic binding protein domain AFR_RS19100 PF00005 ABC transporter AFR_RS19105 PF02653 Branched-chain amino acid transport system / permease component AFR_RS19110 PF02653 Branched-chain amino acid transport system / permease component AFR_RS19125 PF00296 Luciferase-like monooxygenase AFR_RS19135 PF07690 Major Facilitator Superfamily AFR_RS19140 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS19140 PF00440 Bacterial regulatory proteins, tetR family AFR_RS19145 PF04978 Protein of unknown function (DUF664) AFR_RS19150 PF01197 Ribosomal protein L31 AFR_RS19155 PF07683 Cobalamin synthesis protein cobW C-terminal domain AFR_RS19155 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFR_RS19160 PF13203 Putative metallopeptidase domain AFR_RS19160 PF09967 VWA-like domain (DUF2201) AFR_RS19190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFR_RS19190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFR_RS19195 PF00941 FAD binding domain in molybdopterin dehydrogenase AFR_RS19195 PF03450 CO dehydrogenase flavoprotein C-terminal domain AFR_RS19200 PF01799 [2Fe-2S] binding domain AFR_RS19200 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS19250 PF00149 Calcineurin-like phosphoesterase AFR_RS19255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFR_RS19255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFR_RS19265 PF01965 DJ-1/PfpI family AFR_RS19275 PF00149 Calcineurin-like phosphoesterase AFR_RS19295 PF00563 EAL domain AFR_RS19295 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS19295 PF08447 PAS fold AFR_RS19295 PF08448 PAS fold AFR_RS19300 PF01795 MraW methylase family AFR_RS19310 PF00296 Luciferase-like monooxygenase AFR_RS19315 PF12833 Helix-turn-helix domain AFR_RS19315 PF06719 AraC-type transcriptional regulator N-terminus AFR_RS19320 PF00248 Aldo/keto reductase family AFR_RS19340 PF13188 PAS domain AFR_RS19340 PF03707 Bacterial signalling protein N terminal repeat AFR_RS19340 PF00563 EAL domain AFR_RS19340 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS19355 PF00962 Adenosine/AMP deaminase AFR_RS19360 PF01313 Bacterial export proteins, family 3 AFR_RS19380 PF00392 Bacterial regulatory proteins, gntR family AFR_RS19380 PF00155 Aminotransferase class I and II AFR_RS19405 PF00672 HAMP domain AFR_RS19405 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS19410 PF00072 Response regulator receiver domain AFR_RS19410 PF00486 Transcriptional regulatory protein, C terminal AFR_RS19425 PF00563 EAL domain AFR_RS19425 PF03707 Bacterial signalling protein N terminal repeat AFR_RS19425 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS19430 PF09339 IclR helix-turn-helix domain AFR_RS19430 PF01614 Bacterial transcriptional regulator AFR_RS19435 PF02627 Carboxymuconolactone decarboxylase family AFR_RS19440 PF00561 alpha/beta hydrolase fold AFR_RS19445 PF00206 Lyase AFR_RS19445 PF10397 Adenylosuccinate lyase C-terminus AFR_RS19455 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AFR_RS19455 PF00775 Dioxygenase AFR_RS19460 PF01144 Coenzyme A transferase AFR_RS19465 PF01144 Coenzyme A transferase AFR_RS19470 PF01494 FAD binding domain AFR_RS19480 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19485 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19490 PF00005 ABC transporter AFR_RS19495 PF00171 Aldehyde dehydrogenase family AFR_RS19500 PF00561 alpha/beta hydrolase fold AFR_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19515 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19520 PF01547 Bacterial extracellular solute-binding protein AFR_RS19525 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AFR_RS19525 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AFR_RS19525 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AFR_RS19525 PF08531 Alpha-L-rhamnosidase N-terminal domain AFR_RS19550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS19550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS19555 PF02806 Alpha amylase, C-terminal all-beta domain AFR_RS19555 PF00686 Starch binding domain AFR_RS19555 PF00128 Alpha amylase, catalytic domain AFR_RS19560 PF00356 Bacterial regulatory proteins, lacI family AFR_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19570 PF14785 Maltose transport system permease protein MalF P2 domain AFR_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS19580 PF00107 Zinc-binding dehydrogenase AFR_RS19580 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS19595 PF00440 Bacterial regulatory proteins, tetR family AFR_RS19595 PF13977 BetI-type transcriptional repressor, C-terminal AFR_RS19605 PF04075 F420H(2)-dependent quinone reductase AFR_RS19610 PF07690 Major Facilitator Superfamily AFR_RS19615 PF01047 MarR family AFR_RS19620 PF00248 Aldo/keto reductase family AFR_RS19625 PF00854 POT family AFR_RS19630 PF06965 Na+/H+ antiporter 1 AFR_RS19630 PF13462 Thioredoxin AFR_RS19635 PF11954 Domain of unknown function (DUF3471) AFR_RS19635 PF00144 Beta-lactamase AFR_RS19645 PF00486 Transcriptional regulatory protein, C terminal AFR_RS19645 PF00072 Response regulator receiver domain AFR_RS19650 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS19650 PF00672 HAMP domain AFR_RS19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS19665 PF01969 Protein of unknown function DUF111 AFR_RS19670 PF00731 AIR carboxylase AFR_RS19675 PF02540 NAD synthase AFR_RS19680 PF00356 Bacterial regulatory proteins, lacI family AFR_RS19695 PF00108 Thiolase, N-terminal domain AFR_RS19695 PF02803 Thiolase, C-terminal domain AFR_RS19700 PF00005 ABC transporter AFR_RS19715 PF01891 Cobalt uptake substrate-specific transmembrane region AFR_RS19715 PF13190 PDGLE domain AFR_RS19740 PF01668 SmpB protein AFR_RS19750 PF00553 Cellulose binding domain AFR_RS19750 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS19755 PF18370 Rhamnogalacturonan I lyases beta-sheet domain AFR_RS19765 PF13977 BetI-type transcriptional repressor, C-terminal AFR_RS19765 PF00440 Bacterial regulatory proteins, tetR family AFR_RS19770 PF02754 Cysteine-rich domain AFR_RS19770 PF13183 4Fe-4S dicluster domain AFR_RS19775 PF02913 FAD linked oxidases, C-terminal domain AFR_RS19775 PF01565 FAD binding domain AFR_RS19780 PF02913 FAD linked oxidases, C-terminal domain AFR_RS19780 PF01565 FAD binding domain AFR_RS19795 PF00107 Zinc-binding dehydrogenase AFR_RS19795 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS19810 PF01483 Proprotein convertase P-domain AFR_RS19810 PF07504 Fungalysin/Thermolysin Propeptide Motif AFR_RS19810 PF02868 Thermolysin metallopeptidase, alpha-helical domain AFR_RS19810 PF01447 Thermolysin metallopeptidase, catalytic domain AFR_RS19815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFR_RS19815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFR_RS19830 PF08281 Sigma-70, region 4 AFR_RS19830 PF04542 Sigma-70 region 2 AFR_RS19835 PF13409 Glutathione S-transferase, N-terminal domain AFR_RS19840 PF08668 HDOD domain AFR_RS19840 PF00563 EAL domain AFR_RS19860 PF00271 Helicase conserved C-terminal domain AFR_RS19860 PF00270 DEAD/DEAH box helicase AFR_RS19860 PF16124 RecQ zinc-binding AFR_RS19860 PF09382 RQC domain AFR_RS19860 PF00570 HRDC domain AFR_RS19865 PF09594 Glycosyltransferase family 87 AFR_RS19875 PF00561 alpha/beta hydrolase fold AFR_RS19880 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS19880 PF13466 STAS domain AFR_RS19880 PF08448 PAS fold AFR_RS19880 PF13581 Histidine kinase-like ATPase domain AFR_RS19885 PF00925 GTP cyclohydrolase II AFR_RS19890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFR_RS19890 PF01872 RibD C-terminal domain AFR_RS19905 PF00534 Glycosyl transferases group 1 AFR_RS19905 PF13439 Glycosyltransferase Family 4 AFR_RS19920 PF01066 CDP-alcohol phosphatidyltransferase AFR_RS19925 PF01497 Periplasmic binding protein AFR_RS19930 PF00561 alpha/beta hydrolase fold AFR_RS19945 PF00860 Permease family AFR_RS19955 PF13411 MerR HTH family regulatory protein AFR_RS19985 PF00970 Oxidoreductase FAD-binding domain AFR_RS19985 PF00175 Oxidoreductase NAD-binding domain AFR_RS19985 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS19990 PF00183 Hsp90 protein AFR_RS20000 PF16884 N-terminal domain of oxidoreductase AFR_RS20000 PF00107 Zinc-binding dehydrogenase AFR_RS20005 PF12695 Alpha/beta hydrolase family AFR_RS20015 PF07690 Major Facilitator Superfamily AFR_RS20050 PF07690 Major Facilitator Superfamily AFR_RS20060 PF00440 Bacterial regulatory proteins, tetR family AFR_RS20070 PF02447 GntP family permease AFR_RS20080 PF00005 ABC transporter AFR_RS20080 PF12704 MacB-like periplasmic core domain AFR_RS20080 PF02687 FtsX-like permease family AFR_RS20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS20090 PF07730 Histidine kinase AFR_RS20095 PF01339 CheB methylesterase AFR_RS20095 PF00072 Response regulator receiver domain AFR_RS20100 PF00296 Luciferase-like monooxygenase AFR_RS20115 PF00905 Penicillin binding protein transpeptidase domain AFR_RS20115 PF00912 Transglycosylase AFR_RS20120 PF00072 Response regulator receiver domain AFR_RS20125 PF17203 Single cache domain 3 AFR_RS20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS20130 PF00375 Sodium:dicarboxylate symporter family AFR_RS20140 PF00356 Bacterial regulatory proteins, lacI family AFR_RS20145 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AFR_RS20145 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AFR_RS20170 PF01740 STAS domain AFR_RS20170 PF00916 Sulfate permease family AFR_RS20175 PF13411 MerR HTH family regulatory protein AFR_RS20180 PF07690 Major Facilitator Superfamily AFR_RS20190 PF08281 Sigma-70, region 4 AFR_RS20190 PF04542 Sigma-70 region 2 AFR_RS20205 PF00106 short chain dehydrogenase AFR_RS20210 PF00809 Pterin binding enzyme AFR_RS20215 PF00664 ABC transporter transmembrane region AFR_RS20215 PF00005 ABC transporter AFR_RS20220 PF00664 ABC transporter transmembrane region AFR_RS20220 PF00005 ABC transporter AFR_RS20225 PF07690 Major Facilitator Superfamily AFR_RS20250 PF00296 Luciferase-like monooxygenase AFR_RS20300 PF03793 PASTA domain AFR_RS20300 PF00069 Protein kinase domain AFR_RS20305 PF00664 ABC transporter transmembrane region AFR_RS20305 PF00005 ABC transporter AFR_RS20310 PF02322 Cytochrome bd terminal oxidase subunit II AFR_RS20315 PF01654 Cytochrome bd terminal oxidase subunit I AFR_RS20320 PF03965 Penicillinase repressor AFR_RS20330 PF01476 LysM domain AFR_RS20330 PF00877 NlpC/P60 family AFR_RS20330 PF08239 Bacterial SH3 domain AFR_RS20335 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AFR_RS20340 PF01047 MarR family AFR_RS20345 PF06441 Epoxide hydrolase N terminus AFR_RS20350 PF05231 MASE1 AFR_RS20350 PF13426 PAS domain AFR_RS20350 PF08448 PAS fold AFR_RS20350 PF00563 EAL domain AFR_RS20350 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS20350 PF08447 PAS fold AFR_RS20355 PF00106 short chain dehydrogenase AFR_RS20365 PF00561 alpha/beta hydrolase fold AFR_RS20370 PF01434 Peptidase family M41 AFR_RS20370 PF06480 FtsH Extracellular AFR_RS20370 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS20370 PF17862 AAA+ lid domain AFR_RS20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS20405 PF03466 LysR substrate binding domain AFR_RS20420 PF00392 Bacterial regulatory proteins, gntR family AFR_RS20420 PF07702 UTRA domain AFR_RS20425 PF00290 Tryptophan synthase alpha chain AFR_RS20430 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS20445 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS20450 PF00072 Response regulator receiver domain AFR_RS20450 PF00196 Bacterial regulatory proteins, luxR family AFR_RS20455 PF07730 Histidine kinase AFR_RS20460 PF12146 Serine aminopeptidase, S33 AFR_RS20465 PF01638 HxlR-like helix-turn-helix AFR_RS20475 PF00005 ABC transporter AFR_RS20485 PF00486 Transcriptional regulatory protein, C terminal AFR_RS20485 PF00072 Response regulator receiver domain AFR_RS20490 PF00672 HAMP domain AFR_RS20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS20490 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS20525 PF01022 Bacterial regulatory protein, arsR family AFR_RS20545 PF00072 Response regulator receiver domain AFR_RS20545 PF00196 Bacterial regulatory proteins, luxR family AFR_RS20550 PF07730 Histidine kinase AFR_RS20565 PF03060 Nitronate monooxygenase AFR_RS20580 PF06628 Catalase-related immune-responsive AFR_RS20580 PF18011 C-terminal domain found in long catalases AFR_RS20580 PF00199 Catalase AFR_RS20585 PF00561 alpha/beta hydrolase fold AFR_RS20595 PF00005 ABC transporter AFR_RS20595 PF09383 NIL domain AFR_RS20600 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS20605 PF03180 NLPA lipoprotein AFR_RS20620 PF00342 Phosphoglucose isomerase AFR_RS20630 PF00041 Fibronectin type III domain AFR_RS20630 PF00704 Glycosyl hydrolases family 18 AFR_RS20635 PF01810 LysE type translocator AFR_RS20645 PF03358 NADPH-dependent FMN reductase AFR_RS20650 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS20655 PF00440 Bacterial regulatory proteins, tetR family AFR_RS20670 PF00480 ROK family AFR_RS20675 PF07690 Major Facilitator Superfamily AFR_RS20680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFR_RS20680 PF13378 Enolase C-terminal domain-like AFR_RS20685 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS20690 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS20695 PF00005 ABC transporter AFR_RS20695 PF08402 TOBE domain AFR_RS20705 PF00356 Bacterial regulatory proteins, lacI family AFR_RS20710 PF00356 Bacterial regulatory proteins, lacI family AFR_RS20735 PF00486 Transcriptional regulatory protein, C terminal AFR_RS20735 PF00072 Response regulator receiver domain AFR_RS20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS20740 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS20740 PF00672 HAMP domain AFR_RS20750 PF00005 ABC transporter AFR_RS20755 PF00005 ABC transporter AFR_RS20755 PF12704 MacB-like periplasmic core domain AFR_RS20755 PF02687 FtsX-like permease family AFR_RS20770 PF00196 Bacterial regulatory proteins, luxR family AFR_RS20770 PF00072 Response regulator receiver domain AFR_RS20775 PF02868 Thermolysin metallopeptidase, alpha-helical domain AFR_RS20775 PF01447 Thermolysin metallopeptidase, catalytic domain AFR_RS20775 PF04389 Peptidase family M28 AFR_RS20795 PF03741 Integral membrane protein TerC family AFR_RS20800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFR_RS20840 PF00440 Bacterial regulatory proteins, tetR family AFR_RS20840 PF13977 BetI-type transcriptional repressor, C-terminal AFR_RS20855 PF00294 pfkB family carbohydrate kinase AFR_RS20865 PF04962 KduI/IolB family AFR_RS20870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFR_RS20870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS20870 PF00205 Thiamine pyrophosphate enzyme, central domain AFR_RS20875 PF00171 Aldehyde dehydrogenase family AFR_RS20880 PF01261 Xylose isomerase-like TIM barrel AFR_RS20890 PF02653 Branched-chain amino acid transport system / permease component AFR_RS20895 PF00005 ABC transporter AFR_RS20900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS20900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS20905 PF01261 Xylose isomerase-like TIM barrel AFR_RS20915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS20915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS20920 PF00356 Bacterial regulatory proteins, lacI family AFR_RS20925 PF00691 OmpA family AFR_RS20925 PF05736 OprF membrane domain AFR_RS20930 PF01261 Xylose isomerase-like TIM barrel AFR_RS20935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS20935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS20940 PF00356 Bacterial regulatory proteins, lacI family AFR_RS20945 PF14535 AMP-binding enzyme C-terminal domain AFR_RS20945 PF00501 AMP-binding enzyme AFR_RS20950 PF00440 Bacterial regulatory proteins, tetR family AFR_RS20950 PF18665 Tetracyclin repressor-like, C-terminal domain AFR_RS20955 PF03061 Thioesterase superfamily AFR_RS20965 PF02803 Thiolase, C-terminal domain AFR_RS20965 PF00108 Thiolase, N-terminal domain AFR_RS20970 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS20975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFR_RS20975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFR_RS20980 PF05138 Phenylacetic acid catabolic protein AFR_RS20985 PF06243 Phenylacetic acid degradation B AFR_RS20990 PF05138 Phenylacetic acid catabolic protein AFR_RS20995 PF01883 Iron-sulfur cluster assembly protein AFR_RS21000 PF00970 Oxidoreductase FAD-binding domain AFR_RS21000 PF00175 Oxidoreductase NAD-binding domain AFR_RS21000 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS21005 PF01083 Cutinase AFR_RS21015 PF00248 Aldo/keto reductase family AFR_RS21020 PF00563 EAL domain AFR_RS21020 PF03707 Bacterial signalling protein N terminal repeat AFR_RS21020 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS21025 PF01209 ubiE/COQ5 methyltransferase family AFR_RS21055 PF04545 Sigma-70, region 4 AFR_RS21055 PF04542 Sigma-70 region 2 AFR_RS21065 PF03176 MMPL family AFR_RS21075 PF00196 Bacterial regulatory proteins, luxR family AFR_RS21075 PF00072 Response regulator receiver domain AFR_RS21085 PF00005 ABC transporter AFR_RS21120 PF12857 TOBE-like domain AFR_RS21120 PF00005 ABC transporter AFR_RS21170 PF12833 Helix-turn-helix domain AFR_RS21170 PF14525 AraC-binding-like domain AFR_RS21190 PF00483 Nucleotidyl transferase AFR_RS21195 PF00534 Glycosyl transferases group 1 AFR_RS21195 PF13439 Glycosyltransferase Family 4 AFR_RS21200 PF01593 Flavin containing amine oxidoreductase AFR_RS21205 PF02638 Glycosyl hydrolase-like 10 AFR_RS21210 PF12848 ABC transporter AFR_RS21210 PF16326 ABC transporter C-terminal domain AFR_RS21210 PF00005 ABC transporter AFR_RS21215 PF02567 Phenazine biosynthesis-like protein AFR_RS21220 PF01078 Magnesium chelatase, subunit ChlI AFR_RS21220 PF17863 AAA lid domain AFR_RS21230 PF01066 CDP-alcohol phosphatidyltransferase AFR_RS21240 PF06947 Protein of unknown function (DUF1290) AFR_RS21250 PF01597 Glycine cleavage H-protein AFR_RS21255 PF00498 FHA domain AFR_RS21260 PF00376 MerR family regulatory protein AFR_RS21265 PF02577 Bifunctional nuclease AFR_RS21270 PF13411 MerR HTH family regulatory protein AFR_RS21275 PF17755 UvrA DNA-binding domain AFR_RS21275 PF17760 UvrA interaction domain AFR_RS21275 PF00005 ABC transporter AFR_RS21280 PF03848 Tellurite resistance protein TehB AFR_RS21290 PF03466 LysR substrate binding domain AFR_RS21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS21295 PF00892 EamA-like transporter family AFR_RS21300 PF00313 'Cold-shock' DNA-binding domain AFR_RS21305 PF08241 Methyltransferase domain AFR_RS21320 PF13537 Glutamine amidotransferase domain AFR_RS21320 PF00733 Asparagine synthase AFR_RS21325 PF00486 Transcriptional regulatory protein, C terminal AFR_RS21325 PF00072 Response regulator receiver domain AFR_RS21330 PF00672 HAMP domain AFR_RS21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS21330 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS21360 PF00248 Aldo/keto reductase family AFR_RS21365 PF02347 Glycine cleavage system P-protein AFR_RS21375 PF00425 chorismate binding enzyme AFR_RS21375 PF04715 Anthranilate synthase component I, N terminal region AFR_RS21390 PF08281 Sigma-70, region 4 AFR_RS21390 PF04542 Sigma-70 region 2 AFR_RS21395 PF01327 Polypeptide deformylase AFR_RS21405 PF00293 NUDIX domain AFR_RS21410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFR_RS21410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFR_RS21420 PF06276 Ferric iron reductase FhuF-like transporter AFR_RS21420 PF04183 IucA / IucC family AFR_RS21435 PF00005 ABC transporter AFR_RS21445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS21445 PF07730 Histidine kinase AFR_RS21450 PF00072 Response regulator receiver domain AFR_RS21450 PF00196 Bacterial regulatory proteins, luxR family AFR_RS21455 PF04539 Sigma-70 region 3 AFR_RS21455 PF04542 Sigma-70 region 2 AFR_RS21455 PF04545 Sigma-70, region 4 AFR_RS21470 PF00005 ABC transporter AFR_RS21470 PF12848 ABC transporter AFR_RS21475 PF00589 Phage integrase family AFR_RS21475 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS21480 PF02673 Bacitracin resistance protein BacA AFR_RS21495 PF12697 Alpha/beta hydrolase family AFR_RS21505 PF00067 Cytochrome P450 AFR_RS21510 PF06902 Divergent 4Fe-4S mono-cluster AFR_RS21525 PF11700 Vacuole effluxer Atg22 like AFR_RS21540 PF00350 Dynamin family AFR_RS21545 PF00350 Dynamin family AFR_RS21575 PF04951 D-aminopeptidase AFR_RS21580 PF01553 Acyltransferase AFR_RS21620 PF00440 Bacterial regulatory proteins, tetR family AFR_RS21640 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS21640 PF00589 Phage integrase family AFR_RS21645 PF00561 alpha/beta hydrolase fold AFR_RS21650 PF02566 OsmC-like protein AFR_RS21655 PF01047 MarR family AFR_RS21670 PF03928 Haem-degrading AFR_RS21675 PF00009 Elongation factor Tu GTP binding domain AFR_RS21675 PF03764 Elongation factor G, domain IV AFR_RS21675 PF00679 Elongation factor G C-terminus AFR_RS21690 PF00296 Luciferase-like monooxygenase AFR_RS21725 PF00072 Response regulator receiver domain AFR_RS21725 PF00196 Bacterial regulatory proteins, luxR family AFR_RS21740 PF07730 Histidine kinase AFR_RS21745 PF00072 Response regulator receiver domain AFR_RS21745 PF00196 Bacterial regulatory proteins, luxR family AFR_RS21755 PF08241 Methyltransferase domain AFR_RS21760 PF00561 alpha/beta hydrolase fold AFR_RS21765 PF01494 FAD binding domain AFR_RS21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS21795 PF03466 LysR substrate binding domain AFR_RS21805 PF00563 EAL domain AFR_RS21805 PF03707 Bacterial signalling protein N terminal repeat AFR_RS21805 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS21815 PF00893 Small Multidrug Resistance protein AFR_RS21825 PF00356 Bacterial regulatory proteins, lacI family AFR_RS21830 PF01547 Bacterial extracellular solute-binding protein AFR_RS21835 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS21840 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS21850 PF01229 Glycosyl hydrolases family 39 AFR_RS21855 PF00072 Response regulator receiver domain AFR_RS21855 PF00196 Bacterial regulatory proteins, luxR family AFR_RS21860 PF07730 Histidine kinase AFR_RS21880 PF00082 Subtilase family AFR_RS21880 PF05922 Peptidase inhibitor I9 AFR_RS21925 PF00072 Response regulator receiver domain AFR_RS21925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AFR_RS21925 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS21925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS21925 PF00672 HAMP domain AFR_RS21925 PF01627 Hpt domain AFR_RS21935 PF13397 RNA polymerase-binding protein AFR_RS21945 PF00535 Glycosyl transferase family 2 AFR_RS21950 PF00795 Carbon-nitrogen hydrolase AFR_RS21950 PF00535 Glycosyl transferase family 2 AFR_RS21955 PF13941 MutL protein AFR_RS21960 PF03061 Thioesterase superfamily AFR_RS21965 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase AFR_RS21965 PF02310 B12 binding domain AFR_RS21970 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit AFR_RS21990 PF05532 CsbD-like AFR_RS21995 PF08241 Methyltransferase domain AFR_RS22005 PF00072 Response regulator receiver domain AFR_RS22005 PF00486 Transcriptional regulatory protein, C terminal AFR_RS22010 PF00561 alpha/beta hydrolase fold AFR_RS22015 PF01037 Lrp/AsnC ligand binding domain AFR_RS22020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS22020 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS22020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS22025 PF01367 5'-3' exonuclease, C-terminal SAM fold AFR_RS22025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFR_RS22030 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS22030 PF08447 PAS fold AFR_RS22030 PF00563 EAL domain AFR_RS22030 PF08448 PAS fold AFR_RS22040 PF00440 Bacterial regulatory proteins, tetR family AFR_RS22045 PF01738 Dienelactone hydrolase family AFR_RS22065 PF11606 Family 31 carbohydrate binding protein AFR_RS22085 PF00196 Bacterial regulatory proteins, luxR family AFR_RS22085 PF00072 Response regulator receiver domain AFR_RS22095 PF00005 ABC transporter AFR_RS22140 PF00561 alpha/beta hydrolase fold AFR_RS22155 PF05067 Manganese containing catalase AFR_RS22170 PF01566 Natural resistance-associated macrophage protein AFR_RS22175 PF00486 Transcriptional regulatory protein, C terminal AFR_RS22175 PF00072 Response regulator receiver domain AFR_RS22220 PF13732 Domain of unknown function (DUF4162) AFR_RS22220 PF00005 ABC transporter AFR_RS22225 PF01061 ABC-2 type transporter AFR_RS22230 PF05139 Erythromycin esterase AFR_RS22250 PF05977 Transmembrane secretion effector AFR_RS22290 PF00440 Bacterial regulatory proteins, tetR family AFR_RS22290 PF17754 MftR C-terminal domain AFR_RS22295 PF00106 short chain dehydrogenase AFR_RS22320 PF04542 Sigma-70 region 2 AFR_RS22320 PF04545 Sigma-70, region 4 AFR_RS22330 PF00196 Bacterial regulatory proteins, luxR family