AMIR_RS00005 PF00308 Bacterial dnaA protein AMIR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMIR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMIR_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMIR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMIR_RS00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIR_RS00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS00020 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS00025 PF05258 AMIR_RS00025 AMIR_RS00030 PF00204 DNA gyrase B AMIR_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus AMIR_RS00030 PF01751 Toprim domain AMIR_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIR_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIR_RS00040 PF12089 AMIR_RS00040 AMIR_RS00055 PF07681 AMIR_RS00055 AMIR_RS00060 PF09449 Domain of unknown function (DUF2020) AMIR_RS00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS00075 PF01694 Rhomboid family AMIR_RS00080 PF10756 AMIR_RS00080 AMIR_RS00085 PF06781 AMIR_RS00085 AMIR_RS00090 PF04203 Sortase family AMIR_RS00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS00100 PF00117 Glutamine amidotransferase class-I AMIR_RS00105 PF00069 Protein kinase domain AMIR_RS00105 PF03793 PASTA domain AMIR_RS00110 PF00069 Protein kinase domain AMIR_RS00115 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS00120 PF01098 AMIR_RS00120 AMIR_RS00125 PF13672 Protein phosphatase 2C AMIR_RS00130 PF00498 FHA domain AMIR_RS00135 PF00498 FHA domain AMIR_RS00135 PF12401 Protein of unknown function (DUF2662) AMIR_RS00150 PF13460 NADH(P)-binding AMIR_RS00155 PF01565 FAD binding domain AMIR_RS00155 PF04030 D-arabinono-1,4-lactone oxidase AMIR_RS00160 PF01168 Alanine racemase, N-terminal domain AMIR_RS00165 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS00170 PF00232 Glycosyl hydrolase family 1 AMIR_RS00175 PF07690 Major Facilitator Superfamily AMIR_RS00180 PF00106 short chain dehydrogenase AMIR_RS00190 PF13560 Helix-turn-helix domain AMIR_RS00195 PF01636 Phosphotransferase enzyme family AMIR_RS00205 PF05425 AMIR_RS00205 AMIR_RS00210 PF04234 CopC domain AMIR_RS00215 PF07987 Domain of unkown function (DUF1775) AMIR_RS00225 PF02028 BCCT family transporter AMIR_RS00235 PF13482 RNase_H superfamily AMIR_RS00240 PF00106 short chain dehydrogenase AMIR_RS00245 PF01019 Gamma-glutamyltranspeptidase AMIR_RS00260 PF16822 AMIR_RS00260 AMIR_RS00270 PF00535 Glycosyl transferase family 2 AMIR_RS00275 PF00535 Glycosyl transferase family 2 AMIR_RS00275 PF08241 Methyltransferase domain AMIR_RS00285 PF00534 Glycosyl transferases group 1 AMIR_RS00300 PF02566 OsmC-like protein AMIR_RS00315 PF04542 Sigma-70 region 2 AMIR_RS00315 PF13490 Putative zinc-finger AMIR_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00325 PF06580 AMIR_RS00325 AMIR_RS00330 PF01343 Peptidase family S49 AMIR_RS00335 PF00072 Response regulator receiver domain AMIR_RS00335 PF04397 LytTr DNA-binding domain AMIR_RS00345 PF00474 Sodium:solute symporter family AMIR_RS00350 PF04341 AMIR_RS00350 AMIR_RS00355 PF00474 Sodium:solute symporter family AMIR_RS00360 PF12728 Helix-turn-helix domain AMIR_RS00370 PF00581 Rhodanese-like domain AMIR_RS00375 PF14219 AMIR_RS00375 AMIR_RS00380 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS00385 PF00067 Cytochrome P450 AMIR_RS00390 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS00395 PF02810 SEC-C motif AMIR_RS00400 PF06108 Protein of unknown function (DUF952) AMIR_RS00405 PF13816 Haem-containing dehydratase AMIR_RS00410 PF00210 Ferritin-like domain AMIR_RS00415 PF02274 Amidinotransferase AMIR_RS00420 PF05719 Golgi phosphoprotein 3 (GPP34) AMIR_RS00425 PF02517 CAAX protease self-immunity AMIR_RS00430 PF10615 Protein of unknown function (DUF2470) AMIR_RS00440 PF04209 homogentisate 1,2-dioxygenase AMIR_RS00450 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIR_RS00455 PF09339 IclR helix-turn-helix domain AMIR_RS00460 PF01654 AMIR_RS00460 AMIR_RS00465 PF02322 AMIR_RS00465 AMIR_RS00470 PF13676 TIR domain AMIR_RS00475 PF00005 ABC transporter AMIR_RS00475 PF00664 ABC transporter transmembrane region AMIR_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS00480 PF07730 Histidine kinase AMIR_RS00480 PF13185 GAF domain AMIR_RS00485 PF00072 Response regulator receiver domain AMIR_RS00485 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS00490 PF00583 Acetyltransferase (GNAT) family AMIR_RS00495 PF01661 Macro domain AMIR_RS00500 PF00800 Prephenate dehydratase AMIR_RS00500 PF01842 ACT domain AMIR_RS00505 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS00515 PF14430 AMIR_RS00515 AMIR_RS00520 PF14428 AMIR_RS00520 AMIR_RS00535 PF13560 Helix-turn-helix domain AMIR_RS00540 PF04149 AMIR_RS00540 AMIR_RS00545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS00550 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS00550 PF01055 Glycosyl hydrolases family 31 AMIR_RS00550 PF03422 Carbohydrate binding module (family 6) AMIR_RS00550 PF17137 AMIR_RS00550 AMIR_RS00560 PF00082 Subtilase family AMIR_RS00570 PF06262 Possibl zinc metallo-peptidase AMIR_RS00575 PF13845 AMIR_RS00575 AMIR_RS00585 PF03738 Glutathionylspermidine synthase preATP-grasp AMIR_RS00590 PF03994 AMIR_RS00590 AMIR_RS00600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS00600 PF02403 Seryl-tRNA synthetase N-terminal domain AMIR_RS00605 PF01266 FAD dependent oxidoreductase AMIR_RS00610 PF00296 Luciferase-like monooxygenase AMIR_RS00615 PF08282 haloacid dehalogenase-like hydrolase AMIR_RS00625 PF00535 Glycosyl transferase family 2 AMIR_RS00630 PF04138 AMIR_RS00630 AMIR_RS00635 PF01757 AMIR_RS00635 AMIR_RS00640 PF00534 Glycosyl transferases group 1 AMIR_RS00640 PF13439 Glycosyltransferase Family 4 AMIR_RS00645 PF00535 Glycosyl transferase family 2 AMIR_RS00650 PF03275 UDP-galactopyranose mutase AMIR_RS00650 PF13450 NAD(P)-binding Rossmann-like domain AMIR_RS00670 PF00535 Glycosyl transferase family 2 AMIR_RS00675 PF00005 ABC transporter AMIR_RS00680 PF01061 AMIR_RS00680 AMIR_RS00685 PF10759 AMIR_RS00685 AMIR_RS00690 PF00266 Aminotransferase class-V AMIR_RS00695 PF13578 Methyltransferase domain AMIR_RS00700 PF15521 AMIR_RS00700 AMIR_RS00705 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS00705 PF13602 Zinc-binding dehydrogenase AMIR_RS00710 PF13302 Acetyltransferase (GNAT) domain AMIR_RS00715 PF02225 PA domain AMIR_RS00715 PF04389 Peptidase family M28 AMIR_RS00720 PF04228 AMIR_RS00720 AMIR_RS00725 PF00149 Calcineurin-like phosphoesterase AMIR_RS00725 PF02872 5'-nucleotidase, C-terminal domain AMIR_RS00730 PF12802 MarR family AMIR_RS00740 PF01925 AMIR_RS00740 AMIR_RS00745 PF00155 Aminotransferase class I and II AMIR_RS00750 PF01738 Dienelactone hydrolase family AMIR_RS00765 PF00823 PPE family AMIR_RS00770 PF14011 EspG family AMIR_RS00775 PF00501 AMP-binding enzyme AMIR_RS00775 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS00775 PF16177 AMIR_RS00775 AMIR_RS00800 PF00144 Beta-lactamase AMIR_RS00810 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS00830 PF00145 C-5 cytosine-specific DNA methylase AMIR_RS00835 PF08341 Fibronectin-binding protein signal sequence AMIR_RS00840 PF06475 Putative glycolipid-binding AMIR_RS00845 PF00108 Thiolase, N-terminal domain AMIR_RS00845 PF02803 Thiolase, C-terminal domain AMIR_RS00855 PF00041 Fibronectin type III domain AMIR_RS00860 PF02153 Prephenate dehydrogenase AMIR_RS00865 PF01546 Peptidase family M20/M25/M40 AMIR_RS00865 PF07687 Peptidase dimerisation domain AMIR_RS00875 PF14437 AMIR_RS00875 AMIR_RS00885 PF00589 Phage integrase family AMIR_RS00885 PF14659 Phage integrase, N-terminal SAM-like domain AMIR_RS00890 PF12728 Helix-turn-helix domain AMIR_RS00895 PF12307 AMIR_RS00895 AMIR_RS00925 PF13560 Helix-turn-helix domain AMIR_RS00930 PF13359 AMIR_RS00930 AMIR_RS00930 PF13613 AMIR_RS00930 AMIR_RS00935 PF01063 Aminotransferase class IV AMIR_RS00940 PF03781 Sulfatase-modifying factor enzyme 1 AMIR_RS00940 PF13560 Helix-turn-helix domain AMIR_RS00955 PF00656 Caspase domain AMIR_RS00960 PF13676 TIR domain AMIR_RS00965 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMIR_RS00975 PF14408 AMIR_RS00975 AMIR_RS00980 PF13560 Helix-turn-helix domain AMIR_RS00985 PF00932 Lamin Tail Domain AMIR_RS00985 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS00990 PF01042 Endoribonuclease L-PSP AMIR_RS00995 PF13305 WHG domain AMIR_RS01005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01005 PF00672 HAMP domain AMIR_RS01005 PF17201 AMIR_RS01005 AMIR_RS01010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01010 PF00672 HAMP domain AMIR_RS01010 PF12729 AMIR_RS01010 AMIR_RS01015 PF01497 Periplasmic binding protein AMIR_RS01020 PF12169 DNA polymerase III subunits gamma and tau domain III AMIR_RS01020 PF13177 DNA polymerase III, delta subunit AMIR_RS01025 PF02575 YbaB/EbfC DNA-binding family AMIR_RS01030 PF02132 RecR protein AMIR_RS01030 PF13662 Toprim domain AMIR_RS01055 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01055 PF00931 NB-ARC domain AMIR_RS01055 PF03704 Bacterial transcriptional activator domain AMIR_RS01055 PF13424 Tetratricopeptide repeat AMIR_RS01060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01070 PF12911 AMIR_RS01070 AMIR_RS01075 PF00005 ABC transporter AMIR_RS01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS01080 PF00005 ABC transporter AMIR_RS01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS01085 PF02384 N-6 DNA Methylase AMIR_RS01090 PF09335 AMIR_RS01090 AMIR_RS01095 PF00682 HMGL-like AMIR_RS01095 PF08502 LeuA allosteric (dimerisation) domain AMIR_RS01105 PF00881 Nitroreductase family AMIR_RS01115 PF00696 Amino acid kinase family AMIR_RS01115 PF01842 ACT domain AMIR_RS01115 PF13840 ACT domain AMIR_RS01120 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS01120 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIR_RS01125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS01125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS01130 PF00313 'Cold-shock' DNA-binding domain AMIR_RS01135 PF07690 Major Facilitator Superfamily AMIR_RS01140 PF00199 Catalase AMIR_RS01140 PF06628 Catalase-related immune-responsive AMIR_RS01145 PF02566 OsmC-like protein AMIR_RS01150 PF00210 Ferritin-like domain AMIR_RS01155 PF03358 NADPH-dependent FMN reductase AMIR_RS01160 PF07859 alpha/beta hydrolase fold AMIR_RS01165 PF00326 Prolyl oligopeptidase family AMIR_RS01170 PF08241 Methyltransferase domain AMIR_RS01200 PF12850 Calcineurin-like phosphoesterase superfamily domain AMIR_RS01205 PF09424 Yqey-like protein AMIR_RS01210 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS01210 PF00912 Transglycosylase AMIR_RS01210 PF03793 PASTA domain AMIR_RS01215 PF02467 AMIR_RS01215 AMIR_RS01220 PF02374 Anion-transporting ATPase AMIR_RS01225 PF02374 Anion-transporting ATPase AMIR_RS01235 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AMIR_RS01255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS01270 PF00753 Metallo-beta-lactamase superfamily AMIR_RS01285 PF00712 DNA polymerase III beta subunit, N-terminal domain AMIR_RS01285 PF02767 DNA polymerase III beta subunit, central domain AMIR_RS01285 PF02768 DNA polymerase III beta subunit, C-terminal domain AMIR_RS01290 PF07690 Major Facilitator Superfamily AMIR_RS01295 PF00027 Cyclic nucleotide-binding domain AMIR_RS01295 PF13545 Crp-like helix-turn-helix domain AMIR_RS01305 PF00633 Helix-hairpin-helix motif AMIR_RS01305 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS01310 PF00578 AhpC/TSA family AMIR_RS01315 PF00293 NUDIX domain AMIR_RS01320 PF02674 AMIR_RS01320 AMIR_RS01320 PF13365 Trypsin-like peptidase domain AMIR_RS01325 PF00561 alpha/beta hydrolase fold AMIR_RS01330 PF07332 AMIR_RS01330 AMIR_RS01335 PF06965 Na+/H+ antiporter 1 AMIR_RS01340 PF00501 AMP-binding enzyme AMIR_RS01340 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS01340 PF16177 AMIR_RS01340 AMIR_RS01345 PF13302 Acetyltransferase (GNAT) domain AMIR_RS01355 PF00266 Aminotransferase class-V AMIR_RS01360 PF03301 Tryptophan 2,3-dioxygenase AMIR_RS01365 PF01037 AsnC family AMIR_RS01365 PF13404 AsnC-type helix-turn-helix domain AMIR_RS01370 PF13580 SIS domain AMIR_RS01375 PF01380 SIS domain AMIR_RS01375 PF01418 Helix-turn-helix domain, rpiR family AMIR_RS01380 PF00144 Beta-lactamase AMIR_RS01390 PF07075 Protein of unknown function (DUF1343) AMIR_RS01400 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS01400 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS01405 PF12710 haloacid dehalogenase-like hydrolase AMIR_RS01415 PF00437 Type II/IV secretion system protein AMIR_RS01420 PF00482 Type II secretion system (T2SS), protein F AMIR_RS01425 PF00482 Type II secretion system (T2SS), protein F AMIR_RS01430 PF07811 AMIR_RS01430 AMIR_RS01435 PF13400 AMIR_RS01435 AMIR_RS01440 PF09250 Bifunctional DNA primase/polymerase, N-terminal AMIR_RS01445 PF00270 DEAD/DEAH box helicase AMIR_RS01445 PF00271 Helicase conserved C-terminal domain AMIR_RS01445 PF09369 AMIR_RS01445 AMIR_RS01450 PF03030 Inorganic H+ pyrophosphatase AMIR_RS01480 PF01131 DNA topoisomerase AMIR_RS01480 PF01751 Toprim domain AMIR_RS01480 PF13368 AMIR_RS01480 AMIR_RS01490 PF02223 Thymidylate kinase AMIR_RS01490 PF05977 Transmembrane secretion effector AMIR_RS01495 PF13177 DNA polymerase III, delta subunit AMIR_RS01510 PF01032 FecCD transport family AMIR_RS01515 PF01497 Periplasmic binding protein AMIR_RS01520 PF00005 ABC transporter AMIR_RS01525 PF00296 Luciferase-like monooxygenase AMIR_RS01530 PF05901 AMIR_RS01530 AMIR_RS01535 PF05901 AMIR_RS01535 AMIR_RS01545 PF14539 Domain of unknown function (DUF4442) AMIR_RS01550 PF01047 MarR family AMIR_RS01555 PF07690 Major Facilitator Superfamily AMIR_RS01560 PF00719 Inorganic pyrophosphatase AMIR_RS01570 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AMIR_RS01575 PF10103 Uncharacterised conserved protein (DUF2342) AMIR_RS01580 PF01171 PP-loop family AMIR_RS01580 PF09179 TilS substrate binding domain AMIR_RS01585 PF00156 Phosphoribosyl transferase domain AMIR_RS01590 PF00092 von Willebrand factor type A domain AMIR_RS01590 PF13531 Bacterial extracellular solute-binding protein AMIR_RS01595 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS01595 PF01434 Peptidase family M41 AMIR_RS01600 PF01227 GTP cyclohydrolase I AMIR_RS01605 PF00809 Pterin binding enzyme AMIR_RS01610 PF02152 Dihydroneopterin aldolase AMIR_RS01615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMIR_RS01620 PF11377 AMIR_RS01620 AMIR_RS01630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIR_RS01635 PF06718 AMIR_RS01635 AMIR_RS01640 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AMIR_RS01645 PF13367 AMIR_RS01645 AMIR_RS01650 PF10727 Rossmann-like domain AMIR_RS01650 PF10728 Domain of unknown function (DUF2520) AMIR_RS01655 PF02569 Pantoate-beta-alanine ligase AMIR_RS01660 PF02261 Aspartate decarboxylase AMIR_RS01665 PF03309 Type III pantothenate kinase AMIR_RS01670 PF08241 Methyltransferase domain AMIR_RS01675 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS01675 PF01336 OB-fold nucleic acid binding domain AMIR_RS01680 PF11774 Lsr2 AMIR_RS01685 PF01032 FecCD transport family AMIR_RS01690 PF01032 FecCD transport family AMIR_RS01695 PF00005 ABC transporter AMIR_RS01700 PF06276 Ferric iron reductase FhuF-like transporter AMIR_RS01700 PF11575 AMIR_RS01700 AMIR_RS01705 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS01705 PF02151 UvrB/uvrC motif AMIR_RS01705 PF02861 Clp amino terminal domain AMIR_RS01705 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS01705 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS01710 PF01470 Pyroglutamyl peptidase AMIR_RS01715 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS01720 PF02146 Sir2 family AMIR_RS01725 PF03992 Antibiotic biosynthesis monooxygenase AMIR_RS01730 PF01433 Peptidase family M1 AMIR_RS01735 PF12697 Alpha/beta hydrolase family AMIR_RS01745 PF00633 Helix-hairpin-helix motif AMIR_RS01745 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS01750 PF00484 Carbonic anhydrase AMIR_RS01760 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS01760 PF13377 Periplasmic binding protein-like domain AMIR_RS01765 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS01765 PF13377 Periplasmic binding protein-like domain AMIR_RS01770 PF13416 Bacterial extracellular solute-binding protein AMIR_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS01785 PF00005 ABC transporter AMIR_RS01785 PF08402 TOBE domain AMIR_RS01790 PF01297 Periplasmic solute binding protein family AMIR_RS01795 PF00005 ABC transporter AMIR_RS01800 PF00950 AMIR_RS01800 AMIR_RS01805 PF00990 GGDEF domain AMIR_RS01810 PF07690 Major Facilitator Superfamily AMIR_RS01820 PF03062 AMIR_RS01820 AMIR_RS01825 PF00588 SpoU rRNA Methylase family AMIR_RS01825 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS01830 PF01406 tRNA synthetases class I (C) catalytic domain AMIR_RS01830 PF09190 DALR domain AMIR_RS01835 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS01840 PF02542 YgbB family AMIR_RS01845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMIR_RS01850 PF02559 CarD-like/TRCF domain AMIR_RS01860 PF13481 AAA domain AMIR_RS01860 PF13541 Subunit ChlI of Mg-chelatase AMIR_RS01865 PF13560 Helix-turn-helix domain AMIR_RS01870 PF00106 short chain dehydrogenase AMIR_RS01875 PF00723 Glycosyl hydrolases family 15 AMIR_RS01875 PF02358 Trehalose-phosphatase AMIR_RS01880 PF00982 Glycosyltransferase family 20 AMIR_RS01885 PF06738 AMIR_RS01885 AMIR_RS01885 PF12821 AMIR_RS01885 AMIR_RS01895 PF12840 Helix-turn-helix domain AMIR_RS01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01900 PF00672 HAMP domain AMIR_RS01900 PF12729 AMIR_RS01900 AMIR_RS01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS01905 PF13185 GAF domain AMIR_RS01910 PF00092 von Willebrand factor type A domain AMIR_RS01915 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS01915 PF00672 HAMP domain AMIR_RS01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS01920 PF00072 Response regulator receiver domain AMIR_RS01920 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01925 PF00175 Oxidoreductase NAD-binding domain AMIR_RS01925 PF01794 AMIR_RS01925 AMIR_RS01930 PF04205 FMN-binding domain AMIR_RS01935 PF02424 ApbE family AMIR_RS01945 PF03747 ADP-ribosylglycohydrolase AMIR_RS01950 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS01950 PF00931 NB-ARC domain AMIR_RS01950 PF03704 Bacterial transcriptional activator domain AMIR_RS01955 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS01965 PF11361 AMIR_RS01965 AMIR_RS01970 PF00296 Luciferase-like monooxygenase AMIR_RS01975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS01975 PF03466 LysR substrate binding domain AMIR_RS01980 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMIR_RS01985 PF00082 Subtilase family AMIR_RS01990 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIR_RS01995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS01995 PF13378 Enolase C-terminal domain-like AMIR_RS02000 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS02005 PF00248 Aldo/keto reductase family AMIR_RS02010 PF04909 Amidohydrolase AMIR_RS02015 PF00144 Beta-lactamase AMIR_RS02020 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02020 PF07729 FCD domain AMIR_RS02025 PF01380 SIS domain AMIR_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02035 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02040 PF01547 Bacterial extracellular solute-binding protein AMIR_RS02045 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02045 PF07702 UTRA domain AMIR_RS02050 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS02055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIR_RS02060 PF02581 Thiamine monophosphate synthase/TENI AMIR_RS02065 PF01266 FAD dependent oxidoreductase AMIR_RS02070 PF02597 ThiS family AMIR_RS02075 PF05690 Thiazole biosynthesis protein ThiG AMIR_RS02080 PF01047 MarR family AMIR_RS02085 PF04072 Leucine carboxyl methyltransferase AMIR_RS02090 PF04149 AMIR_RS02090 AMIR_RS02095 PF13560 Helix-turn-helix domain AMIR_RS02100 PF16827 AMIR_RS02100 AMIR_RS02110 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS02115 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02120 PF12697 Alpha/beta hydrolase family AMIR_RS02125 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02130 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS02130 PF13602 Zinc-binding dehydrogenase AMIR_RS02135 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02140 PF08543 Phosphomethylpyrimidine kinase AMIR_RS02145 PF01964 ThiC family AMIR_RS02145 PF13667 ThiC-associated domain AMIR_RS02155 PF01327 Polypeptide deformylase AMIR_RS02160 PF11662 AMIR_RS02160 AMIR_RS02165 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS02170 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS02170 PF07729 FCD domain AMIR_RS02175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS02180 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS02180 PF02359 Cell division protein 48 (CDC48), N-terminal domain AMIR_RS02185 PF04542 Sigma-70 region 2 AMIR_RS02185 PF04545 Sigma-70, region 4 AMIR_RS02195 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS02195 PF08009 AMIR_RS02195 AMIR_RS02200 PF02666 AMIR_RS02200 AMIR_RS02205 PF01435 Peptidase family M48 AMIR_RS02210 PF00994 Probable molybdopterin binding domain AMIR_RS02210 PF03453 MoeA N-terminal region (domain I and II) AMIR_RS02210 PF03454 MoeA C-terminal region (domain IV) AMIR_RS02215 PF01987 Mitochondrial biogenesis AIM24 AMIR_RS02220 PF00313 'Cold-shock' DNA-binding domain AMIR_RS02225 PF00069 Protein kinase domain AMIR_RS02230 PF00118 TCP-1/cpn60 chaperonin family AMIR_RS02240 PF04542 Sigma-70 region 2 AMIR_RS02245 PF03932 CutC family AMIR_RS02250 PF13416 Bacterial extracellular solute-binding protein AMIR_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS02265 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIR_RS02265 PF02838 Glycosyl hydrolase family 20, domain 2 AMIR_RS02270 PF04024 AMIR_RS02270 AMIR_RS02275 PF02625 XdhC and CoxI family AMIR_RS02275 PF13478 XdhC Rossmann domain AMIR_RS02280 PF13378 Enolase C-terminal domain-like AMIR_RS02285 PF04851 Type III restriction enzyme, res subunit AMIR_RS02285 PF13625 AMIR_RS02285 AMIR_RS02285 PF16203 AMIR_RS02285 AMIR_RS02305 PF13379 NMT1-like family AMIR_RS02310 PF00672 HAMP domain AMIR_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS02310 PF08376 Nitrate and nitrite sensing AMIR_RS02315 PF03259 Roadblock/LC7 domain AMIR_RS02320 PF05331 AMIR_RS02320 AMIR_RS02325 PF03029 Conserved hypothetical ATP binding protein AMIR_RS02335 PF13625 AMIR_RS02335 AMIR_RS02345 PF00390 Malic enzyme, N-terminal domain AMIR_RS02345 PF03949 Malic enzyme, NAD binding domain AMIR_RS02350 PF01967 MoaC family AMIR_RS02355 PF00994 Probable molybdopterin binding domain AMIR_RS02360 PF02391 MoaE protein AMIR_RS02365 PF01476 LysM domain AMIR_RS02365 PF06737 Transglycosylase-like domain AMIR_RS02370 PF02597 ThiS family AMIR_RS02375 PF04055 Radical SAM superfamily AMIR_RS02375 PF06463 Molybdenum Cofactor Synthesis C AMIR_RS02375 PF13353 4Fe-4S single cluster domain AMIR_RS02380 PF01047 MarR family AMIR_RS02385 PF13242 HAD-hyrolase-like AMIR_RS02385 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS02390 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS02395 PF00149 Calcineurin-like phosphoesterase AMIR_RS02400 PF03733 AMIR_RS02400 AMIR_RS02405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS02415 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS02425 PF00313 'Cold-shock' DNA-binding domain AMIR_RS02430 PF10969 AMIR_RS02430 AMIR_RS02435 PF07690 Major Facilitator Superfamily AMIR_RS02440 PF05096 Glutamine cyclotransferase AMIR_RS02445 PF11228 AMIR_RS02445 AMIR_RS02455 PF10745 AMIR_RS02455 AMIR_RS02460 PF00860 Permease family AMIR_RS02465 PF01047 MarR family AMIR_RS02470 PF05977 Transmembrane secretion effector AMIR_RS02475 PF05977 Transmembrane secretion effector AMIR_RS02480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMIR_RS02480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMIR_RS02485 PF00005 ABC transporter AMIR_RS02495 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS02500 PF00588 SpoU rRNA Methylase family AMIR_RS02505 PF10801 AMIR_RS02505 AMIR_RS02510 PF00326 Prolyl oligopeptidase family AMIR_RS02515 PF05977 Transmembrane secretion effector AMIR_RS02520 PF02278 Polysaccharide lyase family 8, super-sandwich domain AMIR_RS02520 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AMIR_RS02525 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS02525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMIR_RS02530 PF01774 UreD urease accessory protein AMIR_RS02535 PF14016 AMIR_RS02535 AMIR_RS02540 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS02545 PF01730 UreF AMIR_RS02550 PF00449 Urease alpha-subunit, N-terminal domain AMIR_RS02550 PF01979 Amidohydrolase family AMIR_RS02555 PF00699 Urease beta subunit AMIR_RS02560 PF00547 Urease, gamma subunit AMIR_RS02565 PF00285 Citrate synthase AMIR_RS02570 PF00005 ABC transporter AMIR_RS02575 PF01061 AMIR_RS02575 AMIR_RS02580 PF07730 Histidine kinase AMIR_RS02585 PF00072 Response regulator receiver domain AMIR_RS02585 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02590 PF00266 Aminotransferase class-V AMIR_RS02595 PF11268 AMIR_RS02595 AMIR_RS02615 PF00005 ABC transporter AMIR_RS02615 PF00664 ABC transporter transmembrane region AMIR_RS02620 PF00005 ABC transporter AMIR_RS02620 PF00664 ABC transporter transmembrane region AMIR_RS02630 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02630 PF16859 AMIR_RS02630 AMIR_RS02635 PF13520 Amino acid permease AMIR_RS02640 PF01263 Aldose 1-epimerase AMIR_RS02645 PF07969 Amidohydrolase family AMIR_RS02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS02650 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS02655 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS02660 PF00294 pfkB family carbohydrate kinase AMIR_RS02665 PF00285 Citrate synthase AMIR_RS02670 PF00875 DNA photolyase AMIR_RS02670 PF03441 FAD binding domain of DNA photolyase AMIR_RS02675 PF00072 Response regulator receiver domain AMIR_RS02675 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02680 PF07730 Histidine kinase AMIR_RS02680 PF13796 AMIR_RS02680 AMIR_RS02685 PF12698 ABC-2 family transporter protein AMIR_RS02690 PF00005 ABC transporter AMIR_RS02690 PF13732 AMIR_RS02690 AMIR_RS02695 PF01381 Helix-turn-helix AMIR_RS02700 PF02575 YbaB/EbfC DNA-binding family AMIR_RS02705 PF10824 Protein of unknown function (DUF2580) AMIR_RS02715 PF07969 Amidohydrolase family AMIR_RS02720 PF00107 Zinc-binding dehydrogenase AMIR_RS02720 PF16884 AMIR_RS02720 AMIR_RS02725 PF08445 FR47-like protein AMIR_RS02735 PF01580 FtsK/SpoIIIE family AMIR_RS02755 PF14011 EspG family AMIR_RS02760 PF12146 Putative lysophospholipase AMIR_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS02765 PF03466 LysR substrate binding domain AMIR_RS02770 PF02567 Phenazine biosynthesis-like protein AMIR_RS02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS02775 PF03466 LysR substrate binding domain AMIR_RS02780 PF05368 NmrA-like family AMIR_RS02785 PF01638 HxlR-like helix-turn-helix AMIR_RS02790 PF06094 AIG2-like family AMIR_RS02795 PF14016 AMIR_RS02795 AMIR_RS02805 PF00350 Dynamin family AMIR_RS02815 PF00012 Hsp70 protein AMIR_RS02820 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS02825 PF09933 AMIR_RS02825 AMIR_RS02830 PF00400 WD domain, G-beta repeat AMIR_RS02830 PF13191 AAA ATPase domain AMIR_RS02835 PF06029 AlkA N-terminal domain AMIR_RS02835 PF12833 Helix-turn-helix domain AMIR_RS02840 PF04672 S-adenosyl methyltransferase AMIR_RS02845 PF13560 Helix-turn-helix domain AMIR_RS02850 PF04149 AMIR_RS02850 AMIR_RS02865 PF05738 Cna protein B-type domain AMIR_RS02865 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS02875 PF03527 AMIR_RS02875 AMIR_RS02875 PF05593 AMIR_RS02875 AMIR_RS02890 PF00293 NUDIX domain AMIR_RS02895 PF00931 NB-ARC domain AMIR_RS02895 PF03704 Bacterial transcriptional activator domain AMIR_RS02895 PF13424 Tetratricopeptide repeat AMIR_RS02930 PF13359 AMIR_RS02930 AMIR_RS02930 PF13613 AMIR_RS02930 AMIR_RS02935 PF13359 AMIR_RS02935 AMIR_RS02935 PF13613 AMIR_RS02935 AMIR_RS02945 PF14280 AMIR_RS02945 AMIR_RS02955 PF14072 AMIR_RS02955 AMIR_RS02960 PF01507 Phosphoadenosine phosphosulfate reductase family AMIR_RS02970 PF13182 AMIR_RS02970 AMIR_RS02975 PF00266 Aminotransferase class-V AMIR_RS02980 PF00271 Helicase conserved C-terminal domain AMIR_RS02980 PF04851 Type III restriction enzyme, res subunit AMIR_RS02985 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS02995 PF00589 Phage integrase family AMIR_RS03010 PF01804 Penicillin amidase AMIR_RS03015 PF00072 Response regulator receiver domain AMIR_RS03015 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS03020 PF00990 GGDEF domain AMIR_RS03025 PF00881 Nitroreductase family AMIR_RS03030 PF01084 Ribosomal protein S18 AMIR_RS03035 PF00253 Ribosomal protein S14p/S29e AMIR_RS03040 PF00471 Ribosomal protein L33 AMIR_RS03045 PF00830 Ribosomal L28 family AMIR_RS03050 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS03055 PF07110 EthD domain AMIR_RS03060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS03060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS03065 PF13527 Acetyltransferase (GNAT) domain AMIR_RS03065 PF13530 Sterol carrier protein domain AMIR_RS03070 PF00072 Response regulator receiver domain AMIR_RS03070 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS03075 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS03075 PF00672 HAMP domain AMIR_RS03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS03080 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03085 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03090 PF01547 Bacterial extracellular solute-binding protein AMIR_RS03095 PF02449 Beta-galactosidase AMIR_RS03095 PF08532 Beta-galactosidase trimerisation domain AMIR_RS03095 PF08533 Beta-galactosidase C-terminal domain AMIR_RS03100 PF00455 AMIR_RS03100 AMIR_RS03100 PF08220 DeoR-like helix-turn-helix domain AMIR_RS03105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMIR_RS03105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMIR_RS03110 PF13180 PDZ domain AMIR_RS03110 PF13365 Trypsin-like peptidase domain AMIR_RS03120 PF00994 Probable molybdopterin binding domain AMIR_RS03125 PF01741 Large-conductance mechanosensitive channel, MscL AMIR_RS03130 PF08666 SAF domain AMIR_RS03140 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMIR_RS03145 PF00483 Nucleotidyl transferase AMIR_RS03150 PF00994 Probable molybdopterin binding domain AMIR_RS03150 PF03453 MoeA N-terminal region (domain I and II) AMIR_RS03150 PF03454 MoeA C-terminal region (domain IV) AMIR_RS03155 PF13302 Acetyltransferase (GNAT) domain AMIR_RS03170 PF00027 Cyclic nucleotide-binding domain AMIR_RS03180 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS03180 PF13361 UvrD-like helicase C-terminal domain AMIR_RS03185 PF00069 Protein kinase domain AMIR_RS03190 PF02366 AMIR_RS03190 AMIR_RS03190 PF16192 AMIR_RS03190 AMIR_RS03195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS03220 PF09334 tRNA synthetases class I (M) AMIR_RS03225 PF01026 TatD related DNase AMIR_RS03230 PF03990 AMIR_RS03230 AMIR_RS03230 PF06737 Transglycosylase-like domain AMIR_RS03230 PF07501 G5 domain AMIR_RS03235 PF00398 Ribosomal RNA adenine dimethylase AMIR_RS03240 PF00005 ABC transporter AMIR_RS03240 PF09383 NIL domain AMIR_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03250 PF03180 NLPA lipoprotein AMIR_RS03255 PF00288 GHMP kinases N terminal domain AMIR_RS03255 PF08544 GHMP kinases C terminal AMIR_RS03260 PF00005 ABC transporter AMIR_RS03260 PF12848 ABC transporter AMIR_RS03265 PF05103 DivIVA protein AMIR_RS03280 PF00501 AMP-binding enzyme AMIR_RS03280 PF14535 AMP-binding enzyme C-terminal domain AMIR_RS03285 PF01195 Peptidyl-tRNA hydrolase AMIR_RS03295 PF01386 Ribosomal L25p family AMIR_RS03295 PF14693 Ribosomal protein TL5, C-terminal domain AMIR_RS03300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIR_RS03300 PF14572 Phosphoribosyl synthetase-associated domain AMIR_RS03305 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS03305 PF12804 MobA-like NTP transferase domain AMIR_RS03310 PF00990 GGDEF domain AMIR_RS03320 PF00326 Prolyl oligopeptidase family AMIR_RS03325 PF00487 AMIR_RS03325 AMIR_RS03330 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS03335 PF14124 AMIR_RS03335 AMIR_RS03340 PF07995 Glucose / Sorbosone dehydrogenase AMIR_RS03350 PF00270 DEAD/DEAH box helicase AMIR_RS03350 PF00271 Helicase conserved C-terminal domain AMIR_RS03350 PF02559 CarD-like/TRCF domain AMIR_RS03350 PF03461 TRCF domain AMIR_RS03360 PF03819 MazG nucleotide pyrophosphohydrolase domain AMIR_RS03365 PF03572 Peptidase family S41 AMIR_RS03365 PF07676 WD40-like Beta Propeller Repeat AMIR_RS03365 PF14684 Tricorn protease C1 domain AMIR_RS03365 PF14685 Tricorn protease PDZ domain AMIR_RS03375 PF13432 Tetratricopeptide repeat AMIR_RS03380 PF00113 Enolase, C-terminal TIM barrel domain AMIR_RS03380 PF03952 Enolase, N-terminal domain AMIR_RS03385 PF04977 Septum formation initiator AMIR_RS03390 PF04417 AMIR_RS03390 AMIR_RS03400 PF02541 Ppx/GppA phosphatase family AMIR_RS03405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03415 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03415 PF12911 AMIR_RS03415 AMIR_RS03420 PF00005 ABC transporter AMIR_RS03420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03425 PF00005 ABC transporter AMIR_RS03425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03430 PF00450 Serine carboxypeptidase AMIR_RS03435 PF03167 Uracil DNA glycosylase superfamily AMIR_RS03440 PF13559 AMIR_RS03440 AMIR_RS03450 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS03455 PF01882 AMIR_RS03455 AMIR_RS03465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS03475 PF00881 Nitroreductase family AMIR_RS03485 PF05960 Bacterial protein of unknown function (DUF885) AMIR_RS03490 PF06445 GyrI-like small molecule binding domain AMIR_RS03500 PF04203 Sortase family AMIR_RS03510 PF12811 AMIR_RS03510 AMIR_RS03520 PF00108 Thiolase, N-terminal domain AMIR_RS03520 PF02803 Thiolase, C-terminal domain AMIR_RS03525 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS03525 PF00571 CBS domain AMIR_RS03535 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS03540 PF10041 AMIR_RS03540 AMIR_RS03550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS03550 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS03555 PF01037 AsnC family AMIR_RS03555 PF13404 AsnC-type helix-turn-helix domain AMIR_RS03560 PF01272 Transcription elongation factor, GreA/GreB, C-term AMIR_RS03560 PF03449 Transcription elongation factor, N-terminal AMIR_RS03565 PF14155 AMIR_RS03565 AMIR_RS03570 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS03585 PF03190 Protein of unknown function, DUF255 AMIR_RS03590 PF03006 AMIR_RS03590 AMIR_RS03595 PF01255 Putative undecaprenyl diphosphate synthase AMIR_RS03610 PF02562 PhoH-like protein AMIR_RS03610 PF13638 PIN domain AMIR_RS03615 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS03615 PF00571 CBS domain AMIR_RS03620 PF01068 ATP dependent DNA ligase domain AMIR_RS03620 PF04675 DNA ligase N terminus AMIR_RS03620 PF04679 ATP dependent DNA ligase C terminal region AMIR_RS03625 PF00206 Lyase AMIR_RS03625 PF10415 Fumarase C C-terminus AMIR_RS03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS03635 PF03734 L,D-transpeptidase catalytic domain AMIR_RS03640 PF00089 Trypsin AMIR_RS03645 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMIR_RS03650 PF02609 Exonuclease VII small subunit AMIR_RS03660 PF02601 AMIR_RS03660 AMIR_RS03660 PF13742 AMIR_RS03660 AMIR_RS03670 PF02401 LytB protein AMIR_RS03680 PF02646 AMIR_RS03680 AMIR_RS03685 PF00149 Calcineurin-like phosphoesterase AMIR_RS03690 PF13476 AAA domain AMIR_RS03690 PF13558 Putative exonuclease SbcCD, C subunit AMIR_RS03695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMIR_RS03700 PF02805 Metal binding domain of Ada AMIR_RS03700 PF06029 AlkA N-terminal domain AMIR_RS03700 PF12833 Helix-turn-helix domain AMIR_RS03705 PF01926 50S ribosome-binding GTPase AMIR_RS03705 PF06071 Protein of unknown function (DUF933) AMIR_RS03710 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMIR_RS03720 PF14016 AMIR_RS03720 AMIR_RS03725 PF09076 Beta/Gamma crystallin AMIR_RS03730 PF09076 Beta/Gamma crystallin AMIR_RS03735 PF09594 AMIR_RS03735 AMIR_RS03745 PF01329 Pterin 4 alpha carbinolamine dehydratase AMIR_RS03750 PF13343 Bacterial extracellular solute-binding protein AMIR_RS03755 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03760 PF00005 ABC transporter AMIR_RS03765 PF12679 AMIR_RS03765 AMIR_RS03775 PF00005 ABC transporter AMIR_RS03780 PF03888 MucB/RseB family AMIR_RS03785 PF00072 Response regulator receiver domain AMIR_RS03785 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS03790 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS03790 PF00672 HAMP domain AMIR_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS03795 PF00293 NUDIX domain AMIR_RS03800 PF00579 tRNA synthetases class I (W and Y) AMIR_RS03805 PF03795 YCII-related domain AMIR_RS03810 PF00009 Elongation factor Tu GTP binding domain AMIR_RS03810 PF00679 Elongation factor G C-terminus AMIR_RS03810 PF03144 Elongation factor Tu domain 2 AMIR_RS03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS03830 PF12911 AMIR_RS03830 AMIR_RS03835 PF00005 ABC transporter AMIR_RS03835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03840 PF00005 ABC transporter AMIR_RS03840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS03845 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS03860 PF00583 Acetyltransferase (GNAT) family AMIR_RS03865 PF00037 4Fe-4S binding domain AMIR_RS03870 PF00155 Aminotransferase class I and II AMIR_RS03875 PF14602 Hexapeptide repeat of succinyl-transferase AMIR_RS03875 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMIR_RS03880 PF01546 Peptidase family M20/M25/M40 AMIR_RS03880 PF07687 Peptidase dimerisation domain AMIR_RS03885 PF03641 Possible lysine decarboxylase AMIR_RS03890 PF03641 Possible lysine decarboxylase AMIR_RS03895 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIR_RS03895 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS03900 PF00809 Pterin binding enzyme AMIR_RS03905 PF03551 Transcriptional regulator PadR-like family AMIR_RS03915 PF10604 Polyketide cyclase / dehydrase and lipid transport AMIR_RS03920 PF03352 Methyladenine glycosylase AMIR_RS03925 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS03925 PF13305 WHG domain AMIR_RS03930 PF00107 Zinc-binding dehydrogenase AMIR_RS03930 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS03935 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS03935 PF13305 WHG domain AMIR_RS03945 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS03950 PF07848 PaaX-like protein AMIR_RS03950 PF08223 PaaX-like protein C-terminal domain AMIR_RS03955 PF00883 Cytosol aminopeptidase family, catalytic domain AMIR_RS03965 PF07690 Major Facilitator Superfamily AMIR_RS03980 PF00534 Glycosyl transferases group 1 AMIR_RS03980 PF13439 Glycosyltransferase Family 4 AMIR_RS03985 PF00483 Nucleotidyl transferase AMIR_RS03990 PF04542 Sigma-70 region 2 AMIR_RS03990 PF08281 Sigma-70, region 4 AMIR_RS04000 PF13180 PDZ domain AMIR_RS04000 PF13365 Trypsin-like peptidase domain AMIR_RS04005 PF02416 mttA/Hcf106 family AMIR_RS04010 PF01883 Domain of unknown function DUF59 AMIR_RS04010 PF10609 ParA/MinD ATPase like AMIR_RS04015 PF12802 MarR family AMIR_RS04020 PF06210 AMIR_RS04020 AMIR_RS04025 PF00571 CBS domain AMIR_RS04025 PF03448 MgtE intracellular N domain AMIR_RS04030 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMIR_RS04040 PF03328 HpcH/HpaI aldolase/citrate lyase family AMIR_RS04050 PF01547 Bacterial extracellular solute-binding protein AMIR_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04065 PF00005 ABC transporter AMIR_RS04070 PF00106 short chain dehydrogenase AMIR_RS04080 PF03551 Transcriptional regulator PadR-like family AMIR_RS04085 PF10094 AMIR_RS04085 AMIR_RS04090 PF01544 CorA-like Mg2+ transporter protein AMIR_RS04095 PF10094 AMIR_RS04095 AMIR_RS04100 PF03703 AMIR_RS04100 AMIR_RS04105 PF02811 PHP domain AMIR_RS04110 PF12705 PD-(D/E)XK nuclease superfamily AMIR_RS04115 PF12697 Alpha/beta hydrolase family AMIR_RS04120 PF13360 PQQ-like domain AMIR_RS04125 PF00270 DEAD/DEAH box helicase AMIR_RS04125 PF00271 Helicase conserved C-terminal domain AMIR_RS04130 PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like AMIR_RS04135 PF11305 AMIR_RS04135 AMIR_RS04145 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS04150 PF11583 P-aminobenzoate N-oxygenase AurF AMIR_RS04155 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS04160 PF00561 alpha/beta hydrolase fold AMIR_RS04165 PF11350 AMIR_RS04165 AMIR_RS04170 PF00581 Rhodanese-like domain AMIR_RS04170 PF00899 ThiF family AMIR_RS04180 PF00384 Molybdopterin oxidoreductase AMIR_RS04180 PF01568 Molydopterin dinucleotide binding domain AMIR_RS04185 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS04190 PF07690 Major Facilitator Superfamily AMIR_RS04195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS04195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS04195 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS04200 PF13806 Rieske-like [2Fe-2S] domain AMIR_RS04205 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS04205 PF02602 Uroporphyrinogen-III synthase HemD AMIR_RS04210 PF01903 CbiX AMIR_RS04225 PF00072 Response regulator receiver domain AMIR_RS04225 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS04230 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS04230 PF00672 HAMP domain AMIR_RS04230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS04240 PF02254 TrkA-N domain AMIR_RS04240 PF07885 Ion channel AMIR_RS04245 PF01546 Peptidase family M20/M25/M40 AMIR_RS04245 PF07687 Peptidase dimerisation domain AMIR_RS04260 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04260 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04265 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04265 PF12705 PD-(D/E)XK nuclease superfamily AMIR_RS04265 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMIR_RS04275 PF14559 Tetratricopeptide repeat AMIR_RS04280 PF00106 short chain dehydrogenase AMIR_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS04285 PF03466 LysR substrate binding domain AMIR_RS04290 PF04228 AMIR_RS04290 AMIR_RS04295 PF04228 AMIR_RS04295 AMIR_RS04300 PF09972 AMIR_RS04300 AMIR_RS04305 PF00216 Bacterial DNA-binding protein AMIR_RS04310 PF07336 Protein of unknown function (DUF1470) AMIR_RS04310 PF11706 CGNR zinc finger AMIR_RS04315 PF00561 alpha/beta hydrolase fold AMIR_RS04320 PF00675 Insulinase (Peptidase family M16) AMIR_RS04320 PF05193 Peptidase M16 inactive domain AMIR_RS04325 PF00675 Insulinase (Peptidase family M16) AMIR_RS04325 PF05193 Peptidase M16 inactive domain AMIR_RS04330 PF00293 NUDIX domain AMIR_RS04330 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMIR_RS04330 PF09297 NADH pyrophosphatase zinc ribbon domain AMIR_RS04335 PF00480 ROK family AMIR_RS04340 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS04340 PF16859 AMIR_RS04340 AMIR_RS04345 PF01979 Amidohydrolase family AMIR_RS04350 PF13558 Putative exonuclease SbcCD, C subunit AMIR_RS04355 PF09661 AMIR_RS04355 AMIR_RS04360 PF09660 AMIR_RS04360 AMIR_RS04365 PF03186 AMIR_RS04365 AMIR_RS04370 PF02104 AMIR_RS04370 AMIR_RS04375 PF03881 Fructosamine kinase AMIR_RS04380 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIR_RS04385 PF14279 AMIR_RS04385 AMIR_RS04390 PF00155 Aminotransferase class I and II AMIR_RS04395 PF01784 NIF3 (NGG1p interacting factor 3) AMIR_RS04400 PF02591 Putative zinc ribbon domain AMIR_RS04405 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS04405 PF13456 Reverse transcriptase-like AMIR_RS04410 PF03358 NADPH-dependent FMN reductase AMIR_RS04430 PF12846 AAA-like domain AMIR_RS04445 PF00877 NlpC/P60 family AMIR_RS04460 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS04470 PF00561 alpha/beta hydrolase fold AMIR_RS04475 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS04480 PF13476 AAA domain AMIR_RS04495 PF13476 AAA domain AMIR_RS04500 PF04055 Radical SAM superfamily AMIR_RS04500 PF13186 Iron-sulfur cluster-binding domain AMIR_RS04510 PF13560 Helix-turn-helix domain AMIR_RS04515 PF04149 AMIR_RS04515 AMIR_RS04520 PF02548 Ketopantoate hydroxymethyltransferase AMIR_RS04530 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS04530 PF01336 OB-fold nucleic acid binding domain AMIR_RS04530 PF09924 Uncharacterized conserved protein (DUF2156) AMIR_RS04530 