locus-tag class description AMIR_RS00005 PF00308 Bacterial dnaA protein AMIR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMIR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMIR_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMIR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMIR_RS00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIR_RS00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS00020 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS00025 PF05258 Dna[CI] antecedent, DciA AMIR_RS00030 PF01751 Toprim domain AMIR_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus AMIR_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00030 PF00204 DNA gyrase B AMIR_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIR_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIR_RS00040 PF12089 Transmembrane domain of unknown function (DUF3566) AMIR_RS00055 PF07681 DoxX AMIR_RS00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS00075 PF01694 Rhomboid family AMIR_RS00085 PF06781 Cell division protein CrgA AMIR_RS00090 PF04203 Sortase domain AMIR_RS00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS00100 PF00117 Glutamine amidotransferase class-I AMIR_RS00105 PF03793 PASTA domain AMIR_RS00105 PF00069 Protein kinase domain AMIR_RS00110 PF00069 Protein kinase domain AMIR_RS00115 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS00120 PF01098 Cell cycle protein AMIR_RS00130 PF16697 Inner membrane component of T3SS, cytoplasmic domain AMIR_RS00135 PF00498 FHA domain AMIR_RS00135 PF12401 Protein of unknown function (DUF2662) AMIR_RS00155 PF01565 FAD binding domain AMIR_RS00155 PF04030 D-arabinono-1,4-lactone oxidase AMIR_RS00165 PF17925 Tetracyclin repressor-like, C-terminal domain AMIR_RS00165 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS00170 PF00232 Glycosyl hydrolase family 1 AMIR_RS00180 PF00106 short chain dehydrogenase AMIR_RS00195 PF18085 Maltokinase N-terminal cap domain AMIR_RS00195 PF01636 Phosphotransferase enzyme family AMIR_RS00225 PF02028 BCCT, betaine/carnitine/choline family transporter AMIR_RS00240 PF00106 short chain dehydrogenase AMIR_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00325 PF13492 GAF domain AMIR_RS00325 PF07694 5TMR of 5TMR-LYT AMIR_RS00325 PF06580 Histidine kinase AMIR_RS00330 PF06965 Na+/H+ antiporter 1 AMIR_RS00330 PF01343 Peptidase family S49 AMIR_RS00335 PF04397 LytTr DNA-binding domain AMIR_RS00335 PF00072 Response regulator receiver domain AMIR_RS00345 PF00474 Sodium:solute symporter family AMIR_RS00355 PF00474 Sodium:solute symporter family AMIR_RS00360 PF12728 Helix-turn-helix domain AMIR_RS00370 PF00581 Rhodanese-like domain AMIR_RS00380 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS00385 PF00067 Cytochrome P450 AMIR_RS00390 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS00395 PF01043 SecA preprotein cross-linking domain AMIR_RS00395 PF07517 SecA DEAD-like domain AMIR_RS00395 PF02810 SEC-C motif AMIR_RS00395 PF07516 SecA Wing and Scaffold domain AMIR_RS00410 PF00210 Ferritin-like domain AMIR_RS00460 PF01654 Cytochrome bd terminal oxidase subunit I AMIR_RS00465 PF02322 Cytochrome bd terminal oxidase subunit II AMIR_RS00475 PF00005 ABC transporter AMIR_RS00475 PF00664 ABC transporter transmembrane region AMIR_RS00480 PF13185 GAF domain AMIR_RS00480 PF13492 GAF domain AMIR_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00480 PF07730 Histidine kinase AMIR_RS00485 PF00072 Response regulator receiver domain AMIR_RS00485 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS00490 PF00583 Acetyltransferase (GNAT) family AMIR_RS00500 PF01842 ACT domain AMIR_RS00500 PF00800 Prephenate dehydratase AMIR_RS00545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS00550 PF01055 Glycosyl hydrolases family 31 AMIR_RS00550 PF13802 Galactose mutarotase-like AMIR_RS00560 PF05922 Peptidase inhibitor I9 AMIR_RS00560 PF00082 Subtilase family AMIR_RS00585 PF03738 Glutathionylspermidine synthase preATP-grasp AMIR_RS00590 PF03994 Domain of Unknown Function (DUF350) AMIR_RS00600 PF02403 Seryl-tRNA synthetase N-terminal domain AMIR_RS00600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS00605 PF01266 FAD dependent oxidoreductase AMIR_RS00625 PF00535 Glycosyl transferase family 2 AMIR_RS00635 PF01757 Acyltransferase family AMIR_RS00650 PF03275 UDP-galactopyranose mutase AMIR_RS00675 PF00005 ABC transporter AMIR_RS00680 PF01061 ABC-2 type transporter AMIR_RS00685 PF10759 Protein of unknown function (DUF2587) AMIR_RS00690 PF00266 Aminotransferase class-V AMIR_RS00705 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS00705 PF00107 Zinc-binding dehydrogenase AMIR_RS00705 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS00705 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS00705 PF00698 Acyl transferase domain AMIR_RS00705 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS00705 PF14765 Polyketide synthase dehydratase AMIR_RS00705 PF00550 Phosphopantetheine attachment site AMIR_RS00705 PF08659 KR domain AMIR_RS00710 PF13302 Acetyltransferase (GNAT) domain AMIR_RS00715 PF04389 Peptidase family M28 AMIR_RS00715 PF02225 PA domain AMIR_RS00720 PF04228 Putative neutral zinc metallopeptidase AMIR_RS00725 PF00746 LPXTG cell wall anchor motif AMIR_RS00725 PF02872 5'-nucleotidase, C-terminal domain AMIR_RS00725 PF00149 Calcineurin-like phosphoesterase AMIR_RS00725 PF00565 Staphylococcal nuclease homologue AMIR_RS00745 PF00155 Aminotransferase class I and II AMIR_RS00775 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS00775 PF00501 AMP-binding enzyme AMIR_RS00800 PF00768 D-alanyl-D-alanine carboxypeptidase AMIR_RS00800 PF07943 Penicillin-binding protein 5, C-terminal domain AMIR_RS00805 PF17961 Bacterial Ig domain AMIR_RS00805 PF04650 YSIRK type signal peptide AMIR_RS00805 PF17210 SdrD B-like domain AMIR_RS00810 PF16363 GDP-mannose 4,6 dehydratase AMIR_RS00830 PF00145 C-5 cytosine-specific DNA methylase AMIR_RS00845 PF00108 Thiolase, N-terminal domain AMIR_RS00845 PF02803 Thiolase, C-terminal domain AMIR_RS00860 PF02153 Prephenate dehydrogenase AMIR_RS00865 PF07687 Peptidase dimerisation domain AMIR_RS00865 PF01546 Peptidase family M20/M25/M40 AMIR_RS00875 PF14437 MafB19-like deaminase AMIR_RS00885 PF00589 Phage integrase family AMIR_RS00885 PF14659 Phage integrase, N-terminal SAM-like domain AMIR_RS00890 PF12728 Helix-turn-helix domain AMIR_RS00895 PF12307 Protein of unknown function (DUF3631) AMIR_RS00940 PF03781 Sulfatase-modifying factor enzyme 1 AMIR_RS01005 PF13426 PAS domain AMIR_RS01005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01005 PF08447 PAS fold AMIR_RS01010 PF08269 Cache domain AMIR_RS01010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01020 PF12169 DNA polymerase III subunits gamma and tau domain III AMIR_RS01025 PF02575 YbaB/EbfC DNA-binding family AMIR_RS01030 PF13662 Toprim domain AMIR_RS01030 PF02132 RecR protein AMIR_RS01055 PF00931 NB-ARC domain AMIR_RS01055 PF03704 Bacterial transcriptional activator domain AMIR_RS01055 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01070 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS01075 PF00005 ABC transporter AMIR_RS01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS01080 PF00005 ABC transporter AMIR_RS01085 PF02384 N-6 DNA Methylase AMIR_RS01095 PF00682 HMGL-like AMIR_RS01095 PF08502 LeuA allosteric (dimerisation) domain AMIR_RS01115 PF00696 Amino acid kinase family AMIR_RS01115 PF01842 ACT domain AMIR_RS01115 PF13840 ACT domain AMIR_RS01120 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS01120 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIR_RS01125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS01125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS01130 PF00313 'Cold-shock' DNA-binding domain AMIR_RS01140 PF00199 Catalase AMIR_RS01140 PF06628 Catalase-related immune-responsive AMIR_RS01145 PF02566 OsmC-like protein AMIR_RS01150 PF00210 Ferritin-like domain AMIR_RS01155 PF03358 NADPH-dependent FMN reductase AMIR_RS01160 PF07859 alpha/beta hydrolase fold AMIR_RS01165 PF00326 Prolyl oligopeptidase family AMIR_RS01170 PF08241 Methyltransferase domain AMIR_RS01200 PF00149 Calcineurin-like phosphoesterase AMIR_RS01210 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS01210 PF00912 Transglycosylase AMIR_RS01215 PF02467 Transcription factor WhiB AMIR_RS01220 PF02374 Anion-transporting ATPase AMIR_RS01225 PF02374 Anion-transporting ATPase AMIR_RS01270 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMIR_RS01270 PF00753 Metallo-beta-lactamase superfamily AMIR_RS01285 PF02768 DNA polymerase III beta subunit, C-terminal domain AMIR_RS01285 PF02767 DNA polymerase III beta subunit, central domain AMIR_RS01285 PF00712 DNA polymerase III beta subunit, N-terminal domain AMIR_RS01290 PF00083 Sugar (and other) transporter AMIR_RS01295 PF13545 Crp-like helix-turn-helix domain AMIR_RS01295 PF00027 Cyclic nucleotide-binding domain AMIR_RS01305 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS01305 PF00633 Helix-hairpin-helix motif AMIR_RS01305 PF10576 Iron-sulfur binding domain of endonuclease III AMIR_RS01310 PF00578 AhpC/TSA family AMIR_RS01315 PF00293 NUDIX domain AMIR_RS01320 PF02674 Colicin V production protein AMIR_RS01325 PF00561 alpha/beta hydrolase fold AMIR_RS01335 PF06965 Na+/H+ antiporter 1 AMIR_RS01340 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS01340 PF00501 AMP-binding enzyme AMIR_RS01340 PF16177 Acetyl-coenzyme A synthetase N-terminus AMIR_RS01355 PF00266 Aminotransferase class-V AMIR_RS01360 PF03301 Tryptophan 2,3-dioxygenase AMIR_RS01365 PF01037 Lrp/AsnC ligand binding domain AMIR_RS01370 PF01380 SIS domain AMIR_RS01375 PF01380 SIS domain AMIR_RS01375 PF01418 Helix-turn-helix domain, rpiR family AMIR_RS01380 PF00144 Beta-lactamase AMIR_RS01390 PF07075 Protein of unknown function (DUF1343) AMIR_RS01400 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS01400 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS01415 PF00437 Type II/IV secretion system protein AMIR_RS01445 PF00270 DEAD/DEAH box helicase AMIR_RS01445 PF09369 Domain of unknown function (DUF1998) AMIR_RS01445 PF00271 Helicase conserved C-terminal domain AMIR_RS01450 PF03030 Inorganic H+ pyrophosphatase AMIR_RS01480 PF13368 Topoisomerase C-terminal repeat AMIR_RS01480 PF01131 DNA topoisomerase AMIR_RS01480 PF01751 Toprim domain AMIR_RS01490 PF02223 Thymidylate kinase AMIR_RS01495 PF12169 DNA polymerase III subunits gamma and tau domain III AMIR_RS01510 PF01032 FecCD transport family AMIR_RS01515 PF01497 Periplasmic binding protein AMIR_RS01520 PF00005 ABC transporter AMIR_RS01525 PF00296 Luciferase-like monooxygenase AMIR_RS01555 PF07690 Major Facilitator Superfamily AMIR_RS01560 PF00719 Inorganic pyrophosphatase AMIR_RS01570 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AMIR_RS01580 PF01171 PP-loop family AMIR_RS01580 PF09179 TilS substrate binding domain AMIR_RS01585 PF00156 Phosphoribosyl transferase domain AMIR_RS01595 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS01595 PF01434 Peptidase family M41 AMIR_RS01595 PF17862 AAA+ lid domain AMIR_RS01600 PF01227 GTP cyclohydrolase I AMIR_RS01605 PF00809 Pterin binding enzyme AMIR_RS01610 PF02152 Dihydroneopterin aldolase AMIR_RS01615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMIR_RS01630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIR_RS01655 PF02569 Pantoate-beta-alanine ligase AMIR_RS01660 PF02261 Aspartate decarboxylase AMIR_RS01665 PF03309 Type III pantothenate kinase AMIR_RS01670 PF08241 Methyltransferase domain AMIR_RS01675 PF01336 OB-fold nucleic acid binding domain AMIR_RS01675 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS01680 PF11774 Lsr2 AMIR_RS01685 PF01032 FecCD transport family AMIR_RS01690 PF01032 FecCD transport family AMIR_RS01695 PF00005 ABC transporter AMIR_RS01705 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS01705 PF02861 Clp amino terminal domain, pathogenicity island component AMIR_RS01705 PF17871 AAA lid domain AMIR_RS01705 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS01705 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS01710 PF01470 Pyroglutamyl peptidase AMIR_RS01720 PF02146 Sir2 family AMIR_RS01725 PF03992 Antibiotic biosynthesis monooxygenase AMIR_RS01730 PF11838 ERAP1-like C-terminal domain AMIR_RS01730 PF01433 Peptidase family M1 domain AMIR_RS01745 PF00633 Helix-hairpin-helix motif AMIR_RS01745 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS01745 PF10576 Iron-sulfur binding domain of endonuclease III AMIR_RS01750 PF00484 Carbonic anhydrase AMIR_RS01760 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS01765 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS01770 PF01547 Bacterial extracellular solute-binding protein AMIR_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01785 PF00005 ABC transporter AMIR_RS01785 PF17912 MalK OB fold domain AMIR_RS01795 PF00005 ABC transporter AMIR_RS01800 PF00950 ABC 3 transport family AMIR_RS01805 PF00072 Response regulator receiver domain AMIR_RS01805 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS01820 PF03062 MBOAT, membrane-bound O-acyltransferase family AMIR_RS01825 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS01825 PF00588 SpoU rRNA Methylase family AMIR_RS01830 PF09190 DALR domain AMIR_RS01830 PF01406 tRNA synthetases class I (C) catalytic domain AMIR_RS01835 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS01840 PF02542 YgbB family AMIR_RS01845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMIR_RS01850 PF02559 CarD-like/TRCF domain AMIR_RS01860 PF18073 Rubredoxin metal binding domain AMIR_RS01870 PF00106 short chain dehydrogenase AMIR_RS01880 PF00982 Glycosyltransferase family 20 AMIR_RS01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01900 PF00672 HAMP domain AMIR_RS01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01915 PF00672 HAMP domain AMIR_RS01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS01915 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS01920 PF00072 Response regulator receiver domain AMIR_RS01920 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01925 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS01925 PF00175 Oxidoreductase NAD-binding domain AMIR_RS01945 PF03747 ADP-ribosylglycohydrolase AMIR_RS01950 PF00931 NB-ARC domain AMIR_RS01950 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01950 PF03704 Bacterial transcriptional activator domain AMIR_RS01970 PF00296 Luciferase-like monooxygenase AMIR_RS01975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS01975 PF03466 LysR substrate binding domain AMIR_RS01985 PF00082 Subtilase family AMIR_RS01985 PF02225 PA domain AMIR_RS01985 PF05922 Peptidase inhibitor I9 AMIR_RS01985 PF13860 FlgD Ig-like domain AMIR_RS01990 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIR_RS01995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS01995 PF13378 Enolase C-terminal domain-like AMIR_RS02005 PF00248 Aldo/keto reductase family AMIR_RS02020 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02020 PF07729 FCD domain AMIR_RS02025 PF01380 SIS domain AMIR_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02035 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02040 PF01547 Bacterial extracellular solute-binding protein AMIR_RS02045 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02045 PF07702 UTRA domain AMIR_RS02050 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS02055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIR_RS02060 PF02581 Thiamine monophosphate synthase AMIR_RS02065 PF05690 Thiazole biosynthesis protein ThiG AMIR_RS02065 PF01266 FAD dependent oxidoreductase AMIR_RS02075 PF05690 Thiazole biosynthesis protein ThiG AMIR_RS02080 PF01047 MarR family AMIR_RS02085 PF04072 Leucine carboxyl methyltransferase AMIR_RS02130 PF00107 Zinc-binding dehydrogenase AMIR_RS02130 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS02140 PF08543 Phosphomethylpyrimidine kinase AMIR_RS02145 PF01964 Radical SAM ThiC family AMIR_RS02145 PF13667 ThiC-associated domain AMIR_RS02155 PF01327 Polypeptide deformylase AMIR_RS02170 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02170 PF07729 FCD domain AMIR_RS02175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS02180 PF01434 Peptidase family M41 AMIR_RS02180 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS02180 PF17862 AAA+ lid domain AMIR_RS02195 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS02200 PF02666 Phosphatidylserine decarboxylase AMIR_RS02210 PF03453 MoeA N-terminal region (domain I and II) AMIR_RS02210 PF00994 Probable molybdopterin binding domain AMIR_RS02210 PF03454 MoeA C-terminal region (domain IV) AMIR_RS02220 PF00313 'Cold-shock' DNA-binding domain AMIR_RS02225 PF14032 PknH-like extracellular domain AMIR_RS02225 PF00069 Protein kinase domain AMIR_RS02230 PF00118 TCP-1/cpn60 chaperonin family AMIR_RS02245 PF03932 CutC family AMIR_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02265 PF07691 PA14 domain AMIR_RS02265 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIR_RS02265 PF02838 Glycosyl hydrolase family 20, domain 2 AMIR_RS02280 PF18374 Enolase N-terminal domain-like AMIR_RS02280 PF13378 Enolase C-terminal domain-like AMIR_RS02315 PF03259 Roadblock/LC7 domain AMIR_RS02345 PF00390 Malic enzyme, N-terminal domain AMIR_RS02345 PF03949 Malic enzyme, NAD binding domain AMIR_RS02350 PF01967 MoaC family AMIR_RS02355 PF01967 MoaC family AMIR_RS02355 PF00994 Probable molybdopterin binding domain AMIR_RS02360 PF02391 MoaE protein AMIR_RS02365 PF06737 Transglycosylase-like domain AMIR_RS02375 PF06463 Molybdenum Cofactor Synthesis C AMIR_RS02375 PF04055 Radical SAM superfamily AMIR_RS02380 PF01047 MarR family AMIR_RS02385 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS02400 PF03733 Inner membrane component domain AMIR_RS02405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS02405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS02415 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS02425 PF00313 'Cold-shock' DNA-binding domain AMIR_RS02435 PF07690 Major Facilitator Superfamily AMIR_RS02445 PF11228 Protein of unknown function (DUF3027) AMIR_RS02460 PF00860 Permease family AMIR_RS02465 PF01047 MarR family AMIR_RS02470 PF05977 Transmembrane secretion effector AMIR_RS02480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMIR_RS02480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMIR_RS02485 PF00005 ABC transporter AMIR_RS02500 PF00588 SpoU rRNA Methylase family AMIR_RS02505 PF10801 Protein of unknown function (DUF2537) AMIR_RS02510 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMIR_RS02510 PF00326 Prolyl oligopeptidase family AMIR_RS02520 PF02278 Polysaccharide lyase family 8, super-sandwich domain AMIR_RS02520 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AMIR_RS02520 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AMIR_RS02525 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS02525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMIR_RS02530 PF01774 UreD urease accessory protein AMIR_RS02540 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS02545 PF01730 UreF AMIR_RS02550 PF01979 Amidohydrolase family AMIR_RS02550 PF00449 Urease alpha-subunit, N-terminal domain AMIR_RS02555 PF00699 Urease beta subunit AMIR_RS02560 PF00547 Urease, gamma subunit AMIR_RS02565 PF00285 Citrate synthase, C-terminal domain AMIR_RS02570 PF13732 Domain of unknown function (DUF4162) AMIR_RS02570 PF00005 ABC transporter AMIR_RS02585 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02585 PF00072 Response regulator receiver domain AMIR_RS02590 PF00266 Aminotransferase class-V AMIR_RS02595 PF11268 Protein of unknown function (DUF3071) AMIR_RS02615 PF00005 ABC transporter AMIR_RS02615 PF00664 ABC transporter transmembrane region AMIR_RS02620 PF00664 ABC transporter transmembrane region AMIR_RS02620 PF00005 ABC transporter AMIR_RS02630 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02630 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS02635 PF13520 Amino acid permease AMIR_RS02640 PF01263 Aldose 1-epimerase AMIR_RS02645 PF01979 Amidohydrolase family AMIR_RS02650 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS02660 PF00294 pfkB family carbohydrate kinase AMIR_RS02665 PF00285 Citrate synthase, C-terminal domain AMIR_RS02670 PF00875 DNA photolyase AMIR_RS02670 PF03441 FAD binding domain of DNA photolyase AMIR_RS02675 PF00072 Response regulator receiver domain AMIR_RS02675 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02690 PF13732 Domain of unknown function (DUF4162) AMIR_RS02690 PF00005 ABC transporter AMIR_RS02715 PF07969 Amidohydrolase family AMIR_RS02720 PF16884 N-terminal domain of oxidoreductase AMIR_RS02720 PF00107 Zinc-binding dehydrogenase AMIR_RS02735 PF01580 FtsK/SpoIIIE family AMIR_RS02760 PF12146 Serine aminopeptidase, S33 AMIR_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS02765 PF03466 LysR substrate binding domain AMIR_RS02770 PF02567 Phenazine biosynthesis-like protein AMIR_RS02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS02775 PF03466 LysR substrate binding domain AMIR_RS02780 PF05368 NmrA-like family AMIR_RS02785 PF01638 HxlR-like helix-turn-helix AMIR_RS02800 PF00350 Dynamin family AMIR_RS02805 PF00350 Dynamin family AMIR_RS02820 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02820 PF00072 Response regulator receiver domain AMIR_RS02830 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AMIR_RS02830 PF00400 WD domain, G-beta repeat AMIR_RS02835 PF12833 Helix-turn-helix domain AMIR_RS02835 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS02835 PF06029 AlkA N-terminal domain AMIR_RS02835 PF02805 Metal binding domain of Ada AMIR_RS02865 PF04650 YSIRK type signal peptide AMIR_RS02865 PF17961 Bacterial Ig domain AMIR_RS02865 PF00746 LPXTG cell wall anchor motif AMIR_RS02865 PF17210 SdrD B-like domain AMIR_RS02875 PF05593 RHS Repeat AMIR_RS02875 PF03527 RHS protein AMIR_RS02890 PF00293 NUDIX domain AMIR_RS02890 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS02895 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS02895 PF00931 NB-ARC domain AMIR_RS02895 PF03704 Bacterial transcriptional activator domain AMIR_RS02975 PF00266 Aminotransferase class-V AMIR_RS02980 PF04851 Type III restriction enzyme, res subunit AMIR_RS02980 PF00271 Helicase conserved C-terminal domain AMIR_RS02985 PF08676 MutL C terminal dimerisation domain AMIR_RS02985 PF01119 DNA mismatch repair protein, C-terminal domain AMIR_RS03015 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS03015 PF00072 Response regulator receiver domain AMIR_RS03020 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS03025 PF00881 Nitroreductase family AMIR_RS03030 PF01084 Ribosomal protein S18 AMIR_RS03035 PF00253 Ribosomal protein S14p/S29e AMIR_RS03040 PF00471 Ribosomal protein L33 AMIR_RS03045 PF00830 Ribosomal L28 family AMIR_RS03050 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS03060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS03060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS03070 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS03070 PF00072 Response regulator receiver domain AMIR_RS03075 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS03075 PF00672 HAMP domain AMIR_RS03080 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03085 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03090 PF01547 Bacterial extracellular solute-binding protein AMIR_RS03095 PF08532 Beta-galactosidase trimerisation domain AMIR_RS03095 PF02449 Beta-galactosidase AMIR_RS03095 PF08533 Beta-galactosidase C-terminal domain AMIR_RS03100 PF00455 DeoR C terminal sensor domain AMIR_RS03100 PF08220 DeoR-like helix-turn-helix domain AMIR_RS03105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMIR_RS03105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMIR_RS03110 PF13180 PDZ domain AMIR_RS03120 PF00994 Probable molybdopterin binding domain AMIR_RS03120 PF01967 MoaC family AMIR_RS03125 PF01741 Large-conductance mechanosensitive channel, MscL AMIR_RS03140 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMIR_RS03145 PF00483 Nucleotidyl transferase AMIR_RS03150 PF03454 MoeA C-terminal region (domain IV) AMIR_RS03150 PF00994 Probable molybdopterin binding domain AMIR_RS03150 PF03453 MoeA N-terminal region (domain I and II) AMIR_RS03155 PF13302 Acetyltransferase (GNAT) domain AMIR_RS03180 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS03180 PF13361 UvrD-like helicase C-terminal domain AMIR_RS03185 PF03793 PASTA domain AMIR_RS03185 PF00069 Protein kinase domain AMIR_RS03190 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMIR_RS03190 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AMIR_RS03195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS03220 PF08264 Anticodon-binding domain of tRNA AMIR_RS03220 PF09334 tRNA synthetases class I (M) AMIR_RS03225 PF01026 TatD related DNase AMIR_RS03230 PF03990 G5-linked-Ubiquitin-like domain AMIR_RS03230 PF07501 G5 domain AMIR_RS03230 PF06737 Transglycosylase-like domain AMIR_RS03235 PF00398 Ribosomal RNA adenine dimethylase AMIR_RS03240 PF00005 ABC transporter AMIR_RS03240 PF09383 NIL domain AMIR_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03250 PF03180 NLPA lipoprotein AMIR_RS03255 PF00288 GHMP kinases N terminal domain AMIR_RS03255 PF08544 GHMP kinases C terminal AMIR_RS03260 PF16326 ABC transporter C-terminal domain AMIR_RS03260 PF12848 ABC transporter AMIR_RS03260 PF00005 ABC transporter AMIR_RS03265 PF05103 DivIVA protein AMIR_RS03280 PF14535 AMP-binding enzyme C-terminal domain AMIR_RS03280 PF00501 AMP-binding enzyme AMIR_RS03285 PF01195 Peptidyl-tRNA hydrolase AMIR_RS03295 PF01386 Ribosomal L25p family AMIR_RS03295 PF14693 Ribosomal protein TL5, C-terminal domain AMIR_RS03300 PF14572 Phosphoribosyl synthetase-associated domain AMIR_RS03300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIR_RS03305 PF12804 MobA-like NTP transferase domain AMIR_RS03305 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS03310 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS03330 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS03340 PF07995 Glucose / Sorbosone dehydrogenase AMIR_RS03350 PF03461 TRCF domain AMIR_RS03350 PF00270 DEAD/DEAH box helicase AMIR_RS03350 PF02559 CarD-like/TRCF domain AMIR_RS03350 PF17757 UvrB interaction domain AMIR_RS03350 PF00271 Helicase conserved C-terminal domain AMIR_RS03360 PF03819 MazG nucleotide pyrophosphohydrolase domain AMIR_RS03365 PF07676 WD40-like Beta Propeller Repeat AMIR_RS03365 PF03572 Peptidase family S41 AMIR_RS03365 PF14684 Tricorn protease C1 domain AMIR_RS03365 PF14685 Tricorn protease PDZ domain AMIR_RS03380 PF00113 Enolase, C-terminal TIM barrel domain AMIR_RS03380 PF03952 Enolase, N-terminal domain AMIR_RS03400 PF02541 Ppx/GppA phosphatase family AMIR_RS03405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03415 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS03415 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03420 PF00005 ABC transporter AMIR_RS03425 PF00005 ABC transporter AMIR_RS03425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03435 PF03167 Uracil DNA glycosylase superfamily AMIR_RS03450 PF17863 AAA lid domain AMIR_RS03450 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS03520 PF02803 Thiolase, C-terminal domain AMIR_RS03520 PF00108 Thiolase, N-terminal domain AMIR_RS03525 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS03525 PF00571 CBS domain AMIR_RS03535 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS03550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS03560 PF01272 Transcription elongation factor, GreA/GreB, C-term AMIR_RS03560 PF03449 Transcription elongation factor, N-terminal AMIR_RS03570 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS03585 PF03190 Protein of unknown function, DUF255 AMIR_RS03590 PF03006 Haemolysin-III related AMIR_RS03595 PF01255 Putative undecaprenyl diphosphate synthase AMIR_RS03610 PF02562 PhoH-like protein AMIR_RS03610 PF13638 PIN domain AMIR_RS03615 PF00571 CBS domain AMIR_RS03615 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS03620 PF01068 ATP dependent DNA ligase domain AMIR_RS03620 PF04679 ATP dependent DNA ligase C terminal region AMIR_RS03620 PF04675 DNA ligase N terminus AMIR_RS03625 PF10415 Fumarase C C-terminus AMIR_RS03625 PF00206 Lyase AMIR_RS03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS03645 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMIR_RS03650 PF02609 Exonuclease VII small subunit AMIR_RS03660 PF02601 Exonuclease VII, large subunit AMIR_RS03660 PF13742 OB-fold nucleic acid binding domain AMIR_RS03670 PF02401 LytB protein AMIR_RS03685 PF00149 Calcineurin-like phosphoesterase AMIR_RS03685 PF12320 Type 5 capsule protein repressor C-terminal domain AMIR_RS03690 PF13476 AAA domain AMIR_RS03700 PF12833 Helix-turn-helix domain AMIR_RS03700 PF02805 Metal binding domain of Ada AMIR_RS03700 PF06029 AlkA N-terminal domain AMIR_RS03700 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS03705 PF01926 50S ribosome-binding GTPase AMIR_RS03705 PF06071 Protein of unknown function (DUF933) AMIR_RS03735 PF09594 Glycosyltransferase family 87 AMIR_RS03745 PF01329 Pterin 4 alpha carbinolamine dehydratase AMIR_RS03755 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03760 PF08402 TOBE domain AMIR_RS03760 PF00005 ABC transporter AMIR_RS03775 PF00005 ABC transporter AMIR_RS03785 PF00072 Response regulator receiver domain AMIR_RS03785 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS03790 PF00672 HAMP domain AMIR_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS03790 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS03795 PF00293 NUDIX domain AMIR_RS03800 PF00579 tRNA synthetases class I (W and Y) AMIR_RS03810 PF00679 Elongation factor G C-terminus AMIR_RS03810 PF14492 Elongation Factor G, domain II AMIR_RS03810 PF00009 Elongation factor Tu GTP binding domain AMIR_RS03810 PF03144 Elongation factor Tu domain 2 AMIR_RS03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03830 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS03835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03835 PF00005 ABC transporter AMIR_RS03840 PF00005 ABC transporter AMIR_RS03840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03845 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS03865 PF00037 4Fe-4S binding domain AMIR_RS03870 PF00155 Aminotransferase class I and II AMIR_RS03875 PF14602 Hexapeptide repeat of succinyl-transferase AMIR_RS03875 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMIR_RS03880 PF01546 Peptidase family M20/M25/M40 AMIR_RS03880 PF07687 Peptidase dimerisation domain AMIR_RS03885 PF03641 Possible lysine decarboxylase AMIR_RS03890 PF03641 Possible lysine decarboxylase AMIR_RS03900 PF00809 Pterin binding enzyme AMIR_RS03920 PF00958 GMP synthase C terminal domain AMIR_RS03920 PF00117 Glutamine amidotransferase class-I AMIR_RS03920 PF03352 Methyladenine glycosylase AMIR_RS03920 PF13302 Acetyltransferase (GNAT) domain AMIR_RS03920 PF13673 Acetyltransferase (GNAT) domain AMIR_RS03930 PF08659 KR domain AMIR_RS03930 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS03930 PF08990 Erythronolide synthase docking AMIR_RS03930 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS03930 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS03930 PF14765 Polyketide synthase dehydratase AMIR_RS03930 PF00550 Phosphopantetheine attachment site AMIR_RS03930 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS03930 PF09277 Erythronolide synthase, docking AMIR_RS03930 PF00698 Acyl transferase domain AMIR_RS03945 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS03950 PF07848 PaaX-like protein AMIR_RS03950 PF08223 PaaX-like protein C-terminal domain AMIR_RS03955 PF02789 Cytosol aminopeptidase family, N-terminal domain AMIR_RS03955 PF00883 Cytosol aminopeptidase family, catalytic domain AMIR_RS03965 PF07690 Major Facilitator Superfamily AMIR_RS03980 PF00534 Glycosyl transferases group 1 AMIR_RS03980 PF13439 Glycosyltransferase Family 4 AMIR_RS03985 PF00483 Nucleotidyl transferase AMIR_RS03990 PF04542 Sigma-70 region 2 AMIR_RS03990 PF08281 Sigma-70, region 4 AMIR_RS04000 PF13180 PDZ domain AMIR_RS04005 PF02416 mttA/Hcf106 family AMIR_RS04010 PF01883 Iron-sulfur cluster assembly protein AMIR_RS04010 PF10609 NUBPL iron-transfer P-loop NTPase AMIR_RS04025 PF00571 CBS domain AMIR_RS04025 PF01769 Divalent cation transporter AMIR_RS04025 PF03448 MgtE intracellular N domain AMIR_RS04030 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMIR_RS04040 PF03328 HpcH/HpaI aldolase/citrate lyase family AMIR_RS04050 PF01547 Bacterial extracellular solute-binding protein AMIR_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04065 PF00005 ABC transporter AMIR_RS04065 PF17912 MalK OB fold domain AMIR_RS04090 PF01544 CorA-like Mg2+ transporter protein AMIR_RS04125 PF00270 DEAD/DEAH box helicase AMIR_RS04125 PF00271 Helicase conserved C-terminal domain AMIR_RS04160 PF12697 Alpha/beta hydrolase family AMIR_RS04170 PF00581 Rhodanese-like domain AMIR_RS04170 PF00899 ThiF family AMIR_RS04180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIR_RS04180 PF00384 Molybdopterin oxidoreductase AMIR_RS04180 PF01568 Molydopterin dinucleotide binding domain AMIR_RS04185 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS04185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS04185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS04185 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMIR_RS04190 PF07690 Major Facilitator Superfamily AMIR_RS04195 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS04195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS04195 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMIR_RS04195 PF13806 Rieske-like [2Fe-2S] domain AMIR_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS04195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS04200 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS04200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS04200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS04200 PF13806 Rieske-like [2Fe-2S] domain AMIR_RS04200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS04200 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMIR_RS04225 PF00072 Response regulator receiver domain AMIR_RS04225 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS04230 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS04230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS04230 PF00672 HAMP domain AMIR_RS04260 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04260 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04265 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04265 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04285 PF03466 LysR substrate binding domain AMIR_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS04290 PF04228 Putative neutral zinc metallopeptidase AMIR_RS04295 PF04228 Putative neutral zinc metallopeptidase AMIR_RS04305 PF00216 Bacterial DNA-binding protein AMIR_RS04315 PF00561 alpha/beta hydrolase fold AMIR_RS04325 PF05193 Peptidase M16 inactive domain AMIR_RS04325 PF00675 Insulinase (Peptidase family M16) AMIR_RS04330 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMIR_RS04330 PF09297 NADH pyrophosphatase zinc ribbon domain AMIR_RS04330 PF00293 NUDIX domain AMIR_RS04335 PF00480 ROK family AMIR_RS04340 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS04340 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS04345 PF01979 Amidohydrolase family AMIR_RS04365 PF03186 CobD/Cbib protein AMIR_RS04370 PF02104 SURF1 family AMIR_RS04380 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIR_RS04390 PF00155 Aminotransferase class I and II AMIR_RS04395 PF01784 NIF3 (NGG1p interacting factor 3) AMIR_RS04405 PF13456 Reverse transcriptase-like AMIR_RS04405 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS04410 PF03358 NADPH-dependent FMN reductase