AFR_RS22330 PF00072 Response regulator receiver domain AFR_RS22345 PF07730 Histidine kinase AFR_RS22345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS22345 PF13492 GAF domain AFR_RS22345 PF13185 GAF domain AFR_RS22385 PF01546 Peptidase family M20/M25/M40 AFR_RS22385 PF07687 Peptidase dimerisation domain AFR_RS22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS22390 PF03466 LysR substrate binding domain AFR_RS22400 PF00581 Rhodanese-like domain AFR_RS22405 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22410 PF00005 ABC transporter AFR_RS22420 PF00296 Luciferase-like monooxygenase AFR_RS22435 PF02913 FAD linked oxidases, C-terminal domain AFR_RS22435 PF01565 FAD binding domain AFR_RS22450 PF01042 Endoribonuclease L-PSP AFR_RS22455 PF00296 Luciferase-like monooxygenase AFR_RS22460 PF09084 NMT1/THI5 like AFR_RS22465 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22470 PF00005 ABC transporter AFR_RS22475 PF05360 yiaA/B two helix domain AFR_RS22490 PF02910 Fumarate reductase flavoprotein C-term AFR_RS22490 PF00890 FAD binding domain AFR_RS22495 PF00296 Luciferase-like monooxygenase AFR_RS22500 PF00296 Luciferase-like monooxygenase AFR_RS22505 PF00296 Luciferase-like monooxygenase AFR_RS22510 PF00296 Luciferase-like monooxygenase AFR_RS22515 PF00005 ABC transporter AFR_RS22515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS22520 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22520 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS22525 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS22540 PF12704 MacB-like periplasmic core domain AFR_RS22540 PF02687 FtsX-like permease family AFR_RS22540 PF00005 ABC transporter AFR_RS22555 PF00582 Universal stress protein family AFR_RS22560 PF13520 Amino acid permease AFR_RS22570 PF00701 Dihydrodipicolinate synthetase family AFR_RS22585 PF01055 Glycosyl hydrolases family 31 AFR_RS22585 PF13802 Galactose mutarotase-like AFR_RS22590 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22595 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22615 PF00356 Bacterial regulatory proteins, lacI family AFR_RS22630 PF00534 Glycosyl transferases group 1 AFR_RS22630 PF13439 Glycosyltransferase Family 4 AFR_RS22635 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AFR_RS22640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS22640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS22645 PF01116 Fructose-bisphosphate aldolase class-II AFR_RS22650 PF00294 pfkB family carbohydrate kinase AFR_RS22660 PF00294 pfkB family carbohydrate kinase AFR_RS22670 PF08241 Methyltransferase domain AFR_RS22685 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22690 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS22695 PF01547 Bacterial extracellular solute-binding protein AFR_RS22700 PF01380 SIS domain AFR_RS22705 PF11975 Family 4 glycosyl hydrolase C-terminal domain AFR_RS22705 PF02056 Family 4 glycosyl hydrolase AFR_RS22710 PF08220 DeoR-like helix-turn-helix domain AFR_RS22710 PF00455 DeoR C terminal sensor domain AFR_RS22715 PF04973 Nicotinamide mononucleotide transporter AFR_RS22740 PF00106 short chain dehydrogenase AFR_RS22760 PF12697 Alpha/beta hydrolase family AFR_RS22770 PF01434 Peptidase family M41 AFR_RS22770 PF17862 AAA+ lid domain AFR_RS22770 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS22775 PF13411 MerR HTH family regulatory protein AFR_RS22775 PF07739 TipAS antibiotic-recognition domain AFR_RS22780 PF01061 ABC-2 type transporter AFR_RS22785 PF00005 ABC transporter AFR_RS22785 PF13732 Domain of unknown function (DUF4162) AFR_RS22790 PF00348 Polyprenyl synthetase AFR_RS22830 PF03793 PASTA domain AFR_RS22830 PF00069 Protein kinase domain AFR_RS22840 PF06259 Alpha/beta hydrolase AFR_RS22850 PF01494 FAD binding domain AFR_RS22880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS22880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS22880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS22890 PF00113 Enolase, C-terminal TIM barrel domain AFR_RS22890 PF03952 Enolase, N-terminal domain AFR_RS22895 PF13411 MerR HTH family regulatory protein AFR_RS22900 PF03454 MoeA C-terminal region (domain IV) AFR_RS22900 PF00994 Probable molybdopterin binding domain AFR_RS22900 PF03453 MoeA N-terminal region (domain I and II) AFR_RS22905 PF01209 ubiE/COQ5 methyltransferase family AFR_RS22910 PF16916 Dimerisation domain of Zinc Transporter AFR_RS22910 PF01545 Cation efflux family AFR_RS22920 PF00672 HAMP domain AFR_RS22920 PF16591 Helical bimodular sensor domain AFR_RS22920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS22940 PF01799 [2Fe-2S] binding domain AFR_RS22940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFR_RS22940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFR_RS22960 PF13520 Amino acid permease AFR_RS22965 PF00072 Response regulator receiver domain AFR_RS22965 PF00486 Transcriptional regulatory protein, C terminal AFR_RS22970 PF02146 Sir2 family AFR_RS23000 PF04542 Sigma-70 region 2 AFR_RS23000 PF12680 SnoaL-like domain AFR_RS23000 PF08281 Sigma-70, region 4 AFR_RS23005 PF07859 alpha/beta hydrolase fold AFR_RS23030 PF01734 Patatin-like phospholipase AFR_RS23035 PF09364 XFP N-terminal domain AFR_RS23035 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AFR_RS23035 PF09363 XFP C-terminal domain AFR_RS23045 PF00248 Aldo/keto reductase family AFR_RS23055 PF00459 Inositol monophosphatase family AFR_RS23060 PF03466 LysR substrate binding domain AFR_RS23060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS23070 PF07690 Major Facilitator Superfamily AFR_RS23085 PF00561 alpha/beta hydrolase fold AFR_RS23100 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS23100 PF00107 Zinc-binding dehydrogenase AFR_RS23125 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS23125 PF00553 Cellulose binding domain AFR_RS23130 PF01494 FAD binding domain AFR_RS23135 PF00440 Bacterial regulatory proteins, tetR family AFR_RS23150 PF01740 STAS domain AFR_RS23160 PF11066 Protein of unknown function (DUF2867) AFR_RS23160 PF13460 NAD(P)H-binding AFR_RS23165 PF00440 Bacterial regulatory proteins, tetR family AFR_RS23180 PF00175 Oxidoreductase NAD-binding domain AFR_RS23180 PF00970 Oxidoreductase FAD-binding domain AFR_RS23180 PF00042 Globin AFR_RS23190 PF07690 Major Facilitator Superfamily AFR_RS23200 PF00106 short chain dehydrogenase AFR_RS23210 PF00196 Bacterial regulatory proteins, luxR family AFR_RS23215 PF06441 Epoxide hydrolase N terminus AFR_RS23220 PF06441 Epoxide hydrolase N terminus AFR_RS23230 PF01336 OB-fold nucleic acid binding domain AFR_RS23230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFR_RS23230 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFR_RS23230 PF02811 PHP domain AFR_RS23230 PF14579 Helix-hairpin-helix motif AFR_RS23255 PF03176 MMPL family AFR_RS23275 PF00296 Luciferase-like monooxygenase AFR_RS23285 PF00881 Nitroreductase family AFR_RS23305 PF02525 Flavodoxin-like fold AFR_RS23335 PF00106 short chain dehydrogenase AFR_RS23380 PF01116 Fructose-bisphosphate aldolase class-II AFR_RS23385 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS23390 PF02734 DAK2 domain AFR_RS23395 PF02733 Dak1 domain AFR_RS23405 PF01022 Bacterial regulatory protein, arsR family AFR_RS23425 PF02735 Ku70/Ku80 beta-barrel domain AFR_RS23435 PF00296 Luciferase-like monooxygenase AFR_RS23455 PF00106 short chain dehydrogenase AFR_RS23465 PF00535 Glycosyl transferase family 2 AFR_RS23465 PF02709 N-terminal domain of galactosyltransferase AFR_RS23470 PF04101 Glycosyltransferase family 28 C-terminal domain AFR_RS23470 PF03033 Glycosyltransferase family 28 N-terminal domain AFR_RS23475 PF00534 Glycosyl transferases group 1 AFR_RS23475 PF13439 Glycosyltransferase Family 4 AFR_RS23495 PF00535 Glycosyl transferase family 2 AFR_RS23540 PF01380 SIS domain AFR_RS23550 PF00199 Catalase AFR_RS23550 PF18011 C-terminal domain found in long catalases AFR_RS23550 PF06628 Catalase-related immune-responsive AFR_RS23570 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS23570 PF00107 Zinc-binding dehydrogenase AFR_RS23580 PF03033 Glycosyltransferase family 28 N-terminal domain AFR_RS23585 PF13538 UvrD-like helicase C-terminal domain AFR_RS23605 PF12680 SnoaL-like domain AFR_RS23605 PF08281 Sigma-70, region 4 AFR_RS23605 PF04542 Sigma-70 region 2 AFR_RS23620 PF00072 Response regulator receiver domain AFR_RS23620 PF00486 Transcriptional regulatory protein, C terminal AFR_RS23625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS23625 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS23625 PF00672 HAMP domain AFR_RS23640 PF13847 Methyltransferase domain AFR_RS23650 PF00535 Glycosyl transferase family 2 AFR_RS23655 PF01370 NAD dependent epimerase/dehydratase family AFR_RS23685 PF00571 CBS domain AFR_RS23695 PF06441 Epoxide hydrolase N terminus AFR_RS23700 PF17754 MftR C-terminal domain AFR_RS23700 PF00440 Bacterial regulatory proteins, tetR family AFR_RS23705 PF01494 FAD binding domain AFR_RS23715 PF00722 Glycosyl hydrolases family 16 AFR_RS23720 PF02016 LD-carboxypeptidase N-terminal domain AFR_RS23720 PF17676 LD-carboxypeptidase C-terminal domain AFR_RS23730 PF00665 Integrase core domain AFR_RS23730 PF13936 Helix-turn-helix domain AFR_RS23745 PF01522 Polysaccharide deacetylase AFR_RS23750 PF12697 Alpha/beta hydrolase family AFR_RS23770 PF01032 FecCD transport family AFR_RS23775 PF01032 FecCD transport family AFR_RS23780 PF00005 ABC transporter AFR_RS23785 PF00005 ABC transporter AFR_RS23785 PF00664 ABC transporter transmembrane region AFR_RS23790 PF00005 ABC transporter AFR_RS23790 PF00664 ABC transporter transmembrane region AFR_RS23795 PF13847 Methyltransferase domain AFR_RS23800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS23800 PF03466 LysR substrate binding domain AFR_RS23815 PF03621 MbtH-like protein AFR_RS23820 PF00501 AMP-binding enzyme AFR_RS23820 PF00550 Phosphopantetheine attachment site AFR_RS23820 PF00668 Condensation domain AFR_RS23820 PF13193 AMP-binding enzyme C-terminal domain AFR_RS23825 PF13193 AMP-binding enzyme C-terminal domain AFR_RS23825 PF00668 Condensation domain AFR_RS23825 PF00550 Phosphopantetheine attachment site AFR_RS23825 PF00501 AMP-binding enzyme AFR_RS23830 PF13193 AMP-binding enzyme C-terminal domain AFR_RS23830 PF08241 Methyltransferase domain AFR_RS23830 PF00391 PEP-utilising enzyme, mobile domain AFR_RS23830 PF00501 AMP-binding enzyme AFR_RS23830 PF00668 Condensation domain AFR_RS23830 PF00975 Thioesterase domain AFR_RS23830 PF00550 Phosphopantetheine attachment site AFR_RS23835 PF00890 FAD binding domain AFR_RS23835 PF04205 FMN-binding domain AFR_RS23835 PF03358 NADPH-dependent FMN reductase AFR_RS23845 PF01614 Bacterial transcriptional regulator AFR_RS23845 PF09339 IclR helix-turn-helix domain AFR_RS23850 PF00106 short chain dehydrogenase AFR_RS23860 PF00561 alpha/beta hydrolase fold AFR_RS23865 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFR_RS23875 PF00202 Aminotransferase class-III AFR_RS23880 PF16363 GDP-mannose 4,6 dehydratase AFR_RS23890 PF00682 HMGL-like AFR_RS23890 PF07836 DmpG-like communication domain AFR_RS23895 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AFR_RS23895 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFR_RS23900 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFR_RS23905 PF01614 Bacterial transcriptional regulator AFR_RS23905 PF09339 IclR helix-turn-helix domain AFR_RS23940 PF00485 Phosphoribulokinase / Uridine kinase family AFR_RS23945 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFR_RS23950 PF05368 NmrA-like family AFR_RS23980 PF00155 Aminotransferase class I and II AFR_RS23990 PF11774 Lsr2 AFR_RS24005 PF00106 short chain dehydrogenase AFR_RS24015 PF04542 Sigma-70 region 2 AFR_RS24015 PF08281 Sigma-70, region 4 AFR_RS24060 PF04542 Sigma-70 region 2 AFR_RS24060 PF08281 Sigma-70, region 4 AFR_RS24065 PF03795 YCII-related domain AFR_RS24070 PF04542 Sigma-70 region 2 AFR_RS24070 PF08281 Sigma-70, region 4 AFR_RS24075 PF01047 MarR family AFR_RS24080 PF00892 EamA-like transporter family AFR_RS24085 PF03741 Integral membrane protein TerC family AFR_RS24095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS24095 PF03466 LysR substrate binding domain AFR_RS24110 PF01547 Bacterial extracellular solute-binding protein AFR_RS24115 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24120 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24125 PF00343 Carbohydrate phosphorylase AFR_RS24140 PF00072 Response regulator receiver domain AFR_RS24140 PF08448 PAS fold AFR_RS24140 PF13426 PAS domain AFR_RS24140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24140 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS24145 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS24145 PF07689 KaiB domain AFR_RS24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24170 PF00005 ABC transporter AFR_RS24170 PF17760 UvrA interaction domain AFR_RS24170 PF17755 UvrA DNA-binding domain AFR_RS24200 PF00005 ABC transporter AFR_RS24205 PF00072 Response regulator receiver domain AFR_RS24205 PF00486 Transcriptional regulatory protein, C terminal AFR_RS24210 PF00672 HAMP domain AFR_RS24210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24210 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS24245 PF08220 DeoR-like helix-turn-helix domain AFR_RS24245 PF00455 DeoR C terminal sensor domain AFR_RS24265 PF02652 L-lactate permease AFR_RS24295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFR_RS24295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFR_RS24310 PF13407 Periplasmic binding protein domain AFR_RS24320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24320 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS24320 PF08448 PAS fold AFR_RS24320 PF00072 Response regulator receiver domain AFR_RS24320 PF13188 PAS domain AFR_RS24335 PF11896 Domain of unknown function (DUF3416) AFR_RS24340 PF00196 Bacterial regulatory proteins, luxR family AFR_RS24340 PF00072 Response regulator receiver domain AFR_RS24350 PF00005 ABC transporter AFR_RS24350 PF02687 FtsX-like permease family AFR_RS24350 PF12704 MacB-like periplasmic core domain AFR_RS24360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS24365 PF00440 Bacterial regulatory proteins, tetR family AFR_RS24365 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS24375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS24375 PF00005 ABC transporter AFR_RS24380 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24385 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS24385 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS24420 PF04228 Putative neutral zinc metallopeptidase AFR_RS24430 PF00672 HAMP domain AFR_RS24430 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS24445 PF17827 PrmC N-terminal domain AFR_RS24445 PF05175 Methyltransferase small domain AFR_RS24450 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS24455 PF00107 Zinc-binding dehydrogenase AFR_RS24455 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS24455 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS24470 PF01384 Phosphate transporter family AFR_RS24480 PF00440 Bacterial regulatory proteins, tetR family AFR_RS24485 PF00106 short chain dehydrogenase AFR_RS24515 PF00107 Zinc-binding dehydrogenase AFR_RS24515 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS24530 PF00005 ABC transporter AFR_RS24530 PF08402 TOBE domain AFR_RS24535 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24545 PF00072 Response regulator receiver domain AFR_RS24545 PF00486 Transcriptional regulatory protein, C terminal AFR_RS24550 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AFR_RS24550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24550 PF00672 HAMP domain AFR_RS24550 PF08448 PAS fold AFR_RS24550 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS24555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AFR_RS24560 PF00005 ABC transporter AFR_RS24565 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AFR_RS24570 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS24580 PF03795 YCII-related domain AFR_RS24585 PF04542 Sigma-70 region 2 AFR_RS24585 PF08281 Sigma-70, region 4 AFR_RS24590 PF01209 ubiE/COQ5 methyltransferase family AFR_RS24610 PF00484 Carbonic anhydrase AFR_RS24615 PF00890 FAD binding domain AFR_RS24625 PF17964 Bacterial Ig domain AFR_RS24625 PF03734 L,D-transpeptidase catalytic domain AFR_RS24635 PF07690 Major Facilitator Superfamily AFR_RS24655 PF00356 Bacterial regulatory proteins, lacI family AFR_RS24665 PF00563 EAL domain AFR_RS24665 PF03707 Bacterial signalling protein N terminal repeat AFR_RS24665 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS24670 PF00009 Elongation factor Tu GTP binding domain AFR_RS24670 PF03764 Elongation factor G, domain IV AFR_RS24670 PF00679 Elongation factor G C-terminus AFR_RS24675 PF00583 Acetyltransferase (GNAT) family AFR_RS24685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS24685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS24690 PF03773 Predicted permease AFR_RS24715 PF01266 FAD dependent oxidoreductase AFR_RS24715 PF05690 Thiazole biosynthesis protein ThiG AFR_RS24725 PF00271 Helicase conserved C-terminal domain AFR_RS24725 PF03880 DbpA RNA binding domain AFR_RS24725 PF00270 DEAD/DEAH box helicase AFR_RS24740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24740 PF07730 Histidine kinase AFR_RS24745 PF00072 Response regulator receiver domain AFR_RS24745 PF00196 Bacterial regulatory proteins, luxR family AFR_RS24750 PF07519 Tannase and feruloyl esterase AFR_RS24765 PF04542 Sigma-70 region 2 AFR_RS24765 PF08281 Sigma-70, region 4 AFR_RS24790 PF00248 Aldo/keto reductase family AFR_RS24810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFR_RS24810 PF00128 Alpha amylase, catalytic domain AFR_RS24815 PF07690 Major Facilitator Superfamily AFR_RS24820 PF13847 Methyltransferase domain AFR_RS24825 PF05491 RuvB C-terminal winged helix domain AFR_RS24825 PF17864 RuvB AAA lid domain AFR_RS24825 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFR_RS24845 PF00156 Phosphoribosyl transferase domain AFR_RS24845 PF05139 Erythromycin esterase AFR_RS24855 PF04542 Sigma-70 region 2 AFR_RS24855 PF08281 Sigma-70, region 4 AFR_RS24875 PF12695 Alpha/beta hydrolase family AFR_RS24885 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS24885 PF00553 Cellulose binding domain AFR_RS24885 PF00041 Fibronectin type III domain AFR_RS24905 PF16353 Domain of unknown function(DUF4981) AFR_RS24905 PF02837 Glycosyl hydrolases family 2, sugar binding domain AFR_RS24905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AFR_RS24905 PF00703 Glycosyl hydrolases family 2 AFR_RS24905 PF02929 Beta galactosidase small chain AFR_RS24915 PF12695 Alpha/beta hydrolase family AFR_RS24930 PF13466 STAS domain AFR_RS24930 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS24930 PF08448 PAS fold AFR_RS24930 PF13581 Histidine kinase-like ATPase domain AFR_RS24950 PF12680 SnoaL-like domain AFR_RS24950 PF08281 Sigma-70, region 4 AFR_RS24950 PF04542 Sigma-70 region 2 AFR_RS24965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS24965 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFR_RS24970 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS24970 PF00563 EAL domain AFR_RS24970 PF08448 PAS fold AFR_RS24970 PF08447 PAS fold AFR_RS24975 PF05231 MASE1 AFR_RS24975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS24975 PF07730 Histidine kinase AFR_RS24980 PF00196 Bacterial regulatory proteins, luxR family AFR_RS24980 PF00072 Response regulator receiver domain AFR_RS24985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFR_RS24985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFR_RS24985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFR_RS24985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFR_RS24990 PF04234 CopC domain AFR_RS25000 PF03883 Peroxide stress protein YaaA AFR_RS25005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFR_RS25015 PF03176 MMPL family AFR_RS25020 PF00106 short chain dehydrogenase AFR_RS25025 PF01638 HxlR-like helix-turn-helix AFR_RS25040 PF05139 Erythromycin esterase AFR_RS25050 PF04434 SWIM zinc finger AFR_RS25055 PF00176 SNF2 family N-terminal domain AFR_RS25055 PF00271 Helicase conserved C-terminal domain AFR_RS25055 PF12419 SNF2 Helicase protein AFR_RS25080 PF01047 MarR family AFR_RS25085 PF07690 Major Facilitator Superfamily AFR_RS25090 PF07478 D-ala D-ala ligase C-terminus AFR_RS25090 PF01820 D-ala D-ala ligase N-terminus AFR_RS25105 PF13520 Amino acid permease AFR_RS25120 PF00069 Protein kinase domain AFR_RS25145 PF00535 Glycosyl transferase family 2 AFR_RS25170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AFR_RS25170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AFR_RS25195 PF00149 Calcineurin-like phosphoesterase AFR_RS25205 PF00005 ABC transporter AFR_RS25205 PF00664 ABC transporter transmembrane region AFR_RS25210 PF13180 PDZ domain AFR_RS25215 PF00753 Metallo-beta-lactamase superfamily AFR_RS25235 PF00356 Bacterial regulatory proteins, lacI family AFR_RS25250 PF00211 Adenylate and Guanylate cyclase catalytic domain AFR_RS25250 PF13191 AAA ATPase domain AFR_RS25255 PF04542 Sigma-70 region 2 AFR_RS25255 PF04545 Sigma-70, region 4 AFR_RS25260 PF02016 LD-carboxypeptidase N-terminal domain AFR_RS25260 PF17676 LD-carboxypeptidase C-terminal domain AFR_RS25265 PF13556 PucR C-terminal helix-turn-helix domain AFR_RS25265 PF17853 GGDEF-like domain AFR_RS25270 PF00970 Oxidoreductase FAD-binding domain AFR_RS25270 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS25270 PF00175 Oxidoreductase NAD-binding domain AFR_RS25275 PF00487 Fatty acid desaturase AFR_RS25280 PF04030 D-arabinono-1,4-lactone oxidase AFR_RS25280 PF01565 FAD binding domain AFR_RS25285 PF04542 Sigma-70 region 2 AFR_RS25285 PF12680 SnoaL-like domain AFR_RS25285 PF08281 Sigma-70, region 4 AFR_RS25295 PF00743 Flavin-binding monooxygenase-like AFR_RS25305 PF02705 K+ potassium transporter AFR_RS25315 PF01139 tRNA-splicing ligase RtcB AFR_RS25330 PF12806 Acetyl-CoA dehydrogenase C-terminal like AFR_RS25330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS25330 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS25330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS25345 PF02018 Carbohydrate binding domain AFR_RS25345 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AFR_RS25350 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AFR_RS25350 PF04616 Glycosyl hydrolases family 43 AFR_RS25355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS25355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS25405 PF08125 Mannitol dehydrogenase C-terminal domain AFR_RS25405 PF01232 Mannitol dehydrogenase Rossmann domain AFR_RS25410 PF13378 Enolase C-terminal domain-like AFR_RS25410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFR_RS25415 PF02614 Glucuronate isomerase AFR_RS25420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS25420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS25425 PF00356 Bacterial regulatory proteins, lacI family AFR_RS25435 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS25440 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS25470 PF00440 Bacterial regulatory proteins, tetR family AFR_RS25470 PF16859 Tetracyclin repressor-like, C-terminal domain AFR_RS25485 PF01494 FAD binding domain AFR_RS25490 PF00465 Iron-containing alcohol dehydrogenase AFR_RS25495 PF12833 Helix-turn-helix domain AFR_RS25500 PF00069 Protein kinase domain AFR_RS25500 PF03793 PASTA domain AFR_RS25505 PF00248 Aldo/keto reductase family AFR_RS25510 PF07282 Putative transposase DNA-binding domain AFR_RS25510 PF01385 Probable transposase AFR_RS25510 PF12323 Helix-turn-helix domain AFR_RS25520 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS25525 PF00657 GDSL-like Lipase/Acylhydrolase AFR_RS25525 PF00404 Dockerin type I domain AFR_RS25530 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AFR_RS25530 PF18416 N-acetylglucosamine binding protein domain 2 AFR_RS25535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFR_RS25545 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS25550 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS25575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFR_RS25575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFR_RS25580 PF00578 AhpC/TSA family AFR_RS25585 PF01740 STAS domain AFR_RS25595 PF01048 Phosphorylase superfamily AFR_RS25610 PF00005 ABC transporter AFR_RS25615 PF02653 Branched-chain amino acid transport system / permease component AFR_RS25630 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS25630 PF00672 HAMP domain AFR_RS25630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS25640 PF00072 Response regulator receiver domain AFR_RS25640 PF00486 Transcriptional regulatory protein, C terminal AFR_RS25645 PF00480 ROK family AFR_RS25670 PF02653 Branched-chain amino acid transport system / permease