locus-tag	class	description
AMIS_RS00010	COG0592	DNA-directed DNA polymerase activity
AMIS_RS00015	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AMIS_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMIS_RS00025	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
AMIS_RS00040	COG0187	DNA topoisomerase II activity
AMIS_RS00045	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMIS_RS00085	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AMIS_RS00100	COG0442	prolyl-tRNA aminoacylation
AMIS_RS00115	COG0326	Molecular chaperone. Has ATPase activity
AMIS_RS00130	COG0439	Biotin carboxylase
AMIS_RS00135	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS00150	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMIS_RS00155	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS00160	COG1846	Transcriptional regulator
AMIS_RS00165	COG2353	YceI-like domain
AMIS_RS00215	COG1716	ATPase activity
AMIS_RS00215	COG1716	ATPase activity
AMIS_RS00220	COG1716	ATPase activity
AMIS_RS00235	COG0768	penicillin binding
AMIS_RS00240	COG0515	serine threonine protein kinase
AMIS_RS00245	COG0515	serine threonine protein kinase
AMIS_RS00245	COG2815	serine threonine protein kinase
AMIS_RS00275	COG0247	lactate metabolic process
AMIS_RS00275	COG2181	nitrate reductase activity
AMIS_RS00310	COG0717	Belongs to the dCTP deaminase family
AMIS_RS00330	COG2770	Histidine kinase
AMIS_RS00330	COG2208	phosphoserine phosphatase activity
AMIS_RS00335	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS00360	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AMIS_RS00365	COG1984	allophanate hydrolase subunit 2
AMIS_RS00385	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMIS_RS00390	COG0022	dehydrogenase e1 component
AMIS_RS00420	COG0443	Heat shock 70 kDa protein
AMIS_RS00425	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMIS_RS00430	COG0484	heat shock protein binding
AMIS_RS00435	COG0789	Transcriptional regulator
AMIS_RS00455	COG2814	Major facilitator Superfamily
AMIS_RS00460	COG0542	response to heat
AMIS_RS00480	COG0640	Transcriptional regulator
AMIS_RS00490	COG0586	Pfam SNARE associated Golgi protein
AMIS_RS00495	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AMIS_RS00555	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMIS_RS00560	COG0151	Belongs to the GarS family
AMIS_RS00575	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMIS_RS00585	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMIS_RS00590	COG0047	phosphoribosylformylglycinamidine synthase activity
AMIS_RS00595	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMIS_RS00615	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AMIS_RS00620	COG0641	radical SAM
AMIS_RS00660	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
AMIS_RS00745	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AMIS_RS00755	COG0142	geranyltranstransferase activity
AMIS_RS00770	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMIS_RS00815	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS00830	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS00860	COG1970	mechanosensitive ion channel activity
AMIS_RS00870	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS00875	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS00880	COG2172	sigma factor antagonist activity
AMIS_RS00895	COG0745	RESPONSE REGULATOR receiver
AMIS_RS00905	COG1136	(ABC) transporter
AMIS_RS00925	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMIS_RS00930	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMIS_RS00945	COG0745	RESPONSE REGULATOR receiver
AMIS_RS00960	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS00965	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AMIS_RS00970	COG0406	alpha-ribazole phosphatase activity
AMIS_RS00975	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMIS_RS00985	COG1333	cytochrome c biogenesis protein
AMIS_RS00990	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMIS_RS01000	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AMIS_RS01010	COG1595	DNA-templated transcription, initiation
AMIS_RS01020	COG0163	prenyltransferase activity
AMIS_RS01040	COG0513	Belongs to the DEAD box helicase family
AMIS_RS01060	COG3883	PFAM NLP P60 protein
AMIS_RS01060	COG0791	NLP P60 protein
AMIS_RS01065	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMIS_RS01080	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AMIS_RS01085	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS01090	COG1120	ATPase activity
AMIS_RS01095	COG1987	bacterial-type flagellum assembly
AMIS_RS01110	COG3973	AAA domain
AMIS_RS01125	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
AMIS_RS01130	COG0667	Aldo Keto reductase
AMIS_RS01135	COG4279	zinc finger
AMIS_RS01140	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMIS_RS01145	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMIS_RS01155	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS01410	COG2226	methyltransferase
AMIS_RS01430	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS01435	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS01440	COG0649	NAD binding
AMIS_RS01455	COG1034	ATP synthesis coupled electron transport
AMIS_RS01460	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMIS_RS01465	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS01475	COG0713	ATP synthesis coupled electron transport
AMIS_RS01490	COG1007	ATP synthesis coupled electron transport
AMIS_RS01495	COG0142	geranyltranstransferase activity
AMIS_RS01520	COG1950	PFAM Membrane protein of
AMIS_RS01555	COG0596	Alpha beta hydrolase
AMIS_RS01570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMIS_RS01590	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS01630	COG1205	dead DEAH box helicase
AMIS_RS01630	COG1111	helicase
AMIS_RS01635	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS01645	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AMIS_RS01660	COG1754	DNA topoisomerase type I activity
AMIS_RS01660	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMIS_RS01670	COG1309	transcriptional regulator
AMIS_RS01680	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMIS_RS01685	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMIS_RS01710	COG1774	PSP1 C-terminal conserved region
AMIS_RS01790	COG0693	protein deglycase activity
AMIS_RS01805	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AMIS_RS01815	COG3285	dna ligase
AMIS_RS01815	COG1793	dna ligase
AMIS_RS01845	COG0133	tryptophan synthase activity
AMIS_RS01850	COG0159	tryptophan synthase activity
AMIS_RS01855	COG2188	Transcriptional regulator
AMIS_RS01860	COG1061	Type III restriction enzyme res subunit
AMIS_RS01875	COG0546	phosphoglycolate phosphatase activity
AMIS_RS01880	COG1278	Cold shock
AMIS_RS01885	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
AMIS_RS01900	COG2723	6-phospho-beta-galactosidase activity
AMIS_RS01915	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMIS_RS01920	COG2814	Major facilitator Superfamily
AMIS_RS01935	COG2252	PERMEase
AMIS_RS01940	COG1846	Transcriptional regulator
AMIS_RS01945	COG2814	Major facilitator Superfamily
AMIS_RS01965	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AMIS_RS01975	COG0259	pyridoxamine-phosphate oxidase activity
AMIS_RS01985	COG2017	converts alpha-aldose to the beta-anomer
AMIS_RS02015	COG3842	ATPase activity
AMIS_RS02045	COG1134	teichoic acid transport
AMIS_RS02045	COG1388	LysM domain
AMIS_RS02055	COG1309	transcriptional regulator
AMIS_RS02095	COG0745	RESPONSE REGULATOR receiver
AMIS_RS02110	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
AMIS_RS02125	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMIS_RS02130	COG1086	Polysaccharide biosynthesis protein
AMIS_RS02170	COG2197	response regulator
AMIS_RS02180	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMIS_RS02185	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMIS_RS02240	COG2089	acid synthase
AMIS_RS02250	COG1216	Glycosyl transferase, family 2
AMIS_RS02255	COG5001	Diguanylate cyclase
AMIS_RS02255	COG3300	MHYT domain
AMIS_RS02270	COG0596	Alpha beta hydrolase
AMIS_RS02275	COG2119	membrane
AMIS_RS02290	COG0251	oxidation-reduction process
AMIS_RS02330	COG0586	Pfam SNARE associated Golgi protein
AMIS_RS02360	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMIS_RS02365	COG1609	Transcriptional regulator
AMIS_RS02400	COG1309	transcriptional regulator
AMIS_RS02405	COG1131	(ABC) transporter
AMIS_RS02410	COG3559	Exporter of polyketide antibiotics
AMIS_RS02415	COG0025	NhaP-type Na H and K H
AMIS_RS02425	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMIS_RS02450	COG1088	dTDP-glucose 4,6-dehydratase activity
AMIS_RS02460	COG2814	Major facilitator Superfamily
AMIS_RS02465	COG0673	inositol 2-dehydrogenase activity
AMIS_RS02505	COG3268	Saccharopine dehydrogenase
AMIS_RS02510	COG1388	LysM domain
AMIS_RS02520	COG0583	DNA-binding transcription factor activity
AMIS_RS02565	COG4251	negative regulation of phosphorylation
AMIS_RS02575	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMIS_RS02580	COG2188	Transcriptional regulator
AMIS_RS02585	COG4085	toxin activity
AMIS_RS02585	COG1525	nuclease
AMIS_RS02585	COG0737	Belongs to the 5'-nucleotidase family
AMIS_RS02595	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMIS_RS02600	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMIS_RS02605	COG2205	protein histidine kinase activity
AMIS_RS02610	COG0745	RESPONSE REGULATOR receiver
AMIS_RS02620	COG1193	negative regulation of DNA recombination
AMIS_RS02635	COG0745	RESPONSE REGULATOR receiver
AMIS_RS02640	COG4251	negative regulation of phosphorylation
AMIS_RS02645	COG0784	Response regulator, receiver
AMIS_RS02650	COG0483	inositol monophosphate 1-phosphatase activity
AMIS_RS02655	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS02675	COG0515	serine threonine protein kinase
AMIS_RS02675	COG2815	serine threonine protein kinase
AMIS_RS02695	COG0514	ATP-dependent DNA helicase (RecQ)
AMIS_RS02725	COG0513	Belongs to the DEAD box helicase family
AMIS_RS02775	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AMIS_RS02780	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMIS_RS02790	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AMIS_RS02825	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS02830	COG0181	hydroxymethylbilane synthase activity
AMIS_RS02850	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS02855	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMIS_RS02860	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS02865	COG0839	Belongs to the complex I subunit 6 family
AMIS_RS02870	COG0713	ATP synthesis coupled electron transport
AMIS_RS02875	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AMIS_RS02885	COG1007	ATP synthesis coupled electron transport
AMIS_RS02900	COG0501	Belongs to the peptidase M48B family
AMIS_RS02905	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS02940	COG1666	GTP binding
AMIS_RS02960	COG3300	MHYT domain
AMIS_RS02960	COG5001	Diguanylate cyclase
AMIS_RS02975	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AMIS_RS02980	COG2030	dehydratase
AMIS_RS02995	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMIS_RS03005	COG0081	regulation of translation
AMIS_RS03025	COG0222	ribosome binding
AMIS_RS03030	COG0085	RNA polymerase activity
AMIS_RS03035	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMIS_RS03050	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMIS_RS03055	COG0049	tRNA binding
AMIS_RS03060	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMIS_RS03065	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMIS_RS03070	COG0051	transcription antitermination factor activity, RNA binding
AMIS_RS03075	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMIS_RS03080	COG0088	Forms part of the polypeptide exit tunnel
AMIS_RS03085	COG0089	rRNA binding
AMIS_RS03090	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMIS_RS03095	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMIS_RS03100	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMIS_RS03105	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMIS_RS03110	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMIS_RS03115	COG0255	Belongs to the universal ribosomal protein uL29 family
AMIS_RS03120	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMIS_RS03125	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMIS_RS03130	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMIS_RS03135	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMIS_RS03140	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMIS_RS03145	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMIS_RS03150	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMIS_RS03155	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMIS_RS03160	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMIS_RS03165	COG1841	ribosomal large subunit assembly
AMIS_RS03170	COG0200	Binds to the 23S rRNA
AMIS_RS03180	COG0563	adenylate kinase activity
AMIS_RS03195	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMIS_RS03200	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AMIS_RS03205	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMIS_RS03210	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMIS_RS03215	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMIS_RS03225	COG0203	ribosomal protein L17
AMIS_RS03230	COG0101	tRNA pseudouridine synthase activity
AMIS_RS03245	COG0488	(ABC) transporter
AMIS_RS03250	COG0352	thiamine-phosphate diphosphorylase activity
AMIS_RS03255	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS03255	COG2022	thiamine diphosphate biosynthetic process
AMIS_RS03265	COG2022	thiamine diphosphate biosynthetic process
AMIS_RS03270	COG0352	thiamine-phosphate diphosphorylase activity
AMIS_RS03275	COG0351	phosphomethylpyrimidine kinase
AMIS_RS03280	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AMIS_RS03315	COG2018	Roadblock/LC7 domain
AMIS_RS03335	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMIS_RS03340	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AMIS_RS03345	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMIS_RS03360	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMIS_RS03375	COG0736	holo-[acyl-carrier-protein] synthase activity
AMIS_RS03385	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMIS_RS03395	COG0802	atpase or kinase
AMIS_RS03400	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMIS_RS03405	COG1214	PFAM Peptidase M22, glycoprotease
AMIS_RS03405	COG0456	acetyltransferase
AMIS_RS03415	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMIS_RS03430	COG1132	(ABC) transporter
AMIS_RS03435	COG0459	protein refolding
AMIS_RS03440	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMIS_RS03450	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMIS_RS03465	COG4214	carbohydrate transport
AMIS_RS03490	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMIS_RS03500	COG2197	response regulator
AMIS_RS03515	COG0516	GMP reductase activity
AMIS_RS03525	COG1316	TRANSCRIPTIONal
AMIS_RS03535	COG0519	Catalyzes the synthesis of GMP from XMP
AMIS_RS03535	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMIS_RS03540	COG1051	belongs to the nudix hydrolase family
AMIS_RS03550	COG1183	phosphatidylcholine synthase activity
AMIS_RS03555	COG0688	phosphatidylethanolamine metabolic process
AMIS_RS03570	COG4585	Histidine kinase
AMIS_RS03575	COG2197	response regulator
AMIS_RS03585	COG0601	transmembrane transport
AMIS_RS03590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS03595	COG0444	Belongs to the ABC transporter superfamily
AMIS_RS03600	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS03605	COG1605	Chorismate mutase
AMIS_RS03610	COG1525	nuclease
AMIS_RS03610	COG0737	Belongs to the 5'-nucleotidase family
AMIS_RS03610	COG4085	toxin activity
AMIS_RS03630	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS03635	COG0045	succinate-CoA ligase (ADP-forming) activity
AMIS_RS03660	COG0138	bifunctional purine biosynthesis protein purh
AMIS_RS03675	COG0538	isocitrate dehydrogenase activity
AMIS_RS03680	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS03680	COG1454	alcohol dehydrogenase
AMIS_RS03690	COG1349	DNA-binding transcription factor activity
AMIS_RS03750	COG0529	Catalyzes the synthesis of activated sulfate
AMIS_RS03760	COG1131	(ABC) transporter
AMIS_RS03785	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMIS_RS03840	COG0148	phosphopyruvate hydratase activity
AMIS_RS03855	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AMIS_RS03895	COG0714	Associated with various cellular activities
AMIS_RS03935	COG0183	Belongs to the thiolase family
AMIS_RS03940	COG2755	lipolytic protein G-D-S-L family
AMIS_RS03950	COG3339	Conserved Protein
AMIS_RS03975	COG1234	tRNA 3'-trailer cleavage
AMIS_RS03980	COG2326	polyphosphate kinase activity
AMIS_RS04020	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMIS_RS04040	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AMIS_RS04045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMIS_RS04055	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AMIS_RS04070	COG1331	Highly conserved protein containing a thioredoxin domain
AMIS_RS04085	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMIS_RS04100	COG1609	Transcriptional regulator
AMIS_RS04105	COG1414	Transcriptional regulator
AMIS_RS04115	COG2124	cytochrome p450
AMIS_RS04135	COG1609	Transcriptional regulator
AMIS_RS04150	COG0395	ABC-type sugar transport system, permease component
AMIS_RS04155	COG3250	beta-galactosidase activity
AMIS_RS04160	COG1609	Transcriptional regulator
AMIS_RS04210	COG1733	regulation of RNA biosynthetic process
AMIS_RS04220	COG1609	Transcriptional regulator
AMIS_RS04235	COG1473	amidohydrolase
AMIS_RS04240	COG0477	Major facilitator Superfamily
AMIS_RS04255	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMIS_RS04265	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS04280	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
AMIS_RS04280	COG0778	Nitroreductase
AMIS_RS04285	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AMIS_RS04295	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMIS_RS04315	COG0726	polysaccharide deacetylase
AMIS_RS04325	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS04335	COG1515	deoxyribonuclease V activity
AMIS_RS04340	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMIS_RS04345	COG2835	tetraacyldisaccharide 4'-kinase activity
AMIS_RS04360	COG1482	cell wall glycoprotein biosynthetic process
AMIS_RS04365	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMIS_RS04380	COG0745	RESPONSE REGULATOR receiver
AMIS_RS04385	COG5002	protein histidine kinase activity
AMIS_RS04385	COG5000	phosphorelay sensor kinase activity
AMIS_RS04400	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMIS_RS04405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS04410	COG0653	protein targeting
AMIS_RS04440	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMIS_RS04445	COG2884	Cell division ATP-binding protein ftsE