AMIR_RS04445 PF00877 NlpC/P60 family AMIR_RS04465 PF01497 Periplasmic binding protein AMIR_RS04470 PF00561 alpha/beta hydrolase fold AMIR_RS04495 PF00005 ABC transporter AMIR_RS04495 PF08402 TOBE domain AMIR_RS04520 PF02548 Ketopantoate hydroxymethyltransferase AMIR_RS04530 PF09924 Uncharacterised conserved protein (DUF2156) AMIR_RS04530 PF16995 Transmembrane region of lysyl-tRNA synthetase AMIR_RS04530 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS04530 PF01336 OB-fold nucleic acid binding domain AMIR_RS04535 PF00561 alpha/beta hydrolase fold AMIR_RS04540 PF02540 NAD synthase AMIR_RS04540 PF00795 Carbon-nitrogen hydrolase AMIR_RS04545 PF03951 Glutamine synthetase, beta-Grasp domain AMIR_RS04545 PF00120 Glutamine synthetase, catalytic domain AMIR_RS04565 PF01384 Phosphate transporter family AMIR_RS04575 PF08335 GlnD PII-uridylyltransferase AMIR_RS04575 PF03710 Glutamate-ammonia ligase adenylyltransferase AMIR_RS04595 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS04595 PF07702 UTRA domain AMIR_RS04635 PF00120 Glutamine synthetase, catalytic domain AMIR_RS04635 PF03951 Glutamine synthetase, beta-Grasp domain AMIR_RS04645 PF13829 Domain of unknown function (DUF4191) AMIR_RS04650 PF00570 HRDC domain AMIR_RS04650 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04650 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04655 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04655 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04655 PF00570 HRDC domain AMIR_RS04660 PF02467 Transcription factor WhiB AMIR_RS04660 PF02178 AT hook motif AMIR_RS04685 PF03109 ABC1 family AMIR_RS04715 PF03699 Uncharacterised protein family (UPF0182) AMIR_RS04745 PF03462 PCRF domain AMIR_RS04745 PF00472 RF-1 domain AMIR_RS04750 PF00005 ABC transporter AMIR_RS04755 PF02687 FtsX-like permease family AMIR_RS04755 PF18075 FtsX extracellular domain AMIR_RS04760 PF01668 SmpB protein AMIR_RS04765 PF00072 Response regulator receiver domain AMIR_RS04765 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS04770 PF00672 HAMP domain AMIR_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS04770 PF07730 Histidine kinase AMIR_RS04780 PF00270 DEAD/DEAH box helicase AMIR_RS04780 PF00271 Helicase conserved C-terminal domain AMIR_RS04780 PF08482 ATP-dependent helicase C-terminal AMIR_RS04780 PF04408 Helicase associated domain (HA2) AMIR_RS04785 PF00535 Glycosyl transferase family 2 AMIR_RS04790 PF00583 Acetyltransferase (GNAT) family AMIR_RS04795 PF07690 Major Facilitator Superfamily AMIR_RS04805 PF00501 AMP-binding enzyme AMIR_RS04805 PF14535 AMP-binding enzyme C-terminal domain AMIR_RS04815 PF00069 Protein kinase domain AMIR_RS04815 PF03793 PASTA domain AMIR_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04895 PF05336 L-rhamnose mutarotase AMIR_RS04900 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS04930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS04930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS04930 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS04935 PF01008 Initiation factor 2 subunit family AMIR_RS04945 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS04950 PF03079 ARD/ARD' family AMIR_RS04960 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS04985 PF13091 PLD-like domain AMIR_RS04990 PF13307 Helicase C-terminal domain AMIR_RS05020 PF02350 UDP-N-acetylglucosamine 2-epimerase AMIR_RS05030 PF00857 Isochorismatase family AMIR_RS05035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIR_RS05035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMIR_RS05040 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMIR_RS05045 PF09438 Domain of unknown function (DUF2017) AMIR_RS05060 PF14464 Prokaryotic homologs of the JAB domain AMIR_RS05065 PF02597 ThiS family AMIR_RS05070 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS05075 PF12706 Beta-lactamase superfamily domain AMIR_RS05080 PF08450 SMP-30/Gluconolactonase/LRE-like region AMIR_RS05085 PF01694 Rhomboid family AMIR_RS05090 PF01177 Asp/Glu/Hydantoin racemase AMIR_RS05095 PF12706 Beta-lactamase superfamily domain AMIR_RS05115 PF01138 3' exoribonuclease family, domain 1 AMIR_RS05115 PF03725 3' exoribonuclease family, domain 2 AMIR_RS05120 PF01725 Ham1 family AMIR_RS05130 PF00578 AhpC/TSA family AMIR_RS05140 PF00296 Luciferase-like monooxygenase AMIR_RS05150 PF09335 SNARE associated Golgi protein AMIR_RS05155 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS05155 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS05170 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS05170 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS05175 PF01476 LysM domain AMIR_RS05175 PF00756 Putative esterase AMIR_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS05180 PF00107 Zinc-binding dehydrogenase AMIR_RS05180 PF13823 Alcohol dehydrogenase GroES-associated AMIR_RS05185 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS05190 PF08245 Mur ligase middle domain AMIR_RS05190 PF08353 Domain of unknown function (DUF1727) AMIR_RS05200 PF02698 DUF218 domain AMIR_RS05205 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS05205 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS05210 PF02091 Glycyl-tRNA synthetase alpha subunit AMIR_RS05210 PF02092 Glycyl-tRNA synthetase beta subunit AMIR_RS05215 PF05922 Peptidase inhibitor I9 AMIR_RS05215 PF00082 Subtilase family AMIR_RS05220 PF13407 Periplasmic binding protein domain AMIR_RS05230 PF00313 'Cold-shock' DNA-binding domain AMIR_RS05240 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIR_RS05240 PF16499 Alpha galactosidase A AMIR_RS05250 PF04434 SWIM zinc finger AMIR_RS05255 PF00176 SNF2 family N-terminal domain AMIR_RS05255 PF00271 Helicase conserved C-terminal domain AMIR_RS05255 PF12419 SNF2 Helicase protein AMIR_RS05270 PF00145 C-5 cytosine-specific DNA methylase AMIR_RS05275 PF03852 DNA mismatch endonuclease Vsr AMIR_RS05295 PF03734 L,D-transpeptidase catalytic domain AMIR_RS05295 PF17964 Bacterial Ig domain AMIR_RS05300 PF00005 ABC transporter AMIR_RS05300 PF12848 ABC transporter AMIR_RS05300 PF16326 ABC transporter C-terminal domain AMIR_RS05310 PF00929 Exonuclease AMIR_RS05320 PF01965 DJ-1/PfpI family AMIR_RS05330 PF00294 pfkB family carbohydrate kinase AMIR_RS05340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMIR_RS05355 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS05355 PF00501 AMP-binding enzyme AMIR_RS05365 PF01047 MarR family AMIR_RS05370 PF02525 Flavodoxin-like fold AMIR_RS05385 PF02355 Protein export membrane protein AMIR_RS05385 PF07549 SecD/SecF GG Motif AMIR_RS05390 PF01070 FMN-dependent dehydrogenase AMIR_RS05400 PF12833 Helix-turn-helix domain AMIR_RS05405 PF03422 Carbohydrate binding module (family 6) AMIR_RS05405 PF00457 Glycosyl hydrolases family 11 AMIR_RS05420 PF13649 Methyltransferase domain AMIR_RS05425 PF01619 Proline dehydrogenase AMIR_RS05430 PF00171 Aldehyde dehydrogenase family AMIR_RS05435 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS05435 PF17853 GGDEF-like domain AMIR_RS05440 PF14849 YidC periplasmic domain AMIR_RS05440 PF02096 60Kd inner membrane protein AMIR_RS05465 PF00171 Aldehyde dehydrogenase family AMIR_RS05475 PF02838 Glycosyl hydrolase family 20, domain 2 AMIR_RS05475 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIR_RS05480 PF01928 CYTH domain AMIR_RS05480 PF05235 CHAD domain AMIR_RS05495 PF02911 Formyl transferase, C-terminal domain AMIR_RS05495 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS05495 PF00551 Formyl transferase AMIR_RS05500 PF07969 Amidohydrolase family AMIR_RS05515 PF00574 Clp protease AMIR_RS05520 PF00574 Clp protease AMIR_RS05610 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS05615 PF07690 Major Facilitator Superfamily AMIR_RS05630 PF05425 Copper resistance protein D AMIR_RS05630 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AMIR_RS05640 PF13732 Domain of unknown function (DUF4162) AMIR_RS05640 PF00005 ABC transporter AMIR_RS05655 PF00005 ABC transporter AMIR_RS05655 PF12848 ABC transporter AMIR_RS05665 PF05088 Bacterial NAD-glutamate dehydrogenase AMIR_RS05670 PF00128 Alpha amylase, catalytic domain AMIR_RS05670 PF00686 Starch binding domain AMIR_RS05670 PF02806 Alpha amylase, C-terminal all-beta domain AMIR_RS05675 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS05690 PF00128 Alpha amylase, catalytic domain AMIR_RS05695 PF01152 Bacterial-like globin AMIR_RS05700 PF00924 Mechanosensitive ion channel AMIR_RS05705 PF00326 Prolyl oligopeptidase family AMIR_RS05705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMIR_RS05725 PF17174 Domain of unknown function (DUF5130) AMIR_RS05730 PF11838 ERAP1-like C-terminal domain AMIR_RS05730 PF01433 Peptidase family M1 domain AMIR_RS05735 PF01323 DSBA-like thioredoxin domain AMIR_RS05745 PF02502 Ribose/Galactose Isomerase AMIR_RS05755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS05755 PF06827 Zinc finger found in FPG and IleRS AMIR_RS05755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS05765 PF13530 Sterol carrier protein domain AMIR_RS05765 PF17668 Acetyltransferase (GNAT) domain AMIR_RS05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS05785 PF03466 LysR substrate binding domain AMIR_RS05790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS05790 PF05697 Bacterial trigger factor protein (TF) AMIR_RS05790 PF05698 Bacterial trigger factor protein (TF) C-terminus AMIR_RS05795 PF00574 Clp protease AMIR_RS05800 PF06689 ClpX C4-type zinc finger AMIR_RS05800 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS05800 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS05815 PF02634 FdhD/NarQ family AMIR_RS05835 PF01568 Molydopterin dinucleotide binding domain AMIR_RS05835 PF00384 Molybdopterin oxidoreductase AMIR_RS05850 PF00133 tRNA synthetases class I (I, L, M and V) AMIR_RS05850 PF08264 Anticodon-binding domain of tRNA AMIR_RS05850 PF10458 Valyl tRNA synthetase tRNA binding arm AMIR_RS05855 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS05855 PF08245 Mur ligase middle domain AMIR_RS05870 PF03714 Bacterial pullanase-associated domain AMIR_RS05870 PF02806 Alpha amylase, C-terminal all-beta domain AMIR_RS05870 PF00128 Alpha amylase, catalytic domain AMIR_RS05880 PF00334 Nucleoside diphosphate kinase AMIR_RS05885 PF00005 ABC transporter AMIR_RS05895 PF01061 ABC-2 type transporter AMIR_RS05905 PF04545 Sigma-70, region 4 AMIR_RS05905 PF04542 Sigma-70 region 2 AMIR_RS05910 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS05910 PF00072 Response regulator receiver domain AMIR_RS05915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIR_RS05915 PF10531 SLBB domain AMIR_RS05915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIR_RS05930 PF00082 Subtilase family AMIR_RS05940 PF10150 Ribonuclease E/G family AMIR_RS05940 PF10150 Ribonuclease E/G family AMIR_RS05945 PF00829 Ribosomal prokaryotic L21 protein AMIR_RS05950 PF01016 Ribosomal L27 protein AMIR_RS05955 PF01018 GTP1/OBG AMIR_RS05955 PF09269 Domain of unknown function (DUF1967) AMIR_RS05955 PF01926 50S ribosome-binding GTPase AMIR_RS05960 PF01472 PUA domain AMIR_RS05960 PF00696 Amino acid kinase family AMIR_RS05965 PF00083 Sugar (and other) transporter AMIR_RS05970 PF13302 Acetyltransferase (GNAT) domain AMIR_RS05975 PF16124 RecQ zinc-binding AMIR_RS05975 PF09382 RQC domain AMIR_RS05975 PF00271 Helicase conserved C-terminal domain AMIR_RS05975 PF00570 HRDC domain AMIR_RS05975 PF00270 DEAD/DEAH box helicase AMIR_RS05980 PF00171 Aldehyde dehydrogenase family AMIR_RS05985 PF00067 Cytochrome P450 AMIR_RS05995 PF01467 Cytidylyltransferase-like AMIR_RS06005 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS06010 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS06015 PF02645 Uncharacterised protein, DegV family COG1307 AMIR_RS06020 PF10531 SLBB domain AMIR_RS06025 PF00753 Metallo-beta-lactamase superfamily AMIR_RS06025 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMIR_RS06035 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS06050 PF01649 Ribosomal protein S20 AMIR_RS06055 PF01925 Sulfite exporter TauE/SafE AMIR_RS06080 PF04174 A circularly permuted ATPgrasp AMIR_RS06090 PF08379 Bacterial transglutaminase-like N-terminal region AMIR_RS06090 PF01841 Transglutaminase-like superfamily AMIR_RS06095 PF03144 Elongation factor Tu domain 2 AMIR_RS06095 PF00009 Elongation factor Tu GTP binding domain AMIR_RS06095 PF06421 GTP-binding protein LepA C-terminus AMIR_RS06095 PF00679 Elongation factor G C-terminus AMIR_RS06110 PF13291 ACT domain AMIR_RS06110 PF04607 Region found in RelA / SpoT proteins AMIR_RS06110 PF02824 TGS domain AMIR_RS06115 PF02018 Carbohydrate binding domain AMIR_RS06115 PF00041 Fibronectin type III domain AMIR_RS06115 PF00704 Glycosyl hydrolases family 18 AMIR_RS06120 PF03060 Nitronate monooxygenase AMIR_RS06130 PF13520 Amino acid permease AMIR_RS06140 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS06140 PF00107 Zinc-binding dehydrogenase AMIR_RS06150 PF00545 ribonuclease AMIR_RS06155 PF01337 Barstar (barnase inhibitor) AMIR_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS06180 PF00005 ABC transporter AMIR_RS06190 PF00009 Elongation factor Tu GTP binding domain AMIR_RS06195 PF01507 Phosphoadenosine phosphosulfate reductase family AMIR_RS06200 PF01507 Phosphoadenosine phosphosulfate reductase family AMIR_RS06210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS06210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS06215 PF04055 Radical SAM superfamily AMIR_RS06220 PF01628 HrcA protein C terminal domain AMIR_RS06225 PF01556 DnaJ C terminal domain AMIR_RS06225 PF00226 DnaJ domain AMIR_RS06225 PF00684 DnaJ central domain AMIR_RS06230 PF04452 RNA methyltransferase AMIR_RS06245 PF12697 Alpha/beta hydrolase family AMIR_RS06250 PF01230 HIT domain AMIR_RS06260 PF02562 PhoH-like protein AMIR_RS06265 PF02130 Uncharacterized protein family UPF0054 AMIR_RS06270 PF01595 Cyclin M transmembrane N-terminal domain AMIR_RS06270 PF03471 Transporter associated domain AMIR_RS06270 PF00571 CBS domain AMIR_RS06285 PF01926 50S ribosome-binding GTPase AMIR_RS06285 PF07650 KH domain AMIR_RS06290 PF11967 Recombination protein O N terminal AMIR_RS06290 PF02565 Recombination protein O C terminal AMIR_RS06295 PF01255 Putative undecaprenyl diphosphate synthase AMIR_RS06310 PF03773 Predicted permease AMIR_RS06320 PF01475 Ferric uptake regulator family AMIR_RS06325 PF01022 Bacterial regulatory protein, arsR family AMIR_RS06345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS06345 PF03129 Anticodon binding domain AMIR_RS06355 PF00484 Carbonic anhydrase AMIR_RS06370 PF01966 HD domain AMIR_RS06370 PF13286 Phosphohydrolase-associated domain AMIR_RS06380 PF03575 Peptidase family S51 AMIR_RS06385 PF04542 Sigma-70 region 2 AMIR_RS06385 PF08281 Sigma-70, region 4 AMIR_RS06385 PF12680 SnoaL-like domain AMIR_RS06390 PF08278 DNA primase DnaG DnaB-binding AMIR_RS06390 PF13662 Toprim domain AMIR_RS06390 PF01807 CHC2 zinc finger AMIR_RS06390 PF08275 DNA primase catalytic core, N-terminal domain AMIR_RS06390 PF10410 DnaB-helicase binding domain of primase AMIR_RS06410 PF02698 DUF218 domain AMIR_RS06415 PF07702 UTRA domain AMIR_RS06415 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS06425 PF00293 NUDIX domain AMIR_RS06435 PF07729 FCD domain AMIR_RS06435 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS06485 PF00589 Phage integrase family AMIR_RS06520 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS06520 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS06530 PF01522 Polysaccharide deacetylase AMIR_RS06535 PF00067 Cytochrome P450 AMIR_RS06540 PF02898 Nitric oxide synthase, oxygenase domain AMIR_RS06545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS06545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS06555 PF08448 PAS fold AMIR_RS06555 PF08447 PAS fold AMIR_RS06555 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS06555 PF00563 EAL domain AMIR_RS06570 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMIR_RS06575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMIR_RS06585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS06585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMIR_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS06600 PF00403 Heavy-metal-associated domain AMIR_RS06600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS06620 PF00005 ABC transporter AMIR_RS06625 PF00005 ABC transporter AMIR_RS06625 PF00664 ABC transporter transmembrane region AMIR_RS06630 PF00069 Protein kinase domain AMIR_RS06640 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS06640 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS06645 PF00550 Phosphopantetheine attachment site AMIR_RS06650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIR_RS06650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS06655 PF00698 Acyl transferase domain AMIR_RS06660 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS06660 PF17853 GGDEF-like domain AMIR_RS06670 PF04973 Nicotinamide mononucleotide transporter AMIR_RS06675 PF01547 Bacterial extracellular solute-binding protein AMIR_RS06685 PF17831 Pyruvate dehydrogenase E1 component middle domain AMIR_RS06685 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS06690 PF11253 Protein of unknown function (DUF3052) AMIR_RS06695 PF00578 AhpC/TSA family AMIR_RS06720 PF04055 Radical SAM superfamily AMIR_RS06720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMIR_RS06725 PF00106 short chain dehydrogenase AMIR_RS06740 PF03099 Biotin/lipoate A/B protein ligase family AMIR_RS06755 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS06765 PF08338 Domain of unknown function (DUF1731) AMIR_RS06765 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS06770 PF02817 e3 binding domain AMIR_RS06770 PF00364 Biotin-requiring enzyme AMIR_RS06770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS06775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS06775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS06790 PF02789 Cytosol aminopeptidase family, N-terminal domain AMIR_RS06790 PF00883 Cytosol aminopeptidase family, catalytic domain AMIR_RS06800 PF01063 Amino-transferase class IV AMIR_RS06805 PF02654 Cobalamin-5-phosphate synthase AMIR_RS06810 PF02277 Phosphoribosyltransferase AMIR_RS06815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMIR_RS06820 PF00248 Aldo/keto reductase family AMIR_RS06835 PF11241 Protein of unknown function (DUF3043) AMIR_RS06840 PF01521 Iron-sulphur cluster biosynthesis AMIR_RS06850 PF13537 Glutamine amidotransferase domain AMIR_RS06850 PF00733 Asparagine synthase AMIR_RS06855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMIR_RS06860 PF12270 Cytochrome c oxidase subunit IV AMIR_RS06865 PF01553 Acyltransferase AMIR_RS06865 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS06865 PF00501 AMP-binding enzyme AMIR_RS06870 PF00591 Glycosyl transferase family, a/b domain AMIR_RS06870 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS06885 PF00510 Cytochrome c oxidase subunit III AMIR_RS06890 PF00034 Cytochrome c AMIR_RS06890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMIR_RS06895 PF00355 Rieske [2Fe-2S] domain AMIR_RS06900 PF13631 Cytochrome b(N-terminal)/b6/petB AMIR_RS06910 PF00929 Exonuclease AMIR_RS06910 PF01541 GIY-YIG catalytic domain AMIR_RS06920 PF00877 NlpC/P60 family AMIR_RS06930 PF13439 Glycosyltransferase Family 4 AMIR_RS06930 PF00534 Glycosyl transferases group 1 AMIR_RS06935 PF00501 AMP-binding enzyme AMIR_RS06955 PF17886 HSP20-like domain found in ArsA AMIR_RS06955 PF02374 Anion-transporting ATPase AMIR_RS06965 PF00480 ROK family AMIR_RS06980 PF01553 Acyltransferase AMIR_RS06985 PF16473 3' exoribonuclease, RNase T-like AMIR_RS06990 PF00365 Phosphofructokinase AMIR_RS06995 PF01474 Class-II DAHP synthetase family AMIR_RS07000 PF00069 Protein kinase domain AMIR_RS07005 PF18367 Rv2175c C-terminal domain of unknown function AMIR_RS07015 PF01593 Flavin containing amine oxidoreductase AMIR_RS07020 PF00348 Polyprenyl synthetase AMIR_RS07025 PF02219 Methylenetetrahydrofolate reductase AMIR_RS07030 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS07055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS07055 PF04073 Aminoacyl-tRNA editing domain AMIR_RS07055 PF03129 Anticodon binding domain AMIR_RS07075 PF07729 FCD domain AMIR_RS07075 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07080 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS07085 PF00271 Helicase conserved C-terminal domain AMIR_RS07085 PF08494 DEAD/H associated AMIR_RS07085 PF00270 DEAD/DEAH box helicase AMIR_RS07095 PF00012 Hsp70 protein AMIR_RS07100 PF00083 Sugar (and other) transporter AMIR_RS07100 PF07690 Major Facilitator Superfamily AMIR_RS07110 PF00154 recA bacterial DNA recombination protein AMIR_RS07115 PF02631 RecX family AMIR_RS07125 PF01081 KDPG and KHG aldolase AMIR_RS07130 PF00920 Dehydratase family AMIR_RS07145 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS07145 PF00890 FAD binding domain AMIR_RS07150 PF13183 4Fe-4S dicluster domain AMIR_RS07150 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIR_RS07170 PF02867 Ribonucleotide reductase, barrel domain AMIR_RS07170 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AMIR_RS07175 PF03477 ATP cone domain AMIR_RS07185 PF01726 LexA DNA binding domain AMIR_RS07185 PF00717 Peptidase S24-like AMIR_RS07195 PF13167 GTP-binding GTPase N-terminal AMIR_RS07195 PF01926 50S ribosome-binding GTPase AMIR_RS07195 PF16360 GTP-binding GTPase Middle Region AMIR_RS07210 PF01678 Diaminopimelate epimerase AMIR_RS07225 PF03993 Domain of Unknown Function (DUF349) AMIR_RS07235 PF00919 Uncharacterized protein family UPF0004 AMIR_RS07235 PF04055 Radical SAM superfamily AMIR_RS07240 PF16868 NMT1-like family AMIR_RS07245 PF08521 Two-component sensor kinase N-terminal AMIR_RS07245 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS07250 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS07250 PF00072 Response regulator receiver domain AMIR_RS07255 PF00005 ABC transporter AMIR_RS07260 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS07265 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS07300 PF04493 Endonuclease V AMIR_RS07305 PF02056 Family 4 glycosyl hydrolase AMIR_RS07305 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMIR_RS07310 PF00962 Adenosine/AMP deaminase AMIR_RS07315 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIR_RS07315 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS07325 PF00326 Prolyl oligopeptidase family AMIR_RS07325 PF07676 WD40-like Beta Propeller Repeat AMIR_RS07330 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS07335 PF08544 GHMP kinases C terminal AMIR_RS07335 PF10509 Galactokinase galactose-binding signature AMIR_RS07335 PF00288 GHMP kinases N terminal domain AMIR_RS07340 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMIR_RS07340 PF18357 Diphteria toxin repressor SH3 domain AMIR_RS07340 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMIR_RS07345 PF00581 Rhodanese-like domain AMIR_RS07355 PF00850 Histone deacetylase domain AMIR_RS07365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS07370 PF07702 UTRA domain AMIR_RS07370 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07390 PF01139 tRNA-splicing ligase RtcB AMIR_RS07395 PF01061 ABC-2 type transporter AMIR_RS07400 PF13732 Domain of unknown function (DUF4162) AMIR_RS07400 PF00005 ABC transporter AMIR_RS07445 PF00171 Aldehyde dehydrogenase family AMIR_RS07450 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS07460 PF00701 Dihydrodipicolinate synthetase family AMIR_RS07465 PF13378 Enolase C-terminal domain-like AMIR_RS07465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS07485 PF05681 Fumarate hydratase (Fumerase) AMIR_RS07485 PF05683 Fumarase C-terminus AMIR_RS07490 PF04542 Sigma-70 region 2 AMIR_RS07490 PF04545 Sigma-70, region 4 AMIR_RS07490 PF00140 Sigma-70 factor, region 1.2 AMIR_RS07490 PF04539 Sigma-70 region 3 AMIR_RS07495 PF02580 D-Tyr-tRNA(Tyr) deacylase AMIR_RS07500 PF17827 PrmC N-terminal domain AMIR_RS07500 PF05175 Methyltransferase small domain AMIR_RS07515 PF00294 pfkB family carbohydrate kinase AMIR_RS07520 PF04227 Indigoidine synthase A like protein AMIR_RS07535 PF04851 Type III restriction enzyme, res subunit AMIR_RS07540 PF13407 Periplasmic binding protein domain AMIR_RS07545 PF00005 ABC transporter AMIR_RS07550 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS07555 PF01047 MarR family AMIR_RS07555 PF00480 ROK family AMIR_RS07570 PF04539 Sigma-70 region 3 AMIR_RS07570 PF04545 Sigma-70, region 4 AMIR_RS07570 PF04542 Sigma-70 region 2 AMIR_RS07570 PF00140 Sigma-70 factor, region 1.2 AMIR_RS07575 PF00480 ROK family AMIR_RS07580 PF00459 Inositol monophosphatase family AMIR_RS07600 PF00692 dUTPase AMIR_RS07625 PF02080 TrkA-C domain AMIR_RS07625 PF02254 TrkA-N domain AMIR_RS07630 PF02080 TrkA-C domain AMIR_RS07630 PF02254 TrkA-N domain AMIR_RS07635 PF13520 Amino acid permease AMIR_RS07640 PF05958 tRNA (Uracil-5-)-methyltransferase AMIR_RS07640 PF01938 TRAM domain AMIR_RS07645 PF02779 Transketolase, pyrimidine binding domain AMIR_RS07645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS07645 PF02780 Transketolase, C-terminal domain AMIR_RS07655 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS07655 PF00072 Response regulator receiver domain AMIR_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS07660 PF00672 HAMP domain AMIR_RS07660 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS07750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS07750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS07750 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS07755 PF02803 Thiolase, C-terminal domain AMIR_RS07755 PF00108 Thiolase, N-terminal domain AMIR_RS07775 PF01612 3'-5' exonuclease AMIR_RS07775 PF00570 HRDC domain AMIR_RS07780 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS07780 PF00072 Response regulator receiver domain AMIR_RS07795 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMIR_RS07800 PF01593 Flavin containing amine oxidoreductase AMIR_RS07805 PF06778 Chlorite dismutase AMIR_RS07810 PF00082 Subtilase family AMIR_RS07810 PF05922 Peptidase inhibitor I9 AMIR_RS07830 PF05114 Protein of unknown function (DUF692) AMIR_RS07860 PF01641 SelR domain AMIR_RS07875 PF07729 FCD domain AMIR_RS07875 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07880 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS07880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS07880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS07885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS07885 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS07885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS07890 PF13298 DNA polymerase Ligase (LigD) AMIR_RS07890 PF01068 ATP dependent DNA ligase domain AMIR_RS07890 PF04679 ATP dependent DNA ligase C terminal region AMIR_RS07925 PF00892 EamA-like transporter family AMIR_RS07930 PF04679 ATP dependent DNA ligase C terminal region AMIR_RS07930 PF01068 ATP dependent DNA ligase domain AMIR_RS07950 PF00005 ABC transporter AMIR_RS07950 PF12848 ABC transporter AMIR_RS07955 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS07960 PF10282 Lactonase, 7-bladed beta-propeller AMIR_RS07965 PF00202 Aminotransferase class-III AMIR_RS07990 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS08010 PF07516 SecA Wing and Scaffold domain AMIR_RS08010 PF01043 SecA preprotein cross-linking domain AMIR_RS08010 PF07517 SecA DEAD-like domain AMIR_RS08025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS08025 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS08025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS08050 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS08050 PF17922 Tetracyclin repressor-like, C-terminal domain AMIR_RS08065 PF01575 MaoC like domain AMIR_RS08080 PF00107 Zinc-binding dehydrogenase AMIR_RS08080 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS08090 PF05922 Peptidase inhibitor I9 AMIR_RS08090 PF00082 Subtilase family AMIR_RS08095 PF00999 Sodium/hydrogen exchanger family AMIR_RS08105 PF02224 Cytidylate kinase AMIR_RS08115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMIR_RS08115 PF01926 50S ribosome-binding GTPase AMIR_RS08120 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS08120 PF00072 Response regulator receiver domain AMIR_RS08125 PF07730 Histidine kinase AMIR_RS08345 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS08345 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS08345 PF00563 EAL domain AMIR_RS08350 PF00075 RNase H AMIR_RS08365 PF16499 Alpha galactosidase A AMIR_RS08365 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIR_RS08370 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS08370 PF00931 NB-ARC domain AMIR_RS08370 PF03704 Bacterial transcriptional activator domain AMIR_RS08390 PF00005 ABC transporter AMIR_RS08395 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIR_RS08395 PF00005 ABC transporter AMIR_RS08425 PF00480 ROK family AMIR_RS08425 PF01047 MarR family AMIR_RS08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS08435 PF00005 ABC transporter AMIR_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08445 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS08450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS08450 PF00005 ABC transporter AMIR_RS08455 PF00232 Glycosyl hydrolase family 1 AMIR_RS08480 PF03073 TspO/MBR family AMIR_RS08485 PF04978 Protein of unknown function (DUF664) AMIR_RS08490 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMIR_RS08490 PF05491 RuvB C-terminal winged helix domain AMIR_RS08490 PF17864 RuvB AAA lid domain AMIR_RS08495 PF07499 RuvA, C-terminal domain AMIR_RS08495 PF01330 RuvA N terminal domain AMIR_RS08500 PF02075 Crossover junction endodeoxyribonuclease RuvC AMIR_RS08505 PF00563 EAL domain AMIR_RS08505 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS08505 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS08510 PF02699 Preprotein translocase subunit AMIR_RS08515 PF02355 Protein export membrane protein AMIR_RS08515 PF07549 SecD/SecF GG Motif AMIR_RS08520 PF02355 Protein export membrane protein AMIR_RS08520 PF07549 SecD/SecF GG Motif AMIR_RS08525 PF00156 Phosphoribosyl transferase domain AMIR_RS08530 PF02824 TGS domain AMIR_RS08530 PF04607 Region found in RelA / SpoT proteins AMIR_RS08530 PF13291 ACT domain AMIR_RS08535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS08540 PF00753 Metallo-beta-lactamase superfamily AMIR_RS08545 PF03129 Anticodon binding domain AMIR_RS08545 PF13393 Histidyl-tRNA synthetase AMIR_RS08585 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS08590 PF08608 Wyosine base formation AMIR_RS08590 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS08605 PF01039 Carboxyl transferase domain AMIR_RS08610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS08610 PF00289 Biotin carboxylase, N-terminal domain AMIR_RS08610 PF02785 Biotin carboxylase C-terminal domain AMIR_RS08615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS08615 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS08615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS08625 PF00082 Subtilase family AMIR_RS08625 PF05922 Peptidase inhibitor I9 AMIR_RS08630 PF05922 Peptidase inhibitor I9 AMIR_RS08630 PF00082 Subtilase family AMIR_RS08635 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS08635 PF01336 OB-fold nucleic acid binding domain AMIR_RS08635 PF02938 GAD domain AMIR_RS08650 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMIR_RS08655 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS08655 PF00672 HAMP domain AMIR_RS08660 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS08660 PF00072 Response regulator receiver domain AMIR_RS08670 PF04234 CopC domain AMIR_RS08675 PF03167 Uracil DNA glycosylase superfamily AMIR_RS08690 PF02397 Bacterial sugar transferase AMIR_RS08695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS08695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS08700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIR_RS08705 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS08710 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS08725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS08730 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS08760 PF00535 Glycosyl transferase family 2 AMIR_RS08760 PF00534 Glycosyl transferases group 1 AMIR_RS08765 PF01943 Polysaccharide biosynthesis protein AMIR_RS08770 PF00535 Glycosyl transferase family 2 AMIR_RS08805 PF00400 WD domain, G-beta repeat AMIR_RS08805 PF00069 Protein kinase domain AMIR_RS08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS08815 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS08820 PF13673 Acetyltransferase (GNAT) domain AMIR_RS08845 PF16921 Tex protein YqgF-like domain AMIR_RS08845 PF00575 S1 RNA binding domain AMIR_RS08845 PF09371 Tex-like protein N-terminal domain AMIR_RS08845 PF17674 HHH domain AMIR_RS08850 PF00248 Aldo/keto reductase family AMIR_RS08855 PF08241 Methyltransferase domain AMIR_RS08855 PF12697 Alpha/beta hydrolase family AMIR_RS08860 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS08880 PF03631 Virulence factor BrkB AMIR_RS08895 PF00005 ABC transporter AMIR_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08910 PF00085 Thioredoxin AMIR_RS08915 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS08920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08930 PF02571 Precorrin-6x reductase CbiJ/CobK AMIR_RS08935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08940 PF02570 Precorrin-8X methylmutase AMIR_RS08945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS08945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS08950 PF02514 CobN/Magnesium Chelatase AMIR_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08965 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08970 PF00232 Glycosyl hydrolase family 1 AMIR_RS08975 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS08985 PF00942 Cellulose binding domain AMIR_RS08985 PF03442 Carbohydrate binding domain X2 AMIR_RS08990 PF06305 Lipopolysaccharide assembly protein A domain AMIR_RS08995 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AMIR_RS08995 PF00400 WD domain, G-beta repeat AMIR_RS09000 PF00480 ROK family AMIR_RS09005 PF01261 Xylose isomerase-like TIM barrel AMIR_RS09010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS09010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS09035 PF03364 Polyketide cyclase / dehydrase and lipid transport AMIR_RS09040 PF06445 GyrI-like small molecule binding domain AMIR_RS09040 PF12833 Helix-turn-helix domain AMIR_RS09045 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS09045 PF13823 Alcohol dehydrogenase GroES-associated AMIR_RS09045 PF00107 Zinc-binding dehydrogenase AMIR_RS09055 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS09055 PF00072 Response regulator receiver domain AMIR_RS09075 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMIR_RS09075 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMIR_RS09075 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMIR_RS09080 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS09090 PF01022 Bacterial regulatory protein, arsR family AMIR_RS09110 PF02467 Transcription factor WhiB AMIR_RS09130 PF00877 NlpC/P60 family AMIR_RS09140 PF18416 N-acetylglucosamine binding protein domain 2 AMIR_RS09140 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIR_RS09150 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09155 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09160 PF14310 Fibronectin type III-like domain AMIR_RS09160 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS09160 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS09170 PF05448 Acetyl xylan esterase (AXE1) AMIR_RS09180 PF02013 Cellulose or protein binding domain AMIR_RS09180 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS09195 PF08281 Sigma-70, region 4 AMIR_RS09195 PF04542 Sigma-70 region 2 