PF16995 AMIR_RS04530 AMIR_RS04535 PF00561 alpha/beta hydrolase fold AMIR_RS04540 PF00795 Carbon-nitrogen hydrolase AMIR_RS04540 PF02540 NAD synthase AMIR_RS04545 PF00120 Glutamine synthetase, catalytic domain AMIR_RS04545 PF03951 Glutamine synthetase, beta-Grasp domain AMIR_RS04565 PF01384 AMIR_RS04565 AMIR_RS04575 PF03710 Glutamate-ammonia ligase adenylyltransferase AMIR_RS04575 PF08335 GlnD PII-uridylyltransferase AMIR_RS04590 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS04595 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS04615 PF01580 FtsK/SpoIIIE family AMIR_RS04625 PF12728 Helix-turn-helix domain AMIR_RS04630 PF00589 Phage integrase family AMIR_RS04630 PF14659 Phage integrase, N-terminal SAM-like domain AMIR_RS04635 PF00120 Glutamine synthetase, catalytic domain AMIR_RS04635 PF03951 Glutamine synthetase, beta-Grasp domain AMIR_RS04640 PF06271 AMIR_RS04640 AMIR_RS04645 PF13829 AMIR_RS04645 AMIR_RS04650 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS04650 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04655 PF00570 HRDC domain AMIR_RS04655 PF13361 UvrD-like helicase C-terminal domain AMIR_RS04660 PF02467 AMIR_RS04660 AMIR_RS04670 PF08241 Methyltransferase domain AMIR_RS04685 PF03109 AMIR_RS04685 AMIR_RS04690 PF00899 ThiF family AMIR_RS04695 PF01863 Protein of unknown function DUF45 AMIR_RS04700 PF10103 Uncharacterised conserved protein (DUF2342) AMIR_RS04705 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIR_RS04705 PF13180 PDZ domain AMIR_RS04715 PF03699 AMIR_RS04715 AMIR_RS04740 PF03551 Transcriptional regulator PadR-like family AMIR_RS04745 PF00472 RF-1 domain AMIR_RS04745 PF03462 PCRF domain AMIR_RS04750 PF00005 ABC transporter AMIR_RS04755 PF02687 AMIR_RS04755 AMIR_RS04760 PF01668 SmpB protein AMIR_RS04765 PF00072 Response regulator receiver domain AMIR_RS04765 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS04770 PF07730 Histidine kinase AMIR_RS04770 PF13796 AMIR_RS04770 AMIR_RS04780 PF00271 Helicase conserved C-terminal domain AMIR_RS04780 PF04408 Helicase associated domain (HA2) AMIR_RS04780 PF08482 AMIR_RS04780 AMIR_RS04785 PF00535 Glycosyl transferase family 2 AMIR_RS04790 PF00583 Acetyltransferase (GNAT) family AMIR_RS04795 PF00083 Sugar (and other) transporter AMIR_RS04795 PF07690 Major Facilitator Superfamily AMIR_RS04800 PF13462 Thioredoxin AMIR_RS04805 PF00501 AMP-binding enzyme AMIR_RS04805 PF14535 AMP-binding enzyme C-terminal domain AMIR_RS04815 PF00069 Protein kinase domain AMIR_RS04820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMIR_RS04820 PF04851 Type III restriction enzyme, res subunit AMIR_RS04825 PF02384 N-6 DNA Methylase AMIR_RS04825 PF12161 HsdM N-terminal domain AMIR_RS04830 PF02384 N-6 DNA Methylase AMIR_RS04855 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS04860 PF02310 B12 binding domain AMIR_RS04860 PF02607 B12 binding domain AMIR_RS04865 PF13466 STAS domain AMIR_RS04875 PF01547 Bacterial extracellular solute-binding protein AMIR_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS04895 PF05336 Domain of unknown function (DUF718) AMIR_RS04900 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS04900 PF13377 Periplasmic binding protein-like domain AMIR_RS04915 PF00293 NUDIX domain AMIR_RS04930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS04935 PF01008 Initiation factor 2 subunit family AMIR_RS04945 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS04950 PF03079 ARD/ARD' family AMIR_RS04955 PF01636 Phosphotransferase enzyme family AMIR_RS04960 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS04965 PF12710 haloacid dehalogenase-like hydrolase AMIR_RS04965 PF13740 ACT domain AMIR_RS04970 PF01981 Peptidyl-tRNA hydrolase PTH2 AMIR_RS04985 PF00614 Phospholipase D Active site motif AMIR_RS04985 PF13091 PLD-like domain AMIR_RS04990 PF00270 DEAD/DEAH box helicase AMIR_RS04990 PF13307 Helicase C-terminal domain AMIR_RS04995 PF02632 BioY family AMIR_RS05000 PF13641 Glycosyltransferase like family 2 AMIR_RS05020 PF02350 UDP-N-acetylglucosamine 2-epimerase AMIR_RS05030 PF00857 Isochorismatase family AMIR_RS05035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIR_RS05040 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMIR_RS05045 PF09438 AMIR_RS05045 AMIR_RS05060 PF14464 Prokaryotic homologs of the JAB domain AMIR_RS05065 PF02597 ThiS family AMIR_RS05070 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS05075 PF12706 Beta-lactamase superfamily domain AMIR_RS05080 PF08450 SMP-30/Gluconolaconase/LRE-like region AMIR_RS05085 PF01694 Rhomboid family AMIR_RS05090 PF01177 Asp/Glu/Hydantoin racemase AMIR_RS05095 PF12706 Beta-lactamase superfamily domain AMIR_RS05100 PF01814 Hemerythrin HHE cation binding domain AMIR_RS05105 PF02566 OsmC-like protein AMIR_RS05115 PF01138 3' exoribonuclease family, domain 1 AMIR_RS05115 PF03725 3' exoribonuclease family, domain 2 AMIR_RS05120 PF01725 Ham1 family AMIR_RS05130 PF00578 AhpC/TSA family AMIR_RS05140 PF00296 Luciferase-like monooxygenase AMIR_RS05145 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS05150 PF09335 AMIR_RS05150 AMIR_RS05155 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS05155 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS05165 PF12277 AMIR_RS05165 AMIR_RS05170 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS05170 PF16859 AMIR_RS05170 AMIR_RS05175 PF00756 Putative esterase AMIR_RS05180 PF00107 Zinc-binding dehydrogenase AMIR_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS05180 PF13823 Alcohol dehydrogenase GroES-associated AMIR_RS05185 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS05190 PF08245 Mur ligase middle domain AMIR_RS05190 PF08353 AMIR_RS05190 AMIR_RS05195 PF13560 Helix-turn-helix domain AMIR_RS05200 PF02698 DUF218 domain AMIR_RS05205 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS05205 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS05210 PF02091 Glycyl-tRNA synthetase alpha subunit AMIR_RS05210 PF02092 AMIR_RS05210 AMIR_RS05215 PF00082 Subtilase family AMIR_RS05220 PF13407 Periplasmic binding protein domain AMIR_RS05230 PF00313 'Cold-shock' DNA-binding domain AMIR_RS05235 PF12680 SnoaL-like domain AMIR_RS05240 PF08305 NPCBM/NEW2 domain AMIR_RS05240 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase AMIR_RS05240 PF16499 AMIR_RS05240 AMIR_RS05245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS05250 PF04434 AMIR_RS05250 AMIR_RS05255 PF00176 SNF2 family N-terminal domain AMIR_RS05255 PF00271 Helicase conserved C-terminal domain AMIR_RS05255 PF12419 AMIR_RS05255 AMIR_RS05270 PF00145 C-5 cytosine-specific DNA methylase AMIR_RS05275 PF03852 DNA mismatch endonuclease Vsr AMIR_RS05280 PF10979 AMIR_RS05280 AMIR_RS05295 PF03734 L,D-transpeptidase catalytic domain AMIR_RS05300 PF00005 ABC transporter AMIR_RS05300 PF12848 ABC transporter AMIR_RS05310 PF00929 Exonuclease AMIR_RS05315 PF07690 Major Facilitator Superfamily AMIR_RS05320 PF01965 DJ-1/PfpI family AMIR_RS05320 PF12833 Helix-turn-helix domain AMIR_RS05325 PF00455 AMIR_RS05325 AMIR_RS05325 PF08220 DeoR-like helix-turn-helix domain AMIR_RS05330 PF00294 pfkB family carbohydrate kinase AMIR_RS05335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMIR_RS05340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMIR_RS05340 PF02378 Phosphotransferase system, EIIC AMIR_RS05345 PF03703 AMIR_RS05345 AMIR_RS05350 PF03703 AMIR_RS05350 AMIR_RS05355 PF00501 AMP-binding enzyme AMIR_RS05355 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS05365 PF01047 MarR family AMIR_RS05370 PF02525 Flavodoxin-like fold AMIR_RS05375 PF13432 Tetratricopeptide repeat AMIR_RS05385 PF02355 Protein export membrane protein AMIR_RS05385 PF07549 SecD/SecF GG Motif AMIR_RS05390 PF01070 FMN-dependent dehydrogenase AMIR_RS05400 PF12833 Helix-turn-helix domain AMIR_RS05405 PF00722 Glycosyl hydrolases family 16 AMIR_RS05405 PF03422 Carbohydrate binding module (family 6) AMIR_RS05410 PF00476 DNA polymerase family A AMIR_RS05420 PF13649 Methyltransferase domain AMIR_RS05425 PF01619 Proline dehydrogenase AMIR_RS05430 PF00171 Aldehyde dehydrogenase family AMIR_RS05435 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS05440 PF02096 60Kd inner membrane protein AMIR_RS05455 PF04167 Protein of unknown function (DUF402) AMIR_RS05465 PF00171 Aldehyde dehydrogenase family AMIR_RS05470 PF05610 AMIR_RS05470 AMIR_RS05475 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIR_RS05475 PF02838 Glycosyl hydrolase family 20, domain 2 AMIR_RS05480 PF01928 CYTH domain AMIR_RS05480 PF05235 CHAD domain AMIR_RS05490 PF07510 AMIR_RS05490 AMIR_RS05495 PF00551 Formyl transferase AMIR_RS05495 PF02911 Formyl transferase, C-terminal domain AMIR_RS05500 PF07969 Amidohydrolase family AMIR_RS05515 PF00574 Clp protease AMIR_RS05520 PF00574 Clp protease AMIR_RS05525 PF13560 Helix-turn-helix domain AMIR_RS05530 PF00293 NUDIX domain AMIR_RS05540 PF01636 Phosphotransferase enzyme family AMIR_RS05580 PF02467 AMIR_RS05580 AMIR_RS05595 PF12728 Helix-turn-helix domain AMIR_RS05600 PF00589 Phage integrase family AMIR_RS05610 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS05610 PF13377 Periplasmic binding protein-like domain AMIR_RS05615 PF07690 Major Facilitator Superfamily AMIR_RS05630 PF05425 AMIR_RS05630 AMIR_RS05630 PF09678 AMIR_RS05630 AMIR_RS05635 PF01061 AMIR_RS05635 AMIR_RS05640 PF00005 ABC transporter AMIR_RS05645 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS05650 PF00436 Single-strand binding protein family AMIR_RS05655 PF00005 ABC transporter AMIR_RS05655 PF12848 ABC transporter AMIR_RS05665 PF05088 AMIR_RS05665 AMIR_RS05670 PF00128 Alpha amylase, catalytic domain AMIR_RS05670 PF00686 Starch binding domain AMIR_RS05670 PF02806 Alpha amylase, C-terminal all-beta domain AMIR_RS05675 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS05675 PF13377 Periplasmic binding protein-like domain AMIR_RS05680 PF13279 Thioesterase-like superfamily AMIR_RS05690 PF00128 Alpha amylase, catalytic domain AMIR_RS05690 PF11941 Domain of unknown function (DUF3459) AMIR_RS05695 PF01152 Bacterial-like globin AMIR_RS05700 PF00924 Mechanosensitive ion channel AMIR_RS05705 PF00326 Prolyl oligopeptidase family AMIR_RS05705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMIR_RS05710 PF14279 AMIR_RS05710 AMIR_RS05725 PF17174 AMIR_RS05725 AMIR_RS05730 PF01433 Peptidase family M1 AMIR_RS05730 PF11838 ERAP1-like C-terminal domain AMIR_RS05735 PF01323 DSBA-like thioredoxin domain AMIR_RS05740 PF04029 2-phosphosulpholactate phosphatase AMIR_RS05745 PF02502 Ribose/Galactose Isomerase AMIR_RS05755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS05755 PF06827 Zinc finger found in FPG and IleRS AMIR_RS05755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS05765 PF13527 Acetyltransferase (GNAT) domain AMIR_RS05765 PF13530 Sterol carrier protein domain AMIR_RS05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS05785 PF03466 LysR substrate binding domain AMIR_RS05790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS05790 PF05697 Bacterial trigger factor protein (TF) AMIR_RS05790 PF05698 Bacterial trigger factor protein (TF) C-terminus AMIR_RS05795 PF00574 Clp protease AMIR_RS05800 PF06689 ClpX C4-type zinc finger AMIR_RS05800 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS05800 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS05805 PF06821 Serine hydrolase AMIR_RS05810 PF00756 Putative esterase AMIR_RS05815 PF02634 FdhD/NarQ family AMIR_RS05820 PF07690 Major Facilitator Superfamily AMIR_RS05825 PF13450 NAD(P)-binding Rossmann-like domain AMIR_RS05835 PF00384 Molybdopterin oxidoreductase AMIR_RS05835 PF01568 Molydopterin dinucleotide binding domain AMIR_RS05850 PF00133 tRNA synthetases class I (I, L, M and V) AMIR_RS05850 PF08264 Anticodon-binding domain of tRNA AMIR_RS05850 PF10458 Valyl tRNA synthetase tRNA binding arm AMIR_RS05855 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS05855 PF08245 Mur ligase middle domain AMIR_RS05860 PF14017 AMIR_RS05860 AMIR_RS05865 PF09423 PhoD-like phosphatase AMIR_RS05870 PF00128 Alpha amylase, catalytic domain AMIR_RS05870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS05870 PF03714 Bacterial pullanase-associated domain AMIR_RS05870 PF11852 Domain of unknown function (DUF3372) AMIR_RS05880 PF00334 Nucleoside diphosphate kinase AMIR_RS05885 PF00005 ABC transporter AMIR_RS05890 PF01061 AMIR_RS05890 AMIR_RS05895 PF01061 AMIR_RS05895 AMIR_RS05900 PF04055 Radical SAM superfamily AMIR_RS05905 PF04542 Sigma-70 region 2 AMIR_RS05905 PF04545 Sigma-70, region 4 AMIR_RS05910 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS05910 PF13191 AAA ATPase domain AMIR_RS05915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIR_RS05915 PF10531 SLBB domain AMIR_RS05920 PF01794 AMIR_RS05920 AMIR_RS05925 PF02424 ApbE family AMIR_RS05930 PF00082 Subtilase family AMIR_RS05935 PF10105 AMIR_RS05935 AMIR_RS05940 PF04760 Translation initiation factor IF-2, N-terminal region AMIR_RS05940 PF10150 Ribonuclease E/G family AMIR_RS05945 PF00829 Ribosomal prokaryotic L21 protein AMIR_RS05950 PF01016 Ribosomal L27 protein AMIR_RS05955 PF01018 GTP1/OBG AMIR_RS05955 PF01926 50S ribosome-binding GTPase AMIR_RS05955 PF09269 Domain of unknown function (DUF1967) AMIR_RS05960 PF00696 Amino acid kinase family AMIR_RS05960 PF01472 PUA domain AMIR_RS05965 PF07690 Major Facilitator Superfamily AMIR_RS05970 PF13302 Acetyltransferase (GNAT) domain AMIR_RS05975 PF00270 DEAD/DEAH box helicase AMIR_RS05975 PF00271 Helicase conserved C-terminal domain AMIR_RS05975 PF16124 AMIR_RS05975 AMIR_RS05980 PF00171 Aldehyde dehydrogenase family AMIR_RS05985 PF00067 Cytochrome P450 AMIR_RS05990 PF13370 4Fe-4S single cluster domain AMIR_RS05995 PF01467 Cytidylyltransferase AMIR_RS06000 PF02410 Oligomerisation domain AMIR_RS06005 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS06010 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS06015 PF02645 Uncharacterised protein, DegV family COG1307 AMIR_RS06020 PF10531 SLBB domain AMIR_RS06020 PF12836 Helix-hairpin-helix motif AMIR_RS06025 PF00753 Metallo-beta-lactamase superfamily AMIR_RS06025 PF03772 AMIR_RS06025 AMIR_RS06035 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS06050 PF01649 Ribosomal protein S20 AMIR_RS06055 PF01925 AMIR_RS06055 AMIR_RS06070 PF01145 SPFH domain / Band 7 family AMIR_RS06080 PF14403 AMIR_RS06080 AMIR_RS06085 PF04168 AMIR_RS06085 AMIR_RS06090 PF01841 Transglutaminase-like superfamily AMIR_RS06090 PF08379 AMIR_RS06090 AMIR_RS06095 PF00009 Elongation factor Tu GTP binding domain AMIR_RS06095 PF00679 Elongation factor G C-terminus AMIR_RS06095 PF06421 GTP-binding protein LepA C-terminus AMIR_RS06100 PF02452 PemK-like protein AMIR_RS06110 PF13328 HD domain AMIR_RS06115 PF00704 Glycosyl hydrolases family 18 AMIR_RS06115 PF02018 Carbohydrate binding domain AMIR_RS06120 PF03060 Nitronate monooxygenase AMIR_RS06125 PF05960 Bacterial protein of unknown function (DUF885) AMIR_RS06130 PF13520 Amino acid permease AMIR_RS06135 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS06140 PF00107 Zinc-binding dehydrogenase AMIR_RS06150 PF00545 ribonuclease AMIR_RS06155 PF01337 Barstar (barnase inhibitor) AMIR_RS06165 PF07927 YcfA-like protein AMIR_RS06170 PF01903 CbiX AMIR_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS06180 PF00005 ABC transporter AMIR_RS06185 PF13379 NMT1-like family AMIR_RS06190 PF00009 Elongation factor Tu GTP binding domain AMIR_RS06195 PF01507 Phosphoadenosine phosphosulfate reductase family AMIR_RS06200 PF01507 Phosphoadenosine phosphosulfate reductase family AMIR_RS06210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIR_RS06210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS06215 PF04055 Radical SAM superfamily AMIR_RS06220 PF01628 HrcA protein C terminal domain AMIR_RS06220 PF08220 DeoR-like helix-turn-helix domain AMIR_RS06225 PF00226 DnaJ domain AMIR_RS06225 PF00684 DnaJ central domain AMIR_RS06225 PF01556 DnaJ C terminal domain AMIR_RS06230 PF04452 RNA methyltransferase AMIR_RS06235 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS06240 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS06245 PF00326 Prolyl oligopeptidase family AMIR_RS06250 PF01230 HIT domain AMIR_RS06255 PF13673 Acetyltransferase (GNAT) domain AMIR_RS06260 PF02562 PhoH-like protein AMIR_RS06265 PF02130 Uncharacterized protein family UPF0054 AMIR_RS06270 PF00571 CBS domain AMIR_RS06270 PF01595 AMIR_RS06270 AMIR_RS06270 PF03471 Transporter associated domain AMIR_RS06285 PF01926 50S ribosome-binding GTPase AMIR_RS06285 PF07650 KH domain AMIR_RS06290 PF02565 Recombination protein O C terminal AMIR_RS06290 PF11967 Recombination protein O N terminal AMIR_RS06295 PF01255 Putative undecaprenyl diphosphate synthase AMIR_RS06310 PF03773 AMIR_RS06310 AMIR_RS06315 PF09323 AMIR_RS06315 AMIR_RS06320 PF01475 Ferric uptake regulator family AMIR_RS06325 PF01022 Bacterial regulatory protein, arsR family AMIR_RS06330 PF03992 Antibiotic biosynthesis monooxygenase AMIR_RS06345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS06345 PF03129 Anticodon binding domain AMIR_RS06355 PF00484 Carbonic anhydrase AMIR_RS06360 PF00916 AMIR_RS06360 AMIR_RS06365 PF00079 Serpin (serine protease inhibitor) AMIR_RS06370 PF01966 HD domain AMIR_RS06370 PF13286 Phosphohydrolase-associated domain AMIR_RS06375 PF02698 DUF218 domain AMIR_RS06380 PF03575 Peptidase family S51 AMIR_RS06385 PF04542 Sigma-70 region 2 AMIR_RS06385 PF08281 Sigma-70, region 4 AMIR_RS06390 PF01807 CHC2 zinc finger AMIR_RS06390 PF08275 DNA primase catalytic core, N-terminal domain AMIR_RS06390 PF08278 DNA primase DnaG DnaB-binding AMIR_RS06390 PF10410 DnaB-helicase binding domain of primase AMIR_RS06390 PF13662 Toprim domain AMIR_RS06400 PF09954 AMIR_RS06400 AMIR_RS06405 PF00293 NUDIX domain AMIR_RS06410 PF02698 DUF218 domain AMIR_RS06415 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS06415 PF07702 UTRA domain AMIR_RS06425 PF00293 NUDIX domain AMIR_RS06430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS06435 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS06435 PF07702 UTRA domain AMIR_RS06455 PF01580 FtsK/SpoIIIE family AMIR_RS06480 PF12728 Helix-turn-helix domain AMIR_RS06485 PF00589 Phage integrase family AMIR_RS06495 PF09995 AMIR_RS06495 AMIR_RS06510 PF13489 Methyltransferase domain AMIR_RS06520 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS06530 PF01522 Polysaccharide deacetylase AMIR_RS06530 PF13641 Glycosyltransferase like family 2 AMIR_RS06535 PF00067 Cytochrome P450 AMIR_RS06540 PF02898 Nitric oxide synthase, oxygenase domain AMIR_RS06545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS06545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS06550 PF03995 Peptidase inhibitor family I36 AMIR_RS06555 PF00563 EAL domain AMIR_RS06555 PF00990 GGDEF domain AMIR_RS06555 PF08448 PAS fold AMIR_RS06560 PF04672 S-adenosyl methyltransferase AMIR_RS06565 PF12802 MarR family AMIR_RS06570 PF02537 AMIR_RS06570 AMIR_RS06575 PF02537 AMIR_RS06575 AMIR_RS06580 PF13245 Part of AAA domain AMIR_RS06585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS06585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMIR_RS06595 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS06600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS06615 PF11343 AMIR_RS06615 AMIR_RS06620 PF00005 ABC transporter AMIR_RS06625 PF00005 ABC transporter AMIR_RS06625 PF00664 ABC transporter transmembrane region AMIR_RS06630 PF00069 Protein kinase domain AMIR_RS06640 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS06640 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS06645 PF00550 Phosphopantetheine attachment site AMIR_RS06650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS06650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIR_RS06655 PF00698 Acyl transferase domain AMIR_RS06660 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS06665 PF05552 Conserved TM helix AMIR_RS06670 PF04973 AMIR_RS06670 AMIR_RS06675 PF01547 Bacterial extracellular solute-binding protein AMIR_RS06685 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS06690 PF11253 AMIR_RS06690 AMIR_RS06695 PF00578 AhpC/TSA family AMIR_RS06715 PF03435 Saccharopine dehydrogenase AMIR_RS06720 PF04055 Radical SAM superfamily AMIR_RS06720 PF16881 AMIR_RS06720 AMIR_RS06725 PF00106 short chain dehydrogenase AMIR_RS06730 PF00296 Luciferase-like monooxygenase AMIR_RS06740 PF03099 Biotin/lipoate A/B protein ligase family AMIR_RS06745 PF13560 Helix-turn-helix domain AMIR_RS06750 PF12680 SnoaL-like domain AMIR_RS06760 PF01569 PAP2 superfamily AMIR_RS06765 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS06765 PF08338 Domain of unknown function (DUF1731) AMIR_RS06770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS06770 PF00364 Biotin-requiring enzyme AMIR_RS06770 PF02817 e3 binding domain AMIR_RS06775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS06775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS06785 PF13460 NADH(P)-binding AMIR_RS06790 PF00883 Cytosol aminopeptidase family, catalytic domain AMIR_RS06790 PF02789 Cytosol aminopeptidase family, N-terminal domain AMIR_RS06800 PF01063 Aminotransferase class IV AMIR_RS06805 PF02654 AMIR_RS06805 AMIR_RS06810 PF02277 Phosphoribosyltransferase AMIR_RS06815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMIR_RS06820 PF00248 Aldo/keto reductase family AMIR_RS06825 PF14430 AMIR_RS06825 AMIR_RS06830 PF14428 AMIR_RS06830 AMIR_RS06835 PF11241 AMIR_RS06835 AMIR_RS06840 PF01521 Iron-sulphur cluster biosynthesis AMIR_RS06850 PF00733 Asparagine synthase AMIR_RS06850 PF13537 Glutamine amidotransferase domain AMIR_RS06855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMIR_RS06855 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMIR_RS06860 PF12270 AMIR_RS06860 AMIR_RS06865 PF01553 Acyltransferase AMIR_RS06870 PF00591 Glycosyl transferase family, a/b domain AMIR_RS06870 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS06885 PF00510 Cytochrome c oxidase subunit III AMIR_RS06890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMIR_RS06895 PF00355 Rieske [2Fe-2S] domain AMIR_RS06900 PF13631 Cytochrome b(N-terminal)/b6/petB AMIR_RS06905 PF01037 AsnC family AMIR_RS06910 PF00929 Exonuclease AMIR_RS06910 PF01541 GIY-YIG catalytic domain AMIR_RS06915 PF05991 AMIR_RS06915 AMIR_RS06920 PF00877 NlpC/P60 family AMIR_RS06930 PF00534 Glycosyl transferases group 1 AMIR_RS06930 PF13439 Glycosyltransferase Family 4 AMIR_RS06935 PF00501 AMP-binding enzyme AMIR_RS06945 PF12850 Calcineurin-like phosphoesterase superfamily domain AMIR_RS06950 PF10604 Polyketide cyclase / dehydrase and lipid transport AMIR_RS06955 PF02374 Anion-transporting ATPase AMIR_RS06965 PF00480 ROK family AMIR_RS06970 PF13581 Histidine kinase-like ATPase domain AMIR_RS06970 PF14417 AMIR_RS06970 AMIR_RS06980 PF01553 Acyltransferase AMIR_RS06985 PF16473 AMIR_RS06985 AMIR_RS06990 PF00365 Phosphofructokinase AMIR_RS06995 PF01474 Class-II DAHP synthetase family AMIR_RS07000 PF00069 Protein kinase domain AMIR_RS07000 PF03793 PASTA domain AMIR_RS07010 PF09594 AMIR_RS07010 AMIR_RS07015 PF01593 Flavin containing amine oxidoreductase AMIR_RS07020 PF00348 Polyprenyl synthetase AMIR_RS07025 PF02219 Methylenetetrahydrofolate reductase AMIR_RS07030 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS07035 PF11353 AMIR_RS07035 AMIR_RS07040 PF05960 Bacterial protein of unknown function (DUF885) AMIR_RS07045 PF05257 CHAP domain AMIR_RS07050 PF00583 Acetyltransferase (GNAT) family AMIR_RS07055 PF04073 Aminoacyl-tRNA editing domain AMIR_RS07060 PF07398 AMIR_RS07060 AMIR_RS07060 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS07065 PF09423 PhoD-like phosphatase AMIR_RS07075 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07075 PF07729 FCD domain AMIR_RS07080 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS07085 PF00270 DEAD/DEAH box helicase AMIR_RS07085 PF00271 Helicase conserved C-terminal domain AMIR_RS07085 PF08494 AMIR_RS07085 AMIR_RS07095 PF00012 Hsp70 protein AMIR_RS07100 PF07690 Major Facilitator Superfamily AMIR_RS07105 PF11248 AMIR_RS07105 AMIR_RS07110 PF00154 recA bacterial DNA recombination protein AMIR_RS07115 PF02631 RecX family AMIR_RS07125 PF01081 KDPG and KHG aldolase AMIR_RS07130 PF00920 Dehydratase family AMIR_RS07145 PF00890 FAD binding domain AMIR_RS07145 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS07150 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIR_RS07150 PF13183 4Fe-4S dicluster domain AMIR_RS07155 PF03747 ADP-ribosylglycohydrolase AMIR_RS07170 PF02867 Ribonucleotide reductase, barrel domain AMIR_RS07170 PF08471 AMIR_RS07170 AMIR_RS07175 PF03477 ATP cone domain AMIR_RS07185 PF00717 Peptidase S24-like AMIR_RS07185 PF01726 LexA DNA binding domain AMIR_RS07195 PF01926 50S ribosome-binding GTPase AMIR_RS07195 PF13167 AMIR_RS07195 AMIR_RS07195 PF16360 AMIR_RS07195 AMIR_RS07200 PF12840 Helix-turn-helix domain AMIR_RS07205 PF05977 Transmembrane secretion effector AMIR_RS07210 PF01678 Diaminopimelate epimerase AMIR_RS07215 PF01715 IPP transferase AMIR_RS07225 PF03993 AMIR_RS07225 AMIR_RS07235 PF00919 Uncharacterized protein family UPF0004 AMIR_RS07235 PF04055 Radical SAM superfamily AMIR_RS07240 PF16868 AMIR_RS07240 AMIR_RS07245 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS07245 PF00672 HAMP domain AMIR_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS07250 PF00072 Response regulator receiver domain AMIR_RS07250 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS07255 PF00005 ABC transporter AMIR_RS07260 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS07265 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS07275 PF12787 AMIR_RS07275 AMIR_RS07285 PF07336 Protein of unknown function (DUF1470) AMIR_RS07285 PF11706 CGNR zinc finger AMIR_RS07290 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS07295 PF12006 AMIR_RS07295 AMIR_RS07300 PF04493 Endonuclease V AMIR_RS07305 PF02056 Family 4 glycosyl hydrolase AMIR_RS07305 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMIR_RS07310 PF00962 Adenosine/AMP deaminase AMIR_RS07315 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIR_RS07315 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS07320 PF13830 AMIR_RS07320 AMIR_RS07325 PF00326 Prolyl oligopeptidase family AMIR_RS07325 PF07676 WD40-like Beta Propeller Repeat AMIR_RS07330 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS07335 PF00288 GHMP kinases N terminal domain AMIR_RS07335 PF08544 GHMP kinases C terminal AMIR_RS07335 PF10509 Galactokinase galactose-binding signature AMIR_RS07340 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMIR_RS07340 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMIR_RS07340 PF04023 FeoA domain AMIR_RS07345 PF00581 Rhodanese-like domain AMIR_RS07355 PF00850 Histone deacetylase domain AMIR_RS07360 PF00583 Acetyltransferase (GNAT) family AMIR_RS07360 PF13380 CoA binding domain AMIR_RS07360 PF13549 ATP-grasp domain AMIR_RS07360 PF13607 Succinyl-CoA ligase like flavodoxin domain AMIR_RS07365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS07370 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07370 PF07702 UTRA domain AMIR_RS07390 PF01139 tRNA-splicing ligase RtcB AMIR_RS07395 PF01061 AMIR_RS07395 AMIR_RS07400 PF00005 ABC transporter AMIR_RS07405 PF00583 Acetyltransferase (GNAT) family AMIR_RS07410 PF13560 Helix-turn-helix domain AMIR_RS07415 PF04149 AMIR_RS07415 AMIR_RS07445 PF00171 Aldehyde dehydrogenase family AMIR_RS07450 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS07455 PF01614 Bacterial transcriptional regulator AMIR_RS07455 PF09339 IclR helix-turn-helix domain AMIR_RS07460 PF00701 Dihydrodipicolinate synthetase family AMIR_RS07465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS07465 PF13378 Enolase C-terminal domain-like AMIR_RS07485 PF05681 AMIR_RS07485 AMIR_RS07485 PF05683 Fumarase C-terminus AMIR_RS07490 PF00140 Sigma-70 factor, region 1 AMIR_RS07490 PF04539 Sigma-70 region 3 AMIR_RS07490 PF04542 Sigma-70 region 2 AMIR_RS07490 PF04545 Sigma-70, region 4 AMIR_RS07495 PF02580 D-Tyr-tRNA(Tyr) deacylase AMIR_RS07500 PF05175 Methyltransferase small domain AMIR_RS07505 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS07510 PF11298 AMIR_RS07510 AMIR_RS07515 PF00294 pfkB family carbohydrate kinase AMIR_RS07520 PF04227 Indigoidine synthase A like protein AMIR_RS07525 PF11238 AMIR_RS07525 AMIR_RS07530 PF03631 AMIR_RS07530 AMIR_RS07535 PF04851 Type III restriction enzyme, res subunit AMIR_RS07540 PF13407 Periplasmic binding protein domain AMIR_RS07545 PF00005 ABC transporter AMIR_RS07550 PF02653 AMIR_RS07550 AMIR_RS07555 PF00480 ROK family AMIR_RS07555 PF05331 AMIR_RS07555 AMIR_RS07570 PF00140 Sigma-70 factor, region 1 AMIR_RS07570 PF04539 Sigma-70 region 3 AMIR_RS07570 PF04542 Sigma-70 region 2 AMIR_RS07570 PF04545 Sigma-70, region 4 AMIR_RS07575 PF00480 ROK family AMIR_RS07580 PF00459 Inositol monophosphatase family AMIR_RS07585 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS07590 PF13834 AMIR_RS07590 AMIR_RS07595 PF11292 AMIR_RS07595 AMIR_RS07600 PF00692 dUTPase AMIR_RS07605 PF12502 AMIR_RS07605 AMIR_RS07620 PF11361 AMIR_RS07620 AMIR_RS07625 PF02080 TrkA-C domain AMIR_RS07625 PF02254 TrkA-N domain AMIR_RS07630 PF02080 TrkA-C domain AMIR_RS07630 PF02254 TrkA-N domain AMIR_RS07635 PF13520 Amino acid permease AMIR_RS07640 PF05958 tRNA (Uracil-5-)-methyltransferase AMIR_RS07645 PF02779 Transketolase, pyrimidine binding domain AMIR_RS07645 PF02780 Transketolase, C-terminal domain AMIR_RS07645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS07650 PF01145 SPFH domain / Band 7 family AMIR_RS07655 PF00072 Response regulator receiver domain AMIR_RS07655 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS07660 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS07660 PF00672 HAMP domain AMIR_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS07685 PF12643 AMIR_RS07685 AMIR_RS07690 PF14011 EspG family AMIR_RS07695 PF00823 PPE family AMIR_RS07700 PF12079 AMIR_RS07700 AMIR_RS07705 PF00934 PE family AMIR_RS07710 PF03995 Peptidase inhibitor family I36 AMIR_RS07725 PF01904 Protein of unknown function DUF72 AMIR_RS07730 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMIR_RS07735 PF01850 PIN domain AMIR_RS07745 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS07750 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS07750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS07750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS07755 PF00108 Thiolase, N-terminal domain AMIR_RS07755 PF02803 Thiolase, C-terminal domain AMIR_RS07760 PF14108 AMIR_RS07760 AMIR_RS07770 PF13411 MerR HTH family regulatory protein AMIR_RS07775 PF00570 HRDC domain AMIR_RS07775 PF01612 3'-5' exonuclease AMIR_RS07780 PF00072 Response regulator receiver domain AMIR_RS07780 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS07785 PF01244 Membrane dipeptidase (Peptidase family M19) AMIR_RS07790 PF11452 AMIR_RS07790 AMIR_RS07795 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMIR_RS07800 PF01593 Flavin containing amine oxidoreductase AMIR_RS07805 PF06778 Chlorite dismutase AMIR_RS07810 PF00082 Subtilase family AMIR_RS07830 PF05114 Protein of unknown function (DUF692) AMIR_RS07860 PF01641 SelR domain AMIR_RS07870 PF06089 AMIR_RS07870 AMIR_RS07875 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS07875 PF07729 FCD domain AMIR_RS07880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS07880 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS07880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS07885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS07885 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS07885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS07920 PF00561 alpha/beta hydrolase fold AMIR_RS07920 PF08386 TAP-like protein AMIR_RS07925 PF00892 EamA-like transporter family AMIR_RS07930 PF01068 ATP dependent DNA ligase domain AMIR_RS07930 PF04679 ATP dependent DNA ligase C terminal region AMIR_RS07935 PF01872 RibD C-terminal domain AMIR_RS07940 PF03969 AFG1-like ATPase AMIR_RS07945 PF11239 AMIR_RS07945 AMIR_RS07950 PF00005 ABC transporter AMIR_RS07950 PF12848 ABC transporter AMIR_RS07955 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS07960 PF10282 Lactonase, 7-bladed beta-propeller AMIR_RS07965 PF00202 Aminotransferase class-III AMIR_RS07970 PF10009 AMIR_RS07970 AMIR_RS07975 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS07985 PF11236 AMIR_RS07985 AMIR_RS07990 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS08010 PF01043 SecA preprotein cross-linking domain AMIR_RS08010 PF07516 SecA Wing and Scaffold domain AMIR_RS08010 PF07517 SecA DEAD-like domain AMIR_RS08015 PF14078 AMIR_RS08015 AMIR_RS08020 PF07070 AMIR_RS08020 AMIR_RS08025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS08025 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS08025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS08035 PF13519 von Willebrand factor type A domain AMIR_RS08035 PF13531 Bacterial extracellular solute-binding protein AMIR_RS08045 PF00929 Exonuclease AMIR_RS08050 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS08055 PF12079 AMIR_RS08055 AMIR_RS08065 PF01575 MaoC like domain AMIR_RS08070 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS08075 PF00106 short chain dehydrogenase AMIR_RS08080 PF00107 Zinc-binding dehydrogenase AMIR_RS08090 PF00082 Subtilase family AMIR_RS08095 PF00999 Sodium/hydrogen exchanger family AMIR_RS08100 PF02080 TrkA-C domain AMIR_RS08105 PF02224 Cytidylate kinase AMIR_RS08110 PF01553 Acyltransferase AMIR_RS08115 PF01926 50S ribosome-binding GTPase AMIR_RS08115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMIR_RS08120 PF00072 Response regulator receiver domain AMIR_RS08120 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS08125 PF07730 Histidine kinase AMIR_RS08135 PF00589 Phage integrase family AMIR_RS08135 PF13495 Phage integrase, N-terminal SAM-like domain AMIR_RS08170 PF13560 Helix-turn-helix domain AMIR_RS08175 PF04149 AMIR_RS08175 AMIR_RS08190 PF05709 Phage tail protein AMIR_RS08230 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS08285 PF06152 AMIR_RS08285 AMIR_RS08300 PF03237 Terminase-like family AMIR_RS08335 PF00293 NUDIX domain AMIR_RS08345 PF03707 AMIR_RS08345 AMIR_RS08350 PF00075 RNase H AMIR_RS08360 PF00801 PKD domain AMIR_RS08365 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS08365 PF16499 AMIR_RS08365 AMIR_RS08370 PF00931 NB-ARC domain AMIR_RS08380 PF14023 AMIR_RS08380 AMIR_RS08390 PF00005 ABC transporter AMIR_RS08395 PF00005 ABC transporter AMIR_RS08395 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIR_RS08400 PF02653 AMIR_RS08400 AMIR_RS08405 PF02653 AMIR_RS08405 AMIR_RS08410 PF13433 Periplasmic binding protein domain AMIR_RS08415 PF04235 AMIR_RS08415 AMIR_RS08425 PF00480 ROK family AMIR_RS08430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS08435 PF00005 ABC transporter AMIR_RS08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08445 PF12911 AMIR_RS08445 AMIR_RS08450 PF00005 ABC transporter AMIR_RS08450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS08455 PF00232 Glycosyl hydrolase family 1 AMIR_RS08465 PF13672 Protein phosphatase 2C AMIR_RS08480 PF03073 TspO/MBR family AMIR_RS08485 PF04978 Protein of unknown function (DUF664) AMIR_RS08490 PF05491 Holliday junction DNA helicase ruvB C-terminus AMIR_RS08490 PF05496 Holliday junction DNA helicase ruvB N-terminus AMIR_RS08495 PF01330 RuvA N terminal domain AMIR_RS08495 PF07499 RuvA, C-terminal domain AMIR_RS08495 PF14520 Helix-hairpin-helix domain AMIR_RS08500 PF02075 Crossover junction endodeoxyribonuclease RuvC AMIR_RS08505 PF00990 GGDEF domain AMIR_RS08510 PF02699 Preprotein translocase subunit AMIR_RS08515 PF02355 Protein export membrane protein AMIR_RS08520 PF02355 Protein export membrane protein AMIR_RS08520 PF07549 SecD/SecF GG Motif AMIR_RS08525 PF00156 Phosphoribosyl transferase domain AMIR_RS08530 PF02824 TGS domain AMIR_RS08530 PF04607 Region found in RelA / SpoT proteins AMIR_RS08530 PF13291 ACT domain AMIR_RS08530 PF13328 HD domain AMIR_RS08535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIR_RS08540 PF00753 Metallo-beta-lactamase superfamily AMIR_RS08545 PF03129 Anticodon binding domain AMIR_RS08545 PF13393 Histidyl-tRNA synthetase AMIR_RS08560 PF01564 Spermine/spermidine synthase AMIR_RS08565 PF06993 AMIR_RS08565 AMIR_RS08570 PF07907 AMIR_RS08570 AMIR_RS08585 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS08590 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS08595 PF07287 AMIR_RS08595 AMIR_RS08605 PF01039 Carboxyl transferase domain AMIR_RS08610 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMIR_RS08610 PF00364 Biotin-requiring enzyme AMIR_RS08610 PF02785 Biotin carboxylase C-terminal domain AMIR_RS08610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS08615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS08615 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS08615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS08625 PF00082 Subtilase family AMIR_RS08625 PF05922 Peptidase inhibitor I9 AMIR_RS08630 PF00082 Subtilase family AMIR_RS08630 PF05922 Peptidase inhibitor I9 AMIR_RS08635 PF00152 tRNA synthetases class II (D, K and N) AMIR_RS08635 PF01336 OB-fold nucleic acid binding domain AMIR_RS08635 PF02938 GAD domain AMIR_RS08645 PF00535 Glycosyl transferase family 2 AMIR_RS08645 PF04138 AMIR_RS08645 AMIR_RS08650 PF13231 AMIR_RS08650 AMIR_RS08655 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS08655 PF00672 HAMP domain AMIR_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS08660 PF00072 Response regulator receiver domain AMIR_RS08660 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS08670 PF04234 CopC domain AMIR_RS08675 PF03167 Uracil DNA glycosylase superfamily AMIR_RS08685 PF13275 S4 domain AMIR_RS08690 PF02397 AMIR_RS08690 AMIR_RS08690 PF13727 CoA-binding domain AMIR_RS08695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS08700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIR_RS08705 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS08710 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS08715 PF13205 Bacterial Ig-like domain AMIR_RS08715 PF13313 AMIR_RS08715 AMIR_RS08720 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS08725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS08730 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS08735 PF04932 AMIR_RS08735 AMIR_RS08750 PF01609 Transposase DDE domain AMIR_RS08750 PF13006 AMIR_RS08750 AMIR_RS08755 PF00106 short chain dehydrogenase AMIR_RS08755 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS08765 PF13440 AMIR_RS08765 AMIR_RS08770 PF00535 Glycosyl transferase family 2 AMIR_RS08775 PF11316 AMIR_RS08775 AMIR_RS08785 PF10282 Lactonase, 7-bladed beta-propeller AMIR_RS08790 PF07690 Major Facilitator Superfamily AMIR_RS08795 PF03808 AMIR_RS08795 AMIR_RS08800 PF00535 Glycosyl transferase family 2 AMIR_RS08800 PF13692 Glycosyl transferases group 1 AMIR_RS08805 PF00069 Protein kinase domain AMIR_RS08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS08810 PF00672 HAMP domain AMIR_RS08815 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS08820 PF00583 Acetyltransferase (GNAT) family AMIR_RS08825 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS08825 PF03795 YCII-related domain AMIR_RS08830 PF03061 Thioesterase superfamily AMIR_RS08835 PF10604 Polyketide cyclase / dehydrase and lipid transport AMIR_RS08840 PF13450 NAD(P)-binding Rossmann-like domain AMIR_RS08845 PF00575 S1 RNA binding domain AMIR_RS08845 PF09371 Tex-like protein N-terminal domain AMIR_RS08845 PF12836 Helix-hairpin-helix motif AMIR_RS08845 PF16921 AMIR_RS08845 AMIR_RS08850 PF00248 Aldo/keto reductase family AMIR_RS08860 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS08865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS08870 PF14019 AMIR_RS08870 AMIR_RS08880 PF03631 AMIR_RS08880 AMIR_RS08885 PF13699 AMIR_RS08885 AMIR_RS08890 PF00266 Aminotransferase class-V AMIR_RS08890 PF08348 AMIR_RS08890 AMIR_RS08890 PF13309 AMIR_RS08890 AMIR_RS08895 PF00005 ABC transporter AMIR_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08905 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS08910 PF00085 Thioredoxin AMIR_RS08915 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS08920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08930 PF02571 AMIR_RS08930 AMIR_RS08935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS08940 PF02570 Precorrin-8X methylmutase AMIR_RS08945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIR_RS08950 PF02514 AMIR_RS08950 AMIR_RS08955 PF13416 Bacterial extracellular solute-binding protein AMIR_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08965 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS08970 PF00232 Glycosyl hydrolase family 1 AMIR_RS08975 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS08975 PF13377 Periplasmic binding protein-like domain AMIR_RS08980 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMIR_RS08985 PF00553 Cellulose binding domain AMIR_RS08990 PF06305 AMIR_RS08990 AMIR_RS08995 PF00400 WD domain, G-beta repeat AMIR_RS09000 PF00480 ROK family AMIR_RS09005 PF01261 Xylose isomerase-like TIM barrel AMIR_RS09010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS09010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS09020 PF14907 Uncharacterised nucleotidyltransferase AMIR_RS09030 PF00149 Calcineurin-like phosphoesterase AMIR_RS09035 PF03364 Polyketide cyclase / dehydrase and lipid transport AMIR_RS09040 PF06445 GyrI-like small molecule binding domain AMIR_RS09040 PF12833 Helix-turn-helix domain AMIR_RS09045 PF00107 Zinc-binding dehydrogenase AMIR_RS09045 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS09045 PF13823 Alcohol dehydrogenase GroES-associated AMIR_RS09050 PF06150 ChaB AMIR_RS09050 PF07498 Rho termination factor, N-terminal domain AMIR_RS09055 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS09065 PF13416 Bacterial extracellular solute-binding protein AMIR_RS09075 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMIR_RS09075 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMIR_RS09075 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMIR_RS09080 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS09085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS09090 PF01022 Bacterial regulatory protein, arsR family AMIR_RS09110 PF02467 AMIR_RS09110 AMIR_RS09115 PF02310 B12 binding domain AMIR_RS09115 PF13411 MerR HTH family regulatory protein AMIR_RS09125 PF13466 STAS domain AMIR_RS09130 PF00877 NlpC/P60 family AMIR_RS09140 PF00041 Fibronectin type III domain AMIR_RS09140 PF00553 Cellulose binding domain AMIR_RS09140 PF03067 Chitin binding domain AMIR_RS09150 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09150 PF13377 Periplasmic binding protein-like domain AMIR_RS09155 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09155 PF13377 Periplasmic binding protein-like domain AMIR_RS09160 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS09160 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS09160 PF14310 Fibronectin type III-like domain AMIR_RS09170 PF05448 Acetyl xylan esterase (AXE1) AMIR_RS09180 PF00041 Fibronectin type III domain AMIR_RS09180 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS09180 PF00553 Cellulose binding domain AMIR_RS09185 PF00553 Cellulose binding domain AMIR_RS09185 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS09190 PF03795 YCII-related domain AMIR_RS09195 PF04542 Sigma-70 region 2 AMIR_RS09195 PF08281 Sigma-70, region 4 AMIR_RS09200 PF04149 AMIR_RS09200 AMIR_RS09205 PF13560 Helix-turn-helix domain AMIR_RS09210 PF16827 AMIR_RS09210 AMIR_RS09215 PF13560 Helix-turn-helix domain AMIR_RS09225 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS09230 PF00245 Alkaline phosphatase AMIR_RS09240 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09240 PF13377 Periplasmic binding protein-like domain AMIR_RS09245 PF00544 Pectate lyase AMIR_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09265 PF01547 Bacterial extracellular solute-binding protein AMIR_RS09270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS09270 PF13378 Enolase C-terminal domain-like AMIR_RS09275 PF00544 Pectate lyase AMIR_RS09280 PF02558 Ketopantoate reductase PanE/ApbA AMIR_RS09285 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS09285 PF02983 Alpha-lytic protease prodomain AMIR_RS09295 PF02653 AMIR_RS09295 AMIR_RS09300 PF02653 AMIR_RS09300 AMIR_RS09305 PF00005 ABC transporter AMIR_RS09310 PF13407 Periplasmic binding protein domain AMIR_RS09315 PF04616 Glycosyl hydrolases family 43 AMIR_RS09315 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS09320 