AMIS_RS04450	COG2177	Part of the ABC transporter FtsEX involved in
AMIS_RS04455	COG0739	heme binding
AMIS_RS04455	COG0741	lytic transglycosylase activity
AMIS_RS04455	COG1196	nuclear chromosome segregation
AMIS_RS04460	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AMIS_RS04480	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS04480	COG3321	synthase
AMIS_RS04480	COG0604	alcohol dehydrogenase
AMIS_RS04500	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AMIS_RS04505	COG1678	Uncharacterized ACR, COG1678
AMIS_RS04535	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AMIS_RS04545	COG1459	type II secretion system
AMIS_RS04555	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMIS_RS04570	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS04645	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMIS_RS04650	COG5001	Diguanylate cyclase
AMIS_RS04650	COG5002	protein histidine kinase activity
AMIS_RS04670	COG3285	dna ligase
AMIS_RS04670	COG1793	dna ligase
AMIS_RS04675	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS04680	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMIS_RS04700	COG1335	isochorismatase
AMIS_RS04705	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMIS_RS04740	COG1234	tRNA 3'-trailer cleavage
AMIS_RS04745	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS04750	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AMIS_RS04755	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMIS_RS04770	COG1228	amidohydrolase
AMIS_RS04785	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AMIS_RS04800	COG3217	Mosc domain protein beta barrel domain protein
AMIS_RS04800	COG0633	Ferredoxin
AMIS_RS04885	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AMIS_RS04895	COG5297	Belongs to the glycosyl hydrolase family 6
AMIS_RS04915	COG3226	Transcriptional regulator
AMIS_RS04925	COG1376	ErfK ybiS ycfS ynhG family protein
AMIS_RS04930	COG1376	ErfK ybiS ycfS ynhG family protein
AMIS_RS04945	COG0653	protein targeting
AMIS_RS04960	COG0431	NADPH-dependent FMN reductase
AMIS_RS04965	COG3119	arylsulfatase activity
AMIS_RS04970	COG2124	cytochrome p450
AMIS_RS05035	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS05050	COG4209	transmembrane transport
AMIS_RS05055	COG0395	ABC-type sugar transport system, permease component
AMIS_RS05080	COG0277	FAD linked oxidase domain protein
AMIS_RS05115	COG0598	Magnesium transport protein CorA
AMIS_RS05135	COG0456	acetyltransferase
AMIS_RS05150	COG2124	cytochrome p450
AMIS_RS05195	COG1609	Transcriptional regulator
AMIS_RS05205	COG2706	6-phosphogluconolactonase activity
AMIS_RS05215	COG1940	carbohydrate kinase activity
AMIS_RS05220	COG2115	Belongs to the xylose isomerase family
AMIS_RS05225	COG1070	Carbohydrate kinase
AMIS_RS05245	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS05255	COG0366	Alpha amylase catalytic
AMIS_RS05260	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMIS_RS05285	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMIS_RS05350	COG2264	protein methyltransferase activity
AMIS_RS05370	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMIS_RS05395	COG0629	single-stranded DNA binding
AMIS_RS05405	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AMIS_RS05410	COG0640	Transcriptional regulator
AMIS_RS05415	COG1492	cobalamin metabolic process
AMIS_RS05420	COG0501	Belongs to the peptidase M48B family
AMIS_RS05440	COG1793	dna ligase
AMIS_RS05455	COG1797	cobyrinic acid a,c-diamide synthase activity
AMIS_RS05475	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AMIS_RS05480	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMIS_RS05480	COG1648	precorrin-2 dehydrogenase activity
AMIS_RS05485	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AMIS_RS05530	COG0668	transmembrane transport
AMIS_RS05555	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AMIS_RS05570	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AMIS_RS05585	COG0698	ribose 5-phosphate isomerase
AMIS_RS05595	COG4552	Acetyltransferase involved in intracellular survival and related
AMIS_RS05605	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS05625	COG0640	Transcriptional regulator
AMIS_RS05645	COG0544	peptidyl-prolyl cis-trans isomerase activity
AMIS_RS05650	COG0740	serine-type endopeptidase activity
AMIS_RS05655	COG0740	serine-type endopeptidase activity
AMIS_RS05660	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMIS_RS05695	COG0525	valine-tRNA ligase activity
AMIS_RS05700	COG0285	dihydrofolate synthase activity
AMIS_RS05720	COG0105	UTP biosynthetic process
AMIS_RS05725	COG5002	protein histidine kinase activity
AMIS_RS05730	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMIS_RS05745	COG0596	Alpha beta hydrolase
AMIS_RS05750	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS05750	COG2172	sigma factor antagonist activity
AMIS_RS05750	COG2208	phosphoserine phosphatase activity
AMIS_RS05770	COG1530	ribonuclease E activity
AMIS_RS05775	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AMIS_RS05780	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AMIS_RS05785	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMIS_RS05795	COG0180	Tryptophanyl-tRNA synthetase
AMIS_RS05810	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMIS_RS05820	COG0406	alpha-ribazole phosphatase activity
AMIS_RS05830	COG1307	EDD domain protein, DegV family
AMIS_RS05840	COG2890	protein-(glutamine-N5) methyltransferase activity
AMIS_RS05850	COG0658	competence protein
AMIS_RS05850	COG2333	competence protein COMEC
AMIS_RS05865	COG0268	Binds directly to 16S ribosomal RNA
AMIS_RS05885	COG0481	GTPase activity
AMIS_RS05890	COG2261	transglycosylase associated protein
AMIS_RS05905	COG1024	Enoyl-CoA hydratase
AMIS_RS05920	COG1420	regulation of RNA biosynthetic process
AMIS_RS05925	COG0484	heat shock protein binding
AMIS_RS05945	COG0537	adenosine 5'-monophosphoramidase activity
AMIS_RS05960	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMIS_RS05975	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMIS_RS05990	COG1381	Involved in DNA repair and RecF pathway recombination
AMIS_RS05995	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMIS_RS06035	COG4172	Belongs to the ABC transporter superfamily
AMIS_RS06040	COG4721	ABC-type cobalt transport system, permease component
AMIS_RS06045	COG0596	Alpha beta hydrolase
AMIS_RS06070	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMIS_RS06075	COG1121	(ABC) transporter
AMIS_RS06100	COG0423	glycine-tRNA ligase activity
AMIS_RS06105	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AMIS_RS06105	COG3608	succinylglutamate desuccinylase aspartoacylase
AMIS_RS06125	COG2197	response regulator
AMIS_RS06145	COG2018	Roadblock/LC7 domain
AMIS_RS06165	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMIS_RS06195	COG1295	ribonuclease BN
AMIS_RS06200	COG1940	carbohydrate kinase activity
AMIS_RS06200	COG1846	Transcriptional regulator
AMIS_RS06205	COG1129	ABC transporter
AMIS_RS06210	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS06270	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AMIS_RS06310	COG1505	serine-type exopeptidase activity
AMIS_RS06360	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AMIS_RS06365	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMIS_RS06370	COG1414	Transcriptional regulator
AMIS_RS06375	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMIS_RS06395	COG3979	chitinase
AMIS_RS06415	COG1196	nuclear chromosome segregation
AMIS_RS06415	COG0741	lytic transglycosylase activity
AMIS_RS06415	COG0739	heme binding
AMIS_RS06490	COG0477	Major facilitator Superfamily
AMIS_RS06495	COG0018	arginyl-trna synthetase
AMIS_RS06500	COG0737	Belongs to the 5'-nucleotidase family
AMIS_RS06510	COG0515	serine threonine protein kinase
AMIS_RS06525	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AMIS_RS06530	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AMIS_RS06530	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMIS_RS06550	COG3973	AAA domain
AMIS_RS06575	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS06590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMIS_RS06595	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMIS_RS06620	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMIS_RS06625	COG0840	transmembrane signaling receptor activity
AMIS_RS06630	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AMIS_RS06635	COG0432	Pfam Uncharacterised protein family UPF0047
AMIS_RS06640	COG0022	dehydrogenase e1 component
AMIS_RS06685	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMIS_RS06730	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMIS_RS06740	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AMIS_RS06755	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AMIS_RS06765	COG0730	response to heat
AMIS_RS06770	COG2226	methyltransferase
AMIS_RS06795	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
AMIS_RS06800	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AMIS_RS06805	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AMIS_RS06805	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMIS_RS06810	COG0174	glutamine synthetase
AMIS_RS06820	COG1595	DNA-templated transcription, initiation
AMIS_RS06825	COG3766	membrane
AMIS_RS06830	COG1064	alcohol dehydrogenase
AMIS_RS06840	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AMIS_RS06850	COG1846	Transcriptional regulator
AMIS_RS06870	COG5650	phosphatidylinositol metabolic process
AMIS_RS06915	COG1404	Belongs to the peptidase S8 family
AMIS_RS06930	COG1674	ftsk spoiiie
AMIS_RS06960	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMIS_RS06960	COG1672	PFAM Archaeal ATPase
AMIS_RS06970	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AMIS_RS06975	COG0017	Asparaginyl-tRNA synthetase
AMIS_RS06985	COG0321	lipoyl(octanoyl) transferase activity
AMIS_RS07000	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMIS_RS07005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMIS_RS07015	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMIS_RS07020	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AMIS_RS07025	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AMIS_RS07040	COG1994	Peptidase M50
AMIS_RS07045	COG0667	Aldo Keto reductase
AMIS_RS07065	COG4555	ABC transporter
AMIS_RS07075	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AMIS_RS07090	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMIS_RS07095	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AMIS_RS07100	COG1929	Belongs to the glycerate kinase type-1 family
AMIS_RS07110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS07120	COG0425	Belongs to the sulfur carrier protein TusA family
AMIS_RS07130	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMIS_RS07145	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMIS_RS07165	COG2010	Cytochrome c
AMIS_RS07175	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AMIS_RS07185	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AMIS_RS07195	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMIS_RS07215	COG0501	Belongs to the peptidase M48B family
AMIS_RS07220	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS07225	COG2274	protein secretion by the type I secretion system
AMIS_RS07245	COG2197	response regulator
AMIS_RS07265	COG1940	carbohydrate kinase activity
AMIS_RS07275	COG2072	flavoprotein involved in K transport
AMIS_RS07330	COG2211	Major facilitator Superfamily
AMIS_RS07350	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMIS_RS07400	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AMIS_RS07410	COG0504	CTP synthase activity
AMIS_RS07420	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AMIS_RS07425	COG2815	serine threonine protein kinase
AMIS_RS07425	COG0515	serine threonine protein kinase
AMIS_RS07440	COG0142	geranyltranstransferase activity
AMIS_RS07465	COG1309	transcriptional regulator
AMIS_RS07475	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AMIS_RS07480	COG1053	succinate dehydrogenase
AMIS_RS07495	COG2226	methyltransferase
AMIS_RS07505	COG1233	COG1233 Phytoene dehydrogenase and related
AMIS_RS07565	COG0587	DNA-directed DNA polymerase activity
AMIS_RS07575	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMIS_RS07600	COG0714	Associated with various cellular activities
AMIS_RS07605	COG0495	leucyl-tRNA aminoacylation
AMIS_RS07615	COG3442	glutamine amidotransferase
AMIS_RS07620	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMIS_RS07630	COG2001	Belongs to the MraZ family
AMIS_RS07635	COG0275	rRNA processing
AMIS_RS07645	COG0768	penicillin binding
AMIS_RS07650	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMIS_RS07660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMIS_RS07670	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMIS_RS07675	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMIS_RS07680	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AMIS_RS07685	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMIS_RS07690	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AMIS_RS07695	COG1799	cell septum assembly
AMIS_RS07705	COG3599	regulation of cell shape
AMIS_RS07725	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMIS_RS07745	COG0587	DNA-directed DNA polymerase activity
AMIS_RS07755	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMIS_RS07760	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMIS_RS07765	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMIS_RS07770	COG0131	Imidazoleglycerol-phosphate dehydratase
AMIS_RS07775	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMIS_RS07785	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AMIS_RS07790	COG0583	DNA-binding transcription factor activity
AMIS_RS07800	COG0107	imidazoleglycerol-phosphate synthase activity
AMIS_RS07815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS07820	COG1022	Amp-dependent synthetase and ligase
AMIS_RS07830	COG1132	(ABC) transporter
AMIS_RS07835	COG1132	(ABC) transporter
AMIS_RS07840	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMIS_RS07855	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AMIS_RS07875	COG0134	indole-3-glycerol-phosphate synthase activity
AMIS_RS07880	COG0133	tryptophan synthase activity
AMIS_RS07885	COG0159	tryptophan synthase activity
AMIS_RS07890	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMIS_RS07895	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS07895	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AMIS_RS07905	COG0069	glutamate synthase activity
AMIS_RS07905	COG0070	glutamate synthase
AMIS_RS07905	COG0067	glutamate synthase
AMIS_RS07940	COG0559	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS07990	COG0539	negative regulation of cytoplasmic translation
AMIS_RS07995	COG0237	dephospho-CoA kinase activity
AMIS_RS07995	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMIS_RS08005	COG2329	Antibiotic biosynthesis monooxygenase
AMIS_RS08015	COG1217	gtp-binding protein TYPA
AMIS_RS08025	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMIS_RS08030	COG0740	serine-type endopeptidase activity
AMIS_RS08065	COG1162	GTPase activity
AMIS_RS08085	COG0322	excinuclease ABC activity
AMIS_RS08090	COG1660	Displays ATPase and GTPase activities
AMIS_RS08100	COG1481	regulation of sporulation
AMIS_RS08105	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AMIS_RS08110	COG0126	phosphoglycerate kinase activity
AMIS_RS08115	COG0149	triose-phosphate isomerase activity
AMIS_RS08120	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMIS_RS08130	COG0456	acetyltransferase
AMIS_RS08135	COG0363	glucosamine-6-phosphate deaminase activity
AMIS_RS08150	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AMIS_RS08160	COG0109	protoheme IX farnesyltransferase activity
AMIS_RS08200	COG0396	ATPase activity
AMIS_RS08205	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMIS_RS08210	COG0822	iron-sulfur transferase activity
AMIS_RS08225	COG2267	carboxylic ester hydrolase activity
AMIS_RS08255	COG2321	neutral zinc metallopeptidase
AMIS_RS08260	COG0488	(ABC) transporter
AMIS_RS08265	COG1024	Enoyl-CoA hydratase
AMIS_RS08270	COG1132	(ABC) transporter
AMIS_RS08280	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS08285	COG1309	transcriptional regulator
AMIS_RS08310	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMIS_RS08335	COG3903	Transcriptional regulator
AMIS_RS08335	COG3629	intracellular signal transduction
AMIS_RS08340	COG0006	proline dipeptidase activity
AMIS_RS08370	COG0714	Associated with various cellular activities
AMIS_RS08385	COG2197	response regulator
AMIS_RS08390	COG4585	Histidine kinase
AMIS_RS08400	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMIS_RS08405	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AMIS_RS08475	COG0745	RESPONSE REGULATOR receiver
AMIS_RS08500	COG1365	unkown
AMIS_RS08505	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMIS_RS08520	COG1175	transmembrane transport
AMIS_RS08525	COG0395	ABC-type sugar transport system, permease component
AMIS_RS08535	COG1175	transmembrane transport
AMIS_RS08540	COG0395	ABC-type sugar transport system, permease component
AMIS_RS08550	COG0646	methionine synthase
AMIS_RS08550	COG1410	methionine synthase
AMIS_RS08565	COG4585	Histidine kinase
AMIS_RS08570	COG2197	response regulator
AMIS_RS08625	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS08655	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMIS_RS08660	COG3961	Belongs to the TPP enzyme family
AMIS_RS08665	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMIS_RS08675	COG1309	transcriptional regulator
AMIS_RS08685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMIS_RS08700	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS08705	COG0463	Glycosyl transferase, family 2
AMIS_RS08710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMIS_RS08755	COG1309	transcriptional regulator
AMIS_RS08760	COG1053	succinate dehydrogenase
AMIS_RS08765	COG1253	flavin adenine dinucleotide binding
AMIS_RS08770	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AMIS_RS08780	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AMIS_RS08785	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AMIS_RS08790	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AMIS_RS08835	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS08865	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AMIS_RS08865	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMIS_RS08870	COG5002	protein histidine kinase activity
AMIS_RS08875	COG1252	NADH dehydrogenase
AMIS_RS08885	COG2205	protein histidine kinase activity
AMIS_RS08890	COG2200	EAL domain
AMIS_RS08890	COG2203	Gaf domain
AMIS_RS08890	COG2199	diguanylate cyclase activity
AMIS_RS08900	COG5002	protein histidine kinase activity
AMIS_RS08905	COG4251	negative regulation of phosphorylation
AMIS_RS08910	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMIS_RS08960	COG0628	permease
AMIS_RS08990	COG0366	Alpha amylase catalytic