component AFR_RS25675 PF00005 ABC transporter AFR_RS25680 PF13407 Periplasmic binding protein domain AFR_RS25685 PF11762 L-arabinose isomerase C-terminal domain AFR_RS25685 PF02610 L-arabinose isomerase AFR_RS25690 PF00596 Class II Aldolase and Adducin N-terminal domain AFR_RS25695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS25695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS25700 PF00356 Bacterial regulatory proteins, lacI family AFR_RS25710 PF01243 Pyridoxamine 5'-phosphate oxidase AFR_RS25725 PF02678 Pirin AFR_RS25725 PF05726 Pirin C-terminal cupin domain AFR_RS25745 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS25745 PF05230 MASE2 domain AFR_RS25750 PF00892 EamA-like transporter family AFR_RS25755 PF12704 MacB-like periplasmic core domain AFR_RS25755 PF02687 FtsX-like permease family AFR_RS25755 PF00005 ABC transporter AFR_RS25760 PF00005 ABC transporter AFR_RS25760 PF02687 FtsX-like permease family AFR_RS25760 PF12704 MacB-like periplasmic core domain AFR_RS25765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFR_RS25795 PF00196 Bacterial regulatory proteins, luxR family AFR_RS25795 PF00072 Response regulator receiver domain AFR_RS25800 PF00672 HAMP domain AFR_RS25800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AFR_RS25800 PF07730 Histidine kinase AFR_RS25800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS25810 PF00005 ABC transporter AFR_RS25810 PF12704 MacB-like periplasmic core domain AFR_RS25810 PF02687 FtsX-like permease family AFR_RS25820 PF01739 CheR methyltransferase, SAM binding domain AFR_RS25820 PF03705 CheR methyltransferase, all-alpha domain AFR_RS25830 PF00672 HAMP domain AFR_RS25830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS25835 PF01584 CheW-like domain AFR_RS25835 PF02895 Signal transducing histidine kinase, homodimeric domain AFR_RS25835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS25835 PF01627 Hpt domain AFR_RS25835 PF07194 P2 response regulator binding domain AFR_RS25840 PF01339 CheB methylesterase AFR_RS25840 PF00072 Response regulator receiver domain AFR_RS25845 PF01590 GAF domain AFR_RS25845 PF00360 Phytochrome region AFR_RS25845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS25845 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS25845 PF08446 PAS fold AFR_RS25855 PF13302 Acetyltransferase (GNAT) domain AFR_RS25865 PF07859 alpha/beta hydrolase fold AFR_RS25870 PF12704 MacB-like periplasmic core domain AFR_RS25870 PF00005 ABC transporter AFR_RS25870 PF02687 FtsX-like permease family AFR_RS25875 PF12704 MacB-like periplasmic core domain AFR_RS25875 PF02687 FtsX-like permease family AFR_RS25875 PF00005 ABC transporter AFR_RS25885 PF00196 Bacterial regulatory proteins, luxR family AFR_RS25885 PF00072 Response regulator receiver domain AFR_RS25915 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AFR_RS25925 PF00563 EAL domain AFR_RS25930 PF01522 Polysaccharide deacetylase AFR_RS25940 PF00463 Isocitrate lyase family AFR_RS25945 PF01274 Malate synthase AFR_RS25950 PF08125 Mannitol dehydrogenase C-terminal domain AFR_RS25950 PF01232 Mannitol dehydrogenase Rossmann domain AFR_RS25955 PF03211 Pectate lyase AFR_RS25975 PF00759 Glycosyl hydrolase family 9 AFR_RS25975 PF02927 Cellulase N-terminal ig-like domain AFR_RS25975 PF02018 Carbohydrate binding domain AFR_RS26010 PF00350 Dynamin family AFR_RS26015 PF00350 Dynamin family AFR_RS26025 PF03466 LysR substrate binding domain AFR_RS26025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS26030 PF00107 Zinc-binding dehydrogenase AFR_RS26030 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS26035 PF01638 HxlR-like helix-turn-helix AFR_RS26060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS26060 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS26060 PF18158 Adaptive response protein AidB N-terminal domain AFR_RS26065 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS26065 PF03707 Bacterial signalling protein N terminal repeat AFR_RS26065 PF00563 EAL domain AFR_RS26070 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS26070 PF00563 EAL domain AFR_RS26070 PF13185 GAF domain AFR_RS26075 PF00931 NB-ARC domain AFR_RS26075 PF03704 Bacterial transcriptional activator domain AFR_RS26075 PF00486 Transcriptional regulatory protein, C terminal AFR_RS26090 PF17862 AAA+ lid domain AFR_RS26090 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS26090 PF01434 Peptidase family M41 AFR_RS26100 PF00486 Transcriptional regulatory protein, C terminal AFR_RS26100 PF03704 Bacterial transcriptional activator domain AFR_RS26100 PF00931 NB-ARC domain AFR_RS26105 PF00534 Glycosyl transferases group 1 AFR_RS26105 PF13439 Glycosyltransferase Family 4 AFR_RS26115 PF00795 Carbon-nitrogen hydrolase AFR_RS26120 PF02769 AIR synthase related protein, C-terminal domain AFR_RS26120 PF00586 AIR synthase related protein, N-terminal domain AFR_RS26120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AFR_RS26155 PF00759 Glycosyl hydrolase family 9 AFR_RS26155 PF00041 Fibronectin type III domain AFR_RS26155 PF00942 Cellulose binding domain AFR_RS26155 PF00553 Cellulose binding domain AFR_RS26160 PF00553 Cellulose binding domain AFR_RS26160 PF01341 Glycosyl hydrolases family 6 AFR_RS26165 PF00072 Response regulator receiver domain AFR_RS26165 PF00196 Bacterial regulatory proteins, luxR family AFR_RS26170 PF07730 Histidine kinase AFR_RS26175 PF03176 MMPL family AFR_RS26200 PF01810 LysE type translocator AFR_RS26220 PF01547 Bacterial extracellular solute-binding protein AFR_RS26225 PF11838 ERAP1-like C-terminal domain AFR_RS26225 PF01433 Peptidase family M1 domain AFR_RS26230 PF06736 Protein of unknown function (DUF1211) AFR_RS26255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFR_RS26255 PF13378 Enolase C-terminal domain-like AFR_RS26260 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS26265 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS26270 PF01547 Bacterial extracellular solute-binding protein AFR_RS26280 PF16363 GDP-mannose 4,6 dehydratase AFR_RS26285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFR_RS26285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS26290 PF03328 HpcH/HpaI aldolase/citrate lyase family AFR_RS26300 PF00457 Glycosyl hydrolases family 11 AFR_RS26300 PF03422 Carbohydrate binding module (family 6) AFR_RS26330 PF00196 Bacterial regulatory proteins, luxR family AFR_RS26330 PF00072 Response regulator receiver domain AFR_RS26335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS26335 PF07730 Histidine kinase AFR_RS26340 PF12704 MacB-like periplasmic core domain AFR_RS26340 PF00005 ABC transporter AFR_RS26340 PF02687 FtsX-like permease family AFR_RS26350 PF13193 AMP-binding enzyme C-terminal domain AFR_RS26350 PF00501 AMP-binding enzyme AFR_RS26360 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFR_RS26370 PF16918 Protein kinase G tetratricopeptide repeat AFR_RS26370 PF16919 Protein kinase G rubredoxin domain AFR_RS26370 PF00069 Protein kinase domain AFR_RS26380 PF00092 von Willebrand factor type A domain AFR_RS26390 PF04978 Protein of unknown function (DUF664) AFR_RS26405 PF00459 Inositol monophosphatase family AFR_RS26415 PF12680 SnoaL-like domain AFR_RS26415 PF08281 Sigma-70, region 4 AFR_RS26415 PF04542 Sigma-70 region 2 AFR_RS26420 PF00544 Pectate lyase AFR_RS26430 PF01965 DJ-1/PfpI family AFR_RS26430 PF12833 Helix-turn-helix domain AFR_RS26445 PF00356 Bacterial regulatory proteins, lacI family AFR_RS26455 PF00271 Helicase conserved C-terminal domain AFR_RS26455 PF00270 DEAD/DEAH box helicase AFR_RS26455 PF08148 DSHCT (NUC185) domain AFR_RS26460 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS26470 PF00781 Diacylglycerol kinase catalytic domain AFR_RS26475 PF00902 Sec-independent protein translocase protein (TatC) AFR_RS26480 PF02416 mttA/Hcf106 family AFR_RS26490 PF13280 WYL domain AFR_RS26495 PF13280 WYL domain AFR_RS26510 PF01596 O-methyltransferase AFR_RS26525 PF03136 Pup-ligase protein AFR_RS26530 PF16363 GDP-mannose 4,6 dehydratase AFR_RS26535 PF00227 Proteasome subunit AFR_RS26540 PF00227 Proteasome subunit AFR_RS26545 PF05639 Pup-like protein AFR_RS26550 PF03136 Pup-ligase protein AFR_RS26555 PF17758 Proteasomal ATPase OB N-terminal domain AFR_RS26555 PF16450 Proteasomal ATPase OB C-terminal domain AFR_RS26555 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS26570 PF08704 tRNA methyltransferase complex GCD14 subunit AFR_RS26575 PF02163 Peptidase family M50 AFR_RS26575 PF00571 CBS domain AFR_RS26585 PF00196 Bacterial regulatory proteins, luxR family AFR_RS26585 PF00072 Response regulator receiver domain AFR_RS26600 PF00005 ABC transporter AFR_RS26605 PF02687 FtsX-like permease family AFR_RS26605 PF12704 MacB-like periplasmic core domain AFR_RS26605 PF00005 ABC transporter AFR_RS26665 PF00156 Phosphoribosyl transferase domain AFR_RS26670 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS26680 PF01810 LysE type translocator AFR_RS26695 PF00072 Response regulator receiver domain AFR_RS26695 PF00196 Bacterial regulatory proteins, luxR family AFR_RS26700 PF02574 Homocysteine S-methyltransferase AFR_RS26700 PF00809 Pterin binding enzyme AFR_RS26700 PF02607 B12 binding domain AFR_RS26700 PF02310 B12 binding domain AFR_RS26700 PF02965 Vitamin B12 dependent methionine synthase, activation domain AFR_RS26725 PF00005 ABC transporter AFR_RS26750 PF01047 MarR family AFR_RS26755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFR_RS26760 PF01406 tRNA synthetases class I (C) catalytic domain AFR_RS26775 PF00106 short chain dehydrogenase AFR_RS26775 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS26780 PF00296 Luciferase-like monooxygenase AFR_RS26785 PF00248 Aldo/keto reductase family AFR_RS26810 PF07687 Peptidase dimerisation domain AFR_RS26810 PF01546 Peptidase family M20/M25/M40 AFR_RS26820 PF03466 LysR substrate binding domain AFR_RS26820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS26825 PF07724 AAA domain (Cdc48 subfamily) AFR_RS26825 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS26825 PF10431 C-terminal, D2-small domain, of ClpB protein AFR_RS26825 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS26825 PF17871 AAA lid domain AFR_RS26840 PF01580 FtsK/SpoIIIE family AFR_RS26840 PF12538 DNA transporter AFR_RS26885 PF00486 Transcriptional regulatory protein, C terminal AFR_RS26885 PF00072 Response regulator receiver domain AFR_RS26895 PF12796 Ankyrin repeats (3 copies) AFR_RS26895 PF00023 Ankyrin repeat AFR_RS26905 PF07516 SecA Wing and Scaffold domain AFR_RS26905 PF07517 SecA DEAD-like domain AFR_RS26905 PF01043 SecA preprotein cross-linking domain AFR_RS26910 PF00664 ABC transporter transmembrane region AFR_RS26910 PF00005 ABC transporter AFR_RS26920 PF00072 Response regulator receiver domain AFR_RS26920 PF01339 CheB methylesterase AFR_RS26925 PF08448 PAS fold AFR_RS26925 PF01339 CheB methylesterase AFR_RS26925 PF03705 CheR methyltransferase, all-alpha domain AFR_RS26925 PF01739 CheR methyltransferase, SAM binding domain AFR_RS26935 PF04539 Sigma-70 region 3 AFR_RS26935 PF04542 Sigma-70 region 2 AFR_RS26935 PF04545 Sigma-70, region 4 AFR_RS26970 PF00561 alpha/beta hydrolase fold AFR_RS27005 PF00196 Bacterial regulatory proteins, luxR family AFR_RS27005 PF00072 Response regulator receiver domain AFR_RS27010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS27010 PF07730 Histidine kinase AFR_RS27045 PF07685 CobB/CobQ-like glutamine amidotransferase domain AFR_RS27045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFR_RS27055 PF17863 AAA lid domain AFR_RS27055 PF07728 AAA domain (dynein-related subfamily) AFR_RS27055 PF13519 von Willebrand factor type A domain AFR_RS27060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS27060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS27070 PF04545 Sigma-70, region 4 AFR_RS27070 PF04542 Sigma-70 region 2 AFR_RS27070 PF04539 Sigma-70 region 3 AFR_RS27080 PF01022 Bacterial regulatory protein, arsR family AFR_RS27085 PF03033 Glycosyltransferase family 28 N-terminal domain AFR_RS27085 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AFR_RS27090 PF00285 Citrate synthase, C-terminal domain AFR_RS27100 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS27100 PF13426 PAS domain AFR_RS27100 PF00563 EAL domain AFR_RS27105 PF03372 Endonuclease/Exonuclease/phosphatase family AFR_RS27140 PF03707 Bacterial signalling protein N terminal repeat AFR_RS27140 PF00563 EAL domain AFR_RS27140 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS27140 PF13188 PAS domain AFR_RS27145 PF00270 DEAD/DEAH box helicase AFR_RS27145 PF11898 Domain of unknown function (DUF3418) AFR_RS27145 PF04408 Helicase associated domain (HA2) AFR_RS27145 PF00271 Helicase conserved C-terminal domain AFR_RS27145 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AFR_RS27150 PF00248 Aldo/keto reductase family AFR_RS27155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS27155 PF00072 Response regulator receiver domain AFR_RS27155 PF01627 Hpt domain AFR_RS27155 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS27160 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS27160 PF00672 HAMP domain AFR_RS27160 PF00989 PAS fold AFR_RS27160 PF18698 Histidine kinase sensor domain AFR_RS27160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS27165 PF10135 Rod binding protein AFR_RS27165 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AFR_RS27180 PF04539 Sigma-70 region 3 AFR_RS27180 PF04542 Sigma-70 region 2 AFR_RS27180 PF04545 Sigma-70, region 4 AFR_RS27190 PF00480 ROK family AFR_RS27205 PF04542 Sigma-70 region 2 AFR_RS27205 PF04545 Sigma-70, region 4 AFR_RS27220 PF11896 Domain of unknown function (DUF3416) AFR_RS27220 PF00128 Alpha amylase, catalytic domain AFR_RS27225 PF00128 Alpha amylase, catalytic domain AFR_RS27225 PF16657 Maltogenic Amylase, C-terminal domain AFR_RS27230 PF18085 Maltokinase N-terminal cap domain AFR_RS27235 PF00128 Alpha amylase, catalytic domain AFR_RS27235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFR_RS27235 PF02806 Alpha amylase, C-terminal all-beta domain AFR_RS27240 PF00583 Acetyltransferase (GNAT) family AFR_RS27260 PF13302 Acetyltransferase (GNAT) domain AFR_RS27275 PF00196 Bacterial regulatory proteins, luxR family AFR_RS27280 PF00107 Zinc-binding dehydrogenase AFR_RS27280 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS27280 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS27285 PF17674 HHH domain AFR_RS27285 PF00575 S1 RNA binding domain AFR_RS27285 PF09371 Tex-like protein N-terminal domain AFR_RS27285 PF16921 Tex protein YqgF-like domain AFR_RS27290 PF00069 Protein kinase domain AFR_RS27290 PF00400 WD domain, G-beta repeat AFR_RS27295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS27295 PF03466 LysR substrate binding domain AFR_RS27315 PF12804 MobA-like NTP transferase domain AFR_RS27325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFR_RS27325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFR_RS27330 PF01799 [2Fe-2S] binding domain AFR_RS27330 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS27335 PF00941 FAD binding domain in molybdopterin dehydrogenase AFR_RS27335 PF03450 CO dehydrogenase flavoprotein C-terminal domain AFR_RS27340 PF00196 Bacterial regulatory proteins, luxR family AFR_RS27340 PF00072 Response regulator receiver domain AFR_RS27345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS27345 PF07730 Histidine kinase AFR_RS27370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFR_RS27370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFR_RS27370 PF10531 SLBB domain AFR_RS27415 PF13847 Methyltransferase domain AFR_RS27415 PF03551 Transcriptional regulator PadR-like family AFR_RS27420 PF00553 Cellulose binding domain AFR_RS27420 PF00041 Fibronectin type III domain AFR_RS27420 PF01341 Glycosyl hydrolases family 6 AFR_RS27445 PF02837 Glycosyl hydrolases family 2, sugar binding domain AFR_RS27445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AFR_RS27445 PF00703 Glycosyl hydrolases family 2 AFR_RS27460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS27460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS27460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS27465 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS27465 PF00563 EAL domain AFR_RS27465 PF03707 Bacterial signalling protein N terminal repeat AFR_RS27470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFR_RS27470 PF00356 Bacterial regulatory proteins, lacI family AFR_RS27480 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS27485 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS27495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS27495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS27515 PF00144 Beta-lactamase AFR_RS27520 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS27520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS27520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS27525 PF02091 Glycyl-tRNA synthetase alpha subunit AFR_RS27525 PF02092 Glycyl-tRNA synthetase beta subunit AFR_RS27535 PF01494 FAD binding domain AFR_RS27550 PF03009 Glycerophosphoryl diester phosphodiesterase family AFR_RS27555 PF00196 Bacterial regulatory proteins, luxR family AFR_RS27555 PF00072 Response regulator receiver domain AFR_RS27560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS27560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS27565 PF09339 IclR helix-turn-helix domain AFR_RS27565 PF01614 Bacterial transcriptional regulator AFR_RS27570 PF00230 Major intrinsic protein AFR_RS27575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFR_RS27575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFR_RS27580 PF01266 FAD dependent oxidoreductase AFR_RS27580 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AFR_RS27600 PF00440 Bacterial regulatory proteins, tetR family AFR_RS27610 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS27635 PF00149 Calcineurin-like phosphoesterase AFR_RS27650 PF01384 Phosphate transporter family AFR_RS27655 PF00202 Aminotransferase class-III AFR_RS27660 PF00155 Aminotransferase class I and II AFR_RS27660 PF00392 Bacterial regulatory proteins, gntR family AFR_RS27665 PF00795 Carbon-nitrogen hydrolase AFR_RS27670 PF01979 Amidohydrolase family AFR_RS27675 PF00171 Aldehyde dehydrogenase family AFR_RS27680 PF00296 Luciferase-like monooxygenase AFR_RS27685 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS27690 PF00005 ABC transporter AFR_RS27695 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS27700 PF09084 NMT1/THI5 like AFR_RS27725 PF00563 EAL domain AFR_RS27725 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS27725 PF01590 GAF domain AFR_RS27725 PF00360 Phytochrome region AFR_RS27740 PF00480 ROK family AFR_RS27740 PF01047 MarR family AFR_RS27745 PF13407 Periplasmic binding protein domain AFR_RS27750 PF02653 Branched-chain amino acid transport system / permease component AFR_RS27755 PF00005 ABC transporter AFR_RS27760 PF03176 MMPL family AFR_RS27775 PF00005 ABC transporter AFR_RS27775 PF00664 ABC transporter transmembrane region AFR_RS27780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS27780 PF16736 Single Cache-like AFR_RS27780 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS27780 PF00989 PAS fold AFR_RS27785 PF00486 Transcriptional regulatory protein, C terminal AFR_RS27785 PF00072 Response regulator receiver domain AFR_RS27800 PF12704 MacB-like periplasmic core domain AFR_RS27800 PF02687 FtsX-like permease family AFR_RS27800 PF00005 ABC transporter AFR_RS27805 PF12704 MacB-like periplasmic core domain AFR_RS27805 PF02687 FtsX-like permease family AFR_RS27805 PF00005 ABC transporter AFR_RS27810 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS27840 PF16177 Acetyl-coenzyme A synthetase N-terminus AFR_RS27840 PF13193 AMP-binding enzyme C-terminal domain AFR_RS27840 PF00501 AMP-binding enzyme AFR_RS27845 PF02806 Alpha amylase, C-terminal all-beta domain AFR_RS27845 PF03714 Bacterial pullanase-associated domain AFR_RS27845 PF00128 Alpha amylase, catalytic domain AFR_RS27850 PF00128 Alpha amylase, catalytic domain AFR_RS27860 PF04954 Siderophore-interacting protein AFR_RS27860 PF08021 Siderophore-interacting FAD-binding domain AFR_RS27870 PF14759 Reductase C-terminal AFR_RS27870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS27880 PF00890 FAD binding domain AFR_RS27890 PF01568 Molydopterin dinucleotide binding domain AFR_RS27890 PF00384 Molybdopterin oxidoreductase AFR_RS27895 PF00171 Aldehyde dehydrogenase family AFR_RS27900 PF00202 Aminotransferase class-III AFR_RS27910 PF01037 Lrp/AsnC ligand binding domain AFR_RS27915 PF00202 Aminotransferase class-III AFR_RS27920 PF01266 FAD dependent oxidoreductase AFR_RS27935 PF00069 Protein kinase domain AFR_RS27945 PF00392 Bacterial regulatory proteins, gntR family AFR_RS27980 PF00561 alpha/beta hydrolase fold AFR_RS27985 PF13302 Acetyltransferase (GNAT) domain AFR_RS27990 PF13439 Glycosyltransferase Family 4 AFR_RS28010 PF02515 CoA-transferase family III AFR_RS28030 PF00144 Beta-lactamase AFR_RS28050 PF00069 Protein kinase domain AFR_RS28055 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS28065 PF09107 Elongation factor SelB, winged helix AFR_RS28065 PF09106 Elongation factor SelB, winged helix AFR_RS28065 PF09105 Elongation factor SelB, winged helix AFR_RS28065 PF03144 Elongation factor Tu domain 2 AFR_RS28065 PF00009 Elongation factor Tu GTP binding domain AFR_RS28070 PF12390 Selenocysteine synthase N terminal AFR_RS28070 PF03841 L-seryl-tRNA selenium transferase AFR_RS28080 PF00586 AIR synthase related protein, N-terminal domain AFR_RS28080 PF02769 AIR synthase related protein, C-terminal domain AFR_RS28090 PF09163 Formate dehydrogenase N, transmembrane AFR_RS28090 PF13247 4Fe-4S dicluster domain AFR_RS28095 PF01568 Molydopterin dinucleotide binding domain AFR_RS28095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFR_RS28095 PF00384 Molybdopterin oxidoreductase AFR_RS28100 PF00384 Molybdopterin oxidoreductase AFR_RS28100 PF01568 Molydopterin dinucleotide binding domain AFR_RS28100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFR_RS28115 PF13193 AMP-binding enzyme C-terminal domain AFR_RS28115 PF00501 AMP-binding enzyme AFR_RS28130 PF00067 Cytochrome P450 AFR_RS28140 PF04471 Restriction endonuclease AFR_RS28140 PF14338 Mrr N-terminal domain AFR_RS28145 PF01494 FAD binding domain AFR_RS28160 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS28160 PF03707 Bacterial signalling protein N terminal repeat AFR_RS28160 PF00563 EAL domain AFR_RS28170 PF03176 MMPL family AFR_RS28190 PF00144 Beta-lactamase AFR_RS28245 PF01119 DNA mismatch repair protein, C-terminal domain AFR_RS28245 PF08676 MutL C terminal dimerisation domain AFR_RS28270 PF00563 EAL domain AFR_RS28270 PF13185 GAF domain AFR_RS28270 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS28305 PF05656 Protein of unknown function (DUF805) AFR_RS28330 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS28330 PF17863 AAA lid domain AFR_RS28340 PF08521 Two-component sensor kinase N-terminal AFR_RS28340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS28340 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS28345 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28345 PF00072 Response regulator receiver domain AFR_RS28350 PF03704 Bacterial transcriptional activator domain AFR_RS28350 PF00931 NB-ARC domain AFR_RS28350 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28355 PF00196 Bacterial regulatory proteins, luxR family AFR_RS28360 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28360 PF00072 Response regulator receiver domain AFR_RS28365 PF01638 HxlR-like helix-turn-helix AFR_RS28385 PF00041 Fibronectin type III domain AFR_RS28385 PF00759 Glycosyl hydrolase family 9 AFR_RS28385 PF00942 Cellulose binding domain AFR_RS28385 PF00553 Cellulose binding domain AFR_RS28390 PF12680 SnoaL-like domain AFR_RS28390 PF04542 Sigma-70 region 2 AFR_RS28390 PF08281 Sigma-70, region 4 AFR_RS28400 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AFR_RS28440 PF00535 Glycosyl transferase family 2 AFR_RS28440 PF07238 PilZ domain AFR_RS28440 PF03552 Cellulose synthase AFR_RS28455 PF00583 Acetyltransferase (GNAT) family AFR_RS28455 PF13673 Acetyltransferase (GNAT) domain AFR_RS28465 PF00196 Bacterial regulatory proteins, luxR family AFR_RS28485 PF00171 Aldehyde dehydrogenase family AFR_RS28490 PF00067 Cytochrome P450 AFR_RS28500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS28500 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS28500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS28510 PF01039 Carboxyl transferase domain AFR_RS28515 PF00289 Biotin carboxylase, N-terminal domain AFR_RS28515 PF02785 Biotin carboxylase C-terminal domain AFR_RS28515 PF00364 Biotin-requiring enzyme AFR_RS28515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS28540 PF12706 Beta-lactamase superfamily domain AFR_RS28555 PF00884 Sulfatase