PF02018 Carbohydrate binding domain AMIR_RS09320 PF06964 Alpha-L-arabinofuranosidase C-terminus AMIR_RS09325 PF04616 Glycosyl hydrolases family 43 AMIR_RS09325 PF05270 Alpha-L-arabinofuranosidase B (ABFB) AMIR_RS09330 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMIR_RS09330 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS09335 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09335 PF13377 Periplasmic binding protein-like domain AMIR_RS09340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS09340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS09345 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS09350 PF02610 L-arabinose isomerase AMIR_RS09350 PF11762 L-arabinose isomerase C-terminal domain AMIR_RS09355 PF13407 Periplasmic binding protein domain AMIR_RS09360 PF00005 ABC transporter AMIR_RS09365 PF02653 AMIR_RS09365 AMIR_RS09370 PF13529 Peptidase_C39 like family AMIR_RS09375 PF00553 Cellulose binding domain AMIR_RS09380 PF13229 Right handed beta helix region AMIR_RS09385 PF03992 Antibiotic biosynthesis monooxygenase AMIR_RS09390 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09390 PF13377 Periplasmic binding protein-like domain AMIR_RS09395 PF00703 Glycosyl hydrolases family 2 AMIR_RS09395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMIR_RS09395 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMIR_RS09395 PF05270 Alpha-L-arabinofuranosidase B (ABFB) AMIR_RS09400 PF07971 Glycosyl hydrolase family 92 AMIR_RS09400 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase AMIR_RS09415 PF04231 Endonuclease I AMIR_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09435 PF00072 Response regulator receiver domain AMIR_RS09435 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIR_RS09445 PF14572 Phosphoribosyl synthetase-associated domain AMIR_RS09450 PF04434 AMIR_RS09450 AMIR_RS09455 PF05762 VWA domain containing CoxE-like protein AMIR_RS09465 PF07728 AAA domain (dynein-related subfamily) AMIR_RS09470 PF13569 AMIR_RS09470 AMIR_RS09475 PF13569 AMIR_RS09475 AMIR_RS09480 PF13569 AMIR_RS09480 AMIR_RS09485 PF00534 Glycosyl transferases group 1 AMIR_RS09485 PF13439 Glycosyltransferase Family 4 AMIR_RS09495 PF14325 AMIR_RS09495 AMIR_RS09505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS09510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS09510 PF01381 Helix-turn-helix AMIR_RS09520 PF14430 AMIR_RS09520 AMIR_RS09525 PF00140 Sigma-70 factor, region 1 AMIR_RS09525 PF04539 Sigma-70 region 3 AMIR_RS09525 PF04542 Sigma-70 region 2 AMIR_RS09525 PF04545 Sigma-70, region 4 AMIR_RS09530 PF03976 Polyphosphate kinase 2 (PPK2) AMIR_RS09535 PF04226 AMIR_RS09535 AMIR_RS09550 PF00107 Zinc-binding dehydrogenase AMIR_RS09550 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS09555 PF00881 Nitroreductase family AMIR_RS09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09560 PF07730 Histidine kinase AMIR_RS09560 PF13185 GAF domain AMIR_RS09560 PF13492 GAF domain AMIR_RS09570 PF00072 Response regulator receiver domain AMIR_RS09570 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09575 PF00571 CBS domain AMIR_RS09580 PF00582 Universal stress protein family AMIR_RS09585 PF00583 Acetyltransferase (GNAT) family AMIR_RS09585 PF13380 CoA binding domain AMIR_RS09585 PF13549 ATP-grasp domain AMIR_RS09585 PF13607 Succinyl-CoA ligase like flavodoxin domain AMIR_RS09590 PF00582 Universal stress protein family AMIR_RS09600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMIR_RS09605 PF00881 Nitroreductase family AMIR_RS09610 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMIR_RS09610 PF09363 XFP C-terminal domain AMIR_RS09610 PF09364 XFP N-terminal domain AMIR_RS09615 PF00871 Acetokinase family AMIR_RS09620 PF00069 Protein kinase domain AMIR_RS09630 PF01757 AMIR_RS09630 AMIR_RS09635 PF00535 Glycosyl transferase family 2 AMIR_RS09640 PF13231 AMIR_RS09640 AMIR_RS09650 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09650 PF13377 Periplasmic binding protein-like domain AMIR_RS09655 PF01547 Bacterial extracellular solute-binding protein AMIR_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09670 PF06964 Alpha-L-arabinofuranosidase C-terminus AMIR_RS09675 PF13460 NADH(P)-binding AMIR_RS09685 PF00072 Response regulator receiver domain AMIR_RS09685 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS09690 PF00582 Universal stress protein family AMIR_RS09695 PF00582 Universal stress protein family AMIR_RS09705 PF00072 Response regulator receiver domain AMIR_RS09705 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09710 PF07730 Histidine kinase AMIR_RS09715 PF01061 AMIR_RS09715 AMIR_RS09720 PF00005 ABC transporter AMIR_RS09735 PF13560 Helix-turn-helix domain AMIR_RS09745 PF08241 Methyltransferase domain AMIR_RS09750 PF16321 AMIR_RS09750 AMIR_RS09755 PF00005 ABC transporter AMIR_RS09755 PF03459 TOBE domain AMIR_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09765 PF13531 Bacterial extracellular solute-binding protein AMIR_RS09770 PF03459 TOBE domain AMIR_RS09770 PF12728 Helix-turn-helix domain AMIR_RS09775 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09775 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS09780 PF07690 Major Facilitator Superfamily AMIR_RS09790 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS09790 PF00582 Universal stress protein family AMIR_RS09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS09790 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIR_RS09790 PF13493 Domain of unknown function (DUF4118) AMIR_RS09800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS09800 PF08447 PAS fold AMIR_RS09805 PF00106 short chain dehydrogenase AMIR_RS09810 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09815 PF06902 Divergent 4Fe-4S mono-cluster AMIR_RS09820 PF00067 Cytochrome P450 AMIR_RS09825 PF02146 Sir2 family AMIR_RS09845 PF01047 MarR family AMIR_RS09855 PF05977 Transmembrane secretion effector AMIR_RS09860 PF03403 Platelet-activating factor acetylhydrolase, isoform II AMIR_RS09865 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS09865 PF13245 Part of AAA domain AMIR_RS09870 PF05270 Alpha-L-arabinofuranosidase B (ABFB) AMIR_RS09875 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09880 PF03435 Saccharopine dehydrogenase AMIR_RS09885 PF08241 Methyltransferase domain AMIR_RS09890 PF07477 Glycosyl hydrolase family 67 C-terminus AMIR_RS09890 PF07488 Glycosyl hydrolase family 67 middle domain AMIR_RS09895 PF02449 Beta-galactosidase AMIR_RS09895 PF08532 Beta-galactosidase trimerisation domain AMIR_RS09895 PF08533 Beta-galactosidase C-terminal domain AMIR_RS09900 PF04854 AMIR_RS09900 AMIR_RS09905 PF01229 Glycosyl hydrolases family 39 AMIR_RS09910 PF13416 Bacterial extracellular solute-binding protein AMIR_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS09925 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS09925 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS09925 PF14310 Fibronectin type III-like domain AMIR_RS09930 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS09930 PF13377 Periplasmic binding protein-like domain AMIR_RS09935 PF05448 Acetyl xylan esterase (AXE1) AMIR_RS09940 PF02861 Clp amino terminal domain AMIR_RS09945 PF09969 AMIR_RS09945 AMIR_RS09955 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS09965 PF01636 Phosphotransferase enzyme family AMIR_RS09970 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS09975 PF12277 AMIR_RS09975 AMIR_RS09980 PF07332 AMIR_RS09980 AMIR_RS09985 PF03631 AMIR_RS09985 AMIR_RS09990 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS09995 PF00202 Aminotransferase class-III AMIR_RS10000 PF00982 Glycosyltransferase family 20 AMIR_RS10005 PF04321 RmlD substrate binding domain AMIR_RS10010 PF07690 Major Facilitator Superfamily AMIR_RS10015 PF01761 3-dehydroquinate synthase AMIR_RS10020 PF01261 Xylose isomerase-like TIM barrel AMIR_RS10020 PF07582 AP endonuclease family 2 C terminus AMIR_RS10025 PF00483 Nucleotidyl transferase AMIR_RS10030 PF06983 3-demethylubiquinone-9 3-methyltransferase AMIR_RS10035 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10040 PF01274 Malate synthase AMIR_RS10045 PF00463 Isocitrate lyase family AMIR_RS10050 PF06114 Domain of unknown function (DUF955) AMIR_RS10050 PF09856 AMIR_RS10050 AMIR_RS10050 PF13560 Helix-turn-helix domain AMIR_RS10060 PF07730 Histidine kinase AMIR_RS10065 PF00072 Response regulator receiver domain AMIR_RS10065 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS10075 PF00082 Subtilase family AMIR_RS10075 PF05922 Peptidase inhibitor I9 AMIR_RS10080 PF01494 FAD binding domain AMIR_RS10105 PF04686 Streptomyces sporulation and cell division protein, SsgA AMIR_RS10110 PF04542 Sigma-70 region 2 AMIR_RS10110 PF08281 Sigma-70, region 4 AMIR_RS10115 PF10099 AMIR_RS10115 AMIR_RS10120 PF09656 AMIR_RS10120 AMIR_RS10130 PF00589 Phage integrase family AMIR_RS10135 PF09299 Mu transposase, C-terminal AMIR_RS10145 PF00202 Aminotransferase class-III AMIR_RS10155 PF03301 Tryptophan 2,3-dioxygenase AMIR_RS10160 PF00266 Aminotransferase class-V AMIR_RS10165 PF02222 ATP-grasp domain AMIR_RS10170 PF05977 Transmembrane secretion effector AMIR_RS10175 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS10180 PF00324 Amino acid permease AMIR_RS10190 PF00005 ABC transporter AMIR_RS10195 PF00717 Peptidase S24-like AMIR_RS10205 PF03741 AMIR_RS10205 AMIR_RS10215 PF01494 FAD binding domain AMIR_RS10220 PF02665 Nitrate reductase gamma subunit AMIR_RS10225 PF02613 Nitrate reductase delta subunit AMIR_RS10230 PF13247 4Fe-4S dicluster domain AMIR_RS10230 PF14711 Respiratory nitrate reductase beta C-terminal AMIR_RS10235 PF00384 Molybdopterin oxidoreductase AMIR_RS10235 PF01568 Molydopterin dinucleotide binding domain AMIR_RS10240 PF07690 Major Facilitator Superfamily AMIR_RS10265 PF00764 Arginosuccinate synthase AMIR_RS10270 PF05592 Bacterial alpha-L-rhamnosidase AMIR_RS10270 PF08531 Alpha-L-rhamnosidase N-terminal domain AMIR_RS10275 PF00553 Cellulose binding domain AMIR_RS10280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMIR_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10290 PF00005 ABC transporter AMIR_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10310 PF13343 Bacterial extracellular solute-binding protein AMIR_RS10320 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10325 PF00005 ABC transporter AMIR_RS10325 PF08402 TOBE domain AMIR_RS10330 PF08309 AMIR_RS10330 AMIR_RS10335 PF03713 Domain of unknown function (DUF305) AMIR_RS10345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS10350 PF00576 HIUase/Transthyretin family AMIR_RS10355 PF07905 AMIR_RS10355 AMIR_RS10355 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS10365 PF08376 Nitrate and nitrite sensing AMIR_RS10370 PF03259 Roadblock/LC7 domain AMIR_RS10375 PF05331 AMIR_RS10375 AMIR_RS10380 PF03029 Conserved hypothetical ATP binding protein AMIR_RS10385 PF00743 Flavin-binding monooxygenase-like AMIR_RS10390 PF11991 Tryptophan dimethylallyltransferase AMIR_RS10395 PF04229 GrpB protein AMIR_RS10400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS10400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS10405 PF00188 Cysteine-rich secretory protein family AMIR_RS10410 PF13520 Amino acid permease AMIR_RS10415 PF00120 Glutamine synthetase, catalytic domain AMIR_RS10420 PF07722 Peptidase C26 AMIR_RS10425 PF00171 Aldehyde dehydrogenase family AMIR_RS10430 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS10435 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS10435 PF07729 FCD domain AMIR_RS10445 PF01402 Ribbon-helix-helix protein, copG family AMIR_RS10450 PF13349 AMIR_RS10450 AMIR_RS10455 PF00005 ABC transporter AMIR_RS10460 PF01061 AMIR_RS10460 AMIR_RS10475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS10475 PF03129 Anticodon binding domain AMIR_RS10475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS10480 PF01230 HIT domain AMIR_RS10490 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS10495 PF03279 AMIR_RS10495 AMIR_RS10500 PF13439 Glycosyltransferase Family 4 AMIR_RS10500 PF13692 Glycosyl transferases group 1 AMIR_RS10505 PF00293 NUDIX domain AMIR_RS10510 PF08000 Bacterial PH domain AMIR_RS10515 PF14024 AMIR_RS10515 AMIR_RS10520 PF00296 Luciferase-like monooxygenase AMIR_RS10525 PF01979 Amidohydrolase family AMIR_RS10530 PF00795 Carbon-nitrogen hydrolase AMIR_RS10535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AMIR_RS10545 PF07905 AMIR_RS10545 AMIR_RS10545 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS10550 PF00202 Aminotransferase class-III AMIR_RS10555 PF00171 Aldehyde dehydrogenase family AMIR_RS10565 PF00009 Elongation factor Tu GTP binding domain AMIR_RS10565 PF00679 Elongation factor G C-terminus AMIR_RS10565 PF03144 Elongation factor Tu domain 2 AMIR_RS10565 PF03764 Elongation factor G, domain IV AMIR_RS10565 PF14492 Elongation Factor G, domain II AMIR_RS10570 PF01680 SOR/SNZ family AMIR_RS10575 PF01174 SNO glutamine amidotransferase family AMIR_RS10580 PF01709 Transcriptional regulator AMIR_RS10585 PF14081 AMIR_RS10585 AMIR_RS10590 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS10595 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10600 PF07690 Major Facilitator Superfamily AMIR_RS10605 PF00067 Cytochrome P450 AMIR_RS10610 PF00067 Cytochrome P450 AMIR_RS10615 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10625 PF07690 Major Facilitator Superfamily AMIR_RS10630 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS10645 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS10650 PF03781 Sulfatase-modifying factor enzyme 1 AMIR_RS10650 PF12867 DinB superfamily AMIR_RS10655 PF13522 Glutamine amidotransferase domain AMIR_RS10660 PF10017 AMIR_RS10660 AMIR_RS10670 PF13560 Helix-turn-helix domain AMIR_RS10675 PF04149 AMIR_RS10675 AMIR_RS10690 PF01471 Putative peptidoglycan binding domain AMIR_RS10695 PF00330 Aconitase family (aconitate hydratase) AMIR_RS10695 PF00694 Aconitase C-terminal domain AMIR_RS10700 PF00005 ABC transporter AMIR_RS10720 PF02146 Sir2 family AMIR_RS10725 PF00194 Eukaryotic-type carbonic anhydrase AMIR_RS10730 PF00501 AMP-binding enzyme AMIR_RS10730 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS10735 PF00877 NlpC/P60 family AMIR_RS10740 PF04542 Sigma-70 region 2 AMIR_RS10740 PF08281 Sigma-70, region 4 AMIR_RS10750 PF12804 MobA-like NTP transferase domain AMIR_RS10755 PF05724 Thiopurine S-methyltransferase (TPMT) AMIR_RS10760 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS10765 PF01882 AMIR_RS10765 AMIR_RS10770 PF00092 von Willebrand factor type A domain AMIR_RS10780 PF16868 AMIR_RS10780 AMIR_RS10785 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS10785 PF00672 HAMP domain AMIR_RS10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS10790 PF00072 Response regulator receiver domain AMIR_RS10790 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS10795 PF03861 ANTAR domain AMIR_RS10795 PF13185 GAF domain AMIR_RS10800 PF02575 YbaB/EbfC DNA-binding family AMIR_RS10820 PF02470 AMIR_RS10820 AMIR_RS10820 PF11887 AMIR_RS10820 AMIR_RS10825 PF02470 AMIR_RS10825 AMIR_RS10830 PF02470 AMIR_RS10830 AMIR_RS10835 PF02470 AMIR_RS10835 AMIR_RS10840 PF02470 AMIR_RS10840 AMIR_RS10840 PF11887 AMIR_RS10840 AMIR_RS10845 PF02470 AMIR_RS10845 AMIR_RS10855 PF01636 Phosphotransferase enzyme family AMIR_RS10860 PF02810 SEC-C motif AMIR_RS10865 PF00553 Cellulose binding domain AMIR_RS10865 PF01341 Glycosyl hydrolases family 6 AMIR_RS10870 PF00553 Cellulose binding domain AMIR_RS10870 PF02011 Glycosyl hydrolase family 48 AMIR_RS10875 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS10875 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS10875 PF14310 Fibronectin type III-like domain AMIR_RS10880 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS10880 PF13377 Periplasmic binding protein-like domain AMIR_RS10885 PF13416 Bacterial extracellular solute-binding protein AMIR_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS10900 PF02449 Beta-galactosidase AMIR_RS10900 PF08532 Beta-galactosidase trimerisation domain AMIR_RS10900 PF08533 Beta-galactosidase C-terminal domain AMIR_RS10905 PF14498 Glycosyl hydrolase family 65, N-terminal domain AMIR_RS10910 PF03091 CutA1 divalent ion tolerance protein AMIR_RS10915 PF13411 MerR HTH family regulatory protein AMIR_RS10925 PF13354 Beta-lactamase enzyme family AMIR_RS10930 PF01565 FAD binding domain AMIR_RS10930 PF02754 AMIR_RS10930 AMIR_RS10930 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS10930 PF13183 4Fe-4S dicluster domain AMIR_RS10935 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS10940 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS10945 PF00762 Ferrochelatase AMIR_RS10950 PF14317 AMIR_RS10950 AMIR_RS10960 PF00106 short chain dehydrogenase AMIR_RS10965 PF12079 AMIR_RS10965 AMIR_RS10975 PF12079 AMIR_RS10975 AMIR_RS10980 PF00823 PPE family AMIR_RS10985 PF14011 EspG family AMIR_RS10990 PF00553 Cellulose binding domain AMIR_RS10990 PF01341 Glycosyl hydrolases family 6 AMIR_RS10995 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS11005 PF04542 Sigma-70 region 2 AMIR_RS11010 PF00293 NUDIX domain AMIR_RS11015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS11015 PF00672 HAMP domain AMIR_RS11015 PF05227 CHASE3 domain AMIR_RS11020 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS11035 PF01406 tRNA synthetases class I (C) catalytic domain AMIR_RS11040 PF00082 Subtilase family AMIR_RS11040 PF01483 Proprotein convertase P-domain AMIR_RS11040 PF05922 Peptidase inhibitor I9 AMIR_RS11045 PF12802 MarR family AMIR_RS11050 PF12389 AMIR_RS11050 AMIR_RS11060 PF00717 Peptidase S24-like AMIR_RS11065 PF00072 Response regulator receiver domain AMIR_RS11065 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS11070 PF00072 Response regulator receiver domain AMIR_RS11075 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11075 PF01590 GAF domain AMIR_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11080 PF09754 PAC2 family AMIR_RS11085 PF00809 Pterin binding enzyme AMIR_RS11085 PF02310 B12 binding domain AMIR_RS11085 PF02574 Homocysteine S-methyltransferase AMIR_RS11085 PF02607 B12 binding domain AMIR_RS11085 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMIR_RS11090 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS11095 PF06276 Ferric iron reductase FhuF-like transporter AMIR_RS11095 PF11575 AMIR_RS11095 AMIR_RS11100 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS11100 PF13305 WHG domain AMIR_RS11105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS11110 PF00106 short chain dehydrogenase AMIR_RS11120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMIR_RS11125 PF03547 AMIR_RS11125 AMIR_RS11130 PF00544 Pectate lyase AMIR_RS11135 PF13622 Thioesterase-like superfamily AMIR_RS11140 PF12705 PD-(D/E)XK nuclease superfamily AMIR_RS11145 PF02163 Peptidase family M50 AMIR_RS11155 PF00072 Response regulator receiver domain AMIR_RS11155 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11160 PF07730 Histidine kinase AMIR_RS11170 PF08704 tRNA methyltransferase complex GCD14 subunit AMIR_RS11170 PF14801 tRNA methyltransferase complex GCD14 subunit N-term AMIR_RS11185 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS11185 PF16450 AMIR_RS11185 AMIR_RS11190 PF00072 Response regulator receiver domain AMIR_RS11190 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11195 PF07730 Histidine kinase AMIR_RS11200 PF00005 ABC transporter AMIR_RS11205 PF12730 AMIR_RS11205 AMIR_RS11210 PF00248 Aldo/keto reductase family AMIR_RS11215 PF00293 NUDIX domain AMIR_RS11220 PF02687 AMIR_RS11220 AMIR_RS11225 PF03136 Pup-ligase protein AMIR_RS11230 PF05639 Pup-like protein AMIR_RS11235 PF00227 Proteasome subunit AMIR_RS11240 PF00227 Proteasome subunit AMIR_RS11245 PF00106 short chain dehydrogenase AMIR_RS11250 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS11255 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS11255 PF13191 AAA ATPase domain AMIR_RS11260 PF00781 Diacylglycerol kinase catalytic domain AMIR_RS11260 PF01569 PAP2 superfamily AMIR_RS11265 PF03136 Pup-ligase protein AMIR_RS11270 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS11275 PF13280 AMIR_RS11275 AMIR_RS11280 PF13280 AMIR_RS11280 AMIR_RS11290 PF02416 mttA/Hcf106 family AMIR_RS11295 PF00902 Sec-independent protein translocase protein (TatC) AMIR_RS11300 PF00781 Diacylglycerol kinase catalytic domain AMIR_RS11305 PF00270 DEAD/DEAH box helicase AMIR_RS11305 PF00271 Helicase conserved C-terminal domain AMIR_RS11305 PF08148 DSHCT (NUC185) domain AMIR_RS11310 PF14230 AMIR_RS11310 AMIR_RS11315 PF13527 Acetyltransferase (GNAT) domain AMIR_RS11315 PF13530 Sterol carrier protein domain AMIR_RS11320 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIR_RS11320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIR_RS11325 PF00557 Metallopeptidase family M24 AMIR_RS11325 PF01321 Creatinase/Prolidase N-terminal domain AMIR_RS11330 PF01037 AsnC family AMIR_RS11330 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS11335 PF01063 Aminotransferase class IV AMIR_RS11345 PF00990 GGDEF domain AMIR_RS11355 PF03576 Peptidase family S58 AMIR_RS11360 PF10592 AMIR_RS11360 AMIR_RS11365 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIR_RS11370 PF00270 DEAD/DEAH box helicase AMIR_RS11370 PF00271 Helicase conserved C-terminal domain AMIR_RS11370 PF03880 DbpA RNA binding domain AMIR_RS11375 PF04607 Region found in RelA / SpoT proteins AMIR_RS11380 PF00892 EamA-like transporter family AMIR_RS11390 PF04264 YceI-like domain AMIR_RS11395 PF12802 MarR family AMIR_RS11400 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS11405 PF01882 AMIR_RS11405 AMIR_RS11410 PF00501 AMP-binding enzyme AMIR_RS11410 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS11420 PF01642 Methylmalonyl-CoA mutase AMIR_RS11420 PF02310 B12 binding domain AMIR_RS11420 PF03308 ArgK protein AMIR_RS11435 PF00204 DNA gyrase B AMIR_RS11435 PF00986 DNA gyrase B subunit, carboxyl terminus AMIR_RS11435 PF01751 Toprim domain AMIR_RS11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11440 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIR_RS11440 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIR_RS11450 PF14124 AMIR_RS11450 AMIR_RS11455 PF00296 Luciferase-like monooxygenase AMIR_RS11460 PF03358 NADPH-dependent FMN reductase AMIR_RS11465 PF01634 ATP phosphoribosyltransferase AMIR_RS11465 PF08029 HisG, C-terminal domain AMIR_RS11475 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS11485 PF12822 Protein of unknown function (DUF3816) AMIR_RS11490 PF00005 ABC transporter AMIR_RS11495 PF02361 Cobalt transport protein AMIR_RS11510 PF13649 Methyltransferase domain AMIR_RS11520 PF00480 ROK family AMIR_RS11525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS11525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS11530 PF01261 Xylose isomerase-like TIM barrel AMIR_RS11530 PF07582 AP endonuclease family 2 C terminus AMIR_RS11535 PF01565 FAD binding domain AMIR_RS11535 PF04030 D-arabinono-1,4-lactone oxidase AMIR_RS11540 PF05977 Transmembrane secretion effector AMIR_RS11555 PF13466 STAS domain AMIR_RS11560 PF05175 Methyltransferase small domain AMIR_RS11565 PF09360 Iron-binding zinc finger CDGSH type AMIR_RS11570 PF14518 Iron-containing redox enzyme AMIR_RS11575 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS11580 PF00296 Luciferase-like monooxygenase AMIR_RS11600 PF00771 FHIPEP family AMIR_RS11610 PF00072 Response regulator receiver domain AMIR_RS11615 PF13690 Chemotaxis phosphatase CheX AMIR_RS11620 PF00072 Response regulator receiver domain AMIR_RS11625 PF01739 CheR methyltransferase, SAM binding domain AMIR_RS11625 PF03705 CheR methyltransferase, all-alpha domain AMIR_RS11630 PF00072 Response regulator receiver domain AMIR_RS11630 PF01339 CheB methylesterase AMIR_RS11640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS11640 PF00672 HAMP domain AMIR_RS11640 PF12729 AMIR_RS11640 AMIR_RS11645 PF01584 CheW-like domain AMIR_RS11650 PF01584 CheW-like domain AMIR_RS11650 PF01627 Hpt domain AMIR_RS11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11650 PF02895 Signal transducing histidine kinase, homodimeric domain AMIR_RS11665 PF01312 FlhB HrpN YscU SpaS Family AMIR_RS11670 PF01311 AMIR_RS11670 AMIR_RS11675 PF01313 AMIR_RS11675 AMIR_RS11680 PF00813 AMIR_RS11680 AMIR_RS11690 PF01052 Surface presentation of antigens (SPOA) AMIR_RS11695 PF01052 Surface presentation of antigens (SPOA) AMIR_RS11695 PF02154 Flagellar motor switch protein FliM AMIR_RS11700 PF03748 AMIR_RS11700 AMIR_RS11705 PF00691 OmpA family AMIR_RS11705 PF13677 AMIR_RS11705 AMIR_RS11710 PF01618 AMIR_RS11710 AMIR_RS11715 PF06289 AMIR_RS11715 AMIR_RS11720 PF00460 Flagella basal body rod protein AMIR_RS11720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11725 PF03963 AMIR_RS11725 AMIR_RS11730 PF02120 Flagellar hook-length control protein FliK AMIR_RS11735 PF00877 NlpC/P60 family AMIR_RS11735 PF01464 Transglycosylase SLT domain AMIR_RS11745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS11745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS11750 PF02108 AMIR_RS11750 AMIR_RS11755 PF01706 FliG C-terminal domain AMIR_RS11755 PF14841 FliG middle domain AMIR_RS11755 PF14842 FliG N-terminal domain AMIR_RS11760 PF01514 Secretory protein of YscJ/FliF family AMIR_RS11760 PF08345 AMIR_RS11760 AMIR_RS11765 PF02049 AMIR_RS11765 AMIR_RS11770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11775 PF00460 Flagella basal body rod protein AMIR_RS11785 PF02561 Flagellar protein FliS AMIR_RS11790 PF02465 AMIR_RS11790 AMIR_RS11790 PF07195 AMIR_RS11790 AMIR_RS11795 PF00669 Bacterial flagellin N-terminal helical region AMIR_RS11795 PF00700 Bacterial flagellin C-terminal helical region AMIR_RS11800 PF04539 Sigma-70 region 3 AMIR_RS11800 PF04542 Sigma-70 region 2 AMIR_RS11800 PF04545 Sigma-70, region 4 AMIR_RS11805 PF05130 FlgN protein AMIR_RS11810 PF00460 Flagella basal body rod protein AMIR_RS11810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIR_RS11815 PF00669 Bacterial flagellin N-terminal helical region AMIR_RS11815 PF00700 Bacterial flagellin C-terminal helical region AMIR_RS11820 PF02623 FliW protein AMIR_RS11825 PF02599 Global regulator protein family AMIR_RS11830 PF00082 Subtilase family AMIR_RS11830 PF01483 Proprotein convertase P-domain AMIR_RS11835 PF00072 Response regulator receiver domain AMIR_RS11835 PF00989 PAS fold AMIR_RS11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11840 PF00072 Response regulator receiver domain AMIR_RS11845 PF05368 NmrA-like family AMIR_RS11850 PF12802 MarR family AMIR_RS11855 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11855 PF00989 PAS fold AMIR_RS11855 PF08448 PAS fold AMIR_RS11865 PF00072 Response regulator receiver domain AMIR_RS11865 PF08668 HDOD domain AMIR_RS11875 PF00072 Response regulator receiver domain AMIR_RS11875 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11875 PF00989 PAS fold AMIR_RS11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11875 PF02743 Cache domain AMIR_RS11880 PF00072 Response regulator receiver domain AMIR_RS11885 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS11885 PF07729 FCD domain AMIR_RS11900 PF13564 AMIR_RS11900 AMIR_RS11905 PF12802 MarR family AMIR_RS11910 PF13560 Helix-turn-helix domain AMIR_RS11915 PF00106 short chain dehydrogenase AMIR_RS11925 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS11925 PF05231 AMIR_RS11925 AMIR_RS11925 PF13188 PAS domain AMIR_RS11930 PF05437 AMIR_RS11930 AMIR_RS11935 PF03591 AMIR_RS11935 AMIR_RS11940 PF01037 AsnC family AMIR_RS11940 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS11945 PF05977 Transmembrane secretion effector AMIR_RS11950 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS11950 PF16859 AMIR_RS11950 AMIR_RS11955 PF02031 Streptomyces extracellular neutral proteinase (M7) family AMIR_RS11960 PF05025 RbsD / FucU transport protein family AMIR_RS11970 PF13560 Helix-turn-helix domain AMIR_RS11975 PF00106 short chain dehydrogenase AMIR_RS11985 PF00183 Hsp90 protein AMIR_RS11985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS12000 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS12010 PF00296 Luciferase-like monooxygenase AMIR_RS12015 PF01479 S4 domain AMIR_RS12025 PF00296 Luciferase-like monooxygenase AMIR_RS12030 PF04954 Siderophore-interacting protein AMIR_RS12030 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS12040 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS12040 PF13377 Periplasmic binding protein-like domain AMIR_RS12045 PF01547 Bacterial extracellular solute-binding protein AMIR_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12065 PF00005 ABC transporter AMIR_RS12070 PF00072 Response regulator receiver domain AMIR_RS12070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS12075 PF07730 Histidine kinase AMIR_RS12100 PF00582 Universal stress protein family AMIR_RS12105 PF04055 Radical SAM superfamily AMIR_RS12105 PF13353 4Fe-4S single cluster domain AMIR_RS12110 PF01228 Glycine radical AMIR_RS12110 PF02901 Pyruvate formate lyase AMIR_RS12125 PF01345 AMIR_RS12125 AMIR_RS12125 PF05738 Cna protein B-type domain AMIR_RS12125 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS12130 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12135 PF00106 short chain dehydrogenase AMIR_RS12145 PF00890 FAD binding domain AMIR_RS12145 PF05199 GMC oxidoreductase AMIR_RS12150 PF00520 Ion transport protein AMIR_RS12155 PF00561 alpha/beta hydrolase fold AMIR_RS12160 PF01565 FAD binding domain AMIR_RS12160 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS12165 PF04149 AMIR_RS12165 AMIR_RS12170 PF13560 Helix-turn-helix domain AMIR_RS12185 PF03537 Glycoside-hydrolase family GH114 AMIR_RS12190 PF00455 AMIR_RS12190 AMIR_RS12190 PF08220 DeoR-like helix-turn-helix domain AMIR_RS12195 PF00999 Sodium/hydrogen exchanger family AMIR_RS12200 PF11774 Lsr2 AMIR_RS12200 PF13514 AAA domain AMIR_RS12205 PF12850 Calcineurin-like phosphoesterase superfamily domain AMIR_RS12210 PF10544 AMIR_RS12210 AMIR_RS12210 PF13250 AMIR_RS12210 AMIR_RS12215 PF10708 AMIR_RS12215 AMIR_RS12220 PF13560 Helix-turn-helix domain AMIR_RS12225 PF04954 Siderophore-interacting protein AMIR_RS12225 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS12230 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12235 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS12235 PF13602 Zinc-binding dehydrogenase AMIR_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS12245 PF03466 LysR substrate binding domain AMIR_RS12250 PF00892 EamA-like transporter family AMIR_RS12255 PF01169 AMIR_RS12255 AMIR_RS12280 PF07561 AMIR_RS12280 AMIR_RS12285 PF12802 MarR family AMIR_RS12290 PF00005 ABC transporter AMIR_RS12290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS12295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS12300 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12305 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12310 PF01638 HxlR-like helix-turn-helix AMIR_RS12315 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS12315 PF13602 Zinc-binding dehydrogenase AMIR_RS12330 PF00072 Response regulator receiver domain AMIR_RS12330 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS12335 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS12335 PF13188 PAS domain AMIR_RS12340 PF01740 STAS domain AMIR_RS12345 PF00703 Glycosyl hydrolases family 2 AMIR_RS12345 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMIR_RS12345 PF07691 PA14 domain AMIR_RS12345 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS12350 PF07690 Major Facilitator Superfamily AMIR_RS12355 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS12355 PF07729 FCD domain AMIR_RS12360 PF14016 AMIR_RS12360 AMIR_RS12370 PF01740 STAS domain AMIR_RS12375 PF01546 Peptidase family M20/M25/M40 AMIR_RS12375 PF07687 Peptidase dimerisation domain AMIR_RS12380 PF13581 Histidine kinase-like ATPase domain AMIR_RS12385 PF03067 Chitin binding domain AMIR_RS12390 PF03741 AMIR_RS12390 AMIR_RS12395 PF00857 Isochorismatase family AMIR_RS12400 PF01471 Putative peptidoglycan binding domain AMIR_RS12400 PF13560 Helix-turn-helix domain AMIR_RS12415 PF01345 AMIR_RS12415 AMIR_RS12430 PF00092 von Willebrand factor type A domain AMIR_RS12430 PF13531 Bacterial extracellular solute-binding protein AMIR_RS12445 PF00069 Protein kinase domain AMIR_RS12470 PF00501 AMP-binding enzyme AMIR_RS12470 PF00550 Phosphopantetheine attachment site AMIR_RS12475 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS12475 PF00550 Phosphopantetheine attachment site AMIR_RS12475 PF00698 Acyl transferase domain AMIR_RS12475 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS12475 PF03060 Nitronate monooxygenase AMIR_RS12475 PF08659 KR domain AMIR_RS12475 PF16197 AMIR_RS12475 AMIR_RS12480 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS12480 PF00698 Acyl transferase domain AMIR_RS12480 PF01648 4'-phosphopantetheinyl transferase superfamily AMIR_RS12480 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS12480 PF14765 Polyketide synthase dehydratase AMIR_RS12480 PF16197 AMIR_RS12480 AMIR_RS12485 PF00550 Phosphopantetheine attachment site AMIR_RS12490 PF00561 alpha/beta hydrolase fold AMIR_RS12495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS12500 PF00005 ABC transporter AMIR_RS12500 PF00664 ABC transporter transmembrane region AMIR_RS12505 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS12510 PF01510 N-acetylmuramoyl-L-alanine amidase AMIR_RS12515 PF07452 AMIR_RS12515 AMIR_RS12525 PF03795 YCII-related domain AMIR_RS12530 PF04542 Sigma-70 region 2 AMIR_RS12530 PF08281 Sigma-70, region 4 AMIR_RS12535 PF00413 Matrixin AMIR_RS12540 PF00171 Aldehyde dehydrogenase family AMIR_RS12545 PF13569 AMIR_RS12545 AMIR_RS12570 PF07728 AAA domain (dynein-related subfamily) AMIR_RS12575 PF05762 VWA domain containing CoxE-like protein AMIR_RS12590 PF12833 Helix-turn-helix domain AMIR_RS12590 PF12852 Cupin AMIR_RS12595 PF07681 AMIR_RS12595 AMIR_RS12600 PF00199 Catalase AMIR_RS12600 PF06628 Catalase-related immune-responsive AMIR_RS12605 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AMIR_RS12610 PF02567 Phenazine biosynthesis-like protein AMIR_RS12615 PF13640 2OG-Fe(II) oxygenase superfamily AMIR_RS12625 PF13424 Tetratricopeptide repeat AMIR_RS12625 PF14559 Tetratricopeptide repeat AMIR_RS12630 PF07690 Major Facilitator Superfamily AMIR_RS12635 PF01047 MarR family AMIR_RS12640 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12645 PF00775 Dioxygenase AMIR_RS12650 PF06445 GyrI-like small molecule binding domain AMIR_RS12650 PF13411 MerR HTH family regulatory protein AMIR_RS12655 PF00149 Calcineurin-like phosphoesterase AMIR_RS12655 PF09992 Predicted periplasmic protein (DUF2233) AMIR_RS12660 PF13365 Trypsin-like peptidase domain AMIR_RS12665 PF00069 Protein kinase domain AMIR_RS12665 PF16918 AMIR_RS12665 AMIR_RS12665 PF16919 AMIR_RS12665 AMIR_RS12670 PF13768 von Willebrand factor type A domain AMIR_RS12680 PF01547 Bacterial extracellular solute-binding protein AMIR_RS12685 PF00067 Cytochrome P450 AMIR_RS12690 PF00106 short chain dehydrogenase AMIR_RS12695 PF07690 Major Facilitator Superfamily AMIR_RS12700 PF01047 MarR family AMIR_RS12705 PF00270 DEAD/DEAH box helicase AMIR_RS12705 PF00271 Helicase conserved C-terminal domain AMIR_RS12710 PF09391 Protein of unknown function (DUF2000) AMIR_RS12715 PF01037 AsnC family AMIR_RS12715 PF13404 AsnC-type helix-turn-helix domain AMIR_RS12745 PF00873 AcrB/AcrD/AcrF family AMIR_RS12750 PF00881 Nitroreductase family AMIR_RS12760 PF07690 Major Facilitator Superfamily AMIR_RS12765 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS12770 PF02628 AMIR_RS12770 AMIR_RS12790 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12795 PF00106 short chain dehydrogenase AMIR_RS12800 PF11350 AMIR_RS12800 AMIR_RS12805 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS12805 PF14587 O-Glycosyl hydrolase family 30 AMIR_RS12810 PF13208 AMIR_RS12810 AMIR_RS12810 PF15615 AMIR_RS12810 AMIR_RS12815 PF10923 AMIR_RS12815 AMIR_RS12820 PF03211 Pectate lyase AMIR_RS12825 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMIR_RS12830 PF01168 Alanine racemase, N-terminal domain AMIR_RS12830 PF14031 Putative serine dehydratase domain AMIR_RS12835 PF08348 AMIR_RS12835 AMIR_RS12835 PF13309 AMIR_RS12835 AMIR_RS12845 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS12845 PF05401 Nodulation protein S (NodS) AMIR_RS12850 PF13641 Glycosyltransferase like family 2 AMIR_RS12855 PF13302 Acetyltransferase (GNAT) domain AMIR_RS12860 PF03211 Pectate lyase AMIR_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS12875 PF01547 Bacterial extracellular solute-binding protein AMIR_RS12880 PF06964 Alpha-L-arabinofuranosidase C-terminus AMIR_RS12885 PF01301 Glycosyl hydrolases family 35 AMIR_RS12890 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS12890 PF13377 Periplasmic binding protein-like domain AMIR_RS12900 PF04542 Sigma-70 region 2 AMIR_RS12900 PF08281 Sigma-70, region 4 AMIR_RS12935 PF00331 Glycosyl hydrolase family 10 AMIR_RS12935 PF00553 Cellulose binding domain AMIR_RS12940 PF03929 AMIR_RS12940 AMIR_RS12945 PF17197 AMIR_RS12945 AMIR_RS12950 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12950 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS12960 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMIR_RS12970 PF01661 Macro domain AMIR_RS12975 PF01323 DSBA-like thioredoxin domain AMIR_RS12980 PF07690 Major Facilitator Superfamily AMIR_RS12985 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS12995 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS13015 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS13020 PF01740 STAS domain AMIR_RS13025 PF03861 ANTAR domain AMIR_RS13025 PF13185 GAF domain AMIR_RS13030 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS13035 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIR_RS13045 PF13460 NADH(P)-binding AMIR_RS13050 PF12802 MarR family AMIR_RS13060 PF00067 Cytochrome P450 AMIR_RS13065 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13070 PF00005 ABC transporter AMIR_RS13080 PF10021 Uncharacterized protein conserved in bacteria (DUF2263) AMIR_RS13085 PF12840 Helix-turn-helix domain AMIR_RS13090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS13095 PF01156 Inosine-uridine preferring nucleoside hydrolase AMIR_RS13100 PF01687 Riboflavin kinase AMIR_RS13100 PF07690 Major Facilitator Superfamily AMIR_RS13105 PF00296 Luciferase-like monooxygenase AMIR_RS13110 PF00857 Isochorismatase family AMIR_RS13115 PF00296 Luciferase-like monooxygenase AMIR_RS13120 PF09084 NMT1/THI5 like AMIR_RS13125 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS13130 PF00005 ABC transporter AMIR_RS13145 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS13145 PF00672 HAMP domain AMIR_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS13150 PF00072 Response regulator receiver domain AMIR_RS13150 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS13155 PF00571 CBS domain AMIR_RS13155 PF01595 AMIR_RS13155 AMIR_RS13155 PF03471 Transporter associated domain AMIR_RS13165 PF00107 Zinc-binding dehydrogenase AMIR_RS13165 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS13170 PF00941 FAD binding domain in molybdopterin dehydrogenase AMIR_RS13175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIR_RS13175 PF01799 [2Fe-2S] binding domain AMIR_RS13175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIR_RS13180 PF00743 Flavin-binding monooxygenase-like AMIR_RS13180 PF13450 NAD(P)-binding Rossmann-like domain AMIR_RS13185 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13195 PF02575 YbaB/EbfC DNA-binding family AMIR_RS13215 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS13215 PF07729 FCD domain AMIR_RS13220 PF07690 Major Facilitator Superfamily AMIR_RS13225 PF02733 Dak1 domain AMIR_RS13225 PF02734 DAK2 domain AMIR_RS13230 PF02502 Ribose/Galactose Isomerase AMIR_RS13235 PF00121 Triosephosphate isomerase AMIR_RS13240 PF01261 Xylose isomerase-like TIM barrel AMIR_RS13245 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMIR_RS13245 PF16896 AMIR_RS13245 AMIR_RS13250 PF08798 CRISPR associated protein AMIR_RS13265 PF00005 ABC transporter AMIR_RS13280 PF01266 FAD dependent oxidoreductase AMIR_RS13285 PF00550 Phosphopantetheine attachment site AMIR_RS13290 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS13295 PF07883 Cupin domain AMIR_RS13300 PF09334 tRNA synthetases class I (M) AMIR_RS13305 PF13535 ATP-grasp domain AMIR_RS13310 PF02274 Amidinotransferase AMIR_RS13320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS13325 PF00999 Sodium/hydrogen exchanger family AMIR_RS13330 PF13535 ATP-grasp domain AMIR_RS13335 PF07690 Major Facilitator Superfamily AMIR_RS13365 PF13450 NAD(P)-binding Rossmann-like domain AMIR_RS13380 PF00005 ABC transporter AMIR_RS13390 PF00975 Thioesterase domain AMIR_RS13395 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13395 PF13977 Bacterial transcriptional repressor AMIR_RS13400 PF07690 Major Facilitator Superfamily AMIR_RS13405 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13405 PF00550 Phosphopantetheine attachment site AMIR_RS13405 PF00698 Acyl transferase domain AMIR_RS13405 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13405 PF08659 KR domain AMIR_RS13405 PF08990 Erythronolide synthase docking AMIR_RS13405 PF14765 Polyketide synthase dehydratase AMIR_RS13405 PF16197 AMIR_RS13405 AMIR_RS13410 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13410 PF00550 Phosphopantetheine attachment site AMIR_RS13410 PF00698 Acyl transferase domain AMIR_RS13410 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13410 PF08659 KR domain AMIR_RS13410 PF08990 Erythronolide synthase docking AMIR_RS13410 PF16197 AMIR_RS13410 AMIR_RS13415 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13415 PF00550 Phosphopantetheine attachment site AMIR_RS13415 PF00698 Acyl transferase domain AMIR_RS13415 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13415 PF08659 KR domain AMIR_RS13415 PF08990 Erythronolide synthase docking AMIR_RS13415 PF16197 AMIR_RS13415 AMIR_RS13430 PF00561 alpha/beta hydrolase fold AMIR_RS13440 PF00550 Phosphopantetheine attachment site AMIR_RS13445 PF00501 AMP-binding enzyme AMIR_RS13445 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13450 PF00501 AMP-binding enzyme AMIR_RS13460 PF00155 Aminotransferase class I and II AMIR_RS13470 PF00067 Cytochrome P450 AMIR_RS13475 PF13370 4Fe-4S single cluster domain AMIR_RS13480 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS13480 PF00550 Phosphopantetheine attachment site AMIR_RS13480 PF00698 Acyl transferase domain AMIR_RS13480 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS13480 PF08659 KR domain AMIR_RS13480 PF14765 Polyketide synthase dehydratase AMIR_RS13480 PF16197 AMIR_RS13480 AMIR_RS13485 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13485 PF13191 AAA ATPase domain AMIR_RS13490 PF00005 ABC transporter AMIR_RS13495 PF02687 AMIR_RS13495 AMIR_RS13495 PF12704 MacB-like periplasmic core domain AMIR_RS13500 PF00072 Response regulator receiver domain AMIR_RS13500 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13505 PF07730 Histidine kinase AMIR_RS13505 PF13796 AMIR_RS13505 AMIR_RS13510 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS13520 PF05738 Cna protein B-type domain AMIR_RS13525 PF01596 O-methyltransferase AMIR_RS13535 PF01497 Periplasmic binding protein AMIR_RS13540 PF01032 FecCD transport family AMIR_RS13545 PF00005 ABC transporter AMIR_RS13550 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13555 PF00753 Metallo-beta-lactamase superfamily AMIR_RS13560 PF14117 AMIR_RS13560 AMIR_RS13570 PF00931 NB-ARC domain AMIR_RS13570 PF01636 Phosphotransferase enzyme family AMIR_RS13575 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13580 PF00296 Luciferase-like monooxygenase AMIR_RS13585 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13585 PF13191 AAA ATPase domain AMIR_RS13590 PF00793 DAHP synthetase I family AMIR_RS13595 PF07690 Major Facilitator Superfamily AMIR_RS13600 PF00501 AMP-binding enzyme AMIR_RS13600 PF00550 Phosphopantetheine attachment site AMIR_RS13600 PF00668 Condensation domain AMIR_RS13600 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13605 PF00005 ABC transporter AMIR_RS13610 PF01032 FecCD transport family AMIR_RS13615 PF01032 FecCD transport family AMIR_RS13620 PF01497 Periplasmic binding protein AMIR_RS13625 PF04954 Siderophore-interacting protein AMIR_RS13625 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS13630 PF00550 Phosphopantetheine attachment site AMIR_RS13635 PF00857 Isochorismatase family AMIR_RS13640 PF00501 AMP-binding enzyme