AMIS_RS08995	COG2197	response regulator
AMIS_RS09025	COG2235	arginine
AMIS_RS09045	COG0477	Major facilitator Superfamily
AMIS_RS09070	COG2326	polyphosphate kinase activity
AMIS_RS09110	COG0531	amino acid
AMIS_RS09125	COG0477	Major facilitator Superfamily
AMIS_RS09140	COG2197	response regulator
AMIS_RS09145	COG1132	(ABC) transporter
AMIS_RS09160	COG1073	alpha beta
AMIS_RS09200	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS09205	COG1216	Glycosyl transferase, family 2
AMIS_RS09245	COG0387	Pfam Sodium calcium exchanger
AMIS_RS09250	COG0701	Predicted permease
AMIS_RS09265	COG0019	diaminopimelate decarboxylase activity
AMIS_RS09270	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMIS_RS09275	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMIS_RS09280	COG4106	trans-aconitate 2-methyltransferase activity
AMIS_RS09310	COG0730	response to heat
AMIS_RS09345	COG2720	vancomycin resistance protein
AMIS_RS09355	COG2205	protein histidine kinase activity
AMIS_RS09355	COG5002	protein histidine kinase activity
AMIS_RS09355	COG0784	Response regulator, receiver
AMIS_RS09400	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMIS_RS09405	COG0515	serine threonine protein kinase
AMIS_RS09405	COG2815	serine threonine protein kinase
AMIS_RS09420	COG1388	LysM domain
AMIS_RS09440	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AMIS_RS09465	COG4981	capsule polysaccharide biosynthetic process
AMIS_RS09475	COG0243	molybdopterin cofactor binding
AMIS_RS09505	COG4677	pectinesterase activity
AMIS_RS09510	COG0789	Transcriptional regulator
AMIS_RS09510	COG4978	Transcriptional regulator
AMIS_RS09530	COG1053	succinate dehydrogenase
AMIS_RS09540	COG1309	transcriptional regulator
AMIS_RS09550	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09570	COG2910	NAD(P)H-binding
AMIS_RS09580	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS09585	COG4569	acetaldehyde dehydrogenase (acetylating) activity
AMIS_RS09600	COG1053	succinate dehydrogenase
AMIS_RS09605	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS09620	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09625	COG2267	carboxylic ester hydrolase activity
AMIS_RS09630	COG0346	lactoylglutathione lyase activity
AMIS_RS09635	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMIS_RS09645	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09650	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09655	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09660	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AMIS_RS09665	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS09670	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS09685	COG0183	Belongs to the thiolase family
AMIS_RS09690	COG2124	cytochrome p450
AMIS_RS09700	COG0251	oxidation-reduction process
AMIS_RS09705	COG3903	Transcriptional regulator
AMIS_RS09705	COG3629	intracellular signal transduction
AMIS_RS09755	COG2070	2-Nitropropane dioxygenase
AMIS_RS09765	COG2188	Transcriptional regulator
AMIS_RS10340	COG4733	cellulase activity
AMIS_RS10340	COG5297	Belongs to the glycosyl hydrolase family 6
AMIS_RS10445	COG0305	Participates in initiation and elongation during chromosome replication
AMIS_RS10475	COG2197	response regulator
AMIS_RS10675	COG1132	(ABC) transporter
AMIS_RS10690	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS10705	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS10710	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS10715	COG0183	Belongs to the thiolase family
AMIS_RS10735	COG1024	Enoyl-CoA hydratase
AMIS_RS10745	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS10750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMIS_RS10755	COG1309	transcriptional regulator
AMIS_RS10775	COG1309	transcriptional regulator
AMIS_RS10785	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS10835	COG3459	Glycosyltransferase 36 associated
AMIS_RS10895	COG0277	FAD linked oxidase domain protein
AMIS_RS10900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS10915	COG2197	response regulator
AMIS_RS10925	COG1132	(ABC) transporter
AMIS_RS10930	COG1132	(ABC) transporter
AMIS_RS10960	COG1309	transcriptional regulator
AMIS_RS10970	COG1595	DNA-templated transcription, initiation
AMIS_RS10985	COG3387	PFAM Glycoside hydrolase 15-related
AMIS_RS11015	COG0477	Major facilitator Superfamily
AMIS_RS11065	COG3629	intracellular signal transduction
AMIS_RS11065	COG3903	Transcriptional regulator
AMIS_RS11075	COG0697	spore germination
AMIS_RS11085	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMIS_RS11100	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AMIS_RS11140	COG3304	Inner membrane component domain
AMIS_RS11155	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AMIS_RS11165	COG3033	Beta-eliminating lyase
AMIS_RS11215	COG2814	Major facilitator Superfamily
AMIS_RS11250	COG2814	Major facilitator Superfamily
AMIS_RS11270	COG2188	Transcriptional regulator
AMIS_RS11290	COG2235	arginine
AMIS_RS11310	COG4948	Mandelate Racemase Muconate Lactonizing
AMIS_RS11325	COG3842	ATPase activity
AMIS_RS11335	COG1609	Transcriptional regulator
AMIS_RS11360	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS11370	COG1802	Transcriptional regulator
AMIS_RS11400	COG0243	molybdopterin cofactor binding
AMIS_RS11415	COG1136	(ABC) transporter
AMIS_RS11415	COG4591	ABC-type transport system involved in lipoprotein release permease component
AMIS_RS11420	COG1136	(ABC) transporter
AMIS_RS11440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMIS_RS11445	COG0488	(ABC) transporter
AMIS_RS11470	COG2357	RelA SpoT domain protein
AMIS_RS11480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS11490	COG2807	transmembrane transport
AMIS_RS11560	COG2197	response regulator
AMIS_RS11605	COG0395	ABC-type sugar transport system, permease component
AMIS_RS11610	COG1175	transmembrane transport
AMIS_RS11615	COG1653	transport
AMIS_RS11620	COG4821	SIS domain
AMIS_RS11625	COG1737	Transcriptional regulator
AMIS_RS11645	COG3903	Transcriptional regulator
AMIS_RS11645	COG3629	intracellular signal transduction
AMIS_RS11670	COG0583	DNA-binding transcription factor activity
AMIS_RS11730	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS11745	COG1278	Cold shock
AMIS_RS11750	COG2197	response regulator
AMIS_RS11755	COG4585	Histidine kinase
AMIS_RS11780	COG2409	Drug exporters of the RND superfamily
AMIS_RS11805	COG0439	Biotin carboxylase
AMIS_RS11815	COG1253	flavin adenine dinucleotide binding
AMIS_RS11825	COG1404	Belongs to the peptidase S8 family
AMIS_RS11830	COG3876	Protein conserved in bacteria
AMIS_RS11855	COG0583	DNA-binding transcription factor activity
AMIS_RS11865	COG2409	Drug exporters of the RND superfamily
AMIS_RS11870	COG4585	Histidine kinase
AMIS_RS11875	COG2197	response regulator
AMIS_RS11895	COG2378	regulation of single-species biofilm formation
AMIS_RS11930	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS11935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS11940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMIS_RS11975	COG2197	response regulator
AMIS_RS11985	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMIS_RS11995	COG3237	CsbD-like
AMIS_RS12025	COG0667	Aldo Keto reductase
AMIS_RS12090	COG1309	transcriptional regulator
AMIS_RS12095	COG2814	Major facilitator Superfamily
AMIS_RS12110	COG1122	ATPase activity
AMIS_RS12120	COG4721	ABC-type cobalt transport system, permease component
AMIS_RS12140	COG3903	Transcriptional regulator
AMIS_RS12140	COG3629	intracellular signal transduction
AMIS_RS12145	COG2186	Transcriptional regulator
AMIS_RS12160	COG0444	Belongs to the ABC transporter superfamily
AMIS_RS12165	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS12175	COG1940	carbohydrate kinase activity
AMIS_RS12185	COG0657	acetylesterase activity
AMIS_RS12190	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS12200	COG0596	Alpha beta hydrolase
AMIS_RS12250	COG1414	Transcriptional regulator
AMIS_RS12330	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AMIS_RS12350	COG3360	Dodecin
AMIS_RS12355	COG1396	sequence-specific DNA binding
AMIS_RS12380	COG2226	methyltransferase
AMIS_RS12385	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AMIS_RS12395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS12425	COG3291	Pkd domain containing protein
AMIS_RS12435	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMIS_RS12445	COG0640	Transcriptional regulator
AMIS_RS12470	COG0483	inositol monophosphate 1-phosphatase activity
AMIS_RS12475	COG1846	Transcriptional regulator
AMIS_RS12495	COG1309	transcriptional regulator
AMIS_RS12540	COG1673	EVE domain
AMIS_RS12550	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMIS_RS12550	COG0456	acetyltransferase
AMIS_RS12570	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS12585	COG0477	Major facilitator Superfamily
AMIS_RS12605	COG1032	radical SAM domain protein
AMIS_RS12615	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMIS_RS12620	COG1024	Enoyl-CoA hydratase
AMIS_RS12680	COG4585	Histidine kinase
AMIS_RS12690	COG2197	response regulator
AMIS_RS12705	COG2909	trisaccharide binding
AMIS_RS12710	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMIS_RS12725	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS12775	COG2197	response regulator
AMIS_RS12780	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS12785	COG0596	Alpha beta hydrolase
AMIS_RS12805	COG0702	epimerase
AMIS_RS12810	COG1733	regulation of RNA biosynthetic process
AMIS_RS12850	COG1595	DNA-templated transcription, initiation
AMIS_RS12860	COG5002	protein histidine kinase activity
AMIS_RS12865	COG0745	RESPONSE REGULATOR receiver
AMIS_RS12870	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS12880	COG1136	(ABC) transporter
AMIS_RS12880	COG0577	efflux transmembrane transporter activity
AMIS_RS12885	COG1136	(ABC) transporter
AMIS_RS12885	COG0577	efflux transmembrane transporter activity
AMIS_RS12895	COG0745	RESPONSE REGULATOR receiver
AMIS_RS12900	COG5002	protein histidine kinase activity
AMIS_RS12905	COG1136	(ABC) transporter
AMIS_RS12905	COG0577	efflux transmembrane transporter activity
AMIS_RS12910	COG0577	efflux transmembrane transporter activity
AMIS_RS12910	COG1136	(ABC) transporter
AMIS_RS12920	COG2197	response regulator
AMIS_RS12925	COG3850	Histidine kinase
AMIS_RS12955	COG1733	regulation of RNA biosynthetic process
AMIS_RS12980	COG1609	Transcriptional regulator
AMIS_RS12985	COG1175	transmembrane transport
AMIS_RS12990	COG0395	ABC-type sugar transport system, permease component
AMIS_RS12995	COG3250	beta-galactosidase activity
AMIS_RS13005	COG3250	beta-galactosidase activity
AMIS_RS13015	COG2272	Belongs to the type-B carboxylesterase lipase family
AMIS_RS13045	COG0583	DNA-binding transcription factor activity
AMIS_RS13060	COG2203	Gaf domain
AMIS_RS13060	COG5001	Diguanylate cyclase
AMIS_RS13060	COG4251	negative regulation of phosphorylation
AMIS_RS13060	COG3706	GGDEF domain
AMIS_RS13090	COG2197	response regulator
AMIS_RS13095	COG2205	protein histidine kinase activity
AMIS_RS13120	COG0604	alcohol dehydrogenase
AMIS_RS13175	COG0431	NADPH-dependent FMN reductase
AMIS_RS13225	COG1132	(ABC) transporter
AMIS_RS13235	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS13240	COG4585	Histidine kinase
AMIS_RS13245	COG2197	response regulator
AMIS_RS13250	COG1136	(ABC) transporter
AMIS_RS13265	COG0586	Pfam SNARE associated Golgi protein
AMIS_RS13270	COG3263	regulation of cellular component size
AMIS_RS13280	COG0745	RESPONSE REGULATOR receiver
AMIS_RS13315	COG1309	transcriptional regulator
AMIS_RS13330	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS13365	COG1309	transcriptional regulator
AMIS_RS13375	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS13385	COG2030	dehydratase
AMIS_RS13390	COG3706	GGDEF domain
AMIS_RS13430	COG0535	radical SAM domain protein
AMIS_RS13440	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS13445	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AMIS_RS13455	COG2072	flavoprotein involved in K transport
AMIS_RS13485	COG0477	Major facilitator Superfamily
AMIS_RS13495	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMIS_RS13500	COG2409	Drug exporters of the RND superfamily
AMIS_RS13520	COG2197	response regulator
AMIS_RS13525	COG4585	Histidine kinase
AMIS_RS13530	COG1131	(ABC) transporter
AMIS_RS13540	COG0640	Transcriptional regulator
AMIS_RS13605	COG3386	PFAM SMP-30 Gluconolaconase
AMIS_RS13620	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS13660	COG0583	DNA-binding transcription factor activity
AMIS_RS13710	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AMIS_RS13735	COG1414	Transcriptional regulator
AMIS_RS13745	COG0395	ABC-type sugar transport system, permease component
AMIS_RS13755	COG0129	dihydroxy-acid dehydratase activity
AMIS_RS13770	COG3345	alpha-galactosidase
AMIS_RS13785	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS13795	COG1733	regulation of RNA biosynthetic process
AMIS_RS13805	COG0803	Belongs to the bacterial solute-binding protein 9 family
AMIS_RS13820	COG1121	(ABC) transporter
AMIS_RS13840	COG0395	ABC-type sugar transport system, permease component
AMIS_RS13845	COG1175	transmembrane transport
AMIS_RS13870	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMIS_RS13875	COG1121	(ABC) transporter
AMIS_RS13885	COG0803	Belongs to the bacterial solute-binding protein 9 family
AMIS_RS13905	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AMIS_RS13910	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AMIS_RS13915	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMIS_RS13945	COG3345	alpha-galactosidase
AMIS_RS13950	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS13960	COG3693	PFAM glycoside hydrolase, family 10
AMIS_RS14000	COG0702	epimerase
AMIS_RS14030	COG1595	DNA-templated transcription, initiation
AMIS_RS14055	COG0667	Aldo Keto reductase
AMIS_RS14075	COG2366	antibiotic biosynthetic process
AMIS_RS14110	COG1595	DNA-templated transcription, initiation
AMIS_RS14120	COG1309	transcriptional regulator
AMIS_RS14165	COG5297	Belongs to the glycosyl hydrolase family 6
AMIS_RS14180	COG3384	dioxygenase
AMIS_RS14185	COG0784	Response regulator, receiver
AMIS_RS14225	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
AMIS_RS14245	COG2801	Transposase and inactivated derivatives
AMIS_RS14245	COG3415	Transposase
AMIS_RS14305	COG1595	DNA-templated transcription, initiation
AMIS_RS14330	COG2197	response regulator
AMIS_RS14370	COG2837	iron assimilation
AMIS_RS14390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS14395	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS14400	COG1120	ATPase activity
AMIS_RS14405	COG0473	3-isopropylmalate dehydrogenase activity
AMIS_RS14455	COG4585	Histidine kinase
AMIS_RS14460	COG2197	response regulator
AMIS_RS14485	COG0778	Nitroreductase
AMIS_RS14500	COG2211	Major facilitator Superfamily
AMIS_RS14505	COG3250	beta-galactosidase activity
AMIS_RS14510	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS14520	COG1609	Transcriptional regulator
AMIS_RS14530	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AMIS_RS14535	COG0840	transmembrane signaling receptor activity
AMIS_RS14575	COG2186	Transcriptional regulator
AMIS_RS14595	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMIS_RS14600	COG4948	Mandelate Racemase Muconate Lactonizing
AMIS_RS14625	COG1051	belongs to the nudix hydrolase family
AMIS_RS14635	COG1940	carbohydrate kinase activity
AMIS_RS14635	COG1846	Transcriptional regulator
AMIS_RS14640	COG4209	transmembrane transport
AMIS_RS14645	COG0395	ABC-type sugar transport system, permease component
AMIS_RS14665	COG1595	DNA-templated transcription, initiation
AMIS_RS14715	COG3458	cephalosporin-C deacetylase activity
AMIS_RS14720	COG3345	alpha-galactosidase
AMIS_RS14725	COG1846	Transcriptional regulator
AMIS_RS14725	COG1940	carbohydrate kinase activity
AMIS_RS14750	COG0745	RESPONSE REGULATOR receiver
AMIS_RS14755	COG2205	protein histidine kinase activity
AMIS_RS14760	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMIS_RS14770	COG0784	Response regulator, receiver
AMIS_RS14780	COG5002	protein histidine kinase activity
AMIS_RS14820	COG0659	secondary active sulfate transmembrane transporter activity
AMIS_RS14825	COG0789	Transcriptional regulator
AMIS_RS14830	COG1802	Transcriptional regulator
AMIS_RS14835	COG0477	Major facilitator Superfamily
AMIS_RS14840	COG0783	Belongs to the Dps family
AMIS_RS14915	COG1051	belongs to the nudix hydrolase family
AMIS_RS14920	COG2205	protein histidine kinase activity
AMIS_RS14925	COG0745	RESPONSE REGULATOR receiver
AMIS_RS14970	COG4585	Histidine kinase
AMIS_RS14975	COG2197	response regulator
AMIS_RS14980	COG2409	Drug exporters of the RND superfamily
AMIS_RS14990	COG3480	Lon protease (S16) C-terminal proteolytic domain
AMIS_RS15005	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AMIS_RS15020	COG0789	Transcriptional regulator
AMIS_RS15035	COG0254	rRNA binding
AMIS_RS15050	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AMIS_RS15080	COG3509	depolymerase
AMIS_RS15095	COG1533	DNA photolyase activity
AMIS_RS15105	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AMIS_RS15120	COG2197	response regulator
AMIS_RS15140	COG0726	polysaccharide deacetylase
AMIS_RS15145	COG1053	succinate dehydrogenase
AMIS_RS15200	COG0515	serine threonine protein kinase
AMIS_RS15220	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMIS_RS15235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS15245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMIS_RS15265	COG0659	secondary active sulfate transmembrane transporter activity
AMIS_RS15275	COG0071	Belongs to the small heat shock protein (HSP20) family
AMIS_RS15280	COG1252	NADH dehydrogenase
AMIS_RS15330	COG2226	methyltransferase
AMIS_RS15370	COG0586	Pfam SNARE associated Golgi protein
AMIS_RS15375	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS15380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS15390	COG2319	Wd-40 repeat
AMIS_RS15390	COG2319	Wd-40 repeat
AMIS_RS15410	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS15415	COG2085	NADP oxidoreductase coenzyme F420-dependent
AMIS_RS15425	COG4249	Peptidase C14 caspase catalytic subunit p20
AMIS_RS15425	COG2319	Wd-40 repeat
AMIS_RS15430	COG2124	cytochrome p450
AMIS_RS15545	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMIS_RS15550	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMIS_RS15575	COG2197	response regulator
AMIS_RS15640	COG1063	alcohol dehydrogenase
AMIS_RS15675	COG0745	RESPONSE REGULATOR receiver
AMIS_RS15680	COG2205	protein histidine kinase activity
AMIS_RS15685	COG0840	transmembrane signaling receptor activity
AMIS_RS15705	COG3046	protein related to deoxyribodipyrimidine photolyase
AMIS_RS15720	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS15730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS15735	COG0601	transmembrane transport
AMIS_RS15740	COG0747	negative chemotaxis