AFR_RS28555 PF16347 Domain of unknown function (DUF4976) AFR_RS28600 PF08281 Sigma-70, region 4 AFR_RS28600 PF12680 SnoaL-like domain AFR_RS28600 PF04542 Sigma-70 region 2 AFR_RS28605 PF00563 EAL domain AFR_RS28605 PF01590 GAF domain AFR_RS28605 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS28605 PF00360 Phytochrome region AFR_RS28610 PF10566 Glycoside hydrolase 97 AFR_RS28610 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AFR_RS28610 PF14508 Glycosyl-hydrolase 97 N-terminal AFR_RS28615 PF07995 Glucose / Sorbosone dehydrogenase AFR_RS28625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS28625 PF00672 HAMP domain AFR_RS28625 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS28630 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28630 PF00072 Response regulator receiver domain AFR_RS28650 PF01872 RibD C-terminal domain AFR_RS28655 PF00881 Nitroreductase family AFR_RS28665 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS28665 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS28665 PF08659 KR domain AFR_RS28665 PF14765 Polyketide synthase dehydratase AFR_RS28665 PF00107 Zinc-binding dehydrogenase AFR_RS28665 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS28665 PF00698 Acyl transferase domain AFR_RS28665 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS28665 PF00550 Phosphopantetheine attachment site AFR_RS28675 PF14525 AraC-binding-like domain AFR_RS28675 PF12833 Helix-turn-helix domain AFR_RS28695 PF13298 DNA polymerase Ligase (LigD) AFR_RS28695 PF01068 ATP dependent DNA ligase domain AFR_RS28695 PF04679 ATP dependent DNA ligase C terminal region AFR_RS28700 PF13977 BetI-type transcriptional repressor, C-terminal AFR_RS28700 PF00440 Bacterial regulatory proteins, tetR family AFR_RS28705 PF12146 Serine aminopeptidase, S33 AFR_RS28720 PF12704 MacB-like periplasmic core domain AFR_RS28720 PF02687 FtsX-like permease family AFR_RS28725 PF12704 MacB-like periplasmic core domain AFR_RS28725 PF02687 FtsX-like permease family AFR_RS28725 PF00005 ABC transporter AFR_RS28735 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28735 PF00072 Response regulator receiver domain AFR_RS28740 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS28740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS28740 PF00672 HAMP domain AFR_RS28745 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS28745 PF00672 HAMP domain AFR_RS28745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS28750 PF00486 Transcriptional regulatory protein, C terminal AFR_RS28750 PF00072 Response regulator receiver domain AFR_RS28760 PF00535 Glycosyl transferase family 2 AFR_RS28785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFR_RS28795 PF00561 alpha/beta hydrolase fold AFR_RS28820 PF00149 Calcineurin-like phosphoesterase AFR_RS28830 PF00072 Response regulator receiver domain AFR_RS28830 PF13188 PAS domain AFR_RS28830 PF08448 PAS fold AFR_RS28830 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS28830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS28835 PF00149 Calcineurin-like phosphoesterase AFR_RS28870 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS28870 PF13823 Alcohol dehydrogenase GroES-associated AFR_RS28870 PF00107 Zinc-binding dehydrogenase AFR_RS28885 PF00083 Sugar (and other) transporter AFR_RS28890 PF01757 Acyltransferase family AFR_RS28895 PF00196 Bacterial regulatory proteins, luxR family AFR_RS28895 PF00072 Response regulator receiver domain AFR_RS28905 PF00069 Protein kinase domain AFR_RS28925 PF00072 Response regulator receiver domain AFR_RS28925 PF00196 Bacterial regulatory proteins, luxR family AFR_RS28930 PF00561 alpha/beta hydrolase fold AFR_RS28940 PF00005 ABC transporter AFR_RS28950 PF07730 Histidine kinase AFR_RS28955 PF00072 Response regulator receiver domain AFR_RS28955 PF00196 Bacterial regulatory proteins, luxR family AFR_RS28990 PF00561 alpha/beta hydrolase fold AFR_RS28995 PF00005 ABC transporter AFR_RS29005 PF00107 Zinc-binding dehydrogenase AFR_RS29005 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS29015 PF12146 Serine aminopeptidase, S33 AFR_RS29035 PF00440 Bacterial regulatory proteins, tetR family AFR_RS29045 PF00072 Response regulator receiver domain AFR_RS29045 PF00196 Bacterial regulatory proteins, luxR family AFR_RS29060 PF00561 alpha/beta hydrolase fold AFR_RS29075 PF07730 Histidine kinase AFR_RS29075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS29080 PF00196 Bacterial regulatory proteins, luxR family AFR_RS29080 PF00072 Response regulator receiver domain AFR_RS29085 PF00072 Response regulator receiver domain AFR_RS29085 PF00196 Bacterial regulatory proteins, luxR family AFR_RS29090 PF00561 alpha/beta hydrolase fold AFR_RS29095 PF00561 alpha/beta hydrolase fold AFR_RS29110 PF00561 alpha/beta hydrolase fold AFR_RS29120 PF00106 short chain dehydrogenase AFR_RS29125 PF01209 ubiE/COQ5 methyltransferase family AFR_RS29130 PF00561 alpha/beta hydrolase fold AFR_RS29170 PF09335 SNARE associated Golgi protein AFR_RS29185 PF00069 Protein kinase domain AFR_RS29185 PF00400 WD domain, G-beta repeat AFR_RS29200 PF08543 Phosphomethylpyrimidine kinase AFR_RS29205 PF07729 FCD domain AFR_RS29205 PF00392 Bacterial regulatory proteins, gntR family AFR_RS29210 PF00248 Aldo/keto reductase family AFR_RS29215 PF04909 Amidohydrolase AFR_RS29220 PF05336 L-rhamnose mutarotase AFR_RS29225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFR_RS29225 PF13378 Enolase C-terminal domain-like AFR_RS29230 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS29235 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS29245 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS29245 PF00107 Zinc-binding dehydrogenase AFR_RS29255 PF01638 HxlR-like helix-turn-helix AFR_RS29260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS29260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS29275 PF12852 Cupin AFR_RS29275 PF12833 Helix-turn-helix domain AFR_RS29280 PF00331 Glycosyl hydrolase family 10 AFR_RS29280 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS29285 PF16499 Alpha galactosidase A AFR_RS29285 PF17801 Alpha galactosidase C-terminal beta sandwich domain AFR_RS29290 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS29290 PF00331 Glycosyl hydrolase family 10 AFR_RS29300 PF00331 Glycosyl hydrolase family 10 AFR_RS29300 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS29305 PF04616 Glycosyl hydrolases family 43 AFR_RS29305 PF03422 Carbohydrate binding module (family 6) AFR_RS29315 PF00331 Glycosyl hydrolase family 10 AFR_RS29315 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS29320 PF00457 Glycosyl hydrolases family 11 AFR_RS29320 PF03422 Carbohydrate binding module (family 6) AFR_RS29340 PF00005 ABC transporter AFR_RS29340 PF00664 ABC transporter transmembrane region AFR_RS29350 PF03621 MbtH-like protein AFR_RS29355 PF00501 AMP-binding enzyme AFR_RS29355 PF13193 AMP-binding enzyme C-terminal domain AFR_RS29355 PF00668 Condensation domain AFR_RS29355 PF00550 Phosphopantetheine attachment site AFR_RS29355 PF00975 Thioesterase domain AFR_RS29360 PF12706 Beta-lactamase superfamily domain AFR_RS29370 PF12695 Alpha/beta hydrolase family AFR_RS29385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS29385 PF03466 LysR substrate binding domain AFR_RS29395 PF00106 short chain dehydrogenase AFR_RS29400 PF03949 Malic enzyme, NAD binding domain AFR_RS29400 PF00390 Malic enzyme, N-terminal domain AFR_RS29405 PF10415 Fumarase C C-terminus AFR_RS29405 PF00206 Lyase AFR_RS29415 PF01425 Amidase AFR_RS29420 PF13460 NAD(P)H-binding AFR_RS29435 PF00561 alpha/beta hydrolase fold AFR_RS29440 PF02311 AraC-like ligand binding domain AFR_RS29440 PF12833 Helix-turn-helix domain AFR_RS29465 PF00440 Bacterial regulatory proteins, tetR family AFR_RS29475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AFR_RS29475 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AFR_RS29490 PF01494 FAD binding domain AFR_RS29495 PF12323 Helix-turn-helix domain AFR_RS29495 PF07282 Putative transposase DNA-binding domain AFR_RS29495 PF01385 Probable transposase AFR_RS29525 PF00005 ABC transporter AFR_RS29525 PF12704 MacB-like periplasmic core domain AFR_RS29525 PF02687 FtsX-like permease family AFR_RS29530 PF00005 ABC transporter AFR_RS29540 PF00072 Response regulator receiver domain AFR_RS29540 PF00486 Transcriptional regulatory protein, C terminal AFR_RS29545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS29545 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS29545 PF00989 PAS fold AFR_RS29545 PF16736 Single Cache-like AFR_RS29555 PF00175 Oxidoreductase NAD-binding domain AFR_RS29555 PF00970 Oxidoreductase FAD-binding domain AFR_RS29555 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS29570 PF00486 Transcriptional regulatory protein, C terminal AFR_RS29570 PF00931 NB-ARC domain AFR_RS29570 PF03704 Bacterial transcriptional activator domain AFR_RS29575 PF01565 FAD binding domain AFR_RS29575 PF08031 Berberine and berberine like AFR_RS29585 PF01047 MarR family AFR_RS29600 PF02678 Pirin AFR_RS29600 PF05726 Pirin C-terminal cupin domain AFR_RS29620 PF05977 Transmembrane secretion effector AFR_RS29625 PF07859 alpha/beta hydrolase fold AFR_RS29685 PF13086 AAA domain AFR_RS29685 PF13195 Protein of unknown function (DUF4011) AFR_RS29685 PF13087 AAA domain AFR_RS29695 PF08494 DEAD/H associated AFR_RS29695 PF00271 Helicase conserved C-terminal domain AFR_RS29695 PF00270 DEAD/DEAH box helicase AFR_RS29745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AFR_RS29745 PF01926 50S ribosome-binding GTPase AFR_RS29750 PF02224 Cytidylate kinase AFR_RS29755 PF00849 RNA pseudouridylate synthase AFR_RS29755 PF01479 S4 domain AFR_RS29760 PF04079 Segregation and condensation complex subunit ScpB AFR_RS29770 PF02616 Segregation and condensation protein ScpA AFR_RS29775 PF01636 Phosphotransferase enzyme family AFR_RS29780 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS29800 PF13344 Haloacid dehalogenase-like hydrolase AFR_RS29800 PF00293 NUDIX domain AFR_RS29805 PF01063 Amino-transferase class IV AFR_RS29860 PF09594 Glycosyltransferase family 87 AFR_RS29870 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS29870 PF00107 Zinc-binding dehydrogenase AFR_RS29890 PF13460 NAD(P)H-binding AFR_RS29900 PF01047 MarR family AFR_RS29910 PF06029 AlkA N-terminal domain AFR_RS29910 PF02805 Metal binding domain of Ada AFR_RS29910 PF12833 Helix-turn-helix domain AFR_RS29910 PF00730 HhH-GPD superfamily base excision DNA repair protein AFR_RS29920 PF01467 Cytidylyltransferase-like AFR_RS29995 PF13614 AAA domain AFR_RS30000 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS30000 PF00589 Phage integrase family AFR_RS30005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AFR_RS30005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AFR_RS30010 PF07282 Putative transposase DNA-binding domain AFR_RS30010 PF01385 Probable transposase AFR_RS30010 PF12323 Helix-turn-helix domain AFR_RS30015 PF00296 Luciferase-like monooxygenase AFR_RS30020 PF00293 NUDIX domain AFR_RS30025 PF06418 CTP synthase N-terminus AFR_RS30025 PF00117 Glutamine amidotransferase class-I AFR_RS30035 PF13439 Glycosyltransferase Family 4 AFR_RS30035 PF00534 Glycosyl transferases group 1 AFR_RS30050 PF11382 Copper transport outer membrane protein, MctB AFR_RS30060 PF01385 Probable transposase AFR_RS30060 PF12323 Helix-turn-helix domain AFR_RS30060 PF07282 Putative transposase DNA-binding domain AFR_RS30065 PF02463 RecF/RecN/SMC N terminal domain AFR_RS30070 PF01513 ATP-NAD kinase AFR_RS30075 PF01479 S4 domain AFR_RS30075 PF01728 FtsJ-like methyltransferase AFR_RS30095 PF00005 ABC transporter AFR_RS30115 PF00196 Bacterial regulatory proteins, luxR family AFR_RS30115 PF00072 Response regulator receiver domain AFR_RS30120 PF18407 GCN5-related N-acetyltransferase like domain AFR_RS30120 PF13344 Haloacid dehalogenase-like hydrolase AFR_RS30150 PF00579 tRNA synthetases class I (W and Y) AFR_RS30165 PF03976 Polyphosphate kinase 2 (PPK2) AFR_RS30170 PF05191 Adenylate kinase, active site lid AFR_RS30205 PF02245 Methylpurine-DNA glycosylase (MPG) AFR_RS30220 PF17678 Glycosyl hydrolase family 92 N-terminal domain AFR_RS30220 PF07971 Glycosyl hydrolase family 92 AFR_RS30230 PF01256 Carbohydrate kinase AFR_RS30235 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS30250 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS30255 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS30260 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AFR_RS30265 PF02080 TrkA-C domain AFR_RS30270 PF07730 Histidine kinase AFR_RS30270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS30270 PF05231 MASE1 AFR_RS30275 PF00196 Bacterial regulatory proteins, luxR family AFR_RS30275 PF00072 Response regulator receiver domain AFR_RS30280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFR_RS30280 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AFR_RS30280 PF13244 Domain of unknown function (DUF4040) AFR_RS30280 PF00361 Proton-conducting membrane transporter AFR_RS30285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFR_RS30290 PF00361 Proton-conducting membrane transporter AFR_RS30300 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AFR_RS30305 PF03334 Na+/H+ antiporter subunit AFR_RS30310 PF00149 Calcineurin-like phosphoesterase AFR_RS30330 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS30340 PF01925 Sulfite exporter TauE/SafE AFR_RS30350 PF13614 AAA domain AFR_RS30355 PF14698 Argininosuccinate lyase C-terminal AFR_RS30355 PF00206 Lyase AFR_RS30360 PF00764 Arginosuccinate synthase AFR_RS30370 PF02863 Arginine repressor, C-terminal domain AFR_RS30370 PF01316 Arginine repressor, DNA binding domain AFR_RS30375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFR_RS30375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFR_RS30380 PF00202 Aminotransferase class-III AFR_RS30385 PF00696 Amino acid kinase family AFR_RS30390 PF01960 ArgJ family AFR_RS30395 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFR_RS30395 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFR_RS30435 PF17754 MftR C-terminal domain AFR_RS30435 PF00440 Bacterial regulatory proteins, tetR family AFR_RS30440 PF00067 Cytochrome P450 AFR_RS30455 PF00005 ABC transporter AFR_RS30460 PF07730 Histidine kinase AFR_RS30465 PF00196 Bacterial regulatory proteins, luxR family AFR_RS30465 PF00072 Response regulator receiver domain AFR_RS30475 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS30475 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS30475 PF14310 Fibronectin type III-like domain AFR_RS30490 PF00365 Phosphofructokinase AFR_RS30505 PF12704 MacB-like periplasmic core domain AFR_RS30505 PF00005 ABC transporter AFR_RS30505 PF02687 FtsX-like permease family AFR_RS30535 PF00392 Bacterial regulatory proteins, gntR family AFR_RS30540 PF00005 ABC transporter AFR_RS30540 PF13732 Domain of unknown function (DUF4162) AFR_RS30560 PF04151 Bacterial pre-peptidase C-terminal domain AFR_RS30560 PF04389 Peptidase family M28 AFR_RS30565 PF13649 Methyltransferase domain AFR_RS30575 PF04978 Protein of unknown function (DUF664) AFR_RS30590 PF01588 Putative tRNA binding domain AFR_RS30590 PF03483 B3/4 domain AFR_RS30590 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AFR_RS30590 PF03484 tRNA synthetase B5 domain AFR_RS30590 PF03147 Ferredoxin-fold anticodon binding domain AFR_RS30595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AFR_RS30595 PF01409 tRNA synthetases class II core domain (F) AFR_RS30600 PF00588 SpoU rRNA Methylase family AFR_RS30600 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFR_RS30605 PF00453 Ribosomal protein L20 AFR_RS30610 PF01632 Ribosomal protein L35 AFR_RS30615 PF05198 Translation initiation factor IF-3, N-terminal domain AFR_RS30615 PF00707 Translation initiation factor IF-3, C-terminal domain AFR_RS30625 PF01634 ATP phosphoribosyltransferase AFR_RS30625 PF08029 HisG, C-terminal domain AFR_RS30630 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AFR_RS30635 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFR_RS30640 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS30645 PF00005 ABC transporter AFR_RS30650 PF07995 Glucose / Sorbosone dehydrogenase AFR_RS30655 PF00885 6,7-dimethyl-8-ribityllumazine synthase AFR_RS30660 PF00925 GTP cyclohydrolase II AFR_RS30660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFR_RS30665 PF00677 Lumazine binding domain AFR_RS30670 PF01872 RibD C-terminal domain AFR_RS30670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFR_RS30675 PF00486 Transcriptional regulatory protein, C terminal AFR_RS30675 PF00072 Response regulator receiver domain AFR_RS30680 PF00834 Ribulose-phosphate 3 epimerase family AFR_RS30695 PF01189 16S rRNA methyltransferase RsmB/F AFR_RS30695 PF01029 NusB family AFR_RS30700 PF00551 Formyl transferase AFR_RS30700 PF02911 Formyl transferase, C-terminal domain AFR_RS30705 PF01327 Polypeptide deformylase AFR_RS30710 PF00067 Cytochrome P450 AFR_RS30720 PF17764 3′ DNA-binding domain (3′BD) AFR_RS30725 PF02772 S-adenosylmethionine synthetase, central domain AFR_RS30725 PF00438 S-adenosylmethionine synthetase, N-terminal domain AFR_RS30725 PF02773 S-adenosylmethionine synthetase, C-terminal domain AFR_RS30730 PF04127 DNA / pantothenate metabolism flavoprotein AFR_RS30730 PF02441 Flavoprotein AFR_RS30735 PF01192 RNA polymerase Rpb6 AFR_RS30740 PF00625 Guanylate kinase AFR_RS30745 PF00416 Ribosomal protein S13/S18 AFR_RS30750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AFR_RS30755 PF00202 Aminotransferase class-III AFR_RS30760 PF01180 Dihydroorotate dehydrogenase AFR_RS30765 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFR_RS30765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS30765 PF02142 MGS-like domain AFR_RS30770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AFR_RS30770 PF00117 Glutamine amidotransferase class-I AFR_RS30775 PF01979 Amidohydrolase family AFR_RS30780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFR_RS30780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFR_RS30785 PF00156 Phosphoribosyl transferase domain AFR_RS30795 PF01029 NusB family AFR_RS30800 PF09285 Elongation factor P, C-terminal AFR_RS30800 PF08207 Elongation factor P (EF-P) KOW-like domain AFR_RS30800 PF01132 Elongation factor P (EF-P) OB domain AFR_RS30805 PF01220 Dehydroquinase class II AFR_RS30810 PF01761 3-dehydroquinate synthase AFR_RS30815 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS30830 PF01202 Shikimate kinase AFR_RS30835 PF01264 Chorismate synthase AFR_RS30840 PF07690 Major Facilitator Superfamily AFR_RS30845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AFR_RS30845 PF08501 Shikimate dehydrogenase substrate binding domain AFR_RS30845 PF01488 Shikimate / quinate 5-dehydrogenase AFR_RS30850 PF02618 YceG-like family AFR_RS30855 PF03652 Holliday junction resolvase AFR_RS30860 PF02272 DHHA1 domain AFR_RS30860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFR_RS30860 PF01411 tRNA synthetases class II (A) AFR_RS30890 PF12002 MgsA AAA+ ATPase C terminal AFR_RS30890 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS30890 PF16193 AAA C-terminal domain AFR_RS30925 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS30925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS30925 PF00672 HAMP domain AFR_RS30930 PF00486 Transcriptional regulatory protein, C terminal AFR_RS30930 PF00072 Response regulator receiver domain AFR_RS30935 PF00005 ABC transporter AFR_RS30955 PF00152 tRNA synthetases class II (D, K and N) AFR_RS30955 PF02938 GAD domain AFR_RS30955 PF01336 OB-fold nucleic acid binding domain AFR_RS30980 PF07690 Major Facilitator Superfamily AFR_RS31010 PF07691 PA14 domain AFR_RS31010 PF00728 Glycosyl hydrolase family 20, catalytic domain AFR_RS31010 PF02838 Glycosyl hydrolase family 20, domain 2 AFR_RS31015 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS31020 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS31040 PF01979 Amidohydrolase family AFR_RS31045 PF01042 Endoribonuclease L-PSP AFR_RS31055 PF00547 Urease, gamma subunit AFR_RS31060 PF00699 Urease beta subunit AFR_RS31065 PF00449 Urease alpha-subunit, N-terminal domain AFR_RS31065 PF01979 Amidohydrolase family AFR_RS31070 PF01730 UreF AFR_RS31075 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFR_RS31080 PF01774 UreD urease accessory protein AFR_RS31085 PF04545 Sigma-70, region 4 AFR_RS31085 PF04542 Sigma-70 region 2 AFR_RS31085 PF04539 Sigma-70 region 3 AFR_RS31095 PF00069 Protein kinase domain AFR_RS31100 PF02875 Mur ligase family, glutamate ligase domain AFR_RS31100 PF08245 Mur ligase middle domain AFR_RS31100 PF08443 RimK-like ATP-grasp domain AFR_RS31105 PF03575 Peptidase family S51 AFR_RS31110 PF05977 Transmembrane secretion effector AFR_RS31115 PF01638 HxlR-like helix-turn-helix AFR_RS31125 PF00005 ABC transporter AFR_RS31130 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFR_RS31130 PF00005 ABC transporter AFR_RS31155 PF00106 short chain dehydrogenase AFR_RS31160 PF00440 Bacterial regulatory proteins, tetR family AFR_RS31165 PF13393 Histidyl-tRNA synthetase AFR_RS31165 PF03129 Anticodon binding domain AFR_RS31170 PF00753 Metallo-beta-lactamase superfamily AFR_RS31180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFR_RS31185 PF13291 ACT domain AFR_RS31185 PF04607 Region found in RelA / SpoT proteins AFR_RS31185 PF02824 TGS domain AFR_RS31190 PF00156 Phosphoribosyl transferase domain AFR_RS31195 PF07549 SecD/SecF GG Motif AFR_RS31195 PF02355 Protein export membrane protein AFR_RS31200 PF02355 Protein export membrane protein AFR_RS31200 PF07549 SecD/SecF GG Motif AFR_RS31205 PF02699 Preprotein translocase subunit AFR_RS31210 PF17864 RuvB AAA lid domain AFR_RS31210 PF05491 RuvB C-terminal winged helix domain AFR_RS31210 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFR_RS31215 PF01330 RuvA N terminal domain AFR_RS31215 PF07499 RuvA, C-terminal domain AFR_RS31220 PF02075 Crossover junction endodeoxyribonuclease RuvC AFR_RS31230 PF01709 Transcriptional regulator AFR_RS31235 PF01174 SNO glutamine amidotransferase family AFR_RS31240 PF01680 SOR/SNZ family AFR_RS31245 PF01313 Bacterial export proteins, family 3 AFR_RS31255 PF13439 Glycosyltransferase Family 4 AFR_RS31260 PF03279 Bacterial lipid A biosynthesis acyltransferase AFR_RS31265 PF01066 CDP-alcohol phosphatidyltransferase AFR_RS31270 PF00009 Elongation factor Tu GTP binding domain AFR_RS31270 PF03764 Elongation factor G, domain IV AFR_RS31270 PF14492 Elongation Factor G, domain II AFR_RS31270 PF00679 Elongation factor G C-terminus AFR_RS31270 PF03144 Elongation factor Tu domain 2 AFR_RS31275 PF01494 FAD binding domain AFR_RS31285 PF00563 EAL domain AFR_RS31285 PF13426 PAS domain AFR_RS31285 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS31295 PF01230 HIT domain AFR_RS31305 PF04542 Sigma-70 region 2 AFR_RS31305 PF04545 Sigma-70, region 4 AFR_RS31305 PF04539 Sigma-70 region 3 AFR_RS31315 PF03129 Anticodon binding domain AFR_RS31315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS31315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFR_RS31325 PF00072 Response regulator receiver domain AFR_RS31325 PF00486 Transcriptional regulatory protein, C terminal AFR_RS31330 PF00672 HAMP domain AFR_RS31330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS31330 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS31340 PF00962 Adenosine/AMP deaminase AFR_RS31345 PF08241 Methyltransferase domain AFR_RS31350 PF00248 Aldo/keto reductase family AFR_RS31360 PF00313 'Cold-shock' DNA-binding domain AFR_RS31400 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFR_RS31400 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS31405 PF00296 Luciferase-like monooxygenase AFR_RS31410 PF00270 DEAD/DEAH box helicase AFR_RS31410 PF00271 Helicase conserved C-terminal domain AFR_RS31410 PF00570 HRDC domain AFR_RS31410 PF09382 RQC domain AFR_RS31410 PF16124 RecQ zinc-binding AFR_RS31440 PF00072 Response regulator receiver domain AFR_RS31440 PF00196 Bacterial regulatory proteins, luxR family AFR_RS31445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AFR_RS31445 PF07730 Histidine kinase AFR_RS31445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS31445 PF00672 HAMP domain AFR_RS31455 PF00005 ABC transporter AFR_RS31460 PF13439 Glycosyltransferase Family 4 AFR_RS31460 PF00534 Glycosyl transferases group 1 AFR_RS31470 PF00106 short chain dehydrogenase AFR_RS31480 PF03631 Virulence factor BrkB AFR_RS31485 PF03364 Polyketide cyclase / dehydrase and lipid transport AFR_RS31520 PF07228 Stage II sporulation protein E (SpoIIE) AFR_RS31520 PF13581 Histidine kinase-like ATPase domain AFR_RS31520 PF13466 STAS domain AFR_RS31520 PF08448 PAS fold AFR_RS31550 PF10431 C-terminal, D2-small domain, of ClpB protein AFR_RS31550 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS31550 PF07724 AAA domain (Cdc48 subfamily) AFR_RS31550 PF17871 AAA