AMIR_RS13640 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS13645 PF00425 chorismate binding enzyme AMIR_RS13650 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS13655 PF00561 alpha/beta hydrolase fold AMIR_RS13655 PF08386 TAP-like protein AMIR_RS13660 PF01032 FecCD transport family AMIR_RS13665 PF00005 ABC transporter AMIR_RS13670 PF01497 Periplasmic binding protein AMIR_RS13675 PF13443 Cro/C1-type HTH DNA-binding domain AMIR_RS13680 PF11188 AMIR_RS13680 AMIR_RS13690 PF07730 Histidine kinase AMIR_RS13695 PF00072 Response regulator receiver domain AMIR_RS13695 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13710 PF00113 Enolase, C-terminal TIM barrel domain AMIR_RS13710 PF03952 Enolase, N-terminal domain AMIR_RS13725 PF00005 ABC transporter AMIR_RS13725 PF13732 AMIR_RS13725 AMIR_RS13730 PF12698 ABC-2 family transporter protein AMIR_RS13740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS13740 PF13185 GAF domain AMIR_RS13745 PF13185 GAF domain AMIR_RS13750 PF03734 L,D-transpeptidase catalytic domain AMIR_RS13780 PF01380 SIS domain AMIR_RS13780 PF01418 Helix-turn-helix domain, rpiR family AMIR_RS13785 PF00083 Sugar (and other) transporter AMIR_RS13790 PF01590 GAF domain AMIR_RS13795 PF01979 Amidohydrolase family AMIR_RS13800 PF00072 Response regulator receiver domain AMIR_RS13800 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS13805 PF07730 Histidine kinase AMIR_RS13810 PF00005 ABC transporter AMIR_RS13815 PF02687 AMIR_RS13815 AMIR_RS13815 PF12704 MacB-like periplasmic core domain AMIR_RS13820 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS13830 PF07721 Tetratricopeptide repeat AMIR_RS13830 PF13181 Tetratricopeptide repeat AMIR_RS13830 PF13432 Tetratricopeptide repeat AMIR_RS13835 PF00480 ROK family AMIR_RS13835 PF12802 MarR family AMIR_RS13845 PF14938 Soluble NSF attachment protein, SNAP AMIR_RS13855 PF00122 E1-E2 ATPase AMIR_RS13855 PF00403 Heavy-metal-associated domain AMIR_RS13855 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS13860 PF09678 AMIR_RS13860 AMIR_RS13865 PF13462 Thioredoxin AMIR_RS13870 PF07884 Vitamin K epoxide reductase family AMIR_RS13875 PF04542 Sigma-70 region 2 AMIR_RS13875 PF08281 Sigma-70, region 4 AMIR_RS13880 PF13490 Putative zinc-finger AMIR_RS13885 PF13527 Acetyltransferase (GNAT) domain AMIR_RS13890 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13895 PF00005 ABC transporter AMIR_RS13895 PF00664 ABC transporter transmembrane region AMIR_RS13900 PF00296 Luciferase-like monooxygenase AMIR_RS13905 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13910 PF07690 Major Facilitator Superfamily AMIR_RS13915 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS13915 PF00553 Cellulose binding domain AMIR_RS13915 PF03442 Carbohydrate binding domain X2 AMIR_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS13920 PF03466 LysR substrate binding domain AMIR_RS13925 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS13930 PF13560 Helix-turn-helix domain AMIR_RS13935 PF00171 Aldehyde dehydrogenase family AMIR_RS13950 PF04545 Sigma-70, region 4 AMIR_RS13955 PF03176 MMPL family AMIR_RS13960 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS13970 PF03861 ANTAR domain AMIR_RS13970 PF13185 GAF domain AMIR_RS13975 PF03780 AMIR_RS13975 AMIR_RS13990 PF03780 AMIR_RS13990 AMIR_RS14020 PF00534 Glycosyl transferases group 1 AMIR_RS14020 PF13579 Glycosyl transferase 4-like domain AMIR_RS14025 PF03861 ANTAR domain AMIR_RS14025 PF13185 GAF domain AMIR_RS14030 PF03861 ANTAR domain AMIR_RS14030 PF13185 GAF domain AMIR_RS14035 PF13185 GAF domain AMIR_RS14040 PF13466 STAS domain AMIR_RS14060 PF00072 Response regulator receiver domain AMIR_RS14060 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS14080 PF08241 Methyltransferase domain AMIR_RS14085 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS14090 PF04055 Radical SAM superfamily AMIR_RS14100 PF00534 Glycosyl transferases group 1 AMIR_RS14105 PF02585 GlcNAc-PI de-N-acetylase AMIR_RS14110 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS14115 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS14120 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMIR_RS14125 PF00005 ABC transporter AMIR_RS14130 PF01061 AMIR_RS14130 AMIR_RS14135 PF00550 Phosphopantetheine attachment site AMIR_RS14145 PF05368 NmrA-like family AMIR_RS14150 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14155 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS14155 PF13377 Periplasmic binding protein-like domain AMIR_RS14160 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMIR_RS14165 PF13416 Bacterial extracellular solute-binding protein AMIR_RS14170 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14175 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14185 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMIR_RS14190 PF04616 Glycosyl hydrolases family 43 AMIR_RS14195 PF00754 F5/8 type C domain AMIR_RS14200 PF00561 alpha/beta hydrolase fold AMIR_RS14200 PF08386 TAP-like protein AMIR_RS14205 PF07110 EthD domain AMIR_RS14210 PF13411 MerR HTH family regulatory protein AMIR_RS14220 PF01042 Endoribonuclease L-PSP AMIR_RS14230 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS14230 PF07729 FCD domain AMIR_RS14235 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS14235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS14235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS14240 PF01546 Peptidase family M20/M25/M40 AMIR_RS14240 PF07687 Peptidase dimerisation domain AMIR_RS14245 PF00296 Luciferase-like monooxygenase AMIR_RS14250 PF02538 AMIR_RS14250 AMIR_RS14255 PF01968 Hydantoinase/oxoprolinase AMIR_RS14255 PF05378 AMIR_RS14255 AMIR_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14265 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14270 PF00005 ABC transporter AMIR_RS14270 PF08402 TOBE domain AMIR_RS14275 PF13416 Bacterial extracellular solute-binding protein AMIR_RS14280 PF00106 short chain dehydrogenase AMIR_RS14285 PF12697 Alpha/beta hydrolase family AMIR_RS14290 PF08279 HTH domain AMIR_RS14290 PF13280 AMIR_RS14290 AMIR_RS14295 PF07690 Major Facilitator Superfamily AMIR_RS14300 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14335 PF10824 Protein of unknown function (DUF2580) AMIR_RS14340 PF02575 YbaB/EbfC DNA-binding family AMIR_RS14360 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMIR_RS14365 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMIR_RS14370 PF01497 Periplasmic binding protein AMIR_RS14375 PF01032 FecCD transport family AMIR_RS14380 PF00005 ABC transporter AMIR_RS14390 PF04213 AMIR_RS14390 AMIR_RS14395 PF01494 FAD binding domain AMIR_RS14400 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14400 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS14405 PF06030 AMIR_RS14405 AMIR_RS14415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMIR_RS14420 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIR_RS14430 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS14435 PF00893 Small Multidrug Resistance protein AMIR_RS14440 PF07690 Major Facilitator Superfamily AMIR_RS14445 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14450 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14455 PF13370 4Fe-4S single cluster domain AMIR_RS14460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS14460 PF14759 Reductase C-terminal AMIR_RS14465 PF00067 Cytochrome P450 AMIR_RS14470 PF00067 Cytochrome P450 AMIR_RS14475 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS14480 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS14480 PF00672 HAMP domain AMIR_RS14490 PF01979 Amidohydrolase family AMIR_RS14495 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14495 PF13305 WHG domain AMIR_RS14500 PF00501 AMP-binding enzyme AMIR_RS14500 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS14515 PF00550 Phosphopantetheine attachment site AMIR_RS14530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS14535 PF00550 Phosphopantetheine attachment site AMIR_RS14545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS14550 PF13569 AMIR_RS14550 AMIR_RS14555 PF00360 Phytochrome region AMIR_RS14555 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS14555 PF01590 GAF domain AMIR_RS14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS14555 PF08446 PAS fold AMIR_RS14560 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS14565 PF00072 Response regulator receiver domain AMIR_RS14575 PF05593 AMIR_RS14575 AMIR_RS14585 PF01638 HxlR-like helix-turn-helix AMIR_RS14590 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14610 PF01547 Bacterial extracellular solute-binding protein AMIR_RS14615 PF10022 AMIR_RS14615 AMIR_RS14620 PF08220 DeoR-like helix-turn-helix domain AMIR_RS14620 PF13377 Periplasmic binding protein-like domain AMIR_RS14625 PF03706 AMIR_RS14625 AMIR_RS14630 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14630 PF03704 Bacterial transcriptional activator domain AMIR_RS14630 PF13191 AAA ATPase domain AMIR_RS14655 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS14660 PF07676 WD40-like Beta Propeller Repeat AMIR_RS14665 PF14065 AMIR_RS14665 AMIR_RS14670 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS14675 PF14339 AMIR_RS14675 AMIR_RS14685 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14685 PF03704 Bacterial transcriptional activator domain AMIR_RS14685 PF13176 Tetratricopeptide repeat AMIR_RS14685 PF13424 Tetratricopeptide repeat AMIR_RS14695 PF04984 Phage tail sheath protein AMIR_RS14700 PF06841 AMIR_RS14700 AMIR_RS14715 PF06841 AMIR_RS14715 AMIR_RS14720 PF01476 LysM domain AMIR_RS14725 PF05954 Phage late control gene D protein (GPD) AMIR_RS14730 PF05488 PAAR motif AMIR_RS14735 PF04965 Gene 25-like lysozyme AMIR_RS14740 PF04865 AMIR_RS14740 AMIR_RS14745 PF09684 AMIR_RS14745 AMIR_RS14755 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS14760 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS14770 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS14770 PF03704 Bacterial transcriptional activator domain AMIR_RS14770 PF13191 AAA ATPase domain AMIR_RS14780 PF00582 Universal stress protein family AMIR_RS14790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS14815 PF01653 NAD-dependent DNA ligase adenylation domain AMIR_RS14815 PF03120 NAD-dependent DNA ligase OB-fold domain AMIR_RS14815 PF12826 Helix-hairpin-helix motif AMIR_RS14825 PF00082 Subtilase family AMIR_RS14830 PF13569 AMIR_RS14830 AMIR_RS14835 PF00155 Aminotransferase class I and II AMIR_RS14840 PF00561 alpha/beta hydrolase fold AMIR_RS14840 PF08386 TAP-like protein AMIR_RS14845 PF07730 Histidine kinase AMIR_RS14850 PF00561 alpha/beta hydrolase fold AMIR_RS14850 PF08386 TAP-like protein AMIR_RS14860 PF01261 Xylose isomerase-like TIM barrel AMIR_RS14865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS14870 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14870 PF13977 Bacterial transcriptional repressor AMIR_RS14880 PF00293 NUDIX domain AMIR_RS14885 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS14890 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS14890 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS14895 PF07690 Major Facilitator Superfamily AMIR_RS14900 PF13560 Helix-turn-helix domain AMIR_RS14905 PF07920 Protein of unknown function (DUF1684) AMIR_RS14915 PF13416 Bacterial extracellular solute-binding protein AMIR_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS14930 PF01055 Glycosyl hydrolases family 31 AMIR_RS14930 PF13802 Galactose mutarotase-like AMIR_RS14935 PF12840 Helix-turn-helix domain AMIR_RS14940 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS14940 PF13377 Periplasmic binding protein-like domain AMIR_RS14965 PF01381 Helix-turn-helix AMIR_RS14965 PF07883 Cupin domain AMIR_RS14970 PF13489 Methyltransferase domain AMIR_RS14985 PF00561 alpha/beta hydrolase fold AMIR_RS14990 PF04978 Protein of unknown function (DUF664) AMIR_RS14995 PF13649 Methyltransferase domain AMIR_RS15000 PF01381 Helix-turn-helix AMIR_RS15000 PF07883 Cupin domain AMIR_RS15005 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS15010 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15010 PF16859 AMIR_RS15010 AMIR_RS15020 PF13411 MerR HTH family regulatory protein AMIR_RS15025 PF00072 Response regulator receiver domain AMIR_RS15025 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS15030 PF07730 Histidine kinase AMIR_RS15035 PF00005 ABC transporter AMIR_RS15040 PF02687 AMIR_RS15040 AMIR_RS15040 PF12704 MacB-like periplasmic core domain AMIR_RS15045 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMIR_RS15050 PF00128 Alpha amylase, catalytic domain AMIR_RS15050 PF16657 AMIR_RS15050 AMIR_RS15055 PF12680 SnoaL-like domain AMIR_RS15060 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS15065 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15080 PF01699 Sodium/calcium exchanger protein AMIR_RS15085 PF04954 Siderophore-interacting protein AMIR_RS15085 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS15095 PF02567 Phenazine biosynthesis-like protein AMIR_RS15100 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15105 PF03358 NADPH-dependent FMN reductase AMIR_RS15110 PF05406 WGR domain AMIR_RS15110 PF13569 AMIR_RS15110 AMIR_RS15120 PF00459 Inositol monophosphatase family AMIR_RS15125 PF00005 ABC transporter AMIR_RS15125 PF00664 ABC transporter transmembrane region AMIR_RS15130 PF00005 ABC transporter AMIR_RS15130 PF00664 ABC transporter transmembrane region AMIR_RS15135 PF01670 Glycosyl hydrolase family 12 AMIR_RS15145 PF13245 Part of AAA domain AMIR_RS15155 PF00583 Acetyltransferase (GNAT) family AMIR_RS15160 PF09414 RNA ligase AMIR_RS15160 PF13671 AAA domain AMIR_RS15165 PF01909 Nucleotidyltransferase domain AMIR_RS15165 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS15165 PF04928 Poly(A) polymerase central domain AMIR_RS15165 PF13563 2'-5' RNA ligase superfamily AMIR_RS15175 PF12867 DinB superfamily AMIR_RS15180 PF02589 Uncharacterised ACR, YkgG family COG1556 AMIR_RS15185 PF02589 Uncharacterised ACR, YkgG family COG1556 AMIR_RS15185 PF11870 AMIR_RS15185 AMIR_RS15185 PF13183 4Fe-4S dicluster domain AMIR_RS15190 PF02754 AMIR_RS15190 AMIR_RS15195 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS15195 PF07729 FCD domain AMIR_RS15205 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS15205 PF13377 Periplasmic binding protein-like domain AMIR_RS15210 PF00005 ABC transporter AMIR_RS15215 PF02653 AMIR_RS15215 AMIR_RS15220 PF02653 AMIR_RS15220 AMIR_RS15225 PF13407 Periplasmic binding protein domain AMIR_RS15230 PF06134 L-rhamnose isomerase (RhaA) AMIR_RS15235 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS15235 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS15240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS15240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS15250 PF01979 Amidohydrolase family AMIR_RS15255 PF12680 SnoaL-like domain AMIR_RS15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15260 PF03466 LysR substrate binding domain AMIR_RS15265 PF09335 AMIR_RS15265 AMIR_RS15270 PF07730 Histidine kinase AMIR_RS15275 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15280 PF04542 Sigma-70 region 2 AMIR_RS15280 PF13229 Right handed beta helix region AMIR_RS15285 PF02656 AMIR_RS15285 AMIR_RS15290 PF02656 AMIR_RS15290 AMIR_RS15295 PF00067 Cytochrome P450 AMIR_RS15300 PF12840 Helix-turn-helix domain AMIR_RS15310 PF01126 Heme oxygenase AMIR_RS15315 PF07859 alpha/beta hydrolase fold AMIR_RS15325 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS15330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS15345 PF00005 ABC transporter AMIR_RS15350 PF00005 ABC transporter AMIR_RS15355 PF00733 Asparagine synthase AMIR_RS15355 PF13537 Glutamine amidotransferase domain AMIR_RS15370 PF00893 Small Multidrug Resistance protein AMIR_RS15375 PF00202 Aminotransferase class-III AMIR_RS15380 PF00202 Aminotransferase class-III AMIR_RS15385 PF00171 Aldehyde dehydrogenase family AMIR_RS15390 PF01717 Cobalamin-independent synthase, Catalytic domain AMIR_RS15390 PF08267 Cobalamin-independent synthase, N-terminal domain AMIR_RS15395 PF00891 O-methyltransferase AMIR_RS15400 PF00144 Beta-lactamase AMIR_RS15420 PF02575 YbaB/EbfC DNA-binding family AMIR_RS15425 PF13586 AMIR_RS15425 AMIR_RS15430 PF13340 AMIR_RS15430 AMIR_RS15435 PF01042 Endoribonuclease L-PSP AMIR_RS15440 PF12802 MarR family AMIR_RS15445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS15445 PF00672 HAMP domain AMIR_RS15445 PF12729 AMIR_RS15445 AMIR_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15450 PF03466 LysR substrate binding domain AMIR_RS15455 PF00892 EamA-like transporter family AMIR_RS15460 PF13560 Helix-turn-helix domain AMIR_RS15465 PF07690 Major Facilitator Superfamily AMIR_RS15475 PF01022 Bacterial regulatory protein, arsR family AMIR_RS15480 PF00122 E1-E2 ATPase AMIR_RS15480 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS15485 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS15490 PF00480 ROK family AMIR_RS15505 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS15505 PF05221 S-adenosyl-L-homocysteine hydrolase AMIR_RS15510 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMIR_RS15510 PF02772 S-adenosylmethionine synthetase, central domain AMIR_RS15510 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMIR_RS15515 PF13527 Acetyltransferase (GNAT) domain AMIR_RS15525 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS15525 PF16499 AMIR_RS15525 AMIR_RS15530 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMIR_RS15530 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS15535 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS15535 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS15540 PF01494 FAD binding domain AMIR_RS15545 PF00155 Aminotransferase class I and II AMIR_RS15550 PF01037 AsnC family AMIR_RS15550 PF13404 AsnC-type helix-turn-helix domain AMIR_RS15560 PF12532 AMIR_RS15560 AMIR_RS15585 PF05368 NmrA-like family AMIR_RS15590 PF00296 Luciferase-like monooxygenase AMIR_RS15595 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS15620 PF01565 FAD binding domain AMIR_RS15625 PF00248 Aldo/keto reductase family AMIR_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS15630 PF03466 LysR substrate binding domain AMIR_RS15635 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS15640 PF00550 Phosphopantetheine attachment site AMIR_RS15645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS15645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIR_RS15650 PF00067 Cytochrome P450 AMIR_RS15655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIR_RS15660 PF00202 Aminotransferase class-III AMIR_RS15660 PF03109 AMIR_RS15660 AMIR_RS15670 PF04237 YjbR AMIR_RS15675 PF13649 Methyltransferase domain AMIR_RS15685 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS15690 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15690 PF13305 WHG domain AMIR_RS15695 PF01791 DeoC/LacD family aldolase AMIR_RS15700 PF00107 Zinc-binding dehydrogenase AMIR_RS15700 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15705 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15710 PF00916 AMIR_RS15710 AMIR_RS15710 PF01740 STAS domain AMIR_RS15715 PF03483 B3/4 domain AMIR_RS15720 PF00067 Cytochrome P450 AMIR_RS15725 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15725 PF13305 WHG domain AMIR_RS15730 PF01965 DJ-1/PfpI family AMIR_RS15740 PF13576 Pentapeptide repeats (9 copies) AMIR_RS15745 PF02040 AMIR_RS15745 AMIR_RS15750 PF00149 Calcineurin-like phosphoesterase AMIR_RS15755 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15760 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS15760 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS15775 PF00317 Ribonucleotide reductase, all-alpha domain AMIR_RS15775 PF02867 Ribonucleotide reductase, barrel domain AMIR_RS15775 PF03477 ATP cone domain AMIR_RS15780 PF00268 Ribonucleotide reductase, small chain AMIR_RS15785 PF01566 AMIR_RS15785 AMIR_RS15790 PF06114 Domain of unknown function (DUF955) AMIR_RS15790 PF13560 Helix-turn-helix domain AMIR_RS15800 PF03176 MMPL family AMIR_RS15805 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS15810 PF01740 STAS domain AMIR_RS15815 PF16113 AMIR_RS15815 AMIR_RS15845 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15845 PF13602 Zinc-binding dehydrogenase AMIR_RS15850 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS15855 PF17195 AMIR_RS15855 AMIR_RS15860 PF00005 ABC transporter AMIR_RS15860 PF00664 ABC transporter transmembrane region AMIR_RS15865 PF00999 Sodium/hydrogen exchanger family AMIR_RS15875 PF00891 O-methyltransferase AMIR_RS15885 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15885 PF00550 Phosphopantetheine attachment site AMIR_RS15885 PF00698 Acyl transferase domain AMIR_RS15885 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15885 PF08659 KR domain AMIR_RS15885 PF08990 Erythronolide synthase docking AMIR_RS15885 PF16197 AMIR_RS15885 AMIR_RS15890 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15890 PF00550 Phosphopantetheine attachment site AMIR_RS15890 PF00698 Acyl transferase domain AMIR_RS15890 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15890 PF08659 KR domain AMIR_RS15890 PF08990 Erythronolide synthase docking AMIR_RS15890 PF14765 Polyketide synthase dehydratase AMIR_RS15890 PF16197 AMIR_RS15890 AMIR_RS15895 PF00797 N-acetyltransferase AMIR_RS15900 PF04072 Leucine carboxyl methyltransferase AMIR_RS15905 PF01494 FAD binding domain AMIR_RS15910 PF04820 Tryptophan halogenase AMIR_RS15915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS15915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS15920 PF00550 Phosphopantetheine attachment site AMIR_RS15925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS15925 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS15925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS15935 PF01596 O-methyltransferase AMIR_RS15940 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS15940 PF03704 Bacterial transcriptional activator domain AMIR_RS15940 PF13191 AAA ATPase domain AMIR_RS15945 PF01757 AMIR_RS15945 AMIR_RS15950 PF03795 YCII-related domain AMIR_RS15955 PF02543 Carbamoyltransferase AMIR_RS15955 PF16861 AMIR_RS15955 AMIR_RS15965 PF01220 Dehydroquinase class II AMIR_RS15970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS15980 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15980 PF00501 AMP-binding enzyme AMIR_RS15980 PF00550 Phosphopantetheine attachment site AMIR_RS15980 PF00698 Acyl transferase domain AMIR_RS15980 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15980 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS15980 PF08659 KR domain AMIR_RS15980 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS15980 PF13602 Zinc-binding dehydrogenase AMIR_RS15980 PF14765 Polyketide synthase dehydratase AMIR_RS15980 PF16197 AMIR_RS15980 AMIR_RS15985 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS15985 PF00550 Phosphopantetheine attachment site AMIR_RS15985 PF00698 Acyl transferase domain AMIR_RS15985 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS15985 PF08659 KR domain AMIR_RS15985 PF14765 Polyketide synthase dehydratase AMIR_RS15985 PF16197 AMIR_RS15985 AMIR_RS15990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS15995 PF00106 short chain dehydrogenase AMIR_RS16000 PF14325 AMIR_RS16000 AMIR_RS16005 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16005 PF13977 Bacterial transcriptional repressor AMIR_RS16010 PF00067 Cytochrome P450 AMIR_RS16015 PF00175 Oxidoreductase NAD-binding domain AMIR_RS16015 PF00258 Flavodoxin AMIR_RS16015 PF00667 FAD binding domain AMIR_RS16020 PF00140 Sigma-70 factor, region 1 AMIR_RS16020 PF04539 Sigma-70 region 3 AMIR_RS16020 PF04542 Sigma-70 region 2 AMIR_RS16020 PF04545 Sigma-70, region 4 AMIR_RS16025 PF13649 Methyltransferase domain AMIR_RS16030 PF06965 Na+/H+ antiporter 1 AMIR_RS16035 PF06965 Na+/H+ antiporter 1 AMIR_RS16040 PF01872 RibD C-terminal domain AMIR_RS16045 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16050 PF16116 AMIR_RS16050 AMIR_RS16050 PF16173 AMIR_RS16050 AMIR_RS16055 PF06224 AMIR_RS16055 AMIR_RS16060 PF00775 Dioxygenase AMIR_RS16065 PF03422 Carbohydrate binding module (family 6) AMIR_RS16065 PF04616 Glycosyl hydrolases family 43 AMIR_RS16070 PF00331 Glycosyl hydrolase family 10 AMIR_RS16070 PF00553 Cellulose binding domain AMIR_RS16075 PF00553 Cellulose binding domain AMIR_RS16075 PF01341 Glycosyl hydrolases family 6 AMIR_RS16080 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS16080 PF00553 Cellulose binding domain AMIR_RS16085 PF00280 Potato inhibitor I family AMIR_RS16090 PF07730 Histidine kinase AMIR_RS16095 PF00072 Response regulator receiver domain AMIR_RS16095 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16100 PF16316 AMIR_RS16100 AMIR_RS16105 PF09359 VTC domain AMIR_RS16110 PF00553 Cellulose binding domain AMIR_RS16110 PF08757 AMIR_RS16110 AMIR_RS16110 PF13290 AMIR_RS16110 AMIR_RS16115 PF04892 AMIR_RS16115 AMIR_RS16120 PF09594 AMIR_RS16120 AMIR_RS16125 PF00106 short chain dehydrogenase AMIR_RS16130 PF00248 Aldo/keto reductase family AMIR_RS16135 PF13560 Helix-turn-helix domain AMIR_RS16140 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS16140 PF00582 Universal stress protein family AMIR_RS16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS16140 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIR_RS16140 PF13493 Domain of unknown function (DUF4118) AMIR_RS16145 PF02669 AMIR_RS16145 AMIR_RS16150 PF00122 E1-E2 ATPase AMIR_RS16150 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS16155 PF03814 AMIR_RS16155 AMIR_RS16160 PF09604 AMIR_RS16160 AMIR_RS16170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS16170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS16180 PF13581 Histidine kinase-like ATPase domain AMIR_RS16185 PF13466 STAS domain AMIR_RS16190 PF10517 AMIR_RS16190 AMIR_RS16195 PF02698 DUF218 domain AMIR_RS16200 PF00239 Resolvase, N terminal domain AMIR_RS16200 PF07508 Recombinase AMIR_RS16310 PF05133 Phage portal protein, SPP1 Gp6-like AMIR_RS16315 PF03354 AMIR_RS16315 AMIR_RS16320 PF05119 AMIR_RS16320 AMIR_RS16335 PF06067 AMIR_RS16335 AMIR_RS16340 PF13359 AMIR_RS16340 AMIR_RS16340 PF13613 AMIR_RS16340 AMIR_RS16355 PF08241 Methyltransferase domain AMIR_RS16360 PF08241 Methyltransferase domain AMIR_RS16365 PF00067 Cytochrome P450 AMIR_RS16370 PF00067 Cytochrome P450 AMIR_RS16375 PF01596 O-methyltransferase AMIR_RS16380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS16380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS16385 PF00550 Phosphopantetheine attachment site AMIR_RS16390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS16390 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS16390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS16400 PF02543 Carbamoyltransferase AMIR_RS16400 PF16861 AMIR_RS16400 AMIR_RS16410 PF00480 ROK family AMIR_RS16415 PF01220 Dehydroquinase class II AMIR_RS16420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS16425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS16430 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS16435 PF01494 FAD binding domain AMIR_RS16440 PF00797 N-acetyltransferase AMIR_RS16445 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16445 PF00550 Phosphopantetheine attachment site AMIR_RS16445 PF00698 Acyl transferase domain AMIR_RS16445 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16445 PF08659 KR domain AMIR_RS16445 PF13602 Zinc-binding dehydrogenase AMIR_RS16445 PF14765 Polyketide synthase dehydratase AMIR_RS16445 PF16197 AMIR_RS16445 AMIR_RS16450 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16450 PF00550 Phosphopantetheine attachment site AMIR_RS16450 PF00698 Acyl transferase domain AMIR_RS16450 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16450 PF08659 KR domain AMIR_RS16450 PF08990 Erythronolide synthase docking AMIR_RS16450 PF14765 Polyketide synthase dehydratase AMIR_RS16450 PF16197 AMIR_RS16450 AMIR_RS16455 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS16455 PF00501 AMP-binding enzyme AMIR_RS16455 PF00550 Phosphopantetheine attachment site AMIR_RS16455 PF00698 Acyl transferase domain AMIR_RS16455 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS16455 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16455 PF08659 KR domain AMIR_RS16455 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS16455 PF13602 Zinc-binding dehydrogenase AMIR_RS16455 PF14765 Polyketide synthase dehydratase AMIR_RS16455 PF16197 AMIR_RS16455 AMIR_RS16465 PF01761 3-dehydroquinate synthase AMIR_RS16470 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16470 PF13191 AAA ATPase domain AMIR_RS16475 PF13673 Acetyltransferase (GNAT) domain AMIR_RS16480 PF13560 Helix-turn-helix domain AMIR_RS16490 PF03664 Glycosyl hydrolase family 62 AMIR_RS16495 PF04616 Glycosyl hydrolases family 43 AMIR_RS16500 PF00553 Cellulose binding domain AMIR_RS16505 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16505 PF13377 Periplasmic binding protein-like domain AMIR_RS16510 PF00583 Acetyltransferase (GNAT) family AMIR_RS16515 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16520 PF00857 Isochorismatase family AMIR_RS16525 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS16525 PF03704 Bacterial transcriptional activator domain AMIR_RS16530 PF06197 AMIR_RS16530 AMIR_RS16535 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16535 PF13305 WHG domain AMIR_RS16540 PF00106 short chain dehydrogenase AMIR_RS16545 PF01361 Tautomerase enzyme AMIR_RS16550 PF01872 RibD C-terminal domain AMIR_RS16555 PF00072 Response regulator receiver domain AMIR_RS16555 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS16560 PF07730 Histidine kinase AMIR_RS16565 PF00561 alpha/beta hydrolase fold AMIR_RS16575 PF13026 Protein of unknown function (DUF3887) AMIR_RS16580 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS16585 PF09967 AMIR_RS16585 AMIR_RS16585 PF13203 AMIR_RS16585 AMIR_RS16590 PF07728 AAA domain (dynein-related subfamily) AMIR_RS16600 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS16605 PF12802 MarR family AMIR_RS16605 PF13936 Helix-turn-helix domain AMIR_RS16610 PF00326 Prolyl oligopeptidase family AMIR_RS16610 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMIR_RS16620 PF00733 Asparagine synthase AMIR_RS16625 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMIR_RS16630 PF13471 AMIR_RS16630 AMIR_RS16640 PF01965 DJ-1/PfpI family AMIR_RS16640 PF12833 Helix-turn-helix domain AMIR_RS16645 PF07883 Cupin domain AMIR_RS16650 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16655 PF00106 short chain dehydrogenase AMIR_RS16660 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS16660 PF03442 Carbohydrate binding domain X2 AMIR_RS16665 PF13416 Bacterial extracellular solute-binding protein AMIR_RS16680 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16680 PF13377 Periplasmic binding protein-like domain AMIR_RS16685 PF13460 NADH(P)-binding AMIR_RS16690 PF01638 HxlR-like helix-turn-helix AMIR_RS16700 PF12680 SnoaL-like domain AMIR_RS16705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS16710 PF06197 AMIR_RS16710 AMIR_RS16715 PF12697 Alpha/beta hydrolase family AMIR_RS16730 PF12697 Alpha/beta hydrolase family AMIR_RS16740 PF00106 short chain dehydrogenase AMIR_RS16745 PF04226 AMIR_RS16745 AMIR_RS16750 PF00135 Carboxylesterase family AMIR_RS16755 PF00753 Metallo-beta-lactamase superfamily AMIR_RS16765 PF08386 TAP-like protein AMIR_RS16770 PF07730 Histidine kinase AMIR_RS16770 PF13581 Histidine kinase-like ATPase domain AMIR_RS16775 PF00583 Acetyltransferase (GNAT) family AMIR_RS16785 PF00107 Zinc-binding dehydrogenase AMIR_RS16785 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16795 PF13420 Acetyltransferase (GNAT) domain AMIR_RS16800 PF01872 RibD C-terminal domain AMIR_RS16805 PF00248 Aldo/keto reductase family AMIR_RS16810 PF12833 Helix-turn-helix domain AMIR_RS16810 PF12852 Cupin AMIR_RS16815 PF04978 Protein of unknown function (DUF664) AMIR_RS16820 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMIR_RS16820 PF09363 XFP C-terminal domain AMIR_RS16820 PF09364 XFP N-terminal domain AMIR_RS16825 PF00871 Acetokinase family AMIR_RS16835 PF00293 NUDIX domain AMIR_RS16855 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS16860 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS16860 PF13823 Alcohol dehydrogenase GroES-associated AMIR_RS16870 PF07690 Major Facilitator Superfamily AMIR_RS16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS16875 PF03466 LysR substrate binding domain AMIR_RS16885 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS16885 PF13377 Periplasmic binding protein-like domain AMIR_RS16890 PF12831 FAD dependent oxidoreductase AMIR_RS16895 PF01968 Hydantoinase/oxoprolinase AMIR_RS16895 PF05378 AMIR_RS16895 AMIR_RS16915 PF02525 Flavodoxin-like fold AMIR_RS16920 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16930 PF13302 Acetyltransferase (GNAT) domain AMIR_RS16940 PF09924 Uncharacterized conserved protein (DUF2156) AMIR_RS16945 PF00756 Putative esterase AMIR_RS16955 PF07969 Amidohydrolase family AMIR_RS16965 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS16970 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS16970 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS16975 PF04024 AMIR_RS16975 AMIR_RS16980 PF00535 Glycosyl transferase family 2 AMIR_RS16985 PF13397 Domain of unknown function (DUF4109) AMIR_RS16990 PF00293 NUDIX domain AMIR_RS17000 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS17005 PF01381 Helix-turn-helix AMIR_RS17005 PF07883 Cupin domain AMIR_RS17010 PF00265 Thymidine kinase AMIR_RS17015 PF03551 Transcriptional regulator PadR-like family AMIR_RS17025 PF11700 AMIR_RS17025 AMIR_RS17030 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS17040 PF00563 EAL domain AMIR_RS17040 PF00990 GGDEF domain AMIR_RS17040 PF08447 PAS fold AMIR_RS17050 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS17055 PF02735 Ku70/Ku80 beta-barrel domain AMIR_RS17060 PF13302 Acetyltransferase (GNAT) domain AMIR_RS17065 PF11296 AMIR_RS17065 AMIR_RS17070 PF01957 NfeD-like C-terminal, partner-binding AMIR_RS17075 PF01145 SPFH domain / Band 7 family AMIR_RS17085 PF01022 Bacterial regulatory protein, arsR family AMIR_RS17090 PF01758 Sodium Bile acid symporter family AMIR_RS17095 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIR_RS17105 PF03861 ANTAR domain AMIR_RS17110 PF01425 Amidase AMIR_RS17115 PF13576 Pentapeptide repeats (9 copies) AMIR_RS17125 PF11706 CGNR zinc finger AMIR_RS17130 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17145 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS17150 PF00557 Metallopeptidase family M24 AMIR_RS17155 PF13560 Helix-turn-helix domain AMIR_RS17160 PF08279 HTH domain AMIR_RS17160 PF13280 AMIR_RS17160 AMIR_RS17165 PF01494 FAD binding domain AMIR_RS17170 PF00455 AMIR_RS17170 AMIR_RS17170 PF08220 DeoR-like helix-turn-helix domain AMIR_RS17175 PF00293 NUDIX domain AMIR_RS17175 PF07690 Major Facilitator Superfamily AMIR_RS17185 PF00929 Exonuclease AMIR_RS17195 PF00589 Phage integrase family AMIR_RS17200 PF12833 Helix-turn-helix domain AMIR_RS17205 PF01872 RibD C-terminal domain AMIR_RS17220 PF11290 AMIR_RS17220 AMIR_RS17225 PF00326 Prolyl oligopeptidase family AMIR_RS17230 PF02016 LD-carboxypeptidase AMIR_RS17235 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS17250 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS17255 PF01636 Phosphotransferase enzyme family AMIR_RS17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS17260 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS17270 PF00005 ABC transporter AMIR_RS17270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS17275 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17275 PF12911 AMIR_RS17275 AMIR_RS17280 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS17290 PF04951 D-aminopeptidase AMIR_RS17295 PF01546 Peptidase family M20/M25/M40 AMIR_RS17295 PF07687 Peptidase dimerisation domain AMIR_RS17305 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS17305 PF13377 Periplasmic binding protein-like domain AMIR_RS17310 PF04616 Glycosyl hydrolases family 43 AMIR_RS17315 PF01547 Bacterial extracellular solute-binding protein AMIR_RS17320 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17325 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS17330 PF00589 Phage integrase family AMIR_RS17340 PF05729 NACHT domain AMIR_RS17345 PF00756 Putative esterase AMIR_RS17355 PF10824 Protein of unknown function (DUF2580) AMIR_RS17360 PF02575 YbaB/EbfC DNA-binding family AMIR_RS17365 PF14011 EspG family AMIR_RS17385 PF08279 HTH domain AMIR_RS17385 PF13280 AMIR_RS17385 AMIR_RS17390 PF00248 Aldo/keto reductase family AMIR_RS17395 PF06224 AMIR_RS17395 AMIR_RS17400 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17405 PF00107 Zinc-binding dehydrogenase AMIR_RS17405 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS17415 PF00293 NUDIX domain AMIR_RS17420 PF01042 Endoribonuclease L-PSP AMIR_RS17425 PF08279 HTH domain AMIR_RS17425 PF13280 AMIR_RS17425 AMIR_RS17430 PF00553 Cellulose binding domain AMIR_RS17430 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS17435 PF13411 MerR HTH family regulatory protein AMIR_RS17440 PF00376 MerR family regulatory protein AMIR_RS17440 PF13411 MerR HTH family regulatory protein AMIR_RS17445 PF05139 Erythromycin esterase AMIR_RS17455 PF02698 DUF218 domain AMIR_RS17460 PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 AMIR_RS17460 PF13489 Methyltransferase domain AMIR_RS17465 PF00149 Calcineurin-like phosphoesterase AMIR_RS17465 PF13671 AAA domain AMIR_RS17465 PF16536 AMIR_RS17465 AMIR_RS17465 PF16542 AMIR_RS17465 AMIR_RS17470 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS17475 PF01494 FAD binding domain AMIR_RS17480 PF08719 Domain of unknown function (DUF1768) AMIR_RS17485 PF00149 Calcineurin-like phosphoesterase AMIR_RS17495 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS17500 PF00069 Protein kinase domain AMIR_RS17500 PF16918 AMIR_RS17500 AMIR_RS17500 PF16919 AMIR_RS17500 AMIR_RS17505 PF13672 Protein phosphatase 2C AMIR_RS17510 PF12802 MarR family AMIR_RS17515 PF00067 Cytochrome P450 AMIR_RS17525 PF12840 Helix-turn-helix domain AMIR_RS17530 PF01636 Phosphotransferase enzyme family AMIR_RS17535 PF00107 Zinc-binding dehydrogenase AMIR_RS17535 PF16884 AMIR_RS17535 AMIR_RS17540 PF12833 Helix-turn-helix domain AMIR_RS17540 PF14525 AMIR_RS17540 AMIR_RS17545 PF00270 DEAD/DEAH box helicase AMIR_RS17545 PF00271 Helicase conserved C-terminal domain AMIR_RS17545 PF04408 Helicase associated domain (HA2) AMIR_RS17545 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMIR_RS17545 PF11898 AMIR_RS17545 AMIR_RS17550 PF13714 Phosphoenolpyruvate phosphomutase AMIR_RS17560 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS17565 PF02673 AMIR_RS17565 AMIR_RS17570 PF00296 Luciferase-like monooxygenase AMIR_RS17575 PF00248 Aldo/keto reductase family AMIR_RS17595 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AMIR_RS17600 PF13302 Acetyltransferase (GNAT) domain AMIR_RS17605 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17605 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS17610 PF00005 ABC transporter AMIR_RS17615 PF04954 Siderophore-interacting protein AMIR_RS17615 PF08021 Siderophore-interacting FAD-binding domain AMIR_RS17625 PF01614 Bacterial transcriptional regulator AMIR_RS17625 PF09339 IclR helix-turn-helix domain AMIR_RS17635 PF00553 Cellulose binding domain AMIR_RS17640 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS17640 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS17645 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS17660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS17665 PF03435 Saccharopine dehydrogenase AMIR_RS17665 PF16653 AMIR_RS17665 AMIR_RS17680 PF03167 Uracil DNA glycosylase superfamily AMIR_RS17690 PF07690 Major Facilitator Superfamily AMIR_RS17700 PF13673 Acetyltransferase (GNAT) domain AMIR_RS17710 PF00082 Subtilase family AMIR_RS17710 PF05922 Peptidase inhibitor I9 AMIR_RS17720 PF00501 AMP-binding enzyme AMIR_RS17720 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17740 PF04542 Sigma-70 region 2 AMIR_RS17740 PF08281 Sigma-70, region 4 AMIR_RS17745 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS17750 PF00296 Luciferase-like monooxygenase AMIR_RS17755 PF01758 Sodium Bile acid symporter family AMIR_RS17760 PF01636 Phosphotransferase enzyme family AMIR_RS17765 PF00082 Subtilase family AMIR_RS17770 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17775 PF00248 Aldo/keto reductase family AMIR_RS17780 PF07859 alpha/beta hydrolase fold AMIR_RS17785 PF13527 Acetyltransferase (GNAT) domain AMIR_RS17785 PF13530 Sterol carrier protein domain AMIR_RS17790 PF04616 Glycosyl hydrolases family 43 AMIR_RS17800 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS17800 PF00931 NB-ARC domain AMIR_RS17800 PF03704 Bacterial transcriptional activator domain AMIR_RS17800 PF13374 Tetratricopeptide repeat AMIR_RS17800 PF13424 Tetratricopeptide repeat AMIR_RS17810 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS17815 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS17820 PF05977 Transmembrane secretion effector AMIR_RS17825 PF00067 Cytochrome P450 AMIR_RS17830 PF00501 AMP-binding enzyme AMIR_RS17830 PF00550 Phosphopantetheine attachment site AMIR_RS17830 PF00668 Condensation domain AMIR_RS17830 PF00975 Thioesterase domain AMIR_RS17830 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17830 PF13745 HxxPF-repeated domain AMIR_RS17835 PF00501 AMP-binding enzyme AMIR_RS17835 PF00550 Phosphopantetheine attachment site AMIR_RS17835 PF00668 Condensation domain AMIR_RS17835 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17835 PF13745 HxxPF-repeated domain AMIR_RS17840 PF03621 MbtH-like protein AMIR_RS17845 PF04738 AMIR_RS17845 AMIR_RS17850 PF00501 AMP-binding enzyme AMIR_RS17850 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17855 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS17860 PF00550 Phosphopantetheine attachment site AMIR_RS17865 PF04738 AMIR_RS17865 AMIR_RS17870 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMIR_RS17880 PF13671 AAA domain AMIR_RS17885 PF01891 Cobalt uptake substrate-specific transmembrane region AMIR_RS17890 PF02553 AMIR_RS17890 AMIR_RS17895 PF02361 Cobalt transport protein AMIR_RS17900 PF00005 ABC transporter AMIR_RS17910 PF00376 MerR family regulatory protein AMIR_RS17915 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS17920 PF01266 FAD dependent oxidoreductase AMIR_RS17925 PF01272 Transcription elongation factor, GreA/GreB, C-term AMIR_RS17935 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS17940 PF00067 Cytochrome P450 AMIR_RS17945 PF03621 MbtH-like protein AMIR_RS17950 PF00501 AMP-binding enzyme AMIR_RS17950 PF00550 Phosphopantetheine attachment site AMIR_RS17950 PF00668 Condensation domain AMIR_RS17950 PF00975 Thioesterase domain AMIR_RS17950 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS17950 PF13489 Methyltransferase domain AMIR_RS17950 PF13745 HxxPF-repeated domain AMIR_RS17960 PF17195 AMIR_RS17960 AMIR_RS17970 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS17980 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS17985 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS17990 PF03995 Peptidase inhibitor family I36 AMIR_RS17990 PF13416 Bacterial extracellular solute-binding protein AMIR_RS17995 PF02687 AMIR_RS17995 AMIR_RS18000 PF00005 ABC transporter AMIR_RS18005 PF00732 GMC oxidoreductase AMIR_RS18005 PF00890 FAD binding domain AMIR_RS18005 PF05199 GMC oxidoreductase AMIR_RS18010 PF03364 Polyketide cyclase / dehydrase and lipid transport AMIR_RS18015 PF00202 Aminotransferase class-III AMIR_RS18025 PF00171 Aldehyde dehydrogenase family AMIR_RS18035 PF09924 Uncharacterized conserved protein (DUF2156) AMIR_RS18045 PF00171 Aldehyde dehydrogenase family AMIR_RS18050 PF12146 Putative lysophospholipase AMIR_RS18055 PF00501 AMP-binding enzyme AMIR_RS18060 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS18065 PF03466 LysR substrate binding domain AMIR_RS18070 PF13577 SnoaL-like domain AMIR_RS18080 PF14430 AMIR_RS18080 AMIR_RS18085 PF07690 Major Facilitator Superfamily AMIR_RS18090 PF08241 Methyltransferase domain AMIR_RS18105 PF03796 DnaB-like helicase C terminal domain AMIR_RS18125 PF01435 Peptidase family M48 AMIR_RS18145 PF02467 AMIR_RS18145 AMIR_RS18165 PF13560 Helix-turn-helix domain AMIR_RS18170 PF16827 AMIR_RS18170 AMIR_RS18175 PF13560 Helix-turn-helix domain AMIR_RS18180 PF04149 AMIR_RS18180 AMIR_RS18190 