AMIR_RS09225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS09230 PF00245 Alkaline phosphatase AMIR_RS09245 PF00544 Pectate lyase AMIR_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS09270 PF13378 Enolase C-terminal domain-like AMIR_RS09275 PF00544 Pectate lyase AMIR_RS09285 PF02983 Alpha-lytic protease prodomain AMIR_RS09295 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS09300 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS09305 PF00005 ABC transporter AMIR_RS09310 PF13407 Periplasmic binding protein domain AMIR_RS09320 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIR_RS09320 PF02018 Carbohydrate binding domain AMIR_RS09325 PF04616 Glycosyl hydrolases family 43 AMIR_RS09325 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AMIR_RS09335 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS09340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS09345 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS09350 PF11762 L-arabinose isomerase C-terminal domain AMIR_RS09350 PF02610 L-arabinose isomerase AMIR_RS09355 PF13407 Periplasmic binding protein domain AMIR_RS09360 PF00005 ABC transporter AMIR_RS09365 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS09375 PF18370 Rhamnogalacturonan I lyases beta-sheet domain AMIR_RS09390 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09415 PF04231 Endonuclease I AMIR_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09425 PF07730 Histidine kinase AMIR_RS09435 PF00072 Response regulator receiver domain AMIR_RS09435 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09445 PF14572 Phosphoribosyl synthetase-associated domain AMIR_RS09445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIR_RS09450 PF04434 SWIM zinc finger AMIR_RS09455 PF05762 VWA domain containing CoxE-like protein AMIR_RS09465 PF07728 AAA domain (dynein-related subfamily) AMIR_RS09470 PF13569 Domain of unknown function (DUF4132) AMIR_RS09475 PF13569 Domain of unknown function (DUF4132) AMIR_RS09480 PF13569 Domain of unknown function (DUF4132) AMIR_RS09485 PF13439 Glycosyltransferase Family 4 AMIR_RS09485 PF00534 Glycosyl transferases group 1 AMIR_RS09510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS09525 PF04545 Sigma-70, region 4 AMIR_RS09525 PF00140 Sigma-70 factor, region 1.2 AMIR_RS09525 PF04542 Sigma-70 region 2 AMIR_RS09525 PF04539 Sigma-70 region 3 AMIR_RS09530 PF03976 Polyphosphate kinase 2 (PPK2) AMIR_RS09535 PF04226 Transglycosylase associated protein AMIR_RS09550 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS09550 PF00107 Zinc-binding dehydrogenase AMIR_RS09560 PF13185 GAF domain AMIR_RS09560 PF07730 Histidine kinase AMIR_RS09560 PF13492 GAF domain AMIR_RS09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09570 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09570 PF00072 Response regulator receiver domain AMIR_RS09575 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS09575 PF00571 CBS domain AMIR_RS09580 PF00582 Universal stress protein family AMIR_RS09585 PF13380 CoA binding domain AMIR_RS09585 PF13607 Succinyl-CoA ligase like flavodoxin domain AMIR_RS09610 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMIR_RS09610 PF09363 XFP C-terminal domain AMIR_RS09610 PF09364 XFP N-terminal domain AMIR_RS09615 PF00871 Acetokinase family AMIR_RS09620 PF00069 Protein kinase domain AMIR_RS09620 PF03793 PASTA domain AMIR_RS09630 PF01757 Acyltransferase family AMIR_RS09640 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMIR_RS09650 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09670 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIR_RS09675 PF11066 Protein of unknown function (DUF2867) AMIR_RS09675 PF13460 NAD(P)H-binding AMIR_RS09685 PF00072 Response regulator receiver domain AMIR_RS09685 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS09690 PF00582 Universal stress protein family AMIR_RS09695 PF00582 Universal stress protein family AMIR_RS09705 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09705 PF00072 Response regulator receiver domain AMIR_RS09710 PF07730 Histidine kinase AMIR_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09720 PF00005 ABC transporter AMIR_RS09755 PF03459 TOBE domain AMIR_RS09755 PF00005 ABC transporter AMIR_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09775 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09775 PF02909 Tetracyclin repressor-like, C-terminal domain AMIR_RS09780 PF07690 Major Facilitator Superfamily AMIR_RS09790 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS09790 PF13493 Domain of unknown function (DUF4118) AMIR_RS09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09790 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIR_RS09790 PF00582 Universal stress protein family AMIR_RS09800 PF02743 Cache domain AMIR_RS09800 PF00672 HAMP domain AMIR_RS09800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS09820 PF00067 Cytochrome P450 AMIR_RS09825 PF02146 Sir2 family AMIR_RS09845 PF01047 MarR family AMIR_RS09860 PF12695 Alpha/beta hydrolase family AMIR_RS09865 PF00072 Response regulator receiver domain AMIR_RS09865 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09875 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09890 PF07477 Glycosyl hydrolase family 67 C-terminus AMIR_RS09890 PF07488 Glycosyl hydrolase family 67 middle domain AMIR_RS09890 PF03648 Glycosyl hydrolase family 67 N-terminus AMIR_RS09895 PF08533 Beta-galactosidase C-terminal domain AMIR_RS09895 PF02449 Beta-galactosidase AMIR_RS09895 PF08532 Beta-galactosidase trimerisation domain AMIR_RS09905 PF01229 Glycosyl hydrolases family 39 AMIR_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09925 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS09925 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS09925 PF14310 Fibronectin type III-like domain AMIR_RS09930 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09940 PF17871 AAA lid domain AMIR_RS09940 PF02861 Clp amino terminal domain, pathogenicity island component AMIR_RS09940 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS09940 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS09940 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS09965 PF01636 Phosphotransferase enzyme family AMIR_RS09970 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS09985 PF03631 Virulence factor BrkB AMIR_RS09995 PF00202 Aminotransferase class-III AMIR_RS10000 PF00982 Glycosyltransferase family 20 AMIR_RS10015 PF01761 3-dehydroquinate synthase AMIR_RS10025 PF00483 Nucleotidyl transferase AMIR_RS10040 PF01274 Malate synthase AMIR_RS10045 PF00463 Isocitrate lyase family AMIR_RS10050 PF09856 Predicted transcriptional regulator (DUF2083) AMIR_RS10050 PF06114 IrrE N-terminal-like domain AMIR_RS10050 PF01381 Helix-turn-helix AMIR_RS10060 PF05231 MASE1 AMIR_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS10060 PF07730 Histidine kinase AMIR_RS10065 PF00072 Response regulator receiver domain AMIR_RS10065 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS10075 PF00082 Subtilase family AMIR_RS10075 PF05922 Peptidase inhibitor I9 AMIR_RS10080 PF01494 FAD binding domain AMIR_RS10105 PF04686 Streptomyces sporulation and cell division protein, SsgA AMIR_RS10110 PF04542 Sigma-70 region 2 AMIR_RS10110 PF04545 Sigma-70, region 4 AMIR_RS10145 PF00202 Aminotransferase class-III AMIR_RS10155 PF03301 Tryptophan 2,3-dioxygenase AMIR_RS10160 PF00266 Aminotransferase class-V AMIR_RS10175 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS10180 PF00324 Amino acid permease AMIR_RS10190 PF00005 ABC transporter AMIR_RS10190 PF00664 ABC transporter transmembrane region AMIR_RS10195 PF10502 Signal peptidase, peptidase S26 AMIR_RS10205 PF03741 Integral membrane protein TerC family AMIR_RS10215 PF01494 FAD binding domain AMIR_RS10220 PF02665 Nitrate reductase gamma subunit AMIR_RS10225 PF02613 Nitrate reductase delta subunit AMIR_RS10230 PF14711 Respiratory nitrate reductase beta C-terminal AMIR_RS10230 PF13247 4Fe-4S dicluster domain AMIR_RS10235 PF01568 Molydopterin dinucleotide binding domain AMIR_RS10235 PF00384 Molybdopterin oxidoreductase AMIR_RS10240 PF07690 Major Facilitator Superfamily AMIR_RS10265 PF00764 Arginosuccinate synthase AMIR_RS10270 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AMIR_RS10270 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AMIR_RS10270 PF08531 Alpha-L-rhamnosidase N-terminal domain AMIR_RS10270 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AMIR_RS10275 PF00553 Cellulose binding domain AMIR_RS10275 PF01341 Glycosyl hydrolases family 6 AMIR_RS10275 PF00041 Fibronectin type III domain AMIR_RS10280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMIR_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10290 PF00571 CBS domain AMIR_RS10290 PF00005 ABC transporter AMIR_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10320 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10325 PF00005 ABC transporter AMIR_RS10325 PF08402 TOBE domain AMIR_RS10345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS10350 PF00576 HIUase/Transthyretin family AMIR_RS10355 PF17853 GGDEF-like domain AMIR_RS10355 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS10355 PF05651 Putative sugar diacid recognition AMIR_RS10385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS10395 PF04229 GrpB protein AMIR_RS10400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS10400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS10405 PF00188 Cysteine-rich secretory protein family AMIR_RS10410 PF13520 Amino acid permease AMIR_RS10415 PF00120 Glutamine synthetase, catalytic domain AMIR_RS10420 PF07722 Peptidase C26 AMIR_RS10425 PF00171 Aldehyde dehydrogenase family AMIR_RS10435 PF07729 FCD domain AMIR_RS10435 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS10455 PF13732 Domain of unknown function (DUF4162) AMIR_RS10455 PF00005 ABC transporter AMIR_RS10475 PF03129 Anticodon binding domain AMIR_RS10475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS10475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS10480 PF01230 HIT domain AMIR_RS10490 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS10495 PF03279 Bacterial lipid A biosynthesis acyltransferase AMIR_RS10500 PF13439 Glycosyltransferase Family 4 AMIR_RS10505 PF00293 NUDIX domain AMIR_RS10510 PF08000 Bacterial PH domain AMIR_RS10525 PF01979 Amidohydrolase family AMIR_RS10535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AMIR_RS10550 PF00202 Aminotransferase class-III AMIR_RS10555 PF00171 Aldehyde dehydrogenase family AMIR_RS10565 PF00679 Elongation factor G C-terminus AMIR_RS10565 PF03764 Elongation factor G, domain IV AMIR_RS10565 PF00009 Elongation factor Tu GTP binding domain AMIR_RS10565 PF03144 Elongation factor Tu domain 2 AMIR_RS10565 PF14492 Elongation Factor G, domain II AMIR_RS10570 PF01680 SOR/SNZ family AMIR_RS10575 PF01174 SNO glutamine amidotransferase family AMIR_RS10580 PF01709 Transcriptional regulator AMIR_RS10595 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10595 PF08362 YcdC-like protein, C-terminal region AMIR_RS10600 PF07690 Major Facilitator Superfamily AMIR_RS10605 PF00067 Cytochrome P450 AMIR_RS10610 PF00067 Cytochrome P450 AMIR_RS10630 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10645 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS10650 PF03781 Sulfatase-modifying factor enzyme 1 AMIR_RS10650 PF12867 DinB superfamily AMIR_RS10660 PF10017 Histidine-specific methyltransferase, SAM-dependent AMIR_RS10695 PF00330 Aconitase family (aconitate hydratase) AMIR_RS10695 PF00694 Aconitase C-terminal domain AMIR_RS10700 PF00005 ABC transporter AMIR_RS10720 PF02146 Sir2 family AMIR_RS10730 PF00501 AMP-binding enzyme AMIR_RS10730 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS10735 PF00877 NlpC/P60 family AMIR_RS10740 PF04542 Sigma-70 region 2 AMIR_RS10740 PF08281 Sigma-70, region 4 AMIR_RS10750 PF12804 MobA-like NTP transferase domain AMIR_RS10755 PF05724 Thiopurine S-methyltransferase (TPMT) AMIR_RS10760 PF17863 AAA lid domain AMIR_RS10760 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS10765 PF01882 Protein of unknown function DUF58 AMIR_RS10770 PF07584 Aerotolerance regulator N-terminal AMIR_RS10770 PF13519 von Willebrand factor type A domain AMIR_RS10785 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS10785 PF00672 HAMP domain AMIR_RS10785 PF13426 PAS domain AMIR_RS10790 PF00072 Response regulator receiver domain AMIR_RS10790 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS10840 PF02470 MlaD protein AMIR_RS10865 PF01341 Glycosyl hydrolases family 6 AMIR_RS10865 PF00553 Cellulose binding domain AMIR_RS10870 PF02011 Glycosyl hydrolase family 48 AMIR_RS10870 PF00553 Cellulose binding domain AMIR_RS10870 PF00041 Fibronectin type III domain AMIR_RS10875 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS10875 PF14310 Fibronectin type III-like domain AMIR_RS10875 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS10880 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10900 PF02449 Beta-galactosidase AMIR_RS10900 PF08532 Beta-galactosidase trimerisation domain AMIR_RS10900 PF08533 Beta-galactosidase C-terminal domain AMIR_RS10910 PF03091 CutA1 divalent ion tolerance protein AMIR_RS10915 PF13411 MerR HTH family regulatory protein AMIR_RS10930 PF01565 FAD binding domain AMIR_RS10930 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS10930 PF13183 4Fe-4S dicluster domain AMIR_RS10945 PF00762 Ferrochelatase AMIR_RS10960 PF00106 short chain dehydrogenase AMIR_RS10990 PF00041 Fibronectin type III domain AMIR_RS10990 PF01341 Glycosyl hydrolases family 6 AMIR_RS10990 PF00553 Cellulose binding domain AMIR_RS10995 PF01078 Magnesium chelatase, subunit ChlI AMIR_RS10995 PF17863 AAA lid domain AMIR_RS11015 PF00672 HAMP domain AMIR_RS11015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS11020 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS11035 PF01406 tRNA synthetases class I (C) catalytic domain AMIR_RS11040 PF00082 Subtilase family AMIR_RS11040 PF05922 Peptidase inhibitor I9 AMIR_RS11065 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS11065 PF00072 Response regulator receiver domain AMIR_RS11070 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS11070 PF00072 Response regulator receiver domain AMIR_RS11075 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AMIR_RS11075 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11075 PF00672 HAMP domain AMIR_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11075 PF08448 PAS fold AMIR_RS11085 PF02574 Homocysteine S-methyltransferase AMIR_RS11085 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMIR_RS11085 PF02607 B12 binding domain AMIR_RS11085 PF02310 B12 binding domain AMIR_RS11085 PF00809 Pterin binding enzyme AMIR_RS11090 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS11100 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS11100 PF02909 Tetracyclin repressor-like, C-terminal domain AMIR_RS11105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS11110 PF00106 short chain dehydrogenase AMIR_RS11120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMIR_RS11125 PF03547 Membrane transport protein AMIR_RS11145 PF02163 Peptidase family M50 AMIR_RS11145 PF00571 CBS domain AMIR_RS11155 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11155 PF00072 Response regulator receiver domain AMIR_RS11170 PF08704 tRNA methyltransferase complex GCD14 subunit AMIR_RS11185 PF16450 Proteasomal ATPase OB C-terminal domain AMIR_RS11185 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS11185 PF17758 Proteasomal ATPase OB N-terminal domain AMIR_RS11190 PF00072 Response regulator receiver domain AMIR_RS11190 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11195 PF07730 Histidine kinase AMIR_RS11200 PF00005 ABC transporter AMIR_RS11215 PF00293 NUDIX domain AMIR_RS11225 PF03136 Pup-ligase protein AMIR_RS11230 PF05639 Pup-like protein AMIR_RS11235 PF00227 Proteasome subunit AMIR_RS11240 PF00227 Proteasome subunit AMIR_RS11245 PF00106 short chain dehydrogenase AMIR_RS11255 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11260 PF01569 PAP2 superfamily AMIR_RS11265 PF03136 Pup-ligase protein AMIR_RS11275 PF13280 WYL domain AMIR_RS11280 PF13280 WYL domain AMIR_RS11290 PF02416 mttA/Hcf106 family AMIR_RS11295 PF00902 Sec-independent protein translocase protein (TatC) AMIR_RS11300 PF00781 Diacylglycerol kinase catalytic domain AMIR_RS11305 PF08148 DSHCT (NUC185) domain AMIR_RS11305 PF00270 DEAD/DEAH box helicase AMIR_RS11305 PF00271 Helicase conserved C-terminal domain AMIR_RS11315 PF13530 Sterol carrier protein domain AMIR_RS11315 PF17668 Acetyltransferase (GNAT) domain AMIR_RS11320 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIR_RS11320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIR_RS11325 PF01321 Creatinase/Prolidase N-terminal domain AMIR_RS11325 PF00557 Metallopeptidase family M24 AMIR_RS11330 PF01037 Lrp/AsnC ligand binding domain AMIR_RS11345 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS11370 PF03880 DbpA RNA binding domain AMIR_RS11370 PF00270 DEAD/DEAH box helicase AMIR_RS11370 PF00271 Helicase conserved C-terminal domain AMIR_RS11375 PF04607 Region found in RelA / SpoT proteins AMIR_RS11390 PF04264 YceI-like domain AMIR_RS11395 PF01047 MarR family AMIR_RS11400 PF17863 AAA lid domain AMIR_RS11400 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS11410 PF00501 AMP-binding enzyme AMIR_RS11410 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS11420 PF02310 B12 binding domain AMIR_RS11420 PF01642 Methylmalonyl-CoA mutase AMIR_RS11435 PF01751 Toprim domain AMIR_RS11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11435 PF00986 DNA gyrase B subunit, carboxyl terminus AMIR_RS11435 PF00204 DNA gyrase B AMIR_RS11440 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIR_RS11440 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIR_RS11460 PF03358 NADPH-dependent FMN reductase AMIR_RS11465 PF01634 ATP phosphoribosyltransferase AMIR_RS11465 PF08029 HisG, C-terminal domain AMIR_RS11490 PF00005 ABC transporter AMIR_RS11510 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS11520 PF00480 ROK family AMIR_RS11525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS11525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS11535 PF04030 D-arabinono-1,4-lactone oxidase AMIR_RS11535 PF01565 FAD binding domain AMIR_RS11560 PF13649 Methyltransferase domain AMIR_RS11560 PF17827 PrmC N-terminal domain AMIR_RS11575 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS11580 PF00296 Luciferase-like monooxygenase AMIR_RS11600 PF00771 FHIPEP family AMIR_RS11610 PF00072 Response regulator receiver domain AMIR_RS11620 PF00072 Response regulator receiver domain AMIR_RS11625 PF01739 CheR methyltransferase, SAM binding domain AMIR_RS11625 PF03705 CheR methyltransferase, all-alpha domain AMIR_RS11630 PF01339 CheB methylesterase AMIR_RS11630 PF00072 Response regulator receiver domain AMIR_RS11645 PF01584 CheW-like domain AMIR_RS11650 PF01584 CheW-like domain AMIR_RS11650 PF02895 Signal transducing histidine kinase, homodimeric domain AMIR_RS11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11650 PF01627 Hpt domain AMIR_RS11650 PF00072 Response regulator receiver domain AMIR_RS11665 PF01312 FlhB HrpN YscU SpaS Family AMIR_RS11670 PF01311 Bacterial export proteins, family 1 AMIR_RS11675 PF01313 Bacterial export proteins, family 3 AMIR_RS11680 PF00813 FliP family AMIR_RS11690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMIR_RS11705 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMIR_RS11705 PF00691 OmpA family AMIR_RS11710 PF01618 MotA/TolQ/ExbB proton channel family AMIR_RS11720 PF00460 Flagella basal body rod protein AMIR_RS11720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11735 PF01464 Transglycosylase SLT domain AMIR_RS11745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS11745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS11745 PF18269 T3SS EscN ATPase C-terminal domain AMIR_RS11755 PF14841 FliG middle domain AMIR_RS11755 PF14842 FliG N-terminal domain AMIR_RS11755 PF01706 FliG C-terminal domain AMIR_RS11760 PF08345 Flagellar M-ring protein C-terminal AMIR_RS11760 PF01514 Secretory protein of YscJ/FliF family AMIR_RS11765 PF02049 Flagellar hook-basal body complex protein FliE AMIR_RS11770 PF00460 Flagella basal body rod protein AMIR_RS11770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11785 PF02561 Flagellar protein FliS AMIR_RS11795 PF07196 Flagellin hook IN motif AMIR_RS11795 PF00700 Bacterial flagellin C-terminal helical region AMIR_RS11795 PF00669 Bacterial flagellin N-terminal helical region AMIR_RS11800 PF04542 Sigma-70 region 2 AMIR_RS11800 PF04539 Sigma-70 region 3 AMIR_RS11800 PF04545 Sigma-70, region 4 AMIR_RS11810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11810 PF00460 Flagella basal body rod protein AMIR_RS11820 PF02623 FliW protein AMIR_RS11825 PF02599 Global regulator protein family AMIR_RS11830 PF00082 Subtilase family AMIR_RS11830 PF05922 Peptidase inhibitor I9 AMIR_RS11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11835 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11835 PF08448 PAS fold AMIR_RS11835 PF13188 PAS domain AMIR_RS11835 PF00072 Response regulator receiver domain AMIR_RS11840 PF00072 Response regulator receiver domain AMIR_RS11855 PF16736 Single Cache-like AMIR_RS11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11855 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11855 PF00989 PAS fold AMIR_RS11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11865 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11865 PF08448 PAS fold AMIR_RS11865 PF13426 PAS domain AMIR_RS11865 PF00072 Response regulator receiver domain AMIR_RS11875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIR_RS11875 PF01627 Hpt domain AMIR_RS11875 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11875 PF00072 Response regulator receiver domain AMIR_RS11875 PF00672 HAMP domain AMIR_RS11880 PF00072 Response regulator receiver domain AMIR_RS11880 PF00158 Sigma-54 interaction domain AMIR_RS11880 PF02954 Bacterial regulatory protein, Fis family AMIR_RS11905 PF01047 MarR family AMIR_RS11925 PF01590 GAF domain AMIR_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11925 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11925 PF00360 Phytochrome region AMIR_RS11925 PF08446 PAS fold AMIR_RS11940 PF01037 Lrp/AsnC ligand binding domain AMIR_RS11945 PF05977 Transmembrane secretion effector AMIR_RS11950 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS11950 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS11985 PF00183 Hsp90 protein AMIR_RS12025 PF00296 Luciferase-like monooxygenase AMIR_RS12030 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS12030 PF04954 Siderophore-interacting protein AMIR_RS12040 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12065 PF00005 ABC transporter AMIR_RS12070 PF00072 Response regulator receiver domain AMIR_RS12070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS12075 PF07730 Histidine kinase AMIR_RS12100 PF00582 Universal stress protein family AMIR_RS12105 PF04055 Radical SAM superfamily AMIR_RS12110 PF01228 Glycine radical AMIR_RS12110 PF02901 Pyruvate formate lyase-like AMIR_RS12125 PF00746 LPXTG cell wall anchor motif AMIR_RS12125 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AMIR_RS12125 PF04650 YSIRK type signal peptide AMIR_RS12125 PF17961 Bacterial Ig domain AMIR_RS12125 PF17210 SdrD B-like domain AMIR_RS12145 PF05199 GMC oxidoreductase AMIR_RS12145 PF00732 GMC oxidoreductase AMIR_RS12155 PF12697 Alpha/beta hydrolase family AMIR_RS12160 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS12160 PF01565 FAD binding domain AMIR_RS12190 PF08220 DeoR-like helix-turn-helix domain AMIR_RS12195 PF00999 Sodium/hydrogen exchanger family AMIR_RS12200 PF11774 Lsr2 AMIR_RS12205 PF12320 Type 5 capsule protein repressor C-terminal domain AMIR_RS12205 PF00149 Calcineurin-like phosphoesterase AMIR_RS12225 PF04954 Siderophore-interacting protein AMIR_RS12225 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS12235 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS12235 PF00107 Zinc-binding dehydrogenase AMIR_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS12245 PF03466 LysR substrate binding domain AMIR_RS12255 PF01169 Uncharacterized protein family UPF0016 AMIR_RS12290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS12290 PF00005 ABC transporter AMIR_RS12295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS12300 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12305 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12305 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS12310 PF01638 HxlR-like helix-turn-helix AMIR_RS12315 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS12315 PF00107 Zinc-binding dehydrogenase AMIR_RS12330 PF00072 Response regulator receiver domain AMIR_RS12330 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS12335 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS12345 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMIR_RS12345 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMIR_RS12345 PF00703 Glycosyl hydrolases family 2 AMIR_RS12345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMIR_RS12355 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS12355 PF07729 FCD domain AMIR_RS12385 PF18416 N-acetylglucosamine binding protein domain 2 AMIR_RS12385 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIR_RS12390 PF03741 Integral membrane protein TerC family AMIR_RS12395 PF00857 Isochorismatase family AMIR_RS12445 PF13462 Thioredoxin AMIR_RS12445 PF00069 Protein kinase domain AMIR_RS12465 PF00067 Cytochrome P450 AMIR_RS12470 PF00668 Condensation domain AMIR_RS12470 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS12470 PF00550 Phosphopantetheine attachment site AMIR_RS12470 PF00501 AMP-binding enzyme AMIR_RS12475 PF08659 KR domain AMIR_RS12475 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS12475 PF00550 Phosphopantetheine attachment site AMIR_RS12475 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS12475 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS12475 PF00698 Acyl transferase domain AMIR_RS12480 PF00698 Acyl transferase domain AMIR_RS12480 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS12480 PF14765 Polyketide synthase dehydratase AMIR_RS12480 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS12480 PF08659 KR domain AMIR_RS12480 PF00550 Phosphopantetheine attachment site AMIR_RS12480 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS12485 PF00550 Phosphopantetheine attachment site AMIR_RS12490 PF00561 alpha/beta hydrolase fold AMIR_RS12495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS12500 PF00664 ABC transporter transmembrane region AMIR_RS12500 PF00005 ABC transporter AMIR_RS12525 PF03795 YCII-related domain AMIR_RS12530 PF08281 Sigma-70, region 4 AMIR_RS12530 PF04542 Sigma-70 region 2 AMIR_RS12540 PF00171 Aldehyde dehydrogenase family AMIR_RS12570 PF07728 AAA domain (dynein-related subfamily) AMIR_RS12575 PF05762 VWA domain containing CoxE-like protein AMIR_RS12590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMIR_RS12590 PF12833 Helix-turn-helix domain AMIR_RS12600 PF06628 Catalase-related immune-responsive AMIR_RS12600 PF00199 Catalase AMIR_RS12600 PF18011 C-terminal domain found in long catalases AMIR_RS12610 PF02567 Phenazine biosynthesis-like protein AMIR_RS12625 PF03704 Bacterial transcriptional activator domain AMIR_RS12625 PF00931 NB-ARC domain AMIR_RS12625 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS12630 PF07690 Major Facilitator Superfamily AMIR_RS12640 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12640 PF17754 MftR C-terminal domain AMIR_RS12650 PF13411 MerR HTH family regulatory protein AMIR_RS12665 PF16918 Protein kinase G tetratricopeptide repeat AMIR_RS12665 PF00069 Protein kinase domain AMIR_RS12665 PF16919 Protein kinase G rubredoxin domain AMIR_RS12680 PF01547 Bacterial extracellular solute-binding protein AMIR_RS12685 PF00067 Cytochrome P450 AMIR_RS12690 PF00106 short chain dehydrogenase AMIR_RS12695 PF07690 Major Facilitator Superfamily AMIR_RS12705 PF00270 DEAD/DEAH box helicase AMIR_RS12705 PF00271 Helicase conserved C-terminal domain AMIR_RS12705 PF08148 DSHCT (NUC185) domain AMIR_RS12745 PF00873 AcrB/AcrD/AcrF family AMIR_RS12760 PF07690 Major Facilitator Superfamily AMIR_RS12770 PF02628 Cytochrome oxidase assembly protein AMIR_RS12790 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12795 PF00106 short chain dehydrogenase AMIR_RS12820 PF03211 Pectate lyase AMIR_RS12825 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMIR_RS12830 PF01168 Alanine racemase, N-terminal domain AMIR_RS12830 PF14031 Putative serine dehydratase domain AMIR_RS12845 PF05401 Nodulation protein S (NodS) AMIR_RS12860 PF03211 Pectate lyase AMIR_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12880 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIR_RS12885 PF01301 Glycosyl hydrolases family 35 AMIR_RS12890 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS12900 PF08281 Sigma-70, region 4 AMIR_RS12900 PF04542 Sigma-70 region 2 AMIR_RS12935 PF00331 Glycosyl hydrolase family 10 AMIR_RS12935 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS12950 PF02909 Tetracyclin repressor-like, C-terminal domain AMIR_RS12950 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12970 PF01661 Macro domain AMIR_RS12975 PF01323 DSBA-like thioredoxin domain AMIR_RS12980 PF07690 Major Facilitator Superfamily AMIR_RS13010 PF09594 Glycosyltransferase family 87 AMIR_RS13035 PF08361 MAATS-type transcriptional repressor, C-terminal region AMIR_RS13035 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIR_RS13045 PF05368 NmrA-like family AMIR_RS13060 PF00067 Cytochrome P450 AMIR_RS13070 PF00005 ABC transporter AMIR_RS13090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS13095 PF01156 Inosine-uridine preferring nucleoside hydrolase AMIR_RS13100 PF07690 Major Facilitator Superfamily AMIR_RS13105 PF00296 Luciferase-like monooxygenase AMIR_RS13115 PF00296 Luciferase-like monooxygenase AMIR_RS13125 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS13130 PF00005 ABC transporter AMIR_RS13145 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS13145 PF00672 HAMP domain AMIR_RS13150 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS13150 PF00072 Response regulator receiver domain AMIR_RS13155 PF00571 CBS domain AMIR_RS13155 PF01595 Cyclin M transmembrane N-terminal domain AMIR_RS13155 PF03471 Transporter associated domain AMIR_RS13165 PF00107 Zinc-binding dehydrogenase AMIR_RS13165 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS13175 PF01799 [2Fe-2S] binding domain AMIR_RS13175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIR_RS13175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIR_RS13180 PF00743 Flavin-binding monooxygenase-like AMIR_RS13215 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS13215 PF00155 Aminotransferase class I and II AMIR_RS13220 PF07690 Major Facilitator Superfamily AMIR_RS13225 PF02733 Dak1 domain AMIR_RS13225 PF02734 DAK2 domain AMIR_RS13230 PF02502 Ribose/Galactose Isomerase AMIR_RS13235 PF00121 Triosephosphate isomerase AMIR_RS13240 PF01261 Xylose isomerase-like TIM barrel AMIR_RS13245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMIR_RS13245 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term AMIR_RS13265 PF00005 ABC transporter AMIR_RS13290 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS13300 PF01588 Putative tRNA binding domain AMIR_RS13300 PF09334 tRNA synthetases class I (M) AMIR_RS13305 PF02655 ATP-grasp domain AMIR_RS13305 PF00206 Lyase AMIR_RS13325 PF00999 Sodium/hydrogen exchanger family AMIR_RS13330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS13330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIR_RS13330 PF02142 MGS-like domain AMIR_RS13380 PF00005 ABC transporter AMIR_RS13390 PF00975 Thioesterase domain AMIR_RS13400 PF07690 Major Facilitator Superfamily AMIR_RS13405 PF00550 Phosphopantetheine attachment site AMIR_RS13405 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS13405 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13405 PF08659 KR domain AMIR_RS13405 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13405 PF00698 Acyl transferase domain AMIR_RS13405 PF14765 Polyketide synthase dehydratase AMIR_RS13410 PF14765 Polyketide synthase dehydratase AMIR_RS13410 PF00550 Phosphopantetheine attachment site AMIR_RS13410 PF08659 KR domain AMIR_RS13410 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13410 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13410 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS13410 PF00698 Acyl transferase domain AMIR_RS13415 PF08990 Erythronolide synthase docking AMIR_RS13415 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13415 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13415 PF08659 KR domain AMIR_RS13415 PF00698 Acyl transferase domain AMIR_RS13415 PF18369 Polyketide synthase dimerisation element domain AMIR_RS13415 PF00550 Phosphopantetheine attachment site AMIR_RS13415 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS13415 PF00975 Thioesterase domain AMIR_RS13430 PF00561 alpha/beta hydrolase fold AMIR_RS13445 PF00550 Phosphopantetheine attachment site AMIR_RS13445 PF00975 Thioesterase domain AMIR_RS13445 PF00668 Condensation domain AMIR_RS13445 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13445 PF00501 AMP-binding enzyme AMIR_RS13450 PF00550 Phosphopantetheine attachment site AMIR_RS13450 PF00668 Condensation domain AMIR_RS13450 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13450 PF00501 AMP-binding enzyme AMIR_RS13460 PF00155 Aminotransferase class I and II AMIR_RS13470 PF00067 Cytochrome P450 AMIR_RS13480 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13480 PF08659 KR domain AMIR_RS13480 PF14765 Polyketide synthase dehydratase AMIR_RS13480 PF00550 Phosphopantetheine attachment site AMIR_RS13480 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13480 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS13480 PF00698 Acyl transferase domain AMIR_RS13490 PF00005 ABC transporter AMIR_RS13500 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13500 PF00072 Response regulator receiver domain AMIR_RS13525 PF01596 O-methyltransferase AMIR_RS13540 PF01032 FecCD transport family AMIR_RS13545 PF00005 ABC transporter AMIR_RS13555 PF00753 Metallo-beta-lactamase superfamily AMIR_RS13575 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13590 PF00793 DAHP synthetase I family AMIR_RS13595 PF07690 Major Facilitator Superfamily AMIR_RS13600 PF00668 Condensation domain AMIR_RS13600 PF00501 AMP-binding enzyme AMIR_RS13600 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13600 PF00550 Phosphopantetheine attachment site AMIR_RS13605 PF00005 ABC transporter AMIR_RS13610 PF01032 FecCD transport family AMIR_RS13615 PF01032 FecCD transport family AMIR_RS13620 PF01497 Periplasmic binding protein AMIR_RS13625 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS13625 PF04954 Siderophore-interacting protein AMIR_RS13630 PF00550 Phosphopantetheine attachment site AMIR_RS13630 PF00857 Isochorismatase family AMIR_RS13635 PF00857 Isochorismatase family AMIR_RS13635 PF00550 Phosphopantetheine attachment site AMIR_RS13640 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13640 PF00501 AMP-binding enzyme AMIR_RS13645 PF00425 chorismate binding enzyme AMIR_RS13650 PF00106 short chain dehydrogenase AMIR_RS13660 PF01032 FecCD transport family AMIR_RS13665 PF00005 ABC transporter AMIR_RS13675 PF13443 Cro/C1-type HTH DNA-binding domain AMIR_RS13690 PF07730 Histidine kinase AMIR_RS13695 PF00072 Response regulator receiver domain AMIR_RS13695 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13710 PF03952 Enolase, N-terminal domain AMIR_RS13710 PF00113 Enolase, C-terminal TIM barrel domain AMIR_RS13725 PF00005 ABC