lid domain AFR_RS31550 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS31575 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS31590 PF02678 Pirin AFR_RS31590 PF05726 Pirin C-terminal cupin domain AFR_RS31595 PF13460 NAD(P)H-binding AFR_RS31615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS31615 PF05231 MASE1 AFR_RS31615 PF07730 Histidine kinase AFR_RS31620 PF00072 Response regulator receiver domain AFR_RS31620 PF00196 Bacterial regulatory proteins, luxR family AFR_RS31640 PF03561 Allantoicase repeat AFR_RS31645 PF01979 Amidohydrolase family AFR_RS31660 PF01274 Malate synthase AFR_RS31670 PF01979 Amidohydrolase family AFR_RS31675 PF01014 Uricase AFR_RS31680 PF00576 HIUase/Transthyretin family AFR_RS31690 PF00270 DEAD/DEAH box helicase AFR_RS31690 PF00271 Helicase conserved C-terminal domain AFR_RS31690 PF08482 ATP-dependent helicase C-terminal AFR_RS31690 PF04408 Helicase associated domain (HA2) AFR_RS31695 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS31695 PF00563 EAL domain AFR_RS31695 PF03707 Bacterial signalling protein N terminal repeat AFR_RS31715 PF01809 Putative membrane protein insertion efficiency factor AFR_RS31725 PF00128 Alpha amylase, catalytic domain AFR_RS31725 PF11941 Domain of unknown function (DUF3459) AFR_RS31730 PF00128 Alpha amylase, catalytic domain AFR_RS31735 PF00128 Alpha amylase, catalytic domain AFR_RS31735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFR_RS31745 PF00999 Sodium/hydrogen exchanger family AFR_RS31750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFR_RS31750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFR_RS31755 PF00535 Glycosyl transferase family 2 AFR_RS31760 PF00501 AMP-binding enzyme AFR_RS31760 PF13193 AMP-binding enzyme C-terminal domain AFR_RS31790 PF13188 PAS domain AFR_RS31790 PF03707 Bacterial signalling protein N terminal repeat AFR_RS31790 PF00563 EAL domain AFR_RS31790 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS31810 PF02203 Tar ligand binding domain homologue AFR_RS31810 PF00672 HAMP domain AFR_RS31810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS31815 PF01476 LysM domain AFR_RS31815 PF00756 Putative esterase AFR_RS31835 PF02390 Putative methyltransferase AFR_RS31840 PF00989 PAS fold AFR_RS31840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS31840 PF00672 HAMP domain AFR_RS31840 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS31845 PF05694 56kDa selenium binding protein (SBP56) AFR_RS31865 PF00664 ABC transporter transmembrane region AFR_RS31865 PF00005 ABC transporter AFR_RS31870 PF00664 ABC transporter transmembrane region AFR_RS31870 PF00005 ABC transporter AFR_RS31875 PF00561 alpha/beta hydrolase fold AFR_RS31880 PF00246 Zinc carboxypeptidase AFR_RS31885 PF07995 Glucose / Sorbosone dehydrogenase AFR_RS31905 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AFR_RS31905 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AFR_RS31910 PF10566 Glycoside hydrolase 97 AFR_RS31910 PF14508 Glycosyl-hydrolase 97 N-terminal AFR_RS31910 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AFR_RS31920 PF01494 FAD binding domain AFR_RS31925 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS31930 PF00296 Luciferase-like monooxygenase AFR_RS31935 PF00535 Glycosyl transferase family 2 AFR_RS31940 PF00296 Luciferase-like monooxygenase AFR_RS31950 PF13581 Histidine kinase-like ATPase domain AFR_RS31965 PF00296 Luciferase-like monooxygenase AFR_RS31980 PF00768 D-alanyl-D-alanine carboxypeptidase AFR_RS32000 PF04539 Sigma-70 region 3 AFR_RS32000 PF04545 Sigma-70, region 4 AFR_RS32000 PF04542 Sigma-70 region 2 AFR_RS32005 PF13538 UvrD-like helicase C-terminal domain AFR_RS32015 PF04545 Sigma-70, region 4 AFR_RS32015 PF04539 Sigma-70 region 3 AFR_RS32015 PF04542 Sigma-70 region 2 AFR_RS32020 PF00271 Helicase conserved C-terminal domain AFR_RS32020 PF00270 DEAD/DEAH box helicase AFR_RS32035 PF00196 Bacterial regulatory proteins, luxR family AFR_RS32035 PF00072 Response regulator receiver domain AFR_RS32065 PF02146 Sir2 family AFR_RS32070 PF00356 Bacterial regulatory proteins, lacI family AFR_RS32075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS32080 PF00005 ABC transporter AFR_RS32080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS32085 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS32090 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS32090 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS32095 PF00005 ABC transporter AFR_RS32095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS32100 PF00232 Glycosyl hydrolase family 1 AFR_RS32105 PF00480 ROK family AFR_RS32130 PF00248 Aldo/keto reductase family AFR_RS32165 PF00521 DNA gyrase/topoisomerase IV, subunit A AFR_RS32165 PF03989 DNA gyrase C-terminal domain, beta-propeller AFR_RS32170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS32170 PF00986 DNA gyrase B subunit, carboxyl terminus AFR_RS32170 PF00204 DNA gyrase B AFR_RS32170 PF01751 Toprim domain AFR_RS32175 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS32180 PF03793 PASTA domain AFR_RS32180 PF00069 Protein kinase domain AFR_RS32185 PF00211 Adenylate and Guanylate cyclase catalytic domain AFR_RS32185 PF00672 HAMP domain AFR_RS32190 PF00196 Bacterial regulatory proteins, luxR family AFR_RS32190 PF00072 Response regulator receiver domain AFR_RS32205 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS32205 PF00672 HAMP domain AFR_RS32205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS32210 PF00486 Transcriptional regulatory protein, C terminal AFR_RS32210 PF00072 Response regulator receiver domain AFR_RS32215 PF08281 Sigma-70, region 4 AFR_RS32215 PF04542 Sigma-70 region 2 AFR_RS32220 PF03795 YCII-related domain AFR_RS32260 PF00356 Bacterial regulatory proteins, lacI family AFR_RS32270 PF01699 Sodium/calcium exchanger protein AFR_RS32275 PF01494 FAD binding domain AFR_RS32290 PF00196 Bacterial regulatory proteins, luxR family AFR_RS32295 PF01842 ACT domain AFR_RS32295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS32295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS32310 PF13409 Glutathione S-transferase, N-terminal domain AFR_RS32320 PF01047 MarR family AFR_RS32340 PF00440 Bacterial regulatory proteins, tetR family AFR_RS32340 PF17926 Tetracyclin repressor-like, C-terminal domain AFR_RS32345 PF00106 short chain dehydrogenase AFR_RS32355 PF07728 AAA domain (dynein-related subfamily) AFR_RS32370 PF05762 VWA domain containing CoxE-like protein AFR_RS32375 PF02540 NAD synthase AFR_RS32375 PF00795 Carbon-nitrogen hydrolase AFR_RS32385 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AFR_RS32385 PF01648 4'-phosphopantetheinyl transferase superfamily AFR_RS32390 PF12697 Alpha/beta hydrolase family AFR_RS32395 PF02151 UvrB/uvrC motif AFR_RS32395 PF01541 GIY-YIG catalytic domain AFR_RS32395 PF08459 UvrC Helix-hairpin-helix N-terminal AFR_RS32405 PF04075 F420H(2)-dependent quinone reductase AFR_RS32410 PF04075 F420H(2)-dependent quinone reductase AFR_RS32420 PF00005 ABC transporter AFR_RS32425 PF01032 FecCD transport family AFR_RS32430 PF01032 FecCD transport family AFR_RS32475 PF00709 Adenylosuccinate synthetase AFR_RS32500 PF02156 Glycosyl hydrolase family 26 AFR_RS32500 PF03425 Carbohydrate binding domain (family 11) AFR_RS32525 PF08281 Sigma-70, region 4 AFR_RS32525 PF04542 Sigma-70 region 2 AFR_RS32535 PF00174 Oxidoreductase molybdopterin binding domain AFR_RS32540 PF00970 Oxidoreductase FAD-binding domain AFR_RS32540 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS32540 PF00175 Oxidoreductase NAD-binding domain AFR_RS32555 PF13472 GDSL-like Lipase/Acylhydrolase family AFR_RS32560 PF00106 short chain dehydrogenase AFR_RS32565 PF00440 Bacterial regulatory proteins, tetR family AFR_RS32580 PF00009 Elongation factor Tu GTP binding domain AFR_RS32580 PF03143 Elongation factor Tu C-terminal domain AFR_RS32580 PF03144 Elongation factor Tu domain 2 AFR_RS32600 PF08448 PAS fold AFR_RS32600 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS32600 PF13188 PAS domain AFR_RS32600 PF00072 Response regulator receiver domain AFR_RS32600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS32635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFR_RS32635 PF14572 Phosphoribosyl synthetase-associated domain AFR_RS32640 PF00005 ABC transporter AFR_RS32650 PF00005 ABC transporter AFR_RS32665 PF01544 CorA-like Mg2+ transporter protein AFR_RS32695 PF07584 Aerotolerance regulator N-terminal AFR_RS32695 PF13519 von Willebrand factor type A domain AFR_RS32700 PF13519 von Willebrand factor type A domain AFR_RS32700 PF07584 Aerotolerance regulator N-terminal AFR_RS32705 PF01882 Protein of unknown function DUF58 AFR_RS32710 PF17863 AAA lid domain AFR_RS32710 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS32715 PF13180 PDZ domain AFR_RS32715 PF17820 PDZ domain AFR_RS32720 PF00975 Thioesterase domain AFR_RS32720 PF00501 AMP-binding enzyme AFR_RS32720 PF00668 Condensation domain AFR_RS32720 PF13193 AMP-binding enzyme C-terminal domain AFR_RS32720 PF00550 Phosphopantetheine attachment site AFR_RS32725 PF01546 Peptidase family M20/M25/M40 AFR_RS32725 PF07687 Peptidase dimerisation domain AFR_RS32740 PF00722 Glycosyl hydrolases family 16 AFR_RS32770 PF04686 Streptomyces sporulation and cell division protein, SsgA AFR_RS32780 PF02082 Transcriptional regulator AFR_RS32800 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS32800 PF00072 Response regulator receiver domain AFR_RS32810 PF01569 PAP2 superfamily AFR_RS32820 PF02142 MGS-like domain AFR_RS32820 PF00781 Diacylglycerol kinase catalytic domain AFR_RS32860 PF00704 Glycosyl hydrolases family 18 AFR_RS32860 PF00041 Fibronectin type III domain AFR_RS32870 PF00067 Cytochrome P450 AFR_RS32875 PF02983 Alpha-lytic protease prodomain AFR_RS32875 PF00089 Trypsin AFR_RS32885 PF00486 Transcriptional regulatory protein, C terminal AFR_RS32885 PF00072 Response regulator receiver domain AFR_RS32890 PF00296 Luciferase-like monooxygenase AFR_RS32900 PF00384 Molybdopterin oxidoreductase AFR_RS32900 PF01568 Molydopterin dinucleotide binding domain AFR_RS32905 PF00005 ABC transporter AFR_RS32915 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS32920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS32920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS32920 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS32925 PF00296 Luciferase-like monooxygenase AFR_RS32930 PF01613 Flavin reductase like domain AFR_RS32935 PF00296 Luciferase-like monooxygenase AFR_RS32940 PF03358 NADPH-dependent FMN reductase AFR_RS32970 PF00444 Ribosomal protein L36 AFR_RS32980 PF00072 Response regulator receiver domain AFR_RS32980 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33005 PF01266 FAD dependent oxidoreductase AFR_RS33010 PF12804 MobA-like NTP transferase domain AFR_RS33010 PF00132 Bacterial transferase hexapeptide (six repeats) AFR_RS33030 PF13419 Haloacid dehalogenase-like hydrolase AFR_RS33035 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS33040 PF01965 DJ-1/PfpI family AFR_RS33060 PF00294 pfkB family carbohydrate kinase AFR_RS33065 PF01081 KDPG and KHG aldolase AFR_RS33085 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS33085 PF03707 Bacterial signalling protein N terminal repeat AFR_RS33085 PF00563 EAL domain AFR_RS33095 PF04545 Sigma-70, region 4 AFR_RS33095 PF04542 Sigma-70 region 2 AFR_RS33105 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33120 PF07690 Major Facilitator Superfamily AFR_RS33130 PF03073 TspO/MBR family AFR_RS33135 PF01494 FAD binding domain AFR_RS33155 PF00128 Alpha amylase, catalytic domain AFR_RS33165 PF13439 Glycosyltransferase Family 4 AFR_RS33180 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33180 PF00072 Response regulator receiver domain AFR_RS33185 PF10282 Lactonase, 7-bladed beta-propeller AFR_RS33190 PF07730 Histidine kinase AFR_RS33205 PF08448 PAS fold AFR_RS33205 PF13426 PAS domain AFR_RS33205 PF00563 EAL domain AFR_RS33205 PF08447 PAS fold AFR_RS33205 PF05231 MASE1 AFR_RS33205 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS33215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS33215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS33220 PF05368 NmrA-like family AFR_RS33230 PF00266 Aminotransferase class-V AFR_RS33235 PF03301 Tryptophan 2,3-dioxygenase AFR_RS33245 PF13411 MerR HTH family regulatory protein AFR_RS33255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS33255 PF00672 HAMP domain AFR_RS33265 PF00356 Bacterial regulatory proteins, lacI family AFR_RS33270 PF13416 Bacterial extracellular solute-binding protein AFR_RS33275 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS33280 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS33285 PF00128 Alpha amylase, catalytic domain AFR_RS33295 PF00041 Fibronectin type III domain AFR_RS33295 PF00704 Glycosyl hydrolases family 18 AFR_RS33300 PF00072 Response regulator receiver domain AFR_RS33300 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33305 PF07730 Histidine kinase AFR_RS33315 PF00916 Sulfate permease family AFR_RS33315 PF01740 STAS domain AFR_RS33325 PF00391 PEP-utilising enzyme, mobile domain AFR_RS33325 PF02896 PEP-utilising enzyme, TIM barrel domain AFR_RS33325 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFR_RS33330 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS33330 PF14403 Circularly permuted ATP-grasp type 2 AFR_RS33335 PF00733 Asparagine synthase AFR_RS33335 PF13537 Glutamine amidotransferase domain AFR_RS33340 PF00326 Prolyl oligopeptidase family AFR_RS33370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS33370 PF00989 PAS fold AFR_RS33370 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS33375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS33385 PF01513 ATP-NAD kinase AFR_RS33395 PF00313 'Cold-shock' DNA-binding domain AFR_RS33400 PF02983 Alpha-lytic protease prodomain AFR_RS33405 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS33405 PF16483 Beta-1,3-glucanase AFR_RS33410 PF07690 Major Facilitator Superfamily AFR_RS33420 PF04954 Siderophore-interacting protein AFR_RS33420 PF08021 Siderophore-interacting FAD-binding domain AFR_RS33435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS33435 PF03459 TOBE domain AFR_RS33445 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS33450 PF00005 ABC transporter AFR_RS33450 PF03459 TOBE domain AFR_RS33460 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AFR_RS33460 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AFR_RS33460 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AFR_RS33460 PF08531 Alpha-L-rhamnosidase N-terminal domain AFR_RS33475 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS33475 PF00107 Zinc-binding dehydrogenase AFR_RS33480 PF07730 Histidine kinase AFR_RS33485 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33485 PF00072 Response regulator receiver domain AFR_RS33495 PF13302 Acetyltransferase (GNAT) domain AFR_RS33510 PF00575 S1 RNA binding domain AFR_RS33515 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AFR_RS33525 PF04978 Protein of unknown function (DUF664) AFR_RS33535 PF00005 ABC transporter AFR_RS33545 PF01022 Bacterial regulatory protein, arsR family AFR_RS33590 PF00664 ABC transporter transmembrane region AFR_RS33590 PF00005 ABC transporter AFR_RS33595 PF00664 ABC transporter transmembrane region AFR_RS33595 PF00005 ABC transporter AFR_RS33615 PF00245 Alkaline phosphatase AFR_RS33620 PF02397 Bacterial sugar transferase AFR_RS33630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFR_RS33630 PF10531 SLBB domain AFR_RS33630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFR_RS33650 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33660 PF00072 Response regulator receiver domain AFR_RS33660 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33665 PF07730 Histidine kinase AFR_RS33675 PF00005 ABC transporter AFR_RS33675 PF13732 Domain of unknown function (DUF4162) AFR_RS33685 PF00005 ABC transporter AFR_RS33685 PF13732 Domain of unknown function (DUF4162) AFR_RS33690 PF00075 RNase H AFR_RS33700 PF00394 Multicopper oxidase AFR_RS33700 PF07731 Multicopper oxidase AFR_RS33700 PF07732 Multicopper oxidase AFR_RS33715 PF00296 Luciferase-like monooxygenase AFR_RS33720 PF06441 Epoxide hydrolase N terminus AFR_RS33730 PF01329 Pterin 4 alpha carbinolamine dehydratase AFR_RS33745 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33790 PF00356 Bacterial regulatory proteins, lacI family AFR_RS33800 PF13298 DNA polymerase Ligase (LigD) AFR_RS33800 PF04679 ATP dependent DNA ligase C terminal region AFR_RS33800 PF01068 ATP dependent DNA ligase domain AFR_RS33810 PF05384 Sensor protein DegS AFR_RS33810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS33810 PF07730 Histidine kinase AFR_RS33815 PF00072 Response regulator receiver domain AFR_RS33815 PF00196 Bacterial regulatory proteins, luxR family AFR_RS33825 PF17678 Glycosyl hydrolase family 92 N-terminal domain AFR_RS33825 PF07971 Glycosyl hydrolase family 92 AFR_RS33830 PF01243 Pyridoxamine 5'-phosphate oxidase AFR_RS33850 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS33850 PF08448 PAS fold AFR_RS33850 PF00563 EAL domain AFR_RS33850 PF08447 PAS fold AFR_RS33855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFR_RS33855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFR_RS33890 PF01433 Peptidase family M1 domain AFR_RS33890 PF11838 ERAP1-like C-terminal domain AFR_RS33935 PF01593 Flavin containing amine oxidoreductase AFR_RS33945 PF00722 Glycosyl hydrolases family 16 AFR_RS33955 PF00356 Bacterial regulatory proteins, lacI family AFR_RS33965 PF13460 NAD(P)H-binding AFR_RS33990 PF13411 MerR HTH family regulatory protein AFR_RS34005 PF00294 pfkB family carbohydrate kinase AFR_RS34010 PF01791 DeoC/LacD family aldolase AFR_RS34020 PF02653 Branched-chain amino acid transport system / permease component AFR_RS34025 PF00005 ABC transporter AFR_RS34030 PF01565 FAD binding domain AFR_RS34030 PF02913 FAD linked oxidases, C-terminal domain AFR_RS34050 PF00296 Luciferase-like monooxygenase AFR_RS34060 PF16483 Beta-1,3-glucanase AFR_RS34060 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS34070 PF00011 Hsp20/alpha crystallin family AFR_RS34080 PF11799 impB/mucB/samB family C-terminal domain AFR_RS34080 PF00817 impB/mucB/samB family AFR_RS34095 PF00072 Response regulator receiver domain AFR_RS34095 PF01339 CheB methylesterase AFR_RS34100 PF07350 Protein of unknown function (DUF1479) AFR_RS34115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS34125 PF02514 CobN/Magnesium Chelatase AFR_RS34130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFR_RS34130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFR_RS34135 PF02570 Precorrin-8X methylmutase AFR_RS34140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS34145 PF02571 Precorrin-6x reductase CbiJ/CobK AFR_RS34150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS34155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS34160 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS34160 PF00175 Oxidoreductase NAD-binding domain AFR_RS34160 PF00970 Oxidoreductase FAD-binding domain AFR_RS34195 PF00589 Phage integrase family AFR_RS34195 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS34215 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34215 PF00072 Response regulator receiver domain AFR_RS34225 PF03176 MMPL family AFR_RS34235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFR_RS34235 PF01568 Molydopterin dinucleotide binding domain AFR_RS34235 PF00384 Molybdopterin oxidoreductase AFR_RS34245 PF00082 Subtilase family AFR_RS34265 PF03734 L,D-transpeptidase catalytic domain AFR_RS34265 PF17964 Bacterial Ig domain AFR_RS34275 PF04542 Sigma-70 region 2 AFR_RS34275 PF08281 Sigma-70, region 4 AFR_RS34285 PF00486 Transcriptional regulatory protein, C terminal AFR_RS34285 PF00072 Response regulator receiver domain AFR_RS34290 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS34290 PF00672 HAMP domain AFR_RS34290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS34295 PF00561 alpha/beta hydrolase fold AFR_RS34300 PF01638 HxlR-like helix-turn-helix AFR_RS34310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFR_RS34310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFR_RS34315 PF12833 Helix-turn-helix domain AFR_RS34315 PF01965 DJ-1/PfpI family AFR_RS34335 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34345 PF16338 Domain of unknown function (DUF4968) AFR_RS34345 PF17137 Domain of unknown function (DUF5110) AFR_RS34345 PF13802 Galactose mutarotase-like AFR_RS34345 PF01055 Glycosyl hydrolases family 31 AFR_RS34350 PF00005 ABC transporter AFR_RS34360 PF07730 Histidine kinase AFR_RS34360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS34365 PF00072 Response regulator receiver domain AFR_RS34365 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34380 PF07730 Histidine kinase AFR_RS34380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS34385 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34385 PF00072 Response regulator receiver domain AFR_RS34420 PF01726 LexA DNA binding domain AFR_RS34420 PF00717 Peptidase S24-like AFR_RS34425 PF02785 Biotin carboxylase C-terminal domain AFR_RS34425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS34425 PF00289 Biotin carboxylase, N-terminal domain AFR_RS34470 PF13360 PQQ-like domain AFR_RS34470 PF00069 Protein kinase domain AFR_RS34475 PF04545 Sigma-70, region 4 AFR_RS34475 PF04542 Sigma-70 region 2 AFR_RS34505 PF04545 Sigma-70, region 4 AFR_RS34505 PF04542 Sigma-70 region 2 AFR_RS34515 PF07729 FCD domain AFR_RS34515 PF00392 Bacterial regulatory proteins, gntR family AFR_RS34520 PF01425 Amidase AFR_RS34525 PF00857 Isochorismatase family AFR_RS34530 PF00857 Isochorismatase family AFR_RS34545 PF01494 FAD binding domain AFR_RS34555 PF00294 pfkB family carbohydrate kinase AFR_RS34560 PF00144 Beta-lactamase AFR_RS34570 PF12833 Helix-turn-helix domain AFR_RS34570 PF06719 AraC-type transcriptional regulator N-terminus AFR_RS34575 PF00248 Aldo/keto reductase family AFR_RS34580 PF00376 MerR family regulatory protein AFR_RS34580 PF09278 MerR, DNA binding AFR_RS34585 PF00085 Thioredoxin AFR_RS34595 PF00484 Carbonic anhydrase AFR_RS34600 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS34615 PF00005 ABC transporter AFR_RS34615 PF12704 MacB-like periplasmic core domain AFR_RS34615 PF02687 FtsX-like permease family AFR_RS34620 PF00005 ABC transporter AFR_RS34625 PF13411 MerR HTH family regulatory protein AFR_RS34630 PF00440 Bacterial regulatory proteins, tetR family AFR_RS34635 PF00106 short chain dehydrogenase AFR_RS34705 PF05922 Peptidase inhibitor I9 AFR_RS34705 PF00082 Subtilase family AFR_RS34715 PF05922 Peptidase inhibitor I9 AFR_RS34715 PF00082 Subtilase family AFR_RS34725 PF08447 PAS fold AFR_RS34725 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS34725 PF00563 EAL domain AFR_RS34725 PF08448 PAS fold AFR_RS34740 PF00005 ABC transporter AFR_RS34745 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS34755 PF00491 Arginase family AFR_RS34790 PF00072 Response regulator receiver domain AFR_RS34790 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34800 PF00487 Fatty acid desaturase AFR_RS34805 PF00106 short chain dehydrogenase AFR_RS34815 PF00753 Metallo-beta-lactamase superfamily AFR_RS34820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AFR_RS34820 PF00953 Glycosyl transferase family 4 AFR_RS34830 PF00459 Inositol monophosphatase family AFR_RS34835 PF01569 PAP2 superfamily AFR_RS34840 PF00072 Response regulator receiver domain AFR_RS34840 PF00196 Bacterial regulatory proteins, luxR family AFR_RS34865 PF13193 AMP-binding enzyme C-terminal domain AFR_RS34865 PF00501 AMP-binding enzyme AFR_RS34865 PF16177 Acetyl-coenzyme A synthetase N-terminus AFR_RS34875 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS34880 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS34890 PF13580 SIS domain AFR_RS34895 PF01418 Helix-turn-helix domain, rpiR family AFR_RS34895 PF01380 SIS domain AFR_RS34910 PF00501 AMP-binding enzyme AFR_RS34910 PF13193 AMP-binding enzyme C-terminal domain AFR_RS34915 PF00356 Bacterial regulatory proteins, lacI family AFR_RS34925 PF00356 Bacterial regulatory proteins, lacI family AFR_RS34930 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS34930 PF00107 Zinc-binding dehydrogenase AFR_RS34940 PF05199 GMC oxidoreductase AFR_RS34945 PF00331 Glycosyl hydrolase family 10 AFR_RS34945 PF00553 Cellulose binding domain AFR_RS34950 PF11774 Lsr2 AFR_RS34955 PF00106 short chain dehydrogenase AFR_RS34965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFR_RS34965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFR_RS34970 PF03450 CO dehydrogenase flavoprotein C-terminal domain AFR_RS34970 PF00941 FAD binding domain in molybdopterin dehydrogenase AFR_RS34975 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS34975 PF10518 TAT (twin-arginine