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS18200 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS18205 PF00248 Aldo/keto reductase family AMIR_RS18210 PF02310 B12 binding domain AMIR_RS18230 PF13359 AMIR_RS18230 AMIR_RS18230 PF13613 AMIR_RS18230 AMIR_RS18245 PF00067 Cytochrome P450 AMIR_RS18260 PF00107 Zinc-binding dehydrogenase AMIR_RS18260 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS18265 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMIR_RS18275 PF00005 ABC transporter AMIR_RS18275 PF00664 ABC transporter transmembrane region AMIR_RS18280 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMIR_RS18285 PF00294 pfkB family carbohydrate kinase AMIR_RS18285 PF01467 Cytidylyltransferase AMIR_RS18290 PF02543 Carbamoyltransferase AMIR_RS18290 PF16861 AMIR_RS18290 AMIR_RS18295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMIR_RS18300 PF03621 MbtH-like protein AMIR_RS18305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS18310 PF00501 AMP-binding enzyme AMIR_RS18310 PF00550 Phosphopantetheine attachment site AMIR_RS18310 PF00881 Nitroreductase family AMIR_RS18310 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18315 PF00501 AMP-binding enzyme AMIR_RS18315 PF00550 Phosphopantetheine attachment site AMIR_RS18315 PF00668 Condensation domain AMIR_RS18315 PF08415 AMIR_RS18315 AMIR_RS18315 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18315 PF13745 HxxPF-repeated domain AMIR_RS18320 PF00733 Asparagine synthase AMIR_RS18320 PF13537 Glutamine amidotransferase domain AMIR_RS18325 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMIR_RS18330 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS18335 PF00550 Phosphopantetheine attachment site AMIR_RS18335 PF00668 Condensation domain AMIR_RS18345 PF00501 AMP-binding enzyme AMIR_RS18345 PF00550 Phosphopantetheine attachment site AMIR_RS18345 PF00668 Condensation domain AMIR_RS18345 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18345 PF13745 HxxPF-repeated domain AMIR_RS18350 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS18350 PF00550 Phosphopantetheine attachment site AMIR_RS18350 PF00698 Acyl transferase domain AMIR_RS18350 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS18350 PF08659 KR domain AMIR_RS18350 PF16197 AMIR_RS18350 AMIR_RS18355 PF00501 AMP-binding enzyme AMIR_RS18355 PF00550 Phosphopantetheine attachment site AMIR_RS18355 PF00668 Condensation domain AMIR_RS18355 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18355 PF13745 HxxPF-repeated domain AMIR_RS18360 PF00501 AMP-binding enzyme AMIR_RS18360 PF00550 Phosphopantetheine attachment site AMIR_RS18360 PF00668 Condensation domain AMIR_RS18360 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS18365 PF01804 Penicillin amidase AMIR_RS18370 PF00668 Condensation domain AMIR_RS18375 PF01638 HxlR-like helix-turn-helix AMIR_RS18395 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS18400 PF00067 Cytochrome P450 AMIR_RS18405 PF13459 4Fe-4S single cluster domain AMIR_RS18415 PF00005 ABC transporter AMIR_RS18415 PF00664 ABC transporter transmembrane region AMIR_RS18420 PF00072 Response regulator receiver domain AMIR_RS18420 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS18425 PF07730 Histidine kinase AMIR_RS18430 PF00144 Beta-lactamase AMIR_RS18435 PF01494 FAD binding domain AMIR_RS18440 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18445 PF13577 SnoaL-like domain AMIR_RS18450 PF01970 AMIR_RS18450 AMIR_RS18455 PF07331 AMIR_RS18455 AMIR_RS18460 PF03401 Tripartite tricarboxylate transporter family receptor AMIR_RS18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18465 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMIR_RS18465 PF17203 AMIR_RS18465 AMIR_RS18470 PF00072 Response regulator receiver domain AMIR_RS18475 PF03795 YCII-related domain AMIR_RS18480 PF00128 Alpha amylase, catalytic domain AMIR_RS18485 PF00296 Luciferase-like monooxygenase AMIR_RS18495 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18500 PF02558 Ketopantoate reductase PanE/ApbA AMIR_RS18505 PF13787 AMIR_RS18505 AMIR_RS18510 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18510 PF16859 AMIR_RS18510 AMIR_RS18515 PF04186 AMIR_RS18515 AMIR_RS18530 PF01544 CorA-like Mg2+ transporter protein AMIR_RS18535 PF00027 Cyclic nucleotide-binding domain AMIR_RS18535 PF13545 Crp-like helix-turn-helix domain AMIR_RS18565 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIR_RS18570 PF04443 AMIR_RS18570 AMIR_RS18575 PF05893 Acyl-CoA reductase (LuxC) AMIR_RS18580 PF00005 ABC transporter AMIR_RS18585 PF03600 Citrate transporter AMIR_RS18585 PF07158 AMIR_RS18585 AMIR_RS18590 PF03447 Homoserine dehydrogenase, NAD binding domain AMIR_RS18595 PF07005 Protein of unknown function, DUF1537 AMIR_RS18595 PF17042 AMIR_RS18595 AMIR_RS18600 PF00596 Class II Aldolase and Adducin N-terminal domain AMIR_RS18605 PF00455 AMIR_RS18605 AMIR_RS18605 PF08220 DeoR-like helix-turn-helix domain AMIR_RS18610 PF09250 Bifunctional DNA primase/polymerase, N-terminal AMIR_RS18615 PF01636 Phosphotransferase enzyme family AMIR_RS18620 PF01699 Sodium/calcium exchanger protein AMIR_RS18625 PF00989 PAS fold AMIR_RS18625 PF01590 GAF domain AMIR_RS18625 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS18625 PF08447 PAS fold AMIR_RS18625 PF13466 STAS domain AMIR_RS18625 PF13581 Histidine kinase-like ATPase domain AMIR_RS18630 PF00931 NB-ARC domain AMIR_RS18630 PF13176 Tetratricopeptide repeat AMIR_RS18630 PF13424 Tetratricopeptide repeat AMIR_RS18635 PF01740 STAS domain AMIR_RS18640 PF00072 Response regulator receiver domain AMIR_RS18640 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS18645 PF00072 Response regulator receiver domain AMIR_RS18645 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS18645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18650 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS18650 PF13581 Histidine kinase-like ATPase domain AMIR_RS18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS18660 PF01740 STAS domain AMIR_RS18665 PF01740 STAS domain AMIR_RS18665 PF14361 AMIR_RS18665 AMIR_RS18670 PF06314 Acetoacetate decarboxylase (ADC) AMIR_RS18675 PF00732 GMC oxidoreductase AMIR_RS18675 PF05199 GMC oxidoreductase AMIR_RS18680 PF00743 Flavin-binding monooxygenase-like AMIR_RS18685 PF12625 AMIR_RS18685 AMIR_RS18685 PF12833 Helix-turn-helix domain AMIR_RS18695 PF04616 Glycosyl hydrolases family 43 AMIR_RS18725 PF00005 ABC transporter AMIR_RS18725 PF00664 ABC transporter transmembrane region AMIR_RS18730 PF00005 ABC transporter AMIR_RS18730 PF00664 ABC transporter transmembrane region AMIR_RS18735 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS18735 PF16859 AMIR_RS18735 AMIR_RS18740 PF12695 Alpha/beta hydrolase family AMIR_RS18755 PF01814 Hemerythrin HHE cation binding domain AMIR_RS18755 PF04075 Domain of unknown function (DUF385) AMIR_RS18760 PF07070 AMIR_RS18760 AMIR_RS18765 PF13411 MerR HTH family regulatory protein AMIR_RS18770 PF14072 AMIR_RS18770 AMIR_RS18780 PF00069 Protein kinase domain AMIR_RS18785 PF00107 Zinc-binding dehydrogenase AMIR_RS18785 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS18790 PF00753 Metallo-beta-lactamase superfamily AMIR_RS18795 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS18800 PF13347 MFS/sugar transport protein AMIR_RS18805 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIR_RS18815 PF05977 Transmembrane secretion effector AMIR_RS18850 PF06983 3-demethylubiquinone-9 3-methyltransferase AMIR_RS18870 PF14246 AefR-like transcriptional repressor, C-terminal region AMIR_RS18880 PF08445 FR47-like protein AMIR_RS18920 PF00709 Adenylosuccinate synthetase AMIR_RS18930 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS18930 PF16499 AMIR_RS18930 AMIR_RS18940 PF00082 Subtilase family AMIR_RS18940 PF05922 Peptidase inhibitor I9 AMIR_RS18945 PF01638 HxlR-like helix-turn-helix AMIR_RS18950 PF02779 Transketolase, pyrimidine binding domain AMIR_RS18950 PF02780 Transketolase, C-terminal domain AMIR_RS18950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS18965 PF02082 Transcriptional regulator AMIR_RS18970 PF00042 Globin AMIR_RS18970 PF00175 Oxidoreductase NAD-binding domain AMIR_RS18975 PF12840 Helix-turn-helix domain AMIR_RS18980 PF03259 Roadblock/LC7 domain AMIR_RS18990 PF01593 Flavin containing amine oxidoreductase AMIR_RS18995 PF00348 Polyprenyl synthetase AMIR_RS19000 PF00494 Squalene/phytoene synthase AMIR_RS19005 PF00355 Rieske [2Fe-2S] domain AMIR_RS19010 PF01593 Flavin containing amine oxidoreductase AMIR_RS19015 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS19030 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19030 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS19035 PF01494 FAD binding domain AMIR_RS19040 PF00248 Aldo/keto reductase family AMIR_RS19055 PF05738 Cna protein B-type domain AMIR_RS19055 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS19060 PF01594 AMIR_RS19060 AMIR_RS19070 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AMIR_RS19075 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS19080 PF00501 AMP-binding enzyme AMIR_RS19080 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19085 PF02515 CoA-transferase family III AMIR_RS19090 PF08241 Methyltransferase domain AMIR_RS19095 PF00501 AMP-binding enzyme AMIR_RS19100 PF01593 Flavin containing amine oxidoreductase AMIR_RS19105 PF01040 UbiA prenyltransferase family AMIR_RS19110 PF13649 Methyltransferase domain AMIR_RS19115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS19120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIR_RS19125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS19130 PF01261 Xylose isomerase-like TIM barrel AMIR_RS19135 PF01546 Peptidase family M20/M25/M40 AMIR_RS19140 PF02615 Malate/L-lactate dehydrogenase AMIR_RS19145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS19155 PF00036 EF hand AMIR_RS19155 PF13499 EF-hand domain pair AMIR_RS19160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIR_RS19160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIR_RS19160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIR_RS19170 PF13602 Zinc-binding dehydrogenase AMIR_RS19175 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19180 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS19190 PF07971 Glycosyl hydrolase family 92 AMIR_RS19200 PF12697 Alpha/beta hydrolase family AMIR_RS19205 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS19205 PF13426 PAS domain AMIR_RS19210 PF13466 STAS domain AMIR_RS19225 PF07690 Major Facilitator Superfamily AMIR_RS19230 PF01252 AMIR_RS19230 AMIR_RS19240 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS19240 PF03704 Bacterial transcriptional activator domain AMIR_RS19245 PF04738 AMIR_RS19245 AMIR_RS19250 PF14028 AMIR_RS19250 AMIR_RS19260 PF02624 YcaO-like family AMIR_RS19270 PF00881 Nitroreductase family AMIR_RS19280 PF00756 Putative esterase AMIR_RS19285 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS19295 PF00072 Response regulator receiver domain AMIR_RS19295 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS19300 PF10002 AMIR_RS19300 AMIR_RS19310 PF00589 Phage integrase family AMIR_RS19325 PF03752 AMIR_RS19325 AMIR_RS19355 PF00668 Condensation domain AMIR_RS19355 PF16911 AMIR_RS19355 AMIR_RS19365 PF01526 AMIR_RS19365 AMIR_RS19370 PF00106 short chain dehydrogenase AMIR_RS19375 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19380 PF01471 Putative peptidoglycan binding domain AMIR_RS19385 PF00501 AMP-binding enzyme AMIR_RS19385 PF00550 Phosphopantetheine attachment site AMIR_RS19385 PF00668 Condensation domain AMIR_RS19385 PF00975 Thioesterase domain AMIR_RS19385 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19385 PF13745 HxxPF-repeated domain AMIR_RS19390 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS19390 PF00501 AMP-binding enzyme AMIR_RS19390 PF00550 Phosphopantetheine attachment site AMIR_RS19390 PF00668 Condensation domain AMIR_RS19390 PF00975 Thioesterase domain AMIR_RS19390 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS19390 PF08659 KR domain AMIR_RS19390 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS19390 PF13745 HxxPF-repeated domain AMIR_RS19390 PF16197 AMIR_RS19390 AMIR_RS19395 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS19400 PF00067 Cytochrome P450 AMIR_RS19410 PF00144 Beta-lactamase AMIR_RS19415 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS19415 PF04101 Glycosyltransferase family 28 C-terminal domain AMIR_RS19425 PF13460 NADH(P)-binding AMIR_RS19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS19430 PF03466 LysR substrate binding domain AMIR_RS19440 PF07883 Cupin domain AMIR_RS19445 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS19445 PF13602 Zinc-binding dehydrogenase AMIR_RS19450 PF13560 Helix-turn-helix domain AMIR_RS19465 PF00704 Glycosyl hydrolases family 18 AMIR_RS19475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMIR_RS19480 PF01032 FecCD transport family AMIR_RS19485 PF01497 Periplasmic binding protein AMIR_RS19490 PF13649 Methyltransferase domain AMIR_RS19495 PF00005 ABC transporter AMIR_RS19500 PF01032 FecCD transport family AMIR_RS19505 PF01497 Periplasmic binding protein AMIR_RS19510 PF07690 Major Facilitator Superfamily AMIR_RS19515 PF10100 AMIR_RS19515 AMIR_RS19540 PF14518 Iron-containing redox enzyme AMIR_RS19545 PF02543 Carbamoyltransferase AMIR_RS19545 PF16861 AMIR_RS19545 AMIR_RS19555 PF04616 Glycosyl hydrolases family 43 AMIR_RS19560 PF04616 Glycosyl hydrolases family 43 AMIR_RS19565 PF13340 AMIR_RS19565 AMIR_RS19570 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS19570 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIR_RS19575 PF01266 FAD dependent oxidoreductase AMIR_RS19580 PF00248 Aldo/keto reductase family AMIR_RS19590 PF02543 Carbamoyltransferase AMIR_RS19590 PF16861 AMIR_RS19590 AMIR_RS19595 PF13649 Methyltransferase domain AMIR_RS19605 PF00561 alpha/beta hydrolase fold AMIR_RS19620 PF01872 RibD C-terminal domain AMIR_RS19625 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS19630 PF12840 Helix-turn-helix domain AMIR_RS19640 PF07690 Major Facilitator Superfamily AMIR_RS19645 PF04616 Glycosyl hydrolases family 43 AMIR_RS19645 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS19650 PF00248 Aldo/keto reductase family AMIR_RS19655 PF13466 STAS domain AMIR_RS19660 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS19665 PF07690 Major Facilitator Superfamily AMIR_RS19670 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19675 PF14011 EspG family AMIR_RS19690 PF13466 STAS domain AMIR_RS19695 PF00072 Response regulator receiver domain AMIR_RS19695 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS19695 PF00989 PAS fold AMIR_RS19695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS19695 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS19695 PF08448 PAS fold AMIR_RS19695 PF13185 GAF domain AMIR_RS19695 PF13581 Histidine kinase-like ATPase domain AMIR_RS19700 PF13581 Histidine kinase-like ATPase domain AMIR_RS19710 PF00027 Cyclic nucleotide-binding domain AMIR_RS19710 PF13545 Crp-like helix-turn-helix domain AMIR_RS19715 PF00544 Pectate lyase AMIR_RS19720 PF00553 Cellulose binding domain AMIR_RS19720 PF10503 Esterase PHB depolymerase AMIR_RS19725 PF13354 Beta-lactamase enzyme family AMIR_RS19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS19735 PF13354 Beta-lactamase enzyme family AMIR_RS19740 PF13560 Helix-turn-helix domain AMIR_RS19745 PF00107 Zinc-binding dehydrogenase AMIR_RS19745 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS19760 PF03779 AMIR_RS19760 AMIR_RS19770 PF13560 Helix-turn-helix domain AMIR_RS19780 PF13360 PQQ-like domain AMIR_RS19785 PF01494 FAD binding domain AMIR_RS19790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS19795 PF00717 Peptidase S24-like AMIR_RS19795 PF01726 LexA DNA binding domain AMIR_RS19800 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19805 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS19810 PF17032 AMIR_RS19810 AMIR_RS19815 PF07690 Major Facilitator Superfamily AMIR_RS19820 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19825 PF00925 GTP cyclohydrolase II AMIR_RS19830 PF12802 MarR family AMIR_RS19835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS19835 PF01872 RibD C-terminal domain AMIR_RS19840 PF01546 Peptidase family M20/M25/M40 AMIR_RS19840 PF07687 Peptidase dimerisation domain AMIR_RS19845 PF13646 HEAT repeats AMIR_RS19855 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS19860 PF01670 Glycosyl hydrolase family 12 AMIR_RS19870 PF13409 Glutathione S-transferase, N-terminal domain AMIR_RS19870 PF13410 Glutathione S-transferase, C-terminal domain AMIR_RS19875 PF13411 MerR HTH family regulatory protein AMIR_RS19880 PF01074 Glycosyl hydrolases family 38 N-terminal domain AMIR_RS19880 PF07748 Glycosyl hydrolases family 38 C-terminal domain AMIR_RS19880 PF09261 Alpha mannosidase, middle domain AMIR_RS19890 PF13460 NADH(P)-binding AMIR_RS19895 PF06271 AMIR_RS19895 AMIR_RS19900 PF00561 alpha/beta hydrolase fold AMIR_RS19900 PF08386 TAP-like protein AMIR_RS19905 PF13671 AAA domain AMIR_RS19910 PF06267 Family of unknown function (DUF1028) AMIR_RS19925 PF07730 Histidine kinase AMIR_RS19930 PF00072 Response regulator receiver domain AMIR_RS19930 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS19940 PF00975 Thioesterase domain AMIR_RS19950 PF01494 FAD binding domain AMIR_RS19955 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS19955 PF16859 AMIR_RS19955 AMIR_RS19960 PF01261 Xylose isomerase-like TIM barrel AMIR_RS19965 PF06187 Protein of unknown function (DUF993) AMIR_RS19970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS19970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS19985 PF00080 Copper/zinc superoxide dismutase (SODC) AMIR_RS19990 PF08713 DNA alkylation repair enzyme AMIR_RS19995 PF00561 alpha/beta hydrolase fold AMIR_RS20000 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20005 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMIR_RS20005 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMIR_RS20010 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS20020 PF13460 NADH(P)-binding AMIR_RS20025 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS20025 PF00550 Phosphopantetheine attachment site AMIR_RS20025 PF00698 Acyl transferase domain AMIR_RS20025 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS20025 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS20025 PF08659 KR domain AMIR_RS20025 PF14765 Polyketide synthase dehydratase AMIR_RS20025 PF16197 AMIR_RS20025 AMIR_RS20030 PF00296 Luciferase-like monooxygenase AMIR_RS20035 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS20060 PF10824 Protein of unknown function (DUF2580) AMIR_RS20070 PF00069 Protein kinase domain AMIR_RS20075 PF13205 Bacterial Ig-like domain AMIR_RS20075 PF13313 AMIR_RS20075 AMIR_RS20080 PF03984 AMIR_RS20080 AMIR_RS20085 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20085 PF16483 AMIR_RS20085 AMIR_RS20090 PF00501 AMP-binding enzyme AMIR_RS20090 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20095 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS20100 PF01070 FMN-dependent dehydrogenase AMIR_RS20105 PF00067 Cytochrome P450 AMIR_RS20110 PF00999 Sodium/hydrogen exchanger family AMIR_RS20120 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20120 PF00672 HAMP domain AMIR_RS20120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20135 PF12688 Tetratrico peptide repeat AMIR_RS20145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS20145 PF13378 Enolase C-terminal domain-like AMIR_RS20150 PF03747 ADP-ribosylglycohydrolase AMIR_RS20155 PF00092 von Willebrand factor type A domain AMIR_RS20155 PF03160 Calx-beta domain AMIR_RS20160 PF00005 ABC transporter AMIR_RS20160 PF00664 ABC transporter transmembrane region AMIR_RS20165 PF00005 ABC transporter AMIR_RS20165 PF00664 ABC transporter transmembrane region AMIR_RS20170 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20170 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS20175 PF02687 AMIR_RS20175 AMIR_RS20180 PF00005 ABC transporter AMIR_RS20190 PF00072 Response regulator receiver domain AMIR_RS20190 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS20195 PF07730 Histidine kinase AMIR_RS20200 PF12680 SnoaL-like domain AMIR_RS20205 PF08279 HTH domain AMIR_RS20205 PF13280 AMIR_RS20205 AMIR_RS20215 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20215 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS20220 PF07366 SnoaL-like polyketide cyclase AMIR_RS20225 PF00753 Metallo-beta-lactamase superfamily AMIR_RS20230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS20230 PF07497 Rho termination factor, RNA-binding domain AMIR_RS20255 PF13420 Acetyltransferase (GNAT) domain AMIR_RS20260 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20270 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20270 PF00672 HAMP domain AMIR_RS20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20275 PF00072 Response regulator receiver domain AMIR_RS20275 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20280 PF01471 Putative peptidoglycan binding domain AMIR_RS20285 PF00005 ABC transporter AMIR_RS20290 PF02687 AMIR_RS20290 AMIR_RS20290 PF12704 MacB-like periplasmic core domain AMIR_RS20305 PF00266 Aminotransferase class-V AMIR_RS20310 PF00732 GMC oxidoreductase AMIR_RS20310 PF05199 GMC oxidoreductase AMIR_RS20315 PF00891 O-methyltransferase AMIR_RS20315 PF16864 AMIR_RS20315 AMIR_RS20320 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS20330 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS20335 PF01613 Flavin reductase like domain AMIR_RS20340 PF13279 Thioesterase-like superfamily AMIR_RS20345 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS20345 PF00698 Acyl transferase domain AMIR_RS20345 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS20345 PF08659 KR domain AMIR_RS20345 PF14765 Polyketide synthase dehydratase AMIR_RS20345 PF16197 AMIR_RS20345 AMIR_RS20350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS20350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS20355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS20355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS20360 PF07690 Major Facilitator Superfamily AMIR_RS20365 PF01638 HxlR-like helix-turn-helix AMIR_RS20370 PF12697 Alpha/beta hydrolase family AMIR_RS20375 PF09594 AMIR_RS20375 AMIR_RS20380 PF00535 Glycosyl transferase family 2 AMIR_RS20385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS20385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS20390 PF06441 Epoxide hydrolase N terminus AMIR_RS20395 PF05988 AMIR_RS20395 AMIR_RS20400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS20400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS20410 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS20415 PF03109 AMIR_RS20415 AMIR_RS20420 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS20425 PF00106 short chain dehydrogenase AMIR_RS20430 PF00732 GMC oxidoreductase AMIR_RS20430 PF05199 GMC oxidoreductase AMIR_RS20435 PF08012 AMIR_RS20435 AMIR_RS20440 PF00067 Cytochrome P450 AMIR_RS20445 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS20450 PF12833 Helix-turn-helix domain AMIR_RS20455 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20455 PF13305 WHG domain AMIR_RS20460 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS20460 PF13602 Zinc-binding dehydrogenase AMIR_RS20465 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS20470 PF01613 Flavin reductase like domain AMIR_RS20475 PF00698 Acyl transferase domain AMIR_RS20485 PF07593 AMIR_RS20485 AMIR_RS20490 PF00106 short chain dehydrogenase AMIR_RS20495 PF05988 AMIR_RS20495 AMIR_RS20500 PF00501 AMP-binding enzyme AMIR_RS20500 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS20505 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS20510 PF07593 AMIR_RS20510 AMIR_RS20510 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella AMIR_RS20520 PF12833 Helix-turn-helix domain AMIR_RS20535 PF13454 FAD-NAD(P)-binding AMIR_RS20540 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS20540 PF02896 PEP-utilising enzyme, TIM barrel domain AMIR_RS20545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIR_RS20550 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS20550 PF01799 [2Fe-2S] binding domain AMIR_RS20555 PF00176 SNF2 family N-terminal domain AMIR_RS20555 PF00271 Helicase conserved C-terminal domain AMIR_RS20560 PF00176 SNF2 family N-terminal domain AMIR_RS20560 PF00271 Helicase conserved C-terminal domain AMIR_RS20560 PF13020 AMIR_RS20560 AMIR_RS20570 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS20570 PF13377 Periplasmic binding protein-like domain AMIR_RS20575 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS20580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS20580 PF13378 Enolase C-terminal domain-like AMIR_RS20590 PF00553 Cellulose binding domain AMIR_RS20595 PF01494 FAD binding domain AMIR_RS20600 PF08332 Calcium/calmodulin dependent protein kinase II Association AMIR_RS20605 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS20605 PF00672 HAMP domain AMIR_RS20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS20610 PF00072 Response regulator receiver domain AMIR_RS20610 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS20640 PF02678 Pirin AMIR_RS20640 PF05726 Pirin C-terminal cupin domain AMIR_RS20645 PF13354 Beta-lactamase enzyme family AMIR_RS20655 PF00561 alpha/beta hydrolase fold AMIR_RS20660 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20665 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20670 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20675 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS20675 PF00553 Cellulose binding domain AMIR_RS20685 PF05099 Tellurite resistance protein TerB AMIR_RS20685 PF13208 AMIR_RS20685 AMIR_RS20690 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS20710 PF01625 Peptide methionine sulfoxide reductase AMIR_RS20715 PF00285 Citrate synthase AMIR_RS20720 PF02515 CoA-transferase family III AMIR_RS20725 PF01970 AMIR_RS20725 AMIR_RS20730 PF07331 AMIR_RS20730 AMIR_RS20735 PF03401 Tripartite tricarboxylate transporter family receptor AMIR_RS20740 PF01614 Bacterial transcriptional regulator AMIR_RS20740 PF09339 IclR helix-turn-helix domain AMIR_RS20745 PF03737 Demethylmenaquinone methyltransferase AMIR_RS20750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS20750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS20760 PF06675 AMIR_RS20760 AMIR_RS20770 PF07302 AMIR_RS20770 AMIR_RS20775 PF03169 AMIR_RS20775 AMIR_RS20780 PF01614 Bacterial transcriptional regulator AMIR_RS20780 PF09339 IclR helix-turn-helix domain AMIR_RS20785 PF03575 Peptidase family S51 AMIR_RS20790 PF00069 Protein kinase domain AMIR_RS20790 PF00553 Cellulose binding domain AMIR_RS20800 PF12079 AMIR_RS20800 AMIR_RS20805 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS20805 PF03211 Pectate lyase AMIR_RS20810 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS20810 PF13602 Zinc-binding dehydrogenase AMIR_RS20815 PF01047 MarR family AMIR_RS20820 PF01266 FAD dependent oxidoreductase AMIR_RS20825 PF00557 Metallopeptidase family M24 AMIR_RS20835 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMIR_RS20835 PF13424 Tetratricopeptide repeat AMIR_RS20840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS20840 PF00672 HAMP domain AMIR_RS20845 PF00795 Carbon-nitrogen hydrolase AMIR_RS20850 PF00733 Asparagine synthase AMIR_RS20855 PF00106 short chain dehydrogenase AMIR_RS20860 PF13560 Helix-turn-helix domain AMIR_RS20865 PF00561 alpha/beta hydrolase fold AMIR_RS20870 PF13463 Winged helix DNA-binding domain AMIR_RS20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS20875 PF00672 HAMP domain AMIR_RS20880 PF01475 Ferric uptake regulator family AMIR_RS20885 PF00141 Peroxidase AMIR_RS20890 PF00082 Subtilase family AMIR_RS20895 PF00082 Subtilase family AMIR_RS20900 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS20905 PF01095 Pectinesterase AMIR_RS20905 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS20910 PF00544 Pectate lyase AMIR_RS20910 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS20920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS20930 PF01494 FAD binding domain AMIR_RS20935 PF00202 Aminotransferase class-III AMIR_RS20945 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS20950 PF01266 FAD dependent oxidoreductase AMIR_RS20955 PF07883 Cupin domain AMIR_RS20955 PF09334 tRNA synthetases class I (M) AMIR_RS20960 PF11695 AMIR_RS20960 AMIR_RS20965 PF00892 EamA-like transporter family AMIR_RS20970 PF01494 FAD binding domain AMIR_RS20975 PF00581 Rhodanese-like domain AMIR_RS20980 PF00501 AMP-binding enzyme AMIR_RS20985 PF07859 alpha/beta hydrolase fold AMIR_RS20990 PF00501 AMP-binding enzyme AMIR_RS20995 PF00583 Acetyltransferase (GNAT) family AMIR_RS21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21005 PF03466 LysR substrate binding domain AMIR_RS21010 PF00459 Inositol monophosphatase family AMIR_RS21015 PF13460 NADH(P)-binding AMIR_RS21025 PF10824 Protein of unknown function (DUF2580) AMIR_RS21040 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS21050 PF12840 Helix-turn-helix domain AMIR_RS21055 PF00916 AMIR_RS21055 AMIR_RS21055 PF01740 STAS domain AMIR_RS21060 PF00376 MerR family regulatory protein AMIR_RS21070 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21075 PF16571 AMIR_RS21075 AMIR_RS21080 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS21085 PF04072 Leucine carboxyl methyltransferase AMIR_RS21090 PF00067 Cytochrome P450 AMIR_RS21095 PF00270 DEAD/DEAH box helicase AMIR_RS21095 PF00271 Helicase conserved C-terminal domain AMIR_RS21095 PF16124 AMIR_RS21095 AMIR_RS21100 PF00457 Glycosyl hydrolases family 11 AMIR_RS21105 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMIR_RS21105 PF00364 Biotin-requiring enzyme AMIR_RS21105 PF01039 Carboxyl transferase domain AMIR_RS21105 PF02785 Biotin carboxylase C-terminal domain AMIR_RS21105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS21105 PF08326 AMIR_RS21105 AMIR_RS21110 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21120 PF01547 Bacterial extracellular solute-binding protein AMIR_RS21130 PF00248 Aldo/keto reductase family AMIR_RS21135 PF13560 Helix-turn-helix domain AMIR_RS21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21145 PF03466 LysR substrate binding domain AMIR_RS21150 PF00106 short chain dehydrogenase AMIR_RS21160 PF13203 AMIR_RS21160 AMIR_RS21165 PF07728 AAA domain (dynein-related subfamily) AMIR_RS21170 PF00106 short chain dehydrogenase AMIR_RS21170 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS21195 PF13474 SnoaL-like domain AMIR_RS21200 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS21200 PF12464 Maltose acetyltransferase AMIR_RS21215 PF07478 D-ala D-ala ligase C-terminus AMIR_RS21225 PF01596 O-methyltransferase AMIR_RS21230 PF01761 3-dehydroquinate synthase AMIR_RS21235 PF00072 Response regulator receiver domain AMIR_RS21235 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS21240 PF07730 Histidine kinase AMIR_RS21245 PF00144 Beta-lactamase AMIR_RS21255 PF13569 AMIR_RS21255 AMIR_RS21265 PF01042 Endoribonuclease L-PSP AMIR_RS21270 PF01987 Mitochondrial biogenesis AIM24 AMIR_RS21280 PF12697 Alpha/beta hydrolase family AMIR_RS21285 PF12802 MarR family AMIR_RS21290 PF10067 AMIR_RS21290 AMIR_RS21295 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS21295 PF13191 AAA ATPase domain AMIR_RS21305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS21310 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21315 PF01636 Phosphotransferase enzyme family AMIR_RS21320 PF01554 MatE AMIR_RS21325 PF12146 Putative lysophospholipase AMIR_RS21330 PF08223 PaaX-like protein C-terminal domain AMIR_RS21335 PF01022 Bacterial regulatory protein, arsR family AMIR_RS21340 PF00122 E1-E2 ATPase AMIR_RS21340 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS21345 PF07690 Major Facilitator Superfamily AMIR_RS21350 PF01022 Bacterial regulatory protein, arsR family AMIR_RS21355 PF03239 AMIR_RS21355 AMIR_RS21360 PF09375 Imelysin AMIR_RS21360 PF13473 Cupredoxin-like domain AMIR_RS21365 PF04261 Dyp-type peroxidase family AMIR_RS21370 PF03965 Penicillinase repressor AMIR_RS21375 PF07336 Protein of unknown function (DUF1470) AMIR_RS21375 PF11706 CGNR zinc finger AMIR_RS21380 PF06441 Epoxide hydrolase N terminus AMIR_RS21385 PF00005 ABC transporter AMIR_RS21390 PF01032 FecCD transport family AMIR_RS21395 PF01032 FecCD transport family AMIR_RS21400 PF01497 Periplasmic binding protein AMIR_RS21405 PF02983 Alpha-lytic protease prodomain AMIR_RS21415 PF03861 ANTAR domain AMIR_RS21415 PF13185 GAF domain AMIR_RS21420 PF01276 Orn/Lys/Arg decarboxylase, major domain AMIR_RS21420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMIR_RS21430 PF01936 NYN domain AMIR_RS21450 PF00581 Rhodanese-like domain AMIR_RS21455 PF01565 FAD binding domain AMIR_RS21455 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS21465 PF13569 AMIR_RS21465 AMIR_RS21470 PF01613 Flavin reductase like domain AMIR_RS21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS21475 PF03466 LysR substrate binding domain AMIR_RS21480 PF00296 Luciferase-like monooxygenase AMIR_RS21485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS21485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS21490 PF01965 DJ-1/PfpI family AMIR_RS21495 PF01965 DJ-1/PfpI family AMIR_RS21495 PF12833 Helix-turn-helix domain AMIR_RS21500 PF12833 Helix-turn-helix domain AMIR_RS21515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS21520 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21525 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS21530 PF00005 ABC transporter AMIR_RS21530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS21535 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS21540 PF00720 Subtilisin inhibitor-like AMIR_RS21560 PF13560 Helix-turn-helix domain AMIR_RS21570 PF01374 Glycosyl hydrolase family 46 AMIR_RS21575 PF00072 Response regulator receiver domain AMIR_RS21580 PF00890 FAD binding domain AMIR_RS21585 PF01037 AsnC family AMIR_RS21585 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS21595 PF03741 AMIR_RS21595 AMIR_RS21600 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21605 PF01494 FAD binding domain AMIR_RS21610 PF07690 Major Facilitator Superfamily AMIR_RS21615 PF02861 Clp amino terminal domain AMIR_RS21620 PF00999 Sodium/hydrogen exchanger family AMIR_RS21635 PF07690 Major Facilitator Superfamily AMIR_RS21640 PF12802 MarR family AMIR_RS21645 PF05729 NACHT domain AMIR_RS21650 PF01037 AsnC family AMIR_RS21650 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS21655 PF02588 AMIR_RS21655 AMIR_RS21665 PF00072 Response regulator receiver domain AMIR_RS21665 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS21670 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS21675 PF00221 Aromatic amino acid lyase AMIR_RS21680 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS21685 PF00501 AMP-binding enzyme AMIR_RS21685 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS21690 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21690 PF00550 Phosphopantetheine attachment site AMIR_RS21690 PF00698 Acyl transferase domain AMIR_RS21690 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS21690 PF08659 KR domain AMIR_RS21690 PF08990 Erythronolide synthase docking AMIR_RS21690 PF16197 AMIR_RS21690 AMIR_RS21695 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21695 PF00698 Acyl transferase domain AMIR_RS21695 PF08990 Erythronolide synthase docking AMIR_RS21695 PF16197 AMIR_RS21695 AMIR_RS21700 PF01494 FAD binding domain AMIR_RS21705 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS21705 PF00550 Phosphopantetheine attachment site AMIR_RS21705 PF00698 Acyl transferase domain AMIR_RS21705 PF08659 KR domain AMIR_RS21715 PF06722 Protein of unknown function (DUF1205) AMIR_RS21720 PF13649 Methyltransferase domain AMIR_RS21740 PF03060 Nitronate monooxygenase AMIR_RS21745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS21745 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS21745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS21750 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21755 PF00501 AMP-binding enzyme AMIR_RS21760 PF00108 Thiolase, N-terminal domain AMIR_RS21760 PF02803 Thiolase, C-terminal domain AMIR_RS21765 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS21765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS21765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS21770 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21775 PF09995 AMIR_RS21775 AMIR_RS21780 PF09995 AMIR_RS21780 AMIR_RS21785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIR_RS21790 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS21790 PF01799 [2Fe-2S] binding domain AMIR_RS21795 PF13411 MerR HTH family regulatory protein AMIR_RS21800 PF00348 Polyprenyl synthetase AMIR_RS21805 PF01040 UbiA prenyltransferase family AMIR_RS21810 PF01494 FAD binding domain AMIR_RS21815 PF00891 O-methyltransferase AMIR_RS21820 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIR_RS21825 PF00067 Cytochrome P450 AMIR_RS21830 PF00432 Prenyltransferase and squalene oxidase repeat AMIR_RS21830 PF13243 Prenyltransferase-like AMIR_RS21830 PF13249 Prenyltransferase-like AMIR_RS21835 PF00155 Aminotransferase class I and II AMIR_RS21840 PF07690 Major Facilitator Superfamily AMIR_RS21865 PF00188 Cysteine-rich secretory protein family AMIR_RS21870 PF12833 Helix-turn-helix domain AMIR_RS21875 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS21880 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21880 PF16925 AMIR_RS21880 AMIR_RS21885 PF01965 DJ-1/PfpI family AMIR_RS21895 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS21900 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS21905 PF13411 MerR HTH family regulatory protein AMIR_RS21915 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS21915 PF07729 FCD domain AMIR_RS21920 PF01161 Phosphatidylethanolamine-binding protein AMIR_RS21925 PF13569 AMIR_RS21925 AMIR_RS21930 PF12833 Helix-turn-helix domain AMIR_RS21935 PF13466 STAS domain AMIR_RS21940 PF00534 Glycosyl transferases group 1 AMIR_RS21940 PF13439 Glycosyltransferase Family 4 AMIR_RS21955 PF13449 Esterase-like activity of phytase AMIR_RS21970 PF01475 Ferric uptake regulator family AMIR_RS21975 PF01783 Ribosomal L32p protein family AMIR_RS21980 PF01197 Ribosomal protein L31 AMIR_RS21985 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS21985 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS21990 PF00199 Catalase AMIR_RS21990 PF06628 Catalase-related immune-responsive AMIR_RS21995 PF00117 Glutamine amidotransferase class-I AMIR_RS22000 PF03473 MOSC domain AMIR_RS22005 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS22010 PF12802 MarR family AMIR_RS22015 PF12833 Helix-turn-helix domain AMIR_RS22015 PF12852 Cupin AMIR_RS22020 PF00107 Zinc-binding dehydrogenase AMIR_RS22025 PF12833 Helix-turn-helix domain AMIR_RS22025 PF12852 Cupin AMIR_RS22030 PF13602 Zinc-binding dehydrogenase AMIR_RS22035 PF13672 Protein phosphatase 2C AMIR_RS22040 PF00801 PKD domain AMIR_RS22045 PF05368 NmrA-like family AMIR_RS22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS22050 PF03466 LysR substrate binding domain AMIR_RS22055 PF07876 Stress responsive A/B Barrel Domain AMIR_RS22060 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22060 PF13602 Zinc-binding dehydrogenase AMIR_RS22070 PF00072 Response regulator receiver domain AMIR_RS22070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS22075 PF07730 Histidine kinase AMIR_RS22090 PF01593 Flavin containing amine oxidoreductase AMIR_RS22095 PF00950 AMIR_RS22095 AMIR_RS22100 PF00005 ABC transporter AMIR_RS22105 PF01297 Periplasmic solute binding protein family AMIR_RS22110 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22110 PF00550 Phosphopantetheine attachment site AMIR_RS22110 PF00698 Acyl transferase domain AMIR_RS22110 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22110 PF07993 Male sterility protein AMIR_RS22110 PF08659 KR domain AMIR_RS22110 PF08990 Erythronolide synthase docking AMIR_RS22110 PF16197 AMIR_RS22110 AMIR_RS22115 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22115 PF00550 Phosphopantetheine attachment site AMIR_RS22115 PF00698 Acyl transferase domain AMIR_RS22115 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22115 PF08659 KR domain AMIR_RS22115 PF08990 Erythronolide synthase docking AMIR_RS22115 PF14765 Polyketide synthase dehydratase AMIR_RS22115 PF16197 AMIR_RS22115 AMIR_RS22120 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22120 PF00550 Phosphopantetheine attachment site AMIR_RS22120 PF00698 Acyl transferase domain AMIR_RS22120 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22120 PF08659 KR domain AMIR_RS22120 PF08990 Erythronolide synthase docking AMIR_RS22120 PF14765 Polyketide synthase dehydratase AMIR_RS22120 PF16197 AMIR_RS22120 AMIR_RS22125 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22125 PF00550 Phosphopantetheine attachment site AMIR_RS22125 PF00698 Acyl transferase domain AMIR_RS22125 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22125 PF08659 KR domain AMIR_RS22125 PF14765 Polyketide synthase dehydratase AMIR_RS22125 PF16197 AMIR_RS22125 AMIR_RS22130 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS22135 PF00202 Aminotransferase class-III AMIR_RS22140 PF14534 Domain of unknown function (DUF4440) AMIR_RS22145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS22145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS22150 PF01613 Flavin reductase like domain AMIR_RS22160 PF00268 Ribonucleotide reductase, small chain AMIR_RS22165 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22165 PF03704 Bacterial transcriptional activator domain AMIR_RS22175 PF01593 Flavin containing amine oxidoreductase AMIR_RS22180 PF13460 NADH(P)-binding AMIR_RS22185 PF12833 Helix-turn-helix domain AMIR_RS22185 PF12852 Cupin AMIR_RS22190 PF01925 AMIR_RS22190 AMIR_RS22200 PF13560 Helix-turn-helix domain AMIR_RS22205 PF00106 short chain dehydrogenase AMIR_RS22210 PF14079 AMIR_RS22210 AMIR_RS22220 PF12697 Alpha/beta hydrolase family AMIR_RS22225 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS22230 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS22235 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS22235 PF00175 Oxidoreductase NAD-binding domain AMIR_RS22235 PF00970 Oxidoreductase FAD-binding domain AMIR_RS22235 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS22240 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS22245 PF08685 AMIR_RS22245 AMIR_RS22250 PF00501 AMP-binding enzyme AMIR_RS22260 PF03992 Antibiotic biosynthesis monooxygenase AMIR_RS22265 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS22270 PF00881 Nitroreductase family AMIR_RS22280 PF14025 AMIR_RS22280 AMIR_RS22285 PF00069 Protein kinase domain AMIR_RS22295 PF00107 Zinc-binding dehydrogenase AMIR_RS22295 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22300 PF03200 Mannosyl oligosaccharide glucosidase AMIR_RS22305 PF07690 Major Facilitator Superfamily AMIR_RS22310 PF00480 ROK family AMIR_RS22320 PF12680 SnoaL-like domain AMIR_RS22325 PF04055 Radical SAM superfamily AMIR_RS22330 PF00501 AMP-binding enzyme AMIR_RS22330 PF00550 Phosphopantetheine attachment site AMIR_RS22330 PF00668 Condensation domain AMIR_RS22330 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22330 PF13745 HxxPF-repeated domain AMIR_RS22335 PF01494 FAD binding domain AMIR_RS22340 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS22345 PF04299 Putative FMN-binding domain AMIR_RS22350 PF00501 AMP-binding enzyme AMIR_RS22350 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22355 PF05977 Transmembrane secretion effector AMIR_RS22360 PF02543 Carbamoyltransferase AMIR_RS22360 PF16861 AMIR_RS22360 AMIR_RS22365 PF00975 Thioesterase domain AMIR_RS22370 PF00067 Cytochrome P450 AMIR_RS22375 PF00501 AMP-binding enzyme AMIR_RS22375 PF00550 Phosphopantetheine attachment site AMIR_RS22375 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22385 PF00288 GHMP kinases N terminal domain AMIR_RS22390 PF00501 AMP-binding enzyme AMIR_RS22390 PF00550 Phosphopantetheine attachment site AMIR_RS22390 PF00668 Condensation domain AMIR_RS22390 PF00975 Thioesterase domain AMIR_RS22390 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22390 PF13745 HxxPF-repeated domain AMIR_RS22395 PF01212 Beta-eliminating lyase AMIR_RS22400 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS22400 