transporter AMIR_RS13725 PF13732 Domain of unknown function (DUF4162) AMIR_RS13740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS13785 PF07690 Major Facilitator Superfamily AMIR_RS13795 PF13382 Adenine deaminase C-terminal domain AMIR_RS13795 PF01979 Amidohydrolase family AMIR_RS13800 PF00072 Response regulator receiver domain AMIR_RS13800 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13810 PF02687 FtsX-like permease family AMIR_RS13810 PF00005 ABC transporter AMIR_RS13810 PF12704 MacB-like periplasmic core domain AMIR_RS13835 PF00480 ROK family AMIR_RS13835 PF01047 MarR family AMIR_RS13855 PF00403 Heavy-metal-associated domain AMIR_RS13860 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AMIR_RS13860 PF05425 Copper resistance protein D AMIR_RS13875 PF04542 Sigma-70 region 2 AMIR_RS13875 PF08281 Sigma-70, region 4 AMIR_RS13880 PF13490 Putative zinc-finger AMIR_RS13885 PF00583 Acetyltransferase (GNAT) family AMIR_RS13890 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13895 PF00664 ABC transporter transmembrane region AMIR_RS13895 PF00005 ABC transporter AMIR_RS13910 PF07690 Major Facilitator Superfamily AMIR_RS13915 PF03442 Carbohydrate binding domain X2 AMIR_RS13915 PF18448 Carbohydrate binding domain AMIR_RS13915 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS13920 PF03466 LysR substrate binding domain AMIR_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS13925 PF13291 ACT domain AMIR_RS13925 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS13935 PF00171 Aldehyde dehydrogenase family AMIR_RS13950 PF04542 Sigma-70 region 2 AMIR_RS13950 PF08281 Sigma-70, region 4 AMIR_RS13955 PF03176 MMPL family AMIR_RS13975 PF03780 Asp23 family, cell envelope-related function AMIR_RS14020 PF13439 Glycosyltransferase Family 4 AMIR_RS14060 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS14060 PF00072 Response regulator receiver domain AMIR_RS14080 PF05175 Methyltransferase small domain AMIR_RS14080 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus AMIR_RS14085 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS14090 PF04055 Radical SAM superfamily AMIR_RS14090 PF13186 Iron-sulfur cluster-binding domain AMIR_RS14100 PF00534 Glycosyl transferases group 1 AMIR_RS14100 PF13579 Glycosyl transferase 4-like domain AMIR_RS14105 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS14110 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS14125 PF00005 ABC transporter AMIR_RS14135 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS14135 PF00107 Zinc-binding dehydrogenase AMIR_RS14135 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS14135 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS14135 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS14135 PF08659 KR domain AMIR_RS14135 PF00550 Phosphopantetheine attachment site AMIR_RS14135 PF14765 Polyketide synthase dehydratase AMIR_RS14135 PF00698 Acyl transferase domain AMIR_RS14155 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS14165 PF13416 Bacterial extracellular solute-binding protein AMIR_RS14170 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14175 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14190 PF04616 Glycosyl hydrolases family 43 AMIR_RS14190 PF03422 Carbohydrate binding module (family 6) AMIR_RS14195 PF07532 Bacterial Ig-like domain (group 4) AMIR_RS14200 PF00561 alpha/beta hydrolase fold AMIR_RS14210 PF00376 MerR family regulatory protein AMIR_RS14210 PF09278 MerR, DNA binding AMIR_RS14230 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS14230 PF07729 FCD domain AMIR_RS14235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS14235 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS14235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS14240 PF07687 Peptidase dimerisation domain AMIR_RS14240 PF01546 Peptidase family M20/M25/M40 AMIR_RS14245 PF00296 Luciferase-like monooxygenase AMIR_RS14255 PF05378 Hydantoinase/oxoprolinase N-terminal region AMIR_RS14255 PF01968 Hydantoinase/oxoprolinase AMIR_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14265 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14270 PF00005 ABC transporter AMIR_RS14270 PF08402 TOBE domain AMIR_RS14280 PF00106 short chain dehydrogenase AMIR_RS14295 PF07690 Major Facilitator Superfamily AMIR_RS14300 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14300 PF08362 YcdC-like protein, C-terminal region AMIR_RS14365 PF03330 Lytic transglycolase AMIR_RS14375 PF01032 FecCD transport family AMIR_RS14380 PF00005 ABC transporter AMIR_RS14395 PF01494 FAD binding domain AMIR_RS14415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMIR_RS14435 PF00893 Small Multidrug Resistance protein AMIR_RS14440 PF07690 Major Facilitator Superfamily AMIR_RS14445 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14460 PF14759 Reductase C-terminal AMIR_RS14460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS14465 PF00067 Cytochrome P450 AMIR_RS14470 PF00067 Cytochrome P450 AMIR_RS14475 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS14475 PF06722 Protein of unknown function (DUF1205) AMIR_RS14480 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS14490 PF01979 Amidohydrolase family AMIR_RS14495 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14500 PF00550 Phosphopantetheine attachment site AMIR_RS14500 PF00668 Condensation domain AMIR_RS14500 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS14500 PF00501 AMP-binding enzyme AMIR_RS14515 PF00550 Phosphopantetheine attachment site AMIR_RS14515 PF07993 Male sterility protein AMIR_RS14515 PF00668 Condensation domain AMIR_RS14515 PF00501 AMP-binding enzyme AMIR_RS14515 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS14535 PF00668 Condensation domain AMIR_RS14535 PF00550 Phosphopantetheine attachment site AMIR_RS14535 PF00501 AMP-binding enzyme AMIR_RS14535 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS14550 PF13569 Domain of unknown function (DUF4132) AMIR_RS14555 PF01590 GAF domain AMIR_RS14555 PF00360 Phytochrome region AMIR_RS14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS14555 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS14555 PF08446 PAS fold AMIR_RS14560 PF08448 PAS fold AMIR_RS14560 PF13581 Histidine kinase-like ATPase domain AMIR_RS14560 PF13466 STAS domain AMIR_RS14560 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS14565 PF00072 Response regulator receiver domain AMIR_RS14585 PF01638 HxlR-like helix-turn-helix AMIR_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14610 PF01547 Bacterial extracellular solute-binding protein AMIR_RS14620 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS14630 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14630 PF00931 NB-ARC domain AMIR_RS14630 PF03704 Bacterial transcriptional activator domain AMIR_RS14670 PF17758 Proteasomal ATPase OB N-terminal domain AMIR_RS14670 PF16450 Proteasomal ATPase OB C-terminal domain AMIR_RS14670 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS14685 PF00931 NB-ARC domain AMIR_RS14685 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14685 PF03704 Bacterial transcriptional activator domain AMIR_RS14770 PF03704 Bacterial transcriptional activator domain AMIR_RS14770 PF00931 NB-ARC domain AMIR_RS14770 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS14790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS14815 PF03120 NAD-dependent DNA ligase OB-fold domain AMIR_RS14815 PF01653 NAD-dependent DNA ligase adenylation domain AMIR_RS14815 PF12826 Helix-hairpin-helix motif AMIR_RS14825 PF00082 Subtilase family AMIR_RS14825 PF05922 Peptidase inhibitor I9 AMIR_RS14830 PF13569 Domain of unknown function (DUF4132) AMIR_RS14835 PF00155 Aminotransferase class I and II AMIR_RS14850 PF00561 alpha/beta hydrolase fold AMIR_RS14865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS14865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS14880 PF00293 NUDIX domain AMIR_RS14885 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14890 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS14915 PF01547 Bacterial extracellular solute-binding protein AMIR_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14930 PF13802 Galactose mutarotase-like AMIR_RS14930 PF01055 Glycosyl hydrolases family 31 AMIR_RS14940 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS14970 PF13649 Methyltransferase domain AMIR_RS14985 PF00561 alpha/beta hydrolase fold AMIR_RS14990 PF04978 Protein of unknown function (DUF664) AMIR_RS15010 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS15010 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15020 PF13411 MerR HTH family regulatory protein AMIR_RS15025 PF00072 Response regulator receiver domain AMIR_RS15025 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS15035 PF00005 ABC transporter AMIR_RS15035 PF12704 MacB-like periplasmic core domain AMIR_RS15035 PF02687 FtsX-like permease family AMIR_RS15040 PF12704 MacB-like periplasmic core domain AMIR_RS15040 PF02687 FtsX-like permease family AMIR_RS15040 PF00005 ABC transporter AMIR_RS15050 PF00128 Alpha amylase, catalytic domain AMIR_RS15065 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15065 PF02909 Tetracyclin repressor-like, C-terminal domain AMIR_RS15085 PF04954 Siderophore-interacting protein AMIR_RS15085 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS15095 PF02567 Phenazine biosynthesis-like protein AMIR_RS15105 PF03358 NADPH-dependent FMN reductase AMIR_RS15110 PF13569 Domain of unknown function (DUF4132) AMIR_RS15120 PF00459 Inositol monophosphatase family AMIR_RS15125 PF00005 ABC transporter AMIR_RS15125 PF00664 ABC transporter transmembrane region AMIR_RS15130 PF00664 ABC transporter transmembrane region AMIR_RS15130 PF00005 ABC transporter AMIR_RS15180 PF02589 LUD domain AMIR_RS15185 PF11870 Domain of unknown function (DUF3390) AMIR_RS15185 PF13183 4Fe-4S dicluster domain AMIR_RS15185 PF02589 LUD domain AMIR_RS15190 PF02754 Cysteine-rich domain AMIR_RS15195 PF07702 UTRA domain AMIR_RS15195 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS15205 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS15210 PF00005 ABC transporter AMIR_RS15215 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS15220 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS15235 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS15240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS15240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS15250 PF01979 Amidohydrolase family AMIR_RS15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15260 PF03466 LysR substrate binding domain AMIR_RS15270 PF05231 MASE1 AMIR_RS15270 PF07730 Histidine kinase AMIR_RS15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS15280 PF04542 Sigma-70 region 2 AMIR_RS15280 PF08281 Sigma-70, region 4 AMIR_RS15290 PF02656 Domain of unknown function (DUF202) AMIR_RS15295 PF00067 Cytochrome P450 AMIR_RS15310 PF01126 Heme oxygenase AMIR_RS15330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS15340 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS15345 PF00005 ABC transporter AMIR_RS15345 PF09383 NIL domain AMIR_RS15350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS15350 PF00005 ABC transporter AMIR_RS15355 PF13537 Glutamine amidotransferase domain AMIR_RS15355 PF00733 Asparagine synthase AMIR_RS15370 PF00893 Small Multidrug Resistance protein AMIR_RS15375 PF00202 Aminotransferase class-III AMIR_RS15380 PF00202 Aminotransferase class-III AMIR_RS15385 PF00171 Aldehyde dehydrogenase family AMIR_RS15390 PF01717 Cobalamin-independent synthase, Catalytic domain AMIR_RS15390 PF08267 Cobalamin-independent synthase, N-terminal domain AMIR_RS15395 PF00891 O-methyltransferase domain AMIR_RS15430 PF13340 Putative transposase of IS4/5 family (DUF4096) AMIR_RS15445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS15445 PF00672 HAMP domain AMIR_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15450 PF03466 LysR substrate binding domain AMIR_RS15455 PF00892 EamA-like transporter family AMIR_RS15465 PF07690 Major Facilitator Superfamily AMIR_RS15475 PF01022 Bacterial regulatory protein, arsR family AMIR_RS15490 PF00480 ROK family AMIR_RS15505 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS15505 PF05221 S-adenosyl-L-homocysteine hydrolase AMIR_RS15510 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMIR_RS15510 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMIR_RS15510 PF02772 S-adenosylmethionine synthetase, central domain AMIR_RS15525 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIR_RS15525 PF16499 Alpha galactosidase A AMIR_RS15535 PF00657 GDSL-like Lipase/Acylhydrolase AMIR_RS15535 PF00404 Dockerin type I domain AMIR_RS15545 PF00155 Aminotransferase class I and II AMIR_RS15585 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMIR_RS15590 PF00296 Luciferase-like monooxygenase AMIR_RS15620 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding AMIR_RS15620 PF01565 FAD binding domain AMIR_RS15625 PF00248 Aldo/keto reductase family AMIR_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15630 PF03466 LysR substrate binding domain AMIR_RS15645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS15645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIR_RS15650 PF00067 Cytochrome P450 AMIR_RS15655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS15655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIR_RS15660 PF00202 Aminotransferase class-III AMIR_RS15695 PF01791 DeoC/LacD family aldolase AMIR_RS15700 PF00107 Zinc-binding dehydrogenase AMIR_RS15700 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15710 PF00916 Sulfate permease family AMIR_RS15710 PF01740 STAS domain AMIR_RS15720 PF00067 Cytochrome P450 AMIR_RS15730 PF01965 DJ-1/PfpI family AMIR_RS15750 PF00149 Calcineurin-like phosphoesterase AMIR_RS15775 PF00317 Ribonucleotide reductase, all-alpha domain AMIR_RS15775 PF03477 ATP cone domain AMIR_RS15775 PF02867 Ribonucleotide reductase, barrel domain AMIR_RS15780 PF00268 Ribonucleotide reductase, small chain AMIR_RS15785 PF03358 NADPH-dependent FMN reductase AMIR_RS15785 PF01566 Natural resistance-associated macrophage protein AMIR_RS15790 PF06114 IrrE N-terminal-like domain AMIR_RS15800 PF03176 MMPL family AMIR_RS15815 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS15845 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15845 PF00698 Acyl transferase domain AMIR_RS15845 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS15845 PF14765 Polyketide synthase dehydratase AMIR_RS15845 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15845 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15845 PF08659 KR domain AMIR_RS15845 PF08990 Erythronolide synthase docking AMIR_RS15845 PF00550 Phosphopantetheine attachment site AMIR_RS15850 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15860 PF00664 ABC transporter transmembrane region AMIR_RS15860 PF00005 ABC transporter AMIR_RS15865 PF00999 Sodium/hydrogen exchanger family AMIR_RS15885 PF00698 Acyl transferase domain AMIR_RS15885 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15885 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS15885 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15885 PF08659 KR domain AMIR_RS15885 PF18369 Polyketide synthase dimerisation element domain AMIR_RS15885 PF00550 Phosphopantetheine attachment site AMIR_RS15885 PF08990 Erythronolide synthase docking AMIR_RS15885 PF00975 Thioesterase domain AMIR_RS15890 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15890 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15890 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS15890 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15890 PF00698 Acyl transferase domain AMIR_RS15890 PF08659 KR domain AMIR_RS15890 PF14765 Polyketide synthase dehydratase AMIR_RS15890 PF00550 Phosphopantetheine attachment site AMIR_RS15895 PF00797 N-acetyltransferase AMIR_RS15900 PF04072 Leucine carboxyl methyltransferase AMIR_RS15905 PF01494 FAD binding domain AMIR_RS15910 PF04820 Tryptophan halogenase AMIR_RS15915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS15915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS15920 PF00550 Phosphopantetheine attachment site AMIR_RS15925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS15925 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS15925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS15935 PF01596 O-methyltransferase AMIR_RS15945 PF01757 Acyltransferase family AMIR_RS15950 PF03795 YCII-related domain AMIR_RS15955 PF16861 Carbamoyltransferase C-terminus AMIR_RS15955 PF02543 Carbamoyltransferase N-terminus AMIR_RS15965 PF01220 Dehydroquinase class II AMIR_RS15970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS15980 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS15980 PF00698 Acyl transferase domain AMIR_RS15980 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15980 PF14765 Polyketide synthase dehydratase AMIR_RS15980 PF00550 Phosphopantetheine attachment site AMIR_RS15980 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15980 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15980 PF08659 KR domain AMIR_RS15985 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS15985 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15985 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15985 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15985 PF08659 KR domain AMIR_RS15985 PF14765 Polyketide synthase dehydratase AMIR_RS15985 PF00698 Acyl transferase domain AMIR_RS15985 PF00550 Phosphopantetheine attachment site AMIR_RS15995 PF00106 short chain dehydrogenase AMIR_RS16010 PF00067 Cytochrome P450 AMIR_RS16010 PF00175 Oxidoreductase NAD-binding domain AMIR_RS16010 PF00667 FAD binding domain AMIR_RS16010 PF00258 Flavodoxin AMIR_RS16015 PF00175 Oxidoreductase NAD-binding domain AMIR_RS16015 PF00067 Cytochrome P450 AMIR_RS16015 PF00258 Flavodoxin AMIR_RS16015 PF00667 FAD binding domain AMIR_RS16020 PF04545 Sigma-70, region 4 AMIR_RS16020 PF04539 Sigma-70 region 3 AMIR_RS16020 PF04542 Sigma-70 region 2 AMIR_RS16020 PF00140 Sigma-70 factor, region 1.2 AMIR_RS16030 PF06965 Na+/H+ antiporter 1 AMIR_RS16035 PF06965 Na+/H+ antiporter 1 AMIR_RS16065 PF04616 Glycosyl hydrolases family 43 AMIR_RS16065 PF03422 Carbohydrate binding module (family 6) AMIR_RS16070 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS16070 PF00331 Glycosyl hydrolase family 10 AMIR_RS16075 PF00553 Cellulose binding domain AMIR_RS16075 PF01341 Glycosyl hydrolases family 6 AMIR_RS16080 PF00553 Cellulose binding domain AMIR_RS16080 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS16080 PF00041 Fibronectin type III domain AMIR_RS16090 PF07730 Histidine kinase AMIR_RS16095 PF00072 Response regulator receiver domain AMIR_RS16095 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16110 PF00553 Cellulose binding domain AMIR_RS16110 PF01341 Glycosyl hydrolases family 6 AMIR_RS16120 PF09594 Glycosyltransferase family 87 AMIR_RS16130 PF00248 Aldo/keto reductase family AMIR_RS16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS16140 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS16140 PF13493 Domain of unknown function (DUF4118) AMIR_RS16140 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIR_RS16140 PF00582 Universal stress protein family AMIR_RS16145 PF02669 K+-transporting ATPase, c chain AMIR_RS16155 PF03814 Potassium-transporting ATPase A subunit AMIR_RS16170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS16170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS16355 PF08241 Methyltransferase domain AMIR_RS16360 PF08241 Methyltransferase domain AMIR_RS16365 PF00067 Cytochrome P450 AMIR_RS16370 PF00067 Cytochrome P450 AMIR_RS16375 PF01596 O-methyltransferase AMIR_RS16380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS16380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS16385 PF00550 Phosphopantetheine attachment site AMIR_RS16390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS16390 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS16390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS16400 PF16861 Carbamoyltransferase C-terminus AMIR_RS16400 PF02543 Carbamoyltransferase N-terminus AMIR_RS16410 PF00480 ROK family AMIR_RS16415 PF01220 Dehydroquinase class II AMIR_RS16420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS16425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS16425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS16430 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS16435 PF01494 FAD binding domain AMIR_RS16440 PF00797 N-acetyltransferase AMIR_RS16445 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16445 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS16445 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16445 PF00698 Acyl transferase domain AMIR_RS16445 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16445 PF08659 KR domain AMIR_RS16445 PF14765 Polyketide synthase dehydratase AMIR_RS16445 PF00550 Phosphopantetheine attachment site AMIR_RS16450 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16450 PF00975 Thioesterase domain AMIR_RS16450 PF08990 Erythronolide synthase docking AMIR_RS16450 PF08659 KR domain AMIR_RS16450 PF00698 Acyl transferase domain AMIR_RS16450 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS16450 PF00550 Phosphopantetheine attachment site AMIR_RS16450 PF18369 Polyketide synthase dimerisation element domain AMIR_RS16450 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16455 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16455 PF00698 Acyl transferase domain AMIR_RS16455 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS16455 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16455 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16455 PF00550 Phosphopantetheine attachment site AMIR_RS16455 PF14765 Polyketide synthase dehydratase AMIR_RS16455 PF08659 KR domain AMIR_RS16465 PF01761 3-dehydroquinate synthase AMIR_RS16470 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16490 PF03664 Glycosyl hydrolase family 62 AMIR_RS16490 PF00553 Cellulose binding domain AMIR_RS16490 PF03422 Carbohydrate binding module (family 6) AMIR_RS16500 PF01341 Glycosyl hydrolases family 6 AMIR_RS16500 PF00553 Cellulose binding domain AMIR_RS16505 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16520 PF00857 Isochorismatase family AMIR_RS16525 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16540 PF00106 short chain dehydrogenase AMIR_RS16555 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16555 PF00072 Response regulator receiver domain AMIR_RS16560 PF07730 Histidine kinase AMIR_RS16565 PF00561 alpha/beta hydrolase fold AMIR_RS16575 PF12146 Serine aminopeptidase, S33 AMIR_RS16575 PF13026 Protein of unknown function (DUF3887) AMIR_RS16590 PF08406 CbbQ/NirQ/NorQ C-terminal AMIR_RS16590 PF07728 AAA domain (dynein-related subfamily) AMIR_RS16640 PF12833 Helix-turn-helix domain AMIR_RS16655 PF00106 short chain dehydrogenase AMIR_RS16660 PF18448 Carbohydrate binding domain AMIR_RS16660 PF03442 Carbohydrate binding domain X2 AMIR_RS16660 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS16680 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16690 PF01638 HxlR-like helix-turn-helix AMIR_RS16705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS16705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS16715 PF00561 alpha/beta hydrolase fold AMIR_RS16740 PF00106 short chain dehydrogenase AMIR_RS16745 PF04226 Transglycosylase associated protein AMIR_RS16750 PF00135 Carboxylesterase family AMIR_RS16755 PF10996 Beta-Casp domain AMIR_RS16755 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMIR_RS16755 PF00753 Metallo-beta-lactamase superfamily AMIR_RS16770 PF07730 Histidine kinase AMIR_RS16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS16770 PF05231 MASE1 AMIR_RS16785 PF00107 Zinc-binding dehydrogenase AMIR_RS16785 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16800 PF01872 RibD C-terminal domain AMIR_RS16805 PF00248 Aldo/keto reductase family AMIR_RS16810 PF12852 Cupin AMIR_RS16810 PF12833 Helix-turn-helix domain AMIR_RS16820 PF09363 XFP C-terminal domain AMIR_RS16820 PF09364 XFP N-terminal domain AMIR_RS16820 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMIR_RS16825 PF00871 Acetokinase family AMIR_RS16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS16855 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS16875 PF03466 LysR substrate binding domain AMIR_RS16885 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16890 PF01593 Flavin containing amine oxidoreductase AMIR_RS16895 PF05378 Hydantoinase/oxoprolinase N-terminal region AMIR_RS16895 PF01968 Hydantoinase/oxoprolinase AMIR_RS16915 PF02525 Flavodoxin-like fold AMIR_RS16940 PF09924 Uncharacterised conserved protein (DUF2156) AMIR_RS16945 PF00756 Putative esterase AMIR_RS16955 PF01979 Amidohydrolase family AMIR_RS16960 PF03061 Thioesterase superfamily AMIR_RS16980 PF00535 Glycosyl transferase family 2 AMIR_RS16985 PF13397 RNA polymerase-binding protein AMIR_RS17010 PF00265 Thymidine kinase AMIR_RS17025 PF11700 Vacuole effluxer Atg22 like AMIR_RS17040 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS17040 PF08448 PAS fold AMIR_RS17055 PF02735 Ku70/Ku80 beta-barrel domain AMIR_RS17075 PF01145 SPFH domain / Band 7 family AMIR_RS17085 PF01022 Bacterial regulatory protein, arsR family AMIR_RS17090 PF01758 Sodium Bile acid symporter family AMIR_RS17095 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIR_RS17110 PF01425 Amidase AMIR_RS17150 PF00557 Metallopeptidase family M24 AMIR_RS17160 PF02082 Transcriptional regulator AMIR_RS17165 PF01494 FAD binding domain AMIR_RS17170 PF08220 DeoR-like helix-turn-helix domain AMIR_RS17170 PF00455 DeoR C terminal sensor domain AMIR_RS17175 PF00293 NUDIX domain AMIR_RS17185 PF00929 Exonuclease AMIR_RS17195 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS17195 PF00589 Phage integrase family AMIR_RS17230 PF17676 LD-carboxypeptidase C-terminal domain AMIR_RS17230 PF02016 LD-carboxypeptidase N-terminal domain AMIR_RS17250 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS17260 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS17270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS17270 PF00005 ABC transporter AMIR_RS17275 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17275 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS17280 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS17295 PF07687 Peptidase dimerisation domain AMIR_RS17295 PF01546 Peptidase family M20/M25/M40 AMIR_RS17305 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS17320 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17325 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17330 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS17330 PF00589 Phage integrase family AMIR_RS17345 PF01476 LysM domain AMIR_RS17345 PF00756 Putative esterase AMIR_RS17390 PF00248 Aldo/keto reductase family AMIR_RS17405 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS17405 PF00107 Zinc-binding dehydrogenase AMIR_RS17415 PF00293 NUDIX domain AMIR_RS17430 PF17996 Carbohydrate esterase 2 N-terminal AMIR_RS17430 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS17465 PF00149 Calcineurin-like phosphoesterase AMIR_RS17475 PF01494 FAD binding domain AMIR_RS17485 PF00149 Calcineurin-like phosphoesterase AMIR_RS17495 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS17500 PF00069 Protein kinase domain AMIR_RS17500 PF16918 Protein kinase G tetratricopeptide repeat AMIR_RS17500 PF16919 Protein kinase G rubredoxin domain AMIR_RS17510 PF01047 MarR family AMIR_RS17535 PF00107 Zinc-binding dehydrogenase AMIR_RS17535 PF16884 N-terminal domain of oxidoreductase AMIR_RS17540 PF14525 AraC-binding-like domain AMIR_RS17540 PF12833 Helix-turn-helix domain AMIR_RS17545 PF00271 Helicase conserved C-terminal domain AMIR_RS17545 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMIR_RS17545 PF00270 DEAD/DEAH box helicase AMIR_RS17545 PF04408 Helicase associated domain (HA2) AMIR_RS17545 PF11898 Domain of unknown function (DUF3418) AMIR_RS17565 PF02673 Bacitracin resistance protein BacA AMIR_RS17570 PF00296 Luciferase-like monooxygenase AMIR_RS17575 PF00248 Aldo/keto reductase family AMIR_RS17610 PF17760 UvrA interaction domain AMIR_RS17610 PF00005 ABC transporter AMIR_RS17610 PF17755 UvrA DNA-binding domain AMIR_RS17625 PF01614 Bacterial transcriptional regulator AMIR_RS17625 PF09339 IclR helix-turn-helix domain AMIR_RS17635 PF00553 Cellulose binding domain AMIR_RS17635 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS17670 PF09335 SNARE associated Golgi protein AMIR_RS17690 PF07690 Major Facilitator Superfamily AMIR_RS17710 PF05922 Peptidase inhibitor I9 AMIR_RS17710 PF00082 Subtilase family AMIR_RS17720 PF00550 Phosphopantetheine attachment site AMIR_RS17720 PF00501 AMP-binding enzyme AMIR_RS17720 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17740 PF04542 Sigma-70 region 2 AMIR_RS17740 PF08281 Sigma-70, region 4 AMIR_RS17745 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS17745 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS17750 PF00296 Luciferase-like monooxygenase AMIR_RS17765 PF00082 Subtilase family AMIR_RS17765 PF05922 Peptidase inhibitor I9 AMIR_RS17770 PF17926 Tetracyclin repressor-like, C-terminal domain AMIR_RS17770 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17775 PF00248 Aldo/keto reductase family AMIR_RS17780 PF07859 alpha/beta hydrolase fold AMIR_RS17785 PF17668 Acetyltransferase (GNAT) domain AMIR_RS17785 PF13530 Sterol carrier protein domain AMIR_RS17790 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMIR_RS17790 PF04616 Glycosyl hydrolases family 43 AMIR_RS17800 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS17800 PF00931 NB-ARC domain AMIR_RS17800 PF03704 Bacterial transcriptional activator domain AMIR_RS17815 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS17815 PF00072 Response regulator receiver domain AMIR_RS17820 PF07690 Major Facilitator Superfamily AMIR_RS17825 PF00067 Cytochrome P450 AMIR_RS17830 PF00668 Condensation domain AMIR_RS17830 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17830 PF00550 Phosphopantetheine attachment site AMIR_RS17830 PF00501 AMP-binding enzyme AMIR_RS17835 PF00975 Thioesterase domain AMIR_RS17835 PF00501 AMP-binding enzyme AMIR_RS17835 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17835 PF00668 Condensation domain AMIR_RS17835 PF00550 Phosphopantetheine attachment site AMIR_RS17840 PF03621 MbtH-like protein AMIR_RS17850 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17850 PF00501 AMP-binding enzyme AMIR_RS17850 PF00668 Condensation domain AMIR_RS17850 PF00550 Phosphopantetheine attachment site AMIR_RS17855 PF13291 ACT domain AMIR_RS17855 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS17860 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS17860 PF00698 Acyl transferase domain AMIR_RS17860 PF00550 Phosphopantetheine attachment site AMIR_RS17860 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS17860 PF14765 Polyketide synthase dehydratase AMIR_RS17860 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS17860 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS17860 PF08659 KR domain AMIR_RS17885 PF01891 Cobalt uptake substrate-specific transmembrane region AMIR_RS17890 PF02553 Cobalt transport protein component CbiN AMIR_RS17900 PF00005 ABC transporter AMIR_RS17915 PF17853 GGDEF-like domain AMIR_RS17915 PF06018 CodY GAF-like domain AMIR_RS17915 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS17920 PF01266 FAD dependent oxidoreductase AMIR_RS17925 PF03449 Transcription elongation factor, N-terminal AMIR_RS17925 PF01272 Transcription elongation factor, GreA/GreB, C-term AMIR_RS17940 PF00067 Cytochrome P450 AMIR_RS17945 PF03621 MbtH-like protein AMIR_RS17950 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17950 PF00501 AMP-binding enzyme AMIR_RS17950 PF00668 Condensation domain AMIR_RS17950 PF00550 Phosphopantetheine attachment site AMIR_RS17970 PF13466 STAS domain AMIR_RS17970 PF08448 PAS fold AMIR_RS17970 PF13581 Histidine kinase-like ATPase domain AMIR_RS17970 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS18000 PF00005 ABC transporter AMIR_RS18005 PF05199 GMC oxidoreductase AMIR_RS18015 PF00202 Aminotransferase class-III AMIR_RS18020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS18025 PF00171 Aldehyde dehydrogenase family AMIR_RS18045 PF00171 Aldehyde dehydrogenase family AMIR_RS18055 PF00501 AMP-binding enzyme AMIR_RS18060 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS18060 PF12464 Maltose acetyltransferase AMIR_RS18065 PF03466 LysR substrate binding domain AMIR_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS18090 PF08241 Methyltransferase domain AMIR_RS18105 PF03796 DnaB-like helicase C terminal domain AMIR_RS18105 PF03796 DnaB-like helicase C terminal domain AMIR_RS18105 PF00772 DnaB-like helicase N terminal domain AMIR_RS18105 PF14528 LAGLIDADG-like domain AMIR_RS18105 PF14528 LAGLIDADG-like domain AMIR_RS18105 PF00772 DnaB-like helicase N terminal domain AMIR_RS18160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMIR_RS18160 PF09397 Ftsk gamma domain AMIR_RS18160 PF01580 FtsK/SpoIIIE family AMIR_RS18160 PF17854 FtsK alpha domain AMIR_RS18205 PF00248 Aldo/keto reductase family AMIR_RS18245 PF00067 Cytochrome P450 AMIR_RS18260 PF00107 Zinc-binding dehydrogenase AMIR_RS18260 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS18275 PF00664 ABC transporter transmembrane region AMIR_RS18275 PF00005 ABC transporter AMIR_RS18285 PF00294 pfkB family carbohydrate kinase AMIR_RS18285 PF01467 Cytidylyltransferase-like AMIR_RS18290 PF16861 Carbamoyltransferase C-terminus AMIR_RS18290 PF02543 Carbamoyltransferase N-terminus AMIR_RS18300 PF03621 MbtH-like protein AMIR_RS18310 PF00550 Phosphopantetheine attachment site AMIR_RS18310 PF00668 Condensation domain AMIR_RS18310 PF00501 AMP-binding enzyme AMIR_RS18310 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18315 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18315 PF00550 Phosphopantetheine attachment site AMIR_RS18315 PF00668 Condensation domain AMIR_RS18315 PF00501 AMP-binding enzyme AMIR_RS18320 PF00733 Asparagine synthase AMIR_RS18320 PF13537 Glutamine amidotransferase domain AMIR_RS18330 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS18335 PF00668 Condensation domain AMIR_RS18335 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18335 PF00668 Condensation domain AMIR_RS18335 PF00550 Phosphopantetheine attachment site AMIR_RS18335 PF00550 Phosphopantetheine attachment site AMIR_RS18335 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18335 PF00501 AMP-binding enzyme AMIR_RS18335 PF00501 AMP-binding enzyme AMIR_RS18345 PF00501 AMP-binding enzyme AMIR_RS18345 PF00550 Phosphopantetheine attachment site AMIR_RS18345 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18345 PF00668 Condensation domain AMIR_RS18350 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS18350 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS18350 PF00550 Phosphopantetheine attachment site AMIR_RS18350 PF00668 Condensation domain AMIR_RS18350 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS18350 PF00698 Acyl transferase domain AMIR_RS18355 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18355 PF00501 AMP-binding enzyme AMIR_RS18355 PF00550 Phosphopantetheine attachment site AMIR_RS18355 PF00668 Condensation domain AMIR_RS18360 PF00668 Condensation domain AMIR_RS18360 PF00501 AMP-binding enzyme AMIR_RS18360 PF00550 Phosphopantetheine attachment site AMIR_RS18360 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18365 PF01804 Penicillin amidase AMIR_RS18375 PF01638 HxlR-like helix-turn-helix AMIR_RS18400 PF00067 Cytochrome P450 AMIR_RS18415 PF00664 ABC transporter transmembrane region AMIR_RS18415 PF00005 ABC transporter AMIR_RS18420 PF00072 Response regulator receiver