AMIS_RS15770	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AMIS_RS15775	COG1228	amidohydrolase
AMIS_RS15780	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AMIS_RS15785	COG1522	sequence-specific DNA binding
AMIS_RS15795	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMIS_RS15800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS15820	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS15825	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS15835	COG1063	alcohol dehydrogenase
AMIS_RS15840	COG2124	cytochrome p450
AMIS_RS15895	COG4122	O-methyltransferase activity
AMIS_RS15905	COG0277	FAD linked oxidase domain protein
AMIS_RS15915	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS15930	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AMIS_RS15940	COG2132	Multicopper oxidase
AMIS_RS15945	COG0475	glutathione-regulated potassium exporter activity
AMIS_RS15955	COG0395	ABC-type sugar transport system, permease component
AMIS_RS15960	COG1175	transmembrane transport
AMIS_RS15965	COG1653	transport
AMIS_RS15990	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AMIS_RS16010	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS16015	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS16105	COG2226	methyltransferase
AMIS_RS16120	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS16135	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS16140	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS16145	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS16165	COG0477	Major facilitator Superfamily
AMIS_RS16180	COG1271	oxidase subunit
AMIS_RS16200	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMIS_RS16225	COG0789	Transcriptional regulator
AMIS_RS16250	COG1064	alcohol dehydrogenase
AMIS_RS16270	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS16270	COG3321	synthase
AMIS_RS16270	COG0604	alcohol dehydrogenase
AMIS_RS16295	COG1595	DNA-templated transcription, initiation
AMIS_RS16320	COG0589	response to stress
AMIS_RS16330	COG1295	ribonuclease BN
AMIS_RS16340	COG3795	YCII-related domain
AMIS_RS16365	COG0386	Belongs to the glutathione peroxidase family
AMIS_RS16370	COG0321	lipoyl(octanoyl) transferase activity
AMIS_RS16385	COG1573	uracil-dna glycosylase
AMIS_RS16400	COG1982	Orn Lys Arg decarboxylase major
AMIS_RS16410	COG0765	amino acid transport
AMIS_RS16470	COG2197	response regulator
AMIS_RS16490	COG2207	Transcriptional regulator
AMIS_RS16490	COG1609	Transcriptional regulator
AMIS_RS16505	COG0697	spore germination
AMIS_RS16510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS16530	COG4585	Histidine kinase
AMIS_RS16535	COG2197	response regulator
AMIS_RS16540	COG0577	efflux transmembrane transporter activity
AMIS_RS16540	COG1136	(ABC) transporter
AMIS_RS16560	COG0039	L-malate dehydrogenase activity
AMIS_RS16570	COG0022	dehydrogenase e1 component
AMIS_RS16580	COG1522	sequence-specific DNA binding
AMIS_RS16585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS16590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS16660	COG4191	Histidine kinase
AMIS_RS16665	COG1051	belongs to the nudix hydrolase family
AMIS_RS16700	COG0758	DNA mediated transformation
AMIS_RS16710	COG2814	Major facilitator Superfamily
AMIS_RS16765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS16775	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMIS_RS16780	COG3300	MHYT domain
AMIS_RS16780	COG5001	Diguanylate cyclase
AMIS_RS16785	COG3537	Alpha-1,2-mannosidase
AMIS_RS16810	COG2365	Tyrosine phosphatase family
AMIS_RS16820	COG2197	response regulator
AMIS_RS16935	COG1609	Transcriptional regulator
AMIS_RS16970	COG0346	lactoylglutathione lyase activity
AMIS_RS16995	COG0477	Major facilitator Superfamily
AMIS_RS17000	COG3226	Transcriptional regulator
AMIS_RS17010	COG3347	Dehydrogenase
AMIS_RS17010	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS17015	COG1070	Carbohydrate kinase
AMIS_RS17020	COG0247	lactate metabolic process
AMIS_RS17025	COG1139	Iron-sulfur cluster binding protein
AMIS_RS17030	COG1556	Lactate utilization protein
AMIS_RS17045	COG2770	Histidine kinase
AMIS_RS17045	COG2208	phosphoserine phosphatase activity
AMIS_RS17050	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMIS_RS17055	COG2072	flavoprotein involved in K transport
AMIS_RS17095	COG2197	response regulator
AMIS_RS17100	COG4585	Histidine kinase
AMIS_RS17105	COG1131	(ABC) transporter
AMIS_RS17120	COG2409	Drug exporters of the RND superfamily
AMIS_RS17150	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS17150	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
AMIS_RS17155	COG0697	spore germination
AMIS_RS17180	COG3387	PFAM Glycoside hydrolase 15-related
AMIS_RS17210	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AMIS_RS17225	COG1609	Transcriptional regulator
AMIS_RS17245	COG0243	molybdopterin cofactor binding
AMIS_RS17280	COG1473	amidohydrolase
AMIS_RS17340	COG3795	YCII-related domain
AMIS_RS17345	COG4941	Belongs to the sigma-70 factor family
AMIS_RS17365	COG3629	intracellular signal transduction
AMIS_RS17365	COG3903	Transcriptional regulator
AMIS_RS17375	COG0670	Belongs to the BI1 family
AMIS_RS17395	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS17420	COG1132	(ABC) transporter
AMIS_RS17425	COG1132	(ABC) transporter
AMIS_RS17430	COG1120	ATPase activity
AMIS_RS17435	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS17440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS17500	COG1247	-acetyltransferase
AMIS_RS17510	COG0667	Aldo Keto reductase
AMIS_RS17525	COG1733	regulation of RNA biosynthetic process
AMIS_RS17545	COG1309	transcriptional regulator
AMIS_RS17550	COG2814	Major facilitator Superfamily
AMIS_RS17610	COG0640	Transcriptional regulator
AMIS_RS17625	COG2197	response regulator
AMIS_RS17630	COG4585	Histidine kinase
AMIS_RS17680	COG0436	Aminotransferase
AMIS_RS17705	COG0574	Belongs to the PEP-utilizing enzyme family
AMIS_RS17705	COG3848	Pyruvate phosphate dikinase
AMIS_RS17725	COG0745	RESPONSE REGULATOR receiver
AMIS_RS17750	COG1136	(ABC) transporter
AMIS_RS17750	COG0577	efflux transmembrane transporter activity
AMIS_RS17755	COG0577	efflux transmembrane transporter activity
AMIS_RS17755	COG1136	(ABC) transporter
AMIS_RS17770	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS17785	COG4948	Mandelate Racemase Muconate Lactonizing
AMIS_RS17830	COG3415	Transposase
AMIS_RS17830	COG2801	Transposase and inactivated derivatives
AMIS_RS17905	COG0531	amino acid
AMIS_RS17945	COG1116	anion transmembrane transporter activity
AMIS_RS17950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS17955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS17965	COG1414	Transcriptional regulator
AMIS_RS17970	COG5001	Diguanylate cyclase
AMIS_RS17975	COG1309	transcriptional regulator
AMIS_RS18020	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS18025	COG1414	Transcriptional regulator
AMIS_RS18030	COG3485	protocatechuate 3,4-dioxygenase
AMIS_RS18035	COG3485	protocatechuate 3,4-dioxygenase
AMIS_RS18045	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMIS_RS18090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS18100	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMIS_RS18105	COG1073	alpha beta
AMIS_RS18185	COG2226	methyltransferase
AMIS_RS18205	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMIS_RS18220	COG2375	cellular response to nickel ion
AMIS_RS18305	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS18315	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS18335	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS18340	COG1609	Transcriptional regulator
AMIS_RS18355	COG0395	ABC-type sugar transport system, permease component
AMIS_RS18360	COG1501	Belongs to the glycosyl hydrolase 31 family
AMIS_RS18375	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AMIS_RS18385	COG1122	ATPase activity
AMIS_RS18400	COG0310	cobalt ion transport
AMIS_RS18425	COG0840	transmembrane signaling receptor activity
AMIS_RS18430	COG5002	protein histidine kinase activity
AMIS_RS18435	COG2204	response regulator
AMIS_RS18445	COG4952	isomerase
AMIS_RS18450	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS18455	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS18460	COG1129	ABC transporter
AMIS_RS18465	COG1879	ABC-type sugar transport system periplasmic component
AMIS_RS18485	COG0515	serine threonine protein kinase
AMIS_RS18485	COG2815	serine threonine protein kinase
AMIS_RS18510	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS18515	COG3842	ATPase activity
AMIS_RS18525	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMIS_RS18530	COG1177	transmembrane transport
AMIS_RS18535	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMIS_RS18550	COG5002	protein histidine kinase activity
AMIS_RS18555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS18570	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS18575	COG2208	phosphoserine phosphatase activity
AMIS_RS18590	COG1175	transmembrane transport
AMIS_RS18600	COG1609	Transcriptional regulator
AMIS_RS18620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS18625	COG0248	Ppx GppA phosphatase
AMIS_RS18630	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMIS_RS18655	COG3191	aminopeptidase activity
AMIS_RS18670	COG0442	prolyl-tRNA aminoacylation
AMIS_RS18675	COG0702	epimerase
AMIS_RS18680	COG1733	regulation of RNA biosynthetic process
AMIS_RS18700	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMIS_RS18705	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS18725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS18730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS18735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS18760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMIS_RS18770	COG0765	amino acid transport
AMIS_RS18805	COG0366	Alpha amylase catalytic
AMIS_RS18845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS18850	COG2409	Drug exporters of the RND superfamily
AMIS_RS18860	COG1132	(ABC) transporter
AMIS_RS18880	COG0778	Nitroreductase
AMIS_RS18890	COG0372	Belongs to the citrate synthase family
AMIS_RS18955	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMIS_RS18960	COG2146	nitrite reductase [NAD(P)H] activity
AMIS_RS18965	COG2223	nitrite transmembrane transporter activity
AMIS_RS18980	COG1609	Transcriptional regulator
AMIS_RS18985	COG2223	nitrite transmembrane transporter activity
AMIS_RS19010	COG1136	(ABC) transporter
AMIS_RS19010	COG0577	efflux transmembrane transporter activity
AMIS_RS19015	COG0577	efflux transmembrane transporter activity
AMIS_RS19035	COG0300	oxidoreductase activity
AMIS_RS19060	COG0300	oxidoreductase activity
AMIS_RS19095	COG2205	protein histidine kinase activity
AMIS_RS19130	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMIS_RS19135	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AMIS_RS19140	COG2080	2 iron, 2 sulfur cluster binding
AMIS_RS19175	COG0583	DNA-binding transcription factor activity
AMIS_RS19180	COG1088	dTDP-glucose 4,6-dehydratase activity
AMIS_RS19215	COG0706	membrane insertase activity
AMIS_RS19220	COG2814	Major facilitator Superfamily
AMIS_RS19225	COG1846	Transcriptional regulator
AMIS_RS19230	COG2267	carboxylic ester hydrolase activity
AMIS_RS19235	COG1435	thymidine kinase activity
AMIS_RS19240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS19245	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMIS_RS19260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMIS_RS19280	COG2814	Major facilitator Superfamily
AMIS_RS19290	COG3851	Histidine kinase
AMIS_RS19295	COG2197	response regulator
AMIS_RS19315	COG0604	alcohol dehydrogenase
AMIS_RS19335	COG1672	PFAM Archaeal ATPase
AMIS_RS19335	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMIS_RS19370	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AMIS_RS19375	COG2226	methyltransferase
AMIS_RS19380	COG3300	MHYT domain
AMIS_RS19380	COG5001	Diguanylate cyclase
AMIS_RS19395	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS19400	COG5002	protein histidine kinase activity
AMIS_RS19400	COG3447	MASE1 domain protein
AMIS_RS19400	COG5001	Diguanylate cyclase
AMIS_RS19450	COG1024	Enoyl-CoA hydratase
AMIS_RS19470	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AMIS_RS19475	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AMIS_RS19480	COG5002	protein histidine kinase activity
AMIS_RS19485	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS19490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS19500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS19510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMIS_RS19545	COG1309	transcriptional regulator
AMIS_RS19550	COG0574	Belongs to the PEP-utilizing enzyme family
AMIS_RS19550	COG3848	Pyruvate phosphate dikinase
AMIS_RS19555	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS19560	COG3708	Transcriptional regulator
AMIS_RS19560	COG2207	Transcriptional regulator
AMIS_RS19575	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMIS_RS19580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS19585	COG2814	Major facilitator Superfamily
AMIS_RS19600	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS19610	COG0542	response to heat
AMIS_RS19635	COG1674	ftsk spoiiie
AMIS_RS19670	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMIS_RS19670	COG1902	pentaerythritol trinitrate reductase activity
AMIS_RS19690	COG0277	FAD linked oxidase domain protein
AMIS_RS19690	COG0247	lactate metabolic process
AMIS_RS19695	COG2072	flavoprotein involved in K transport
AMIS_RS19740	COG1140	nitrate reductase beta subunit
AMIS_RS19745	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AMIS_RS19750	COG2181	nitrate reductase activity
AMIS_RS19800	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS19810	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS19820	COG3119	arylsulfatase activity
AMIS_RS19825	COG3300	MHYT domain
AMIS_RS19825	COG5001	Diguanylate cyclase
AMIS_RS19835	COG2205	protein histidine kinase activity
AMIS_RS19840	COG0745	RESPONSE REGULATOR receiver
AMIS_RS19860	COG1940	carbohydrate kinase activity
AMIS_RS19860	COG1846	Transcriptional regulator
AMIS_RS19865	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AMIS_RS19880	COG0010	Belongs to the arginase family
AMIS_RS19900	COG1940	carbohydrate kinase activity
AMIS_RS19940	COG0596	Alpha beta hydrolase
AMIS_RS19950	COG0784	Response regulator, receiver
AMIS_RS19970	COG0714	Associated with various cellular activities
AMIS_RS20035	COG5002	protein histidine kinase activity
AMIS_RS20075	COG3226	Transcriptional regulator
AMIS_RS20110	COG5006	permease, DMT superfamily
AMIS_RS20205	COG0596	Alpha beta hydrolase
AMIS_RS20220	COG0583	DNA-binding transcription factor activity
AMIS_RS20230	COG4974	Belongs to the 'phage' integrase family
AMIS_RS20245	COG2354	Protein conserved in bacteria
AMIS_RS20255	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMIS_RS20255	COG0574	Belongs to the PEP-utilizing enzyme family
AMIS_RS20260	COG2188	Transcriptional regulator
AMIS_RS20265	COG1131	(ABC) transporter
AMIS_RS20300	COG1131	(ABC) transporter
AMIS_RS20305	COG0842	Transport permease protein
AMIS_RS20310	COG4585	Histidine kinase
AMIS_RS20315	COG2197	response regulator
AMIS_RS20320	COG1191	sigma factor activity
AMIS_RS20335	COG0488	(ABC) transporter
AMIS_RS20340	COG1968	undecaprenyl-diphosphatase activity
AMIS_RS20380	COG4585	Histidine kinase
AMIS_RS20385	COG2197	response regulator
AMIS_RS20415	COG2197	response regulator
AMIS_RS20495	COG1764	response to oxidative stress
AMIS_RS20500	COG1846	Transcriptional regulator
AMIS_RS20520	COG4702	Belongs to the UPF0303 family
AMIS_RS20550	COG2223	nitrite transmembrane transporter activity
AMIS_RS20600	COG0019	diaminopimelate decarboxylase activity
AMIS_RS20640	COG0242	peptide deformylase activity
AMIS_RS20650	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMIS_RS20660	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMIS_RS20660	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMIS_RS20665	COG0667	Aldo Keto reductase
AMIS_RS20705	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS20725	COG3599	regulation of cell shape
AMIS_RS20735	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AMIS_RS20765	COG0477	Major facilitator Superfamily
AMIS_RS20785	COG0346	lactoylglutathione lyase activity
AMIS_RS20790	COG0640	Transcriptional regulator
AMIS_RS20795	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS20795	COG1017	nitric oxide dioxygenase activity
AMIS_RS20810	COG2197	response regulator
AMIS_RS20845	COG0110	maltose O-acetyltransferase activity
AMIS_RS20855	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS20865	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS20875	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AMIS_RS20885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMIS_RS20930	COG4106	trans-aconitate 2-methyltransferase activity
AMIS_RS20945	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS20980	COG0583	DNA-binding transcription factor activity
AMIS_RS20985	COG0183	Belongs to the thiolase family
AMIS_RS20995	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AMIS_RS21020	COG5002	protein histidine kinase activity
AMIS_RS21100	COG2197	response regulator
AMIS_RS21110	COG0778	Nitroreductase
AMIS_RS21130	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AMIS_RS21150	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS21170	COG4566	intracellular signal transduction
AMIS_RS21175	COG0492	ferredoxin-NADP+ reductase activity
AMIS_RS21195	COG3012	SEC-C Motif Domain Protein
AMIS_RS21200	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMIS_RS21215	COG1063	alcohol dehydrogenase
AMIS_RS21230	COG1653	transport
AMIS_RS21245	COG1024	Enoyl-CoA hydratase
AMIS_RS21265	COG1131	(ABC) transporter
AMIS_RS21285	COG2340	Cysteine-rich secretory protein family
AMIS_RS21290	COG1120	ATPase activity
AMIS_RS21295	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS21300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS21325	COG5278	phosphoserine phosphatase activity
AMIS_RS21325	COG0840	transmembrane signaling receptor activity
AMIS_RS21390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS21395	COG2151	metal-sulfur cluster biosynthetic enzyme
AMIS_RS21400	COG3396	Phenylacetate-CoA oxygenase
AMIS_RS21405	COG3460	Phenylacetate-CoA oxygenase
AMIS_RS21410	COG3396	Phenylacetate-CoA oxygenase
AMIS_RS21415	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS21415	COG2030	dehydratase
AMIS_RS21450	COG1902	pentaerythritol trinitrate reductase activity
AMIS_RS21470	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS21470	COG3693	PFAM glycoside hydrolase, family 10
AMIS_RS21470	COG2382	esterase
AMIS_RS21480	COG1309	transcriptional regulator
AMIS_RS21510	COG3250	beta-galactosidase activity
AMIS_RS21530	COG0604	alcohol dehydrogenase
AMIS_RS21530	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS21530	COG3321	synthase
AMIS_RS21535	COG1476	TRANSCRIPTIONal
AMIS_RS21560	COG1846	Transcriptional regulator