PF13535 ATP-grasp domain AMIR_RS22405 PF00206 Lyase AMIR_RS22410 PF03621 MbtH-like protein AMIR_RS22415 PF00501 AMP-binding enzyme AMIR_RS22415 PF00550 Phosphopantetheine attachment site AMIR_RS22415 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22420 PF16571 AMIR_RS22420 AMIR_RS22425 PF00668 Condensation domain AMIR_RS22425 PF13745 HxxPF-repeated domain AMIR_RS22430 PF00501 AMP-binding enzyme AMIR_RS22430 PF00550 Phosphopantetheine attachment site AMIR_RS22430 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22440 PF13245 Part of AAA domain AMIR_RS22440 PF13538 UvrD-like helicase C-terminal domain AMIR_RS22445 PF03176 MMPL family AMIR_RS22450 PF07730 Histidine kinase AMIR_RS22455 PF00072 Response regulator receiver domain AMIR_RS22455 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS22460 PF04892 AMIR_RS22460 AMIR_RS22465 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS22465 PF00672 HAMP domain AMIR_RS22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS22470 PF00072 Response regulator receiver domain AMIR_RS22470 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22475 PF00089 Trypsin AMIR_RS22475 PF02983 Alpha-lytic protease prodomain AMIR_RS22480 PF00553 Cellulose binding domain AMIR_RS22480 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS22485 PF00934 PE family AMIR_RS22490 PF12079 AMIR_RS22490 AMIR_RS22500 PF14011 EspG family AMIR_RS22505 PF00561 alpha/beta hydrolase fold AMIR_RS22510 PF00089 Trypsin AMIR_RS22515 PF03724 META domain AMIR_RS22530 PF10824 Protein of unknown function (DUF2580) AMIR_RS22535 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS22550 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS22550 PF08448 PAS fold AMIR_RS22555 PF01636 Phosphotransferase enzyme family AMIR_RS22565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS22575 PF00550 Phosphopantetheine attachment site AMIR_RS22580 PF04055 Radical SAM superfamily AMIR_RS22580 PF13186 Iron-sulfur cluster-binding domain AMIR_RS22580 PF13394 4Fe-4S single cluster domain AMIR_RS22585 PF00668 Condensation domain AMIR_RS22615 PF03527 AMIR_RS22615 AMIR_RS22615 PF05593 AMIR_RS22615 AMIR_RS22615 PF15657 AMIR_RS22615 AMIR_RS22630 PF00589 Phage integrase family AMIR_RS22635 PF13358 DDE superfamily endonuclease AMIR_RS22640 PF00089 Trypsin AMIR_RS22640 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella AMIR_RS22645 PF03752 AMIR_RS22645 AMIR_RS22645 PF15607 AMIR_RS22645 AMIR_RS22655 PF04796 AMIR_RS22655 AMIR_RS22660 PF13358 DDE superfamily endonuclease AMIR_RS22660 PF13565 AMIR_RS22660 AMIR_RS22720 PF10901 AMIR_RS22720 AMIR_RS22735 PF13560 Helix-turn-helix domain AMIR_RS22750 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS22760 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS22775 PF13359 AMIR_RS22775 AMIR_RS22775 PF13613 AMIR_RS22775 AMIR_RS22810 PF13302 Acetyltransferase (GNAT) domain AMIR_RS22815 PF13649 Methyltransferase domain AMIR_RS22820 PF00501 AMP-binding enzyme AMIR_RS22820 PF00550 Phosphopantetheine attachment site AMIR_RS22820 PF00668 Condensation domain AMIR_RS22820 PF00975 Thioesterase domain AMIR_RS22820 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22825 PF00501 AMP-binding enzyme AMIR_RS22825 PF00550 Phosphopantetheine attachment site AMIR_RS22825 PF00668 Condensation domain AMIR_RS22825 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22825 PF13745 HxxPF-repeated domain AMIR_RS22830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS22830 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AMIR_RS22835 PF00155 Aminotransferase class I and II AMIR_RS22840 PF07690 Major Facilitator Superfamily AMIR_RS22845 PF03621 MbtH-like protein AMIR_RS22850 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS22855 PF10503 Esterase PHB depolymerase AMIR_RS22860 PF00067 Cytochrome P450 AMIR_RS22865 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS22865 PF00931 NB-ARC domain AMIR_RS22865 PF03704 Bacterial transcriptional activator domain AMIR_RS22870 PF01070 FMN-dependent dehydrogenase AMIR_RS22875 PF00067 Cytochrome P450 AMIR_RS22880 PF03621 MbtH-like protein AMIR_RS22885 PF00561 alpha/beta hydrolase fold AMIR_RS22890 PF01494 FAD binding domain AMIR_RS22895 PF00106 short chain dehydrogenase AMIR_RS22905 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS22905 PF00501 AMP-binding enzyme AMIR_RS22905 PF00550 Phosphopantetheine attachment site AMIR_RS22905 PF00668 Condensation domain AMIR_RS22905 PF00698 Acyl transferase domain AMIR_RS22905 PF00975 Thioesterase domain AMIR_RS22905 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS22905 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS22905 PF08659 KR domain AMIR_RS22905 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS22905 PF13602 Zinc-binding dehydrogenase AMIR_RS22905 PF14765 Polyketide synthase dehydratase AMIR_RS22905 PF16197 AMIR_RS22905 AMIR_RS22910 PF00067 Cytochrome P450 AMIR_RS22915 PF00135 Carboxylesterase family AMIR_RS22925 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS22925 PF13377 Periplasmic binding protein-like domain AMIR_RS22930 PF13416 Bacterial extracellular solute-binding protein AMIR_RS22935 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS22940 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS22945 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS22945 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS22950 PF06824 Protein of unknown function (DUF1237) AMIR_RS22955 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS22960 PF01494 FAD binding domain AMIR_RS22980 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS22990 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS22990 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS22995 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS23000 PF06445 GyrI-like small molecule binding domain AMIR_RS23000 PF13411 MerR HTH family regulatory protein AMIR_RS23005 PF13411 MerR HTH family regulatory protein AMIR_RS23005 PF13646 HEAT repeats AMIR_RS23015 PF00501 AMP-binding enzyme AMIR_RS23020 PF16715 AMIR_RS23020 AMIR_RS23035 PF07045 Protein of unknown function (DUF1330) AMIR_RS23040 PF13560 Helix-turn-helix domain AMIR_RS23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23045 PF03466 LysR substrate binding domain AMIR_RS23050 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS23055 PF00703 Glycosyl hydrolases family 2 AMIR_RS23055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMIR_RS23055 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMIR_RS23055 PF02929 Beta galactosidase small chain AMIR_RS23055 PF08305 NPCBM/NEW2 domain AMIR_RS23055 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS23060 PF10901 AMIR_RS23060 AMIR_RS23065 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS23070 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS23070 PF13602 Zinc-binding dehydrogenase AMIR_RS23075 PF12802 MarR family AMIR_RS23080 PF13520 Amino acid permease AMIR_RS23105 PF00535 Glycosyl transferase family 2 AMIR_RS23120 PF00107 Zinc-binding dehydrogenase AMIR_RS23120 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS23125 PF07690 Major Facilitator Superfamily AMIR_RS23130 PF13535 ATP-grasp domain AMIR_RS23135 PF07690 Major Facilitator Superfamily AMIR_RS23140 PF00501 AMP-binding enzyme AMIR_RS23145 PF00550 Phosphopantetheine attachment site AMIR_RS23150 PF07859 alpha/beta hydrolase fold AMIR_RS23155 PF02780 Transketolase, C-terminal domain AMIR_RS23160 PF00206 Lyase AMIR_RS23165 PF13454 FAD-NAD(P)-binding AMIR_RS23180 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS23190 PF00795 Carbon-nitrogen hydrolase AMIR_RS23195 PF07859 alpha/beta hydrolase fold AMIR_RS23200 PF13229 Right handed beta helix region AMIR_RS23205 PF01095 Pectinesterase AMIR_RS23210 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS23220 PF00072 Response regulator receiver domain AMIR_RS23235 PF00005 ABC transporter AMIR_RS23240 PF12740 Chlorophyllase enzyme AMIR_RS23245 PF00296 Luciferase-like monooxygenase AMIR_RS23250 PF13539 D-alanyl-D-alanine carboxypeptidase AMIR_RS23255 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS23260 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS23285 PF00553 Cellulose binding domain AMIR_RS23290 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23295 PF00501 AMP-binding enzyme AMIR_RS23295 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS23300 PF00171 Aldehyde dehydrogenase family AMIR_RS23305 PF09995 AMIR_RS23305 AMIR_RS23310 PF00144 Beta-lactamase AMIR_RS23315 PF07730 Histidine kinase AMIR_RS23315 PF13796 AMIR_RS23315 AMIR_RS23320 PF00072 Response regulator receiver domain AMIR_RS23320 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS23325 PF00144 Beta-lactamase AMIR_RS23335 PF03067 Chitin binding domain AMIR_RS23345 PF00202 Aminotransferase class-III AMIR_RS23350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS23350 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS23350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS23355 PF14534 Domain of unknown function (DUF4440) AMIR_RS23360 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS23360 PF00550 Phosphopantetheine attachment site AMIR_RS23360 PF00698 Acyl transferase domain AMIR_RS23360 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS23360 PF07993 Male sterility protein AMIR_RS23360 PF08659 KR domain AMIR_RS23360 PF08990 Erythronolide synthase docking AMIR_RS23360 PF14765 Polyketide synthase dehydratase AMIR_RS23360 PF16197 AMIR_RS23360 AMIR_RS23365 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS23365 PF00550 Phosphopantetheine attachment site AMIR_RS23365 PF00698 Acyl transferase domain AMIR_RS23365 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS23365 PF08659 KR domain AMIR_RS23365 PF14765 Polyketide synthase dehydratase AMIR_RS23365 PF16197 AMIR_RS23365 AMIR_RS23370 PF01613 Flavin reductase like domain AMIR_RS23375 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS23380 PF13460 NADH(P)-binding AMIR_RS23385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS23385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS23390 PF07690 Major Facilitator Superfamily AMIR_RS23395 PF01638 HxlR-like helix-turn-helix AMIR_RS23400 PF12680 SnoaL-like domain AMIR_RS23405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS23405 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS23410 PF12680 SnoaL-like domain AMIR_RS23420 PF08386 TAP-like protein AMIR_RS23425 PF13175 AAA ATPase domain AMIR_RS23430 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMIR_RS23435 PF00557 Metallopeptidase family M24 AMIR_RS23435 PF05195 Aminopeptidase P, N-terminal domain AMIR_RS23440 PF00561 alpha/beta hydrolase fold AMIR_RS23445 PF00005 ABC transporter AMIR_RS23445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS23450 PF00005 ABC transporter AMIR_RS23450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS23455 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS23460 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS23465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS23470 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS23470 PF07729 FCD domain AMIR_RS23475 PF00171 Aldehyde dehydrogenase family AMIR_RS23480 PF05544 Proline racemase AMIR_RS23485 PF00701 Dihydrodipicolinate synthetase family AMIR_RS23490 PF04324 BFD-like [2Fe-2S] binding domain AMIR_RS23490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS23495 PF13510 2Fe-2S iron-sulfur cluster binding domain AMIR_RS23500 PF01266 FAD dependent oxidoreductase AMIR_RS23510 PF01791 DeoC/LacD family aldolase AMIR_RS23515 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS23515 PF13377 Periplasmic binding protein-like domain AMIR_RS23520 PF00591 Glycosyl transferase family, a/b domain AMIR_RS23520 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS23520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS23525 PF01979 Amidohydrolase family AMIR_RS23530 PF00331 Glycosyl hydrolase family 10 AMIR_RS23550 PF00089 Trypsin AMIR_RS23570 PF14062 AMIR_RS23570 AMIR_RS23585 PF00005 ABC transporter AMIR_RS23595 PF04542 Sigma-70 region 2 AMIR_RS23595 PF08281 Sigma-70, region 4 AMIR_RS23600 PF03537 Glycoside-hydrolase family GH114 AMIR_RS23605 PF02233 NAD(P) transhydrogenase beta subunit AMIR_RS23610 PF12769 Domain of unknown function (DUF3814) AMIR_RS23615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS23615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS23625 PF14256 AMIR_RS23625 AMIR_RS23630 PF07732 Multicopper oxidase AMIR_RS23645 PF09339 IclR helix-turn-helix domain AMIR_RS23650 PF01435 Peptidase family M48 AMIR_RS23660 PF00246 Zinc carboxypeptidase AMIR_RS23665 PF13499 EF-hand domain pair AMIR_RS23670 PF04072 Leucine carboxyl methyltransferase AMIR_RS23675 PF07681 AMIR_RS23675 AMIR_RS23680 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23680 PF13305 WHG domain AMIR_RS23700 PF01297 Periplasmic solute binding protein family AMIR_RS23710 PF00005 ABC transporter AMIR_RS23715 PF00950 AMIR_RS23715 AMIR_RS23725 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIR_RS23725 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS23730 PF06030 AMIR_RS23730 AMIR_RS23745 PF07690 Major Facilitator Superfamily AMIR_RS23755 PF04016 Domain of unknown function (DUF364) AMIR_RS23760 PF00288 GHMP kinases N terminal domain AMIR_RS23765 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS23770 PF01497 Periplasmic binding protein AMIR_RS23775 PF00005 ABC transporter AMIR_RS23780 PF01032 FecCD transport family AMIR_RS23785 PF13649 Methyltransferase domain AMIR_RS23790 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23790 PF16859 AMIR_RS23790 AMIR_RS23795 PF01425 Amidase AMIR_RS23800 PF00753 Metallo-beta-lactamase superfamily AMIR_RS23810 PF01028 Eukaryotic DNA topoisomerase I, catalytic core AMIR_RS23815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23815 PF03466 LysR substrate binding domain AMIR_RS23820 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS23825 PF04909 Amidohydrolase AMIR_RS23830 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23835 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS23840 PF04143 AMIR_RS23840 AMIR_RS23850 PF01494 FAD binding domain AMIR_RS23855 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS23855 PF03704 Bacterial transcriptional activator domain AMIR_RS23860 PF09335 AMIR_RS23860 AMIR_RS23865 PF07690 Major Facilitator Superfamily AMIR_RS23870 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS23885 PF00754 F5/8 type C domain AMIR_RS23895 PF13460 NADH(P)-binding AMIR_RS23900 PF04471 Restriction endonuclease AMIR_RS23910 PF02194 AMIR_RS23910 AMIR_RS23910 PF05729 NACHT domain AMIR_RS23920 PF03029 Conserved hypothetical ATP binding protein AMIR_RS23925 PF05331 AMIR_RS23925 AMIR_RS23930 PF03259 Roadblock/LC7 domain AMIR_RS23935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS23940 PF11512 Agrobacterium tumefaciens protein Atu4866 AMIR_RS23945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS23945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS23950 PF07883 Cupin domain AMIR_RS23955 PF14100 AMIR_RS23955 AMIR_RS23960 PF02595 Glycerate kinase family AMIR_RS23965 PF01261 Xylose isomerase-like TIM barrel AMIR_RS23970 PF05719 Golgi phosphoprotein 3 (GPP34) AMIR_RS23975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS23975 PF03466 LysR substrate binding domain AMIR_RS23980 PF00202 Aminotransferase class-III AMIR_RS23990 PF04075 Domain of unknown function (DUF385) AMIR_RS24025 PF08002 Protein of unknown function (DUF1697) AMIR_RS24030 PF00067 Cytochrome P450 AMIR_RS24040 PF00535 Glycosyl transferase family 2 AMIR_RS24045 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24050 PF05368 NmrA-like family AMIR_RS24050 PF13460 NADH(P)-binding AMIR_RS24055 PF11139 AMIR_RS24055 AMIR_RS24065 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS24065 PF04101 Glycosyltransferase family 28 C-terminal domain AMIR_RS24070 PF00326 Prolyl oligopeptidase family AMIR_RS24070 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMIR_RS24075 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS24080 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS24080 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS24085 PF00067 Cytochrome P450 AMIR_RS24090 PF05147 Lanthionine synthetase C-like protein AMIR_RS24095 PF02441 Flavoprotein AMIR_RS24100 PF01575 MaoC like domain AMIR_RS24105 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS24110 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS24130 PF00501 AMP-binding enzyme AMIR_RS24135 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS24135 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS24140 PF00171 Aldehyde dehydrogenase family AMIR_RS24145 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS24145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS24145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS24150 PF00501 AMP-binding enzyme AMIR_RS24155 PF00550 Phosphopantetheine attachment site AMIR_RS24160 PF00005 ABC transporter AMIR_RS24160 PF00664 ABC transporter transmembrane region AMIR_RS24165 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24170 PF07690 Major Facilitator Superfamily AMIR_RS24175 PF07690 Major Facilitator Superfamily AMIR_RS24185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS24190 PF05593 AMIR_RS24190 AMIR_RS24190 PF07591 Pretoxin HINT domain AMIR_RS24195 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS24205 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS24205 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS24205 PF14310 Fibronectin type III-like domain AMIR_RS24210 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24210 PF13977 Bacterial transcriptional repressor AMIR_RS24215 PF00583 Acetyltransferase (GNAT) family AMIR_RS24230 PF14359 Domain of unknown function (DUF4406) AMIR_RS24235 PF04055 Radical SAM superfamily AMIR_RS24240 PF00293 NUDIX domain AMIR_RS24250 PF01546 Peptidase family M20/M25/M40 AMIR_RS24250 PF07687 Peptidase dimerisation domain AMIR_RS24260 PF01614 Bacterial transcriptional regulator AMIR_RS24265 PF01048 Phosphorylase superfamily AMIR_RS24270 PF00005 ABC transporter AMIR_RS24275 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS24280 PF09084 NMT1/THI5 like AMIR_RS24285 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS24295 PF01979 Amidohydrolase family AMIR_RS24300 PF01344 Kelch motif AMIR_RS24300 PF13418 Galactose oxidase, central domain AMIR_RS24305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS24305 PF03466 LysR substrate binding domain AMIR_RS24320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIR_RS24325 PF12802 MarR family AMIR_RS24355 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS24355 PF07729 FCD domain AMIR_RS24360 PF00005 ABC transporter AMIR_RS24365 PF01032 FecCD transport family AMIR_RS24370 PF01032 FecCD transport family AMIR_RS24375 PF01497 Periplasmic binding protein AMIR_RS24380 PF13575 AMIR_RS24380 AMIR_RS24385 PF01063 Aminotransferase class IV AMIR_RS24390 PF00296 Luciferase-like monooxygenase AMIR_RS24400 PF00501 AMP-binding enzyme AMIR_RS24400 PF00550 Phosphopantetheine attachment site AMIR_RS24400 PF00668 Condensation domain AMIR_RS24400 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS24400 PF13745 HxxPF-repeated domain AMIR_RS24405 PF01804 Penicillin amidase AMIR_RS24410 PF00668 Condensation domain AMIR_RS24415 PF00248 Aldo/keto reductase family AMIR_RS24420 PF07690 Major Facilitator Superfamily AMIR_RS24425 PF05690 Thiazole biosynthesis protein ThiG AMIR_RS24430 PF13466 STAS domain AMIR_RS24435 PF02310 B12 binding domain AMIR_RS24435 PF02607 B12 binding domain AMIR_RS24440 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS24450 PF13350 Tyrosine phosphatase family AMIR_RS24460 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS24465 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS24470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS24475 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS24480 PF07690 Major Facilitator Superfamily AMIR_RS24490 PF00939 Sodium:sulfate symporter transmembrane region AMIR_RS24495 PF02595 Glycerate kinase family AMIR_RS24505 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24505 PF00672 HAMP domain AMIR_RS24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24510 PF00072 Response regulator receiver domain AMIR_RS24510 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS24515 PF01464 Transglycosylase SLT domain AMIR_RS24520 PF00999 Sodium/hydrogen exchanger family AMIR_RS24525 PF07690 Major Facilitator Superfamily AMIR_RS24530 PF12697 Alpha/beta hydrolase family AMIR_RS24535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS24535 PF03466 LysR substrate binding domain AMIR_RS24545 PF00106 short chain dehydrogenase AMIR_RS24550 PF01975 Survival protein SurE AMIR_RS24555 PF00294 pfkB family carbohydrate kinase AMIR_RS24560 PF15892 AMIR_RS24560 AMIR_RS24565 PF01828 Peptidase A4 family AMIR_RS24570 PF01593 Flavin containing amine oxidoreductase AMIR_RS24575 PF04240 AMIR_RS24575 AMIR_RS24580 PF13641 Glycosyltransferase like family 2 AMIR_RS24585 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS24590 PF03631 AMIR_RS24590 AMIR_RS24600 PF04389 Peptidase family M28 AMIR_RS24605 PF00892 EamA-like transporter family AMIR_RS24610 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24615 PF00535 Glycosyl transferase family 2 AMIR_RS24620 PF00534 Glycosyl transferases group 1 AMIR_RS24620 PF13439 Glycosyltransferase Family 4 AMIR_RS24625 PF13439 Glycosyltransferase Family 4 AMIR_RS24625 PF13692 Glycosyl transferases group 1 AMIR_RS24630 PF13231 AMIR_RS24630 AMIR_RS24635 PF01757 AMIR_RS24635 AMIR_RS24640 PF13622 Thioesterase-like superfamily AMIR_RS24645 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24650 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIR_RS24650 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIR_RS24655 PF00544 Pectate lyase AMIR_RS24660 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS24660 PF01095 Pectinesterase AMIR_RS24665 PF00561 alpha/beta hydrolase fold AMIR_RS24670 PF03664 Glycosyl hydrolase family 62 AMIR_RS24670 PF14200 Ricin-type beta-trefoil lectin domain-like AMIR_RS24685 PF13489 Methyltransferase domain AMIR_RS24690 PF01494 FAD binding domain AMIR_RS24700 PF03176 MMPL family AMIR_RS24705 PF01047 MarR family AMIR_RS24710 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS24715 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIR_RS24720 PF00571 CBS domain AMIR_RS24720 PF01595 AMIR_RS24720 AMIR_RS24720 PF03471 Transporter associated domain AMIR_RS24745 PF00931 NB-ARC domain AMIR_RS24745 PF13424 Tetratricopeptide repeat AMIR_RS24750 PF04149 AMIR_RS24750 AMIR_RS24755 PF13560 Helix-turn-helix domain AMIR_RS24760 PF14024 AMIR_RS24760 AMIR_RS24765 PF04075 Domain of unknown function (DUF385) AMIR_RS24770 PF01300 Telomere recombination AMIR_RS24780 PF09335 AMIR_RS24780 AMIR_RS24785 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS24795 PF00072 Response regulator receiver domain AMIR_RS24795 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS24800 PF07730 Histidine kinase AMIR_RS24805 PF12697 Alpha/beta hydrolase family AMIR_RS24815 PF13302 Acetyltransferase (GNAT) domain AMIR_RS24820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS24820 PF00364 Biotin-requiring enzyme AMIR_RS24820 PF02817 e3 binding domain AMIR_RS24825 PF02779 Transketolase, pyrimidine binding domain AMIR_RS24825 PF02780 Transketolase, C-terminal domain AMIR_RS24830 PF00676 Dehydrogenase E1 component AMIR_RS24835 PF01037 AsnC family AMIR_RS24835 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS24840 PF00188 Cysteine-rich secretory protein family AMIR_RS24845 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24845 PF00672 HAMP domain AMIR_RS24845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24850 PF00072 Response regulator receiver domain AMIR_RS24850 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS24865 PF13358 DDE superfamily endonuclease AMIR_RS24865 PF13565 AMIR_RS24865 AMIR_RS24875 PF00990 GGDEF domain AMIR_RS24880 PF04199 Putative cyclase AMIR_RS24885 PF00107 Zinc-binding dehydrogenase AMIR_RS24885 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS24890 PF13279 Thioesterase-like superfamily AMIR_RS24895 PF00027 Cyclic nucleotide-binding domain AMIR_RS24900 PF00027 Cyclic nucleotide-binding domain AMIR_RS24905 PF00348 Polyprenyl synthetase AMIR_RS24910 PF02401 LytB protein AMIR_RS24915 PF02779 Transketolase, pyrimidine binding domain AMIR_RS24915 PF02780 Transketolase, C-terminal domain AMIR_RS24915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIR_RS24920 PF05331 AMIR_RS24920 AMIR_RS24925 PF13490 Putative zinc-finger AMIR_RS24930 PF04542 Sigma-70 region 2 AMIR_RS24930 PF04545 Sigma-70, region 4 AMIR_RS24935 PF00535 Glycosyl transferase family 2 AMIR_RS24940 PF00107 Zinc-binding dehydrogenase AMIR_RS24940 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS24945 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS24950 PF06803 AMIR_RS24950 AMIR_RS24955 PF03601 AMIR_RS24955 AMIR_RS24960 PF01553 Acyltransferase AMIR_RS24965 PF00072 Response regulator receiver domain AMIR_RS24965 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS24970 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS24970 PF00672 HAMP domain AMIR_RS24970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS24970 PF05227 CHASE3 domain AMIR_RS24975 PF00072 Response regulator receiver domain AMIR_RS24980 PF12697 Alpha/beta hydrolase family AMIR_RS24985 PF04149 AMIR_RS24985 AMIR_RS25010 PF13245 Part of AAA domain AMIR_RS25025 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS25030 PF00106 short chain dehydrogenase AMIR_RS25035 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS25040 PF01979 Amidohydrolase family AMIR_RS25040 PF07676 WD40-like Beta Propeller Repeat AMIR_RS25050 PF05598 AMIR_RS25050 AMIR_RS25050 PF13751 AMIR_RS25050 AMIR_RS25055 PF13245 Part of AAA domain AMIR_RS25060 PF00005 ABC transporter AMIR_RS25065 PF01032 FecCD transport family AMIR_RS25070 PF01032 FecCD transport family AMIR_RS25075 PF00294 pfkB family carbohydrate kinase AMIR_RS25080 PF00107 Zinc-binding dehydrogenase AMIR_RS25080 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS25085 PF00083 Sugar (and other) transporter AMIR_RS25090 PF01232 Mannitol dehydrogenase Rossmann domain AMIR_RS25090 PF08125 Mannitol dehydrogenase C-terminal domain AMIR_RS25095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIR_RS25095 PF13378 Enolase C-terminal domain-like AMIR_RS25100 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS25100 PF07729 FCD domain AMIR_RS25110 PF03621 MbtH-like protein AMIR_RS25115 PF00501 AMP-binding enzyme AMIR_RS25115 PF00550 Phosphopantetheine attachment site AMIR_RS25115 PF00668 Condensation domain AMIR_RS25115 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS25115 PF13745 HxxPF-repeated domain AMIR_RS25120 PF01497 Periplasmic binding protein AMIR_RS25125 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIR_RS25130 PF00005 ABC transporter AMIR_RS25130 PF00664 ABC transporter transmembrane region AMIR_RS25140 PF00753 Metallo-beta-lactamase superfamily AMIR_RS25145 PF01510 N-acetylmuramoyl-L-alanine amidase AMIR_RS25150 PF01593 Flavin containing amine oxidoreductase AMIR_RS25155 PF00331 Glycosyl hydrolase family 10 AMIR_RS25155 PF00553 Cellulose binding domain AMIR_RS25165 PF00722 Glycosyl hydrolases family 16 AMIR_RS25170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS25170 PF03466 LysR substrate binding domain AMIR_RS25175 PF01810 AMIR_RS25175 AMIR_RS25180 PF01872 RibD C-terminal domain AMIR_RS25190 PF01614 Bacterial transcriptional regulator AMIR_RS25190 PF09339 IclR helix-turn-helix domain AMIR_RS25195 PF02627 Carboxymuconolactone decarboxylase family AMIR_RS25200 PF00561 alpha/beta hydrolase fold AMIR_RS25205 PF00775 Dioxygenase AMIR_RS25210 PF00775 Dioxygenase AMIR_RS25210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMIR_RS25215 PF01144 Coenzyme A transferase AMIR_RS25220 PF01144 Coenzyme A transferase AMIR_RS25230 PF01935 Domain of unknown function DUF87 AMIR_RS25235 PF07228 Stage II sporulation protein E (SpoIIE) AMIR_RS25240 PF00072 Response regulator receiver domain AMIR_RS25240 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS25240 PF00672 HAMP domain AMIR_RS25240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS25240 PF13185 GAF domain AMIR_RS25245 PF13466 STAS domain AMIR_RS25250 PF13581 Histidine kinase-like ATPase domain AMIR_RS25255 PF02541 Ppx/GppA phosphatase family AMIR_RS25260 PF13466 STAS domain AMIR_RS25270 PF00583 Acetyltransferase (GNAT) family AMIR_RS25275 PF00296 Luciferase-like monooxygenase AMIR_RS25280 PF00965 Tissue inhibitor of metalloproteinase AMIR_RS25285 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS25285 PF13377 Periplasmic binding protein-like domain AMIR_RS25290 PF02016 LD-carboxypeptidase AMIR_RS25295 PF00106 short chain dehydrogenase AMIR_RS25300 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS25300 PF13305 WHG domain AMIR_RS25310 PF03067 Chitin binding domain AMIR_RS25320 PF05532 CsbD-like AMIR_RS25330 PF00128 Alpha amylase, catalytic domain AMIR_RS25330 PF11941 Domain of unknown function (DUF3459) AMIR_RS25335 PF00128 Alpha amylase, catalytic domain AMIR_RS25340 PF00128 Alpha amylase, catalytic domain AMIR_RS25340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS25350 PF02446 4-alpha-glucanotransferase AMIR_RS25355 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS25355 PF13377 Periplasmic binding protein-like domain AMIR_RS25360 PF00578 AhpC/TSA family AMIR_RS25365 PF00296 Luciferase-like monooxygenase AMIR_RS25370 PF01551 Peptidase family M23 AMIR_RS25375 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS25375 PF00912 Transglycosylase AMIR_RS25380 PF00294 pfkB family carbohydrate kinase AMIR_RS25385 PF04542 Sigma-70 region 2 AMIR_RS25385 PF08281 Sigma-70, region 4 AMIR_RS25390 PF00561 alpha/beta hydrolase fold AMIR_RS25395 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS25400 PF12804 MobA-like NTP transferase domain AMIR_RS25405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS25405 PF03466 LysR substrate binding domain AMIR_RS25410 PF00106 short chain dehydrogenase AMIR_RS25415 PF00455 AMIR_RS25415 AMIR_RS25415 PF08220 DeoR-like helix-turn-helix domain AMIR_RS25420 PF13580 SIS domain AMIR_RS25425 PF00005 ABC transporter AMIR_RS25425 PF00664 ABC transporter transmembrane region AMIR_RS25430 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS25440 PF00005 ABC transporter AMIR_RS25440 PF12848 ABC transporter AMIR_RS25445 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS25455 PF04542 Sigma-70 region 2 AMIR_RS25455 PF08281 Sigma-70, region 4 AMIR_RS25475 PF00082 Subtilase family AMIR_RS25475 PF01483 Proprotein convertase P-domain AMIR_RS25480 PF01966 HD domain AMIR_RS25500 PF05231 AMIR_RS25500 AMIR_RS25505 PF05834 AMIR_RS25505 AMIR_RS25510 PF00563 EAL domain AMIR_RS25510 PF00990 GGDEF domain AMIR_RS25515 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS25520 PF00571 CBS domain AMIR_RS25525 PF01883 Domain of unknown function DUF59 AMIR_RS25530 PF01592 NifU-like N terminal domain AMIR_RS25535 PF00266 Aminotransferase class-V AMIR_RS25540 PF00005 ABC transporter AMIR_RS25545 PF00355 Rieske [2Fe-2S] domain AMIR_RS25550 PF01458 Uncharacterized protein family (UPF0051) AMIR_RS25555 PF01458 Uncharacterized protein family (UPF0051) AMIR_RS25560 PF13412 Winged helix-turn-helix DNA-binding AMIR_RS25565 PF00106 short chain dehydrogenase AMIR_RS25570 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS25580 PF01734 Patatin-like phospholipase AMIR_RS25580 PF11856 AMIR_RS25580 AMIR_RS25590 PF06197 AMIR_RS25590 AMIR_RS25595 PF00005 ABC transporter AMIR_RS25600 PF01061 AMIR_RS25600 AMIR_RS25610 PF10824 Protein of unknown function (DUF2580) AMIR_RS25615 PF06013 Proteins of 100 residues with WXG AMIR_RS25630 PF02628 AMIR_RS25630 AMIR_RS25635 PF01022 Bacterial regulatory protein, arsR family AMIR_RS25645 PF03259 Roadblock/LC7 domain AMIR_RS25650 PF00672 HAMP domain AMIR_RS25650 PF08376 Nitrate and nitrite sensing AMIR_RS25655 PF04341 AMIR_RS25655 AMIR_RS25660 PF00474 Sodium:solute symporter family AMIR_RS25675 PF05960 Bacterial protein of unknown function (DUF885) AMIR_RS25680 PF00107 Zinc-binding dehydrogenase AMIR_RS25680 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS25685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS25705 PF04542 Sigma-70 region 2 AMIR_RS25705 PF08281 Sigma-70, region 4 AMIR_RS25715 PF01040 UbiA prenyltransferase family AMIR_RS25720 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS25720 PF02779 Transketolase, pyrimidine binding domain AMIR_RS25720 PF02780 Transketolase, C-terminal domain AMIR_RS25725 PF00923 Transaldolase AMIR_RS25730 PF00342 Phosphoglucose isomerase AMIR_RS25735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIR_RS25735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIR_RS25740 PF10128 AMIR_RS25740 AMIR_RS25745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMIR_RS25750 PF07730 Histidine kinase AMIR_RS25765 PF13397 Domain of unknown function (DUF4109) AMIR_RS25770 PF03840 Preprotein translocase SecG subunit AMIR_RS25775 PF00121 Triosephosphate isomerase AMIR_RS25780 PF00162 Phosphoglycerate kinase AMIR_RS25785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIR_RS25785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMIR_RS25800 PF02650 WhiA C-terminal HTH domain AMIR_RS25800 PF10298 WhiA N-terminal LAGLIDADG-like domain AMIR_RS25800 PF14527 WhiA LAGLIDADG-like domain AMIR_RS25805 PF01933 Uncharacterised protein family UPF0052 AMIR_RS25810 PF03668 AMIR_RS25810 AMIR_RS25815 PF01541 GIY-YIG catalytic domain AMIR_RS25815 PF02151 UvrB/uvrC motif AMIR_RS25815 PF08459 UvrC Helix-hairpin-helix N-terminal AMIR_RS25815 PF14520 Helix-hairpin-helix domain AMIR_RS25820 PF00355 Rieske [2Fe-2S] domain AMIR_RS25825 PF00355 Rieske [2Fe-2S] domain AMIR_RS25835 PF13560 Helix-turn-helix domain AMIR_RS25845 PF08279 HTH domain AMIR_RS25845 PF13280 AMIR_RS25845 AMIR_RS25855 PF04542 Sigma-70 region 2 AMIR_RS25855 PF04545 Sigma-70, region 4 AMIR_RS25860 PF04389 Peptidase family M28 AMIR_RS25865 PF10756 AMIR_RS25865 AMIR_RS25870 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMIR_RS25875 PF00925 GTP cyclohydrolase II AMIR_RS25875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMIR_RS25880 PF00677 Lumazine binding domain AMIR_RS25885 PF00834 Ribulose-phosphate 3 epimerase family AMIR_RS25895 PF02441 Flavoprotein AMIR_RS25900 PF01029 NusB family AMIR_RS25900 PF01189 NOL1/NOP2/sun family AMIR_RS25905 PF00551 Formyl transferase AMIR_RS25905 PF02911 Formyl transferase, C-terminal domain AMIR_RS25910 PF01327 Polypeptide deformylase AMIR_RS25915 PF04542 Sigma-70 region 2 AMIR_RS25915 PF08281 Sigma-70, region 4 AMIR_RS25930 PF08281 Sigma-70, region 4 AMIR_RS25940 PF01019 Gamma-glutamyltranspeptidase AMIR_RS25945 PF13396 AMIR_RS25945 AMIR_RS25955 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMIR_RS25955 PF02772 S-adenosylmethionine synthetase, central domain AMIR_RS25955 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMIR_RS25960 PF02441 Flavoprotein AMIR_RS25960 PF04127 DNA / pantothenate metabolism flavoprotein AMIR_RS25965 PF01192 RNA polymerase Rpb6 AMIR_RS25970 PF00625 Guanylate kinase AMIR_RS25980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMIR_RS25985 PF02142 MGS-like domain AMIR_RS25985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS25985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIR_RS25990 PF00117 Glutamine amidotransferase class-I AMIR_RS25990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMIR_RS26000 PF01979 Amidohydrolase family AMIR_RS26005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIR_RS26005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIR_RS26010 PF00156 Phosphoribosyl transferase domain AMIR_RS26015 PF01381 Helix-turn-helix AMIR_RS26020 PF01029 NusB family AMIR_RS26025 PF01132 Elongation factor P (EF-P) OB domain AMIR_RS26025 PF08207 Elongation factor P (EF-P) KOW-like domain AMIR_RS26025 PF09285 Elongation factor P, C-terminal AMIR_RS26030 PF00557 Metallopeptidase family M24 AMIR_RS26030 PF01321 Creatinase/Prolidase N-terminal domain AMIR_RS26040 PF01220 Dehydroquinase class II AMIR_RS26045 PF01761 3-dehydroquinate synthase AMIR_RS26050 PF01202 Shikimate kinase AMIR_RS26055 PF01264 Chorismate synthase AMIR_RS26060 PF01478 Type IV leader peptidase family AMIR_RS26065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMIR_RS26070 PF00367 phosphotransferase system, EIIB AMIR_RS26075 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS26075 PF07702 UTRA domain AMIR_RS26080 PF02378 Phosphotransferase system, EIIC AMIR_RS26085 PF00381 PTS HPr component phosphorylation site AMIR_RS26090 PF08501 Shikimate dehydrogenase substrate binding domain AMIR_RS26095 PF02618 YceG-like family AMIR_RS26100 PF03652 Uncharacterised protein family (UPF0081) AMIR_RS26105 PF01411 tRNA synthetases class II (A) AMIR_RS26105 PF02272 DHHA1 domain AMIR_RS26105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS26115 PF06103 AMIR_RS26115 AMIR_RS26120 PF08007 Cupin superfamily protein AMIR_RS26125 PF06999 AMIR_RS26125 AMIR_RS26130 PF13649 Methyltransferase domain AMIR_RS26135 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS26135 PF12002 MgsA AAA+ ATPase C terminal AMIR_RS26135 PF16193 AMIR_RS26135 AMIR_RS26140 PF00485 Phosphoribulokinase / Uridine kinase family AMIR_RS26145 PF00270 DEAD/DEAH box helicase AMIR_RS26145 PF00271 Helicase conserved C-terminal domain AMIR_RS26145 PF12029 AMIR_RS26145 AMIR_RS26150 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS26150 PF00931 NB-ARC domain AMIR_RS26150 PF03704 Bacterial transcriptional activator domain AMIR_RS26155 PF01476 LysM domain AMIR_RS26155 PF06737 Transglycosylase-like domain AMIR_RS26165 PF00072 Response regulator receiver domain AMIR_RS26165 PF04397 LytTr DNA-binding domain AMIR_RS26170 PF04341 AMIR_RS26170 AMIR_RS26175 PF00474 Sodium:solute symporter family AMIR_RS26180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS26180 PF06580 AMIR_RS26180 AMIR_RS26185 PF14087 AMIR_RS26185 AMIR_RS26190 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS26190 PF13305 WHG domain AMIR_RS26195 PF13340 AMIR_RS26195 AMIR_RS26200 PF00149 Calcineurin-like phosphoesterase AMIR_RS26205 PF01648 4'-phosphopantetheinyl transferase superfamily AMIR_RS26215 PF13304 AAA domain AMIR_RS26220 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS26225 PF01638 HxlR-like helix-turn-helix AMIR_RS26240 PF06197 AMIR_RS26240 AMIR_RS26245 PF00293 NUDIX domain AMIR_RS26250 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS26255 PF08241 Methyltransferase domain AMIR_RS26260 PF00107 Zinc-binding dehydrogenase AMIR_RS26260 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS26265 PF12833 Helix-turn-helix domain AMIR_RS26265 PF12852 Cupin AMIR_RS26270 PF14428 AMIR_RS26270 AMIR_RS26275 PF14430 AMIR_RS26275 AMIR_RS26290 PF00106 short chain dehydrogenase AMIR_RS26295 PF13087 AAA domain AMIR_RS26295 PF13482 RNase_H superfamily AMIR_RS26295 PF13604 AAA domain AMIR_RS26305 PF00107 Zinc-binding dehydrogenase AMIR_RS26305 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS26310 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26315 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26320 PF01547 Bacterial extracellular solute-binding protein AMIR_RS26325 PF00455 AMIR_RS26325 AMIR_RS26325 PF08220 DeoR-like helix-turn-helix domain AMIR_RS26340 PF05147 Lanthionine synthetase C-like protein AMIR_RS26340 PF13575 AMIR_RS26340 AMIR_RS26350 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS26350 PF13191 AAA ATPase domain AMIR_RS26355 PF03473 MOSC domain AMIR_RS26360 PF00248 Aldo/keto reductase family AMIR_RS26365 PF16670 AMIR_RS26365 AMIR_RS26370 PF00171 Aldehyde dehydrogenase family AMIR_RS26370 PF01575 MaoC like domain AMIR_RS26375 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS26375 PF00722 Glycosyl hydrolases family 16 AMIR_RS26385 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS26385 PF00931 NB-ARC domain AMIR_RS26385 PF03704 Bacterial transcriptional activator domain AMIR_RS26385 PF13424 Tetratricopeptide repeat AMIR_RS26390 PF01757 AMIR_RS26390 AMIR_RS26395 PF09754 PAC2 family AMIR_RS26400 PF00005 ABC transporter AMIR_RS26400 PF00664 ABC transporter transmembrane region AMIR_RS26410 PF13556 PucR C-terminal helix-turn-helix domain AMIR_RS26415 PF14014 AMIR_RS26415 AMIR_RS26420 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS26425 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS26430 PF00849 RNA pseudouridylate synthase AMIR_RS26435 PF03713 Domain of unknown function (DUF305) AMIR_RS26440 PF02839 Carbohydrate binding domain AMIR_RS26440 PF03067 Chitin binding domain AMIR_RS26450 PF00182 Chitinase class I AMIR_RS26455 PF13602 Zinc-binding dehydrogenase AMIR_RS26460 PF00553 Cellulose binding domain AMIR_RS26460 PF00759 Glycosyl hydrolase family 9 AMIR_RS26460 PF02018 Carbohydrate binding domain AMIR_RS26460 PF02927 N-terminal ig-like domain of cellulase AMIR_RS26465 PF00106 short chain dehydrogenase AMIR_RS26470 PF13354 Beta-lactamase enzyme family AMIR_RS26475 PF04261 Dyp-type peroxidase family AMIR_RS26480 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS26480 PF13377 Periplasmic binding protein-like domain AMIR_RS26485 PF00571 CBS domain AMIR_RS26485 PF01595 AMIR_RS26485 AMIR_RS26485 PF03471 Transporter associated domain AMIR_RS26490 PF01595 AMIR_RS26490 AMIR_RS26500 PF13519 von Willebrand factor type A domain AMIR_RS26500 PF13531 Bacterial extracellular solute-binding protein AMIR_RS26505 PF00069 Protein kinase domain AMIR_RS26515 PF12840 Helix-turn-helix domain AMIR_RS26520 PF05977 Transmembrane secretion effector AMIR_RS26525 PF02347 Glycine cleavage system P-protein AMIR_RS26530 PF13411 MerR HTH family regulatory protein AMIR_RS26535 PF02577 Bifunctional nuclease AMIR_RS26540 PF00376 MerR family regulatory protein AMIR_RS26545 PF00498 FHA domain AMIR_RS26550 PF01597 Glycine cleavage H-protein AMIR_RS26555 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS26565 PF13466 STAS domain AMIR_RS26570 PF13581 Histidine kinase-like ATPase domain AMIR_RS26575 PF13581 Histidine kinase-like ATPase domain AMIR_RS26580 PF04539 Sigma-70 region 3 AMIR_RS26580 PF04542 Sigma-70 region 2 AMIR_RS26580 PF04545 Sigma-70, region 4 AMIR_RS26585 PF02467 AMIR_RS26585 AMIR_RS26590 PF13398 Peptidase M50B-like AMIR_RS26595 PF00248 Aldo/keto reductase family AMIR_RS26610 PF13490 Putative zinc-finger AMIR_RS26615 PF04542 Sigma-70 region 2 AMIR_RS26615 PF04545 Sigma-70, region 4 AMIR_RS26620 PF09362 AMIR_RS26620 AMIR_RS26625 PF03551 Transcriptional regulator PadR-like family AMIR_RS26630 PF04055 Radical SAM superfamily AMIR_RS26635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS26635 PF07730 Histidine kinase AMIR_RS26640 PF00072 Response regulator receiver domain AMIR_RS26640 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS26645 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS26655 PF07676 WD40-like Beta Propeller Repeat AMIR_RS26655 PF13519 von Willebrand factor type A domain AMIR_RS26665 PF09684 AMIR_RS26665 AMIR_RS26670 PF04865 AMIR_RS26670 AMIR_RS26675 PF04965 Gene 25-like lysozyme AMIR_RS26680 PF05488 PAAR motif AMIR_RS26685 PF05954 Phage late control gene D protein (GPD) AMIR_RS26690 PF01476 LysM domain AMIR_RS26695 PF06841 AMIR_RS26695 AMIR_RS26710 PF06841 AMIR_RS26710 AMIR_RS26715 PF04984 Phage tail sheath protein AMIR_RS26720 PF13699 AMIR_RS26720 AMIR_RS26725 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS26730 PF14065 AMIR_RS26730 AMIR_RS26735 PF13560 Helix-turn-helix domain AMIR_RS26740 PF04149 AMIR_RS26740 AMIR_RS26750 PF13581 Histidine kinase-like ATPase domain AMIR_RS26755 PF04539 Sigma-70 region 3 AMIR_RS26755 PF04542 Sigma-70 region 2 AMIR_RS26755 PF04545 Sigma-70, region 4 AMIR_RS26770 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIR_RS26775 PF01740 STAS domain AMIR_RS26790 PF01965 DJ-1/PfpI family AMIR_RS26795 PF01965 DJ-1/PfpI family AMIR_RS26795 PF12833 Helix-turn-helix domain AMIR_RS26800 PF00069 Protein kinase domain AMIR_RS26805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS26815 PF12770 AMIR_RS26815 AMIR_RS26815 PF13424 Tetratricopeptide repeat AMIR_RS26820 PF00082 Subtilase family AMIR_RS26825 PF04542 Sigma-70 region 2 AMIR_RS26835 PF00563 EAL domain AMIR_RS26835 PF00990 GGDEF domain AMIR_RS26835 PF13188 PAS domain AMIR_RS26840 PF03029 Conserved hypothetical ATP binding protein AMIR_RS26845 PF03259 Roadblock/LC7 domain