domain AMIR_RS18420 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS18425 PF13185 GAF domain AMIR_RS18425 PF07730 Histidine kinase AMIR_RS18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18430 PF00144 Beta-lactamase AMIR_RS18435 PF01494 FAD binding domain AMIR_RS18440 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18440 PF08361 MAATS-type transcriptional repressor, C-terminal region AMIR_RS18450 PF01970 Tripartite tricarboxylate transporter TctA family AMIR_RS18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18465 PF00989 PAS fold AMIR_RS18465 PF17203 Single cache domain 3 AMIR_RS18465 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMIR_RS18470 PF08769 Sporulation initiation factor Spo0A C terminal AMIR_RS18470 PF00072 Response regulator receiver domain AMIR_RS18480 PF00128 Alpha amylase, catalytic domain AMIR_RS18480 PF16657 Maltogenic Amylase, C-terminal domain AMIR_RS18485 PF00296 Luciferase-like monooxygenase AMIR_RS18495 PF17932 Tetracyclin repressor-like, C-terminal domain AMIR_RS18495 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18515 PF04186 FxsA cytoplasmic membrane protein AMIR_RS18520 PF12544 Lysine-2,3-aminomutase AMIR_RS18520 PF04055 Radical SAM superfamily AMIR_RS18565 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS18580 PF17755 UvrA DNA-binding domain AMIR_RS18580 PF00005 ABC transporter AMIR_RS18580 PF17760 UvrA interaction domain AMIR_RS18595 PF17042 Nucleotide-binding C-terminal domain AMIR_RS18595 PF07005 Sugar-binding N-terminal domain AMIR_RS18600 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS18605 PF08220 DeoR-like helix-turn-helix domain AMIR_RS18605 PF00455 DeoR C terminal sensor domain AMIR_RS18620 PF01699 Sodium/calcium exchanger protein AMIR_RS18625 PF08448 PAS fold AMIR_RS18625 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS18625 PF13466 STAS domain AMIR_RS18625 PF13581 Histidine kinase-like ATPase domain AMIR_RS18630 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS18630 PF00931 NB-ARC domain AMIR_RS18630 PF03704 Bacterial transcriptional activator domain AMIR_RS18640 PF00072 Response regulator receiver domain AMIR_RS18645 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS18645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18645 PF00072 Response regulator receiver domain AMIR_RS18645 PF01627 Hpt domain AMIR_RS18645 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS18655 PF13581 Histidine kinase-like ATPase domain AMIR_RS18660 PF01740 STAS domain AMIR_RS18665 PF08678 Rsbr N terminal AMIR_RS18665 PF01740 STAS domain AMIR_RS18675 PF05199 GMC oxidoreductase AMIR_RS18680 PF00743 Flavin-binding monooxygenase-like AMIR_RS18685 PF12833 Helix-turn-helix domain AMIR_RS18685 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMIR_RS18695 PF04616 Glycosyl hydrolases family 43 AMIR_RS18725 PF00005 ABC transporter AMIR_RS18725 PF00664 ABC transporter transmembrane region AMIR_RS18730 PF00005 ABC transporter AMIR_RS18730 PF00664 ABC transporter transmembrane region AMIR_RS18735 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS18735 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18765 PF13411 MerR HTH family regulatory protein AMIR_RS18780 PF00069 Protein kinase domain AMIR_RS18780 PF03793 PASTA domain AMIR_RS18785 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS18785 PF00107 Zinc-binding dehydrogenase AMIR_RS18790 PF00753 Metallo-beta-lactamase superfamily AMIR_RS18805 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIR_RS18840 PF04829 Pre-toxin domain with VENN motif AMIR_RS18840 PF05594 Haemagluttinin repeat AMIR_RS18840 PF13332 Hemagglutinin repeat AMIR_RS18920 PF00709 Adenylosuccinate synthetase AMIR_RS18930 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIR_RS18930 PF16499 Alpha galactosidase A AMIR_RS18940 PF00082 Subtilase family AMIR_RS18940 PF05922 Peptidase inhibitor I9 AMIR_RS18945 PF01638 HxlR-like helix-turn-helix AMIR_RS18950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS18950 PF02779 Transketolase, pyrimidine binding domain AMIR_RS18950 PF02780 Transketolase, C-terminal domain AMIR_RS18965 PF02082 Transcriptional regulator AMIR_RS18970 PF00042 Globin AMIR_RS18970 PF00970 Oxidoreductase FAD-binding domain AMIR_RS18970 PF00175 Oxidoreductase NAD-binding domain AMIR_RS18990 PF01593 Flavin containing amine oxidoreductase AMIR_RS18995 PF00348 Polyprenyl synthetase AMIR_RS19035 PF01494 FAD binding domain AMIR_RS19040 PF00248 Aldo/keto reductase family AMIR_RS19060 PF01594 AI-2E family transporter AMIR_RS19075 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS19080 PF00501 AMP-binding enzyme AMIR_RS19080 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19090 PF01728 FtsJ-like methyltransferase AMIR_RS19095 PF00501 AMP-binding enzyme AMIR_RS19095 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19095 PF16177 Acetyl-coenzyme A synthetase N-terminus AMIR_RS19100 PF01593 Flavin containing amine oxidoreductase AMIR_RS19115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS19120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS19135 PF01546 Peptidase family M20/M25/M40 AMIR_RS19145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS19145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS19155 PF13499 EF-hand domain pair AMIR_RS19160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIR_RS19160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIR_RS19160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIR_RS19175 PF17754 MftR C-terminal domain AMIR_RS19175 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19190 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMIR_RS19190 PF07971 Glycosyl hydrolase family 92 AMIR_RS19200 PF12697 Alpha/beta hydrolase family AMIR_RS19225 PF07690 Major Facilitator Superfamily AMIR_RS19230 PF01252 Signal peptidase (SPase) II AMIR_RS19260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AMIR_RS19285 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS19295 PF00072 Response regulator receiver domain AMIR_RS19295 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS19310 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS19310 PF00589 Phage integrase family AMIR_RS19365 PF01526 Tn3 transposase DDE domain AMIR_RS19370 PF00106 short chain dehydrogenase AMIR_RS19385 PF00668 Condensation domain AMIR_RS19385 PF00501 AMP-binding enzyme AMIR_RS19385 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19385 PF00550 Phosphopantetheine attachment site AMIR_RS19390 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19390 PF00668 Condensation domain AMIR_RS19390 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS19390 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS19390 PF08659 KR domain AMIR_RS19390 PF00550 Phosphopantetheine attachment site AMIR_RS19390 PF14765 Polyketide synthase dehydratase AMIR_RS19390 PF00501 AMP-binding enzyme AMIR_RS19390 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS19395 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS19400 PF00067 Cytochrome P450 AMIR_RS19415 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS19425 PF13460 NAD(P)H-binding AMIR_RS19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS19430 PF03466 LysR substrate binding domain AMIR_RS19445 PF00550 Phosphopantetheine attachment site AMIR_RS19445 PF08659 KR domain AMIR_RS19445 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS19445 PF14765 Polyketide synthase dehydratase AMIR_RS19445 PF00698 Acyl transferase domain AMIR_RS19465 PF00704 Glycosyl hydrolases family 18 AMIR_RS19475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMIR_RS19480 PF01032 FecCD transport family AMIR_RS19495 PF00005 ABC transporter AMIR_RS19500 PF01032 FecCD transport family AMIR_RS19515 PF10100 Staphylopine dehydrogenase AMIR_RS19545 PF02543 Carbamoyltransferase N-terminus AMIR_RS19545 PF16861 Carbamoyltransferase C-terminus AMIR_RS19555 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AMIR_RS19555 PF04616 Glycosyl hydrolases family 43 AMIR_RS19565 PF13340 Putative transposase of IS4/5 family (DUF4096) AMIR_RS19575 PF01266 FAD dependent oxidoreductase AMIR_RS19580 PF00248 Aldo/keto reductase family AMIR_RS19590 PF16861 Carbamoyltransferase C-terminus AMIR_RS19590 PF02543 Carbamoyltransferase N-terminus AMIR_RS19595 PF08241 Methyltransferase domain AMIR_RS19605 PF00561 alpha/beta hydrolase fold AMIR_RS19615 PF01323 DSBA-like thioredoxin domain AMIR_RS19630 PF01022 Bacterial regulatory protein, arsR family AMIR_RS19645 PF04616 Glycosyl hydrolases family 43 AMIR_RS19650 PF00248 Aldo/keto reductase family AMIR_RS19660 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS19660 PF00072 Response regulator receiver domain AMIR_RS19665 PF07690 Major Facilitator Superfamily AMIR_RS19670 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19695 PF00072 Response regulator receiver domain AMIR_RS19695 PF13426 PAS domain AMIR_RS19695 PF08448 PAS fold AMIR_RS19695 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS19695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS19715 PF00544 Pectate lyase AMIR_RS19720 PF10503 Esterase PHB depolymerase AMIR_RS19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS19745 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS19745 PF00107 Zinc-binding dehydrogenase AMIR_RS19785 PF01494 FAD binding domain AMIR_RS19795 PF01726 LexA DNA binding domain AMIR_RS19795 PF00717 Peptidase S24-like AMIR_RS19800 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19820 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19825 PF00925 GTP cyclohydrolase II AMIR_RS19835 PF01872 RibD C-terminal domain AMIR_RS19835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS19840 PF01546 Peptidase family M20/M25/M40 AMIR_RS19840 PF07687 Peptidase dimerisation domain AMIR_RS19870 PF13409 Glutathione S-transferase, N-terminal domain AMIR_RS19900 PF00561 alpha/beta hydrolase fold AMIR_RS19905 PF02224 Cytidylate kinase AMIR_RS19925 PF07730 Histidine kinase AMIR_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS19925 PF05231 MASE1 AMIR_RS19930 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS19930 PF00072 Response regulator receiver domain AMIR_RS19940 PF00975 Thioesterase domain AMIR_RS19950 PF01494 FAD binding domain AMIR_RS19970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS19970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS19990 PF08713 DNA alkylation repair enzyme AMIR_RS19995 PF12146 Serine aminopeptidase, S33 AMIR_RS20000 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20005 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMIR_RS20005 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMIR_RS20010 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS20025 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS20025 PF14765 Polyketide synthase dehydratase AMIR_RS20025 PF00550 Phosphopantetheine attachment site AMIR_RS20025 PF08659 KR domain AMIR_RS20025 PF00698 Acyl transferase domain AMIR_RS20025 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS20025 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS20035 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS20070 PF00069 Protein kinase domain AMIR_RS20085 PF16483 Beta-1,3-glucanase AMIR_RS20085 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20090 PF00501 AMP-binding enzyme AMIR_RS20090 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20090 PF00668 Condensation domain AMIR_RS20090 PF00550 Phosphopantetheine attachment site AMIR_RS20095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS20100 PF01070 FMN-dependent dehydrogenase AMIR_RS20110 PF00999 Sodium/hydrogen exchanger family AMIR_RS20120 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20120 PF00672 HAMP domain AMIR_RS20145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS20145 PF13378 Enolase C-terminal domain-like AMIR_RS20160 PF00005 ABC transporter AMIR_RS20165 PF04954 Siderophore-interacting protein AMIR_RS20165 PF00664 ABC transporter transmembrane region AMIR_RS20165 PF00005 ABC transporter AMIR_RS20165 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS20180 PF00005 ABC transporter AMIR_RS20190 PF00072 Response regulator receiver domain AMIR_RS20190 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS20195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20195 PF07730 Histidine kinase AMIR_RS20195 PF05231 MASE1 AMIR_RS20225 PF00753 Metallo-beta-lactamase superfamily AMIR_RS20230 PF07498 Rho termination factor, N-terminal domain AMIR_RS20230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS20230 PF07497 Rho termination factor, RNA-binding domain AMIR_RS20245 PF02954 Bacterial regulatory protein, Fis family AMIR_RS20260 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20260 PF18665 Tetracyclin repressor-like, C-terminal domain AMIR_RS20270 PF16736 Single Cache-like AMIR_RS20270 PF00989 PAS fold AMIR_RS20270 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20275 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20275 PF00072 Response regulator receiver domain AMIR_RS20285 PF12704 MacB-like periplasmic core domain AMIR_RS20285 PF02687 FtsX-like permease family AMIR_RS20285 PF00005 ABC transporter AMIR_RS20290 PF12704 MacB-like periplasmic core domain AMIR_RS20290 PF02687 FtsX-like permease family AMIR_RS20305 PF00266 Aminotransferase class-V AMIR_RS20310 PF05199 GMC oxidoreductase AMIR_RS20310 PF00732 GMC oxidoreductase AMIR_RS20315 PF16864 Dimerisation domain AMIR_RS20315 PF00891 O-methyltransferase domain AMIR_RS20335 PF01613 Flavin reductase like domain AMIR_RS20345 PF00550 Phosphopantetheine attachment site AMIR_RS20345 PF00698 Acyl transferase domain AMIR_RS20345 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS20345 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS20345 PF08659 KR domain AMIR_RS20345 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS20350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS20360 PF07690 Major Facilitator Superfamily AMIR_RS20365 PF01638 HxlR-like helix-turn-helix AMIR_RS20370 PF00561 alpha/beta hydrolase fold AMIR_RS20375 PF09594 Glycosyltransferase family 87 AMIR_RS20380 PF00535 Glycosyl transferase family 2 AMIR_RS20390 PF06441 Epoxide hydrolase N terminus AMIR_RS20400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS20400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS20415 PF03109 ABC1 family AMIR_RS20425 PF00106 short chain dehydrogenase AMIR_RS20430 PF00732 GMC oxidoreductase AMIR_RS20430 PF05199 GMC oxidoreductase AMIR_RS20440 PF00067 Cytochrome P450 AMIR_RS20450 PF12833 Helix-turn-helix domain AMIR_RS20450 PF02311 AraC-like ligand binding domain AMIR_RS20460 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS20460 PF00107 Zinc-binding dehydrogenase AMIR_RS20470 PF01613 Flavin reductase like domain AMIR_RS20500 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20500 PF00501 AMP-binding enzyme AMIR_RS20505 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS20520 PF02311 AraC-like ligand binding domain AMIR_RS20520 PF12833 Helix-turn-helix domain AMIR_RS20540 PF05524 PEP-utilising enzyme, N-terminal AMIR_RS20540 PF02896 PEP-utilising enzyme, TIM barrel domain AMIR_RS20540 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS20550 PF01799 [2Fe-2S] binding domain AMIR_RS20550 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS20555 PF00176 SNF2 family N-terminal domain AMIR_RS20555 PF04434 SWIM zinc finger AMIR_RS20555 PF00271 Helicase conserved C-terminal domain AMIR_RS20560 PF00176 SNF2 family N-terminal domain AMIR_RS20560 PF00271 Helicase conserved C-terminal domain AMIR_RS20570 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS20580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS20580 PF13378 Enolase C-terminal domain-like AMIR_RS20595 PF01494 FAD binding domain AMIR_RS20605 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20605 PF00672 HAMP domain AMIR_RS20610 PF00072 Response regulator receiver domain AMIR_RS20610 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20640 PF02678 Pirin AMIR_RS20640 PF05726 Pirin C-terminal cupin domain AMIR_RS20655 PF00561 alpha/beta hydrolase fold AMIR_RS20675 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS20675 PF02013 Cellulose or protein binding domain AMIR_RS20710 PF01625 Peptide methionine sulfoxide reductase AMIR_RS20720 PF02515 CoA-transferase family III AMIR_RS20725 PF01970 Tripartite tricarboxylate transporter TctA family AMIR_RS20735 PF03401 Tripartite tricarboxylate transporter family receptor AMIR_RS20740 PF01614 Bacterial transcriptional regulator AMIR_RS20740 PF09339 IclR helix-turn-helix domain AMIR_RS20745 PF03737 Aldolase/RraA AMIR_RS20750 PF01842 ACT domain AMIR_RS20750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS20750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS20785 PF03575 Peptidase family S51 AMIR_RS20790 PF00069 Protein kinase domain AMIR_RS20805 PF03211 Pectate lyase AMIR_RS20810 PF14765 Polyketide synthase dehydratase AMIR_RS20810 PF00550 Phosphopantetheine attachment site AMIR_RS20810 PF00698 Acyl transferase domain AMIR_RS20810 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS20810 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS20810 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS20810 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS20810 PF08659 KR domain AMIR_RS20815 PF01047 MarR family AMIR_RS20825 PF00557 Metallopeptidase family M24 AMIR_RS20835 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMIR_RS20835 PF10635 DisA bacterial checkpoint controller linker region AMIR_RS20845 PF00795 Carbon-nitrogen hydrolase AMIR_RS20855 PF00106 short chain dehydrogenase AMIR_RS20865 PF00561 alpha/beta hydrolase fold AMIR_RS20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS20875 PF08269 Cache domain AMIR_RS20880 PF01475 Ferric uptake regulator family AMIR_RS20885 PF00141 Peroxidase AMIR_RS20890 PF05922 Peptidase inhibitor I9 AMIR_RS20890 PF00082 Subtilase family AMIR_RS20895 PF05922 Peptidase inhibitor I9 AMIR_RS20895 PF00082 Subtilase family AMIR_RS20900 PF17961 Bacterial Ig domain AMIR_RS20900 PF04650 YSIRK type signal peptide AMIR_RS20900 PF00746 LPXTG cell wall anchor motif AMIR_RS20900 PF17210 SdrD B-like domain AMIR_RS20905 PF01095 Pectinesterase AMIR_RS20910 PF00544 Pectate lyase AMIR_RS20920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS20930 PF01494 FAD binding domain AMIR_RS20935 PF00202 Aminotransferase class-III AMIR_RS20945 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS20955 PF09334 tRNA synthetases class I (M) AMIR_RS20955 PF08264 Anticodon-binding domain of tRNA AMIR_RS20955 PF01588 Putative tRNA binding domain AMIR_RS20965 PF00892 EamA-like transporter family AMIR_RS20970 PF01494 FAD binding domain AMIR_RS20980 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20980 PF00501 AMP-binding enzyme AMIR_RS20990 PF00550 Phosphopantetheine attachment site AMIR_RS20990 PF00668 Condensation domain AMIR_RS20990 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20990 PF00501 AMP-binding enzyme AMIR_RS21005 PF03466 LysR substrate binding domain AMIR_RS21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21010 PF00459 Inositol monophosphatase family AMIR_RS21040 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS21055 PF00916 Sulfate permease family AMIR_RS21055 PF01740 STAS domain AMIR_RS21080 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS21085 PF04072 Leucine carboxyl methyltransferase AMIR_RS21090 PF00067 Cytochrome P450 AMIR_RS21095 PF16124 RecQ zinc-binding AMIR_RS21095 PF00271 Helicase conserved C-terminal domain AMIR_RS21095 PF00270 DEAD/DEAH box helicase AMIR_RS21095 PF09382 RQC domain AMIR_RS21095 PF00570 HRDC domain AMIR_RS21100 PF00457 Glycosyl hydrolases family 11 AMIR_RS21105 PF02785 Biotin carboxylase C-terminal domain AMIR_RS21105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS21105 PF00289 Biotin carboxylase, N-terminal domain AMIR_RS21110 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21120 PF13416 Bacterial extracellular solute-binding protein AMIR_RS21130 PF00248 Aldo/keto reductase family AMIR_RS21145 PF03466 LysR substrate binding domain AMIR_RS21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21150 PF00106 short chain dehydrogenase AMIR_RS21170 PF00106 short chain dehydrogenase AMIR_RS21200 PF12464 Maltose acetyltransferase AMIR_RS21200 PF14602 Hexapeptide repeat of succinyl-transferase AMIR_RS21215 PF01820 D-ala D-ala ligase N-terminus AMIR_RS21215 PF07478 D-ala D-ala ligase C-terminus AMIR_RS21225 PF01596 O-methyltransferase AMIR_RS21230 PF01761 3-dehydroquinate synthase AMIR_RS21235 PF00072 Response regulator receiver domain AMIR_RS21235 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS21240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMIR_RS21240 PF07730 Histidine kinase AMIR_RS21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS21240 PF00672 HAMP domain AMIR_RS21280 PF00364 Biotin-requiring enzyme AMIR_RS21280 PF00561 alpha/beta hydrolase fold AMIR_RS21305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS21310 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21320 PF01554 MatE AMIR_RS21335 PF01022 Bacterial regulatory protein, arsR family AMIR_RS21350 PF01022 Bacterial regulatory protein, arsR family AMIR_RS21355 PF03239 Iron permease FTR1 family AMIR_RS21360 PF13473 Cupredoxin-like domain AMIR_RS21360 PF09375 Imelysin AMIR_RS21365 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMIR_RS21365 PF04261 Dyp-type peroxidase family AMIR_RS21380 PF06441 Epoxide hydrolase N terminus AMIR_RS21385 PF00005 ABC transporter AMIR_RS21390 PF01032 FecCD transport family AMIR_RS21395 PF01032 FecCD transport family AMIR_RS21400 PF01497 Periplasmic binding protein AMIR_RS21405 PF02983 Alpha-lytic protease prodomain AMIR_RS21420 PF01276 Orn/Lys/Arg decarboxylase, major domain AMIR_RS21420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMIR_RS21450 PF00581 Rhodanese-like domain AMIR_RS21455 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS21455 PF01565 FAD binding domain AMIR_RS21470 PF01613 Flavin reductase like domain AMIR_RS21475 PF03466 LysR substrate binding domain AMIR_RS21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21480 PF00296 Luciferase-like monooxygenase AMIR_RS21485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS21485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS21485 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS21490 PF01965 DJ-1/PfpI family AMIR_RS21500 PF12833 Helix-turn-helix domain AMIR_RS21515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS21520 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21525 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS21525 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS21530 PF00005 ABC transporter AMIR_RS21535 PF17961 Bacterial Ig domain AMIR_RS21535 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AMIR_RS21535 PF04650 YSIRK type signal peptide AMIR_RS21535 PF00746 LPXTG cell wall anchor motif AMIR_RS21535 PF17210 SdrD B-like domain AMIR_RS21570 PF01374 Glycosyl hydrolase family 46 AMIR_RS21575 PF00072 Response regulator receiver domain AMIR_RS21580 PF00890 FAD binding domain AMIR_RS21585 PF01037 Lrp/AsnC ligand binding domain AMIR_RS21595 PF03741 Integral membrane protein TerC family AMIR_RS21600 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21600 PF16295 Tetracyclin repressor-like, C-terminal domain AMIR_RS21605 PF01494 FAD binding domain AMIR_RS21610 PF07690 Major Facilitator Superfamily AMIR_RS21620 PF00999 Sodium/hydrogen exchanger family AMIR_RS21635 PF07690 Major Facilitator Superfamily AMIR_RS21665 PF00072 Response regulator receiver domain AMIR_RS21665 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS21670 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS21675 PF00221 Aromatic amino acid lyase AMIR_RS21685 PF00501 AMP-binding enzyme AMIR_RS21685 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS21690 PF00698 Acyl transferase domain AMIR_RS21690 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS21690 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21690 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS21690 PF00550 Phosphopantetheine attachment site AMIR_RS21690 PF08659 KR domain AMIR_RS21690 PF14765 Polyketide synthase dehydratase AMIR_RS21695 PF00698 Acyl transferase domain AMIR_RS21695 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS21695 PF00550 Phosphopantetheine attachment site AMIR_RS21695 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS21695 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21695 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS21695 PF08659 KR domain AMIR_RS21695 PF14765 Polyketide synthase dehydratase AMIR_RS21700 PF01494 FAD binding domain AMIR_RS21705 PF00698 Acyl transferase domain AMIR_RS21705 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS21705 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS21705 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21705 PF08990 Erythronolide synthase docking AMIR_RS21705 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS21705 PF08659 KR domain AMIR_RS21705 PF00550 Phosphopantetheine attachment site AMIR_RS21705 PF14765 Polyketide synthase dehydratase AMIR_RS21715 PF06722 Protein of unknown function (DUF1205) AMIR_RS21720 PF13649 Methyltransferase domain AMIR_RS21740 PF03060 Nitronate monooxygenase AMIR_RS21745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS21745 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS21745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS21755 PF00501 AMP-binding enzyme AMIR_RS21760 PF00108 Thiolase, N-terminal domain AMIR_RS21760 PF02803 Thiolase, C-terminal domain AMIR_RS21765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS21765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS21765 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS21770 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21770 PF08361 MAATS-type transcriptional repressor, C-terminal region AMIR_RS21775 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIR_RS21780 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIR_RS21785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIR_RS21785 PF00034 Cytochrome c AMIR_RS21785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMIR_RS21790 PF01799 [2Fe-2S] binding domain AMIR_RS21790 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS21795 PF13411 MerR HTH family regulatory protein AMIR_RS21800 PF00348 Polyprenyl synthetase AMIR_RS21805 PF01040 UbiA prenyltransferase family AMIR_RS21810 PF01494 FAD binding domain AMIR_RS21815 PF00891 O-methyltransferase domain AMIR_RS21820 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS21825 PF00067 Cytochrome P450 AMIR_RS21835 PF00155 Aminotransferase class I and II AMIR_RS21865 PF00188 Cysteine-rich secretory protein family AMIR_RS21875 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS21880 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21880 PF16925 Tetracyclin repressor-like, C-terminal domain AMIR_RS21900 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21905 PF13411 MerR HTH family regulatory protein AMIR_RS21920 PF01161 Phosphatidylethanolamine-binding protein AMIR_RS21925 PF13569 Domain of unknown function (DUF4132) AMIR_RS21940 PF13439 Glycosyltransferase Family 4 AMIR_RS21940 PF00534 Glycosyl transferases group 1 AMIR_RS21975 PF01783 Ribosomal L32p protein family AMIR_RS21980 PF01197 Ribosomal protein L31 AMIR_RS21985 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS21985 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS21990 PF06628 Catalase-related immune-responsive AMIR_RS21990 PF00199 Catalase AMIR_RS21995 PF00117 Glutamine amidotransferase class-I AMIR_RS21995 PF00958 GMP synthase C terminal domain AMIR_RS21995 PF02540 NAD synthase AMIR_RS22000 PF03473 MOSC domain AMIR_RS22000 PF03475 3-alpha domain AMIR_RS22020 PF00107 Zinc-binding dehydrogenase AMIR_RS22020 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22030 PF00107 Zinc-binding dehydrogenase AMIR_RS22030 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22050 PF03466 LysR substrate binding domain AMIR_RS22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS22060 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22060 PF08659 KR domain AMIR_RS22060 PF14765 Polyketide synthase dehydratase AMIR_RS22060 PF00550 Phosphopantetheine attachment site AMIR_RS22060 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22060 PF00698 Acyl transferase domain AMIR_RS22060 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22060 PF08990 Erythronolide synthase docking AMIR_RS22060 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22070 PF00072 Response regulator receiver domain AMIR_RS22070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS22075 PF07730 Histidine kinase AMIR_RS22075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS22090 PF01593 Flavin containing amine oxidoreductase AMIR_RS22095 PF00950 ABC 3 transport family AMIR_RS22100 PF00005 ABC transporter AMIR_RS22105 PF01297 Zinc-uptake complex component A periplasmic AMIR_RS22110 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22110 PF14765 Polyketide synthase dehydratase AMIR_RS22110 PF00550 Phosphopantetheine attachment site AMIR_RS22110 PF00698 Acyl transferase domain AMIR_RS22110 PF08659 KR domain AMIR_RS22110 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22110 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22110 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22115 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22115 PF00550 Phosphopantetheine attachment site AMIR_RS22115 PF08659 KR domain AMIR_RS22115 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22115 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22115 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22115 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22115 PF00698 Acyl transferase domain AMIR_RS22115 PF00550 Phosphopantetheine attachment site AMIR_RS22115 PF00698 Acyl transferase domain AMIR_RS22115 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22115 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22115 PF08659 KR domain AMIR_RS22115 PF14765 Polyketide synthase dehydratase AMIR_RS22115 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22115 PF14765 Polyketide synthase dehydratase AMIR_RS22120 PF00550 Phosphopantetheine attachment site AMIR_RS22120 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22120 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22120 PF00698 Acyl transferase domain AMIR_RS22120 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22120 PF08659 KR domain AMIR_RS22120 PF14765 Polyketide synthase dehydratase AMIR_RS22120 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22125 PF00698 Acyl transferase domain AMIR_RS22125 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22125 PF14765 Polyketide synthase dehydratase AMIR_RS22125 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22125 PF00698 Acyl transferase domain AMIR_RS22125 PF08659 KR domain AMIR_RS22125 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22125 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22125 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22125 PF08659 KR domain AMIR_RS22125 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22125 PF00550 Phosphopantetheine attachment site AMIR_RS22125 PF00550 Phosphopantetheine attachment site AMIR_RS22125 PF14765 Polyketide synthase dehydratase AMIR_RS22135 PF00202 Aminotransferase class-III AMIR_RS22150 PF01613 Flavin reductase like domain AMIR_RS22165 PF03704 Bacterial transcriptional activator domain AMIR_RS22165 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22175 PF01593 Flavin containing amine oxidoreductase AMIR_RS22180 PF05368 NmrA-like family AMIR_RS22190 PF01925 Sulfite exporter TauE/SafE AMIR_RS22205 PF00106 short chain dehydrogenase AMIR_RS22235 PF00175 Oxidoreductase NAD-binding domain AMIR_RS22235 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS22235 PF00970 Oxidoreductase FAD-binding domain AMIR_RS22250 PF00501 AMP-binding enzyme AMIR_RS22265 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS22270 PF00881 Nitroreductase family AMIR_RS22285 PF00069 Protein kinase domain AMIR_RS22285 PF03793 PASTA domain AMIR_RS22295 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22295 PF00107 Zinc-binding dehydrogenase AMIR_RS22310 PF01047 MarR family AMIR_RS22310 PF00480 ROK family AMIR_RS22325 PF12544 Lysine-2,3-aminomutase AMIR_RS22325 PF04055 Radical SAM superfamily AMIR_RS22330 PF00550 Phosphopantetheine attachment site AMIR_RS22330 PF07993 Male sterility protein AMIR_RS22330 PF00501 AMP-binding enzyme AMIR_RS22330 PF00668 Condensation domain AMIR_RS22330 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22335 PF01494 FAD binding domain AMIR_RS22340 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS22345 PF04299 Putative FMN-binding domain AMIR_RS22350 PF00501 AMP-binding enzyme AMIR_RS22350 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22350 PF00668 Condensation domain AMIR_RS22350 PF00550 Phosphopantetheine attachment site AMIR_RS22360 PF16861 Carbamoyltransferase C-terminus AMIR_RS22360 PF02543 Carbamoyltransferase N-terminus AMIR_RS22365 PF00975 Thioesterase domain AMIR_RS22370 PF00067 Cytochrome P450 AMIR_RS22375 PF00550 Phosphopantetheine attachment site AMIR_RS22375 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22375 PF00501 AMP-binding enzyme AMIR_RS22375 PF00668 Condensation domain AMIR_RS22385 PF00288 GHMP kinases N terminal domain AMIR_RS22390 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22390 PF00668 Condensation domain AMIR_RS22390 PF00975 Thioesterase domain AMIR_RS22390 PF00550 Phosphopantetheine attachment site AMIR_RS22390 PF00501 AMP-binding enzyme AMIR_RS22395 PF01212 Beta-eliminating lyase AMIR_RS22400 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS22405 PF14698 Argininosuccinate lyase C-terminal AMIR_RS22405 PF00206 Lyase AMIR_RS22410 PF03621 MbtH-like protein AMIR_RS22415 PF00550 Phosphopantetheine attachment site AMIR_RS22415 PF00501 AMP-binding enzyme AMIR_RS22415 PF00668 Condensation domain AMIR_RS22415 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22425 PF08241 Methyltransferase domain AMIR_RS22425 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22425 PF00668 Condensation domain AMIR_RS22425 PF00501 AMP-binding enzyme AMIR_RS22425 PF00975 Thioesterase domain AMIR_RS22425 PF00550 Phosphopantetheine attachment site AMIR_RS22425 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS22430 PF00975 Thioesterase domain AMIR_RS22430 PF00501 AMP-binding enzyme AMIR_RS22430 PF00550 Phosphopantetheine attachment site AMIR_RS22430 PF00668 Condensation domain AMIR_RS22430 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22440 PF13538 UvrD-like helicase C-terminal domain AMIR_RS22445 PF03176 MMPL family AMIR_RS22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS22450 PF05384 Sensor protein DegS AMIR_RS22450 PF07730 Histidine kinase AMIR_RS22455 PF00072 Response regulator receiver domain AMIR_RS22455 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS22465 PF00672 HAMP domain AMIR_RS22465 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS22470 PF00072 Response regulator receiver domain AMIR_RS22470 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22475 PF02983 Alpha-lytic protease prodomain AMIR_RS22480 PF00404 Dockerin type I domain AMIR_RS22480 PF00657 GDSL-like Lipase/Acylhydrolase AMIR_RS22575 PF00550 Phosphopantetheine attachment site AMIR_RS22585 PF00501 AMP-binding enzyme AMIR_RS22585 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22585 PF00550 Phosphopantetheine attachment site AMIR_RS22585 PF00668 Condensation domain AMIR_RS22750 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS22760 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS22775 PF01609 Transposase DDE domain