translocation) pathway signal sequence AFR_RS34975 PF01799 [2Fe-2S] binding domain AFR_RS34990 PF00563 EAL domain AFR_RS34990 PF03707 Bacterial signalling protein N terminal repeat AFR_RS34990 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS35000 PF01566 Natural resistance-associated macrophage protein AFR_RS35005 PF03746 LamB/YcsF family AFR_RS35010 PF07286 Protein of unknown function (DUF1445) AFR_RS35015 PF02682 Carboxyltransferase domain, subdomain C and D AFR_RS35025 PF02626 Carboxyltransferase domain, subdomain A and B AFR_RS35030 PF00392 Bacterial regulatory proteins, gntR family AFR_RS35030 PF07702 UTRA domain AFR_RS35070 PF04545 Sigma-70, region 4 AFR_RS35070 PF04542 Sigma-70 region 2 AFR_RS35095 PF13476 AAA domain AFR_RS35100 PF00149 Calcineurin-like phosphoesterase AFR_RS35100 PF12320 Type 5 capsule protein repressor C-terminal domain AFR_RS35115 PF00356 Bacterial regulatory proteins, lacI family AFR_RS35135 PF04055 Radical SAM superfamily AFR_RS35135 PF06968 Biotin and Thiamin Synthesis associated domain AFR_RS35140 PF00155 Aminotransferase class I and II AFR_RS35150 PF00583 Acetyltransferase (GNAT) family AFR_RS35155 PF00571 CBS domain AFR_RS35155 PF03471 Transporter associated domain AFR_RS35155 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS35160 PF03632 Glycosyl hydrolase family 65 central catalytic domain AFR_RS35160 PF03636 Glycosyl hydrolase family 65, N-terminal domain AFR_RS35160 PF03633 Glycosyl hydrolase family 65, C-terminal domain AFR_RS35165 PF00294 pfkB family carbohydrate kinase AFR_RS35175 PF00781 Diacylglycerol kinase catalytic domain AFR_RS35195 PF12706 Beta-lactamase superfamily domain AFR_RS35205 PF13286 Phosphohydrolase-associated domain AFR_RS35205 PF01966 HD domain AFR_RS35230 PF00106 short chain dehydrogenase AFR_RS35235 PF01068 ATP dependent DNA ligase domain AFR_RS35235 PF04679 ATP dependent DNA ligase C terminal region AFR_RS35240 PF00561 alpha/beta hydrolase fold AFR_RS35245 PF00027 Cyclic nucleotide-binding domain AFR_RS35245 PF00520 Ion transport protein AFR_RS35260 PF12704 MacB-like periplasmic core domain AFR_RS35260 PF02687 FtsX-like permease family AFR_RS35260 PF00005 ABC transporter AFR_RS35265 PF07730 Histidine kinase AFR_RS35270 PF00072 Response regulator receiver domain AFR_RS35270 PF00196 Bacterial regulatory proteins, luxR family AFR_RS35275 PF03466 LysR substrate binding domain AFR_RS35275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS35280 PF00107 Zinc-binding dehydrogenase AFR_RS35280 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS35290 PF13298 DNA polymerase Ligase (LigD) AFR_RS35290 PF01068 ATP dependent DNA ligase domain AFR_RS35290 PF04679 ATP dependent DNA ligase C terminal region AFR_RS35305 PF01641 SelR domain AFR_RS35310 PF00186 Dihydrofolate reductase AFR_RS35315 PF00303 Thymidylate synthase AFR_RS35330 PF03358 NADPH-dependent FMN reductase AFR_RS35340 PF13673 Acetyltransferase (GNAT) domain AFR_RS35345 PF06778 Chlorite dismutase AFR_RS35350 PF01593 Flavin containing amine oxidoreductase AFR_RS35355 PF01208 Uroporphyrinogen decarboxylase (URO-D) AFR_RS35365 PF13180 PDZ domain AFR_RS35370 PF01612 3'-5' exonuclease AFR_RS35370 PF00570 HRDC domain AFR_RS35380 PF02803 Thiolase, C-terminal domain AFR_RS35380 PF00108 Thiolase, N-terminal domain AFR_RS35385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFR_RS35385 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS35385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFR_RS35405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS35405 PF00672 HAMP domain AFR_RS35405 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS35410 PF00486 Transcriptional regulatory protein, C terminal AFR_RS35410 PF00072 Response regulator receiver domain AFR_RS35430 PF02780 Transketolase, C-terminal domain AFR_RS35430 PF02779 Transketolase, pyrimidine binding domain AFR_RS35430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AFR_RS35435 PF00375 Sodium:dicarboxylate symporter family AFR_RS35440 PF01938 TRAM domain AFR_RS35440 PF05958 tRNA (Uracil-5-)-methyltransferase AFR_RS35445 PF13520 Amino acid permease AFR_RS35450 PF02080 TrkA-C domain AFR_RS35450 PF02254 TrkA-N domain AFR_RS35455 PF02080 TrkA-C domain AFR_RS35455 PF02254 TrkA-N domain AFR_RS35475 PF00692 dUTPase AFR_RS35500 PF00459 Inositol monophosphatase family AFR_RS35505 PF04542 Sigma-70 region 2 AFR_RS35505 PF00140 Sigma-70 factor, region 1.2 AFR_RS35505 PF04545 Sigma-70, region 4 AFR_RS35505 PF04539 Sigma-70 region 3 AFR_RS35515 PF04851 Type III restriction enzyme, res subunit AFR_RS35520 PF03458 UPF0126 domain AFR_RS35530 PF04227 Indigoidine synthase A like protein AFR_RS35555 PF00392 Bacterial regulatory proteins, gntR family AFR_RS35555 PF07702 UTRA domain AFR_RS35560 PF01791 DeoC/LacD family aldolase AFR_RS35585 PF02580 D-Tyr-tRNA(Tyr) deacylase AFR_RS35595 PF04545 Sigma-70, region 4 AFR_RS35595 PF04542 Sigma-70 region 2 AFR_RS35595 PF00140 Sigma-70 factor, region 1.2 AFR_RS35595 PF04539 Sigma-70 region 3 AFR_RS35605 PF02629 CoA binding domain AFR_RS35605 PF00549 CoA-ligase AFR_RS35610 PF00850 Histone deacetylase domain AFR_RS35615 PF18357 Diphteria toxin repressor SH3 domain AFR_RS35615 PF02742 Iron dependent repressor, metal binding and dimerisation domain AFR_RS35615 PF01325 Iron dependent repressor, N-terminal DNA binding domain AFR_RS35640 PF07690 Major Facilitator Superfamily AFR_RS35660 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AFR_RS35685 PF02867 Ribonucleotide reductase, barrel domain AFR_RS35685 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AFR_RS35690 PF03477 ATP cone domain AFR_RS35700 PF01726 LexA DNA binding domain AFR_RS35700 PF00717 Peptidase S24-like AFR_RS35715 PF13167 GTP-binding GTPase N-terminal AFR_RS35715 PF16360 GTP-binding GTPase Middle Region AFR_RS35715 PF01926 50S ribosome-binding GTPase AFR_RS35720 PF00390 Malic enzyme, N-terminal domain AFR_RS35720 PF03949 Malic enzyme, NAD binding domain AFR_RS35730 PF01678 Diaminopimelate epimerase AFR_RS35740 PF03993 Domain of Unknown Function (DUF349) AFR_RS35745 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS35755 PF01638 HxlR-like helix-turn-helix AFR_RS35760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS35760 PF03466 LysR substrate binding domain AFR_RS35770 PF03707 Bacterial signalling protein N terminal repeat AFR_RS35770 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS35770 PF00563 EAL domain AFR_RS35775 PF04055 Radical SAM superfamily AFR_RS35775 PF00919 Uncharacterized protein family UPF0004 AFR_RS35785 PF00005 ABC transporter AFR_RS35790 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFR_RS35795 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS35800 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS35815 PF12072 Domain of unknown function (DUF3552) AFR_RS35815 PF00013 KH domain AFR_RS35815 PF01966 HD domain AFR_RS35830 PF02631 RecX family AFR_RS35835 PF00154 recA bacterial DNA recombination protein AFR_RS35850 PF03167 Uracil DNA glycosylase superfamily AFR_RS35855 PF02867 Ribonucleotide reductase, barrel domain AFR_RS35855 PF03477 ATP cone domain AFR_RS35855 PF00317 Ribonucleotide reductase, all-alpha domain AFR_RS35865 PF00155 Aminotransferase class I and II AFR_RS35865 PF00392 Bacterial regulatory proteins, gntR family AFR_RS35880 PF01810 LysE type translocator AFR_RS35885 PF07070 SpoOM protein AFR_RS35890 PF03471 Transporter associated domain AFR_RS35890 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS35890 PF00571 CBS domain AFR_RS35895 PF01595 Cyclin M transmembrane N-terminal domain AFR_RS35895 PF03471 Transporter associated domain AFR_RS35895 PF00571 CBS domain AFR_RS35900 PF04389 Peptidase family M28 AFR_RS35900 PF01483 Proprotein convertase P-domain AFR_RS35905 PF00069 Protein kinase domain AFR_RS35905 PF03793 PASTA domain AFR_RS35920 PF08494 DEAD/H associated AFR_RS35920 PF00270 DEAD/DEAH box helicase AFR_RS35920 PF00271 Helicase conserved C-terminal domain AFR_RS35935 PF00296 Luciferase-like monooxygenase AFR_RS35960 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFR_RS35960 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFR_RS35970 PF04012 PspA/IM30 family AFR_RS35980 PF18146 Damage-inducible protein CinA KH domain AFR_RS35980 PF02464 Competence-damaged protein AFR_RS35980 PF00994 Probable molybdopterin binding domain AFR_RS35985 PF01066 CDP-alcohol phosphatidyltransferase AFR_RS35990 PF00919 Uncharacterized protein family UPF0004 AFR_RS35990 PF18693 TRAM domain AFR_RS35990 PF04055 Radical SAM superfamily AFR_RS36000 PF01580 FtsK/SpoIIIE family AFR_RS36000 PF09397 Ftsk gamma domain AFR_RS36000 PF17854 FtsK alpha domain AFR_RS36015 PF02983 Alpha-lytic protease prodomain AFR_RS36020 PF12706 Beta-lactamase superfamily domain AFR_RS36020 PF17770 Ribonuclease J C-terminal domain AFR_RS36020 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AFR_RS36025 PF00701 Dihydrodipicolinate synthetase family AFR_RS36035 PF06224 Winged helix DNA-binding domain AFR_RS36050 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS36055 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS36065 PF00356 Bacterial regulatory proteins, lacI family AFR_RS36075 PF01113 Dihydrodipicolinate reductase, N-terminus AFR_RS36075 PF05173 Dihydrodipicolinate reductase, C-terminus AFR_RS36085 PF05193 Peptidase M16 inactive domain AFR_RS36085 PF00675 Insulinase (Peptidase family M16) AFR_RS36090 PF00575 S1 RNA binding domain AFR_RS36090 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AFR_RS36090 PF01138 3' exoribonuclease family, domain 1 AFR_RS36090 PF00013 KH domain AFR_RS36095 PF00312 Ribosomal protein S15 AFR_RS36100 PF06574 FAD synthetase AFR_RS36100 PF01687 Riboflavin kinase AFR_RS36105 PF00989 PAS fold AFR_RS36105 PF01627 Hpt domain AFR_RS36105 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS36105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS36105 PF00072 Response regulator receiver domain AFR_RS36105 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFR_RS36110 PF00072 Response regulator receiver domain AFR_RS36110 PF00486 Transcriptional regulatory protein, C terminal AFR_RS36115 PF01509 TruB family pseudouridylate synthase (N terminal domain) AFR_RS36115 PF16198 tRNA pseudouridylate synthase B C-terminal domain AFR_RS36115 PF09142 tRNA Pseudouridine synthase II, C terminal AFR_RS36135 PF01368 DHH family AFR_RS36135 PF02272 DHHA1 domain AFR_RS36140 PF02033 Ribosome-binding factor A AFR_RS36150 PF08241 Methyltransferase domain AFR_RS36155 PF04760 Translation initiation factor IF-2, N-terminal region AFR_RS36155 PF11987 Translation-initiation factor 2 AFR_RS36155 PF00009 Elongation factor Tu GTP binding domain AFR_RS36165 PF13184 NusA-like KH domain AFR_RS36165 PF08529 NusA N-terminal domain AFR_RS36170 PF17384 RimP C-terminal SH3 domain AFR_RS36170 PF02576 RimP N-terminal domain AFR_RS36195 PF00557 Metallopeptidase family M24 AFR_RS36205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS36205 PF08448 PAS fold AFR_RS36205 PF13426 PAS domain AFR_RS36205 PF00072 Response regulator receiver domain AFR_RS36205 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS36215 PF07722 Peptidase C26 AFR_RS36220 PF07722 Peptidase C26 AFR_RS36230 PF00171 Aldehyde dehydrogenase family AFR_RS36235 PF00120 Glutamine synthetase, catalytic domain AFR_RS36250 PF00106 short chain dehydrogenase AFR_RS36270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS36270 PF07730 Histidine kinase AFR_RS36275 PF00072 Response regulator receiver domain AFR_RS36275 PF00196 Bacterial regulatory proteins, luxR family AFR_RS36280 PF00005 ABC transporter AFR_RS36280 PF13732 Domain of unknown function (DUF4162) AFR_RS36290 PF08359 YsiA-like protein, C-terminal region AFR_RS36290 PF00440 Bacterial regulatory proteins, tetR family AFR_RS36300 PF00005 ABC transporter AFR_RS36310 PF00583 Acetyltransferase (GNAT) family AFR_RS36320 PF04551 GcpE protein AFR_RS36325 PF02163 Peptidase family M50 AFR_RS36325 PF17820 PDZ domain AFR_RS36330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AFR_RS36330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AFR_RS36330 PF13288 DXP reductoisomerase C-terminal domain AFR_RS36340 PF03176 MMPL family AFR_RS36345 PF13305 Tetracyclin repressor-like, C-terminal domain AFR_RS36345 PF00440 Bacterial regulatory proteins, tetR family AFR_RS36355 PF00355 Rieske [2Fe-2S] domain AFR_RS36370 PF04055 Radical SAM superfamily AFR_RS36380 PF01765 Ribosome recycling factor AFR_RS36385 PF00696 Amino acid kinase family AFR_RS36390 PF00889 Elongation factor TS AFR_RS36395 PF00318 Ribosomal protein S2 AFR_RS36405 PF02021 Uncharacterised protein family UPF0102 AFR_RS36410 PF13335 Magnesium chelatase, subunit ChlI C-terminal AFR_RS36410 PF01078 Magnesium chelatase, subunit ChlI AFR_RS36415 PF02481 DNA recombination-mediator protein A AFR_RS36415 PF17782 DprA winged helix domain AFR_RS36430 PF07702 UTRA domain AFR_RS36430 PF00392 Bacterial regulatory proteins, gntR family AFR_RS36445 PF00589 Phage integrase family AFR_RS36445 PF02899 Phage integrase, N-terminal SAM-like domain AFR_RS36450 PF00266 Aminotransferase class-V AFR_RS36455 PF01551 Peptidase family M23 AFR_RS36460 PF10611 Protein of unknown function (DUF2469) AFR_RS36465 PF01351 Ribonuclease HII AFR_RS36470 PF03099 Biotin/lipoate A/B protein ligase family AFR_RS36470 PF00293 NUDIX domain AFR_RS36475 PF10502 Signal peptidase, peptidase S26 AFR_RS36480 PF10502 Signal peptidase, peptidase S26 AFR_RS36485 PF01245 Ribosomal protein L19 AFR_RS36490 PF01746 tRNA (Guanine-1)-methyltransferase AFR_RS36495 PF05239 PRC-barrel domain AFR_RS36495 PF01782 RimM N-terminal domain AFR_RS36505 PF00886 Ribosomal protein S16 AFR_RS36520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS36520 PF03129 Anticodon binding domain AFR_RS36535 PF01979 Amidohydrolase family AFR_RS36545 PF02978 Signal peptide binding domain AFR_RS36545 PF02881 SRP54-type protein, helical bundle domain AFR_RS36545 PF00448 SRP54-type protein, GTPase domain AFR_RS36555 PF17102 Stealth protein CR3, conserved region 3 AFR_RS36555 PF11380 Stealth protein CR2, conserved region 2 AFR_RS36555 PF17101 Stealth protein CR1, conserved region 1 AFR_RS36555 PF17103 Stealth protein CR4, conserved region 4 AFR_RS36560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFR_RS36560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFR_RS36560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFR_RS36565 PF01757 Acyltransferase family AFR_RS36580 PF00535 Glycosyl transferase family 2 AFR_RS36585 PF05675 Protein of unknown function (DUF817) AFR_RS36590 PF01966 HD domain AFR_RS36590 PF08335 GlnD PII-uridylyltransferase AFR_RS36590 PF01909 Nucleotidyltransferase domain AFR_RS36595 PF00543 Nitrogen regulatory protein P-II AFR_RS36600 PF00909 Ammonium Transporter Family AFR_RS36610 PF02881 SRP54-type protein, helical bundle domain AFR_RS36610 PF00448 SRP54-type protein, GTPase domain AFR_RS36620 PF04978 Protein of unknown function (DUF664) AFR_RS36660 PF06470 SMC proteins Flexible Hinge Domain AFR_RS36660 PF02463 RecF/RecN/SMC N terminal domain AFR_RS36670 PF00188 Cysteine-rich secretory protein family AFR_RS36690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFR_RS36690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFR_RS36690 PF06827 Zinc finger found in FPG and IleRS AFR_RS36700 PF00035 Double-stranded RNA binding motif AFR_RS36700 PF14622 Ribonuclease-III-like AFR_RS36705 PF02504 Fatty acid synthesis protein AFR_RS36710 PF01783 Ribosomal L32p protein family AFR_RS36715 PF02620 Large ribosomal RNA subunit accumulation protein YceD AFR_RS36725 PF01467 Cytidylyltransferase-like AFR_RS36755 PF00270 DEAD/DEAH box helicase AFR_RS36755 PF17191 RecG wedge domain AFR_RS36755 PF00271 Helicase conserved C-terminal domain AFR_RS36760 PF02734 DAK2 domain AFR_RS36760 PF13684 Dihydroxyacetone kinase family AFR_RS36765 PF00830 Ribosomal L28 family AFR_RS36770 PF00583 Acetyltransferase (GNAT) family AFR_RS36775 PF00586 AIR synthase related protein, N-terminal domain AFR_RS36775 PF02769 AIR synthase related protein, C-terminal domain AFR_RS36790 PF01820 D-ala D-ala ligase N-terminus AFR_RS36790 PF07478 D-ala D-ala ligase C-terminus AFR_RS36805 PF00005 ABC transporter AFR_RS36810 PF07702 UTRA domain AFR_RS36810 PF00392 Bacterial regulatory proteins, gntR family AFR_RS36820 PF01053 Cys/Met metabolism PLP-dependent enzyme AFR_RS36825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AFR_RS36825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AFR_RS36835 PF12804 MobA-like NTP transferase domain AFR_RS36845 PF13090 Polyphosphate kinase C-terminal domain 2 AFR_RS36845 PF02503 Polyphosphate kinase middle domain AFR_RS36845 PF13089 Polyphosphate kinase N-terminal domain AFR_RS36845 PF17941 Polyphosphate kinase C-terminal domain 1 AFR_RS36850 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS36850 PF00293 NUDIX domain AFR_RS36860 PF00216 Bacterial DNA-binding protein AFR_RS36865 PF00694 Aconitase C-terminal domain AFR_RS36870 PF00330 Aconitase family (aconitate hydratase) AFR_RS36880 PF00753 Metallo-beta-lactamase superfamily AFR_RS36895 PF13460 NAD(P)H-binding AFR_RS36905 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFR_RS36910 PF01381 Helix-turn-helix AFR_RS36920 PF00005 ABC transporter AFR_RS36940 PF00472 RF-1 domain AFR_RS36940 PF03462 PCRF domain AFR_RS36945 PF00892 EamA-like transporter family AFR_RS36955 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS36955 PF00672 HAMP domain AFR_RS36955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS36960 PF00486 Transcriptional regulatory protein, C terminal AFR_RS36960 PF00072 Response regulator receiver domain AFR_RS36965 PF13180 PDZ domain AFR_RS36970 PF13519 von Willebrand factor type A domain AFR_RS36975 PF01882 Protein of unknown function DUF58 AFR_RS36980 PF07726 ATPase family associated with various cellular activities (AAA) AFR_RS36980 PF17863 AAA lid domain AFR_RS36985 PF00675 Insulinase (Peptidase family M16) AFR_RS36985 PF05193 Peptidase M16 inactive domain AFR_RS37005 PF00440 Bacterial regulatory proteins, tetR family AFR_RS37005 PF08361 MAATS-type transcriptional repressor, C-terminal region AFR_RS37020 PF08502 LeuA allosteric (dimerisation) domain AFR_RS37020 PF00682 HMGL-like AFR_RS37040 PF01063 Amino-transferase class IV AFR_RS37045 PF00180 Isocitrate/isopropylmalate dehydrogenase AFR_RS37055 PF01842 ACT domain AFR_RS37055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFR_RS37055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS37070 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AFR_RS37070 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AFR_RS37075 PF10369 Small subunit of acetolactate synthase AFR_RS37080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFR_RS37080 PF00205 Thiamine pyrophosphate enzyme, central domain AFR_RS37080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS37085 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS37085 PF03707 Bacterial signalling protein N terminal repeat AFR_RS37085 PF00563 EAL domain AFR_RS37090 PF00920 Dehydratase family AFR_RS37100 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS37105 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS37115 PF00356 Bacterial regulatory proteins, lacI family AFR_RS37125 PF00563 EAL domain AFR_RS37125 PF01590 GAF domain AFR_RS37125 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS37125 PF00360 Phytochrome region AFR_RS37130 PF02597 ThiS family AFR_RS37145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFR_RS37150 PF07995 Glucose / Sorbosone dehydrogenase AFR_RS37160 PF02637 GatB domain AFR_RS37160 PF02934 GatB/GatE catalytic domain AFR_RS37165 PF01425 Amidase AFR_RS37170 PF02686 Glu-tRNAGln amidotransferase C subunit AFR_RS37175 PF03707 Bacterial signalling protein N terminal repeat AFR_RS37175 PF00563 EAL domain AFR_RS37175 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS37185 PF12826 Helix-hairpin-helix motif AFR_RS37185 PF03120 NAD-dependent DNA ligase OB-fold domain AFR_RS37185 PF01653 NAD-dependent DNA ligase adenylation domain AFR_RS37185 PF00533 BRCA1 C Terminus (BRCT) domain AFR_RS37185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AFR_RS37210 PF00266 Aminotransferase class-V AFR_RS37215 PF00766 Electron transfer flavoprotein FAD-binding domain AFR_RS37215 PF01012 Electron transfer flavoprotein domain AFR_RS37220 PF01012 Electron transfer flavoprotein domain AFR_RS37225 PF02656 Domain of unknown function (DUF202) AFR_RS37240 PF00205 Thiamine pyrophosphate enzyme, central domain AFR_RS37240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFR_RS37240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS37245 PF00012 Hsp70 protein AFR_RS37255 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS37275 PF00294 pfkB family carbohydrate kinase AFR_RS37280 PF00005 ABC transporter AFR_RS37290 PF00933 Glycosyl hydrolase family 3 N terminal domain AFR_RS37305 PF00440 Bacterial regulatory proteins, tetR family AFR_RS37310 PF00403 Heavy-metal-associated domain AFR_RS37315 PF00440 Bacterial regulatory proteins, tetR family AFR_RS37315 PF02909 Tetracyclin repressor-like, C-terminal domain AFR_RS37325 PF05088 Bacterial NAD-glutamate dehydrogenase AFR_RS37330 PF00905 Penicillin binding protein transpeptidase domain AFR_RS37335 PF00491 Arginase family AFR_RS37340 PF00085 Thioredoxin AFR_RS37345 PF00106 short chain dehydrogenase AFR_RS37360 PF02310 B12 binding domain AFR_RS37360 PF01642 Methylmalonyl-CoA mutase AFR_RS37365 PF02868 Thermolysin metallopeptidase, alpha-helical domain AFR_RS37365 PF01483 Proprotein convertase P-domain AFR_RS37365 PF07504 Fungalysin/Thermolysin Propeptide Motif AFR_RS37365 PF01447 Thermolysin metallopeptidase, catalytic domain AFR_RS37380 PF03707 Bacterial signalling protein N terminal repeat AFR_RS37380 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS37380 PF00563 EAL domain AFR_RS37385 PF01494 FAD binding domain AFR_RS37400 PF00108 Thiolase, N-terminal domain AFR_RS37400 PF02803 Thiolase, C-terminal domain AFR_RS37435 PF00171 Aldehyde dehydrogenase family AFR_RS37440 PF00005 ABC transporter AFR_RS37440 PF09383 NIL domain AFR_RS37450 PF01939 Endonuclease NucS AFR_RS37465 PF01580 FtsK/SpoIIIE family AFR_RS37475 PF00005 ABC transporter AFR_RS37485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFR_RS37485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFR_RS37500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFR_RS37505 PF01923 Cobalamin adenosyltransferase AFR_RS37515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFR_RS37520 PF03816 Cell envelope-related transcriptional attenuator domain AFR_RS37525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFR_RS37525 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFR_RS37530 PF00231 ATP synthase AFR_RS37535 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFR_RS37535 PF00306 ATP synthase alpha/beta chain, C terminal domain AFR_RS37535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFR_RS37540 PF00213 ATP synthase delta (OSCP) subunit AFR_RS37545 PF00430 ATP synthase B/B' CF(0) AFR_RS37550 PF00137 ATP synthase subunit C AFR_RS37555 PF00119 ATP synthase A chain AFR_RS37570 PF00464 Serine hydroxymethyltransferase AFR_RS37575 PF11066 Protein of unknown function (DUF2867) AFR_RS37575 PF13460 NAD(P)H-binding AFR_RS37580 PF01300 Telomere recombination AFR_RS37580 PF03481 Putative GTP-binding controlling metal-binding AFR_RS37585 PF01451 Low molecular weight phosphotyrosine protein phosphatase AFR_RS37590 PF01300 Telomere recombination AFR_RS37595 PF17827 PrmC N-terminal domain AFR_RS37595 PF05175 Methyltransferase small domain AFR_RS37600 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS37610 PF03462 PCRF domain AFR_RS37610 PF00472 RF-1 domain AFR_RS37615 PF01197 Ribosomal protein L31 AFR_RS37635 PF02898 Nitric oxide synthase, oxygenase domain AFR_RS37640 PF07497 Rho termination factor, RNA-binding domain AFR_RS37640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFR_RS37640 PF07498 Rho termination factor, N-terminal domain AFR_RS37645 PF00288 GHMP kinases N terminal domain AFR_RS37660 PF00873 AcrB/AcrD/AcrF family AFR_RS37665 PF01047 MarR family AFR_RS37670 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS37675 PF00742 Homoserine dehydrogenase AFR_RS37675 PF03447 Homoserine dehydrogenase, NAD binding domain AFR_RS37675 PF01842 ACT domain AFR_RS37680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFR_RS37680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFR_RS37685 PF05746 DALR anticodon binding domain AFR_RS37685 PF00750 tRNA synthetases class I (R) AFR_RS37685 PF03485 Arginyl tRNA synthetase N terminal domain AFR_RS37710 PF00107 Zinc-binding dehydrogenase AFR_RS37710 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS37740 PF00106 short chain dehydrogenase AFR_RS37750 PF13193 AMP-binding enzyme C-terminal domain AFR_RS37750 PF00501 