AMIR_RS26850 PF00672 HAMP domain AMIR_RS26850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS26850 PF08376 Nitrate and nitrite sensing AMIR_RS26855 PF09084 NMT1/THI5 like AMIR_RS26860 PF01494 FAD binding domain AMIR_RS26865 PF00005 ABC transporter AMIR_RS26870 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26875 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS26885 PF00849 RNA pseudouridylate synthase AMIR_RS26885 PF01479 S4 domain AMIR_RS26890 PF04079 Putative transcriptional regulators (Ypuh-like) AMIR_RS26895 PF02616 ScpA/B protein AMIR_RS26905 PF13614 AAA domain AMIR_RS26910 PF12840 Helix-turn-helix domain AMIR_RS26915 PF00589 Phage integrase family AMIR_RS26915 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS26920 PF05154 AMIR_RS26920 AMIR_RS26920 PF08044 AMIR_RS26920 AMIR_RS26925 PF10825 AMIR_RS26925 AMIR_RS26930 PF00293 NUDIX domain AMIR_RS26935 PF00117 Glutamine amidotransferase class-I AMIR_RS26935 PF06418 CTP synthase N-terminus AMIR_RS26940 PF11382 AMIR_RS26940 AMIR_RS26945 PF12555 AMIR_RS26945 AMIR_RS26955 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS26960 PF01513 ATP-NAD kinase AMIR_RS26965 PF01479 S4 domain AMIR_RS26965 PF01728 FtsJ-like methyltransferase AMIR_RS26970 PF13242 HAD-hyrolase-like AMIR_RS26970 PF13344 Haloacid dehalogenase-like hydrolase AMIR_RS26995 PF00579 tRNA synthetases class I (W and Y) AMIR_RS27005 PF13202 EF hand AMIR_RS27005 PF13499 EF-hand domain pair AMIR_RS27010 PF02245 Methylpurine-DNA glycosylase (MPG) AMIR_RS27015 PF00206 Lyase AMIR_RS27015 PF14698 Argininosuccinate lyase C-terminal AMIR_RS27020 PF00764 Arginosuccinate synthase AMIR_RS27025 PF01316 Arginine repressor, DNA binding domain AMIR_RS27025 PF02863 Arginine repressor, C-terminal domain AMIR_RS27030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIR_RS27030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIR_RS27035 PF00202 Aminotransferase class-III AMIR_RS27040 PF00696 Amino acid kinase family AMIR_RS27045 PF01960 ArgJ family AMIR_RS27050 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS27050 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIR_RS27055 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS27055 PF13602 Zinc-binding dehydrogenase AMIR_RS27065 PF01381 Helix-turn-helix AMIR_RS27075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS27075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS27085 PF01588 Putative tRNA binding domain AMIR_RS27085 PF03147 Ferredoxin-fold anticodon binding domain AMIR_RS27085 PF03483 B3/4 domain AMIR_RS27085 PF03484 tRNA synthetase B5 domain AMIR_RS27090 PF01409 tRNA synthetases class II core domain (F) AMIR_RS27090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMIR_RS27095 PF00183 Hsp90 protein AMIR_RS27095 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS27105 PF00072 Response regulator receiver domain AMIR_RS27105 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS27110 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS27110 PF00672 HAMP domain AMIR_RS27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS27115 PF00588 SpoU rRNA Methylase family AMIR_RS27115 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS27120 PF00453 Ribosomal protein L20 AMIR_RS27125 PF01632 Ribosomal protein L35 AMIR_RS27130 PF00707 Translation initiation factor IF-3, C-terminal domain AMIR_RS27130 PF05198 Translation initiation factor IF-3, N-terminal domain AMIR_RS27145 PF00931 NB-ARC domain AMIR_RS27145 PF13560 Helix-turn-helix domain AMIR_RS27150 PF01042 Endoribonuclease L-PSP AMIR_RS27155 PF01614 Bacterial transcriptional regulator AMIR_RS27155 PF09339 IclR helix-turn-helix domain AMIR_RS27160 PF00294 pfkB family carbohydrate kinase AMIR_RS27165 PF01168 Alanine racemase, N-terminal domain AMIR_RS27165 PF14031 Putative serine dehydratase domain AMIR_RS27170 PF07969 Amidohydrolase family AMIR_RS27175 PF02447 AMIR_RS27175 AMIR_RS27180 PF00005 ABC transporter AMIR_RS27185 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS27195 PF00753 Metallo-beta-lactamase superfamily AMIR_RS27215 PF00155 Aminotransferase class I and II AMIR_RS27220 PF01022 Bacterial regulatory protein, arsR family AMIR_RS27225 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS27230 PF12833 Helix-turn-helix domain AMIR_RS27235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS27240 PF03745 Domain of unknown function (DUF309) AMIR_RS27245 PF00583 Acetyltransferase (GNAT) family AMIR_RS27260 PF07264 Etoposide-induced protein 2 AMIR_RS27265 PF00089 Trypsin AMIR_RS27270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIR_RS27275 PF02575 YbaB/EbfC DNA-binding family AMIR_RS27285 PF09594 AMIR_RS27285 AMIR_RS27295 PF08808 AMIR_RS27295 AMIR_RS27300 PF00583 Acetyltransferase (GNAT) family AMIR_RS27310 PF00027 Cyclic nucleotide-binding domain AMIR_RS27310 PF13545 Crp-like helix-turn-helix domain AMIR_RS27315 PF00326 Prolyl oligopeptidase family AMIR_RS27315 PF07676 WD40-like Beta Propeller Repeat AMIR_RS27320 PF03741 AMIR_RS27320 AMIR_RS27325 PF00005 ABC transporter AMIR_RS27325 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIR_RS27330 PF12730 AMIR_RS27330 AMIR_RS27335 PF00271 Helicase conserved C-terminal domain AMIR_RS27335 PF02151 UvrB/uvrC motif AMIR_RS27335 PF04851 Type III restriction enzyme, res subunit AMIR_RS27335 PF12344 Ultra-violet resistance protein B AMIR_RS27345 PF04167 Protein of unknown function (DUF402) AMIR_RS27355 PF01121 Dephospho-CoA kinase AMIR_RS27355 PF04229 GrpB protein AMIR_RS27365 PF00575 S1 RNA binding domain AMIR_RS27370 PF08241 Methyltransferase domain AMIR_RS27375 PF00583 Acetyltransferase (GNAT) family AMIR_RS27385 PF12698 ABC-2 family transporter protein AMIR_RS27390 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS27405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS27405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS27415 PF00476 DNA polymerase family A AMIR_RS27415 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIR_RS27415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIR_RS27420 PF03061 Thioesterase superfamily AMIR_RS27430 PF00005 ABC transporter AMIR_RS27435 PF00005 ABC transporter AMIR_RS27435 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIR_RS27440 PF02653 AMIR_RS27440 AMIR_RS27445 PF02653 AMIR_RS27445 AMIR_RS27450 PF13458 Periplasmic binding protein AMIR_RS27455 PF00072 Response regulator receiver domain AMIR_RS27455 PF03861 ANTAR domain AMIR_RS27465 PF04978 Protein of unknown function (DUF664) AMIR_RS27475 PF13380 CoA binding domain AMIR_RS27480 PF01042 Endoribonuclease L-PSP AMIR_RS27485 PF12697 Alpha/beta hydrolase family AMIR_RS27490 PF05729 NACHT domain AMIR_RS27495 PF00805 Pentapeptide repeats (8 copies) AMIR_RS27500 PF00270 DEAD/DEAH box helicase AMIR_RS27500 PF00271 Helicase conserved C-terminal domain AMIR_RS27500 PF00570 HRDC domain AMIR_RS27500 PF09382 RQC domain AMIR_RS27500 PF16124 AMIR_RS27500 AMIR_RS27515 PF02575 YbaB/EbfC DNA-binding family AMIR_RS27525 PF13560 Helix-turn-helix domain AMIR_RS27530 PF01381 Helix-turn-helix AMIR_RS27620 PF13671 AAA domain AMIR_RS27625 PF00145 C-5 cytosine-specific DNA methylase AMIR_RS27640 PF02467 AMIR_RS27640 AMIR_RS27680 PF02481 DNA recombination-mediator protein A AMIR_RS27685 PF00156 Phosphoribosyl transferase domain AMIR_RS27705 PF04307 AMIR_RS27705 AMIR_RS27730 PF10935 AMIR_RS27730 AMIR_RS27745 PF00293 NUDIX domain AMIR_RS27770 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS27770 PF07702 UTRA domain AMIR_RS27805 PF13472 GDSL-like Lipase/Acylhydrolase family AMIR_RS27855 PF05133 Phage portal protein, SPP1 Gp6-like AMIR_RS27870 PF04327 Protein of unknown function (DUF464) AMIR_RS27905 PF11367 Protein of unknown function (DUF3168) AMIR_RS27925 PF10145 AMIR_RS27925 AMIR_RS27985 PF00589 Phage integrase family AMIR_RS27985 PF14659 Phage integrase, N-terminal SAM-like domain AMIR_RS27995 PF02583 Metal-sensitive transcriptional repressor AMIR_RS28000 PF11774 Lsr2 AMIR_RS28005 PF00117 Glutamine amidotransferase class-I AMIR_RS28005 PF00425 chorismate binding enzyme AMIR_RS28005 PF04715 Anthranilate synthase component I, N terminal region AMIR_RS28015 PF04542 Sigma-70 region 2 AMIR_RS28015 PF08281 Sigma-70, region 4 AMIR_RS28020 PF00149 Calcineurin-like phosphoesterase AMIR_RS28025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS28025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS28030 PF02675 S-adenosylmethionine decarboxylase AMIR_RS28035 PF01564 Spermine/spermidine synthase AMIR_RS28040 PF00326 Prolyl oligopeptidase family AMIR_RS28040 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMIR_RS28045 PF00881 Nitroreductase family AMIR_RS28050 PF00464 Serine hydroxymethyltransferase AMIR_RS28055 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS28055 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIR_RS28060 PF12823 AMIR_RS28060 AMIR_RS28080 PF02515 CoA-transferase family III AMIR_RS28085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS28085 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS28085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS28090 PF00583 Acetyltransferase (GNAT) family AMIR_RS28095 PF00108 Thiolase, N-terminal domain AMIR_RS28095 PF02803 Thiolase, C-terminal domain AMIR_RS28100 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS28100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIR_RS28100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIR_RS28105 PF12625 AMIR_RS28105 AMIR_RS28105 PF12833 Helix-turn-helix domain AMIR_RS28115 PF00583 Acetyltransferase (GNAT) family AMIR_RS28120 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS28120 PF13377 Periplasmic binding protein-like domain AMIR_RS28125 PF02687 AMIR_RS28125 AMIR_RS28125 PF12704 MacB-like periplasmic core domain AMIR_RS28130 PF00005 ABC transporter AMIR_RS28135 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS28135 PF13191 AAA ATPase domain AMIR_RS28140 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS28140 PF00931 NB-ARC domain AMIR_RS28140 PF03704 Bacterial transcriptional activator domain AMIR_RS28140 PF13424 Tetratricopeptide repeat AMIR_RS28145 PF09335 AMIR_RS28145 AMIR_RS28150 PF04149 AMIR_RS28150 AMIR_RS28155 PF13560 Helix-turn-helix domain AMIR_RS28165 PF00484 Carbonic anhydrase AMIR_RS28165 PF00916 AMIR_RS28165 AMIR_RS28170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIR_RS28170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS28175 PF04542 Sigma-70 region 2 AMIR_RS28175 PF11790 AMIR_RS28175 AMIR_RS28180 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIR_RS28185 PF13622 Thioesterase-like superfamily AMIR_RS28190 PF00224 Pyruvate kinase, barrel domain AMIR_RS28190 PF02887 Pyruvate kinase, alpha/beta domain AMIR_RS28195 PF04892 AMIR_RS28195 AMIR_RS28200 PF09365 AMIR_RS28200 AMIR_RS28215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS28215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMIR_RS28220 PF00310 Glutamine amidotransferases class-II AMIR_RS28220 PF01493 GXGXG motif AMIR_RS28220 PF01645 Conserved region in glutamate synthase AMIR_RS28220 PF04898 Glutamate synthase central domain AMIR_RS28225 PF00375 Sodium:dicarboxylate symporter family AMIR_RS28230 PF16868 AMIR_RS28230 AMIR_RS28235 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS28235 PF00672 HAMP domain AMIR_RS28235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS28245 PF00072 Response regulator receiver domain AMIR_RS28245 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS28250 PF01790 AMIR_RS28250 AMIR_RS28255 PF00290 Tryptophan synthase alpha chain AMIR_RS28260 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS28265 PF00218 Indole-3-glycerol phosphate synthase AMIR_RS28275 PF00425 chorismate binding enzyme AMIR_RS28275 PF04715 Anthranilate synthase component I, N terminal region AMIR_RS28280 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28285 PF01502 Phosphoribosyl-AMP cyclohydrolase AMIR_RS28295 PF00977 Histidine biosynthesis protein AMIR_RS28300 PF02661 Fic/DOC family AMIR_RS28310 PF02861 Clp amino terminal domain AMIR_RS28315 PF00977 Histidine biosynthesis protein AMIR_RS28320 PF00117 Glutamine amidotransferase class-I AMIR_RS28330 PF02779 Transketolase, pyrimidine binding domain AMIR_RS28335 PF00456 Transketolase, thiamine diphosphate binding domain AMIR_RS28340 PF00376 MerR family regulatory protein AMIR_RS28340 PF09278 MerR, DNA binding AMIR_RS28345 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMIR_RS28350 PF00475 Imidazoleglycerol-phosphate dehydratase AMIR_RS28355 PF00155 Aminotransferase class I and II AMIR_RS28360 PF00815 Histidinol dehydrogenase AMIR_RS28365 PF00246 Zinc carboxypeptidase AMIR_RS28370 PF00266 Aminotransferase class-V AMIR_RS28375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS28380 PF00795 Carbon-nitrogen hydrolase AMIR_RS28385 PF05239 PRC-barrel domain AMIR_RS28390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIR_RS28390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMIR_RS28395 PF00890 FAD binding domain AMIR_RS28395 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS28400 PF02445 Quinolinate synthetase A protein AMIR_RS28405 PF00293 NUDIX domain AMIR_RS28410 PF02190 ATP-dependent protease La (LON) domain AMIR_RS28415 PF07690 Major Facilitator Superfamily AMIR_RS28420 PF07286 Protein of unknown function (DUF1445) AMIR_RS28435 PF04055 Radical SAM superfamily AMIR_RS28435 PF06968 Biotin and Thiamin Synthesis associated domain AMIR_RS28440 PF13500 AAA domain AMIR_RS28445 PF00462 Glutaredoxin AMIR_RS28455 PF00202 Aminotransferase class-III AMIR_RS28460 PF02811 PHP domain AMIR_RS28460 PF07733 Bacterial DNA polymerase III alpha subunit AMIR_RS28460 PF14579 Helix-hairpin-helix motif AMIR_RS28470 PF07690 Major Facilitator Superfamily AMIR_RS28475 PF00849 RNA pseudouridylate synthase AMIR_RS28480 PF01252 AMIR_RS28480 AMIR_RS28485 PF00266 Aminotransferase class-V AMIR_RS28490 PF00999 Sodium/hydrogen exchanger family AMIR_RS28490 PF02080 TrkA-C domain AMIR_RS28495 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28495 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AMIR_RS28505 PF02594 Uncharacterised ACR, YggU family COG1872 AMIR_RS28510 PF00133 tRNA synthetases class I (I, L, M and V) AMIR_RS28510 PF08264 Anticodon-binding domain of tRNA AMIR_RS28520 PF05103 DivIVA protein AMIR_RS28525 PF02325 AMIR_RS28525 AMIR_RS28530 PF04472 Protein of unknown function (DUF552) AMIR_RS28535 PF01168 Alanine racemase, N-terminal domain AMIR_RS28540 PF02578 Multi-copper polyphenol oxidoreductase laccase AMIR_RS28545 PF00091 Tubulin/FtsZ family, GTPase domain AMIR_RS28545 PF12327 FtsZ family, C-terminal domain AMIR_RS28550 PF03799 Cell division protein FtsQ AMIR_RS28550 PF08478 POTRA domain, FtsQ-type AMIR_RS28555 PF01225 Mur ligase family, catalytic domain AMIR_RS28555 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28555 PF08245 Mur ligase middle domain AMIR_RS28560 PF03033 Glycosyltransferase family 28 N-terminal domain AMIR_RS28560 PF04101 Glycosyltransferase family 28 C-terminal domain AMIR_RS28565 PF01098 AMIR_RS28565 AMIR_RS28585 PF08245 Mur ligase middle domain AMIR_RS28590 PF00953 Glycosyl transferase family 4 AMIR_RS28590 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMIR_RS28595 PF01225 Mur ligase family, catalytic domain AMIR_RS28595 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28595 PF08245 Mur ligase middle domain AMIR_RS28600 PF01225 Mur ligase family, catalytic domain AMIR_RS28600 PF02875 Mur ligase family, glutamate ligase domain AMIR_RS28600 PF08245 Mur ligase middle domain AMIR_RS28605 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS28605 PF03717 Penicillin-binding Protein dimerisation domain AMIR_RS28615 PF01795 MraW methylase family AMIR_RS28620 PF02381 MraZ protein AMIR_RS28625 PF07726 ATPase family associated with various cellular activities (AAA) AMIR_RS28630 PF01882 AMIR_RS28630 AMIR_RS28635 PF01841 Transglutaminase-like superfamily AMIR_RS28640 PF11239 AMIR_RS28640 AMIR_RS28655 PF00027 Cyclic nucleotide-binding domain AMIR_RS28655 PF13545 Crp-like helix-turn-helix domain AMIR_RS28660 PF00817 impB/mucB/samB family AMIR_RS28660 PF11798 IMS family HHH motif AMIR_RS28660 PF11799 impB/mucB/samB family C-terminal domain AMIR_RS28665 PF04909 Amidohydrolase AMIR_RS28670 PF00120 Glutamine synthetase, catalytic domain AMIR_RS28675 PF04542 Sigma-70 region 2 AMIR_RS28675 PF08281 Sigma-70, region 4 AMIR_RS28680 PF13489 Methyltransferase domain AMIR_RS28685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS28690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS28690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS28695 PF01180 Dihydroorotate dehydrogenase AMIR_RS28700 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28705 PF00106 short chain dehydrogenase AMIR_RS28710 PF00860 Permease family AMIR_RS28720 PF04012 AMIR_RS28720 AMIR_RS28725 PF13560 Helix-turn-helix domain AMIR_RS28730 PF02464 Competence-damaged protein AMIR_RS28735 PF01066 CDP-alcohol phosphatidyltransferase AMIR_RS28740 PF00919 Uncharacterized protein family UPF0004 AMIR_RS28740 PF04055 Radical SAM superfamily AMIR_RS28745 PF00583 Acetyltransferase (GNAT) family AMIR_RS28750 PF13411 MerR HTH family regulatory protein AMIR_RS28755 PF09056 Prokaryotic phospholipase A2 AMIR_RS28760 PF01580 FtsK/SpoIIIE family AMIR_RS28760 PF09397 Ftsk gamma domain AMIR_RS28760 PF13491 AMIR_RS28760 AMIR_RS28765 PF01553 Acyltransferase AMIR_RS28770 PF00753 Metallo-beta-lactamase superfamily AMIR_RS28770 PF07521 RNA-metabolising metallo-beta-lactamase AMIR_RS28775 PF00701 Dihydrodipicolinate synthetase family AMIR_RS28785 PF00069 Protein kinase domain AMIR_RS28795 PF02511 Thymidylate synthase complementing protein AMIR_RS28800 PF05534 AMIR_RS28800 AMIR_RS28805 PF13349 AMIR_RS28805 AMIR_RS28810 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS28820 PF00248 Aldo/keto reductase family AMIR_RS28825 PF06224 AMIR_RS28825 AMIR_RS28830 PF00583 Acetyltransferase (GNAT) family AMIR_RS28845 PF01113 Dihydrodipicolinate reductase, N-terminus AMIR_RS28845 PF05173 Dihydrodipicolinate reductase, C-terminus AMIR_RS28850 PF00675 Insulinase (Peptidase family M16) AMIR_RS28850 PF05193 Peptidase M16 inactive domain AMIR_RS28855 PF00013 KH domain AMIR_RS28855 PF00575 S1 RNA binding domain AMIR_RS28855 PF01138 3' exoribonuclease family, domain 1 AMIR_RS28855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMIR_RS28860 PF00312 Ribosomal protein S15 AMIR_RS28865 PF02834 LigT like Phosphoesterase AMIR_RS28875 PF01687 Riboflavin kinase AMIR_RS28875 PF06574 FAD synthetase AMIR_RS28880 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMIR_RS28880 PF09142 tRNA Pseudouridine synthase II, C terminal AMIR_RS28880 PF16198 AMIR_RS28880 AMIR_RS28885 PF07690 Major Facilitator Superfamily AMIR_RS28890 PF01554 MatE AMIR_RS28895 PF01368 DHH family AMIR_RS28895 PF02272 DHHA1 domain AMIR_RS28900 PF02033 Ribosome-binding factor A AMIR_RS28905 PF04456 Protein of unknown function (DUF503) AMIR_RS28910 PF00009 Elongation factor Tu GTP binding domain AMIR_RS28910 PF04760 Translation initiation factor IF-2, N-terminal region AMIR_RS28910 PF11987 Translation-initiation factor 2 AMIR_RS28915 PF08529 NusA N-terminal domain AMIR_RS28915 PF13184 NusA-like KH domain AMIR_RS28920 PF02576 Uncharacterised BCR, YhbC family COG0779 AMIR_RS28930 PF14530 Domain of unknown function (DUF4439) AMIR_RS28940 PF00266 Aminotransferase class-V AMIR_RS28945 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS28950 PF01894 Uncharacterised protein family UPF0047 AMIR_RS28965 PF12710 haloacid dehalogenase-like hydrolase AMIR_RS28970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIR_RS28970 PF03129 Anticodon binding domain AMIR_RS28970 PF04073 Aminoacyl-tRNA editing domain AMIR_RS28980 PF03883 AMIR_RS28980 AMIR_RS28985 PF00027 Cyclic nucleotide-binding domain AMIR_RS28985 PF13545 Crp-like helix-turn-helix domain AMIR_RS28990 PF00027 Cyclic nucleotide-binding domain AMIR_RS28990 PF13545 Crp-like helix-turn-helix domain AMIR_RS28995 PF01163 RIO1 family AMIR_RS29000 PF00270 DEAD/DEAH box helicase AMIR_RS29000 PF00271 Helicase conserved C-terminal domain AMIR_RS29005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS29005 PF13241 Putative NAD(P)-binding AMIR_RS29010 PF00089 Trypsin AMIR_RS29015 PF01890 Cobalamin synthesis G C-terminus AMIR_RS29015 PF11760 Cobalamin synthesis G N-terminal AMIR_RS29025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS29030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS29030 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS29035 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMIR_RS29040 PF01078 Magnesium chelatase, subunit ChlI AMIR_RS29040 PF13519 von Willebrand factor type A domain AMIR_RS29045 PF00106 short chain dehydrogenase AMIR_RS29050 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS29050 PF13305 WHG domain AMIR_RS29055 PF00155 Aminotransferase class I and II AMIR_RS29060 PF13673 Acetyltransferase (GNAT) domain AMIR_RS29065 PF00089 Trypsin AMIR_RS29070 PF01810 AMIR_RS29070 AMIR_RS29075 PF00089 Trypsin AMIR_RS29080 PF00089 Trypsin AMIR_RS29085 PF01435 Peptidase family M48 AMIR_RS29090 PF12146 Putative lysophospholipase AMIR_RS29095 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS29100 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS29100 PF02190 ATP-dependent protease La (LON) domain AMIR_RS29100 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIR_RS29105 PF04672 S-adenosyl methyltransferase AMIR_RS29110 PF01734 Patatin-like phospholipase AMIR_RS29115 PF01522 Polysaccharide deacetylase AMIR_RS29120 PF01161 Phosphatidylethanolamine-binding protein AMIR_RS29125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS29125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS29130 PF07690 Major Facilitator Superfamily AMIR_RS29135 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS29135 PF07729 FCD domain AMIR_RS29140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS29140 PF03466 LysR substrate binding domain AMIR_RS29145 PF00892 EamA-like transporter family AMIR_RS29150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS29150 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS29160 PF00557 Metallopeptidase family M24 AMIR_RS29165 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS29165 PF05223 NTF2-like N-terminal transpeptidase domain AMIR_RS29170 PF08445 FR47-like protein AMIR_RS29170 PF13312 AMIR_RS29170 AMIR_RS29175 PF04551 GcpE protein AMIR_RS29180 PF02163 Peptidase family M50 AMIR_RS29185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMIR_RS29185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMIR_RS29185 PF13288 DXP reductoisomerase C-terminal domain AMIR_RS29190 PF04226 AMIR_RS29190 AMIR_RS29200 PF00072 Response regulator receiver domain AMIR_RS29200 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS29205 PF07730 Histidine kinase AMIR_RS29210 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS29215 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS29220 PF13416 Bacterial extracellular solute-binding protein AMIR_RS29225 PF00005 ABC transporter AMIR_RS29225 PF08402 TOBE domain AMIR_RS29230 PF10939 AMIR_RS29230 AMIR_RS29235 PF00069 Protein kinase domain AMIR_RS29245 PF04055 Radical SAM superfamily AMIR_RS29250 PF03551 Transcriptional regulator PadR-like family AMIR_RS29255 PF00248 Aldo/keto reductase family AMIR_RS29260 PF08241 Methyltransferase domain AMIR_RS29265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS29270 PF01148 Cytidylyltransferase family AMIR_RS29275 PF01765 Ribosome recycling factor AMIR_RS29280 PF00696 Amino acid kinase family AMIR_RS29285 PF00889 Elongation factor TS AMIR_RS29290 PF00318 Ribosomal protein S2 AMIR_RS29300 PF04542 Sigma-70 region 2 AMIR_RS29300 PF04545 Sigma-70, region 4 AMIR_RS29305 PF00589 Phage integrase family AMIR_RS29305 PF02899 Phage integrase, N-terminal SAM-like domain AMIR_RS29310 PF02481 DNA recombination-mediator protein A AMIR_RS29315 PF01078 Magnesium chelatase, subunit ChlI AMIR_RS29315 PF13335 AMIR_RS29315 AMIR_RS29315 PF13541 Subunit ChlI of Mg-chelatase AMIR_RS29320 PF02021 Uncharacterised protein family UPF0102 AMIR_RS29325 PF10611 AMIR_RS29325 AMIR_RS29330 PF01351 Ribonuclease HII AMIR_RS29335 PF00717 Peptidase S24-like AMIR_RS29335 PF10502 Signal peptidase, peptidase S26 AMIR_RS29340 PF00717 Peptidase S24-like AMIR_RS29340 PF10502 Signal peptidase, peptidase S26 AMIR_RS29345 PF01245 Ribosomal protein L19 AMIR_RS29350 PF01746 tRNA (Guanine-1)-methyltransferase AMIR_RS29355 PF01782 RimM N-terminal domain AMIR_RS29355 PF05239 PRC-barrel domain AMIR_RS29360 PF13083 KH domain AMIR_RS29365 PF00886 Ribosomal protein S16 AMIR_RS29370 PF03746 LamB/YcsF family AMIR_RS29375 PF02517 CAAX protease self-immunity AMIR_RS29380 PF01979 Amidohydrolase family AMIR_RS29385 PF00448 SRP54-type protein, GTPase domain AMIR_RS29385 PF02881 SRP54-type protein, helical bundle domain AMIR_RS29385 PF02978 Signal peptide binding domain AMIR_RS29390 PF13671 AAA domain AMIR_RS29395 PF01966 HD domain AMIR_RS29400 PF00543 Nitrogen regulatory protein P-II AMIR_RS29405 PF00909 Ammonium Transporter Family AMIR_RS29410 PF00561 alpha/beta hydrolase fold AMIR_RS29410 PF08386 TAP-like protein AMIR_RS29415 PF03561 Allantoicase repeat AMIR_RS29420 PF01979 Amidohydrolase family AMIR_RS29425 PF09349 OHCU decarboxylase AMIR_RS29430 PF01014 Uricase AMIR_RS29435 PF14430 AMIR_RS29435 AMIR_RS29445 PF01274 Malate synthase AMIR_RS29450 PF01614 Bacterial transcriptional regulator AMIR_RS29450 PF09339 IclR helix-turn-helix domain AMIR_RS29460 PF00448 SRP54-type protein, GTPase domain AMIR_RS29460 PF02881 SRP54-type protein, helical bundle domain AMIR_RS29465 PF03702 Uncharacterised protein family (UPF0075) AMIR_RS29470 PF00474 Sodium:solute symporter family AMIR_RS29475 PF13508 Acetyltransferase (GNAT) domain AMIR_RS29480 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS29490 PF01553 Acyltransferase AMIR_RS29495 PF02463 RecF/RecN/SMC N terminal domain AMIR_RS29495 PF06470 SMC proteins Flexible Hinge Domain AMIR_RS29500 PF13490 Putative zinc-finger AMIR_RS29505 PF04542 Sigma-70 region 2 AMIR_RS29505 PF04545 Sigma-70, region 4 AMIR_RS29510 PF00708 Acylphosphatase AMIR_RS29530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS29535 PF00072 Response regulator receiver domain AMIR_RS29535 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS29540 PF01047 MarR family AMIR_RS29545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS29545 PF06827 Zinc finger found in FPG and IleRS AMIR_RS29545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIR_RS29555 PF00035 Double-stranded RNA binding motif AMIR_RS29555 PF14622 Ribonuclease-III-like AMIR_RS29560 PF01783 Ribosomal L32p protein family AMIR_RS29565 PF02620 AMIR_RS29565 AMIR_RS29575 PF01467 Cytidylyltransferase AMIR_RS29580 PF03602 Conserved hypothetical protein 95 AMIR_RS29585 PF12706 Beta-lactamase superfamily domain AMIR_RS29590 PF14430 AMIR_RS29590 AMIR_RS29595 PF14428 AMIR_RS29595 AMIR_RS29600 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMIR_RS29600 PF00364 Biotin-requiring enzyme AMIR_RS29600 PF00682 HMGL-like AMIR_RS29600 PF02436 Conserved carboxylase domain AMIR_RS29600 PF02785 Biotin carboxylase C-terminal domain AMIR_RS29600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS29620 PF00270 DEAD/DEAH box helicase AMIR_RS29620 PF00271 Helicase conserved C-terminal domain AMIR_RS29620 PF17191 AMIR_RS29620 AMIR_RS29625 PF02734 DAK2 domain AMIR_RS29625 PF13684 Dihydroxyacetone kinase family AMIR_RS29630 PF00830 Ribosomal L28 family AMIR_RS29635 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS29640 PF12802 MarR family AMIR_RS29645 PF03167 Uracil DNA glycosylase superfamily AMIR_RS29650 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS29650 PF14602 Hexapeptide repeat of succinyl-transferase AMIR_RS29655 PF00583 Acetyltransferase (GNAT) family AMIR_RS29660 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS29665 PF01037 AsnC family AMIR_RS29670 PF12028 AMIR_RS29670 AMIR_RS29675 PF01820 D-ala D-ala ligase N-terminus AMIR_RS29675 PF07478 D-ala D-ala ligase C-terminus AMIR_RS29680 PF05995 Cysteine dioxygenase type I AMIR_RS29685 PF12900 Pyridoxamine 5'-phosphate oxidase AMIR_RS29690 PF00155 Aminotransferase class I and II AMIR_RS29690 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS29695 PF14430 AMIR_RS29695 AMIR_RS29715 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS29720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMIR_RS29720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMIR_RS29725 PF01553 Acyltransferase AMIR_RS29730 PF01983 Guanylyl transferase CofC like AMIR_RS29740 PF02503 Polyphosphate kinase middle domain AMIR_RS29740 PF13089 Polyphosphate kinase N-terminal domain AMIR_RS29740 PF13090 Polyphosphate kinase C-terminal domain AMIR_RS29745 PF00293 NUDIX domain AMIR_RS29745 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS29750 PF00216 Bacterial DNA-binding protein AMIR_RS29755 PF00694 Aconitase C-terminal domain AMIR_RS29760 PF00330 Aconitase family (aconitate hydratase) AMIR_RS29765 PF01614 Bacterial transcriptional regulator AMIR_RS29765 PF09339 IclR helix-turn-helix domain AMIR_RS29785 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS29790 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMIR_RS29795 PF01494 FAD binding domain AMIR_RS29800 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIR_RS29800 PF10370 Domain of unknown function (DUF2437) AMIR_RS29810 PF00682 HMGL-like AMIR_RS29810 PF08502 LeuA allosteric (dimerisation) domain AMIR_RS29815 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIR_RS29820 PF00082 Subtilase family AMIR_RS29825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS29825 PF01842 ACT domain AMIR_RS29825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS29830 PF04149 AMIR_RS29830 AMIR_RS29835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMIR_RS29835 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMIR_RS29840 PF01842 ACT domain AMIR_RS29840 PF10369 Small subunit of acetolactate synthase AMIR_RS29845 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS29845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS29845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS29850 PF10756 AMIR_RS29850 AMIR_RS29855 PF07884 Vitamin K epoxide reductase family AMIR_RS29860 PF00920 Dehydratase family AMIR_RS29875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS29880 PF00561 alpha/beta hydrolase fold AMIR_RS29885 PF07995 Glucose / Sorbosone dehydrogenase AMIR_RS29890 PF12770 AMIR_RS29890 AMIR_RS29900 PF02637 GatB domain AMIR_RS29900 PF02934 GatB/GatE catalytic domain AMIR_RS29910 PF01425 Amidase AMIR_RS29915 PF02686 Glu-tRNAGln amidotransferase C subunit AMIR_RS29925 PF04434 AMIR_RS29925 AMIR_RS29930 PF00533 BRCA1 C Terminus (BRCT) domain AMIR_RS29930 PF01653 NAD-dependent DNA ligase adenylation domain AMIR_RS29930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMIR_RS29930 PF03120 NAD-dependent DNA ligase OB-fold domain AMIR_RS29930 PF12826 Helix-hairpin-helix motif AMIR_RS29940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS29940 PF03466 LysR substrate binding domain AMIR_RS29945 PF03601 AMIR_RS29945 AMIR_RS29950 PF01717 Cobalamin-independent synthase, Catalytic domain AMIR_RS29965 PF03054 tRNA methyl transferase AMIR_RS29970 PF00266 Aminotransferase class-V AMIR_RS29975 PF07690 Major Facilitator Superfamily AMIR_RS29980 PF01553 Acyltransferase AMIR_RS29985 PF13444 Acetyltransferase (GNAT) domain AMIR_RS29990 PF00766 Electron transfer flavoprotein FAD-binding domain AMIR_RS29990 PF01012 Electron transfer flavoprotein domain AMIR_RS29995 PF01012 Electron transfer flavoprotein domain AMIR_RS30000 PF02645 Uncharacterised protein, DegV family COG1307 AMIR_RS30015 PF08241 Methyltransferase domain AMIR_RS30020 PF03065 Glycosyl hydrolase family 57 AMIR_RS30020 PF09210 Domain of unknown function (DUF1957) AMIR_RS30025 PF00534 Glycosyl transferases group 1 AMIR_RS30025 PF13439 Glycosyltransferase Family 4 AMIR_RS30035 PF00102 Protein-tyrosine phosphatase AMIR_RS30040 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS30045 PF01156 Inosine-uridine preferring nucleoside hydrolase AMIR_RS30055 PF08241 Methyltransferase domain AMIR_RS30060 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS30065 PF00005 ABC transporter AMIR_RS30070 PF00128 Alpha amylase, catalytic domain AMIR_RS30070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS30075 PF05995 Cysteine dioxygenase type I AMIR_RS30080 PF00581 Rhodanese-like domain AMIR_RS30090 PF00343 Carbohydrate phosphorylase AMIR_RS30090 PF11897 AMIR_RS30090 AMIR_RS30095 PF00128 Alpha amylase, catalytic domain AMIR_RS30095 PF11896 Domain of unknown function (DUF3416) AMIR_RS30100 PF00128 Alpha amylase, catalytic domain AMIR_RS30100 PF16657 AMIR_RS30100 AMIR_RS30110 PF00128 Alpha amylase, catalytic domain AMIR_RS30110 PF02806 Alpha amylase, C-terminal all-beta domain AMIR_RS30110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIR_RS30115 PF04228 AMIR_RS30115 AMIR_RS30125 PF04228 AMIR_RS30125 AMIR_RS30130 PF00085 Thioredoxin AMIR_RS30130 PF14561 Tetratricopeptide repeat AMIR_RS30140 PF01910 Domain of unknown function DUF77 AMIR_RS30145 PF01047 MarR family AMIR_RS30150 PF01636 Phosphotransferase enzyme family AMIR_RS30155 PF12823 AMIR_RS30155 AMIR_RS30160 PF00005 ABC transporter AMIR_RS30170 PF13359 AMIR_RS30170 AMIR_RS30170 PF13613 AMIR_RS30170 AMIR_RS30185 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS30185 PF13377 Periplasmic binding protein-like domain AMIR_RS30195 PF00005 ABC transporter AMIR_RS30200 PF02653 AMIR_RS30200 AMIR_RS30205 PF13407 Periplasmic binding protein domain AMIR_RS30215 PF00561 alpha/beta hydrolase fold AMIR_RS30215 PF08386 TAP-like protein AMIR_RS30220 PF08386 TAP-like protein AMIR_RS30225 PF00072 Response regulator receiver domain AMIR_RS30225 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS30230 PF01590 GAF domain AMIR_RS30230 PF07730 Histidine kinase AMIR_RS30230 PF13492 GAF domain AMIR_RS30235 PF12900 Pyridoxamine 5'-phosphate oxidase AMIR_RS30240 PF00797 N-acetyltransferase AMIR_RS30255 PF00108 Thiolase, N-terminal domain AMIR_RS30255 PF02803 Thiolase, C-terminal domain AMIR_RS30260 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS30270 PF12697 Alpha/beta hydrolase family AMIR_RS30275 PF13302 Acetyltransferase (GNAT) domain AMIR_RS30285 PF09723 AMIR_RS30285 AMIR_RS30290 PF12079 AMIR_RS30290 AMIR_RS30295 PF00381 PTS HPr component phosphorylation site AMIR_RS30295 PF03610 PTS system fructose IIA component AMIR_RS30300 PF02734 DAK2 domain AMIR_RS30305 PF02733 Dak1 domain AMIR_RS30310 PF00171 Aldehyde dehydrogenase family AMIR_RS30325 PF00474 Sodium:solute symporter family AMIR_RS30340 PF13560 Helix-turn-helix domain AMIR_RS30345 PF04149 AMIR_RS30345 AMIR_RS30355 PF01939 Protein of unknown function DUF91 AMIR_RS30360 PF00293 NUDIX domain AMIR_RS30365 PF00583 Acetyltransferase (GNAT) family AMIR_RS30370 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS30375 PF00857 Isochorismatase family AMIR_RS30395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS30400 PF01923 Cobalamin adenosyltransferase AMIR_RS30405 PF10739 AMIR_RS30405 AMIR_RS30410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMIR_RS30415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30415 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS30420 PF00231 ATP synthase AMIR_RS30425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30425 PF00306 ATP synthase alpha/beta chain, C terminal domain AMIR_RS30425 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIR_RS30430 PF00213 ATP synthase delta (OSCP) subunit AMIR_RS30435 PF00430 ATP synthase B/B' CF(0) AMIR_RS30440 PF00137 ATP synthase subunit C AMIR_RS30445 PF00119 ATP synthase A chain AMIR_RS30460 PF00953 Glycosyl transferase family 4 AMIR_RS30465 PF01300 Telomere recombination AMIR_RS30470 PF05175 Methyltransferase small domain AMIR_RS30475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS30475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS30480 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal AMIR_RS30490 PF00472 RF-1 domain AMIR_RS30490 PF03462 PCRF domain AMIR_RS30495 PF01197 Ribosomal protein L31 AMIR_RS30505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIR_RS30505 PF07497 Rho termination factor, RNA-binding domain AMIR_RS30505 PF07498 Rho termination factor, N-terminal domain AMIR_RS30510 PF00288 GHMP kinases N terminal domain AMIR_RS30510 PF08544 GHMP kinases C terminal AMIR_RS30515 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS30520 PF00742 Homoserine dehydrogenase AMIR_RS30520 PF01842 ACT domain AMIR_RS30520 PF03447 Homoserine dehydrogenase, NAD binding domain AMIR_RS30525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIR_RS30525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIR_RS30530 PF00750 tRNA synthetases class I (R) AMIR_RS30530 PF03485 Arginyl tRNA synthetase N terminal domain AMIR_RS30530 PF05746 DALR anticodon binding domain AMIR_RS30535 PF11303 AMIR_RS30535 AMIR_RS30540 PF03713 Domain of unknown function (DUF305) AMIR_RS30545 PF00754 F5/8 type C domain AMIR_RS30545 PF07971 Glycosyl hydrolase family 92 AMIR_RS30550 PF01545 Cation efflux family AMIR_RS30560 PF03235 AMIR_RS30560 AMIR_RS30565 PF00150 Cellulase (glycosyl hydrolase family 5) AMIR_RS30575 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30575 PF03704 Bacterial transcriptional activator domain AMIR_RS30575 PF13191 AAA ATPase domain AMIR_RS30580 PF00561 alpha/beta hydrolase fold AMIR_RS30585 PF01381 Helix-turn-helix AMIR_RS30605 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMIR_RS30610 PF06445 GyrI-like small molecule binding domain AMIR_RS30615 PF00296 Luciferase-like monooxygenase AMIR_RS30620 PF03193 Protein of unknown function, DUF258 AMIR_RS30625 PF00881 Nitroreductase family AMIR_RS30630 PF00248 Aldo/keto reductase family AMIR_RS30635 PF13377 Periplasmic binding protein-like domain AMIR_RS30645 PF02065 Melibiase AMIR_RS30645 PF16875 AMIR_RS30645 AMIR_RS30660 PF00005 ABC transporter AMIR_RS30660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIR_RS30665 PF00005 ABC transporter AMIR_RS30665 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS30670 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS30675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIR_RS30680 PF00480 ROK family AMIR_RS30685 PF00296 Luciferase-like monooxygenase AMIR_RS30690 PF00296 Luciferase-like monooxygenase AMIR_RS30695 PF01266 FAD dependent oxidoreductase AMIR_RS30700 PF05175 Methyltransferase small domain AMIR_RS30705 PF04542 Sigma-70 region 2 AMIR_RS30705 PF08281 Sigma-70, region 4 AMIR_RS30710 PF03795 YCII-related domain AMIR_RS30715 PF12833 Helix-turn-helix domain AMIR_RS30725 PF13714 Phosphoenolpyruvate phosphomutase AMIR_RS30730 PF13602 Zinc-binding dehydrogenase AMIR_RS30735 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS30740 PF12840 Helix-turn-helix domain AMIR_RS30745 PF13672 Protein phosphatase 2C AMIR_RS30750 PF00480 ROK family AMIR_RS30750 PF12802 MarR family AMIR_RS30755 PF00144 Beta-lactamase AMIR_RS30760 PF00553 Cellulose binding domain AMIR_RS30760 PF00704 Glycosyl hydrolases family 18 AMIR_RS30765 PF13538 UvrD-like helicase C-terminal domain AMIR_RS30765 PF13604 AAA domain AMIR_RS30765 PF14490 Helix-hairpin-helix containing domain AMIR_RS30765 PF14520 Helix-hairpin-helix domain AMIR_RS30770 PF00072 Response regulator receiver domain AMIR_RS30770 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30775 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS30775 PF00672 HAMP domain AMIR_RS30775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS30780 PF13777 AMIR_RS30780 AMIR_RS30785 PF00924 Mechanosensitive ion channel AMIR_RS30795 PF00082 Subtilase family AMIR_RS30800 PF00890 FAD binding domain AMIR_RS30805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS30805 PF03466 LysR substrate binding domain AMIR_RS30810 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS30815 PF01613 Flavin reductase like domain AMIR_RS30820 PF14011 EspG family AMIR_RS30825 PF00823 PPE family AMIR_RS30835 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS30835 PF00931 NB-ARC domain AMIR_RS30835 PF03704 Bacterial transcriptional activator domain AMIR_RS30835 PF13424 Tetratricopeptide repeat AMIR_RS30845 PF13454 FAD-NAD(P)-binding AMIR_RS30850 PF00563 EAL domain AMIR_RS30850 PF00990 GGDEF domain AMIR_RS30850 PF08448 PAS fold AMIR_RS30855 PF13365 Trypsin-like peptidase domain AMIR_RS30860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS30860 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS30865 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS30875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS30875 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS30875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS30880 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMIR_RS30880 PF00364 Biotin-requiring enzyme AMIR_RS30880 PF02785 Biotin carboxylase C-terminal domain AMIR_RS30880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS30885 PF01039 Carboxyl transferase domain AMIR_RS30890 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS30895 PF01757 AMIR_RS30895 AMIR_RS30895 PF09056 Prokaryotic phospholipase A2 AMIR_RS30900 PF06259 Alpha/beta hydrolase AMIR_RS30905 PF00072 Response regulator receiver domain AMIR_RS30905 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS30910 PF07730 Histidine kinase AMIR_RS30920 PF00041 Fibronectin type III domain AMIR_RS30920 PF00553 Cellulose binding domain AMIR_RS30925 PF00561 alpha/beta hydrolase fold AMIR_RS30930 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIR_RS30935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS30935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS30955 PF00255 Glutathione peroxidase AMIR_RS30960 PF03313 AMIR_RS30960 AMIR_RS30960 PF03315 Serine dehydratase beta chain AMIR_RS30965 PF01597 Glycine cleavage H-protein AMIR_RS30970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS30970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS30980 PF00005 ABC transporter AMIR_RS30985 PF12679 AMIR_RS30985 AMIR_RS30990 PF00005 ABC transporter AMIR_RS30990 PF00664 ABC transporter transmembrane region AMIR_RS30995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS30995 PF00676 Dehydrogenase E1 component AMIR_RS30995 PF02779 Transketolase, pyrimidine binding domain AMIR_RS30995 PF16078 AMIR_RS30995 AMIR_RS30995 PF16870 AMIR_RS30995 AMIR_RS31005 PF14016 AMIR_RS31005 AMIR_RS31010 PF00248 Aldo/keto reductase family AMIR_RS31015 PF06114 Domain of unknown function (DUF955) AMIR_RS31015 PF13560 Helix-turn-helix domain AMIR_RS31025 PF00931 NB-ARC domain AMIR_RS31025 PF13424 Tetratricopeptide repeat AMIR_RS31040 PF01979 Amidohydrolase family AMIR_RS31045 PF01979 Amidohydrolase family AMIR_RS31050 PF01546 Peptidase family M20/M25/M40 AMIR_RS31055 PF01175 Urocanase AMIR_RS31060 PF00221 Aromatic amino acid lyase AMIR_RS31065 PF01614 Bacterial transcriptional regulator AMIR_RS31065 PF09339 IclR helix-turn-helix domain AMIR_RS31070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMIR_RS31075 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS31080 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS31085 PF00005 ABC transporter AMIR_RS31090 PF01861 Protein of unknown function DUF43 AMIR_RS31110 PF10824 Protein of unknown function (DUF2580) AMIR_RS31115 PF02575 YbaB/EbfC DNA-binding family AMIR_RS31120 PF00563 EAL domain AMIR_RS31120 PF00990 GGDEF domain AMIR_RS31120 PF08447 PAS fold AMIR_RS31120 PF08448 PAS fold AMIR_RS31125 PF00390 Malic enzyme, N-terminal domain AMIR_RS31125 PF03949 Malic enzyme, NAD binding domain AMIR_RS31130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIR_RS31135 PF00717 Peptidase S24-like AMIR_RS31140 PF09055 Nickel-containing superoxide dismutase AMIR_RS31145 PF12102 Domain of unknown function (DUF3578) AMIR_RS31145 PF13020 AMIR_RS31145 AMIR_RS31150 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS31155 PF04672 S-adenosyl methyltransferase AMIR_RS31165 PF00089 Trypsin AMIR_RS31175 PF00781 Diacylglycerol kinase catalytic domain AMIR_RS31180 PF02467 AMIR_RS31180 AMIR_RS31185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31185 PF07568 AMIR_RS31185 AMIR_RS31185 PF08448 PAS fold AMIR_RS31185 PF12282 Signal transduction histidine kinase AMIR_RS31190 PF13490 Putative zinc-finger AMIR_RS31195 PF04542 Sigma-70 region 2 AMIR_RS31195 PF08281 Sigma-70, region 4 AMIR_RS31200 PF04073 Aminoacyl-tRNA editing domain AMIR_RS31210 PF02586 Uncharacterised ACR, COG2135 