AMIR_RS22775 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMIR_RS22810 PF13302 Acetyltransferase (GNAT) domain AMIR_RS22820 PF00975 Thioesterase domain AMIR_RS22820 PF00550 Phosphopantetheine attachment site AMIR_RS22820 PF00668 Condensation domain AMIR_RS22820 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22820 PF00501 AMP-binding enzyme AMIR_RS22825 PF00550 Phosphopantetheine attachment site AMIR_RS22825 PF00668 Condensation domain AMIR_RS22825 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22825 PF00501 AMP-binding enzyme AMIR_RS22830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS22835 PF00155 Aminotransferase class I and II AMIR_RS22845 PF03621 MbtH-like protein AMIR_RS22860 PF00067 Cytochrome P450 AMIR_RS22865 PF03704 Bacterial transcriptional activator domain AMIR_RS22865 PF00931 NB-ARC domain AMIR_RS22865 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22870 PF01070 FMN-dependent dehydrogenase AMIR_RS22875 PF00067 Cytochrome P450 AMIR_RS22880 PF03621 MbtH-like protein AMIR_RS22890 PF01494 FAD binding domain AMIR_RS22895 PF00106 short chain dehydrogenase AMIR_RS22905 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22905 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS22905 PF14765 Polyketide synthase dehydratase AMIR_RS22905 PF00698 Acyl transferase domain AMIR_RS22905 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22905 PF08659 KR domain AMIR_RS22905 PF00550 Phosphopantetheine attachment site AMIR_RS22905 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22910 PF00067 Cytochrome P450 AMIR_RS22915 PF00135 Carboxylesterase family AMIR_RS22925 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS22935 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS22940 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS22945 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS22945 PF14310 Fibronectin type III-like domain AMIR_RS22945 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS22960 PF01494 FAD binding domain AMIR_RS23005 PF00376 MerR family regulatory protein AMIR_RS23005 PF09278 MerR, DNA binding AMIR_RS23015 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS23015 PF00501 AMP-binding enzyme AMIR_RS23020 PF16715 Cyclodipeptide synthase AMIR_RS23045 PF03466 LysR substrate binding domain AMIR_RS23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23050 PF13291 ACT domain AMIR_RS23050 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS23055 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMIR_RS23055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMIR_RS23055 PF02929 Beta galactosidase small chain AMIR_RS23055 PF16353 Domain of unknown function(DUF4981) AMIR_RS23055 PF00703 Glycosyl hydrolases family 2 AMIR_RS23065 PF17874 MalT-like TPR region AMIR_RS23065 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS23070 PF14765 Polyketide synthase dehydratase AMIR_RS23070 PF08659 KR domain AMIR_RS23070 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS23070 PF00698 Acyl transferase domain AMIR_RS23070 PF00550 Phosphopantetheine attachment site AMIR_RS23080 PF13520 Amino acid permease AMIR_RS23120 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS23120 PF00107 Zinc-binding dehydrogenase AMIR_RS23130 PF00206 Lyase AMIR_RS23130 PF02655 ATP-grasp domain AMIR_RS23140 PF00501 AMP-binding enzyme AMIR_RS23150 PF07859 alpha/beta hydrolase fold AMIR_RS23155 PF02780 Transketolase, C-terminal domain AMIR_RS23155 PF02779 Transketolase, pyrimidine binding domain AMIR_RS23155 PF00364 Biotin-requiring enzyme AMIR_RS23160 PF00206 Lyase AMIR_RS23160 PF10397 Adenylosuccinate lyase C-terminus AMIR_RS23190 PF00795 Carbon-nitrogen hydrolase AMIR_RS23195 PF07859 alpha/beta hydrolase fold AMIR_RS23205 PF01095 Pectinesterase AMIR_RS23210 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS23220 PF01339 CheB methylesterase AMIR_RS23220 PF00072 Response regulator receiver domain AMIR_RS23235 PF00005 ABC transporter AMIR_RS23245 PF00296 Luciferase-like monooxygenase AMIR_RS23260 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS23285 PF00553 Cellulose binding domain AMIR_RS23285 PF01341 Glycosyl hydrolases family 6 AMIR_RS23290 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23295 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS23295 PF00501 AMP-binding enzyme AMIR_RS23300 PF00171 Aldehyde dehydrogenase family AMIR_RS23305 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIR_RS23310 PF00144 Beta-lactamase AMIR_RS23320 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS23320 PF00072 Response regulator receiver domain AMIR_RS23325 PF00144 Beta-lactamase AMIR_RS23345 PF00202 Aminotransferase class-III AMIR_RS23360 PF00698 Acyl transferase domain AMIR_RS23360 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS23360 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS23360 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS23360 PF08659 KR domain AMIR_RS23360 PF00550 Phosphopantetheine attachment site AMIR_RS23360 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS23360 PF14765 Polyketide synthase dehydratase AMIR_RS23365 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS23365 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS23365 PF00550 Phosphopantetheine attachment site AMIR_RS23365 PF08659 KR domain AMIR_RS23365 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS23365 PF08659 KR domain AMIR_RS23365 PF00698 Acyl transferase domain AMIR_RS23365 PF14765 Polyketide synthase dehydratase AMIR_RS23365 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS23365 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS23365 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS23365 PF00698 Acyl transferase domain AMIR_RS23365 PF00550 Phosphopantetheine attachment site AMIR_RS23365 PF14765 Polyketide synthase dehydratase AMIR_RS23370 PF01613 Flavin reductase like domain AMIR_RS23380 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS23390 PF07690 Major Facilitator Superfamily AMIR_RS23395 PF01638 HxlR-like helix-turn-helix AMIR_RS23420 PF00561 alpha/beta hydrolase fold AMIR_RS23425 PF00005 ABC transporter AMIR_RS23435 PF00557 Metallopeptidase family M24 AMIR_RS23435 PF05195 Aminopeptidase P, N-terminal domain AMIR_RS23440 PF00561 alpha/beta hydrolase fold AMIR_RS23445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS23445 PF00005 ABC transporter AMIR_RS23450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS23450 PF00005 ABC transporter AMIR_RS23455 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS23460 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS23460 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIR_RS23465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS23470 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS23470 PF07729 FCD domain AMIR_RS23475 PF00171 Aldehyde dehydrogenase family AMIR_RS23480 PF05544 Proline racemase AMIR_RS23485 PF00701 Dihydrodipicolinate synthetase family AMIR_RS23490 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS23490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS23500 PF01266 FAD dependent oxidoreductase AMIR_RS23510 PF01791 DeoC/LacD family aldolase AMIR_RS23515 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS23520 PF00591 Glycosyl transferase family, a/b domain AMIR_RS23520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS23520 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS23525 PF01979 Amidohydrolase family AMIR_RS23530 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS23530 PF00331 Glycosyl hydrolase family 10 AMIR_RS23585 PF00005 ABC transporter AMIR_RS23595 PF08281 Sigma-70, region 4 AMIR_RS23595 PF04542 Sigma-70 region 2 AMIR_RS23605 PF02233 NAD(P) transhydrogenase beta subunit AMIR_RS23610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS23610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS23610 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMIR_RS23615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS23615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS23625 PF14256 YwiC-like protein AMIR_RS23630 PF07732 Multicopper oxidase AMIR_RS23670 PF04072 Leucine carboxyl methyltransferase AMIR_RS23700 PF01297 Zinc-uptake complex component A periplasmic AMIR_RS23710 PF00005 ABC transporter AMIR_RS23715 PF00950 ABC 3 transport family AMIR_RS23725 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS23725 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS23765 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS23775 PF00005 ABC transporter AMIR_RS23780 PF01032 FecCD transport family AMIR_RS23795 PF01425 Amidase AMIR_RS23800 PF00753 Metallo-beta-lactamase superfamily AMIR_RS23815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23815 PF03466 LysR substrate binding domain AMIR_RS23830 PF17754 MftR C-terminal domain AMIR_RS23830 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23835 PF16363 GDP-mannose 4,6 dehydratase AMIR_RS23840 PF04143 Sulphur transport AMIR_RS23850 PF01494 FAD binding domain AMIR_RS23855 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS23865 PF07690 Major Facilitator Superfamily AMIR_RS23870 PF08362 YcdC-like protein, C-terminal region AMIR_RS23870 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23915 PF00067 Cytochrome P450 AMIR_RS23930 PF03259 Roadblock/LC7 domain AMIR_RS23945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS23945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS23960 PF02595 Glycerate kinase family AMIR_RS23975 PF03466 LysR substrate binding domain AMIR_RS23975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23980 PF00202 Aminotransferase class-III AMIR_RS24030 PF00067 Cytochrome P450 AMIR_RS24040 PF00535 Glycosyl transferase family 2 AMIR_RS24050 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS24065 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS24065 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS24075 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS24080 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS24080 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS24085 PF00067 Cytochrome P450 AMIR_RS24090 PF00069 Protein kinase domain AMIR_RS24095 PF02441 Flavoprotein AMIR_RS24100 PF01575 MaoC like domain AMIR_RS24130 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS24130 PF00501 AMP-binding enzyme AMIR_RS24130 PF00550 Phosphopantetheine attachment site AMIR_RS24135 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS24135 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS24140 PF00171 Aldehyde dehydrogenase family AMIR_RS24145 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS24145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS24145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS24150 PF00501 AMP-binding enzyme AMIR_RS24155 PF00550 Phosphopantetheine attachment site AMIR_RS24160 PF00664 ABC transporter transmembrane region AMIR_RS24160 PF00005 ABC transporter AMIR_RS24165 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24170 PF07690 Major Facilitator Superfamily AMIR_RS24175 PF07690 Major Facilitator Superfamily AMIR_RS24180 PF08450 SMP-30/Gluconolactonase/LRE-like region AMIR_RS24185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS24205 PF14310 Fibronectin type III-like domain AMIR_RS24205 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS24205 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS24235 PF04055 Radical SAM superfamily AMIR_RS24235 PF06969 HemN C-terminal domain AMIR_RS24240 PF00293 NUDIX domain AMIR_RS24250 PF01546 Peptidase family M20/M25/M40 AMIR_RS24250 PF07687 Peptidase dimerisation domain AMIR_RS24265 PF01048 Phosphorylase superfamily AMIR_RS24270 PF00005 ABC transporter AMIR_RS24275 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS24285 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS24295 PF01979 Amidohydrolase family AMIR_RS24305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS24305 PF03466 LysR substrate binding domain AMIR_RS24320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS24355 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS24355 PF07729 FCD domain AMIR_RS24360 PF00005 ABC transporter AMIR_RS24365 PF01032 FecCD transport family AMIR_RS24370 PF01032 FecCD transport family AMIR_RS24380 PF13575 Domain of unknown function (DUF4135) AMIR_RS24380 PF05147 Lanthionine synthetase C-like protein AMIR_RS24385 PF01063 Amino-transferase class IV AMIR_RS24390 PF00296 Luciferase-like monooxygenase AMIR_RS24400 PF00501 AMP-binding enzyme AMIR_RS24410 PF00501 AMP-binding enzyme AMIR_RS24410 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS24410 PF00668 Condensation domain AMIR_RS24410 PF00975 Thioesterase domain AMIR_RS24410 PF00550 Phosphopantetheine attachment site AMIR_RS24415 PF00248 Aldo/keto reductase family AMIR_RS24425 PF05690 Thiazole biosynthesis protein ThiG AMIR_RS24440 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS24440 PF00672 HAMP domain AMIR_RS24450 PF13350 Tyrosine phosphatase family AMIR_RS24460 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS24465 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS24465 PF17853 GGDEF-like domain AMIR_RS24465 PF05651 Putative sugar diacid recognition AMIR_RS24480 PF07690 Major Facilitator Superfamily AMIR_RS24495 PF02595 Glycerate kinase family AMIR_RS24505 PF00672 HAMP domain AMIR_RS24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24505 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24510 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS24510 PF00072 Response regulator receiver domain AMIR_RS24520 PF00999 Sodium/hydrogen exchanger family AMIR_RS24525 PF07690 Major Facilitator Superfamily AMIR_RS24535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS24535 PF03466 LysR substrate binding domain AMIR_RS24545 PF00106 short chain dehydrogenase AMIR_RS24550 PF01975 Survival protein SurE AMIR_RS24570 PF01593 Flavin containing amine oxidoreductase AMIR_RS24580 PF00535 Glycosyl transferase family 2 AMIR_RS24600 PF04389 Peptidase family M28 AMIR_RS24600 PF01483 Proprotein convertase P-domain AMIR_RS24615 PF00535 Glycosyl transferase family 2 AMIR_RS24620 PF00534 Glycosyl transferases group 1 AMIR_RS24620 PF13579 Glycosyl transferase 4-like domain AMIR_RS24625 PF00534 Glycosyl transferases group 1 AMIR_RS24625 PF13439 Glycosyltransferase Family 4 AMIR_RS24650 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS24650 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS24650 PF14310 Fibronectin type III-like domain AMIR_RS24655 PF00544 Pectate lyase AMIR_RS24660 PF01095 Pectinesterase AMIR_RS24665 PF00561 alpha/beta hydrolase fold AMIR_RS24670 PF03664 Glycosyl hydrolase family 62 AMIR_RS24670 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS24685 PF03848 Tellurite resistance protein TehB AMIR_RS24690 PF01494 FAD binding domain AMIR_RS24700 PF03176 MMPL family AMIR_RS24715 PF06722 Protein of unknown function (DUF1205) AMIR_RS24720 PF01595 Cyclin M transmembrane N-terminal domain AMIR_RS24720 PF03471 Transporter associated domain AMIR_RS24720 PF00571 CBS domain AMIR_RS24765 PF04075 F420H(2)-dependent quinone reductase AMIR_RS24770 PF01300 Telomere recombination AMIR_RS24795 PF00072 Response regulator receiver domain AMIR_RS24795 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS24815 PF13302 Acetyltransferase (GNAT) domain AMIR_RS24820 PF02817 e3 binding domain AMIR_RS24820 PF00364 Biotin-requiring enzyme AMIR_RS24820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS24825 PF02779 Transketolase, pyrimidine binding domain AMIR_RS24825 PF02780 Transketolase, C-terminal domain AMIR_RS24830 PF00676 Dehydrogenase E1 component AMIR_RS24835 PF13404 AsnC-type helix-turn-helix domain AMIR_RS24835 PF01037 Lrp/AsnC ligand binding domain AMIR_RS24840 PF00188 Cysteine-rich secretory protein family AMIR_RS24845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24845 PF00672 HAMP domain AMIR_RS24845 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24850 PF00072 Response regulator receiver domain AMIR_RS24850 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS24875 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS24875 PF00563 EAL domain AMIR_RS24875 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS24885 PF00107 Zinc-binding dehydrogenase AMIR_RS24885 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS24905 PF00348 Polyprenyl synthetase AMIR_RS24910 PF02401 LytB protein AMIR_RS24915 PF02780 Transketolase, C-terminal domain AMIR_RS24915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS24915 PF02779 Transketolase, pyrimidine binding domain AMIR_RS24930 PF04542 Sigma-70 region 2 AMIR_RS24930 PF04545 Sigma-70, region 4 AMIR_RS24935 PF00535 Glycosyl transferase family 2 AMIR_RS24940 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS24940 PF00107 Zinc-binding dehydrogenase AMIR_RS24945 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24945 PF17926 Tetracyclin repressor-like, C-terminal domain AMIR_RS24955 PF03601 Conserved hypothetical protein 698 AMIR_RS24965 PF00072 Response regulator receiver domain AMIR_RS24965 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS24970 PF01590 GAF domain AMIR_RS24970 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24970 PF08446 PAS fold AMIR_RS24970 PF00360 Phytochrome region AMIR_RS24970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24975 PF00072 Response regulator receiver domain AMIR_RS25010 PF13538 UvrD-like helicase C-terminal domain AMIR_RS25025 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS25025 PF17926 Tetracyclin repressor-like, C-terminal domain AMIR_RS25030 PF00106 short chain dehydrogenase AMIR_RS25040 PF07676 WD40-like Beta Propeller Repeat AMIR_RS25055 PF13538 UvrD-like helicase C-terminal domain AMIR_RS25060 PF00005 ABC transporter AMIR_RS25065 PF01032 FecCD transport family AMIR_RS25070 PF01032 FecCD transport family AMIR_RS25075 PF00294 pfkB family carbohydrate kinase AMIR_RS25080 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS25080 PF00107 Zinc-binding dehydrogenase AMIR_RS25085 PF07690 Major Facilitator Superfamily AMIR_RS25085 PF00083 Sugar (and other) transporter AMIR_RS25090 PF08125 Mannitol dehydrogenase C-terminal domain AMIR_RS25090 PF01232 Mannitol dehydrogenase Rossmann domain AMIR_RS25095 PF13378 Enolase C-terminal domain-like AMIR_RS25095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS25100 PF07729 FCD domain AMIR_RS25100 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS25110 PF03621 MbtH-like protein AMIR_RS25115 PF00501 AMP-binding enzyme AMIR_RS25115 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS25115 PF00668 Condensation domain AMIR_RS25115 PF00550 Phosphopantetheine attachment site AMIR_RS25120 PF01497 Periplasmic binding protein AMIR_RS25125 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS25130 PF00664 ABC transporter transmembrane region AMIR_RS25130 PF00005 ABC transporter AMIR_RS25140 PF00753 Metallo-beta-lactamase superfamily AMIR_RS25140 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMIR_RS25150 PF01593 Flavin containing amine oxidoreductase AMIR_RS25155 PF00331 Glycosyl hydrolase family 10 AMIR_RS25155 PF00553 Cellulose binding domain AMIR_RS25170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS25170 PF03466 LysR substrate binding domain AMIR_RS25175 PF01810 LysE type translocator AMIR_RS25190 PF01614 Bacterial transcriptional regulator AMIR_RS25190 PF09339 IclR helix-turn-helix domain AMIR_RS25195 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS25200 PF12697 Alpha/beta hydrolase family AMIR_RS25205 PF00775 Dioxygenase AMIR_RS25210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMIR_RS25210 PF00775 Dioxygenase AMIR_RS25215 PF01144 Coenzyme A transferase AMIR_RS25220 PF01144 Coenzyme A transferase AMIR_RS25235 PF00672 HAMP domain AMIR_RS25235 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS25240 PF09308 LuxQ, periplasmic AMIR_RS25240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS25240 PF00072 Response regulator receiver domain AMIR_RS25240 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS25245 PF01740 STAS domain AMIR_RS25255 PF02541 Ppx/GppA phosphatase family AMIR_RS25270 PF00583 Acetyltransferase (GNAT) family AMIR_RS25275 PF00296 Luciferase-like monooxygenase AMIR_RS25285 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS25290 PF17676 LD-carboxypeptidase C-terminal domain AMIR_RS25290 PF02016 LD-carboxypeptidase N-terminal domain AMIR_RS25295 PF00106 short chain dehydrogenase AMIR_RS25300 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS25310 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIR_RS25330 PF00128 Alpha amylase, catalytic domain AMIR_RS25330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS25335 PF00128 Alpha amylase, catalytic domain AMIR_RS25340 PF00128 Alpha amylase, catalytic domain AMIR_RS25340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS25350 PF02446 4-alpha-glucanotransferase AMIR_RS25355 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMIR_RS25355 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS25360 PF00578 AhpC/TSA family AMIR_RS25370 PF08525 Opacity-associated protein A N-terminal motif AMIR_RS25370 PF01551 Peptidase family M23 AMIR_RS25370 PF01476 LysM domain AMIR_RS25375 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS25375 PF00912 Transglycosylase AMIR_RS25380 PF00294 pfkB family carbohydrate kinase AMIR_RS25385 PF04542 Sigma-70 region 2 AMIR_RS25385 PF08281 Sigma-70, region 4 AMIR_RS25390 PF00561 alpha/beta hydrolase fold AMIR_RS25400 PF12804 MobA-like NTP transferase domain AMIR_RS25405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS25405 PF03466 LysR substrate binding domain AMIR_RS25415 PF00455 DeoR C terminal sensor domain AMIR_RS25415 PF08220 DeoR-like helix-turn-helix domain AMIR_RS25420 PF13580 SIS domain AMIR_RS25425 PF00664 ABC transporter transmembrane region AMIR_RS25425 PF00005 ABC transporter AMIR_RS25430 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS25440 PF12848 ABC transporter AMIR_RS25440 PF00005 ABC transporter AMIR_RS25455 PF04542 Sigma-70 region 2 AMIR_RS25455 PF08281 Sigma-70, region 4 AMIR_RS25480 PF01966 HD domain AMIR_RS25480 PF13286 Phosphohydrolase-associated domain AMIR_RS25510 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS25515 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS25520 PF00571 CBS domain AMIR_RS25525 PF01883 Iron-sulfur cluster assembly protein AMIR_RS25530 PF01592 NifU-like N terminal domain AMIR_RS25535 PF00266 Aminotransferase class-V AMIR_RS25540 PF00005 ABC transporter AMIR_RS25550 PF01458 Uncharacterized protein family (UPF0051) AMIR_RS25555 PF01458 Uncharacterized protein family (UPF0051) AMIR_RS25580 PF11856 Protein of unknown function (DUF3376) AMIR_RS25580 PF01734 Patatin-like phospholipase AMIR_RS25595 PF00005 ABC transporter AMIR_RS25645 PF03259 Roadblock/LC7 domain AMIR_RS25650 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS25650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS25660 PF00474 Sodium:solute symporter family AMIR_RS25680 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS25680 PF00107 Zinc-binding dehydrogenase AMIR_RS25685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS25705 PF04542 Sigma-70 region 2 AMIR_RS25705 PF08281 Sigma-70, region 4 AMIR_RS25715 PF01040 UbiA prenyltransferase family AMIR_RS25720 PF02780 Transketolase, C-terminal domain AMIR_RS25720 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS25720 PF02779 Transketolase, pyrimidine binding domain AMIR_RS25725 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMIR_RS25730 PF00342 Phosphoglucose isomerase AMIR_RS25735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIR_RS25735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIR_RS25745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMIR_RS25750 PF07730 Histidine kinase AMIR_RS25770 PF03840 Preprotein translocase SecG subunit AMIR_RS25775 PF00121 Triosephosphate isomerase AMIR_RS25780 PF00162 Phosphoglycerate kinase AMIR_RS25785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMIR_RS25785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIR_RS25800 PF10298 WhiA N-terminal LAGLIDADG-like domain AMIR_RS25800 PF02650 WhiA C-terminal HTH domain AMIR_RS25800 PF14527 WhiA LAGLIDADG-like domain AMIR_RS25805 PF01933 Uncharacterised protein family UPF0052 AMIR_RS25810 PF03668 P-loop ATPase protein family AMIR_RS25815 PF08459 UvrC Helix-hairpin-helix N-terminal AMIR_RS25815 PF02151 UvrB/uvrC motif AMIR_RS25815 PF01541 GIY-YIG catalytic domain AMIR_RS25855 PF04542 Sigma-70 region 2 AMIR_RS25855 PF08281 Sigma-70, region 4 AMIR_RS25860 PF04389 Peptidase family M28 AMIR_RS25860 PF02225 PA domain AMIR_RS25865 PF10756 Bacterial PH domain AMIR_RS25870 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMIR_RS25875 PF00925 GTP cyclohydrolase II AMIR_RS25875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMIR_RS25880 PF00677 Lumazine binding domain AMIR_RS25885 PF00834 Ribulose-phosphate 3 epimerase family AMIR_RS25895 PF02441 Flavoprotein AMIR_RS25895 PF04127 DNA / pantothenate metabolism flavoprotein AMIR_RS25900 PF01029 NusB family AMIR_RS25900 PF01189 16S rRNA methyltransferase RsmB/F AMIR_RS25905 PF02911 Formyl transferase, C-terminal domain AMIR_RS25905 PF00551 Formyl transferase AMIR_RS25910 PF01327 Polypeptide deformylase AMIR_RS25950 PF17764 3′ DNA-binding domain (3′BD) AMIR_RS25955 PF02772 S-adenosylmethionine synthetase, central domain AMIR_RS25955 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMIR_RS25955 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMIR_RS25960 PF02441 Flavoprotein AMIR_RS25960 PF04127 DNA / pantothenate metabolism flavoprotein AMIR_RS25965 PF01192 RNA polymerase Rpb6 AMIR_RS25970 PF00625 Guanylate kinase AMIR_RS25980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMIR_RS25985 PF02142 MGS-like domain AMIR_RS25985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIR_RS25985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS25990 PF00117 Glutamine amidotransferase class-I AMIR_RS25990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMIR_RS26000 PF01979 Amidohydrolase family AMIR_RS26005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIR_RS26005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIR_RS26010 PF00156 Phosphoribosyl transferase domain AMIR_RS26020 PF01029 NusB family AMIR_RS26025 PF01132 Elongation factor P (EF-P) OB domain AMIR_RS26025 PF08207 Elongation factor P (EF-P) KOW-like domain AMIR_RS26025 PF09285 Elongation factor P, C-terminal AMIR_RS26030 PF00557 Metallopeptidase family M24 AMIR_RS26030 PF01321 Creatinase/Prolidase N-terminal domain AMIR_RS26040 PF01220 Dehydroquinase class II AMIR_RS26045 PF01761 3-dehydroquinate synthase AMIR_RS26050 PF01202 Shikimate kinase AMIR_RS26055 PF01264 Chorismate synthase AMIR_RS26060 PF01478 Type IV leader peptidase family AMIR_RS26060 PF06750 Bacterial Peptidase A24 N-terminal domain AMIR_RS26065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMIR_RS26070 PF00367 phosphotransferase system, EIIB AMIR_RS26075 PF07702 UTRA domain AMIR_RS26075 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS26080 PF02378 Phosphotransferase system, EIIC AMIR_RS26085 PF00381 PTS HPr component phosphorylation site AMIR_RS26090 PF08501 Shikimate dehydrogenase substrate binding domain AMIR_RS26090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMIR_RS26100 PF03652 Holliday junction resolvase AMIR_RS26105 PF02272 DHHA1 domain AMIR_RS26105 PF01411 tRNA synthetases class II (A) AMIR_RS26105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS26135 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS26135 PF12002 MgsA AAA+ ATPase C terminal AMIR_RS26135 PF16193 AAA C-terminal domain AMIR_RS26145 PF08148 DSHCT (NUC185) domain AMIR_RS26145 PF00271 Helicase conserved C-terminal domain AMIR_RS26145 PF00270 DEAD/DEAH box helicase AMIR_RS26150 PF03704 Bacterial transcriptional activator domain AMIR_RS26150 PF00498 FHA domain AMIR_RS26150 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS26155 PF06737 Transglycosylase-like domain AMIR_RS26165 PF04397 LytTr DNA-binding domain AMIR_RS26165 PF00072 Response regulator receiver domain AMIR_RS26175 PF00474 Sodium:solute symporter family AMIR_RS26180 PF07694 5TMR of 5TMR-LYT AMIR_RS26180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS26180 PF06580 Histidine kinase AMIR_RS26200 PF00149 Calcineurin-like phosphoesterase AMIR_RS26205 PF01648 4'-phosphopantetheinyl transferase superfamily AMIR_RS26205 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AMIR_RS26225 PF01638 HxlR-like helix-turn-helix AMIR_RS26245 PF00293 NUDIX domain AMIR_RS26260 PF00107 Zinc-binding dehydrogenase AMIR_RS26260 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS26265 PF12852 Cupin AMIR_RS26265 PF12833 Helix-turn-helix domain AMIR_RS26290 PF00106 short chain dehydrogenase AMIR_RS26305 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS26305 PF00107 Zinc-binding dehydrogenase AMIR_RS26310 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26315 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26330 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS26340 PF13575 Domain of unknown function (DUF4135) AMIR_RS26340 PF05147 Lanthionine synthetase C-like protein AMIR_RS26355 PF03473 MOSC domain AMIR_RS26355 PF03475 3-alpha domain AMIR_RS26360 PF00248 Aldo/keto reductase family AMIR_RS26370 PF00171 Aldehyde dehydrogenase family AMIR_RS26370 PF01575 MaoC like domain AMIR_RS26375 PF16483 Beta-1,3-glucanase AMIR_RS26375 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS26385 PF03704 Bacterial transcriptional activator domain AMIR_RS26385 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS26385 PF00931 NB-ARC domain AMIR_RS26390 PF01757 Acyltransferase family AMIR_RS26400 PF00664 ABC transporter transmembrane region AMIR_RS26400 PF00005 ABC transporter AMIR_RS26425 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMIR_RS26430 PF00849 RNA pseudouridylate synthase AMIR_RS26440 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIR_RS26460 PF02018 Carbohydrate binding domain AMIR_RS26460 PF02927 Cellulase N-terminal ig-like domain AMIR_RS26460 PF00759 Glycosyl hydrolase family 9 AMIR_RS26465 PF00106 short chain dehydrogenase AMIR_RS26480 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS26485 PF01595 Cyclin M transmembrane N-terminal domain AMIR_RS26485 PF00571 CBS domain AMIR_RS26485 PF03471 Transporter associated domain AMIR_RS26490 PF01595 Cyclin M transmembrane N-terminal domain AMIR_RS26490 PF00571 CBS domain AMIR_RS26505 PF03793 PASTA domain AMIR_RS26505 PF00069 Protein kinase domain AMIR_RS26525 PF02347 Glycine cleavage system P-protein AMIR_RS26530 PF13411 MerR HTH family regulatory protein AMIR_RS26535 PF02577 Bifunctional nuclease AMIR_RS26540 PF00376 MerR family regulatory protein AMIR_RS26545 PF00498 FHA domain AMIR_RS26550 PF01597 Glycine cleavage H-protein AMIR_RS26555 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS26565 PF01740 STAS domain AMIR_RS26570 PF13581 Histidine kinase-like ATPase domain AMIR_RS26575 PF13581 Histidine kinase-like ATPase domain AMIR_RS26580 PF04545 Sigma-70, region 4 AMIR_RS26580 PF04542 Sigma-70 region 2 AMIR_RS26580 PF04539 Sigma-70 region 3 AMIR_RS26585 PF02467 Transcription factor WhiB AMIR_RS26595 PF00248 Aldo/keto reductase family AMIR_RS26615 PF04542 Sigma-70 region 2 AMIR_RS26615 PF04545 Sigma-70, region 4 AMIR_RS26635 PF13185 GAF domain AMIR_RS26635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS26635 PF07730 Histidine kinase AMIR_RS26635 PF13492 GAF domain AMIR_RS26640 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS26640 PF00072 Response regulator receiver domain AMIR_RS26645 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS26645 PF00072 Response regulator receiver domain AMIR_RS26725 PF17758 Proteasomal ATPase OB N-terminal domain AMIR_RS26725 PF16450 Proteasomal ATPase OB C-terminal domain AMIR_RS26725 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS26755 PF04545 Sigma-70, region 4 AMIR_RS26755 PF04542 Sigma-70 region 2 AMIR_RS26755 PF04539 Sigma-70 region 3 AMIR_RS26770 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS26775 PF01740 STAS domain AMIR_RS26790 PF01965 DJ-1/PfpI family AMIR_RS26795 PF01965 DJ-1/PfpI family AMIR_RS26795 PF12833 Helix-turn-helix domain AMIR_RS26800 PF13462 Thioredoxin AMIR_RS26800 PF00069 Protein kinase domain AMIR_RS26820 PF00082 Subtilase family AMIR_RS26835 PF00563 EAL domain AMIR_RS26835 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS26835 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS26845 PF03259 Roadblock/LC7 domain AMIR_RS26860 PF01494 FAD binding domain AMIR_RS26865 PF00005 ABC transporter AMIR_RS26870 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26875 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26885 PF00849 RNA pseudouridylate synthase AMIR_RS26885 PF01479 S4 domain AMIR_RS26890 PF04079 Segregation and condensation complex subunit ScpB AMIR_RS26895 PF02616 Segregation and condensation protein ScpA AMIR_RS26905 PF13614 AAA domain AMIR_RS26910 PF01022 Bacterial regulatory protein, arsR family AMIR_RS26915 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS26915 PF00589 Phage integrase family AMIR_RS26930 PF00293 NUDIX domain AMIR_RS26935 PF06418 CTP synthase N-terminus AMIR_RS26935 PF00117 Glutamine amidotransferase class-I AMIR_RS26940 PF11382 Copper transport outer membrane protein, MctB AMIR_RS26955 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS26960 PF01513 ATP-NAD kinase AMIR_RS26965 PF01728 FtsJ-like methyltransferase AMIR_RS26965 PF01479 S4 domain AMIR_RS26970 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS26970 PF18407 GCN5-related N-acetyltransferase like domain AMIR_RS26995 PF00579 tRNA synthetases class I (W and Y) AMIR_RS27010 PF02245 Methylpurine-DNA glycosylase (MPG) AMIR_RS27015 PF00206 Lyase AMIR_RS27015 PF14698 Argininosuccinate lyase C-terminal AMIR_RS27020 PF00764 Arginosuccinate synthase AMIR_RS27025 PF01316 Arginine repressor, DNA binding domain AMIR_RS27025 PF02863 Arginine repressor, C-terminal domain AMIR_RS27030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIR_RS27030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIR_RS27035 PF00202 Aminotransferase class-III AMIR_RS27040 PF00696 Amino acid kinase family AMIR_RS27045 PF01960 ArgJ family AMIR_RS27050 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIR_RS27050 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS27055 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS27055 PF00107 Zinc-binding dehydrogenase AMIR_RS27065 PF01381 Helix-turn-helix AMIR_RS27075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS27075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS27085 PF03483 B3/4 domain AMIR_RS27085 PF03484 tRNA synthetase B5 domain AMIR_RS27085 PF03147 Ferredoxin-fold anticodon binding domain AMIR_RS27085 PF01588 Putative tRNA binding domain AMIR_RS27085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMIR_RS27090 PF01409 tRNA synthetases class II core domain (F) AMIR_RS27090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMIR_RS27095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS27095 PF00183 Hsp90 protein AMIR_RS27105 PF00072 Response regulator receiver domain AMIR_RS27105 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS27110 PF00672 HAMP domain AMIR_RS27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS27110 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS27115 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS27115 PF00588 SpoU rRNA Methylase family AMIR_RS27120 PF00453 Ribosomal protein L20 AMIR_RS27125 PF01632 Ribosomal protein L35 AMIR_RS27130 PF00707 Translation initiation factor IF-3, C-terminal domain AMIR_RS27130 PF05198 Translation initiation factor IF-3, N-terminal domain AMIR_RS27145 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS27145 PF00931 NB-ARC domain