AMP-binding enzyme AFR_RS37755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS37760 PF00221 Aromatic amino acid lyase AFR_RS37770 PF01070 FMN-dependent dehydrogenase AFR_RS37780 PF00999 Sodium/hydrogen exchanger family AFR_RS37785 PF00486 Transcriptional regulatory protein, C terminal AFR_RS37785 PF00072 Response regulator receiver domain AFR_RS37790 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS37790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS37800 PF03793 PASTA domain AFR_RS37800 PF00069 Protein kinase domain AFR_RS37810 PF00144 Beta-lactamase AFR_RS37835 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFR_RS37835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS37840 PF01638 HxlR-like helix-turn-helix AFR_RS37845 PF01738 Dienelactone hydrolase family AFR_RS37855 PF00106 short chain dehydrogenase AFR_RS37860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS37860 PF03466 LysR substrate binding domain AFR_RS37870 PF07690 Major Facilitator Superfamily AFR_RS37875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AFR_RS37885 PF12833 Helix-turn-helix domain AFR_RS37885 PF14525 AraC-binding-like domain AFR_RS37900 PF00583 Acetyltransferase (GNAT) family AFR_RS37915 PF02469 Fasciclin domain AFR_RS37930 PF04542 Sigma-70 region 2 AFR_RS37930 PF04545 Sigma-70, region 4 AFR_RS37935 PF04542 Sigma-70 region 2 AFR_RS37935 PF08281 Sigma-70, region 4 AFR_RS37945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS37945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS37965 PF08281 Sigma-70, region 4 AFR_RS37965 PF04542 Sigma-70 region 2 AFR_RS37970 PF03738 Glutathionylspermidine synthase preATP-grasp AFR_RS37985 PF16657 Maltogenic Amylase, C-terminal domain AFR_RS37985 PF00128 Alpha amylase, catalytic domain AFR_RS38010 PF09335 SNARE associated Golgi protein AFR_RS38020 PF00704 Glycosyl hydrolases family 18 AFR_RS38020 PF00041 Fibronectin type III domain AFR_RS38025 PF14849 YidC periplasmic domain AFR_RS38025 PF02096 60Kd inner membrane protein AFR_RS38035 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS38040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS38040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS38045 PF01522 Polysaccharide deacetylase AFR_RS38050 PF06827 Zinc finger found in FPG and IleRS AFR_RS38050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFR_RS38050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFR_RS38055 PF00574 Clp protease AFR_RS38070 PF00202 Aminotransferase class-III AFR_RS38080 PF01329 Pterin 4 alpha carbinolamine dehydratase AFR_RS38105 PF00041 Fibronectin type III domain AFR_RS38105 PF02018 Carbohydrate binding domain AFR_RS38105 PF00704 Glycosyl hydrolases family 18 AFR_RS38110 PF17912 MalK OB fold domain AFR_RS38110 PF00005 ABC transporter AFR_RS38135 PF00672 HAMP domain AFR_RS38135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS38135 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS38140 PF00072 Response regulator receiver domain AFR_RS38140 PF00486 Transcriptional regulatory protein, C terminal AFR_RS38145 PF01553 Acyltransferase AFR_RS38155 PF00005 ABC transporter AFR_RS38165 PF16078 2-oxoglutarate dehydrogenase N-terminus AFR_RS38165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFR_RS38165 PF00676 Dehydrogenase E1 component AFR_RS38165 PF16870 2-oxoglutarate dehydrogenase C-terminal AFR_RS38165 PF02779 Transketolase, pyrimidine binding domain AFR_RS38180 PF00005 ABC transporter AFR_RS38180 PF00664 ABC transporter transmembrane region AFR_RS38185 PF00005 ABC transporter AFR_RS38185 PF00664 ABC transporter transmembrane region AFR_RS38190 PF07085 DRTGG domain AFR_RS38190 PF01515 Phosphate acetyl/butaryl transferase AFR_RS38195 PF00871 Acetokinase family AFR_RS38210 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS38210 PF00107 Zinc-binding dehydrogenase AFR_RS38215 PF00390 Malic enzyme, N-terminal domain AFR_RS38215 PF03949 Malic enzyme, NAD binding domain AFR_RS38225 PF09055 Nickel-containing superoxide dismutase AFR_RS38235 PF13581 Histidine kinase-like ATPase domain AFR_RS38240 PF07702 UTRA domain AFR_RS38240 PF00392 Bacterial regulatory proteins, gntR family AFR_RS38250 PF00781 Diacylglycerol kinase catalytic domain AFR_RS38255 PF02467 Transcription factor WhiB AFR_RS38265 PF01507 Phosphoadenosine phosphosulfate reductase family AFR_RS38270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFR_RS38270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFR_RS38285 PF07568 Histidine kinase AFR_RS38285 PF12282 Signal transduction histidine kinase AFR_RS38285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS38290 PF01380 SIS domain AFR_RS38300 PF00364 Biotin-requiring enzyme AFR_RS38305 PF13490 Putative zinc-finger AFR_RS38310 PF08281 Sigma-70, region 4 AFR_RS38310 PF04542 Sigma-70 region 2 AFR_RS38325 PF02586 SOS response associated peptidase (SRAP) AFR_RS38330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFR_RS38335 PF03193 RsgA GTPase AFR_RS38340 PF00459 Inositol monophosphatase family AFR_RS38360 PF00072 Response regulator receiver domain AFR_RS38360 PF00196 Bacterial regulatory proteins, luxR family AFR_RS38380 PF00722 Glycosyl hydrolases family 16 AFR_RS38385 PF00905 Penicillin binding protein transpeptidase domain AFR_RS38385 PF00912 Transglycosylase AFR_RS38390 PF01374 Glycosyl hydrolase family 46 AFR_RS38400 PF02446 4-alpha-glucanotransferase AFR_RS38450 PF03176 MMPL family AFR_RS38455 PF03741 Integral membrane protein TerC family AFR_RS38465 PF00805 Pentapeptide repeats (8 copies) AFR_RS38485 PF00106 short chain dehydrogenase AFR_RS38505 PF03699 Uncharacterised protein family (UPF0182) AFR_RS38510 PF13180 PDZ domain AFR_RS38510 PF05362 Lon protease (S16) C-terminal proteolytic domain AFR_RS38535 PF03109 ABC1 family AFR_RS38540 PF02467 Transcription factor WhiB AFR_RS38550 PF13361 UvrD-like helicase C-terminal domain AFR_RS38550 PF00570 HRDC domain AFR_RS38550 PF00580 UvrD/REP helicase N-terminal domain AFR_RS38555 PF00462 Glutaredoxin AFR_RS38565 PF00072 Response regulator receiver domain AFR_RS38565 PF00196 Bacterial regulatory proteins, luxR family AFR_RS38580 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AFR_RS38585 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AFR_RS38585 PF00293 NUDIX domain AFR_RS38585 PF09297 NADH pyrophosphatase zinc ribbon domain AFR_RS38620 PF01522 Polysaccharide deacetylase AFR_RS38630 PF02082 Transcriptional regulator AFR_RS38640 PF00005 ABC transporter AFR_RS38645 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS38665 PF00313 'Cold-shock' DNA-binding domain AFR_RS38675 PF00580 UvrD/REP helicase N-terminal domain AFR_RS38675 PF13361 UvrD-like helicase C-terminal domain AFR_RS38680 PF13361 UvrD-like helicase C-terminal domain AFR_RS38680 PF00580 UvrD/REP helicase N-terminal domain AFR_RS38685 PF00356 Bacterial regulatory proteins, lacI family AFR_RS38695 PF03641 Possible lysine decarboxylase AFR_RS38700 PF03641 Possible lysine decarboxylase AFR_RS38705 PF01546 Peptidase family M20/M25/M40 AFR_RS38705 PF07687 Peptidase dimerisation domain AFR_RS38730 PF14602 Hexapeptide repeat of succinyl-transferase AFR_RS38730 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AFR_RS38735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS38735 PF03466 LysR substrate binding domain AFR_RS38740 PF01810 LysE type translocator AFR_RS38765 PF09278 MerR, DNA binding AFR_RS38765 PF00376 MerR family regulatory protein AFR_RS38770 PF01212 Beta-eliminating lyase AFR_RS38775 PF00248 Aldo/keto reductase family AFR_RS38780 PF08281 Sigma-70, region 4 AFR_RS38780 PF12680 SnoaL-like domain AFR_RS38780 PF04542 Sigma-70 region 2 AFR_RS38785 PF00106 short chain dehydrogenase AFR_RS38790 PF01022 Bacterial regulatory protein, arsR family AFR_RS38810 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS38815 PF12867 DinB superfamily AFR_RS38815 PF03781 Sulfatase-modifying factor enzyme 1 AFR_RS38825 PF10017 Histidine-specific methyltransferase, SAM-dependent AFR_RS38830 PF00596 Class II Aldolase and Adducin N-terminal domain AFR_RS38835 PF08281 Sigma-70, region 4 AFR_RS38835 PF12680 SnoaL-like domain AFR_RS38835 PF04542 Sigma-70 region 2 AFR_RS38875 PF00534 Glycosyl transferases group 1 AFR_RS38915 PF00248 Aldo/keto reductase family AFR_RS38925 PF05922 Peptidase inhibitor I9 AFR_RS38925 PF00082 Subtilase family AFR_RS38940 PF00155 Aminotransferase class I and II AFR_RS38945 PF00037 4Fe-4S binding domain AFR_RS38960 PF03466 LysR substrate binding domain AFR_RS38960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS38980 PF02585 GlcNAc-PI de-N-acetylase AFR_RS38985 PF00326 Prolyl oligopeptidase family AFR_RS38985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AFR_RS39020 PF00890 FAD binding domain AFR_RS39020 PF02910 Fumarate reductase flavoprotein C-term AFR_RS39025 PF13085 2Fe-2S iron-sulfur cluster binding domain AFR_RS39025 PF13183 4Fe-4S dicluster domain AFR_RS39060 PF00005 ABC transporter AFR_RS39060 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFR_RS39065 PF00005 ABC transporter AFR_RS39075 PF11862 Domain of unknown function (DUF3382) AFR_RS39075 PF02653 Branched-chain amino acid transport system / permease component AFR_RS39095 PF01636 Phosphotransferase enzyme family AFR_RS39100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS39100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS39100 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS39120 PF00196 Bacterial regulatory proteins, luxR family AFR_RS39135 PF01370 NAD dependent epimerase/dehydratase family AFR_RS39160 PF00535 Glycosyl transferase family 2 AFR_RS39165 PF03301 Tryptophan 2,3-dioxygenase AFR_RS39170 PF00107 Zinc-binding dehydrogenase AFR_RS39170 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS39175 PF00171 Aldehyde dehydrogenase family AFR_RS39180 PF00440 Bacterial regulatory proteins, tetR family AFR_RS39180 PF02909 Tetracyclin repressor-like, C-terminal domain AFR_RS39185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS39185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS39185 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS39190 PF00501 AMP-binding enzyme AFR_RS39190 PF13193 AMP-binding enzyme C-terminal domain AFR_RS39195 PF00293 NUDIX domain AFR_RS39215 PF00457 Glycosyl hydrolases family 11 AFR_RS39215 PF03422 Carbohydrate binding module (family 6) AFR_RS39220 PF00652 Ricin-type beta-trefoil lectin domain AFR_RS39220 PF02983 Alpha-lytic protease prodomain AFR_RS39250 PF03358 NADPH-dependent FMN reductase AFR_RS39280 PF07690 Major Facilitator Superfamily AFR_RS39315 PF06071 Protein of unknown function (DUF933) AFR_RS39315 PF01926 50S ribosome-binding GTPase AFR_RS39340 PF08241 Methyltransferase domain AFR_RS39345 PF02805 Metal binding domain of Ada AFR_RS39345 PF00730 HhH-GPD superfamily base excision DNA repair protein AFR_RS39345 PF12833 Helix-turn-helix domain AFR_RS39345 PF06029 AlkA N-terminal domain AFR_RS39350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFR_RS39350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFR_RS39370 PF08264 Anticodon-binding domain of tRNA AFR_RS39370 PF00133 tRNA synthetases class I (I, L, M and V) AFR_RS39385 PF02646 RmuC family AFR_RS39390 PF02401 LytB protein AFR_RS39405 PF02601 Exonuclease VII, large subunit AFR_RS39405 PF13742 OB-fold nucleic acid binding domain AFR_RS39410 PF02609 Exonuclease VII small subunit AFR_RS39420 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AFR_RS39430 PF01694 Rhomboid family AFR_RS39435 PF00089 Trypsin AFR_RS39445 PF13638 PIN domain AFR_RS39445 PF02562 PhoH-like protein AFR_RS39450 PF02358 Trehalose-phosphatase AFR_RS39455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS39455 PF03466 LysR substrate binding domain AFR_RS39460 PF01255 Putative undecaprenyl diphosphate synthase AFR_RS39480 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AFR_RS39480 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AFR_RS39485 PF04542 Sigma-70 region 2 AFR_RS39485 PF08281 Sigma-70, region 4 AFR_RS39515 PF01039 Carboxyl transferase domain AFR_RS39550 PF02545 Maf-like protein AFR_RS39560 PF00005 ABC transporter AFR_RS39560 PF13732 Domain of unknown function (DUF4162) AFR_RS39570 PF00289 Biotin carboxylase, N-terminal domain AFR_RS39570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS39570 PF00364 Biotin-requiring enzyme AFR_RS39570 PF02785 Biotin carboxylase C-terminal domain AFR_RS39585 PF01841 Transglutaminase-like superfamily AFR_RS39585 PF08379 Bacterial transglutaminase-like N-terminal region AFR_RS39595 PF04174 A circularly permuted ATPgrasp AFR_RS39605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS39605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFR_RS39630 PF12706 Beta-lactamase superfamily domain AFR_RS39640 PF01546 Peptidase family M20/M25/M40 AFR_RS39640 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFR_RS39645 PF01642 Methylmalonyl-CoA mutase AFR_RS39645 PF02310 B12 binding domain AFR_RS39650 PF00069 Protein kinase domain AFR_RS39650 PF03793 PASTA domain AFR_RS39655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFR_RS39655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFR_RS39655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFR_RS39655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFR_RS39670 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AFR_RS39685 PF01791 DeoC/LacD family aldolase AFR_RS39690 PF00171 Aldehyde dehydrogenase family AFR_RS39695 PF00171 Aldehyde dehydrogenase family AFR_RS39725 PF03259 Roadblock/LC7 domain AFR_RS39730 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS39730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS39730 PF08521 Two-component sensor kinase N-terminal AFR_RS39735 PF00962 Adenosine/AMP deaminase AFR_RS39750 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AFR_RS39750 PF00591 Glycosyl transferase family, a/b domain AFR_RS39750 PF02885 Glycosyl transferase family, helical bundle domain AFR_RS39755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFR_RS39760 PF02653 Branched-chain amino acid transport system / permease component AFR_RS39765 PF02653 Branched-chain amino acid transport system / permease component AFR_RS39770 PF00005 ABC transporter AFR_RS39775 PF02608 ABC transporter substrate-binding protein PnrA-like AFR_RS39790 PF00440 Bacterial regulatory proteins, tetR family AFR_RS39810 PF00579 tRNA synthetases class I (W and Y) AFR_RS39815 PF01370 NAD dependent epimerase/dehydratase family AFR_RS39820 PF08544 GHMP kinases C terminal AFR_RS39820 PF00288 GHMP kinases N terminal domain AFR_RS39820 PF10509 Galactokinase galactose-binding signature AFR_RS39830 PF01022 Bacterial regulatory protein, arsR family AFR_RS39845 PF04616 Glycosyl hydrolases family 43 AFR_RS39845 PF16369 C-terminal lipocalin-like domain AFR_RS39850 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS39855 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS39860 PF13416 Bacterial extracellular solute-binding protein AFR_RS39865 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AFR_RS39870 PF00356 Bacterial regulatory proteins, lacI family AFR_RS39875 PF00009 Elongation factor Tu GTP binding domain AFR_RS39880 PF01507 Phosphoadenosine phosphosulfate reductase family AFR_RS39885 PF00459 Inositol monophosphatase family AFR_RS39890 PF02397 Bacterial sugar transferase AFR_RS39895 PF01195 Peptidyl-tRNA hydrolase AFR_RS39900 PF01386 Ribosomal L25p family AFR_RS39900 PF14693 Ribosomal protein TL5, C-terminal domain AFR_RS39905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFR_RS39905 PF14572 Phosphoribosyl synthetase-associated domain AFR_RS39910 PF12804 MobA-like NTP transferase domain AFR_RS39910 PF00132 Bacterial transferase hexapeptide (six repeats) AFR_RS39920 PF10503 Esterase PHB depolymerase AFR_RS39940 PF00561 alpha/beta hydrolase fold AFR_RS39945 PF00550 Phosphopantetheine attachment site AFR_RS39955 PF00698 Acyl transferase domain AFR_RS39955 PF14765 Polyketide synthase dehydratase AFR_RS39955 PF00550 Phosphopantetheine attachment site AFR_RS39955 PF08659 KR domain AFR_RS39955 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS39955 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS39955 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS39960 PF00440 Bacterial regulatory proteins, tetR family AFR_RS39975 PF00005 ABC transporter AFR_RS39975 PF12848 ABC transporter AFR_RS39975 PF16326 ABC transporter C-terminal domain AFR_RS39980 PF08544 GHMP kinases C terminal AFR_RS39980 PF00288 GHMP kinases N terminal domain AFR_RS39990 PF00398 Ribosomal RNA adenine dimethylase AFR_RS40000 PF01026 TatD related DNase AFR_RS40020 PF09334 tRNA synthetases class I (M) AFR_RS40030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS40035 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AFR_RS40035 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AFR_RS40045 PF01522 Polysaccharide deacetylase AFR_RS40060 PF00149 Calcineurin-like phosphoesterase AFR_RS40095 PF03453 MoeA N-terminal region (domain I and II) AFR_RS40095 PF00994 Probable molybdopterin binding domain AFR_RS40095 PF03454 MoeA C-terminal region (domain IV) AFR_RS40100 PF00483 Nucleotidyl transferase AFR_RS40105 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS40110 PF01812 5-formyltetrahydrofolate cyclo-ligase family AFR_RS40140 PF01475 Ferric uptake regulator family AFR_RS40160 PF01914 MarC family integral membrane protein AFR_RS40165 PF02811 PHP domain AFR_RS40185 PF00085 Thioredoxin AFR_RS40190 PF04055 Radical SAM superfamily AFR_RS40190 PF04055 Radical SAM superfamily AFR_RS40235 PF02567 Phenazine biosynthesis-like protein AFR_RS40240 PF01769 Divalent cation transporter AFR_RS40240 PF03448 MgtE intracellular N domain AFR_RS40240 PF00571 CBS domain AFR_RS40250 PF10609 NUBPL iron-transfer P-loop NTPase AFR_RS40250 PF01883 Iron-sulfur cluster assembly protein AFR_RS40255 PF02416 mttA/Hcf106 family AFR_RS40260 PF13180 PDZ domain AFR_RS40265 PF01596 O-methyltransferase AFR_RS40270 PF00883 Cytosol aminopeptidase family, catalytic domain AFR_RS40270 PF02789 Cytosol aminopeptidase family, N-terminal domain AFR_RS40280 PF00378 Enoyl-CoA hydratase/isomerase AFR_RS40285 PF00089 Trypsin AFR_RS40295 PF13673 Acetyltransferase (GNAT) domain AFR_RS40295 PF00958 GMP synthase C terminal domain AFR_RS40295 PF00117 Glutamine amidotransferase class-I AFR_RS40295 PF03352 Methyladenine glycosylase AFR_RS40295 PF13302 Acetyltransferase (GNAT) domain AFR_RS40310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFR_RS40315 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AFR_RS40315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AFR_RS40315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AFR_RS40320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFR_RS40325 PF07885 Ion channel AFR_RS40325 PF02254 TrkA-N domain AFR_RS40335 PF00196 Bacterial regulatory proteins, luxR family AFR_RS40360 PF00490 Delta-aminolevulinic acid dehydratase AFR_RS40365 PF14824 Sirohaem biosynthesis protein central AFR_RS40365 PF10414 Sirohaem synthase dimerisation region AFR_RS40365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFR_RS40370 PF03900 Porphobilinogen deaminase, C-terminal domain AFR_RS40370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AFR_RS40375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AFR_RS40375 PF01488 Shikimate / quinate 5-dehydrogenase AFR_RS40375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AFR_RS40380 PF02629 CoA binding domain AFR_RS40380 PF06971 Putative DNA-binding protein N-terminus AFR_RS40390 PF05768 Glutaredoxin-like domain (DUF836) AFR_RS40395 PF00501 AMP-binding enzyme AFR_RS40395 PF13193 AMP-binding enzyme C-terminal domain AFR_RS40400 PF08281 Sigma-70, region 4 AFR_RS40400 PF04542 Sigma-70 region 2 AFR_RS40410 PF01553 Acyltransferase AFR_RS40415 PF01370 NAD dependent epimerase/dehydratase family AFR_RS40420 PF12728 Helix-turn-helix domain AFR_RS40425 PF01619 Proline dehydrogenase AFR_RS40435 PF01261 Xylose isomerase-like TIM barrel AFR_RS40445 PF00704 Glycosyl hydrolases family 18 AFR_RS40445 PF00553 Cellulose binding domain AFR_RS40445 PF00041 Fibronectin type III domain AFR_RS40460 PF00106 short chain dehydrogenase AFR_RS40465 PF00486 Transcriptional regulatory protein, C terminal AFR_RS40465 PF00072 Response regulator receiver domain AFR_RS40470 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS40470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS40475 PF01895 PhoU domain AFR_RS40480 PF00300 Histidine phosphatase superfamily (branch 1) AFR_RS40490 PF01584 CheW-like domain AFR_RS40495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS40495 PF13426 PAS domain AFR_RS40495 PF08447 PAS fold AFR_RS40500 PF00083 Sugar (and other) transporter AFR_RS40505 PF10722 Putative bacterial sensory transduction regulator AFR_RS40510 PF00534 Glycosyl transferases group 1 AFR_RS40510 PF13439 Glycosyltransferase Family 4 AFR_RS40515 PF00106 short chain dehydrogenase AFR_RS40530 PF00072 Response regulator receiver domain AFR_RS40530 PF00486 Transcriptional regulatory protein, C terminal AFR_RS40535 PF05922 Peptidase inhibitor I9 AFR_RS40535 PF00082 Subtilase family AFR_RS40545 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS40545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS40545 PF00672 HAMP domain AFR_RS40565 PF01464 Transglycosylase SLT domain AFR_RS40565 PF01551 Peptidase family M23 AFR_RS40565 PF10145 Phage-related minor tail protein AFR_RS40570 PF02599 Global regulator protein family AFR_RS40575 PF02623 FliW protein AFR_RS40580 PF00700 Bacterial flagellin C-terminal helical region AFR_RS40580 PF00669 Bacterial flagellin N-terminal helical region AFR_RS40585 PF00460 Flagella basal body rod protein AFR_RS40585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFR_RS40595 PF00700 Bacterial flagellin C-terminal helical region AFR_RS40595 PF00669 Bacterial flagellin N-terminal helical region AFR_RS40605 PF02561 Flagellar protein FliS AFR_RS40615 PF00460 Flagella basal body rod protein AFR_RS40620 PF00460 Flagella basal body rod protein AFR_RS40620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFR_RS40625 PF02049 Flagellar hook-basal body complex protein FliE AFR_RS40630 PF01514 Secretory protein of YscJ/FliF family AFR_RS40630 PF08345 Flagellar M-ring protein C-terminal AFR_RS40635 PF14842 FliG N-terminal domain AFR_RS40635 PF14841 FliG middle domain AFR_RS40635 PF01706 FliG C-terminal domain AFR_RS40645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFR_RS40645 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFR_RS40645 PF18269 T3SS EscN ATPase C-terminal domain AFR_RS40655 PF10145 Phage-related minor tail protein AFR_RS40655 PF01551 Peptidase family M23 AFR_RS40655 PF01464 Transglycosylase SLT domain AFR_RS40670 PF03963 Flagellar hook capping protein - N-terminal region AFR_RS40670 PF13861 FlgD Tudor-like domain AFR_RS40670 PF13860 FlgD Ig-like domain AFR_RS40675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFR_RS40675 PF00460 Flagella basal body rod protein AFR_RS40675 PF07559 Flagellar basal body protein FlaE AFR_RS40685 PF01618 MotA/TolQ/ExbB proton channel family AFR_RS40690 PF00691 OmpA family AFR_RS40690 PF13677 Membrane MotB of proton-channel complex MotA/MotB AFR_RS40700 PF02154 Flagellar motor switch protein FliM AFR_RS40700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AFR_RS40705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AFR_RS40705 PF04509 CheC-like family AFR_RS40715 PF00813 FliP family AFR_RS40720 PF01311 Bacterial export proteins, family 1 AFR_RS40725 PF01312 FlhB HrpN YscU SpaS Family AFR_RS40730 PF00771 FHIPEP family AFR_RS40745 PF01594 AI-2E family transporter AFR_RS40760 PF00072 Response regulator receiver domain AFR_RS40770 PF00072 Response regulator receiver domain AFR_RS40775 PF03705 CheR methyltransferase, all-alpha domain AFR_RS40775 PF01739 CheR methyltransferase, SAM binding domain AFR_RS40780 PF00072 Response regulator receiver domain AFR_RS40780 PF01339 CheB methylesterase AFR_RS40790 PF01584 CheW-like domain AFR_RS40795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS40795 PF00072 Response regulator receiver domain AFR_RS40795 PF01627 Hpt domain AFR_RS40795 PF01584 CheW-like domain AFR_RS40795 PF02895 Signal transducing histidine kinase, homodimeric domain AFR_RS40800 PF00072 Response regulator receiver domain AFR_RS40800 PF00486 Transcriptional regulatory protein, C terminal AFR_RS40805 PF00989 PAS fold AFR_RS40805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS40805 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS40805 PF13188 PAS domain AFR_RS40815 PF01565 FAD binding domain AFR_RS40815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AFR_RS40825 PF00232 Glycosyl hydrolase family 1 AFR_RS40830 PF00356 Bacterial regulatory proteins, lacI family AFR_RS40835 PF01661 Macro domain AFR_RS40870 PF01381 Helix-turn-helix AFR_RS40880 PF05853 