AMIS_RS21580	COG0589	response to stress
AMIS_RS21620	COG0640	Transcriptional regulator
AMIS_RS21630	COG1064	alcohol dehydrogenase
AMIS_RS21650	COG3866	Pectate lyase
AMIS_RS21675	COG2072	flavoprotein involved in K transport
AMIS_RS21690	COG0738	Major facilitator superfamily
AMIS_RS21700	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS21705	COG1309	transcriptional regulator
AMIS_RS21745	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS21750	COG0395	ABC-type sugar transport system, permease component
AMIS_RS21760	COG1653	transport
AMIS_RS21770	COG1609	Transcriptional regulator
AMIS_RS21810	COG0110	maltose O-acetyltransferase activity
AMIS_RS21850	COG0672	)-iron permease
AMIS_RS21860	COG2837	iron assimilation
AMIS_RS21875	COG3903	Transcriptional regulator
AMIS_RS21875	COG3629	intracellular signal transduction
AMIS_RS21945	COG1120	ATPase activity
AMIS_RS21975	COG0667	Aldo Keto reductase
AMIS_RS22010	COG0702	epimerase
AMIS_RS22035	COG4585	Histidine kinase
AMIS_RS22040	COG2197	response regulator
AMIS_RS22065	COG2175	clavaminate synthase activity
AMIS_RS22075	COG4521	taurine ABC transporter
AMIS_RS22080	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS22115	COG3831	ATPase activity
AMIS_RS22140	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS22165	COG2226	methyltransferase
AMIS_RS22330	COG2226	methyltransferase
AMIS_RS22345	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS22375	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AMIS_RS22385	COG3795	YCII-related domain
AMIS_RS22390	COG4941	Belongs to the sigma-70 factor family
AMIS_RS22420	COG1121	(ABC) transporter
AMIS_RS22425	COG0803	Belongs to the bacterial solute-binding protein 9 family
AMIS_RS22435	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AMIS_RS22440	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AMIS_RS22455	COG2080	2 iron, 2 sulfur cluster binding
AMIS_RS22460	COG2010	Cytochrome c
AMIS_RS22460	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMIS_RS22490	COG1408	metallophosphoesterase
AMIS_RS22510	COG1414	Transcriptional regulator
AMIS_RS22515	COG0402	S-adenosylhomocysteine deaminase activity
AMIS_RS22520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMIS_RS22570	COG0657	acetylesterase activity
AMIS_RS22575	COG4566	intracellular signal transduction
AMIS_RS22630	COG3629	intracellular signal transduction
AMIS_RS22630	COG3903	Transcriptional regulator
AMIS_RS22655	COG2268	Band 7 protein
AMIS_RS22660	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMIS_RS22665	COG1846	Transcriptional regulator
AMIS_RS22670	COG2814	Major facilitator Superfamily
AMIS_RS22675	COG0656	L-ascorbic acid biosynthetic process
AMIS_RS22685	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMIS_RS22725	COG1672	PFAM Archaeal ATPase
AMIS_RS22725	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMIS_RS22740	COG0596	Alpha beta hydrolase
AMIS_RS22745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMIS_RS22760	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS22770	COG0596	Alpha beta hydrolase
AMIS_RS22775	COG0596	Alpha beta hydrolase
AMIS_RS22805	COG2197	response regulator
AMIS_RS22810	COG4585	Histidine kinase
AMIS_RS22820	COG1131	(ABC) transporter
AMIS_RS22865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS22870	COG0800	Aldolase
AMIS_RS22875	COG0246	Mannitol dehydrogenase
AMIS_RS22880	COG1904	glucuronate isomerase
AMIS_RS22885	COG2721	sulfolactate sulfo-lyase activity
AMIS_RS22920	COG0477	Major facilitator Superfamily
AMIS_RS22925	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AMIS_RS22930	COG0076	glutamate decarboxylase activity
AMIS_RS22970	COG1760	l-serine dehydratase
AMIS_RS22975	COG0509	glycine decarboxylation via glycine cleavage system
AMIS_RS22980	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AMIS_RS23010	COG2070	2-Nitropropane dioxygenase
AMIS_RS23020	COG1136	(ABC) transporter
AMIS_RS23050	COG3940	Belongs to the glycosyl hydrolase 43 family
AMIS_RS23060	COG0494	nUDIX hydrolase
AMIS_RS23100	COG0596	Alpha beta hydrolase
AMIS_RS23115	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMIS_RS23130	COG0596	Alpha beta hydrolase
AMIS_RS23135	COG2197	response regulator
AMIS_RS23150	COG1131	(ABC) transporter
AMIS_RS23155	COG3250	beta-galactosidase activity
AMIS_RS23160	COG0395	ABC-type sugar transport system, permease component
AMIS_RS23165	COG1175	transmembrane transport
AMIS_RS23175	COG1609	Transcriptional regulator
AMIS_RS23180	COG1609	Transcriptional regulator
AMIS_RS23215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS23235	COG0069	glutamate synthase activity
AMIS_RS23255	COG2205	protein histidine kinase activity
AMIS_RS23265	COG3546	catalase activity
AMIS_RS23270	COG1914	H( )-stimulated, divalent metal cation uptake system
AMIS_RS23275	COG2197	response regulator
AMIS_RS23285	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AMIS_RS23290	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS23350	COG0667	Aldo Keto reductase
AMIS_RS23370	COG0463	Glycosyl transferase, family 2
AMIS_RS23380	COG3973	AAA domain
AMIS_RS23390	COG1607	acyl-coa hydrolase
AMIS_RS23395	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS23400	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMIS_RS23405	COG1228	amidohydrolase
AMIS_RS23410	COG0604	alcohol dehydrogenase
AMIS_RS23435	COG0583	DNA-binding transcription factor activity
AMIS_RS23450	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS23455	COG2197	response regulator
AMIS_RS23460	COG4585	Histidine kinase
AMIS_RS23465	COG1136	(ABC) transporter
AMIS_RS23475	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMIS_RS23480	COG5001	Diguanylate cyclase
AMIS_RS23480	COG1716	ATPase activity
AMIS_RS23500	COG3706	GGDEF domain
AMIS_RS23515	COG2223	nitrite transmembrane transporter activity
AMIS_RS23520	COG3447	MASE1 domain protein
AMIS_RS23520	COG5001	Diguanylate cyclase
AMIS_RS23520	COG5002	protein histidine kinase activity
AMIS_RS23560	COG1063	alcohol dehydrogenase
AMIS_RS23605	COG0667	Aldo Keto reductase
AMIS_RS23610	COG0789	Transcriptional regulator
AMIS_RS23665	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMIS_RS23695	COG3022	response to hydroperoxide
AMIS_RS23720	COG0706	membrane insertase activity
AMIS_RS23735	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMIS_RS23760	COG2124	cytochrome p450
AMIS_RS23770	COG0531	amino acid
AMIS_RS23780	COG0515	serine threonine protein kinase
AMIS_RS23805	COG1072	(Pantothenic acid kinase))
AMIS_RS23810	COG1408	metallophosphoesterase
AMIS_RS23825	COG1132	(ABC) transporter
AMIS_RS23830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS23860	COG0673	inositol 2-dehydrogenase activity
AMIS_RS23880	COG1082	Xylose isomerase domain protein TIM barrel
AMIS_RS23890	COG3962	Belongs to the TPP enzyme family
AMIS_RS23895	COG3718	enzyme involved in inositol metabolism
AMIS_RS23935	COG0577	efflux transmembrane transporter activity
AMIS_RS23935	COG1136	(ABC) transporter
AMIS_RS23940	COG1136	(ABC) transporter
AMIS_RS23950	COG2205	protein histidine kinase activity
AMIS_RS23955	COG0745	RESPONSE REGULATOR receiver
AMIS_RS23975	COG2197	response regulator
AMIS_RS23985	COG0406	alpha-ribazole phosphatase activity
AMIS_RS24005	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMIS_RS24030	COG1309	transcriptional regulator
AMIS_RS24065	COG0515	serine threonine protein kinase
AMIS_RS24085	COG2197	response regulator
AMIS_RS24090	COG4585	Histidine kinase
AMIS_RS24110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS24125	COG1132	(ABC) transporter
AMIS_RS24130	COG1309	transcriptional regulator
AMIS_RS24155	COG0166	Belongs to the GPI family
AMIS_RS24170	COG0395	ABC-type sugar transport system, permease component
AMIS_RS24175	COG1175	transmembrane transport
AMIS_RS24180	COG1653	transport
AMIS_RS24285	COG4214	carbohydrate transport
AMIS_RS24295	COG4213	ABC transporter substrate-binding protein
AMIS_RS24305	COG1620	l-lactate permease
AMIS_RS24310	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMIS_RS24310	COG2080	2 iron, 2 sulfur cluster binding
AMIS_RS24320	COG1271	oxidase subunit
AMIS_RS24325	COG1294	oxidase, subunit
AMIS_RS24330	COG4988	ABC transporter
AMIS_RS24335	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMIS_RS24450	COG0456	acetyltransferase
AMIS_RS24455	COG1376	ErfK ybiS ycfS ynhG family protein
AMIS_RS24460	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS24475	COG1404	Belongs to the peptidase S8 family
AMIS_RS24475	COG4935	Belongs to the peptidase S8 family
AMIS_RS24490	COG4585	Histidine kinase
AMIS_RS24495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMIS_RS24550	COG0745	RESPONSE REGULATOR receiver
AMIS_RS24580	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMIS_RS24585	COG0791	NLP P60 protein
AMIS_RS24585	COG3103	Sh3 type 3 domain protein
AMIS_RS24585	COG1388	LysM domain
AMIS_RS24590	COG0501	Belongs to the peptidase M48B family
AMIS_RS24600	COG1271	oxidase subunit
AMIS_RS24605	COG1294	oxidase, subunit
AMIS_RS24610	COG4988	ABC transporter
AMIS_RS24615	COG0183	Belongs to the thiolase family
AMIS_RS24630	COG0859	PFAM glycosyl transferase family 9
AMIS_RS24635	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS24640	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMIS_RS24640	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AMIS_RS24645	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AMIS_RS24650	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS24660	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AMIS_RS24670	COG2192	nodulation
AMIS_RS24690	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS24710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMIS_RS24720	COG0477	Major facilitator Superfamily
AMIS_RS24755	COG1024	Enoyl-CoA hydratase
AMIS_RS24765	COG3425	synthase
AMIS_RS24770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMIS_RS24780	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMIS_RS24780	COG0300	oxidoreductase activity
AMIS_RS24780	COG4221	oxidoreductase activity
AMIS_RS24780	COG3321	synthase
AMIS_RS24785	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMIS_RS24795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMIS_RS24800	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMIS_RS24810	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS24820	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS24900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMIS_RS24910	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMIS_RS24915	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS24920	COG1132	(ABC) transporter
AMIS_RS24930	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AMIS_RS24935	COG0431	NADPH-dependent FMN reductase
AMIS_RS24950	COG1309	transcriptional regulator
AMIS_RS24955	COG0477	Major facilitator Superfamily
AMIS_RS24960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS24970	COG0326	Molecular chaperone. Has ATPase activity
AMIS_RS25000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AMIS_RS25020	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS25040	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMIS_RS25050	COG0514	ATP-dependent DNA helicase (RecQ)
AMIS_RS25055	COG2353	YceI-like domain
AMIS_RS25070	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMIS_RS25070	COG0574	Belongs to the PEP-utilizing enzyme family
AMIS_RS25080	COG0277	FAD linked oxidase domain protein
AMIS_RS25085	COG0277	FAD linked oxidase domain protein
AMIS_RS25090	COG0247	lactate metabolic process
AMIS_RS25110	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AMIS_RS25115	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS25120	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMIS_RS25125	COG4213	ABC transporter substrate-binding protein
AMIS_RS25130	COG0395	ABC-type sugar transport system, permease component
AMIS_RS25140	COG1653	transport
AMIS_RS25155	COG0366	Alpha amylase catalytic
AMIS_RS25165	COG0009	L-threonylcarbamoyladenylate synthase
AMIS_RS25180	COG5297	Belongs to the glycosyl hydrolase family 6
AMIS_RS25180	COG4733	cellulase activity
AMIS_RS25190	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AMIS_RS25195	COG1653	transport
AMIS_RS25200	COG1175	transmembrane transport
AMIS_RS25205	COG0395	ABC-type sugar transport system, permease component
AMIS_RS25210	COG0577	efflux transmembrane transporter activity
AMIS_RS25210	COG1136	(ABC) transporter
AMIS_RS25215	COG1136	(ABC) transporter
AMIS_RS25240	COG2205	protein histidine kinase activity
AMIS_RS25245	COG0745	RESPONSE REGULATOR receiver
AMIS_RS25310	COG1174	glycine betaine transport
AMIS_RS25315	COG1174	glycine betaine transport
AMIS_RS25340	COG1609	Transcriptional regulator
AMIS_RS25345	COG2986	histidine ammonia-lyase
AMIS_RS25360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS25385	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMIS_RS25400	COG1309	transcriptional regulator
AMIS_RS25410	COG2205	protein histidine kinase activity
AMIS_RS25415	COG0745	RESPONSE REGULATOR receiver
AMIS_RS25430	COG0745	RESPONSE REGULATOR receiver
AMIS_RS25435	COG2205	protein histidine kinase activity
AMIS_RS25455	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMIS_RS25460	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMIS_RS25480	COG1716	ATPase activity
AMIS_RS25520	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
AMIS_RS25525	COG0384	phenazine biosynthesis protein PhzF
AMIS_RS25530	COG3467	pyridoxamine 5'-phosphate
AMIS_RS25535	COG0488	(ABC) transporter
AMIS_RS25550	COG1649	PFAM Uncharacterised BCR, COG1649
AMIS_RS25555	COG0297	glycogen (starch) synthase activity
AMIS_RS25560	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMIS_RS25620	COG2501	S4 domain
AMIS_RS25635	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMIS_RS25640	COG1366	Belongs to the anti-sigma-factor antagonist family
AMIS_RS25645	COG1940	carbohydrate kinase activity
AMIS_RS25660	COG4214	carbohydrate transport
AMIS_RS25665	COG1129	ABC transporter
AMIS_RS25670	COG4213	ABC transporter substrate-binding protein
AMIS_RS25675	COG2160	L-arabinose isomerase activity
AMIS_RS25680	COG1609	Transcriptional regulator
AMIS_RS25720	COG0577	efflux transmembrane transporter activity
AMIS_RS25720	COG1136	(ABC) transporter
AMIS_RS25725	COG0577	efflux transmembrane transporter activity
AMIS_RS25725	COG1136	(ABC) transporter
AMIS_RS25730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMIS_RS25740	COG2340	Cysteine-rich secretory protein family
AMIS_RS25765	COG0840	transmembrane signaling receptor activity
AMIS_RS25775	COG2201	protein-glutamate methylesterase activity
AMIS_RS25790	COG0577	efflux transmembrane transporter activity
AMIS_RS25790	COG1136	(ABC) transporter
AMIS_RS25795	COG0577	efflux transmembrane transporter activity
AMIS_RS25795	COG1136	(ABC) transporter
AMIS_RS25805	COG2197	response regulator
AMIS_RS25810	COG3551	Protein conserved in bacteria
AMIS_RS25820	COG0583	DNA-binding transcription factor activity
AMIS_RS25850	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AMIS_RS25855	COG2154	pterin-4-alpha-carbinolamine dehydratase
AMIS_RS25885	COG0671	phosphoesterase, PA-phosphatase related
AMIS_RS25900	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMIS_RS25930	COG1280	lysine exporter protein (LysE YggA)
AMIS_RS25955	COG3842	ATPase activity
AMIS_RS25965	COG3551	Protein conserved in bacteria
AMIS_RS25985	COG2197	response regulator
AMIS_RS25990	COG1120	ATPase activity
AMIS_RS25995	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS26000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS26005	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AMIS_RS26015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS26020	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS26025	COG1120	ATPase activity
AMIS_RS26030	COG0840	transmembrane signaling receptor activity
AMIS_RS26035	COG0579	oxidoreductase
AMIS_RS26050	COG2205	protein histidine kinase activity
AMIS_RS26055	COG0745	RESPONSE REGULATOR receiver
AMIS_RS26065	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS26065	COG1017	nitric oxide dioxygenase activity
AMIS_RS26150	COG1136	(ABC) transporter
AMIS_RS26150	COG0577	efflux transmembrane transporter activity
AMIS_RS26155	COG4585	Histidine kinase
AMIS_RS26180	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AMIS_RS26185	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS26195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMIS_RS26205	COG0515	serine threonine protein kinase
AMIS_RS26225	COG3903	Transcriptional regulator
AMIS_RS26225	COG3629	intracellular signal transduction
AMIS_RS26260	COG1022	Amp-dependent synthetase and ligase
AMIS_RS26285	COG0546	phosphoglycolate phosphatase activity
AMIS_RS26305	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMIS_RS26315	COG2378	regulation of single-species biofilm formation
AMIS_RS26340	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AMIS_RS26345	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AMIS_RS26350	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AMIS_RS26360	COG4122	O-methyltransferase activity
AMIS_RS26370	COG1222	aaa ATPase
AMIS_RS26390	COG1994	Peptidase M50
AMIS_RS26390	COG0517	IMP dehydrogenase activity
AMIS_RS26400	COG2197	response regulator
AMIS_RS26410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS26420	COG0667	Aldo Keto reductase
AMIS_RS26425	COG0577	efflux transmembrane transporter activity
AMIS_RS26425	COG1136	(ABC) transporter
AMIS_RS26430	COG1136	(ABC) transporter
AMIS_RS26430	COG0577	efflux transmembrane transporter activity
AMIS_RS26475	COG2197	response regulator
AMIS_RS26480	COG3415	Transposase
AMIS_RS26480	COG2801	Transposase and inactivated derivatives
AMIS_RS26490	COG4585	Histidine kinase
AMIS_RS26495	COG2197	response regulator
AMIS_RS26505	COG0215	cysteine-tRNA ligase activity
AMIS_RS26520	COG0588	phosphoglycerate mutase activity
AMIS_RS26525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS26530	COG0667	Aldo Keto reductase
AMIS_RS26545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS26560	COG0542	response to heat
AMIS_RS26615	COG0745	RESPONSE REGULATOR receiver
AMIS_RS26625	COG0653	protein targeting
AMIS_RS26635	COG0673	inositol 2-dehydrogenase activity
AMIS_RS26640	COG0463	Glycosyl transferase, family 2
AMIS_RS26655	COG2201	protein-glutamate methylesterase activity
AMIS_RS26670	COG1191	sigma factor activity
AMIS_RS26695	COG1797	cobyrinic acid a,c-diamide synthase activity
AMIS_RS26710	COG1070	Carbohydrate kinase
AMIS_RS26765	COG1643	Atp-dependent helicase
AMIS_RS26770	COG1316	TRANSCRIPTIONal
AMIS_RS26775	COG0784	Response regulator, receiver
AMIS_RS26780	COG4251	negative regulation of phosphorylation
AMIS_RS26805	COG1940	carbohydrate kinase activity
AMIS_RS26840	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMIS_RS26845	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS26860	COG2183	response to ionizing radiation
AMIS_RS26875	COG4115	mRNA cleavage
AMIS_RS26915	COG5297	Belongs to the glycosyl hydrolase family 6