AMIR_RS27145 PF03704 Bacterial transcriptional activator domain AMIR_RS27155 PF09339 IclR helix-turn-helix domain AMIR_RS27155 PF01614 Bacterial transcriptional regulator AMIR_RS27160 PF00294 pfkB family carbohydrate kinase AMIR_RS27170 PF07969 Amidohydrolase family AMIR_RS27175 PF02447 GntP family permease AMIR_RS27180 PF00005 ABC transporter AMIR_RS27180 PF17760 UvrA interaction domain AMIR_RS27180 PF17755 UvrA DNA-binding domain AMIR_RS27195 PF00753 Metallo-beta-lactamase superfamily AMIR_RS27215 PF00155 Aminotransferase class I and II AMIR_RS27220 PF01022 Bacterial regulatory protein, arsR family AMIR_RS27265 PF00089 Trypsin AMIR_RS27270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS27285 PF09594 Glycosyltransferase family 87 AMIR_RS27315 PF07676 WD40-like Beta Propeller Repeat AMIR_RS27315 PF00326 Prolyl oligopeptidase family AMIR_RS27320 PF03741 Integral membrane protein TerC family AMIR_RS27325 PF00005 ABC transporter AMIR_RS27335 PF02151 UvrB/uvrC motif AMIR_RS27335 PF12344 Ultra-violet resistance protein B AMIR_RS27335 PF17757 UvrB interaction domain AMIR_RS27335 PF04851 Type III restriction enzyme, res subunit AMIR_RS27335 PF00271 Helicase conserved C-terminal domain AMIR_RS27355 PF04229 GrpB protein AMIR_RS27355 PF01121 Dephospho-CoA kinase AMIR_RS27365 PF00575 S1 RNA binding domain AMIR_RS27390 PF17934 Tetracyclin repressor-like, C-terminal domain AMIR_RS27390 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS27405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS27405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS27415 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIR_RS27415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIR_RS27415 PF00476 DNA polymerase family A AMIR_RS27420 PF03061 Thioesterase superfamily AMIR_RS27430 PF00005 ABC transporter AMIR_RS27435 PF00005 ABC transporter AMIR_RS27435 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIR_RS27440 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS27440 PF11862 Domain of unknown function (DUF3382) AMIR_RS27445 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS27455 PF00072 Response regulator receiver domain AMIR_RS27455 PF03861 ANTAR domain AMIR_RS27475 PF13380 CoA binding domain AMIR_RS27480 PF01042 Endoribonuclease L-PSP AMIR_RS27485 PF12697 Alpha/beta hydrolase family AMIR_RS27495 PF00805 Pentapeptide repeats (8 copies) AMIR_RS27500 PF16124 RecQ zinc-binding AMIR_RS27500 PF00570 HRDC domain AMIR_RS27500 PF00271 Helicase conserved C-terminal domain AMIR_RS27500 PF09382 RQC domain AMIR_RS27500 PF00270 DEAD/DEAH box helicase AMIR_RS27680 PF17782 DprA winged helix domain AMIR_RS27680 PF02481 DNA recombination-mediator protein A AMIR_RS27685 PF00156 Phosphoribosyl transferase domain AMIR_RS27745 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS27745 PF00293 NUDIX domain AMIR_RS27995 PF02583 Metal-sensitive transcriptional repressor AMIR_RS28000 PF11774 Lsr2 AMIR_RS28005 PF04715 Anthranilate synthase component I, N terminal region AMIR_RS28005 PF00425 chorismate binding enzyme AMIR_RS28005 PF00117 Glutamine amidotransferase class-I AMIR_RS28015 PF08281 Sigma-70, region 4 AMIR_RS28015 PF04542 Sigma-70 region 2 AMIR_RS28020 PF00149 Calcineurin-like phosphoesterase AMIR_RS28025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS28025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS28030 PF02675 S-adenosylmethionine decarboxylase AMIR_RS28040 PF00326 Prolyl oligopeptidase family AMIR_RS28040 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMIR_RS28045 PF00881 Nitroreductase family AMIR_RS28050 PF00464 Serine hydroxymethyltransferase AMIR_RS28055 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS28055 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIR_RS28080 PF02515 CoA-transferase family III AMIR_RS28085 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS28085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS28085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS28095 PF00108 Thiolase, N-terminal domain AMIR_RS28095 PF02803 Thiolase, C-terminal domain AMIR_RS28100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS28100 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS28100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS28120 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS28125 PF00005 ABC transporter AMIR_RS28125 PF02687 FtsX-like permease family AMIR_RS28125 PF12704 MacB-like periplasmic core domain AMIR_RS28130 PF12704 MacB-like periplasmic core domain AMIR_RS28130 PF02687 FtsX-like permease family AMIR_RS28130 PF00005 ABC transporter AMIR_RS28135 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIR_RS28135 PF13191 AAA ATPase domain AMIR_RS28140 PF03704 Bacterial transcriptional activator domain AMIR_RS28140 PF00931 NB-ARC domain AMIR_RS28140 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS28145 PF09335 SNARE associated Golgi protein AMIR_RS28165 PF00484 Carbonic anhydrase AMIR_RS28170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIR_RS28170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS28175 PF04542 Sigma-70 region 2 AMIR_RS28175 PF08281 Sigma-70, region 4 AMIR_RS28190 PF00224 Pyruvate kinase, barrel domain AMIR_RS28190 PF02887 Pyruvate kinase, alpha/beta domain AMIR_RS28215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS28215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMIR_RS28220 PF01645 Conserved region in glutamate synthase AMIR_RS28220 PF00310 Glutamine amidotransferases class-II AMIR_RS28220 PF04898 Glutamate synthase central domain AMIR_RS28220 PF01493 GXGXG motif AMIR_RS28225 PF00375 Sodium:dicarboxylate symporter family AMIR_RS28235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS28235 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS28235 PF00672 HAMP domain AMIR_RS28245 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS28245 PF00072 Response regulator receiver domain AMIR_RS28250 PF01790 Prolipoprotein diacylglyceryl transferase AMIR_RS28255 PF00290 Tryptophan synthase alpha chain AMIR_RS28260 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS28265 PF00218 Indole-3-glycerol phosphate synthase AMIR_RS28275 PF04715 Anthranilate synthase component I, N terminal region AMIR_RS28275 PF00425 chorismate binding enzyme AMIR_RS28280 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28285 PF01502 Phosphoribosyl-AMP cyclohydrolase AMIR_RS28295 PF00977 Histidine biosynthesis protein AMIR_RS28300 PF02661 Fic/DOC family AMIR_RS28310 PF02861 Clp amino terminal domain, pathogenicity island component AMIR_RS28315 PF00977 Histidine biosynthesis protein AMIR_RS28320 PF00117 Glutamine amidotransferase class-I AMIR_RS28330 PF02779 Transketolase, pyrimidine binding domain AMIR_RS28335 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS28340 PF09278 MerR, DNA binding AMIR_RS28340 PF00376 MerR family regulatory protein AMIR_RS28345 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMIR_RS28350 PF00475 Imidazoleglycerol-phosphate dehydratase AMIR_RS28355 PF00155 Aminotransferase class I and II AMIR_RS28360 PF00815 Histidinol dehydrogenase AMIR_RS28365 PF00246 Zinc carboxypeptidase AMIR_RS28370 PF00266 Aminotransferase class-V AMIR_RS28375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS28380 PF00795 Carbon-nitrogen hydrolase AMIR_RS28390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIR_RS28390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMIR_RS28395 PF00890 FAD binding domain AMIR_RS28395 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS28400 PF02445 Quinolinate synthetase A protein AMIR_RS28415 PF07690 Major Facilitator Superfamily AMIR_RS28420 PF07286 Protein of unknown function (DUF1445) AMIR_RS28435 PF06968 Biotin and Thiamin Synthesis associated domain AMIR_RS28435 PF04055 Radical SAM superfamily AMIR_RS28455 PF00202 Aminotransferase class-III AMIR_RS28460 PF14579 Helix-hairpin-helix motif AMIR_RS28460 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMIR_RS28460 PF02811 PHP domain AMIR_RS28460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMIR_RS28470 PF07690 Major Facilitator Superfamily AMIR_RS28475 PF00849 RNA pseudouridylate synthase AMIR_RS28480 PF01252 Signal peptidase (SPase) II AMIR_RS28485 PF00266 Aminotransferase class-V AMIR_RS28490 PF00999 Sodium/hydrogen exchanger family AMIR_RS28490 PF02080 TrkA-C domain AMIR_RS28490 PF03471 Transporter associated domain AMIR_RS28505 PF02594 Uncharacterised ACR, YggU family COG1872 AMIR_RS28510 PF00133 tRNA synthetases class I (I, L, M and V) AMIR_RS28510 PF08264 Anticodon-binding domain of tRNA AMIR_RS28520 PF05103 DivIVA protein AMIR_RS28530 PF04472 Cell division protein SepF AMIR_RS28535 PF01168 Alanine racemase, N-terminal domain AMIR_RS28540 PF02578 Multi-copper polyphenol oxidoreductase laccase AMIR_RS28545 PF00091 Tubulin/FtsZ family, GTPase domain AMIR_RS28545 PF12327 FtsZ family, C-terminal domain AMIR_RS28550 PF08478 POTRA domain, FtsQ-type AMIR_RS28555 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28555 PF08245 Mur ligase middle domain AMIR_RS28555 PF01225 Mur ligase family, catalytic domain AMIR_RS28560 PF04101 Glycosyltransferase family 28 C-terminal domain AMIR_RS28560 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS28565 PF01098 Cell cycle protein AMIR_RS28580 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIR_RS28580 PF17806 Sarcosine oxidase A3 domain AMIR_RS28580 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS28580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS28585 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28585 PF08245 Mur ligase middle domain AMIR_RS28590 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMIR_RS28590 PF00953 Glycosyl transferase family 4 AMIR_RS28595 PF01225 Mur ligase family, catalytic domain AMIR_RS28595 PF08245 Mur ligase middle domain AMIR_RS28595 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28600 PF01225 Mur ligase family, catalytic domain AMIR_RS28600 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28600 PF08245 Mur ligase middle domain AMIR_RS28605 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS28605 PF03717 Penicillin-binding Protein dimerisation domain AMIR_RS28615 PF01795 MraW methylase family AMIR_RS28620 PF02381 MraZ protein, putative antitoxin-like AMIR_RS28625 PF17863 AAA lid domain AMIR_RS28625 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS28655 PF00027 Cyclic nucleotide-binding domain AMIR_RS28655 PF13545 Crp-like helix-turn-helix domain AMIR_RS28660 PF11799 impB/mucB/samB family C-terminal domain AMIR_RS28660 PF00817 impB/mucB/samB family AMIR_RS28670 PF00120 Glutamine synthetase, catalytic domain AMIR_RS28670 PF03951 Glutamine synthetase, beta-Grasp domain AMIR_RS28675 PF08281 Sigma-70, region 4 AMIR_RS28675 PF04542 Sigma-70 region 2 AMIR_RS28685 PF13614 AAA domain AMIR_RS28690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS28690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS28695 PF01180 Dihydroorotate dehydrogenase AMIR_RS28710 PF00860 Permease family AMIR_RS28720 PF04012 PspA/IM30 family AMIR_RS28730 PF02464 Competence-damaged protein AMIR_RS28730 PF00994 Probable molybdopterin binding domain AMIR_RS28730 PF18146 Damage-inducible protein CinA KH domain AMIR_RS28735 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS28740 PF00919 Uncharacterized protein family UPF0004 AMIR_RS28740 PF04055 Radical SAM superfamily AMIR_RS28740 PF18693 TRAM domain AMIR_RS28745 PF00583 Acetyltransferase (GNAT) family AMIR_RS28760 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMIR_RS28760 PF09397 Ftsk gamma domain AMIR_RS28760 PF17854 FtsK alpha domain AMIR_RS28760 PF01580 FtsK/SpoIIIE family AMIR_RS28770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMIR_RS28770 PF17770 Ribonuclease J C-terminal domain AMIR_RS28770 PF12706 Beta-lactamase superfamily domain AMIR_RS28775 PF00701 Dihydrodipicolinate synthetase family AMIR_RS28785 PF00069 Protein kinase domain AMIR_RS28795 PF02511 Thymidylate synthase complementing protein AMIR_RS28810 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28820 PF00248 Aldo/keto reductase family AMIR_RS28825 PF06224 Winged helix DNA-binding domain AMIR_RS28845 PF01113 Dihydrodipicolinate reductase, N-terminus AMIR_RS28845 PF05173 Dihydrodipicolinate reductase, C-terminus AMIR_RS28850 PF05193 Peptidase M16 inactive domain AMIR_RS28850 PF00675 Insulinase (Peptidase family M16) AMIR_RS28855 PF01138 3' exoribonuclease family, domain 1 AMIR_RS28855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMIR_RS28855 PF00013 KH domain AMIR_RS28855 PF00575 S1 RNA binding domain AMIR_RS28860 PF00312 Ribosomal protein S15 AMIR_RS28875 PF01687 Riboflavin kinase AMIR_RS28875 PF06574 FAD synthetase AMIR_RS28880 PF09142 tRNA Pseudouridine synthase II, C terminal AMIR_RS28880 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMIR_RS28880 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMIR_RS28885 PF07690 Major Facilitator Superfamily AMIR_RS28895 PF01368 DHH family AMIR_RS28895 PF02272 DHHA1 domain AMIR_RS28900 PF02033 Ribosome-binding factor A AMIR_RS28910 PF00009 Elongation factor Tu GTP binding domain AMIR_RS28910 PF11987 Translation-initiation factor 2 AMIR_RS28910 PF04760 Translation initiation factor IF-2, N-terminal region AMIR_RS28910 PF11987 Translation-initiation factor 2 AMIR_RS28910 PF04760 Translation initiation factor IF-2, N-terminal region AMIR_RS28910 PF00009 Elongation factor Tu GTP binding domain AMIR_RS28915 PF08529 NusA N-terminal domain AMIR_RS28915 PF13184 NusA-like KH domain AMIR_RS28920 PF17384 RimP C-terminal SH3 domain AMIR_RS28920 PF02576 RimP N-terminal domain AMIR_RS28950 PF01894 Uncharacterised protein family UPF0047 AMIR_RS28970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS28970 PF04073 Aminoacyl-tRNA editing domain AMIR_RS28970 PF03129 Anticodon binding domain AMIR_RS28980 PF03883 Peroxide stress protein YaaA AMIR_RS28985 PF00027 Cyclic nucleotide-binding domain AMIR_RS28985 PF07885 Ion channel AMIR_RS29000 PF00271 Helicase conserved C-terminal domain AMIR_RS29000 PF00270 DEAD/DEAH box helicase AMIR_RS29005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS29005 PF10414 Sirohaem synthase dimerisation region AMIR_RS29010 PF00089 Trypsin AMIR_RS29025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS29030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS29030 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS29035 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMIR_RS29040 PF07728 AAA domain (dynein-related subfamily) AMIR_RS29040 PF13519 von Willebrand factor type A domain AMIR_RS29040 PF17863 AAA lid domain AMIR_RS29045 PF00106 short chain dehydrogenase AMIR_RS29050 PF13305 Tetracyclin repressor-like, C-terminal domain AMIR_RS29050 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS29055 PF00155 Aminotransferase class I and II AMIR_RS29060 PF13673 Acetyltransferase (GNAT) domain AMIR_RS29065 PF00089 Trypsin AMIR_RS29070 PF01810 LysE type translocator AMIR_RS29075 PF00089 Trypsin AMIR_RS29080 PF00089 Trypsin AMIR_RS29085 PF01435 Peptidase family M48 AMIR_RS29095 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS29100 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS29100 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIR_RS29100 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMIR_RS29110 PF01734 Patatin-like phospholipase AMIR_RS29115 PF01522 Polysaccharide deacetylase AMIR_RS29120 PF01161 Phosphatidylethanolamine-binding protein AMIR_RS29125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS29125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS29130 PF07690 Major Facilitator Superfamily AMIR_RS29135 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS29135 PF07729 FCD domain AMIR_RS29145 PF00892 EamA-like transporter family AMIR_RS29150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS29150 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS29160 PF00557 Metallopeptidase family M24 AMIR_RS29165 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS29175 PF04551 GcpE protein AMIR_RS29180 PF17820 PDZ domain AMIR_RS29180 PF02163 Peptidase family M50 AMIR_RS29185 PF13288 DXP reductoisomerase C-terminal domain AMIR_RS29185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMIR_RS29185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMIR_RS29200 PF00072 Response regulator receiver domain AMIR_RS29200 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS29205 PF07730 Histidine kinase AMIR_RS29210 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS29215 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS29220 PF13416 Bacterial extracellular solute-binding protein AMIR_RS29225 PF08402 TOBE domain AMIR_RS29225 PF00005 ABC transporter AMIR_RS29235 PF03793 PASTA domain AMIR_RS29235 PF00069 Protein kinase domain AMIR_RS29245 PF04055 Radical SAM superfamily AMIR_RS29250 PF03551 Transcriptional regulator PadR-like family AMIR_RS29255 PF00248 Aldo/keto reductase family AMIR_RS29260 PF03551 Transcriptional regulator PadR-like family AMIR_RS29260 PF13847 Methyltransferase domain AMIR_RS29275 PF01765 Ribosome recycling factor AMIR_RS29280 PF00696 Amino acid kinase family AMIR_RS29285 PF00889 Elongation factor TS AMIR_RS29290 PF00318 Ribosomal protein S2 AMIR_RS29300 PF04542 Sigma-70 region 2 AMIR_RS29300 PF04539 Sigma-70 region 3 AMIR_RS29300 PF04545 Sigma-70, region 4 AMIR_RS29305 PF00589 Phage integrase family AMIR_RS29305 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS29310 PF02481 DNA recombination-mediator protein A AMIR_RS29310 PF17782 DprA winged helix domain AMIR_RS29315 PF01078 Magnesium chelatase, subunit ChlI AMIR_RS29315 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMIR_RS29320 PF02021 Uncharacterised protein family UPF0102 AMIR_RS29325 PF10611 Protein of unknown function (DUF2469) AMIR_RS29330 PF01351 Ribonuclease HII AMIR_RS29335 PF10502 Signal peptidase, peptidase S26 AMIR_RS29340 PF10502 Signal peptidase, peptidase S26 AMIR_RS29345 PF01245 Ribosomal protein L19 AMIR_RS29350 PF01746 tRNA (Guanine-1)-methyltransferase AMIR_RS29355 PF05239 PRC-barrel domain AMIR_RS29355 PF01782 RimM N-terminal domain AMIR_RS29365 PF00886 Ribosomal protein S16 AMIR_RS29370 PF03746 LamB/YcsF family AMIR_RS29380 PF01979 Amidohydrolase family AMIR_RS29385 PF00448 SRP54-type protein, GTPase domain AMIR_RS29385 PF02881 SRP54-type protein, helical bundle domain AMIR_RS29385 PF02978 Signal peptide binding domain AMIR_RS29395 PF08335 GlnD PII-uridylyltransferase AMIR_RS29395 PF01966 HD domain AMIR_RS29400 PF00543 Nitrogen regulatory protein P-II AMIR_RS29405 PF00909 Ammonium Transporter Family AMIR_RS29410 PF00561 alpha/beta hydrolase fold AMIR_RS29410 PF08386 TAP-like protein AMIR_RS29415 PF03561 Allantoicase repeat AMIR_RS29420 PF01979 Amidohydrolase family AMIR_RS29430 PF01014 Uricase AMIR_RS29445 PF01274 Malate synthase AMIR_RS29450 PF09339 IclR helix-turn-helix domain AMIR_RS29450 PF01614 Bacterial transcriptional regulator AMIR_RS29460 PF00448 SRP54-type protein, GTPase domain AMIR_RS29460 PF02881 SRP54-type protein, helical bundle domain AMIR_RS29465 PF03702 Anhydro-N-acetylmuramic acid kinase AMIR_RS29475 PF00583 Acetyltransferase (GNAT) family AMIR_RS29495 PF06470 SMC proteins Flexible Hinge Domain AMIR_RS29495 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS29510 PF00708 Acylphosphatase AMIR_RS29530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS29535 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS29535 PF00072 Response regulator receiver domain AMIR_RS29545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS29545 PF06827 Zinc finger found in FPG and IleRS AMIR_RS29545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS29555 PF14622 Ribonuclease-III-like AMIR_RS29555 PF00035 Double-stranded RNA binding motif AMIR_RS29560 PF01783 Ribosomal L32p protein family AMIR_RS29565 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMIR_RS29575 PF01467 Cytidylyltransferase-like AMIR_RS29585 PF12706 Beta-lactamase superfamily domain AMIR_RS29600 PF02785 Biotin carboxylase C-terminal domain AMIR_RS29600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS29600 PF00364 Biotin-requiring enzyme AMIR_RS29600 PF00289 Biotin carboxylase, N-terminal domain AMIR_RS29600 PF00682 HMGL-like AMIR_RS29600 PF02436 Conserved carboxylase domain AMIR_RS29620 PF00271 Helicase conserved C-terminal domain AMIR_RS29620 PF00270 DEAD/DEAH box helicase AMIR_RS29620 PF17191 RecG wedge domain AMIR_RS29625 PF13684 Dihydroxyacetone kinase family AMIR_RS29625 PF02734 DAK2 domain AMIR_RS29630 PF00830 Ribosomal L28 family AMIR_RS29645 PF03167 Uracil DNA glycosylase superfamily AMIR_RS29650 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS29660 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS29660 PF02769 AIR synthase related protein, C-terminal domain AMIR_RS29675 PF01820 D-ala D-ala ligase N-terminus AMIR_RS29675 PF07478 D-ala D-ala ligase C-terminus AMIR_RS29690 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS29715 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS29720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMIR_RS29720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMIR_RS29730 PF12804 MobA-like NTP transferase domain AMIR_RS29740 PF17941 Polyphosphate kinase C-terminal domain 1 AMIR_RS29740 PF13089 Polyphosphate kinase N-terminal domain AMIR_RS29740 PF13090 Polyphosphate kinase C-terminal domain 2 AMIR_RS29740 PF02503 Polyphosphate kinase middle domain AMIR_RS29745 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS29745 PF00293 NUDIX domain AMIR_RS29750 PF00216 Bacterial DNA-binding protein AMIR_RS29755 PF00694 Aconitase C-terminal domain AMIR_RS29760 PF00330 Aconitase family (aconitate hydratase) AMIR_RS29765 PF01614 Bacterial transcriptional regulator AMIR_RS29765 PF09339 IclR helix-turn-helix domain AMIR_RS29790 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMIR_RS29795 PF01494 FAD binding domain AMIR_RS29800 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIR_RS29810 PF08502 LeuA allosteric (dimerisation) domain AMIR_RS29810 PF00682 HMGL-like AMIR_RS29815 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIR_RS29820 PF05922 Peptidase inhibitor I9 AMIR_RS29820 PF02225 PA domain AMIR_RS29820 PF00082 Subtilase family AMIR_RS29820 PF13860 FlgD Ig-like domain AMIR_RS29825 PF01842 ACT domain AMIR_RS29825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS29825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS29835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMIR_RS29835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMIR_RS29840 PF10369 Small subunit of acetolactate synthase AMIR_RS29845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS29845 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS29845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS29860 PF00920 Dehydratase family AMIR_RS29875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS29900 PF02934 GatB/GatE catalytic domain AMIR_RS29900 PF02637 GatB domain AMIR_RS29910 PF01425 Amidase AMIR_RS29915 PF02686 Glu-tRNAGln amidotransferase C subunit AMIR_RS29930 PF12826 Helix-hairpin-helix motif AMIR_RS29930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMIR_RS29930 PF00533 BRCA1 C Terminus (BRCT) domain AMIR_RS29930 PF01653 NAD-dependent DNA ligase adenylation domain AMIR_RS29930 PF03120 NAD-dependent DNA ligase OB-fold domain AMIR_RS29940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS29940 PF03466 LysR substrate binding domain AMIR_RS29945 PF03601 Conserved hypothetical protein 698 AMIR_RS29970 PF00266 Aminotransferase class-V AMIR_RS29975 PF07690 Major Facilitator Superfamily AMIR_RS29980 PF01553 Acyltransferase AMIR_RS29990 PF01012 Electron transfer flavoprotein domain AMIR_RS29990 PF00766 Electron transfer flavoprotein FAD-binding domain AMIR_RS29995 PF01012 Electron transfer flavoprotein domain AMIR_RS30000 PF02645 Uncharacterised protein, DegV family COG1307 AMIR_RS30015 PF08241 Methyltransferase domain AMIR_RS30020 PF03065 Glycosyl hydrolase family 57 AMIR_RS30020 PF09210 Domain of unknown function (DUF1957) AMIR_RS30025 PF13439 Glycosyltransferase Family 4 AMIR_RS30025 PF00534 Glycosyl transferases group 1 AMIR_RS30040 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS30045 PF01156 Inosine-uridine preferring nucleoside hydrolase AMIR_RS30050 PF18096 THUMP domain-like AMIR_RS30055 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS30060 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS30065 PF00005 ABC transporter AMIR_RS30070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS30070 PF00128 Alpha amylase, catalytic domain AMIR_RS30090 PF11897 Protein of unknown function (DUF3417) AMIR_RS30090 PF00343 Carbohydrate phosphorylase AMIR_RS30095 PF11896 Domain of unknown function (DUF3416) AMIR_RS30095 PF00128 Alpha amylase, catalytic domain AMIR_RS30100 PF00128 Alpha amylase, catalytic domain AMIR_RS30100 PF16657 Maltogenic Amylase, C-terminal domain AMIR_RS30105 PF18085 Maltokinase N-terminal cap domain AMIR_RS30110 PF02806 Alpha amylase, C-terminal all-beta domain AMIR_RS30110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS30110 PF00128 Alpha amylase, catalytic domain AMIR_RS30115 PF04228 Putative neutral zinc metallopeptidase AMIR_RS30130 PF00085 Thioredoxin AMIR_RS30140 PF01910 Thiamine-binding protein AMIR_RS30145 PF01047 MarR family AMIR_RS30155 PF12823 Domain of unknown function (DUF3817) AMIR_RS30155 PF03176 MMPL family AMIR_RS30160 PF00005 ABC transporter AMIR_RS30185 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS30195 PF00005 ABC transporter AMIR_RS30200 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS30205 PF13407 Periplasmic binding protein domain AMIR_RS30215 PF00561 alpha/beta hydrolase fold AMIR_RS30220 PF00561 alpha/beta hydrolase fold AMIR_RS30225 PF00072 Response regulator receiver domain AMIR_RS30225 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS30230 PF07730 Histidine kinase AMIR_RS30230 PF13492 GAF domain AMIR_RS30230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS30230 PF13185 GAF domain AMIR_RS30255 PF02803 Thiolase, C-terminal domain AMIR_RS30255 PF00108 Thiolase, N-terminal domain AMIR_RS30295 PF05524 PEP-utilising enzyme, N-terminal AMIR_RS30295 PF03610 PTS system fructose IIA component AMIR_RS30295 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS30295 PF00381 PTS HPr component phosphorylation site AMIR_RS30300 PF02734 DAK2 domain AMIR_RS30305 PF02733 Dak1 domain AMIR_RS30310 PF00171 Aldehyde dehydrogenase family AMIR_RS30325 PF00474 Sodium:solute symporter family AMIR_RS30355 PF01939 Endonuclease NucS AMIR_RS30370 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS30375 PF00857 Isochorismatase family AMIR_RS30395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS30400 PF01923 Cobalamin adenosyltransferase AMIR_RS30410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMIR_RS30415 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS30415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30420 PF00231 ATP synthase AMIR_RS30425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30425 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS30425 PF00306 ATP synthase alpha/beta chain, C terminal domain AMIR_RS30430 PF00213 ATP synthase delta (OSCP) subunit AMIR_RS30435 PF00430 ATP synthase B/B' CF(0) AMIR_RS30440 PF00137 ATP synthase subunit C AMIR_RS30445 PF00119 ATP synthase A chain AMIR_RS30460 PF00953 Glycosyl transferase family 4 AMIR_RS30465 PF01300 Telomere recombination AMIR_RS30470 PF17827 PrmC N-terminal domain AMIR_RS30470 PF05175 Methyltransferase small domain AMIR_RS30475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS30475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS30490 PF03462 PCRF domain AMIR_RS30490 PF00472 RF-1 domain AMIR_RS30495 PF01197 Ribosomal protein L31 AMIR_RS30505 PF07497 Rho termination factor, RNA-binding domain AMIR_RS30505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30505 PF07498 Rho termination factor, N-terminal domain AMIR_RS30510 PF00288 GHMP kinases N terminal domain AMIR_RS30515 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS30520 PF01842 ACT domain AMIR_RS30520 PF00742 Homoserine dehydrogenase AMIR_RS30520 PF03447 Homoserine dehydrogenase, NAD binding domain AMIR_RS30525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS30525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS30530 PF05746 DALR anticodon binding domain AMIR_RS30530 PF00750 tRNA synthetases class I (R) AMIR_RS30530 PF03485 Arginyl tRNA synthetase N terminal domain AMIR_RS30545 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMIR_RS30545 PF07971 Glycosyl hydrolase family 92 AMIR_RS30550 PF01545 Cation efflux family AMIR_RS30575 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30575 PF03704 Bacterial transcriptional activator domain AMIR_RS30575 PF00931 NB-ARC domain AMIR_RS30580 PF00561 alpha/beta hydrolase fold AMIR_RS30615 PF00296 Luciferase-like monooxygenase AMIR_RS30620 PF03193 RsgA GTPase AMIR_RS30630 PF00248 Aldo/keto reductase family AMIR_RS30635 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS30645 PF16875 Glycosyl hydrolase family 36 N-terminal domain AMIR_RS30645 PF16874 Glycosyl hydrolase family 36 C-terminal domain AMIR_RS30660 PF00005 ABC transporter AMIR_RS30660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS30665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS30665 PF00005 ABC transporter AMIR_RS30670 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS30675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS30685 PF00296 Luciferase-like monooxygenase AMIR_RS30690 PF00296 Luciferase-like monooxygenase AMIR_RS30695 PF01266 FAD dependent oxidoreductase AMIR_RS30700 PF05175 Methyltransferase small domain AMIR_RS30700 PF17827 PrmC N-terminal domain AMIR_RS30705 PF08281 Sigma-70, region 4 AMIR_RS30705 PF04542 Sigma-70 region 2 AMIR_RS30710 PF03795 YCII-related domain AMIR_RS30730 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS30730 PF00107 Zinc-binding dehydrogenase AMIR_RS30735 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS30750 PF00480 ROK family AMIR_RS30750 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMIR_RS30755 PF00144 Beta-lactamase AMIR_RS30760 PF00553 Cellulose binding domain AMIR_RS30760 PF00704 Glycosyl hydrolases family 18 AMIR_RS30760 PF00041 Fibronectin type III domain AMIR_RS30765 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMIR_RS30765 PF13538 UvrD-like helicase C-terminal domain AMIR_RS30765 PF14490 Helix-hairpin-helix containing domain AMIR_RS30770 PF00072 Response regulator receiver domain AMIR_RS30770 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30775 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS30775 PF00672 HAMP domain AMIR_RS30775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS30795 PF00082 Subtilase family AMIR_RS30800 PF00890 FAD binding domain AMIR_RS30805 PF03466 LysR substrate binding domain AMIR_RS30805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS30815 PF01613 Flavin reductase like domain AMIR_RS30835 PF03704 Bacterial transcriptional activator domain AMIR_RS30835 PF00931 NB-ARC domain AMIR_RS30835 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30850 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS30850 PF00563 EAL domain AMIR_RS30850 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS30855 PF00595 PDZ domain AMIR_RS30860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS30860 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS30860 PF18158 Adaptive response protein AidB N-terminal domain AMIR_RS30865 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS30875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS30875 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS30875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS30880 PF00289 Biotin carboxylase, N-terminal domain AMIR_RS30880 PF02785 Biotin carboxylase C-terminal domain AMIR_RS30880 PF00364 Biotin-requiring enzyme AMIR_RS30880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS30885 PF01039 Carboxyl transferase domain AMIR_RS30890 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS30905 PF00072 Response regulator receiver domain AMIR_RS30905 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS30925 PF00561 alpha/beta hydrolase fold AMIR_RS30930 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS30935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS30935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS30955 PF00255 Glutathione peroxidase AMIR_RS30960 PF03313 Serine dehydratase alpha chain AMIR_RS30960 PF03315 Serine dehydratase beta chain AMIR_RS30965 PF01597 Glycine cleavage H-protein AMIR_RS30970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS30970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS30980 PF00005 ABC transporter AMIR_RS30990 PF00005 ABC transporter AMIR_RS30990 PF00664 ABC transporter transmembrane region AMIR_RS30995 PF02779 Transketolase, pyrimidine binding domain AMIR_RS30995 PF16078 2-oxoglutarate dehydrogenase N-terminus AMIR_RS30995 PF00676 Dehydrogenase E1 component AMIR_RS30995 PF16870 2-oxoglutarate dehydrogenase C-terminal AMIR_RS30995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS31010 PF00248 Aldo/keto reductase family AMIR_RS31025 PF00931 NB-ARC domain AMIR_RS31025 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31025 PF03704 Bacterial transcriptional activator domain AMIR_RS31040 PF01979 Amidohydrolase family AMIR_RS31045 PF01979 Amidohydrolase family AMIR_RS31050 PF07687 Peptidase dimerisation domain AMIR_RS31050 PF01546 Peptidase family M20/M25/M40 AMIR_RS31055 PF17392 Urocanase C-terminal domain AMIR_RS31055 PF01175 Urocanase Rossmann-like domain AMIR_RS31055 PF17391 Urocanase N-terminal domain AMIR_RS31060 PF00221 Aromatic amino acid lyase AMIR_RS31075 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS31080 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS31085 PF00571 CBS domain AMIR_RS31085 PF00005 ABC transporter AMIR_RS31120 PF08448 PAS fold AMIR_RS31120 PF00563 EAL domain AMIR_RS31120 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS31120 PF08447 PAS fold AMIR_RS31125 PF00390 Malic enzyme, N-terminal domain AMIR_RS31125 PF03949 Malic enzyme, NAD binding domain AMIR_RS31130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIR_RS31140 PF09055 Nickel-containing superoxide dismutase AMIR_RS31150 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS31175 PF00781 Diacylglycerol kinase catalytic domain AMIR_RS31180 PF02467 Transcription factor WhiB AMIR_RS31185 PF07568 Histidine kinase AMIR_RS31185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31185 PF12282 Signal transduction histidine kinase AMIR_RS31190 PF13490 Putative zinc-finger AMIR_RS31195 PF04542 Sigma-70 region 2 AMIR_RS31195 PF08281 Sigma-70, region 4 AMIR_RS31200 PF04073 Aminoacyl-tRNA editing domain AMIR_RS31210 PF02586 SOS response associated peptidase (SRAP) AMIR_RS31215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS31220 PF03193 RsgA GTPase AMIR_RS31235 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AMIR_RS31245 PF00588 SpoU rRNA Methylase family AMIR_RS31245 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS31250 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS31260 PF07516 SecA Wing and Scaffold domain AMIR_RS31260 PF01043 SecA preprotein cross-linking domain AMIR_RS31260 PF07517 SecA DEAD-like domain AMIR_RS31265 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMIR_RS31265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMIR_RS31275 PF10647 Lipoprotein LpqB beta-propeller domain AMIR_RS31275 PF10646 Sporulation and spore germination AMIR_RS31280 PF00672 HAMP domain AMIR_RS31280 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS31280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31285 PF00072 Response regulator receiver domain AMIR_RS31285 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31290 