beta-keto acid cleavage enzyme AFR_RS40885 PF01571 Aminomethyltransferase folate-binding domain AFR_RS40890 PF01475 Ferric uptake regulator family AFR_RS40895 PF01063 Amino-transferase class IV AFR_RS40900 PF08768 Domain of unknown function (DUF1794) AFR_RS40925 PF07210 Protein of unknown function (DUF1416) AFR_RS40930 PF00581 Rhodanese-like domain AFR_RS40945 PF00486 Transcriptional regulatory protein, C terminal AFR_RS40950 PF13508 Acetyltransferase (GNAT) domain AFR_RS40950 PF00583 Acetyltransferase (GNAT) family AFR_RS40960 PF07690 Major Facilitator Superfamily AFR_RS40965 PF12849 PBP superfamily domain AFR_RS40970 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS40975 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS40980 PF00005 ABC transporter AFR_RS40990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFR_RS40990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFR_RS40995 PF01384 Phosphate transporter family AFR_RS41010 PF04542 Sigma-70 region 2 AFR_RS41010 PF08281 Sigma-70, region 4 AFR_RS41010 PF12680 SnoaL-like domain AFR_RS41020 PF13307 Helicase C-terminal domain AFR_RS41025 PF01594 AI-2E family transporter AFR_RS41035 PF13847 Methyltransferase domain AFR_RS41040 PF13367 PrsW family intramembrane metalloprotease AFR_RS41060 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AFR_RS41060 PF01266 FAD dependent oxidoreductase AFR_RS41065 PF00578 AhpC/TSA family AFR_RS41085 PF00118 TCP-1/cpn60 chaperonin family AFR_RS41100 PF00583 Acetyltransferase (GNAT) family AFR_RS41105 PF00291 Pyridoxal-phosphate dependent enzyme AFR_RS41110 PF00005 ABC transporter AFR_RS41125 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS41125 PF17862 AAA+ lid domain AFR_RS41125 PF01434 Peptidase family M41 AFR_RS41135 PF00005 ABC transporter AFR_RS41175 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AFR_RS41180 PF00672 HAMP domain AFR_RS41180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS41180 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS41185 PF00486 Transcriptional regulatory protein, C terminal AFR_RS41185 PF00072 Response regulator receiver domain AFR_RS41195 PF00535 Glycosyl transferase family 2 AFR_RS41200 PF00534 Glycosyl transferases group 1 AFR_RS41200 PF13439 Glycosyltransferase Family 4 AFR_RS41215 PF00455 DeoR C terminal sensor domain AFR_RS41215 PF08220 DeoR-like helix-turn-helix domain AFR_RS41225 PF00480 ROK family AFR_RS41230 PF01979 Amidohydrolase family AFR_RS41265 PF00082 Subtilase family AFR_RS41290 PF17912 MalK OB fold domain AFR_RS41290 PF00005 ABC transporter AFR_RS41295 PF00012 Hsp70 protein AFR_RS41300 PF00588 SpoU rRNA Methylase family AFR_RS41300 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFR_RS41305 PF01406 tRNA synthetases class I (C) catalytic domain AFR_RS41305 PF09190 DALR domain AFR_RS41315 PF00082 Subtilase family AFR_RS41320 PF10415 Fumarase C C-terminus AFR_RS41320 PF00206 Lyase AFR_RS41340 PF05681 Fumarate hydratase (Fumerase) AFR_RS41340 PF05683 Fumarase C-terminus AFR_RS41355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFR_RS41360 PF06271 RDD family AFR_RS41370 PF00155 Aminotransferase class I and II AFR_RS41375 PF02687 FtsX-like permease family AFR_RS41375 PF12704 MacB-like periplasmic core domain AFR_RS41380 PF00005 ABC transporter AFR_RS41385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS41385 PF07730 Histidine kinase AFR_RS41390 PF00196 Bacterial regulatory proteins, luxR family AFR_RS41390 PF00072 Response regulator receiver domain AFR_RS41395 PF07690 Major Facilitator Superfamily AFR_RS41410 PF13360 PQQ-like domain AFR_RS41410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AFR_RS41440 PF00480 ROK family AFR_RS41445 PF01547 Bacterial extracellular solute-binding protein AFR_RS41450 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS41455 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS41460 PF11975 Family 4 glycosyl hydrolase C-terminal domain AFR_RS41460 PF02056 Family 4 glycosyl hydrolase AFR_RS41480 PF02542 YgbB family AFR_RS41485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AFR_RS41490 PF02559 CarD-like/TRCF domain AFR_RS41505 PF00195 Chalcone and stilbene synthases, N-terminal domain AFR_RS41505 PF02797 Chalcone and stilbene synthases, C-terminal domain AFR_RS41510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFR_RS41510 PF02770 Acyl-CoA dehydrogenase, middle domain AFR_RS41510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS41515 PF08241 Methyltransferase domain AFR_RS41530 PF06745 KaiC AFR_RS41530 PF18073 Rubredoxin metal binding domain AFR_RS41535 PF02457 DisA bacterial checkpoint controller nucleotide-binding AFR_RS41535 PF12826 Helix-hairpin-helix motif AFR_RS41535 PF10635 DisA bacterial checkpoint controller linker region AFR_RS41545 PF01327 Polypeptide deformylase AFR_RS41555 PF00730 HhH-GPD superfamily base excision DNA repair protein AFR_RS41555 PF10576 Iron-sulfur binding domain of endonuclease III AFR_RS41555 PF00633 Helix-hairpin-helix motif AFR_RS41565 PF02861 Clp amino terminal domain, pathogenicity island component AFR_RS41565 PF17871 AAA lid domain AFR_RS41565 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS41565 PF07724 AAA domain (Cdc48 subfamily) AFR_RS41565 PF10431 C-terminal, D2-small domain, of ClpB protein AFR_RS41570 PF11774 Lsr2 AFR_RS41575 PF01336 OB-fold nucleic acid binding domain AFR_RS41575 PF00152 tRNA synthetases class II (D, K and N) AFR_RS41580 PF03309 Type III pantothenate kinase AFR_RS41585 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFR_RS41585 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFR_RS41590 PF02910 Fumarate reductase flavoprotein C-term AFR_RS41590 PF00890 FAD binding domain AFR_RS41600 PF02569 Pantoate-beta-alanine ligase AFR_RS41615 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFR_RS41635 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS41640 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS41645 PF00571 CBS domain AFR_RS41645 PF00005 ABC transporter AFR_RS41670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AFR_RS41675 PF02152 Dihydroneopterin aldolase AFR_RS41680 PF00809 Pterin binding enzyme AFR_RS41710 PF01464 Transglycosylase SLT domain AFR_RS41710 PF01551 Peptidase family M23 AFR_RS41710 PF10145 Phage-related minor tail protein AFR_RS41725 PF01580 FtsK/SpoIIIE family AFR_RS41745 PF01227 GTP cyclohydrolase I AFR_RS41750 PF01434 Peptidase family M41 AFR_RS41750 PF00004 ATPase family associated with various cellular activities (AAA) AFR_RS41750 PF17862 AAA+ lid domain AFR_RS41755 PF00156 Phosphoribosyl transferase domain AFR_RS41760 PF01171 PP-loop family AFR_RS41760 PF09179 TilS substrate binding domain AFR_RS41770 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AFR_RS41775 PF00719 Inorganic pyrophosphatase AFR_RS41785 PF01580 FtsK/SpoIIIE family AFR_RS41790 PF00082 Subtilase family AFR_RS41795 PF02674 Colicin V production protein AFR_RS41800 PF00293 NUDIX domain AFR_RS41810 PF00730 HhH-GPD superfamily base excision DNA repair protein AFR_RS41810 PF10576 Iron-sulfur binding domain of endonuclease III AFR_RS41810 PF00633 Helix-hairpin-helix motif AFR_RS41815 PF09587 Bacterial capsule synthesis protein PGA_cap AFR_RS41820 PF13545 Crp-like helix-turn-helix domain AFR_RS41820 PF00027 Cyclic nucleotide-binding domain AFR_RS41825 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AFR_RS41830 PF02785 Biotin carboxylase C-terminal domain AFR_RS41830 PF00289 Biotin carboxylase, N-terminal domain AFR_RS41830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFR_RS41830 PF00364 Biotin-requiring enzyme AFR_RS41835 PF00069 Protein kinase domain AFR_RS41835 PF13191 AAA ATPase domain AFR_RS41840 PF00072 Response regulator receiver domain AFR_RS41840 PF00211 Adenylate and Guanylate cyclase catalytic domain AFR_RS41845 PF00753 Metallo-beta-lactamase superfamily AFR_RS41845 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFR_RS41860 PF02374 Anion-transporting ATPase AFR_RS41865 PF17886 HSP20-like domain found in ArsA AFR_RS41865 PF02374 Anion-transporting ATPase AFR_RS41870 PF02467 Transcription factor WhiB AFR_RS41875 PF17092 Penicillin-binding protein OB-like domain AFR_RS41875 PF00912 Transglycosylase AFR_RS41875 PF00905 Penicillin binding protein transpeptidase domain AFR_RS41880 PF09424 Yqey-like protein AFR_RS41905 PF07690 Major Facilitator Superfamily AFR_RS41915 PF00156 Phosphoribosyl transferase domain AFR_RS41925 PF00563 EAL domain AFR_RS41925 PF03707 Bacterial signalling protein N terminal repeat AFR_RS41925 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS41940 PF01590 GAF domain AFR_RS41940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS41950 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFR_RS41950 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFR_RS41955 PF00696 Amino acid kinase family AFR_RS41955 PF01842 ACT domain AFR_RS41955 PF13840 ACT domain AFR_RS41965 PF08502 LeuA allosteric (dimerisation) domain AFR_RS41965 PF00682 HMGL-like AFR_RS41980 PF00728 Glycosyl hydrolase family 20, catalytic domain AFR_RS41980 PF02838 Glycosyl hydrolase family 20, domain 2 AFR_RS41985 PF00005 ABC transporter AFR_RS41985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS41990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFR_RS41990 PF00005 ABC transporter AFR_RS41995 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS42000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFR_RS42005 PF00528 Binding-protein-dependent transport system inner membrane component AFR_RS42005 PF12911 N-terminal TM domain of oligopeptide transport permease C AFR_RS42010 PF02132 RecR protein AFR_RS42010 PF13662 Toprim domain AFR_RS42010 PF00633 Helix-hairpin-helix motif AFR_RS42015 PF02575 YbaB/EbfC DNA-binding family AFR_RS42020 PF12169 DNA polymerase III subunits gamma and tau domain III AFR_RS42075 PF02040 Arsenical pump membrane protein AFR_RS42100 PF01048 Phosphorylase superfamily AFR_RS42105 PF14437 MafB19-like deaminase AFR_RS42130 PF02153 Prephenate dehydrogenase AFR_RS42135 PF04978 Protein of unknown function (DUF664) AFR_RS42140 PF01008 Initiation factor 2 subunit family AFR_RS42140 PF00596 Class II Aldolase and Adducin N-terminal domain AFR_RS42145 PF02811 PHP domain AFR_RS42145 PF14716 Helix-hairpin-helix domain AFR_RS42145 PF14791 DNA polymerase beta thumb AFR_RS42160 PF08521 Two-component sensor kinase N-terminal AFR_RS42160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS42160 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS42185 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFR_RS42185 PF05491 RuvB C-terminal winged helix domain AFR_RS42185 PF17864 RuvB AAA lid domain AFR_RS42205 PF02350 UDP-N-acetylglucosamine 2-epimerase AFR_RS42225 PF01738 Dienelactone hydrolase family AFR_RS42230 PF00041 Fibronectin type III domain AFR_RS42230 PF00553 Cellulose binding domain AFR_RS42230 PF00704 Glycosyl hydrolases family 18 AFR_RS42245 PF07690 Major Facilitator Superfamily AFR_RS42250 PF01202 Shikimate kinase AFR_RS42255 PF07690 Major Facilitator Superfamily AFR_RS42265 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS42310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFR_RS42310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFR_RS42315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS42315 PF03466 LysR substrate binding domain AFR_RS42325 PF01259 SAICAR synthetase AFR_RS42340 PF00149 Calcineurin-like phosphoesterase AFR_RS42340 PF02872 5'-nucleotidase, C-terminal domain AFR_RS42365 PF00005 ABC transporter AFR_RS42370 PF00392 Bacterial regulatory proteins, gntR family AFR_RS42415 PF00175 Oxidoreductase NAD-binding domain AFR_RS42415 PF00970 Oxidoreductase FAD-binding domain AFR_RS42415 PF00111 2Fe-2S iron-sulfur cluster binding domain AFR_RS42420 PF01327 Polypeptide deformylase AFR_RS42440 PF01161 Phosphatidylethanolamine-binding protein AFR_RS42445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS42445 PF16736 Single Cache-like AFR_RS42445 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS42445 PF00989 PAS fold AFR_RS42455 PF13302 Acetyltransferase (GNAT) domain AFR_RS42460 PF00877 NlpC/P60 family AFR_RS42460 PF01476 LysM domain AFR_RS42460 PF08239 Bacterial SH3 domain AFR_RS42470 PF08281 Sigma-70, region 4 AFR_RS42470 PF04542 Sigma-70 region 2 AFR_RS42480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AFR_RS42485 PF03992 Antibiotic biosynthesis monooxygenase AFR_RS42495 PF09278 MerR, DNA binding AFR_RS42495 PF00376 MerR family regulatory protein AFR_RS42535 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS42535 PF08659 KR domain AFR_RS42535 PF00550 Phosphopantetheine attachment site AFR_RS42535 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS42535 PF00698 Acyl transferase domain AFR_RS42535 PF08240 Alcohol dehydrogenase GroES-like domain AFR_RS42535 PF00107 Zinc-binding dehydrogenase AFR_RS42535 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS42535 PF14765 Polyketide synthase dehydratase AFR_RS42555 PF00376 MerR family regulatory protein AFR_RS42555 PF09278 MerR, DNA binding AFR_RS42560 PF00456 Transketolase, thiamine diphosphate binding domain AFR_RS42565 PF02779 Transketolase, pyrimidine binding domain AFR_RS42580 PF00108 Thiolase, N-terminal domain AFR_RS42580 PF02803 Thiolase, C-terminal domain AFR_RS42595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFR_RS42610 PF01544 CorA-like Mg2+ transporter protein AFR_RS42615 PF00155 Aminotransferase class I and II AFR_RS42615 PF00392 Bacterial regulatory proteins, gntR family AFR_RS42620 PF00483 Nucleotidyl transferase AFR_RS42625 PF13685 Iron-containing alcohol dehydrogenase AFR_RS42640 PF13439 Glycosyltransferase Family 4 AFR_RS42645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFR_RS42645 PF06827 Zinc finger found in FPG and IleRS AFR_RS42650 PF02397 Bacterial sugar transferase AFR_RS42655 PF06580 Histidine kinase AFR_RS42655 PF07694 5TMR of 5TMR-LYT AFR_RS42660 PF04397 LytTr DNA-binding domain AFR_RS42660 PF00072 Response regulator receiver domain AFR_RS42665 PF00072 Response regulator receiver domain AFR_RS42665 PF00486 Transcriptional regulatory protein, C terminal AFR_RS42670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS42670 PF00672 HAMP domain AFR_RS42670 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS42685 PF00474 Sodium:solute symporter family AFR_RS42695 PF13732 Domain of unknown function (DUF4162) AFR_RS42695 PF00005 ABC transporter AFR_RS42705 PF00579 tRNA synthetases class I (W and Y) AFR_RS42720 PF00474 Sodium:solute symporter family AFR_RS42725 PF16363 GDP-mannose 4,6 dehydratase AFR_RS42730 PF03816 Cell envelope-related transcriptional attenuator domain AFR_RS42735 PF03816 Cell envelope-related transcriptional attenuator domain AFR_RS42740 PF00581 Rhodanese-like domain AFR_RS42745 PF03009 Glycerophosphoryl diester phosphodiesterase family AFR_RS42750 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS42750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS42750 PF16736 Single Cache-like AFR_RS42750 PF00989 PAS fold AFR_RS42790 PF01842 ACT domain AFR_RS42790 PF00800 Prephenate dehydratase AFR_RS42805 PF02566 OsmC-like protein AFR_RS42815 PF02403 Seryl-tRNA synthetase N-terminal domain AFR_RS42815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFR_RS42830 PF10759 Protein of unknown function (DUF2587) AFR_RS42865 PF02634 FdhD/NarQ family AFR_RS42870 PF16655 PhoD-like phosphatase, N-terminal domain AFR_RS42870 PF09423 PhoD-like phosphatase AFR_RS42890 PF04055 Radical SAM superfamily AFR_RS42890 PF06463 Molybdenum Cofactor Synthesis C AFR_RS42900 PF00149 Calcineurin-like phosphoesterase AFR_RS42905 PF13361 UvrD-like helicase C-terminal domain AFR_RS42905 PF00580 UvrD/REP helicase N-terminal domain AFR_RS42945 PF02391 MoaE protein AFR_RS42955 PF00994 Probable molybdopterin binding domain AFR_RS42955 PF01967 MoaC family AFR_RS42960 PF01967 MoaC family AFR_RS42965 PF00360 Phytochrome region AFR_RS42965 PF00563 EAL domain AFR_RS42965 PF01590 GAF domain AFR_RS42965 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43035 PF03796 DnaB-like helicase C terminal domain AFR_RS43035 PF00772 DnaB-like helicase N terminal domain AFR_RS43045 PF01281 Ribosomal protein L9, N-terminal domain AFR_RS43045 PF03948 Ribosomal protein L9, C-terminal domain AFR_RS43050 PF01084 Ribosomal protein S18 AFR_RS43055 PF00436 Single-strand binding protein family AFR_RS43060 PF01250 Ribosomal protein S6 AFR_RS43070 PF01261 Xylose isomerase-like TIM barrel AFR_RS43085 PF00905 Penicillin binding protein transpeptidase domain AFR_RS43085 PF00912 Transglycosylase AFR_RS43090 PF17249 Family of unknown function (DUF5318) AFR_RS43095 PF03551 Transcriptional regulator PadR-like family AFR_RS43100 PF01658 Myo-inositol-1-phosphate synthase AFR_RS43110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFR_RS43110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFR_RS43130 PF01743 Poly A polymerase head domain AFR_RS43130 PF13735 tRNA nucleotidyltransferase domain 2 putative AFR_RS43130 PF12627 Probable RNA and SrmB- binding site of polymerase A AFR_RS43140 PF03023 Lipid II flippase MurJ AFR_RS43145 PF00069 Protein kinase domain AFR_RS43145 PF03793 PASTA domain AFR_RS43150 PF04542 Sigma-70 region 2 AFR_RS43150 PF08281 Sigma-70, region 4 AFR_RS43160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFR_RS43165 PF00085 Thioredoxin AFR_RS43170 PF01471 Putative peptidoglycan binding domain AFR_RS43170 PF01520 N-acetylmuramoyl-L-alanine amidase AFR_RS43180 PF00155 Aminotransferase class I and II AFR_RS43185 PF07478 D-ala D-ala ligase C-terminus AFR_RS43185 PF01820 D-ala D-ala ligase N-terminus AFR_RS43195 PF02195 ParB-like nuclease domain AFR_RS43195 PF17762 HTH domain found in ParB protein AFR_RS43200 PF13614 AAA domain AFR_RS43205 PF02527 rRNA small subunit methyltransferase G AFR_RS43215 PF02096 60Kd inner membrane protein AFR_RS43220 PF00825 Ribonuclease P AFR_RS43225 PF00468 Ribosomal protein L34 AFR_RS43250 PF00672 HAMP domain AFR_RS43250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFR_RS43250 PF17200 Single Cache domain 2 AFR_RS43255 PF13439 Glycosyltransferase Family 4 AFR_RS43255 PF00534 Glycosyl transferases group 1 AFR_RS43260 PF13439 Glycosyltransferase Family 4 AFR_RS43260 PF00534 Glycosyl transferases group 1 AFR_RS43285 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43285 PF00563 EAL domain AFR_RS43285 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43315 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43315 PF13185 GAF domain AFR_RS43315 PF00563 EAL domain AFR_RS43380 PF00072 Response regulator receiver domain AFR_RS43380 PF00196 Bacterial regulatory proteins, luxR family AFR_RS43400 PF00082 Subtilase family AFR_RS43450 PF00155 Aminotransferase class I and II AFR_RS43500 PF09594 Glycosyltransferase family 87 AFR_RS43505 PF00720 Subtilisin inhibitor-like AFR_RS43540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS43540 PF08448 PAS fold AFR_RS43540 PF13426 PAS domain AFR_RS43540 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS43540 PF00072 Response regulator receiver domain AFR_RS43545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS43545 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS43545 PF08446 PAS fold AFR_RS43545 PF01590 GAF domain AFR_RS43545 PF00360 Phytochrome region AFR_RS43585 PF13649 Methyltransferase domain AFR_RS43600 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43600 PF00563 EAL domain AFR_RS43600 PF08495 FIST N domain AFR_RS43600 PF10442 FIST C domain AFR_RS43605 PF00563 EAL domain AFR_RS43605 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43605 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43665 PF09383 NIL domain AFR_RS43665 PF00005 ABC transporter AFR_RS43695 PF00360 Phytochrome region AFR_RS43695 PF01590 GAF domain AFR_RS43695 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS43695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS43695 PF08446 PAS fold AFR_RS43710 PF01433 Peptidase family M1 domain AFR_RS43710 PF11838 ERAP1-like C-terminal domain AFR_RS43720 PF14437 MafB19-like deaminase AFR_RS43745 PF00563 EAL domain AFR_RS43745 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43745 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43750 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43750 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43750 PF00563 EAL domain AFR_RS43775 PF00072 Response regulator receiver domain AFR_RS43775 PF00196 Bacterial regulatory proteins, luxR family AFR_RS43780 PF00931 NB-ARC domain AFR_RS43780 PF00486 Transcriptional regulatory protein, C terminal AFR_RS43780 PF03704 Bacterial transcriptional activator domain AFR_RS43785 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43785 PF13426 PAS domain AFR_RS43785 PF00563 EAL domain AFR_RS43815 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43815 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43815 PF00563 EAL domain AFR_RS43830 PF00082 Subtilase family AFR_RS43835 PF00196 Bacterial regulatory proteins, luxR family AFR_RS43835 PF00072 Response regulator receiver domain AFR_RS43845 PF00561 alpha/beta hydrolase fold AFR_RS43865 PF01590 GAF domain AFR_RS43865 PF00360 Phytochrome region AFR_RS43865 PF08446 PAS fold AFR_RS43865 PF00512 His Kinase A (phospho-acceptor) domain AFR_RS43865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS43890 PF00563 EAL domain AFR_RS43890 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43890 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43895 PF02156 Glycosyl hydrolase family 26 AFR_RS43895 PF00150 Cellulase (glycosyl hydrolase family 5) AFR_RS43895 PF03425 Carbohydrate binding domain (family 11) AFR_RS43895 PF00404 Dockerin type I domain AFR_RS43940 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS43940 PF00563 EAL domain AFR_RS43940 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43950 PF00012 Hsp70 protein AFR_RS43980 PF00404 Dockerin type I domain AFR_RS43980 PF00657 GDSL-like Lipase/Acylhydrolase AFR_RS43990 PF00563 EAL domain AFR_RS43990 PF03707 Bacterial signalling protein N terminal repeat AFR_RS43990 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44000 PF00400 WD domain, G-beta repeat AFR_RS44000 PF00069 Protein kinase domain AFR_RS44040 PF13191 AAA ATPase domain AFR_RS44040 PF00069 Protein kinase domain AFR_RS44065 PF07730 Histidine kinase AFR_RS44070 PF07730 Histidine kinase AFR_RS44070 PF13185 GAF domain AFR_RS44070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS44080 PF00400 WD domain, G-beta repeat AFR_RS44080 PF00069 Protein kinase domain AFR_RS44115 PF04607 Region found in RelA / SpoT proteins AFR_RS44115 PF02824 TGS domain AFR_RS44115 PF13291 ACT domain AFR_RS44125 PF07730 Histidine kinase AFR_RS44135 PF03466 LysR substrate binding domain AFR_RS44135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFR_RS44170 PF03707 Bacterial signalling protein N terminal repeat AFR_RS44170 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44170 PF00563 EAL domain AFR_RS44180 PF00069 Protein kinase domain AFR_RS44185 PF08241 Methyltransferase domain AFR_RS44190 PF03707 Bacterial signalling protein N terminal repeat AFR_RS44190 PF00563 EAL domain AFR_RS44190 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44210 PF00294 pfkB family carbohydrate kinase AFR_RS44215 PF00583 Acetyltransferase (GNAT) family AFR_RS44225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS44225 PF07730 Histidine kinase AFR_RS44225 PF00672 HAMP domain AFR_RS44235 PF03707 Bacterial signalling protein N terminal repeat AFR_RS44235 PF00563 EAL domain AFR_RS44235 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44245 PF01406 tRNA synthetases class I (C) catalytic domain AFR_RS44245 PF09190 DALR domain AFR_RS44265 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44265 PF03707 Bacterial signalling protein N terminal repeat AFR_RS44265 PF00563 EAL domain AFR_RS44270 PF03707 Bacterial signalling protein N terminal repeat AFR_RS44270 PF00563 EAL domain AFR_RS44270 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44275 PF13472 GDSL-like Lipase/Acylhydrolase family AFR_RS44330 PF07730 Histidine kinase AFR_RS44340 PF02622 Uncharacterized ACR, COG1678 AFR_RS44345 PF13439 Glycosyltransferase Family 4 AFR_RS44360 PF00990 Diguanylate cyclase, GGDEF domain AFR_RS44375 PF07730 Histidine kinase AFR_RS44375 PF00672 HAMP domain AFR_RS44375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFR_RS44390 PF00069 Protein kinase domain AFR_RS44395 PF00550 Phosphopantetheine attachment site AFR_RS44395 PF00109 Beta-ketoacyl synthase, N-terminal domain AFR_RS44395 PF14765 Polyketide synthase dehydratase AFR_RS44395 PF16197 Ketoacyl-synthetase C-terminal extension AFR_RS44395 PF00698 Acyl transferase domain AFR_RS44395 PF02801 Beta-ketoacyl synthase, C-terminal domain AFR_RS44395 PF08659 KR domain AFR_RS44425 PF01374 Glycosyl hydrolase family 46 AFR_RS44430 PF08534 Redoxin