AMIS_RS26920	COG5001	Diguanylate cyclase
AMIS_RS26930	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS26945	COG0584	glycerophosphoryl diester phosphodiesterase
AMIS_RS26975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS26985	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMIS_RS26995	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS27005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMIS_RS27010	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMIS_RS27030	COG5001	Diguanylate cyclase
AMIS_RS27040	COG0515	serine threonine protein kinase
AMIS_RS27050	COG4977	sequence-specific DNA binding
AMIS_RS27060	COG1609	Transcriptional regulator
AMIS_RS27070	COG4106	trans-aconitate 2-methyltransferase activity
AMIS_RS27090	COG3866	Pectate lyase
AMIS_RS27100	COG0673	inositol 2-dehydrogenase activity
AMIS_RS27105	COG0246	Mannitol dehydrogenase
AMIS_RS27110	COG1904	glucuronate isomerase
AMIS_RS27115	COG0673	inositol 2-dehydrogenase activity
AMIS_RS27120	COG1609	Transcriptional regulator
AMIS_RS27130	COG1175	transmembrane transport
AMIS_RS27135	COG0395	ABC-type sugar transport system, permease component
AMIS_RS27165	COG1464	Belongs to the NlpA lipoprotein family
AMIS_RS27170	COG2011	ABC-type metal ion transport system permease component
AMIS_RS27175	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMIS_RS27180	COG2197	response regulator
AMIS_RS27185	COG4585	Histidine kinase
AMIS_RS27205	COG1486	melibiose metabolic process
AMIS_RS27230	COG0840	transmembrane signaling receptor activity
AMIS_RS27235	COG0477	Major facilitator Superfamily
AMIS_RS27255	COG1017	nitric oxide dioxygenase activity
AMIS_RS27255	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS27270	COG0840	transmembrane signaling receptor activity
AMIS_RS27285	COG0395	ABC-type sugar transport system, permease component
AMIS_RS27290	COG0395	ABC-type sugar transport system, permease component
AMIS_RS27295	COG1609	Transcriptional regulator
AMIS_RS27315	COG0640	Transcriptional regulator
AMIS_RS27335	COG2409	Drug exporters of the RND superfamily
AMIS_RS27360	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AMIS_RS27375	COG2160	L-arabinose isomerase activity
AMIS_RS27380	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS27385	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS27395	COG1879	ABC-type sugar transport system periplasmic component
AMIS_RS27400	COG1609	Transcriptional regulator
AMIS_RS27410	COG0235	Class ii aldolase
AMIS_RS27440	COG2130	NADP-dependent
AMIS_RS27445	COG1309	transcriptional regulator
AMIS_RS27450	COG0569	domain protein
AMIS_RS27470	COG0840	transmembrane signaling receptor activity
AMIS_RS27475	COG1316	TRANSCRIPTIONal
AMIS_RS27500	COG1131	(ABC) transporter
AMIS_RS27580	COG0583	DNA-binding transcription factor activity
AMIS_RS27585	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS27595	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS27610	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS27615	COG1414	Transcriptional regulator
AMIS_RS27625	COG0656	L-ascorbic acid biosynthetic process
AMIS_RS27635	COG3458	cephalosporin-C deacetylase activity
AMIS_RS27640	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AMIS_RS27665	COG1461	Dihydroxyacetone kinase
AMIS_RS27670	COG2376	Dihydroxyacetone kinase
AMIS_RS27675	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMIS_RS27675	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMIS_RS27675	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
AMIS_RS27685	COG0183	Belongs to the thiolase family
AMIS_RS27690	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS27700	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS27705	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS27710	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS27725	COG3634	alkyl hydroperoxide reductase activity
AMIS_RS27730	COG1396	sequence-specific DNA binding
AMIS_RS27735	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMIS_RS27760	COG3940	Belongs to the glycosyl hydrolase 43 family
AMIS_RS27765	COG1959	2 iron, 2 sulfur cluster binding
AMIS_RS27775	COG2072	flavoprotein involved in K transport
AMIS_RS27810	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS27820	COG0154	amidase activity
AMIS_RS27840	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS27845	COG0444	Belongs to the ABC transporter superfamily
AMIS_RS27850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS27855	COG0601	transmembrane transport
AMIS_RS27870	COG1309	transcriptional regulator
AMIS_RS27875	COG0477	Major facilitator Superfamily
AMIS_RS27885	COG1086	Polysaccharide biosynthesis protein
AMIS_RS27890	COG0489	protein tyrosine kinase activity
AMIS_RS27900	COG3959	Transketolase, thiamine diphosphate binding domain
AMIS_RS27905	COG3958	Transketolase
AMIS_RS27915	COG1215	transferase activity, transferring glycosyl groups
AMIS_RS27940	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMIS_RS28025	COG1252	NADH dehydrogenase
AMIS_RS28030	COG1435	thymidine kinase activity
AMIS_RS28065	COG2301	Belongs to the HpcH HpaI aldolase family
AMIS_RS28070	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS28080	COG0183	Belongs to the thiolase family
AMIS_RS28125	COG1414	Transcriptional regulator
AMIS_RS28135	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS28140	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS28155	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS28195	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS28255	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMIS_RS28260	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMIS_RS28285	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS28290	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS28295	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMIS_RS28300	COG1335	isochorismatase
AMIS_RS28315	COG0471	metal ion transport
AMIS_RS28340	COG1595	DNA-templated transcription, initiation
AMIS_RS28375	COG0395	ABC-type sugar transport system, permease component
AMIS_RS28385	COG1609	Transcriptional regulator
AMIS_RS28435	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMIS_RS28440	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMIS_RS28440	COG1213	nucleotidyl transferase
AMIS_RS28470	COG1937	Protein conserved in bacteria
AMIS_RS28490	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMIS_RS28495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS28520	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AMIS_RS28525	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMIS_RS28535	COG1414	Transcriptional regulator
AMIS_RS28540	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMIS_RS28590	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMIS_RS28640	COG1063	alcohol dehydrogenase
AMIS_RS28670	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMIS_RS28680	COG1086	Polysaccharide biosynthesis protein
AMIS_RS28685	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS28695	COG2197	response regulator
AMIS_RS28715	COG0477	Major facilitator Superfamily
AMIS_RS28725	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMIS_RS28770	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS28785	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMIS_RS28790	COG4565	transcriptional regulatory protein
AMIS_RS28795	COG3290	protein histidine kinase activity
AMIS_RS28800	COG1301	dicarboxylic acid transport
AMIS_RS28830	COG0569	domain protein
AMIS_RS28835	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AMIS_RS28865	COG0542	response to heat
AMIS_RS28875	COG2936	dipeptidyl-peptidase activity
AMIS_RS28890	COG1752	Esterase of the alpha-beta hydrolase superfamily
AMIS_RS28900	COG1011	Hydrolase
AMIS_RS28915	COG1216	Glycosyl transferase, family 2
AMIS_RS28920	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AMIS_RS28980	COG0667	Aldo Keto reductase
AMIS_RS29025	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMIS_RS29080	COG0709	Synthesizes selenophosphate from selenide and ATP
AMIS_RS29090	COG2318	DinB family
AMIS_RS29105	COG0437	4 iron, 4 sulfur cluster binding
AMIS_RS29110	COG0243	molybdopterin cofactor binding
AMIS_RS29110	COG3383	formate dehydrogenase (NAD+) activity
AMIS_RS29115	COG0243	molybdopterin cofactor binding
AMIS_RS29125	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS29180	COG1309	transcriptional regulator
AMIS_RS29190	COG4977	sequence-specific DNA binding
AMIS_RS29320	COG2188	Transcriptional regulator
AMIS_RS29325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMIS_RS29395	COG1846	Transcriptional regulator
AMIS_RS29405	COG1309	transcriptional regulator
AMIS_RS29410	COG4221	oxidoreductase activity
AMIS_RS29415	COG2226	methyltransferase
AMIS_RS29425	COG0024	Methionine aminopeptidase
AMIS_RS29435	COG3104	oligopeptide transport
AMIS_RS29455	COG4948	Mandelate Racemase Muconate Lactonizing
AMIS_RS29460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMIS_RS29465	COG0395	ABC-type sugar transport system, permease component
AMIS_RS29470	COG1175	transmembrane transport
AMIS_RS29475	COG1653	transport
AMIS_RS29480	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMIS_RS29490	COG1414	Transcriptional regulator
AMIS_RS29500	COG4124	Belongs to the glycosyl hydrolase 26 family
AMIS_RS29515	COG1175	transmembrane transport
AMIS_RS29560	COG3321	synthase
AMIS_RS29560	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS29560	COG0604	alcohol dehydrogenase
AMIS_RS29565	COG0641	radical SAM
AMIS_RS29575	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMIS_RS29625	COG0210	DNA helicase
AMIS_RS29630	COG0515	serine threonine protein kinase
AMIS_RS29635	COG0210	DNA helicase
AMIS_RS29655	COG0515	serine threonine protein kinase
AMIS_RS29655	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMIS_RS29690	COG4941	Belongs to the sigma-70 factor family
AMIS_RS29705	COG1160	GTP binding
AMIS_RS29710	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMIS_RS29725	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMIS_RS29730	COG2814	Major facilitator Superfamily
AMIS_RS29765	COG3655	Transcriptional regulator
AMIS_RS29830	COG0183	Belongs to the thiolase family
AMIS_RS29835	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMIS_RS29835	COG1024	Enoyl-CoA hydratase
AMIS_RS29860	COG1132	(ABC) transporter
AMIS_RS29865	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS29870	COG3300	MHYT domain
AMIS_RS29870	COG5001	Diguanylate cyclase
AMIS_RS29890	COG2814	Major facilitator Superfamily
AMIS_RS29910	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMIS_RS29920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS29925	COG2226	methyltransferase
AMIS_RS29965	COG0494	nUDIX hydrolase
AMIS_RS29970	COG0504	CTP synthase activity
AMIS_RS30010	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMIS_RS30035	COG0840	transmembrane signaling receptor activity
AMIS_RS30045	COG0647	UMP catabolic process
AMIS_RS30075	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMIS_RS30080	COG2326	polyphosphate kinase activity
AMIS_RS30085	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMIS_RS30090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMIS_RS30095	COG1063	alcohol dehydrogenase
AMIS_RS30100	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMIS_RS30100	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMIS_RS30105	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMIS_RS30105	COG2213	PTS system mannitol-specific
AMIS_RS30115	COG1105	Belongs to the carbohydrate kinase PfkB family
AMIS_RS30120	COG1349	DNA-binding transcription factor activity
AMIS_RS30170	COG2094	Belongs to the DNA glycosylase MPG family
AMIS_RS30180	COG3973	AAA domain
AMIS_RS30205	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AMIS_RS30210	COG0406	alpha-ribazole phosphatase activity
AMIS_RS30220	COG0730	response to heat
AMIS_RS30235	COG1802	Transcriptional regulator
AMIS_RS30255	COG3833	ABC-type maltose transport systems, permease component
AMIS_RS30260	COG1175	transmembrane transport
AMIS_RS30275	COG0165	Argininosuccinate lyase
AMIS_RS30280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS30285	COG0137	argininosuccinate synthase activity
AMIS_RS30300	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMIS_RS30305	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMIS_RS30310	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AMIS_RS30315	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AMIS_RS30320	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AMIS_RS30340	COG1733	regulation of RNA biosynthetic process
AMIS_RS30345	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS30350	COG3572	ergothioneine biosynthetic process
AMIS_RS30355	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMIS_RS30365	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
AMIS_RS30380	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AMIS_RS30385	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AMIS_RS30390	COG0714	Associated with various cellular activities
AMIS_RS30395	COG3831	ATPase activity
AMIS_RS30435	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMIS_RS30435	COG0072	phenylalanine-tRNA ligase activity
AMIS_RS30440	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMIS_RS30445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMIS_RS30450	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMIS_RS30455	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AMIS_RS30460	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMIS_RS30470	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AMIS_RS30475	COG0140	phosphoribosyl-ATP diphosphatase activity
AMIS_RS30485	COG0765	amino acid transport
AMIS_RS30495	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AMIS_RS30525	COG0745	RESPONSE REGULATOR receiver
AMIS_RS30545	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMIS_RS30550	COG0242	peptide deformylase activity
AMIS_RS30560	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMIS_RS30570	COG1758	RNA polymerase activity
AMIS_RS30575	COG0194	GDP metabolic process
AMIS_RS30585	COG0284	orotidine-5'-phosphate decarboxylase activity
AMIS_RS30590	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMIS_RS30595	COG0167	dihydroorotate dehydrogenase activity
AMIS_RS30605	COG0505	Belongs to the CarA family
AMIS_RS30610	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMIS_RS30615	COG0540	Belongs to the ATCase OTCase family
AMIS_RS30620	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMIS_RS30630	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMIS_RS30635	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMIS_RS30640	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AMIS_RS30645	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMIS_RS30650	COG0542	response to heat
AMIS_RS30655	COG0726	polysaccharide deacetylase
AMIS_RS30660	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AMIS_RS30665	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AMIS_RS30675	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AMIS_RS30685	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMIS_RS30690	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMIS_RS30695	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMIS_RS30745	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AMIS_RS30770	COG3525	Glycosyl hydrolase, family 20, catalytic domain
AMIS_RS30775	COG0395	ABC-type sugar transport system, permease component
AMIS_RS30780	COG1175	transmembrane transport
AMIS_RS30795	COG3964	amidohydrolase
AMIS_RS30805	COG0515	serine threonine protein kinase
AMIS_RS30810	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMIS_RS30810	COG2755	lipolytic protein G-D-S-L family
AMIS_RS30815	COG0831	urea catabolic process
AMIS_RS30820	COG0832	Belongs to the urease beta subunit family
AMIS_RS30835	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AMIS_RS30840	COG0829	nickel cation binding
AMIS_RS30865	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMIS_RS30865	COG0189	ligase activity
AMIS_RS30870	COG4242	Belongs to the peptidase S51 family
AMIS_RS30890	COG0124	histidyl-tRNA synthetase
AMIS_RS30910	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMIS_RS30915	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMIS_RS30930	COG1862	Preprotein translocase
AMIS_RS30935	COG2255	four-way junction helicase activity
AMIS_RS30940	COG0632	four-way junction helicase activity
AMIS_RS30945	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMIS_RS30955	COG0217	transcriptional regulatory protein
AMIS_RS30960	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AMIS_RS30965	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AMIS_RS30975	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS30980	COG1560	Kdo2-lipid A biosynthetic process
AMIS_RS31015	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMIS_RS31030	COG2205	protein histidine kinase activity
AMIS_RS31040	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMIS_RS31050	COG0667	Aldo Keto reductase
AMIS_RS31060	COG1278	Cold shock
AMIS_RS31100	COG1472	Belongs to the glycosyl hydrolase 3 family
AMIS_RS31105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS31110	COG0514	ATP-dependent DNA helicase (RecQ)
AMIS_RS31120	COG0535	radical SAM domain protein
AMIS_RS31145	COG1609	Transcriptional regulator
AMIS_RS31150	COG0683	leucine binding
AMIS_RS31160	COG1079	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS31185	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMIS_RS31190	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMIS_RS31190	COG1672	PFAM Archaeal ATPase
AMIS_RS31195	COG4106	trans-aconitate 2-methyltransferase activity
AMIS_RS31230	COG2197	response regulator
AMIS_RS31250	COG0297	glycogen (starch) synthase activity
AMIS_RS31340	COG0542	response to heat
AMIS_RS31370	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AMIS_RS31380	COG4266	Belongs to the allantoicase family
AMIS_RS31385	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMIS_RS31405	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AMIS_RS31430	COG1643	Atp-dependent helicase
AMIS_RS31455	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AMIS_RS31485	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMIS_RS31535	COG2202	Pas domain
AMIS_RS31535	COG2205	protein histidine kinase activity
AMIS_RS31540	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMIS_RS31550	COG0405	Gamma-glutamyltransferase
AMIS_RS31560	COG2133	pyrroloquinoline quinone binding
AMIS_RS31575	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMIS_RS31580	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS31590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMIS_RS31630	COG1686	Belongs to the peptidase S11 family
AMIS_RS31635	COG1191	sigma factor activity
AMIS_RS31645	COG3973	AAA domain
AMIS_RS31655	COG1191	sigma factor activity
AMIS_RS31700	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMIS_RS31705	COG1609	Transcriptional regulator