PF02223 Thymidylate kinase AMIR_RS31335 PF05221 S-adenosyl-L-homocysteine hydrolase AMIR_RS31335 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS31340 PF13520 Amino acid permease AMIR_RS31350 PF01238 Phosphomannose isomerase type I AMIR_RS31365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS31365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS31365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS31365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS31385 PF02467 Transcription factor WhiB AMIR_RS31395 PF01933 Uncharacterised protein family UPF0052 AMIR_RS31400 PF01996 F420-0:Gamma-glutamyl ligase AMIR_RS31400 PF00881 Nitroreductase family AMIR_RS31415 PF00483 Nucleotidyl transferase AMIR_RS31435 PF00534 Glycosyl transferases group 1 AMIR_RS31435 PF13439 Glycosyltransferase Family 4 AMIR_RS31455 PF13439 Glycosyltransferase Family 4 AMIR_RS31455 PF00534 Glycosyl transferases group 1 AMIR_RS31460 PF04321 RmlD substrate binding domain AMIR_RS31465 PF16363 GDP-mannose 4,6 dehydratase AMIR_RS31470 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS31470 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS31475 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS31475 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS31485 PF07681 DoxX AMIR_RS31510 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS31510 PF07702 UTRA domain AMIR_RS31540 PF00589 Phage integrase family AMIR_RS31540 PF12167 Arm DNA-binding domain AMIR_RS31545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS31545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS31545 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS31550 PF00731 AIR carboxylase AMIR_RS31555 PF02222 ATP-grasp domain AMIR_RS31555 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMIR_RS31565 PF08402 TOBE domain AMIR_RS31565 PF00005 ABC transporter AMIR_RS31570 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS31570 PF07729 FCD domain AMIR_RS31610 PF00459 Inositol monophosphatase family AMIR_RS31615 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31615 PF00072 Response regulator receiver domain AMIR_RS31620 PF00672 HAMP domain AMIR_RS31620 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS31620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31655 PF00682 HMGL-like AMIR_RS31665 PF02237 Biotin protein ligase C terminal domain AMIR_RS31665 PF08279 HTH domain AMIR_RS31665 PF03099 Biotin/lipoate A/B protein ligase family AMIR_RS31670 PF01039 Carboxyl transferase domain AMIR_RS31685 PF02545 Maf-like protein AMIR_RS31690 PF00375 Sodium:dicarboxylate symporter family AMIR_RS31700 PF00289 Biotin carboxylase, N-terminal domain AMIR_RS31700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS31700 PF02785 Biotin carboxylase C-terminal domain AMIR_RS31700 PF00364 Biotin-requiring enzyme AMIR_RS31740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS31740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS31750 PF00072 Response regulator receiver domain AMIR_RS31750 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS31755 PF07730 Histidine kinase AMIR_RS31760 PF00005 ABC transporter AMIR_RS31770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS31770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS31775 PF00230 Major intrinsic protein AMIR_RS31780 PF01266 FAD dependent oxidoreductase AMIR_RS31780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMIR_RS31795 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS31795 PF01546 Peptidase family M20/M25/M40 AMIR_RS31815 PF01642 Methylmalonyl-CoA mutase AMIR_RS31815 PF02310 B12 binding domain AMIR_RS31820 PF01642 Methylmalonyl-CoA mutase AMIR_RS31825 PF00069 Protein kinase domain AMIR_RS31830 PF01048 Phosphorylase superfamily AMIR_RS31835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS31835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS31835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS31835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS31850 PF13411 MerR HTH family regulatory protein AMIR_RS31855 PF02661 Fic/DOC family AMIR_RS31875 PF00805 Pentapeptide repeats (8 copies) AMIR_RS31875 PF05729 NACHT domain AMIR_RS31875 PF00400 WD domain, G-beta repeat AMIR_RS31885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS31885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS31905 PF00931 NB-ARC domain AMIR_RS31905 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31905 PF03704 Bacterial transcriptional activator domain AMIR_RS31930 PF00877 NlpC/P60 family AMIR_RS31950 PF00962 Adenosine/AMP deaminase AMIR_RS31965 PF00591 Glycosyl transferase family, a/b domain AMIR_RS31965 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS31965 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS31970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS31975 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS31980 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS31985 PF00005 ABC transporter AMIR_RS31990 PF02608 ABC transporter substrate-binding protein PnrA-like AMIR_RS32030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMIR_RS32040 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS32040 PF00890 FAD binding domain AMIR_RS32045 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIR_RS32050 PF00768 D-alanyl-D-alanine carboxypeptidase AMIR_RS32065 PF03631 Virulence factor BrkB AMIR_RS32070 PF00579 tRNA synthetases class I (W and Y) AMIR_RS32080 PF04055 Radical SAM superfamily AMIR_RS32095 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS32110 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIR_RS32130 PF00226 DnaJ domain AMIR_RS32130 PF01556 DnaJ C terminal domain AMIR_RS32130 PF00684 DnaJ central domain AMIR_RS32135 PF00069 Protein kinase domain AMIR_RS32135 PF13191 AAA ATPase domain AMIR_RS32155 PF00005 ABC transporter AMIR_RS32170 PF13305 Tetracyclin repressor-like, C-terminal domain AMIR_RS32170 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS32180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMIR_RS32180 PF00056 lactate/malate dehydrogenase, NAD binding domain AMIR_RS32210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMIR_RS32210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMIR_RS32225 PF02142 MGS-like domain AMIR_RS32225 PF01808 AICARFT/IMPCHase bienzyme AMIR_RS32230 PF00551 Formyl transferase AMIR_RS32245 PF00549 CoA-ligase AMIR_RS32245 PF02629 CoA binding domain AMIR_RS32250 PF00549 CoA-ligase AMIR_RS32250 PF08442 ATP-grasp domain AMIR_RS32260 PF01551 Peptidase family M23 AMIR_RS32270 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS32270 PF13361 UvrD-like helicase C-terminal domain AMIR_RS32275 PF01817 Chorismate mutase type II AMIR_RS32280 PF00850 Histone deacetylase domain AMIR_RS32305 PF03793 PASTA domain AMIR_RS32305 PF00069 Protein kinase domain AMIR_RS32310 PF00069 Protein kinase domain AMIR_RS32315 PF03466 LysR substrate binding domain AMIR_RS32315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS32320 PF00892 EamA-like transporter family AMIR_RS32325 PF04686 Streptomyces sporulation and cell division protein, SsgA AMIR_RS32330 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS32330 PF00072 Response regulator receiver domain AMIR_RS32350 PF02540 NAD synthase AMIR_RS32350 PF00117 Glutamine amidotransferase class-I AMIR_RS32350 PF00958 GMP synthase C terminal domain AMIR_RS32360 PF00171 Aldehyde dehydrogenase family AMIR_RS32365 PF05199 GMC oxidoreductase AMIR_RS32375 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS32380 PF00571 CBS domain AMIR_RS32380 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS32385 PF17252 Family of unknown function (DUF5319) AMIR_RS32395 PF08281 Sigma-70, region 4 AMIR_RS32395 PF04542 Sigma-70 region 2 AMIR_RS32400 PF00072 Response regulator receiver domain AMIR_RS32400 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS32415 PF02467 Transcription factor WhiB AMIR_RS32420 PF00118 TCP-1/cpn60 chaperonin family AMIR_RS32425 PF00166 Chaperonin 10 Kd subunit AMIR_RS32435 PF00814 Glycoprotease family AMIR_RS32440 PF00583 Acetyltransferase (GNAT) family AMIR_RS32445 PF00814 Glycoprotease family AMIR_RS32455 PF00085 Thioredoxin AMIR_RS32460 PF00501 AMP-binding enzyme AMIR_RS32460 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS32470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMIR_RS32480 PF00842 Alanine racemase, C-terminal domain AMIR_RS32480 PF01168 Alanine racemase, N-terminal domain AMIR_RS32485 PF03853 YjeF-related protein N-terminus AMIR_RS32485 PF01256 Carbohydrate kinase AMIR_RS32490 PF01380 SIS domain AMIR_RS32495 PF12695 Alpha/beta hydrolase family AMIR_RS32515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS32515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS32515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS32515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS32520 PF00380 Ribosomal protein S9/S16 AMIR_RS32525 PF00572 Ribosomal protein L13 AMIR_RS32545 PF00012 Hsp70 protein AMIR_RS32555 PF01580 FtsK/SpoIIIE family AMIR_RS32560 PF08817 WXG100 protein secretion system (Wss), protein YukD AMIR_RS32565 PF00082 Subtilase family AMIR_RS32580 PF05108 Type VII secretion system ESX-1, transport TM domain B AMIR_RS32595 PF04151 Bacterial pre-peptidase C-terminal domain AMIR_RS32595 PF00082 Subtilase family AMIR_RS32595 PF05922 Peptidase inhibitor I9 AMIR_RS32600 PF01416 tRNA pseudouridine synthase AMIR_RS32605 PF01196 Ribosomal protein L17 AMIR_RS32610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMIR_RS32610 PF01000 RNA polymerase Rpb3/RpoA insert domain AMIR_RS32610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMIR_RS32615 PF00163 Ribosomal protein S4/S9 N-terminal domain AMIR_RS32615 PF01479 S4 domain AMIR_RS32620 PF00411 Ribosomal protein S11 AMIR_RS32625 PF00416 Ribosomal protein S13/S18 AMIR_RS32630 PF00444 Ribosomal protein L36 AMIR_RS32635 PF01176 Translation initiation factor 1A / IF-1 AMIR_RS32650 PF00557 Metallopeptidase family M24 AMIR_RS32660 PF00344 SecY translocase AMIR_RS32665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMIR_RS32670 PF00327 Ribosomal protein L30p/L7e AMIR_RS32675 PF00333 Ribosomal protein S5, N-terminal domain AMIR_RS32675 PF03719 Ribosomal protein S5, C-terminal domain AMIR_RS32680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMIR_RS32685 PF00347 Ribosomal protein L6 AMIR_RS32690 PF00410 Ribosomal protein S8 AMIR_RS32695 PF00253 Ribosomal protein S14p/S29e AMIR_RS32700 PF00673 ribosomal L5P family C-terminus AMIR_RS32700 PF00281 Ribosomal protein L5 AMIR_RS32705 PF00467 KOW motif AMIR_RS32705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMIR_RS32710 PF00238 Ribosomal protein L14p/L23e AMIR_RS32715 PF00366 Ribosomal protein S17 AMIR_RS32720 PF00831 Ribosomal L29 protein AMIR_RS32725 PF00252 Ribosomal protein L16p/L10e AMIR_RS32730 PF07650 KH domain AMIR_RS32730 PF00189 Ribosomal protein S3, C-terminal domain AMIR_RS32735 PF00237 Ribosomal protein L22p/L17e AMIR_RS32740 PF00203 Ribosomal protein S19 AMIR_RS32745 PF03947 Ribosomal Proteins L2, C-terminal domain AMIR_RS32745 PF00181 Ribosomal Proteins L2, RNA binding domain AMIR_RS32750 PF00276 Ribosomal protein L23 AMIR_RS32755 PF00573 Ribosomal protein L4/L1 family AMIR_RS32760 PF00297 Ribosomal protein L3 AMIR_RS32765 PF00338 Ribosomal protein S10p/S20e AMIR_RS32770 PF00009 Elongation factor Tu GTP binding domain AMIR_RS32770 PF03143 Elongation factor Tu C-terminal domain AMIR_RS32770 PF03144 Elongation factor Tu domain 2 AMIR_RS32775 PF03144 Elongation factor Tu domain 2 AMIR_RS32775 PF00009 Elongation factor Tu GTP binding domain AMIR_RS32775 PF00679 Elongation factor G C-terminus AMIR_RS32775 PF14492 Elongation Factor G, domain II AMIR_RS32775 PF03764 Elongation factor G, domain IV AMIR_RS32780 PF00177 Ribosomal protein S7p/S5e AMIR_RS32785 PF00164 Ribosomal protein S12/S23 AMIR_RS32805 PF01636 Phosphotransferase enzyme family AMIR_RS32805 PF18085 Maltokinase N-terminal cap domain AMIR_RS32815 PF05000 RNA polymerase Rpb1, domain 4 AMIR_RS32815 PF04983 RNA polymerase Rpb1, domain 3 AMIR_RS32815 PF04998 RNA polymerase Rpb1, domain 5 AMIR_RS32815 PF00623 RNA polymerase Rpb1, domain 2 AMIR_RS32815 PF04997 RNA polymerase Rpb1, domain 1 AMIR_RS32820 PF00562 RNA polymerase Rpb2, domain 6 AMIR_RS32820 PF10385 RNA polymerase beta subunit external 1 domain AMIR_RS32820 PF04565 RNA polymerase Rpb2, domain 3 AMIR_RS32820 PF04560 RNA polymerase Rpb2, domain 7 AMIR_RS32820 PF04563 RNA polymerase beta subunit AMIR_RS32820 PF04561 RNA polymerase Rpb2, domain 2 AMIR_RS32850 PF02405 Permease MlaE AMIR_RS32860 PF00005 ABC transporter AMIR_RS32865 PF16320 Ribosomal protein L7/L12 dimerisation domain AMIR_RS32865 PF00542 Ribosomal protein L7/L12 C-terminal domain AMIR_RS32870 PF00466 Ribosomal protein L10 AMIR_RS32880 PF00687 Ribosomal protein L1p/L10e family AMIR_RS32885 PF00298 Ribosomal protein L11, RNA binding domain AMIR_RS32885 PF03946 Ribosomal protein L11, N-terminal domain AMIR_RS32890 PF02357 Transcription termination factor nusG AMIR_RS32895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMIR_RS32905 PF00155 Aminotransferase class I and II AMIR_RS32920 PF01575 MaoC like domain AMIR_RS32925 PF13452 N-terminal half of MaoC dehydratase AMIR_RS32940 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS32940 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS32940 PF00563 EAL domain AMIR_RS32965 PF04461 Protein of unknown function (DUF520) AMIR_RS32970 PF00483 Nucleotidyl transferase AMIR_RS32975 PF01435 Peptidase family M48 AMIR_RS32980 PF00037 4Fe-4S binding domain AMIR_RS32985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIR_RS32990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIR_RS33005 PF01037 Lrp/AsnC ligand binding domain AMIR_RS33010 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS33015 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMIR_RS33015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMIR_RS33015 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMIR_RS33020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33030 PF00892 EamA-like transporter family AMIR_RS33035 PF00348 Polyprenyl synthetase AMIR_RS33040 PF00361 Proton-conducting membrane transporter AMIR_RS33045 PF00361 Proton-conducting membrane transporter AMIR_RS33050 PF00361 Proton-conducting membrane transporter AMIR_RS33050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMIR_RS33055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMIR_RS33060 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMIR_RS33065 PF12838 4Fe-4S dicluster domain AMIR_RS33070 PF00146 NADH dehydrogenase AMIR_RS33075 PF00384 Molybdopterin oxidoreductase AMIR_RS33075 PF01568 Molydopterin dinucleotide binding domain AMIR_RS33075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMIR_RS33080 PF10531 SLBB domain AMIR_RS33080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIR_RS33080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIR_RS33090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIR_RS33095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIR_RS33100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIR_RS33105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMIR_RS33110 PF01494 FAD binding domain AMIR_RS33115 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS33120 PF00459 Inositol monophosphatase family AMIR_RS33130 PF00970 Oxidoreductase FAD-binding domain AMIR_RS33130 PF00175 Oxidoreductase NAD-binding domain AMIR_RS33130 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS33135 PF01883 Iron-sulfur cluster assembly protein AMIR_RS33140 PF05138 Phenylacetic acid catabolic protein AMIR_RS33145 PF06243 Phenylacetic acid degradation B AMIR_RS33150 PF05138 Phenylacetic acid catabolic protein AMIR_RS33160 PF00425 chorismate binding enzyme AMIR_RS33165 PF03747 ADP-ribosylglycohydrolase AMIR_RS33180 PF01040 UbiA prenyltransferase family AMIR_RS33190 PF00501 AMP-binding enzyme AMIR_RS33190 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33195 PF00378 Enoyl-CoA hydratase/isomerase AMIR_RS33200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS33205 PF01433 Peptidase family M1 domain AMIR_RS33205 PF11838 ERAP1-like C-terminal domain AMIR_RS33250 PF01578 Cytochrome C assembly protein AMIR_RS33255 PF05140 ResB-like family AMIR_RS33260 PF02683 Cytochrome C biogenesis protein transmembrane region AMIR_RS33270 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS33270 PF00107 Zinc-binding dehydrogenase AMIR_RS33280 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS33285 PF00202 Aminotransferase class-III AMIR_RS33325 PF00490 Delta-aminolevulinic acid dehydratase AMIR_RS33330 PF14824 Sirohaem biosynthesis protein central AMIR_RS33330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS33330 PF10414 Sirohaem synthase dimerisation region AMIR_RS33335 PF03900 Porphobilinogen deaminase, C-terminal domain AMIR_RS33335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMIR_RS33340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMIR_RS33340 PF01488 Shikimate / quinate 5-dehydrogenase AMIR_RS33340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMIR_RS33345 PF06971 Putative DNA-binding protein N-terminus AMIR_RS33345 PF02629 CoA binding domain AMIR_RS33350 PF02469 Fasciclin domain AMIR_RS33360 PF05768 Glutaredoxin-like domain (DUF836) AMIR_RS33365 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33365 PF00501 AMP-binding enzyme AMIR_RS33370 PF04542 Sigma-70 region 2 AMIR_RS33370 PF08281 Sigma-70, region 4 AMIR_RS33385 PF01553 Acyltransferase AMIR_RS33395 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS33400 PF12728 Helix-turn-helix domain AMIR_RS33405 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMIR_RS33405 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS33420 PF01261 Xylose isomerase-like TIM barrel AMIR_RS33430 PF02541 Ppx/GppA phosphatase family AMIR_RS33435 PF00072 Response regulator receiver domain AMIR_RS33435 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS33440 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS33440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS33445 PF00248 Aldo/keto reductase family AMIR_RS33450 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS33455 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS33460 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33460 PF00501 AMP-binding enzyme AMIR_RS33470 PF10722 Putative bacterial sensory transduction regulator AMIR_RS33475 PF00534 Glycosyl transferases group 1 AMIR_RS33475 PF13439 Glycosyltransferase Family 4 AMIR_RS33480 PF17964 Bacterial Ig domain AMIR_RS33480 PF03734 L,D-transpeptidase catalytic domain AMIR_RS33485 PF00106 short chain dehydrogenase AMIR_RS33495 PF01565 FAD binding domain AMIR_RS33495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMIR_RS33515 PF00551 Formyl transferase AMIR_RS33525 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS33525 PF13977 BetI-type transcriptional repressor, C-terminal AMIR_RS33535 PF13411 MerR HTH family regulatory protein AMIR_RS33535 PF07739 TipAS antibiotic-recognition domain AMIR_RS33540 PF01965 DJ-1/PfpI family AMIR_RS33550 PF10724 Protein of unknown function (DUF2516) AMIR_RS33560 PF01381 Helix-turn-helix AMIR_RS33570 PF04286 Protein of unknown function (DUF445) AMIR_RS33575 PF00155 Aminotransferase class I and II AMIR_RS33600 PF00005 ABC transporter AMIR_RS33630 PF00155 Aminotransferase class I and II AMIR_RS33630 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS33685 PF00403 Heavy-metal-associated domain AMIR_RS33695 PF00313 'Cold-shock' DNA-binding domain AMIR_RS33700 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS33715 PF17864 RuvB AAA lid domain AMIR_RS33715 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMIR_RS33715 PF05491 RuvB C-terminal winged helix domain AMIR_RS33735 PF00107 Zinc-binding dehydrogenase AMIR_RS33735 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS33755 PF01207 Dihydrouridine synthase (Dus) AMIR_RS33765 PF00072 Response regulator receiver domain AMIR_RS33765 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS33780 PF01895 PhoU domain AMIR_RS33795 PF00005 ABC transporter AMIR_RS33800 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS33805 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS33810 PF12849 PBP superfamily domain AMIR_RS33815 PF00583 Acetyltransferase (GNAT) family AMIR_RS33820 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS33845 PF00581 Rhodanese-like domain AMIR_RS33850 PF07210 Protein of unknown function (DUF1416) AMIR_RS33855 PF08768 Domain of unknown function (DUF1794) AMIR_RS33860 PF02682 Carboxyltransferase domain, subdomain C and D AMIR_RS33875 PF01475 Ferric uptake regulator family AMIR_RS33880 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS33895 PF07690 Major Facilitator Superfamily AMIR_RS33920 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS33920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS33920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33925 PF04962 KduI/IolB family AMIR_RS33935 PF00005 ABC transporter AMIR_RS33940 PF02653 Branched-chain amino acid transport system / permease component AMIR_RS33950 PF01261 Xylose isomerase-like TIM barrel AMIR_RS33955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS33955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS33960 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS33965 PF00472 RF-1 domain AMIR_RS33965 PF03462 PCRF domain AMIR_RS33980 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS33980 PF02769 AIR synthase related protein, C-terminal domain AMIR_RS33985 PF00156 Phosphoribosyl transferase domain AMIR_RS34000 PF06259 Alpha/beta hydrolase AMIR_RS34040 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS34040 PF00107 Zinc-binding dehydrogenase AMIR_RS34045 PF00563 EAL domain AMIR_RS34045 PF03707 Bacterial signalling protein N terminal repeat AMIR_RS34045 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS34070 PF01183 Glycosyl hydrolases family 25 AMIR_RS34075 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS34075 PF02769 AIR synthase related protein, C-terminal domain AMIR_RS34075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMIR_RS34085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMIR_RS34110 PF01259 SAICAR synthetase AMIR_RS34115 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS34120 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS34125 PF00005 ABC transporter AMIR_RS34135 PF00206 Lyase AMIR_RS34135 PF10397 Adenylosuccinate lyase C-terminus AMIR_RS34145 PF04542 Sigma-70 region 2 AMIR_RS34145 PF08281 Sigma-70, region 4 AMIR_RS34160 PF08281 Sigma-70, region 4 AMIR_RS34160 PF04542 Sigma-70 region 2 AMIR_RS34165 PF01212 Beta-eliminating lyase AMIR_RS34170 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS34180 PF00155 Aminotransferase class I and II AMIR_RS34210 PF02844 Phosphoribosylglycinamide synthetase, N domain AMIR_RS34210 PF02843 Phosphoribosylglycinamide synthetase, C domain AMIR_RS34210 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMIR_RS34225 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS34230 PF00296 Luciferase-like monooxygenase AMIR_RS34235 PF00709 Adenylosuccinate synthetase AMIR_RS34270 PF01116 Fructose-bisphosphate aldolase class-II AMIR_RS34280 PF00248 Aldo/keto reductase family AMIR_RS34295 PF08281 Sigma-70, region 4 AMIR_RS34295 PF04542 Sigma-70 region 2 AMIR_RS34305 PF01979 Amidohydrolase family AMIR_RS34315 PF09335 SNARE associated Golgi protein AMIR_RS34320 PF01565 FAD binding domain AMIR_RS34320 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS34325 PF09335 SNARE associated Golgi protein AMIR_RS34335 PF00294 pfkB family carbohydrate kinase AMIR_RS34340 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS34365 PF00156 Phosphoribosyl transferase domain AMIR_RS34390 PF00106 short chain dehydrogenase AMIR_RS34400 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS34400 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS34400 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS34400 PF17871 AAA lid domain AMIR_RS34400 PF02861 Clp amino terminal domain, pathogenicity island component AMIR_RS34410 PF00970 Oxidoreductase FAD-binding domain AMIR_RS34410 PF00175 Oxidoreductase NAD-binding domain AMIR_RS34410 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS34415 PF13411 MerR HTH family regulatory protein AMIR_RS34420 PF00684 DnaJ central domain AMIR_RS34420 PF01556 DnaJ C terminal domain AMIR_RS34420 PF00226 DnaJ domain AMIR_RS34425 PF01025 GrpE AMIR_RS34430 PF00012 Hsp70 protein AMIR_RS34445 PF00893 Small Multidrug Resistance protein AMIR_RS34450 PF02754 Cysteine-rich domain AMIR_RS34450 PF13183 4Fe-4S dicluster domain AMIR_RS34450 PF02665 Nitrate reductase gamma subunit AMIR_RS34455 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AMIR_RS34480 PF00692 dUTPase AMIR_RS34500 PF00072 Response regulator receiver domain AMIR_RS34500 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS34505 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMIR_RS34505 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS34505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS34520 PF00166 Chaperonin 10 Kd subunit AMIR_RS34525 PF00578 AhpC/TSA family AMIR_RS34525 PF02683 Cytochrome C biogenesis protein transmembrane region AMIR_RS34525 PF17991 Thioredoxin like C-terminal domain AMIR_RS34545 PF02803 Thiolase, C-terminal domain AMIR_RS34545 PF00108 Thiolase, N-terminal domain AMIR_RS34570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS34570 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS34570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS34580 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS34580 PF08362 YcdC-like protein, C-terminal region AMIR_RS34585 PF13411 MerR HTH family regulatory protein AMIR_RS34590 PF02817 e3 binding domain AMIR_RS34590 PF00364 Biotin-requiring enzyme AMIR_RS34590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS34595 PF02779 Transketolase, pyrimidine binding domain AMIR_RS34595 PF02780 Transketolase, C-terminal domain AMIR_RS34600 PF00676 Dehydrogenase E1 component AMIR_RS34605 PF01546 Peptidase family M20/M25/M40 AMIR_RS34605 PF07687 Peptidase dimerisation domain AMIR_RS34615 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS34620 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS34625 PF00005 ABC transporter AMIR_RS34655 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AMIR_RS34655 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AMIR_RS34680 PF00474 Sodium:solute symporter family AMIR_RS34685 PF00480 ROK family AMIR_RS34710 PF01025 GrpE AMIR_RS34715 PF00350 Dynamin family AMIR_RS34725 PF07730 Histidine kinase AMIR_RS34730 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34730 PF00072 Response regulator receiver domain AMIR_RS34750 PF00011 Hsp20/alpha crystallin family AMIR_RS34755 PF00011 Hsp20/alpha crystallin family AMIR_RS34760 PF07730 Histidine kinase AMIR_RS34765 PF02390 Putative methyltransferase AMIR_RS34775 PF00082 Subtilase family AMIR_RS34785 PF00005 ABC transporter AMIR_RS34800 PF01979 Amidohydrolase family AMIR_RS34805 PF00106 short chain dehydrogenase AMIR_RS34820 PF07690 Major Facilitator Superfamily AMIR_RS34825 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS34835 PF01658 Myo-inositol-1-phosphate synthase AMIR_RS34845 PF17249 Family of unknown function (DUF5318) AMIR_RS34850 PF00912 Transglycosylase AMIR_RS34850 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS34865 PF01261 Xylose isomerase-like TIM barrel AMIR_RS34875 PF01250 Ribosomal protein S6 AMIR_RS34880 PF00436 Single-strand binding protein family AMIR_RS34885 PF01084 Ribosomal protein S18 AMIR_RS34890 PF01281 Ribosomal protein L9, N-terminal domain AMIR_RS34890 PF03948 Ribosomal protein L9, C-terminal domain AMIR_RS34895 PF00772 DnaB-like helicase N terminal domain AMIR_RS34895 PF03796 DnaB-like helicase C terminal domain AMIR_RS34925 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS34945 PF01594 AI-2E family transporter AMIR_RS34950 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS34950 PF00072 Response regulator receiver domain AMIR_RS34960 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34960 PF00072 Response regulator receiver domain AMIR_RS34990 PF13460 NAD(P)H-binding AMIR_RS34990 PF11066 Protein of unknown function (DUF2867) AMIR_RS34995 PF00107 Zinc-binding dehydrogenase AMIR_RS34995 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS35000 PF00155 Aminotransferase class I and II AMIR_RS35005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS35005 PF03466 LysR substrate binding domain AMIR_RS35025 PF05524 PEP-utilising enzyme, N-terminal AMIR_RS35025 PF02896 PEP-utilising enzyme, TIM barrel domain AMIR_RS35025 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS35030 PF00294 pfkB family carbohydrate kinase AMIR_RS35040 PF03176 MMPL family AMIR_RS35045 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35045 PF13305 Tetracyclin repressor-like, C-terminal domain AMIR_RS35050 PF09334 tRNA synthetases class I (M) AMIR_RS35050 PF13603 Leucyl-tRNA synthetase, Domain 2 AMIR_RS35050 PF08264 Anticodon-binding domain of tRNA AMIR_RS35060 PF02622 Uncharacterized ACR, COG1678 AMIR_RS35065 PF07690 Major Facilitator Superfamily AMIR_RS35070 PF00072 Response regulator receiver domain AMIR_RS35070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35075 PF13735 tRNA nucleotidyltransferase domain 2 putative AMIR_RS35075 PF12627 Probable RNA and SrmB- binding site of polymerase A AMIR_RS35075 PF01743 Poly A polymerase head domain AMIR_RS35080 PF00293 NUDIX domain AMIR_RS35090 PF03023 Lipid II flippase MurJ AMIR_RS35095 PF03793 PASTA domain AMIR_RS35095 PF00069 Protein kinase domain AMIR_RS35100 PF08281 Sigma-70, region 4 AMIR_RS35100 PF04542 Sigma-70 region 2 AMIR_RS35110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS35115 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS35115 PF00085 Thioredoxin AMIR_RS35120 PF01471 Putative peptidoglycan binding domain AMIR_RS35120 PF01520 N-acetylmuramoyl-L-alanine amidase AMIR_RS35130 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS35130 PF00155 Aminotransferase class I and II AMIR_RS35135 PF01820 D-ala D-ala ligase N-terminus AMIR_RS35135 PF07478 D-ala D-ala ligase C-terminus AMIR_RS35140 PF17762 HTH domain found in ParB protein AMIR_RS35140 PF02195 ParB-like nuclease domain AMIR_RS35145 PF13614 AAA domain AMIR_RS35150 PF02527 rRNA small subunit methyltransferase G AMIR_RS35155 PF00293 NUDIX domain AMIR_RS35165 PF02096 60Kd inner membrane protein AMIR_RS35170 PF01809 Putative membrane protein insertion efficiency factor AMIR_RS35175 PF00825 Ribonuclease P AMIR_RS35180 PF00468 Ribosomal protein L34 AMIR_RS35205 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS35275 PF06271 RDD family AMIR_RS35280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS35280 PF03466 LysR substrate binding domain AMIR_RS35310 PF00931 NB-ARC domain AMIR_RS35310 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS35310 PF03704 Bacterial transcriptional activator domain AMIR_RS35385 PF00082 Subtilase family AMIR_RS35395 PF01569 PAP2 superfamily AMIR_RS35525 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS35525 PF00498 FHA domain AMIR_RS35525 PF00563 EAL domain AMIR_RS35530 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS35535 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS35545 PF13188 PAS domain AMIR_RS35545 PF08448 PAS fold AMIR_RS35545 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS35545 PF00072 Response regulator receiver domain AMIR_RS35545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS35565 PF00067 Cytochrome P450 AMIR_RS35570 PF07690 Major Facilitator Superfamily AMIR_RS35590 PF00563 EAL domain AMIR_RS35590 PF00990 Diguanylate cyclase, GGDEF domain AMIR_RS35590 PF08447 PAS fold AMIR_RS35590 PF08448 PAS fold AMIR_RS35625 PF00891 O-methyltransferase domain AMIR_RS35635 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS35635 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS35635 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS35635 PF08659 KR domain AMIR_RS35635 PF00550 Phosphopantetheine attachment site AMIR_RS35635 PF14765 Polyketide synthase dehydratase AMIR_RS35635 PF00698 Acyl transferase domain AMIR_RS35655 PF00067 Cytochrome P450 AMIR_RS35670 PF00072 Response regulator receiver domain AMIR_RS35670 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35675 PF05593 RHS Repeat AMIR_RS35675 PF03527 RHS protein AMIR_RS35690 PF00975 Thioesterase domain AMIR_RS35695 PF00975 Thioesterase domain AMIR_RS35700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS35700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS35725 PF03704 Bacterial transcriptional activator domain AMIR_RS35725 PF00931 NB-ARC domain AMIR_RS35725 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS35780 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35785 PF05257 CHAP domain AMIR_RS35785 PF01476 LysM domain AMIR_RS35850 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35865 PF00535 Glycosyl transferase family 2 AMIR_RS35870 PF00005 ABC transporter AMIR_RS35870 PF00664 ABC transporter transmembrane region AMIR_RS35875 PF00720 Subtilisin inhibitor-like AMIR_RS35895 PF13302 Acetyltransferase (GNAT) domain AMIR_RS35900 PF00975 Thioesterase domain AMIR_RS35900 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS35900 PF00668 Condensation domain AMIR_RS35900 PF00550 Phosphopantetheine attachment site AMIR_RS35900 PF00501 AMP-binding enzyme AMIR_RS35970 PF00106 short chain dehydrogenase AMIR_RS35980 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS35980 PF00931 NB-ARC domain AMIR_RS35980 PF03704 Bacterial transcriptional activator domain AMIR_RS36000 PF13569 Domain of unknown function (DUF4132) AMIR_RS36020 PF06722 Protein of unknown function (DUF1205) AMIR_RS36030 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS36040 PF03527 RHS protein AMIR_RS36040 PF05593 RHS Repeat AMIR_RS36075 PF16859 Tetracyclin repressor-like, C-terminal domain AMIR_RS36075 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS36080 PF08241 Methyltransferase domain AMIR_RS36095 PF13439 Glycosyltransferase Family 4 AMIR_RS36100 PF00400 WD domain, G-beta repeat AMIR_RS36100 PF00069 Protein kinase domain AMIR_RS36120 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS36120 PF00931 NB-ARC domain AMIR_RS36120 PF03704 Bacterial transcriptional activator domain AMIR_RS36140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS36140 PF08269 Cache domain AMIR_RS36145 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS36145 PF08361 MAATS-type transcriptional repressor, C-terminal region AMIR_RS36150 PF13229 Right handed beta helix region AMIR_RS36155 PF08659 KR domain AMIR_RS36155 PF00550 Phosphopantetheine attachment site AMIR_RS36155 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS36155 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS36155 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS36155 PF00698 Acyl transferase domain AMIR_RS36180 PF00069 Protein kinase domain AMIR_RS36180 PF00400 WD domain, G-beta repeat AMIR_RS36190 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS36190 PF00550 Phosphopantetheine attachment site AMIR_RS36190 PF00668 Condensation domain AMIR_RS36190 PF00698 Acyl transferase domain AMIR_RS36190 PF16197 Ketoacyl-synthetase C-terminal extension AMIR_RS36190 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS36200 PF00664 ABC transporter transmembrane region AMIR_RS36200 PF00005 ABC transporter AMIR_RS36215 PF00534 Glycosyl transferases group 1 AMIR_RS36215 PF13439 Glycosyltransferase Family 4 AMIR_RS36340 PF01183 Glycosyl hydrolases family 25 AMIR_RS36375 PF00188 Cysteine-rich secretory protein family AMIR_RS36390 PF07681 DoxX AMIR_RS36405 PF00720 Subtilisin inhibitor-like AMIR_RS36510 PF03816 Cell envelope-related transcriptional attenuator domain