AMIS_RS31715	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS31720	COG0601	transmembrane transport
AMIS_RS31725	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS31730	COG0444	Belongs to the ABC transporter superfamily
AMIS_RS31740	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMIS_RS31750	COG0656	L-ascorbic acid biosynthetic process
AMIS_RS31760	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMIS_RS31765	COG0187	DNA topoisomerase II activity
AMIS_RS31790	COG2205	protein histidine kinase activity
AMIS_RS31795	COG0745	RESPONSE REGULATOR receiver
AMIS_RS31800	COG0435	Glutathione S-transferase
AMIS_RS31820	COG0714	Associated with various cellular activities
AMIS_RS31830	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AMIS_RS31835	COG4106	trans-aconitate 2-methyltransferase activity
AMIS_RS31880	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMIS_RS31915	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMIS_RS31920	COG1017	nitric oxide dioxygenase activity
AMIS_RS31920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMIS_RS31940	COG0395	ABC-type sugar transport system, permease component
AMIS_RS31985	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMIS_RS31990	COG1136	(ABC) transporter
AMIS_RS31995	COG1136	(ABC) transporter
AMIS_RS32015	COG3201	nicotinamide mononucleotide transporter
AMIS_RS32030	COG0366	Alpha amylase catalytic
AMIS_RS32030	COG1874	Beta-galactosidase
AMIS_RS32070	COG2319	Wd-40 repeat
AMIS_RS32080	COG3629	intracellular signal transduction
AMIS_RS32085	COG0745	RESPONSE REGULATOR receiver
AMIS_RS32090	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
AMIS_RS32110	COG0604	alcohol dehydrogenase
AMIS_RS32115	COG4585	Histidine kinase
AMIS_RS32120	COG2197	response regulator
AMIS_RS32140	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AMIS_RS32145	COG3629	intracellular signal transduction
AMIS_RS32145	COG3903	Transcriptional regulator
AMIS_RS32195	COG0596	Alpha beta hydrolase
AMIS_RS32205	COG2318	DinB family
AMIS_RS32215	COG0671	phosphoesterase, PA-phosphatase related
AMIS_RS32225	COG1597	lipid kinase activity
AMIS_RS32225	COG1803	Methylglyoxal synthase
AMIS_RS32235	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMIS_RS32260	COG0745	RESPONSE REGULATOR receiver
AMIS_RS32280	COG2197	response regulator
AMIS_RS32285	COG3850	Histidine kinase
AMIS_RS32310	COG0546	phosphoglycolate phosphatase activity
AMIS_RS32320	COG1335	isochorismatase
AMIS_RS32330	COG0789	Transcriptional regulator
AMIS_RS32345	COG0800	Aldolase
AMIS_RS32365	COG1063	alcohol dehydrogenase
AMIS_RS32375	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AMIS_RS32380	COG0366	Alpha amylase catalytic
AMIS_RS32385	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS32390	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS32405	COG2226	methyltransferase
AMIS_RS32410	COG0673	inositol 2-dehydrogenase activity
AMIS_RS32425	COG3483	tryptophan 2,3-dioxygenase activity
AMIS_RS32430	COG3012	SEC-C Motif Domain Protein
AMIS_RS32435	COG0840	transmembrane signaling receptor activity
AMIS_RS32445	COG1653	transport
AMIS_RS32450	COG1175	transmembrane transport
AMIS_RS32455	COG0395	ABC-type sugar transport system, permease component
AMIS_RS32460	COG0366	Alpha amylase catalytic
AMIS_RS32470	COG0659	secondary active sulfate transmembrane transporter activity
AMIS_RS32475	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMIS_RS32485	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AMIS_RS32485	COG2308	Evidence 4 Homologs of previously reported genes of
AMIS_RS32490	COG0367	asparagine synthase
AMIS_RS32525	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMIS_RS32555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS32590	COG2197	response regulator
AMIS_RS32615	COG1131	(ABC) transporter
AMIS_RS32620	COG0328	RNA-DNA hybrid ribonuclease activity
AMIS_RS32635	COG1793	dna ligase
AMIS_RS32635	COG3285	dna ligase
AMIS_RS32645	COG4585	Histidine kinase
AMIS_RS32650	COG2197	response regulator
AMIS_RS32655	COG5001	Diguanylate cyclase
AMIS_RS32675	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMIS_RS32690	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMIS_RS32735	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS32775	COG2807	transmembrane transport
AMIS_RS32795	COG0058	SHG alpha-glucan phosphorylase activity
AMIS_RS32830	COG0142	geranyltranstransferase activity
AMIS_RS32835	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS32840	COG1082	Xylose isomerase domain protein TIM barrel
AMIS_RS32840	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AMIS_RS32845	COG1309	transcriptional regulator
AMIS_RS32850	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AMIS_RS32885	COG2304	oxidoreductase activity
AMIS_RS32890	COG2304	oxidoreductase activity
AMIS_RS32900	COG0714	Associated with various cellular activities
AMIS_RS32905	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS32910	COG3693	PFAM glycoside hydrolase, family 10
AMIS_RS32920	COG0714	Associated with various cellular activities
AMIS_RS32925	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AMIS_RS32940	COG2409	Drug exporters of the RND superfamily
AMIS_RS33025	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AMIS_RS33035	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AMIS_RS33080	COG0483	inositol monophosphate 1-phosphatase activity
AMIS_RS33095	COG4974	Belongs to the 'phage' integrase family
AMIS_RS33140	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS33210	COG0633	Ferredoxin
AMIS_RS33210	COG0543	2 iron, 2 sulfur cluster binding
AMIS_RS33270	COG3486	L-lysine 6-monooxygenase (NADPH) activity
AMIS_RS33290	COG0395	ABC-type sugar transport system, permease component
AMIS_RS33295	COG1175	transmembrane transport
AMIS_RS33300	COG1653	transport
AMIS_RS33320	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS33340	COG4447	cellulose binding
AMIS_RS33345	COG2197	response regulator
AMIS_RS33360	COG0028	Belongs to the TPP enzyme family
AMIS_RS33395	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMIS_RS33425	COG1597	lipid kinase activity
AMIS_RS33475	COG0419	ATPase involved in DNA repair
AMIS_RS33480	COG0420	3'-5' exonuclease activity
AMIS_RS33505	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AMIS_RS33510	COG0156	8-amino-7-oxononanoate synthase activity
AMIS_RS33515	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AMIS_RS33530	COG2264	protein methyltransferase activity
AMIS_RS33575	COG1793	dna ligase
AMIS_RS33585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMIS_RS33595	COG3285	dna ligase
AMIS_RS33595	COG1793	dna ligase
AMIS_RS33610	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMIS_RS33620	COG0463	Glycosyl transferase, family 2
AMIS_RS33630	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMIS_RS33635	COG0655	NAD(P)H dehydrogenase (quinone) activity
AMIS_RS33640	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMIS_RS33650	COG3253	May function as heme-dependent peroxidase
AMIS_RS33655	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AMIS_RS33660	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AMIS_RS33670	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS33675	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMIS_RS33680	COG0183	Belongs to the thiolase family
AMIS_RS33685	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMIS_RS33685	COG1024	Enoyl-CoA hydratase
AMIS_RS33695	COG2205	protein histidine kinase activity
AMIS_RS33700	COG0745	RESPONSE REGULATOR receiver
AMIS_RS33720	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMIS_RS33725	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMIS_RS33730	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMIS_RS33735	COG0531	amino acid
AMIS_RS33740	COG0569	domain protein
AMIS_RS33765	COG0756	dUTP diphosphatase activity
AMIS_RS33810	COG2860	membrane
AMIS_RS33820	COG2313	pseudouridylate synthase activity
AMIS_RS33855	COG0745	RESPONSE REGULATOR receiver
AMIS_RS33865	COG0643	Histidine kinase
AMIS_RS33865	COG0784	Response regulator, receiver
AMIS_RS33865	COG2198	Histidine kinase
AMIS_RS33865	COG0784	Response regulator, receiver
AMIS_RS33865	COG2198	Histidine kinase
AMIS_RS33865	COG0643	Histidine kinase
AMIS_RS33870	COG0745	RESPONSE REGULATOR receiver
AMIS_RS33875	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMIS_RS33885	COG2201	protein-glutamate methylesterase activity
AMIS_RS33890	COG0835	chemotaxis
AMIS_RS33895	COG0840	transmembrane signaling receptor activity
AMIS_RS33895	COG3290	protein histidine kinase activity
AMIS_RS33905	COG1490	D-aminoacyl-tRNA deacylase activity
AMIS_RS33930	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMIS_RS33965	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMIS_RS33970	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMIS_RS33975	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMIS_RS33985	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMIS_RS33995	COG0584	glycerophosphoryl diester phosphodiesterase
AMIS_RS34000	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMIS_RS34005	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMIS_RS34010	COG1196	nuclear chromosome segregation
AMIS_RS34025	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMIS_RS34035	COG1126	abc transporter atp-binding protein
AMIS_RS34040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMIS_RS34045	COG0765	amino acid transport
AMIS_RS34050	COG0765	amino acid transport
AMIS_RS34055	COG1418	mRNA catabolic process
AMIS_RS34060	COG2137	regulation of response to DNA damage stimulus
AMIS_RS34065	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMIS_RS34075	COG1573	uracil-dna glycosylase
AMIS_RS34100	COG1201	RNA secondary structure unwinding
AMIS_RS34120	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMIS_RS34130	COG1842	Phage shock protein A
AMIS_RS34135	COG1396	sequence-specific DNA binding
AMIS_RS34140	COG1546	Belongs to the CinA family
AMIS_RS34140	COG1058	Belongs to the CinA family
AMIS_RS34150	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMIS_RS34175	COG1674	ftsk spoiiie
AMIS_RS34190	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMIS_RS34195	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMIS_RS34205	COG3214	Protein conserved in bacteria
AMIS_RS34270	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AMIS_RS34280	COG0612	Peptidase, M16
AMIS_RS34285	COG1185	polyribonucleotide nucleotidyltransferase activity
AMIS_RS34290	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMIS_RS34300	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMIS_RS34310	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AMIS_RS34315	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMIS_RS34330	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMIS_RS34340	COG0195	Participates in both transcription termination and antitermination
AMIS_RS34345	COG0779	Required for maturation of 30S ribosomal subunits
AMIS_RS34385	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AMIS_RS34390	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AMIS_RS34400	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS34420	COG4585	Histidine kinase
AMIS_RS34425	COG2197	response regulator
AMIS_RS34430	COG4152	abc transporter atp-binding protein
AMIS_RS34435	COG1668	transmembrane transport
AMIS_RS34440	COG1309	transcriptional regulator
AMIS_RS34445	COG1511	domain protein
AMIS_RS34490	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AMIS_RS34495	COG0750	zinc metalloprotease
AMIS_RS34515	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMIS_RS34515	COG2146	nitrite reductase [NAD(P)H] activity
AMIS_RS34530	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMIS_RS34540	COG0233	cytoplasmic translational termination
AMIS_RS34545	COG0528	UMP kinase activity
AMIS_RS34550	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMIS_RS34555	COG0052	Belongs to the universal ribosomal protein uS2 family
AMIS_RS34565	COG0792	nuclease activity
AMIS_RS34590	COG4974	Belongs to the 'phage' integrase family
AMIS_RS34595	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMIS_RS34620	COG0681	Belongs to the peptidase S26 family
AMIS_RS34625	COG0681	Belongs to the peptidase S26 family
AMIS_RS34630	COG0335	large ribosomal subunit rRNA binding
AMIS_RS34635	COG0336	Belongs to the RNA methyltransferase TrmD family
AMIS_RS34640	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMIS_RS34645	COG1837	Belongs to the UPF0109 family
AMIS_RS34650	COG0228	four-way junction DNA binding
AMIS_RS34660	COG0442	prolyl-tRNA aminoacylation
AMIS_RS34705	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS34720	COG0463	Glycosyl transferase, family 2
AMIS_RS34740	COG1216	Glycosyl transferase, family 2
AMIS_RS34745	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMIS_RS34745	COG2755	lipolytic protein G-D-S-L family
AMIS_RS34755	COG1216	Glycosyl transferase, family 2
AMIS_RS34755	COG1442	glycosyl transferase family 8
AMIS_RS34760	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AMIS_RS34790	COG2318	DinB family
AMIS_RS34835	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMIS_RS34845	COG0571	ribonuclease III activity
AMIS_RS34850	COG0416	fatty acid biosynthetic process
AMIS_RS34855	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AMIS_RS34870	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMIS_RS34875	COG0742	ribosomal rna small subunit methyltransferase
AMIS_RS34900	COG1461	Dihydroxyacetone kinase
AMIS_RS34905	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AMIS_RS34930	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMIS_RS34945	COG0626	cystathionine gamma-synthase activity
AMIS_RS34950	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMIS_RS34960	COG1920	GTP binding
AMIS_RS34970	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMIS_RS34985	COG0776	regulation of translation
AMIS_RS34990	COG0066	3-isopropylmalate dehydratase activity
AMIS_RS35015	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMIS_RS35040	COG0702	epimerase
AMIS_RS35050	COG1476	TRANSCRIPTIONal
AMIS_RS35060	COG1131	(ABC) transporter
AMIS_RS35070	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMIS_RS35090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS35095	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS35105	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMIS_RS35110	COG0473	3-isopropylmalate dehydrogenase activity
AMIS_RS35125	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AMIS_RS35130	COG0440	acetolactate synthase activity
AMIS_RS35140	COG3300	MHYT domain
AMIS_RS35140	COG5001	Diguanylate cyclase
AMIS_RS35145	COG0129	dihydroxy-acid dehydratase activity
AMIS_RS35160	COG1175	transmembrane transport
AMIS_RS35170	COG1609	Transcriptional regulator
AMIS_RS35185	COG2133	pyrroloquinoline quinone binding
AMIS_RS35200	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMIS_RS35205	COG0154	amidase activity
AMIS_RS35210	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMIS_RS35220	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMIS_RS35230	COG0482	sulfurtransferase activity
AMIS_RS35240	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AMIS_RS35245	COG2086	electron transfer activity
AMIS_RS35250	COG2149	membrane
AMIS_RS35270	COG0443	Heat shock 70 kDa protein
AMIS_RS35295	COG0840	transmembrane signaling receptor activity
AMIS_RS35300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMIS_RS35305	COG1119	ATPase activity
AMIS_RS35325	COG2902	Dehydrogenase
AMIS_RS35335	COG0010	Belongs to the arginase family
AMIS_RS35340	COG3118	belongs to the thioredoxin family
AMIS_RS35345	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS35345	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS35365	COG0183	Belongs to the thiolase family
AMIS_RS35370	COG0346	lactoylglutathione lyase activity
AMIS_RS35405	COG4133	protoheme IX ABC transporter activity
AMIS_RS35415	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
AMIS_RS35430	COG1674	ftsk spoiiie
AMIS_RS35445	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMIS_RS35465	COG0384	phenazine biosynthesis protein PhzF
AMIS_RS35475	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AMIS_RS35485	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMIS_RS35490	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMIS_RS35495	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMIS_RS35500	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMIS_RS35505	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMIS_RS35510	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMIS_RS35515	COG0356	it plays a direct role in the translocation of protons across the membrane
AMIS_RS35525	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMIS_RS35530	COG0702	epimerase
AMIS_RS35535	COG0009	L-threonylcarbamoyladenylate synthase
AMIS_RS35540	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMIS_RS35550	COG2890	protein-(glutamine-N5) methyltransferase activity
AMIS_RS35570	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMIS_RS35575	COG0254	rRNA binding
AMIS_RS35595	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AMIS_RS35605	COG0083	homoserine kinase activity
AMIS_RS35615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMIS_RS35640	COG0018	arginyl-trna synthetase
AMIS_RS35650	COG0460	homoserine dehydrogenase
AMIS_RS35655	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AMIS_RS35660	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMIS_RS35670	COG3469	chitinase activity
AMIS_RS35685	COG0515	serine threonine protein kinase
AMIS_RS35710	COG1742	UPF0060 membrane protein
AMIS_RS35750	COG0754	glutathionylspermidine amidase activity
AMIS_RS35760	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS35765	COG0366	Alpha amylase catalytic
AMIS_RS35785	COG0586	Pfam SNARE associated Golgi protein
AMIS_RS35790	COG3469	chitinase activity
AMIS_RS35805	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AMIS_RS35820	COG0740	serine-type endopeptidase activity
AMIS_RS35830	COG1834	amidinotransferase
AMIS_RS35835	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMIS_RS35865	COG3118	belongs to the thioredoxin family
AMIS_RS35885	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS35890	COG2205	protein histidine kinase activity
AMIS_RS35895	COG0745	RESPONSE REGULATOR receiver
AMIS_RS35915	COG0567	Dehydrogenase, E1 component
AMIS_RS35915	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMIS_RS35925	COG0857	belongs to the CobB CobQ family
AMIS_RS35925	COG0280	phosphate acetyltransferase
AMIS_RS35930	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMIS_RS35935	COG1064	alcohol dehydrogenase
AMIS_RS35955	COG2172	sigma factor antagonist activity
AMIS_RS35960	COG2188	Transcriptional regulator
AMIS_RS35970	COG1597	lipid kinase activity
AMIS_RS35985	COG0175	sulfate reduction
AMIS_RS35990	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMIS_RS36005	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMIS_RS36015	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AMIS_RS36025	COG1595	DNA-templated transcription, initiation
AMIS_RS36040	COG2135	peptidase activity
AMIS_RS36045	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AMIS_RS36050	COG1162	GTPase activity
AMIS_RS36055	COG0483	inositol monophosphate 1-phosphatase activity
AMIS_RS36125	COG1357	PFAM Pentapeptide repeats (8 copies)
AMIS_RS36140	COG1615	UPF0182 protein
AMIS_RS36145	COG3480	Lon protease (S16) C-terminal proteolytic domain
AMIS_RS36170	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMIS_RS36200	COG2816	NAD+ diphosphatase activity
AMIS_RS36215	COG1959	2 iron, 2 sulfur cluster binding
AMIS_RS36225	COG1116	anion transmembrane transporter activity
AMIS_RS36245	COG1278	Cold shock
AMIS_RS36260	COG1074	ATP-dependent DNA helicase activity
AMIS_RS36270	COG1611	Belongs to the LOG family
AMIS_RS36275	COG1611	Belongs to the LOG family
AMIS_RS36285	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMIS_RS36290	COG2171	N-acyltransferase activity
AMIS_RS36360	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AMIS_RS36365	COG0823	Involved in the tonB-independent uptake of proteins
AMIS_RS36365	COG1506	peptidase
AMIS_RS36375	COG0312	modulator of DNA gyrase
AMIS_RS36390	COG1053	succinate dehydrogenase
AMIS_RS36435	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS36445	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS36470	COG2188	Transcriptional regulator
AMIS_RS36475	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AMIS_RS36490	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS36585	COG0012	GTP binding
AMIS_RS36600	COG2169	Transcriptional regulator
AMIS_RS36600	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AMIS_RS36605	COG0525	valine-tRNA ligase activity
AMIS_RS36620	COG1322	Protein conserved in bacteria
AMIS_RS36625	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AMIS_RS36640	COG1570	exodeoxyribonuclease VII activity
AMIS_RS36645	COG1722	exodeoxyribonuclease VII activity
AMIS_RS36660	COG0705	Rhomboid family
AMIS_RS36675	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AMIS_RS36680	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMIS_RS36680	COG0561	phosphatase activity
AMIS_RS36685	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMIS_RS36695	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
AMIS_RS36730	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMIS_RS36745	COG0515	serine threonine protein kinase
AMIS_RS36745	COG2815	serine threonine protein kinase
AMIS_RS36760	COG0424	maF-like protein
AMIS_RS36765	COG4770	biotin carboxylase activity
AMIS_RS36810	COG1473	amidohydrolase
AMIS_RS36810	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AMIS_RS36815	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS36815	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMIS_RS36820	COG2815	serine threonine protein kinase
AMIS_RS36820	COG0515	serine threonine protein kinase
AMIS_RS36825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMIS_RS36835	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AMIS_RS36840	COG1051	belongs to the nudix hydrolase family
AMIS_RS36845	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMIS_RS36855	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS36860	COG1012	belongs to the aldehyde dehydrogenase family
AMIS_RS36885	COG2018	Roadblock/LC7 domain
AMIS_RS36895	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMIS_RS36920	COG1079	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS36925	COG4603	Belongs to the binding-protein-dependent transport system permease family
AMIS_RS36935	COG1744	ABC transporter substrate-binding protein PnrA-like
AMIS_RS36960	COG0180	Tryptophanyl-tRNA synthetase
AMIS_RS36965	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMIS_RS36970	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMIS_RS36995	COG1218	3'(2'),5'-bisphosphate nucleotidase
AMIS_RS37005	COG0193	aminoacyl-tRNA hydrolase activity
AMIS_RS37020	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMIS_RS37045	COG0488	(ABC) transporter
AMIS_RS37050	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMIS_RS37060	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AMIS_RS37070	COG0084	hydrolase, TatD family'
AMIS_RS37085	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMIS_RS37110	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AMIS_RS37160	COG0303	'Molybdopterin
AMIS_RS37165	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AMIS_RS37175	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMIS_RS37215	COG2095	MarC family integral membrane protein
AMIS_RS37220	COG0613	PHP domain protein
AMIS_RS37240	COG3118	belongs to the thioredoxin family
AMIS_RS37270	COG0546	phosphoglycolate phosphatase activity
AMIS_RS37280	COG0384	phenazine biosynthesis protein PhzF
AMIS_RS37285	COG2239	Acts as a magnesium transporter
AMIS_RS37300	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMIS_RS37305	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMIS_RS37315	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMIS_RS37325	COG1024	Enoyl-CoA hydratase
AMIS_RS37335	COG0519	Catalyzes the synthesis of GMP from XMP
AMIS_RS37350	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMIS_RS37355	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMIS_RS37355	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AMIS_RS37360	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMIS_RS37365	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMIS_RS37395	COG0113	porphobilinogen synthase activity
AMIS_RS37405	COG0181	hydroxymethylbilane synthase activity
AMIS_RS37410	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMIS_RS37415	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AMIS_RS37430	COG0318	PFAM AMP-dependent synthetase and ligase
AMIS_RS37435	COG1595	DNA-templated transcription, initiation
AMIS_RS37460	COG0506	proline dehydrogenase activity
AMIS_RS37470	COG1082	Xylose isomerase domain protein TIM barrel
AMIS_RS37495	COG0588	phosphoglycerate mutase activity
AMIS_RS37510	COG0438	transferase activity, transferring glycosyl groups
AMIS_RS37525	COG0745	RESPONSE REGULATOR receiver
AMIS_RS37540	COG5002	protein histidine kinase activity
AMIS_RS37560	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AMIS_RS37565	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
AMIS_RS37575	COG1256	bacterial-type flagellum assembly
AMIS_RS37575	COG4786	Flagellar basal body rod
AMIS_RS37605	COG1815	bacterial-type flagellum-dependent cell motility
AMIS_RS37615	COG1677	Flagellar hook-basal body complex protein FliE
AMIS_RS37620	COG1766	The M ring may be actively involved in energy transduction
AMIS_RS37625	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMIS_RS37635	COG1157	protein secretion by the type III secretion system
AMIS_RS37645	COG1196	nuclear chromosome segregation
AMIS_RS37645	COG0741	lytic transglycosylase activity
AMIS_RS37645	COG0739	heme binding
AMIS_RS37670	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMIS_RS37675	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMIS_RS37685	COG1338	Plays a role in the flagellum-specific transport system
AMIS_RS37695	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMIS_RS37695	COG1776	CheC inhibitor of MCP methylation
AMIS_RS37715	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AMIS_RS37725	COG1749	Flagellar hook protein flgE
AMIS_RS37730	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AMIS_RS37750	COG0745	RESPONSE REGULATOR receiver
AMIS_RS37760	COG2201	protein-glutamate methylesterase activity
AMIS_RS37780	COG0745	RESPONSE REGULATOR receiver
AMIS_RS37785	COG2340	Cysteine-rich secretory protein family
AMIS_RS37790	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AMIS_RS37810	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
AMIS_RS37845	COG3246	L-lysine catabolic process to acetate
AMIS_RS37855	COG0735	belongs to the Fur family
AMIS_RS37865	COG4044	May play a role in the intracellular transport of hydrophobic ligands
AMIS_RS37885	COG1051	belongs to the nudix hydrolase family
AMIS_RS37900	COG1595	DNA-templated transcription, initiation
AMIS_RS37915	COG0306	phosphate transporter
AMIS_RS37930	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AMIS_RS37945	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AMIS_RS37955	COG0456	acetyltransferase
AMIS_RS37960	COG0745	RESPONSE REGULATOR receiver
AMIS_RS37995	COG2339	peptidase activity
AMIS_RS38000	COG4129	membrane
AMIS_RS38025	COG0459	protein refolding
AMIS_RS38040	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AMIS_RS38050	COG1131	(ABC) transporter
AMIS_RS38060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMIS_RS38075	COG1131	(ABC) transporter
AMIS_RS38080	COG1349	DNA-binding transcription factor activity
AMIS_RS38140	COG3842	ATPase activity
AMIS_RS38155	COG1278	Cold shock
AMIS_RS38165	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMIS_RS38170	COG0215	cysteine-tRNA ligase activity
AMIS_RS38175	COG1404	Belongs to the peptidase S8 family
AMIS_RS38180	COG0114	fumarate hydratase activity
AMIS_RS38195	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AMIS_RS38195	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AMIS_RS38215	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMIS_RS38255	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AMIS_RS38260	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AMIS_RS38285	COG1960	acyl-CoA dehydrogenase activity
AMIS_RS38290	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMIS_RS38305	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMIS_RS38310	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AMIS_RS38325	COG0242	peptide deformylase activity
AMIS_RS38330	COG3830	Belongs to the UPF0237 family
AMIS_RS38355	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AMIS_RS38360	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AMIS_RS38370	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AMIS_RS38380	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AMIS_RS38385	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AMIS_RS38400	COG0649	NAD binding
AMIS_RS38435	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMIS_RS38440	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMIS_RS38470	COG1196	nuclear chromosome segregation
AMIS_RS38470	COG0741	lytic transglycosylase activity
AMIS_RS38470	COG0739	heme binding
AMIS_RS38500	COG1674	ftsk spoiiie
AMIS_RS38515	COG0302	gtp cyclohydrolase
AMIS_RS38520	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMIS_RS38525	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMIS_RS38530	COG0037	tRNA processing
AMIS_RS38540	COG2027	D-alanyl-D-alanine carboxypeptidase
AMIS_RS38545	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMIS_RS38555	COG1674	ftsk spoiiie
AMIS_RS38580	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMIS_RS38615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMIS_RS38635	COG0003	Pfam Anion-transporting ATPase
AMIS_RS38650	COG1610	YqeY-like protein
AMIS_RS38655	COG1408	metallophosphoesterase
AMIS_RS38670	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMIS_RS38675	COG1324	tolerance protein
AMIS_RS38695	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMIS_RS38720	COG4608	Belongs to the ABC transporter superfamily
AMIS_RS38725	COG0444	Belongs to the ABC transporter superfamily
AMIS_RS38735	COG0747	negative chemotaxis
AMIS_RS38740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMIS_RS38745	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMIS_RS38750	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMIS_RS38800	COG0813	purine-nucleoside phosphorylase activity
AMIS_RS38805	COG0590	tRNA wobble adenosine to inosine editing
AMIS_RS38825	COG0287	Prephenate dehydrogenase
AMIS_RS38830	COG2318	DinB family
AMIS_RS38835	COG0235	Class ii aldolase
AMIS_RS38835	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AMIS_RS38840	COG1796	DNA polymerase
AMIS_RS38840	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AMIS_RS38855	COG0642	Histidine kinase
AMIS_RS38860	COG2018	Roadblock/LC7 domain
AMIS_RS38925	COG3706	GGDEF domain
AMIS_RS38965	COG0778	Nitroreductase
AMIS_RS38970	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AMIS_RS39025	COG1268	BioY protein
AMIS_RS39035	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMIS_RS39060	COG0667	Aldo Keto reductase
AMIS_RS39075	COG0673	inositol 2-dehydrogenase activity
AMIS_RS39085	COG3831	ATPase activity
AMIS_RS39110	COG4558	Periplasmic binding protein
AMIS_RS39115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMIS_RS39120	COG1120	ATPase activity
AMIS_RS39160	COG2132	Multicopper oxidase
AMIS_RS39210	COG1028	Short-chain dehydrogenase reductase Sdr
AMIS_RS39225	COG0745	RESPONSE REGULATOR receiver
AMIS_RS39230	COG2205	protein histidine kinase activity
AMIS_RS39245	COG0577	efflux transmembrane transporter activity
AMIS_RS39245	COG1136	(ABC) transporter
AMIS_RS39260	COG1131	(ABC) transporter
AMIS_RS39275	COG2197	response regulator
AMIS_RS39300	COG1131	(ABC) transporter
AMIS_RS39310	COG2197	response regulator
AMIS_RS39315	COG0596	Alpha beta hydrolase
AMIS_RS39325	COG3629	intracellular signal transduction
AMIS_RS39325	COG3903	Transcriptional regulator
AMIS_RS39330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMIS_RS39340	COG2755	lipolytic protein G-D-S-L family
AMIS_RS39345	COG0789	Transcriptional regulator
AMIS_RS39345	COG4978	Transcriptional regulator
AMIS_RS39350	COG2197	response regulator
AMIS_RS39355	COG4585	Histidine kinase
AMIS_RS39380	COG4585	Histidine kinase
AMIS_RS39385	COG2197	response regulator
AMIS_RS39430	COG0583	DNA-binding transcription factor activity
AMIS_RS39455	COG0657	acetylesterase activity
AMIS_RS39460	COG1073	alpha beta
AMIS_RS39495	COG0242	peptide deformylase activity
AMIS_RS39540	COG0789	Transcriptional regulator
AMIS_RS39545	COG3959	Transketolase, thiamine diphosphate binding domain
AMIS_RS39550	COG3958	Transketolase
AMIS_RS39565	COG0705	Rhomboid family
AMIS_RS39565	COG0457	Tetratricopeptide repeat
AMIS_RS39570	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMIS_RS39585	COG0598	Magnesium transport protein CorA
AMIS_RS39590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS39600	COG0371	Dehydrogenase
AMIS_RS39620	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMIS_RS39625	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMIS_RS39630	COG3275	phosphorelay sensor kinase activity
AMIS_RS39640	COG0745	RESPONSE REGULATOR receiver
AMIS_RS39645	COG2205	protein histidine kinase activity
AMIS_RS39655	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMIS_RS39690	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMIS_RS39725	COG2235	arginine
AMIS_RS39765	COG1764	response to oxidative stress
AMIS_RS39775	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMIS_RS39780	COG0561	phosphatase activity
AMIS_RS39785	COG0561	phosphatase activity
AMIS_RS39795	COG1834	amidinotransferase
AMIS_RS39800	COG1522	sequence-specific DNA binding
AMIS_RS39820	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AMIS_RS39845	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMIS_RS39860	COG1408	metallophosphoesterase
AMIS_RS39905	COG0521	Mo-molybdopterin cofactor biosynthetic process
AMIS_RS39905	COG0315	cyclic pyranopterin monophosphate synthase activity
AMIS_RS39910	COG0315	cyclic pyranopterin monophosphate synthase activity
AMIS_RS39915	COG5001	Diguanylate cyclase
AMIS_RS39935	COG0305	Participates in initiation and elongation during chromosome replication
AMIS_RS39945	COG0359	binds to the 23S rRNA
AMIS_RS39950	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMIS_RS39960	COG0360	Binds together with S18 to 16S ribosomal RNA
AMIS_RS39985	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMIS_RS39995	COG1695	Transcriptional regulator
AMIS_RS40010	COG1595	DNA-templated transcription, initiation
AMIS_RS40030	COG0617	tRNA 3'-terminal CCA addition
AMIS_RS40045	COG0515	serine threonine protein kinase
AMIS_RS40045	COG2815	serine threonine protein kinase
AMIS_RS40050	COG1595	DNA-templated transcription, initiation
AMIS_RS40060	COG0492	ferredoxin-NADP+ reductase activity
AMIS_RS40065	COG3118	belongs to the thioredoxin family
AMIS_RS40070	COG3409	Peptidoglycan-binding domain 1 protein
AMIS_RS40070	COG0860	N-Acetylmuramoyl-L-alanine amidase
AMIS_RS40080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMIS_RS40085	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMIS_RS40100	COG1192	Involved in chromosome partitioning
AMIS_RS40105	COG0357	Ribosomal RNA small subunit methyltransferase G
AMIS_RS40115	COG0706	membrane insertase activity
AMIS_RS40120	COG0594	ribonuclease P activity
AMIS_RS40125	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AMIS_RS40270	COG3693	PFAM glycoside hydrolase, family 10
AMIS_RS40270	COG2382	esterase
AMIS_RS40300	COG1940	carbohydrate kinase activity
AMIS_RS40300	COG1846	Transcriptional regulator
AMIS_RS40320	COG0515	serine threonine protein kinase
AMIS_RS40320	COG2815	serine threonine protein kinase
AMIS_RS40325	COG2203	Gaf domain
AMIS_RS40325	COG2199	diguanylate cyclase activity
AMIS_RS40325	COG2200	EAL domain
AMIS_RS40365	COG0322	excinuclease ABC activity
AMIS_RS40425	COG4585	Histidine kinase
AMIS_RS40470	COG2198	Histidine kinase
AMIS_RS40470	COG5002	protein histidine kinase activity
AMIS_RS40470	COG0784	Response regulator, receiver
AMIS_RS40515	COG5001	Diguanylate cyclase
AMIS_RS40545	COG3300	MHYT domain
AMIS_RS40545	COG5001	Diguanylate cyclase
AMIS_RS40560	COG2205	protein histidine kinase activity
AMIS_RS40565	COG5001	Diguanylate cyclase
AMIS_RS40565	COG4251	negative regulation of phosphorylation
AMIS_RS40565	COG2203	Gaf domain
AMIS_RS40565	COG3706	GGDEF domain
AMIS_RS40610	COG2815	serine threonine protein kinase
AMIS_RS40610	COG0515	serine threonine protein kinase
AMIS_RS40620	COG0726	polysaccharide deacetylase
AMIS_RS40655	COG3706	GGDEF domain
AMIS_RS40660	COG0443	Heat shock 70 kDa protein
AMIS_RS40675	COG3507	Belongs to the glycosyl hydrolase 43 family
AMIS_RS40705	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMIS_RS40705	COG0596	Alpha beta hydrolase
AMIS_RS40745	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AMIS_RS40755	COG4585	Histidine kinase
AMIS_RS40795	COG3447	MASE1 domain protein
AMIS_RS40795	COG5001	Diguanylate cyclase
AMIS_RS40795	COG5002	protein histidine kinase activity
AMIS_RS40810	COG1403	HNH endonuclease
AMIS_RS40820	COG5278	phosphoserine phosphatase activity
AMIS_RS40820	COG0840	transmembrane signaling receptor activity
AMIS_RS40870	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMIS_RS40935	COG0738	Major facilitator superfamily
AMIS_RS40960	COG0515	serine threonine protein kinase
AMIS_RS40980	COG0515	serine threonine protein kinase
AMIS_RS41030	COG5001	Diguanylate cyclase
AMIS_RS41035	COG2815	serine threonine protein kinase
AMIS_RS41035	COG0515	serine threonine protein kinase
AMIS_RS41090	COG0739	heme binding