AMIR_RS31215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIR_RS31220 PF03193 Protein of unknown function, DUF258 AMIR_RS31225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIR_RS31235 PF03007 AMIR_RS31235 AMIR_RS31235 PF06974 AMIR_RS31235 AMIR_RS31245 PF00588 SpoU rRNA Methylase family AMIR_RS31245 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS31250 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS31260 PF01043 SecA preprotein cross-linking domain AMIR_RS31260 PF07516 SecA Wing and Scaffold domain AMIR_RS31260 PF07517 SecA DEAD-like domain AMIR_RS31265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMIR_RS31265 PF16321 AMIR_RS31265 AMIR_RS31275 PF10646 AMIR_RS31275 AMIR_RS31275 PF10647 AMIR_RS31275 AMIR_RS31280 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS31280 PF00672 HAMP domain AMIR_RS31280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31285 PF00072 Response regulator receiver domain AMIR_RS31285 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31290 PF02223 Thymidylate kinase AMIR_RS31295 PF04149 AMIR_RS31295 AMIR_RS31300 PF13560 Helix-turn-helix domain AMIR_RS31310 PF00733 Asparagine synthase AMIR_RS31315 PF13471 AMIR_RS31315 AMIR_RS31320 PF13302 Acetyltransferase (GNAT) domain AMIR_RS31335 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS31335 PF05221 S-adenosyl-L-homocysteine hydrolase AMIR_RS31340 PF13520 Amino acid permease AMIR_RS31345 PF01545 Cation efflux family AMIR_RS31350 PF01238 Phosphomannose isomerase type I AMIR_RS31355 PF10432 Bacterial phospho-glucose isomerase C-terminal region AMIR_RS31360 PF03966 Trm112p-like protein AMIR_RS31365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS31365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS31365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS31365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS31370 PF12005 AMIR_RS31370 AMIR_RS31375 PF06262 Possibl zinc metallo-peptidase AMIR_RS31380 PF13641 Glycosyltransferase like family 2 AMIR_RS31385 PF02467 AMIR_RS31385 AMIR_RS31395 PF01933 Uncharacterised protein family UPF0052 AMIR_RS31400 PF00881 Nitroreductase family AMIR_RS31400 PF01996 F420-0:Gamma-glutamyl ligase AMIR_RS31405 PF00293 NUDIX domain AMIR_RS31415 PF00132 Bacterial transferase hexapeptide (six repeats) AMIR_RS31415 PF00483 Nucleotidyl transferase AMIR_RS31425 PF00535 Glycosyl transferase family 2 AMIR_RS31430 PF00534 Glycosyl transferases group 1 AMIR_RS31430 PF13439 Glycosyltransferase Family 4 AMIR_RS31435 PF00534 Glycosyl transferases group 1 AMIR_RS31435 PF13439 Glycosyltransferase Family 4 AMIR_RS31440 PF00535 Glycosyl transferase family 2 AMIR_RS31450 PF13641 Glycosyltransferase like family 2 AMIR_RS31450 PF13692 Glycosyl transferases group 1 AMIR_RS31455 PF13439 Glycosyltransferase Family 4 AMIR_RS31455 PF13692 Glycosyl transferases group 1 AMIR_RS31460 PF04321 RmlD substrate binding domain AMIR_RS31465 PF16363 AMIR_RS31465 AMIR_RS31470 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS31470 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS31475 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS31485 PF07681 AMIR_RS31485 AMIR_RS31490 PF12840 Helix-turn-helix domain AMIR_RS31500 PF13560 Helix-turn-helix domain AMIR_RS31510 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS31525 PF01580 FtsK/SpoIIIE family AMIR_RS31535 PF12728 Helix-turn-helix domain AMIR_RS31540 PF00589 Phage integrase family AMIR_RS31540 PF14659 Phage integrase, N-terminal SAM-like domain AMIR_RS31545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS31545 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS31545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS31550 PF00731 AIR carboxylase AMIR_RS31555 PF02222 ATP-grasp domain AMIR_RS31565 PF00005 ABC transporter AMIR_RS31570 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS31585 PF04149 AMIR_RS31585 AMIR_RS31590 PF14430 AMIR_RS31590 AMIR_RS31605 PF04138 AMIR_RS31605 AMIR_RS31610 PF00459 Inositol monophosphatase family AMIR_RS31615 PF00072 Response regulator receiver domain AMIR_RS31615 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS31620 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS31620 PF00672 HAMP domain AMIR_RS31620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS31650 PF02575 YbaB/EbfC DNA-binding family AMIR_RS31655 PF00682 HMGL-like AMIR_RS31660 PF03703 AMIR_RS31660 AMIR_RS31665 PF02237 Biotin protein ligase C terminal domain AMIR_RS31665 PF03099 Biotin/lipoate A/B protein ligase family AMIR_RS31670 PF01039 Carboxyl transferase domain AMIR_RS31675 PF13822 AMIR_RS31675 AMIR_RS31685 PF02545 Maf-like protein AMIR_RS31690 PF00375 Sodium:dicarboxylate symporter family AMIR_RS31700 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMIR_RS31700 PF00364 Biotin-requiring enzyme AMIR_RS31700 PF02785 Biotin carboxylase C-terminal domain AMIR_RS31700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIR_RS31705 PF08044 AMIR_RS31705 AMIR_RS31715 PF12079 AMIR_RS31715 AMIR_RS31725 PF00823 PPE family AMIR_RS31730 PF14011 EspG family AMIR_RS31735 PF13772 AIG2-like family AMIR_RS31740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIR_RS31740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS31750 PF00072 Response regulator receiver domain AMIR_RS31750 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS31755 PF07730 Histidine kinase AMIR_RS31760 PF00005 ABC transporter AMIR_RS31770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIR_RS31770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIR_RS31775 PF00230 Major intrinsic protein AMIR_RS31780 PF01266 FAD dependent oxidoreductase AMIR_RS31780 PF16901 AMIR_RS31780 AMIR_RS31790 PF15588 AMIR_RS31790 AMIR_RS31795 PF01546 Peptidase family M20/M25/M40 AMIR_RS31800 PF01546 Peptidase family M20/M25/M40 AMIR_RS31800 PF07687 Peptidase dimerisation domain AMIR_RS31810 PF03308 ArgK protein AMIR_RS31815 PF01642 Methylmalonyl-CoA mutase AMIR_RS31815 PF02310 B12 binding domain AMIR_RS31820 PF01642 Methylmalonyl-CoA mutase AMIR_RS31825 PF00069 Protein kinase domain AMIR_RS31830 PF01048 Phosphorylase superfamily AMIR_RS31835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS31835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS31835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS31835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS31850 PF13411 MerR HTH family regulatory protein AMIR_RS31860 PF01402 Ribbon-helix-helix protein, copG family AMIR_RS31865 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS31865 PF13305 WHG domain AMIR_RS31870 PF14681 Uracil phosphoribosyltransferase AMIR_RS31875 PF00805 Pentapeptide repeats (8 copies) AMIR_RS31875 PF05729 NACHT domain AMIR_RS31875 PF13365 Trypsin-like peptidase domain AMIR_RS31880 PF00149 Calcineurin-like phosphoesterase AMIR_RS31880 PF00400 WD domain, G-beta repeat AMIR_RS31880 PF00805 Pentapeptide repeats (8 copies) AMIR_RS31880 PF05729 NACHT domain AMIR_RS31885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS31895 PF13560 Helix-turn-helix domain AMIR_RS31900 PF08044 AMIR_RS31900 AMIR_RS31900 PF09922 Cell wall-active antibiotics response protein (DUF2154) AMIR_RS31905 PF00931 NB-ARC domain AMIR_RS31905 PF13424 Tetratricopeptide repeat AMIR_RS31930 PF00877 NlpC/P60 family AMIR_RS31950 PF00962 Adenosine/AMP deaminase AMIR_RS31965 PF00591 Glycosyl transferase family, a/b domain AMIR_RS31965 PF02885 Glycosyl transferase family, helical bundle domain AMIR_RS31965 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS31970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIR_RS31975 PF02653 AMIR_RS31975 AMIR_RS31980 PF02653 AMIR_RS31980 AMIR_RS31985 PF00005 ABC transporter AMIR_RS31990 PF02608 Basic membrane protein AMIR_RS31995 PF02575 YbaB/EbfC DNA-binding family AMIR_RS32010 PF15644 Papain fold toxin 1 AMIR_RS32015 PF15567 AMIR_RS32015 AMIR_RS32015 PF15644 Papain fold toxin 1 AMIR_RS32030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMIR_RS32035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMIR_RS32040 PF00890 FAD binding domain AMIR_RS32040 PF02910 Fumarate reductase flavoprotein C-term AMIR_RS32045 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIR_RS32045 PF13183 4Fe-4S dicluster domain AMIR_RS32050 PF00768 D-alanyl-D-alanine carboxypeptidase AMIR_RS32065 PF03631 AMIR_RS32065 AMIR_RS32070 PF00579 tRNA synthetases class I (W and Y) AMIR_RS32080 PF04055 Radical SAM superfamily AMIR_RS32085 PF01934 Protein of unknown function DUF86 AMIR_RS32090 PF01909 Nucleotidyltransferase domain AMIR_RS32095 PF03372 Endonuclease/Exonuclease/phosphatase family AMIR_RS32110 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIR_RS32115 PF04307 AMIR_RS32115 AMIR_RS32130 PF00226 DnaJ domain AMIR_RS32130 PF08378 AMIR_RS32130 AMIR_RS32135 PF00069 Protein kinase domain AMIR_RS32145 PF06182 AMIR_RS32145 AMIR_RS32150 PF06182 AMIR_RS32150 AMIR_RS32155 PF00005 ABC transporter AMIR_RS32165 PF08940 Domain of unknown function (DUF1918) AMIR_RS32170 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS32175 PF00459 Inositol monophosphatase family AMIR_RS32180 PF00056 lactate/malate dehydrogenase, NAD binding domain AMIR_RS32180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMIR_RS32185 PF00805 Pentapeptide repeats (8 copies) AMIR_RS32185 PF13599 Pentapeptide repeats (9 copies) AMIR_RS32195 PF14021 AMIR_RS32195 AMIR_RS32205 PF04657 AMIR_RS32205 AMIR_RS32210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMIR_RS32210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMIR_RS32215 PF11222 AMIR_RS32215 AMIR_RS32225 PF01808 AICARFT/IMPCHase bienzyme AMIR_RS32225 PF02142 MGS-like domain AMIR_RS32230 PF00551 Formyl transferase AMIR_RS32245 PF00549 CoA-ligase AMIR_RS32245 PF02629 CoA binding domain AMIR_RS32250 PF00549 CoA-ligase AMIR_RS32250 PF08442 ATP-grasp domain AMIR_RS32260 PF01551 Peptidase family M23 AMIR_RS32270 PF00580 UvrD/REP helicase N-terminal domain AMIR_RS32270 PF13361 UvrD-like helicase C-terminal domain AMIR_RS32275 PF01817 Chorismate mutase type II AMIR_RS32280 PF00850 Histone deacetylase domain AMIR_RS32305 PF00069 Protein kinase domain AMIR_RS32310 PF00069 Protein kinase domain AMIR_RS32315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS32315 PF03466 LysR substrate binding domain AMIR_RS32320 PF00892 EamA-like transporter family AMIR_RS32325 PF04686 Streptomyces sporulation and cell division protein, SsgA AMIR_RS32330 PF00072 Response regulator receiver domain AMIR_RS32330 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS32335 PF04024 AMIR_RS32335 AMIR_RS32340 PF04024 AMIR_RS32340 AMIR_RS32340 PF09922 Cell wall-active antibiotics response protein (DUF2154) AMIR_RS32350 PF00117 Glutamine amidotransferase class-I AMIR_RS32350 PF00958 GMP synthase C terminal domain AMIR_RS32350 PF02540 NAD synthase AMIR_RS32355 PF01636 Phosphotransferase enzyme family AMIR_RS32360 PF00171 Aldehyde dehydrogenase family AMIR_RS32365 PF00732 GMC oxidoreductase AMIR_RS32365 PF05199 GMC oxidoreductase AMIR_RS32375 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS32380 PF00478 IMP dehydrogenase / GMP reductase domain AMIR_RS32380 PF00571 CBS domain AMIR_RS32390 PF16751 AMIR_RS32390 AMIR_RS32395 PF04542 Sigma-70 region 2 AMIR_RS32395 PF08281 Sigma-70, region 4 AMIR_RS32400 PF00072 Response regulator receiver domain AMIR_RS32400 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS32410 PF13411 MerR HTH family regulatory protein AMIR_RS32415 PF02467 AMIR_RS32415 AMIR_RS32420 PF00118 TCP-1/cpn60 chaperonin family AMIR_RS32425 PF00166 Chaperonin 10 Kd subunit AMIR_RS32435 PF00814 Glycoprotease family AMIR_RS32440 PF00583 Acetyltransferase (GNAT) family AMIR_RS32445 PF00814 Glycoprotease family AMIR_RS32450 PF13411 MerR HTH family regulatory protein AMIR_RS32455 PF00085 Thioredoxin AMIR_RS32460 PF00501 AMP-binding enzyme AMIR_RS32460 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS32470 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMIR_RS32475 PF12697 Alpha/beta hydrolase family AMIR_RS32480 PF00842 Alanine racemase, C-terminal domain AMIR_RS32480 PF01168 Alanine racemase, N-terminal domain AMIR_RS32485 PF01256 Carbohydrate kinase AMIR_RS32485 PF03853 YjeF-related protein N-terminus AMIR_RS32490 PF01380 SIS domain AMIR_RS32490 PF13522 Glutamine amidotransferase domain AMIR_RS32495 PF12740 Chlorophyllase enzyme AMIR_RS32515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIR_RS32515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIR_RS32515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIR_RS32515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIR_RS32520 PF00380 Ribosomal protein S9/S16 AMIR_RS32525 PF00572 Ribosomal protein L13 AMIR_RS32530 PF06013 Proteins of 100 residues with WXG AMIR_RS32535 PF06013 Proteins of 100 residues with WXG AMIR_RS32545 PF00012 Hsp70 protein AMIR_RS32555 PF01580 FtsK/SpoIIIE family AMIR_RS32560 PF08817 WXG100 protein secretion system (Wss), protein YukD AMIR_RS32565 PF00082 Subtilase family AMIR_RS32580 PF05108 Protein of unknown function (DUF690) AMIR_RS32585 PF11203 AMIR_RS32585 AMIR_RS32595 PF00082 Subtilase family AMIR_RS32595 PF01483 Proprotein convertase P-domain AMIR_RS32595 PF05922 Peptidase inhibitor I9 AMIR_RS32600 PF01416 tRNA pseudouridine synthase AMIR_RS32605 PF01196 Ribosomal protein L17 AMIR_RS32610 PF01000 RNA polymerase Rpb3/RpoA insert domain AMIR_RS32610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMIR_RS32610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMIR_RS32615 PF00163 Ribosomal protein S4/S9 N-terminal domain AMIR_RS32615 PF01479 S4 domain AMIR_RS32620 PF00411 Ribosomal protein S11 AMIR_RS32625 PF00416 Ribosomal protein S13/S18 AMIR_RS32630 PF00444 Ribosomal protein L36 AMIR_RS32635 PF01176 Translation initiation factor 1A / IF-1 AMIR_RS32640 PF08044 AMIR_RS32640 AMIR_RS32645 PF08044 AMIR_RS32645 AMIR_RS32650 PF00557 Metallopeptidase family M24 AMIR_RS32655 PF00406 Adenylate kinase AMIR_RS32660 PF00344 SecY translocase AMIR_RS32665 PF00828 Ribosomal protein L18e/L15 AMIR_RS32670 PF00327 Ribosomal protein L30p/L7e AMIR_RS32675 PF00333 Ribosomal protein S5, N-terminal domain AMIR_RS32675 PF03719 Ribosomal protein S5, C-terminal domain AMIR_RS32680 PF00861 Ribosomal L18p/L5e family AMIR_RS32685 PF00347 Ribosomal protein L6 AMIR_RS32690 PF00410 Ribosomal protein S8 AMIR_RS32695 PF00253 Ribosomal protein S14p/S29e AMIR_RS32700 PF00281 Ribosomal protein L5 AMIR_RS32700 PF00673 ribosomal L5P family C-terminus AMIR_RS32705 PF00467 KOW motif AMIR_RS32705 PF17136 AMIR_RS32705 AMIR_RS32710 PF00238 Ribosomal protein L14p/L23e AMIR_RS32715 PF00366 Ribosomal protein S17 AMIR_RS32720 PF00831 Ribosomal L29 protein AMIR_RS32725 PF00252 Ribosomal protein L16p/L10e AMIR_RS32730 PF00189 Ribosomal protein S3, C-terminal domain AMIR_RS32730 PF07650 KH domain AMIR_RS32735 PF00237 Ribosomal protein L22p/L17e AMIR_RS32740 PF00203 Ribosomal protein S19 AMIR_RS32745 PF00181 Ribosomal Proteins L2, RNA binding domain AMIR_RS32745 PF03947 Ribosomal Proteins L2, C-terminal domain AMIR_RS32750 PF00276 Ribosomal protein L23 AMIR_RS32755 PF00573 Ribosomal protein L4/L1 family AMIR_RS32760 PF00297 Ribosomal protein L3 AMIR_RS32765 PF00338 Ribosomal protein S10p/S20e AMIR_RS32770 PF00009 Elongation factor Tu GTP binding domain AMIR_RS32770 PF03143 Elongation factor Tu C-terminal domain AMIR_RS32770 PF03144 Elongation factor Tu domain 2 AMIR_RS32775 PF00009 Elongation factor Tu GTP binding domain AMIR_RS32775 PF00679 Elongation factor G C-terminus AMIR_RS32775 PF03144 Elongation factor Tu domain 2 AMIR_RS32775 PF03764 Elongation factor G, domain IV AMIR_RS32775 PF14492 Elongation Factor G, domain II AMIR_RS32780 PF00177 Ribosomal protein S7p/S5e AMIR_RS32785 PF00164 Ribosomal protein S12/S23 AMIR_RS32805 PF01636 Phosphotransferase enzyme family AMIR_RS32810 PF13453 AMIR_RS32810 AMIR_RS32815 PF00623 RNA polymerase Rpb1, domain 2 AMIR_RS32815 PF04983 RNA polymerase Rpb1, domain 3 AMIR_RS32815 PF04997 RNA polymerase Rpb1, domain 1 AMIR_RS32815 PF04998 RNA polymerase Rpb1, domain 5 AMIR_RS32815 PF05000 RNA polymerase Rpb1, domain 4 AMIR_RS32820 PF00562 RNA polymerase Rpb2, domain 6 AMIR_RS32820 PF04560 RNA polymerase Rpb2, domain 7 AMIR_RS32820 PF04561 RNA polymerase Rpb2, domain 2 AMIR_RS32820 PF04563 RNA polymerase beta subunit AMIR_RS32820 PF04565 RNA polymerase Rpb2, domain 3 AMIR_RS32820 PF10385 RNA polymerase beta subunit external 1 domain AMIR_RS32845 PF02470 AMIR_RS32845 AMIR_RS32850 PF02405 AMIR_RS32850 AMIR_RS32855 PF02405 AMIR_RS32855 AMIR_RS32860 PF00005 ABC transporter AMIR_RS32865 PF00542 Ribosomal protein L7/L12 C-terminal domain AMIR_RS32865 PF16320 AMIR_RS32865 AMIR_RS32870 PF00466 Ribosomal protein L10 AMIR_RS32880 PF00687 Ribosomal protein L1p/L10e family AMIR_RS32885 PF00298 Ribosomal protein L11, RNA binding domain AMIR_RS32885 PF03946 Ribosomal protein L11, N-terminal domain AMIR_RS32890 PF02357 Transcription termination factor nusG AMIR_RS32895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMIR_RS32905 PF00155 Aminotransferase class I and II AMIR_RS32910 PF05423 Mycobacterium membrane protein AMIR_RS32920 PF01575 MaoC like domain AMIR_RS32925 PF13452 N-terminal half of MaoC dehydratase AMIR_RS32940 PF00563 EAL domain AMIR_RS32940 PF00990 GGDEF domain AMIR_RS32940 PF01590 GAF domain AMIR_RS32955 PF13391 AMIR_RS32955 AMIR_RS32965 PF04461 Protein of unknown function (DUF520) AMIR_RS32970 PF00483 Nucleotidyl transferase AMIR_RS32975 PF01435 Peptidase family M48 AMIR_RS32980 PF00037 4Fe-4S binding domain AMIR_RS32985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIR_RS32990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIR_RS32995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS33000 PF02274 Amidinotransferase AMIR_RS33005 PF01037 AsnC family AMIR_RS33005 PF13404 AsnC-type helix-turn-helix domain AMIR_RS33010 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS33015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMIR_RS33015 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMIR_RS33015 PF17147 AMIR_RS33015 AMIR_RS33020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33030 PF00892 EamA-like transporter family AMIR_RS33035 PF00348 Polyprenyl synthetase AMIR_RS33040 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMIR_RS33045 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMIR_RS33050 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMIR_RS33050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMIR_RS33055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMIR_RS33060 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMIR_RS33065 PF12838 4Fe-4S dicluster domain AMIR_RS33070 PF00146 NADH dehydrogenase AMIR_RS33075 PF00384 Molybdopterin oxidoreductase AMIR_RS33075 PF01568 Molydopterin dinucleotide binding domain AMIR_RS33075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMIR_RS33075 PF13510 2Fe-2S iron-sulfur cluster binding domain AMIR_RS33080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIR_RS33080 PF10531 SLBB domain AMIR_RS33080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIR_RS33085 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMIR_RS33090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIR_RS33095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIR_RS33100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIR_RS33105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMIR_RS33110 PF01494 FAD binding domain AMIR_RS33115 PF01209 ubiE/COQ5 methyltransferase family AMIR_RS33120 PF00459 Inositol monophosphatase family AMIR_RS33130 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIR_RS33130 PF00175 Oxidoreductase NAD-binding domain AMIR_RS33135 PF01883 Domain of unknown function DUF59 AMIR_RS33140 PF05138 Phenylacetic acid catabolic protein AMIR_RS33145 PF06243 Phenylacetic acid degradation B AMIR_RS33150 PF05138 Phenylacetic acid catabolic protein AMIR_RS33160 PF00425 chorismate binding enzyme AMIR_RS33165 PF03747 ADP-ribosylglycohydrolase AMIR_RS33170 PF00291 Pyridoxal-phosphate dependent enzyme AMIR_RS33180 PF01040 UbiA prenyltransferase family AMIR_RS33190 PF00501 AMP-binding enzyme AMIR_RS33190 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33195 PF00378 Enoyl-CoA hydratase/isomerase family AMIR_RS33200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS33205 PF01433 Peptidase family M1 AMIR_RS33215 PF13560 Helix-turn-helix domain AMIR_RS33220 PF04149 AMIR_RS33220 AMIR_RS33225 PF14012 AMIR_RS33225 AMIR_RS33230 PF01037 AsnC family AMIR_RS33230 PF13404 AsnC-type helix-turn-helix domain AMIR_RS33235 PF12728 Helix-turn-helix domain AMIR_RS33245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIR_RS33250 PF01578 AMIR_RS33250 AMIR_RS33255 PF05140 AMIR_RS33255 AMIR_RS33260 PF02683 AMIR_RS33260 AMIR_RS33265 PF09471 IgA Peptidase M64 AMIR_RS33270 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS33270 PF13602 Zinc-binding dehydrogenase AMIR_RS33275 PF00578 AhpC/TSA family AMIR_RS33280 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS33285 PF00202 Aminotransferase class-III AMIR_RS33295 PF11292 AMIR_RS33295 AMIR_RS33325 PF00490 Delta-aminolevulinic acid dehydratase AMIR_RS33330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIR_RS33330 PF02602 Uroporphyrinogen-III synthase HemD AMIR_RS33335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMIR_RS33335 PF03900 Porphobilinogen deaminase, C-terminal domain AMIR_RS33340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMIR_RS33340 PF01488 Shikimate / quinate 5-dehydrogenase AMIR_RS33340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMIR_RS33345 PF02629 CoA binding domain AMIR_RS33345 PF06971 Putative DNA-binding protein N-terminus AMIR_RS33350 PF02469 Fasciclin domain AMIR_RS33355 PF00174 Oxidoreductase molybdopterin binding domain AMIR_RS33360 PF05768 Glutaredoxin-like domain (DUF836) AMIR_RS33365 PF00501 AMP-binding enzyme AMIR_RS33365 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33370 PF04542 Sigma-70 region 2 AMIR_RS33370 PF08281 Sigma-70, region 4 AMIR_RS33380 PF12710 haloacid dehalogenase-like hydrolase AMIR_RS33385 PF01553 Acyltransferase AMIR_RS33395 PF01370 NAD dependent epimerase/dehydratase family AMIR_RS33400 PF12728 Helix-turn-helix domain AMIR_RS33405 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIR_RS33405 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMIR_RS33410 PF13622 Thioesterase-like superfamily AMIR_RS33420 PF01261 Xylose isomerase-like TIM barrel AMIR_RS33430 PF02541 Ppx/GppA phosphatase family AMIR_RS33435 PF00072 Response regulator receiver domain AMIR_RS33435 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS33440 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS33440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS33445 PF00248 Aldo/keto reductase family AMIR_RS33455 PF00300 Histidine phosphatase superfamily (branch 1) AMIR_RS33460 PF00501 AMP-binding enzyme AMIR_RS33460 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS33465 PF14257 AMIR_RS33465 AMIR_RS33470 PF10722 Putative bacterial sensory transduction regulator AMIR_RS33475 PF00534 Glycosyl transferases group 1 AMIR_RS33475 PF13439 Glycosyltransferase Family 4 AMIR_RS33480 PF03734 L,D-transpeptidase catalytic domain AMIR_RS33485 PF00106 short chain dehydrogenase AMIR_RS33495 PF01565 FAD binding domain AMIR_RS33495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMIR_RS33500 PF10698 AMIR_RS33500 AMIR_RS33510 PF07398 AMIR_RS33510 AMIR_RS33510 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS33515 PF00551 Formyl transferase AMIR_RS33525 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS33525 PF13977 Bacterial transcriptional repressor AMIR_RS33530 PF04073 Aminoacyl-tRNA editing domain AMIR_RS33535 PF07739 TipAS antibiotic-recognition domain AMIR_RS33535 PF13411 MerR HTH family regulatory protein AMIR_RS33540 PF01965 DJ-1/PfpI family AMIR_RS33550 PF10724 AMIR_RS33550 AMIR_RS33560 PF01381 Helix-turn-helix AMIR_RS33565 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMIR_RS33570 PF04286 AMIR_RS33570 AMIR_RS33575 PF00155 Aminotransferase class I and II AMIR_RS33590 PF07336 Protein of unknown function (DUF1470) AMIR_RS33590 PF11706 CGNR zinc finger AMIR_RS33595 PF03551 Transcriptional regulator PadR-like family AMIR_RS33600 PF00005 ABC transporter AMIR_RS33605 PF02687 AMIR_RS33605 AMIR_RS33610 PF02687 AMIR_RS33610 AMIR_RS33615 PF02687 AMIR_RS33615 AMIR_RS33630 PF00155 Aminotransferase class I and II AMIR_RS33630 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS33640 PF02861 Clp amino terminal domain AMIR_RS33645 PF08279 HTH domain AMIR_RS33680 PF00403 Heavy-metal-associated domain AMIR_RS33685 PF00122 E1-E2 ATPase AMIR_RS33685 PF00403 Heavy-metal-associated domain AMIR_RS33685 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS33695 PF00313 'Cold-shock' DNA-binding domain AMIR_RS33700 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS33705 PF09995 AMIR_RS33705 AMIR_RS33715 PF07728 AAA domain (dynein-related subfamily) AMIR_RS33715 PF12458 AMIR_RS33715 AMIR_RS33735 PF00107 Zinc-binding dehydrogenase AMIR_RS33735 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS33740 PF14231 GXWXG protein AMIR_RS33740 PF14232 Domain of unknown function (DUF4334) AMIR_RS33755 PF01207 Dihydrouridine synthase (Dus) AMIR_RS33765 PF00990 GGDEF domain AMIR_RS33780 PF01895 PhoU domain AMIR_RS33785 PF14011 EspG family AMIR_RS33795 PF00005 ABC transporter AMIR_RS33800 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS33805 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS33810 PF12849 PBP superfamily domain AMIR_RS33815 PF00583 Acetyltransferase (GNAT) family AMIR_RS33820 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS33825 PF12146 Putative lysophospholipase AMIR_RS33830 PF11209 AMIR_RS33830 AMIR_RS33835 PF00085 Thioredoxin AMIR_RS33840 PF14340 AMIR_RS33840 AMIR_RS33845 PF00581 Rhodanese-like domain AMIR_RS33850 PF07210 AMIR_RS33850 AMIR_RS33855 PF08768 Domain of unknown function (DUF1794) AMIR_RS33860 PF02682 Allophanate hydrolase subunit 1 AMIR_RS33865 PF02626 Allophanate hydrolase subunit 2 AMIR_RS33870 PF01063 Aminotransferase class IV AMIR_RS33875 PF01475 Ferric uptake regulator family AMIR_RS33880 PF01571 Aminomethyltransferase folate-binding domain AMIR_RS33880 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIR_RS33885 PF05853 Prokaryotic protein of unknown function (DUF849) AMIR_RS33895 PF07690 Major Facilitator Superfamily AMIR_RS33905 PF11273 AMIR_RS33905 AMIR_RS33910 PF00027 Cyclic nucleotide-binding domain AMIR_RS33910 PF13545 Crp-like helix-turn-helix domain AMIR_RS33920 PF00205 Thiamine pyrophosphate enzyme, central domain AMIR_RS33920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIR_RS33920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIR_RS33925 PF04962 KduI/IolB family AMIR_RS33930 PF00294 pfkB family carbohydrate kinase AMIR_RS33935 PF00005 ABC transporter AMIR_RS33940 PF02653 AMIR_RS33940 AMIR_RS33945 PF13407 Periplasmic binding protein domain AMIR_RS33950 PF01261 Xylose isomerase-like TIM barrel AMIR_RS33955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIR_RS33955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIR_RS33960 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS33960 PF13377 Periplasmic binding protein-like domain AMIR_RS33965 PF00472 RF-1 domain AMIR_RS33980 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS33980 PF02769 AIR synthase related protein, C-terminal domain AMIR_RS33985 PF13522 Glutamine amidotransferase domain AMIR_RS33990 PF07398 AMIR_RS33990 AMIR_RS33990 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain AMIR_RS33995 PF10824 Protein of unknown function (DUF2580) AMIR_RS34000 PF06259 Alpha/beta hydrolase AMIR_RS34020 PF14011 EspG family AMIR_RS34040 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS34040 PF16912 AMIR_RS34040 AMIR_RS34045 PF00563 EAL domain AMIR_RS34045 PF00990 GGDEF domain AMIR_RS34045 PF13426 PAS domain AMIR_RS34050 PF13576 Pentapeptide repeats (9 copies) AMIR_RS34060 PF13576 Pentapeptide repeats (9 copies) AMIR_RS34065 PF01183 Glycosyl hydrolases family 25 AMIR_RS34070 PF01183 Glycosyl hydrolases family 25 AMIR_RS34075 PF00586 AIR synthase related protein, N-terminal domain AMIR_RS34075 PF02769 AIR synthase related protein, C-terminal domain AMIR_RS34080 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMIR_RS34085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMIR_RS34100 PF13483 Beta-lactamase superfamily domain AMIR_RS34105 PF10096 AMIR_RS34105 AMIR_RS34110 PF01259 SAICAR synthetase AMIR_RS34115 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS34120 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS34125 PF00005 ABC transporter AMIR_RS34135 PF00206 Lyase AMIR_RS34135 PF10397 Adenylosuccinate lyase C-terminus AMIR_RS34145 PF04542 Sigma-70 region 2 AMIR_RS34145 PF08281 Sigma-70, region 4 AMIR_RS34150 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS34160 PF04542 Sigma-70 region 2 AMIR_RS34160 PF08281 Sigma-70, region 4 AMIR_RS34165 PF01212 Beta-eliminating lyase AMIR_RS34170 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS34180 PF00155 Aminotransferase class I and II AMIR_RS34185 PF14011 EspG family AMIR_RS34190 PF14011 EspG family AMIR_RS34200 PF12079 AMIR_RS34200 AMIR_RS34210 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMIR_RS34210 PF02843 Phosphoribosylglycinamide synthetase, C domain AMIR_RS34210 PF02844 Phosphoribosylglycinamide synthetase, N domain AMIR_RS34215 PF16868 AMIR_RS34215 AMIR_RS34220 PF06808 AMIR_RS34220 AMIR_RS34225 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIR_RS34230 PF00296 Luciferase-like monooxygenase AMIR_RS34235 PF00709 Adenylosuccinate synthetase AMIR_RS34245 PF07510 AMIR_RS34245 AMIR_RS34255 PF00722 Glycosyl hydrolases family 16 AMIR_RS34260 PF13515 AMIR_RS34260 AMIR_RS34265 PF11349 AMIR_RS34265 AMIR_RS34270 PF01116 Fructose-bisphosphate aldolase class-II AMIR_RS34275 PF04248 Domain of unknown function (DUF427) AMIR_RS34280 PF00248 Aldo/keto reductase family AMIR_RS34285 PF00106 short chain dehydrogenase AMIR_RS34290 PF03795 YCII-related domain AMIR_RS34295 PF04542 Sigma-70 region 2 AMIR_RS34295 PF08281 Sigma-70, region 4 AMIR_RS34300 PF00480 ROK family AMIR_RS34305 PF01979 Amidohydrolase family AMIR_RS34315 PF09335 AMIR_RS34315 AMIR_RS34320 PF01565 FAD binding domain AMIR_RS34320 PF02913 FAD linked oxidases, C-terminal domain AMIR_RS34325 PF09335 AMIR_RS34325 AMIR_RS34330 PF00485 Phosphoribulokinase / Uridine kinase family AMIR_RS34335 PF00294 pfkB family carbohydrate kinase AMIR_RS34340 PF00356 Bacterial regulatory proteins, lacI family AMIR_RS34340 PF13377 Periplasmic binding protein-like domain AMIR_RS34345 PF03663 Glycosyl hydrolase family 76 AMIR_RS34350 PF00588 SpoU rRNA Methylase family AMIR_RS34355 PF10861 AMIR_RS34355 AMIR_RS34365 PF00156 Phosphoribosyl transferase domain AMIR_RS34390 PF00106 short chain dehydrogenase AMIR_RS34400 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS34400 PF02861 Clp amino terminal domain AMIR_RS34400 PF07724 AAA domain (Cdc48 subfamily) AMIR_RS34400 PF10431 C-terminal, D2-small domain, of ClpB protein AMIR_RS34410 PF00042 Globin AMIR_RS34410 PF00175 Oxidoreductase NAD-binding domain AMIR_RS34410 PF00970 Oxidoreductase FAD-binding domain AMIR_RS34415 PF13411 MerR HTH family regulatory protein AMIR_RS34420 PF00226 DnaJ domain AMIR_RS34420 PF00684 DnaJ central domain AMIR_RS34420 PF01556 DnaJ C terminal domain AMIR_RS34425 PF01025 GrpE AMIR_RS34430 PF00012 Hsp70 protein AMIR_RS34435 PF13349 AMIR_RS34435 AMIR_RS34445 PF00893 Small Multidrug Resistance protein AMIR_RS34450 PF02754 AMIR_RS34450 AMIR_RS34450 PF13183 4Fe-4S dicluster domain AMIR_RS34455 PF04020 AMIR_RS34455 AMIR_RS34465 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS34480 PF00692 dUTPase AMIR_RS34495 PF00474 Sodium:solute symporter family AMIR_RS34500 PF00072 Response regulator receiver domain AMIR_RS34500 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS34505 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS34505 PF12418 AMIR_RS34505 AMIR_RS34505 PF12806 AMIR_RS34505 AMIR_RS34510 PF06724 AMIR_RS34510 AMIR_RS34515 PF04294 AMIR_RS34515 AMIR_RS34515 PF12229 Putative peptidoglycan binding domain AMIR_RS34520 PF00166 Chaperonin 10 Kd subunit AMIR_RS34525 PF00578 AhpC/TSA family AMIR_RS34535 PF04402 Protein of unknown function (DUF541) AMIR_RS34540 PF00691 OmpA family AMIR_RS34545 PF00108 Thiolase, N-terminal domain AMIR_RS34545 PF02803 Thiolase, C-terminal domain AMIR_RS34550 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS34555 PF01575 MaoC like domain AMIR_RS34560 PF14487 AMIR_RS34560 AMIR_RS34570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIR_RS34570 PF02770 Acyl-CoA dehydrogenase, middle domain AMIR_RS34570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIR_RS34575 PF02036 SCP-2 sterol transfer family AMIR_RS34580 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS34585 PF13411 MerR HTH family regulatory protein AMIR_RS34590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIR_RS34590 PF00364 Biotin-requiring enzyme AMIR_RS34590 PF02817 e3 binding domain AMIR_RS34595 PF02779 Transketolase, pyrimidine binding domain AMIR_RS34595 PF02780 Transketolase, C-terminal domain AMIR_RS34600 PF00676 Dehydrogenase E1 component AMIR_RS34605 PF01546 Peptidase family M20/M25/M40 AMIR_RS34605 PF07687 Peptidase dimerisation domain AMIR_RS34615 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIR_RS34620 PF00528 Binding-protein-dependent transport system inner membrane component AMIR_RS34625 PF00005 ABC transporter AMIR_RS34655 PF00821 Phosphoenolpyruvate carboxykinase AMIR_RS34660 PF13845 AMIR_RS34660 AMIR_RS34670 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS34670 PF07729 FCD domain AMIR_RS34675 PF11755 AMIR_RS34675 AMIR_RS34685 PF00480 ROK family AMIR_RS34695 PF13560 Helix-turn-helix domain AMIR_RS34700 PF04149 AMIR_RS34700 AMIR_RS34705 PF00350 Dynamin family AMIR_RS34710 PF01025 GrpE AMIR_RS34715 PF00350 Dynamin family AMIR_RS34725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS34725 PF07730 Histidine kinase AMIR_RS34730 PF00072 Response regulator receiver domain AMIR_RS34730 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34735 PF00106 short chain dehydrogenase AMIR_RS34740 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS34740 PF13977 Bacterial transcriptional repressor AMIR_RS34745 PF08282 haloacid dehalogenase-like hydrolase AMIR_RS34750 PF00011 Hsp20/alpha crystallin family AMIR_RS34755 PF00011 Hsp20/alpha crystallin family AMIR_RS34760 PF07730 Histidine kinase AMIR_RS34765 PF02390 Putative methyltransferase AMIR_RS34775 PF00082 Subtilase family AMIR_RS34785 PF00005 ABC transporter AMIR_RS34790 PF01243 Pyridoxamine 5'-phosphate oxidase AMIR_RS34800 PF01979 Amidohydrolase family AMIR_RS34805 PF00106 short chain dehydrogenase AMIR_RS34810 PF05787 Bacterial protein of unknown function (DUF839) AMIR_RS34815 PF05787 Bacterial protein of unknown function (DUF839) AMIR_RS34820 PF07690 Major Facilitator Superfamily AMIR_RS34825 PF13419 Haloacid dehalogenase-like hydrolase AMIR_RS34830 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS34835 PF01658 Myo-inositol-1-phosphate synthase AMIR_RS34840 PF03551 Transcriptional regulator PadR-like family AMIR_RS34850 PF00905 Penicillin binding protein transpeptidase domain AMIR_RS34850 PF00912 Transglycosylase AMIR_RS34855 PF09594 AMIR_RS34855 AMIR_RS34860 PF05007 AMIR_RS34860 AMIR_RS34865 PF01261 Xylose isomerase-like TIM barrel AMIR_RS34875 PF01250 Ribosomal protein S6 AMIR_RS34880 PF00436 Single-strand binding protein family AMIR_RS34885 PF01084 Ribosomal protein S18 AMIR_RS34890 PF01281 Ribosomal protein L9, N-terminal domain AMIR_RS34890 PF03948 Ribosomal protein L9, C-terminal domain AMIR_RS34895 PF00772 DnaB-like helicase N terminal domain AMIR_RS34895 PF03796 DnaB-like helicase C terminal domain AMIR_RS34905 PF01740 STAS domain AMIR_RS34910 PF13561 Enoyl-(Acyl carrier protein) reductase AMIR_RS34915 PF13560 Helix-turn-helix domain AMIR_RS34925 PF00990 GGDEF domain AMIR_RS34945 PF01594 AMIR_RS34945 AMIR_RS34950 PF00990 GGDEF domain AMIR_RS34955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS34960 PF00072 Response regulator receiver domain AMIR_RS34960 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS34975 PF14428 AMIR_RS34975 AMIR_RS34980 PF14430 AMIR_RS34980 AMIR_RS34985 PF08044 AMIR_RS34985 AMIR_RS34990 PF11066 AMIR_RS34990 AMIR_RS34990 PF13460 NADH(P)-binding AMIR_RS34995 PF00107 Zinc-binding dehydrogenase AMIR_RS34995 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS35000 PF00155 Aminotransferase class I and II AMIR_RS35005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS35005 PF03466 LysR substrate binding domain AMIR_RS35020 PF14136 AMIR_RS35020 AMIR_RS35025 PF00391 PEP-utilising enzyme, mobile domain AMIR_RS35025 PF02896 PEP-utilising enzyme, TIM barrel domain AMIR_RS35025 PF05524 PEP-utilising enzyme, N-terminal AMIR_RS35030 PF00294 pfkB family carbohydrate kinase AMIR_RS35035 PF10101 AMIR_RS35035 AMIR_RS35040 PF03176 MMPL family AMIR_RS35045 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35050 PF08264 Anticodon-binding domain of tRNA AMIR_RS35050 PF09334 tRNA synthetases class I (M) AMIR_RS35050 PF13603 Leucyl-tRNA synthetase, Domain 2 AMIR_RS35055 PF13630 AMIR_RS35055 AMIR_RS35060 PF02622 Uncharacterized ACR, COG1678 AMIR_RS35065 PF07690 Major Facilitator Superfamily AMIR_RS35070 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35075 PF01743 Poly A polymerase head domain AMIR_RS35075 PF01966 HD domain AMIR_RS35075 PF12627 Probable RNA and SrmB- binding site of polymerase A AMIR_RS35080 PF00293 NUDIX domain AMIR_RS35090 PF03023 AMIR_RS35090 AMIR_RS35100 PF04542 Sigma-70 region 2 AMIR_RS35100 PF08281 Sigma-70, region 4 AMIR_RS35110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIR_RS35115 PF00085 Thioredoxin AMIR_RS35120 PF01471 Putative peptidoglycan binding domain AMIR_RS35120 PF01520 N-acetylmuramoyl-L-alanine amidase AMIR_RS35125 PF00583 Acetyltransferase (GNAT) family AMIR_RS35130 PF00155 Aminotransferase class I and II AMIR_RS35135 PF01820 D-ala D-ala ligase N-terminus AMIR_RS35135 PF07478 D-ala D-ala ligase C-terminus AMIR_RS35140 PF02195 ParB-like nuclease domain AMIR_RS35145 PF13614 AAA domain AMIR_RS35150 PF02527 rRNA small subunit methyltransferase G AMIR_RS35155 PF00293 NUDIX domain AMIR_RS35160 PF01424 R3H domain AMIR_RS35165 PF02096 60Kd inner membrane protein AMIR_RS35170 PF01809 AMIR_RS35170 AMIR_RS35175 PF00825 Ribonuclease P AMIR_RS35180 PF00468 Ribosomal protein L34 AMIR_RS35205 PF08241 Methyltransferase domain AMIR_RS35230 PF00565 Staphylococcal nuclease homologue AMIR_RS35245 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35255 PF13406 Transglycosylase SLT domain AMIR_RS35270 PF13406 Transglycosylase SLT domain AMIR_RS35275 PF06271 AMIR_RS35275 AMIR_RS35280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIR_RS35280 PF03466 LysR substrate binding domain AMIR_RS35285 PF16170 AMIR_RS35285 AMIR_RS35290 PF12697 Alpha/beta hydrolase family AMIR_RS35295 PF05050 Methyltransferase FkbM domain AMIR_RS35310 PF13176 Tetratricopeptide repeat AMIR_RS35310 PF13424 Tetratricopeptide repeat AMIR_RS35315 PF13560 Helix-turn-helix domain AMIR_RS35325 PF00392 Bacterial regulatory proteins, gntR family AMIR_RS35340 PF13560 Helix-turn-helix domain AMIR_RS35345 PF13531 Bacterial extracellular solute-binding protein AMIR_RS35350 PF13354 Beta-lactamase enzyme family AMIR_RS35385 PF00082 Subtilase family AMIR_RS35395 PF01569 PAP2 superfamily AMIR_RS35400 PF14594 AMIR_RS35400 AMIR_RS35420 PF05331 AMIR_RS35420 AMIR_RS35425 PF02566 OsmC-like protein AMIR_RS35430 PF14428 AMIR_RS35430 AMIR_RS35445 PF13560 Helix-turn-helix domain AMIR_RS35455 PF14428 AMIR_RS35455 AMIR_RS35465 PF03061 Thioesterase superfamily AMIR_RS35500 PF10400 Virulence activator alpha C-term AMIR_RS35510 PF12870 Lumazine-binding domain AMIR_RS35515 PF07721 Tetratricopeptide repeat AMIR_RS35515 PF13432 Tetratricopeptide repeat AMIR_RS35525 PF00563 EAL domain AMIR_RS35525 PF00990 GGDEF domain AMIR_RS35525 PF08447 PAS fold AMIR_RS35530 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35535 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS35535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS35535 PF08447 PAS fold AMIR_RS35540 PF04347 AMIR_RS35540 AMIR_RS35545 PF00512 His Kinase A (phospho-acceptor) domain AMIR_RS35545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIR_RS35545 PF08448 PAS fold AMIR_RS35545 PF13426 PAS domain AMIR_RS35550 PF07452 AMIR_RS35550 AMIR_RS35555 PF12802 MarR family AMIR_RS35570 PF07690 Major Facilitator Superfamily AMIR_RS35590 PF00563 EAL domain AMIR_RS35590 PF00990 GGDEF domain AMIR_RS35595 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS35595 PF13620 Carboxypeptidase regulatory-like domain AMIR_RS35605 PF08281 Sigma-70, region 4 AMIR_RS35610 PF04542 Sigma-70 region 2 AMIR_RS35620 PF04213 AMIR_RS35620 AMIR_RS35625 PF00891 O-methyltransferase AMIR_RS35625 PF16864 AMIR_RS35625 AMIR_RS35635 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS35635 PF00550 Phosphopantetheine attachment site AMIR_RS35635 PF00698 Acyl transferase domain AMIR_RS35635 PF00975 Thioesterase domain AMIR_RS35635 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS35635 PF08659 KR domain AMIR_RS35635 PF08990 Erythronolide synthase docking AMIR_RS35635 PF14765 Polyketide synthase dehydratase AMIR_RS35635 PF16197 AMIR_RS35635 AMIR_RS35645 PF07691 PA14 domain AMIR_RS35645 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS35665 PF01569 PAP2 superfamily AMIR_RS35670 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35675 PF05593 AMIR_RS35675 AMIR_RS35685 PF13411 MerR HTH family regulatory protein AMIR_RS35690 PF00975 Thioesterase domain AMIR_RS35695 PF00975 Thioesterase domain AMIR_RS35700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIR_RS35700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIR_RS35725 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS35725 PF03704 Bacterial transcriptional activator domain AMIR_RS35725 PF13191 AAA ATPase domain AMIR_RS35740 PF00929 Exonuclease AMIR_RS35745 PF00720 Subtilisin inhibitor-like AMIR_RS35755 PF13676 TIR domain AMIR_RS35760 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35765 PF13365 Trypsin-like peptidase domain AMIR_RS35770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIR_RS35775 PF02517 CAAX protease self-immunity AMIR_RS35780 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35780 PF13191 AAA ATPase domain AMIR_RS35785 PF01183 Glycosyl hydrolases family 25 AMIR_RS35785 PF01476 LysM domain AMIR_RS35810 PF13354 Beta-lactamase enzyme family AMIR_RS35815 PF12833 Helix-turn-helix domain AMIR_RS35820 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35850 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS35850 PF13191 AAA ATPase domain AMIR_RS35855 PF01183 Glycosyl hydrolases family 25 AMIR_RS35860 PF12697 Alpha/beta hydrolase family AMIR_RS35865 PF00535 Glycosyl transferase family 2 AMIR_RS35865 PF13632 Glycosyl transferase family group 2 AMIR_RS35870 PF00005 ABC transporter AMIR_RS35870 PF00664 ABC transporter transmembrane region AMIR_RS35875 PF00720 Subtilisin inhibitor-like AMIR_RS35880 PF13581 Histidine kinase-like ATPase domain AMIR_RS35885 PF06197 AMIR_RS35885 AMIR_RS35890 PF13692 Glycosyl transferases group 1 AMIR_RS35895 PF13302 Acetyltransferase (GNAT) domain AMIR_RS35900 PF00501 AMP-binding enzyme AMIR_RS35900 PF00550 Phosphopantetheine attachment site AMIR_RS35900 PF00668 Condensation domain AMIR_RS35900 PF13193 AMP-binding enzyme C-terminal domain AMIR_RS35900 PF13745 HxxPF-repeated domain AMIR_RS35935 PF03752 AMIR_RS35935 AMIR_RS35935 PF07591 Pretoxin HINT domain AMIR_RS35940 PF00089 Trypsin AMIR_RS35955 PF01381 Helix-turn-helix AMIR_RS35960 PF00106 short chain dehydrogenase AMIR_RS35965 PF13676 TIR domain AMIR_RS35970 PF00106 short chain dehydrogenase AMIR_RS35985 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS35990 PF02575 YbaB/EbfC DNA-binding family AMIR_RS36000 PF13569 AMIR_RS36000 AMIR_RS36005 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS36010 PF10604 Polyketide cyclase / dehydrase and lipid transport AMIR_RS36015 PF13699 AMIR_RS36015 AMIR_RS36025 PF00717 Peptidase S24-like AMIR_RS36025 PF13385 Concanavalin A-like lectin/glucanases superfamily AMIR_RS36030 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS36035 PF00823 PPE family AMIR_RS36040 PF05593 AMIR_RS36040 AMIR_RS36060 PF14022 AMIR_RS36060 AMIR_RS36065 PF12146 Putative lysophospholipase AMIR_RS36070 PF03995 Peptidase inhibitor family I36 AMIR_RS36075 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS36075 PF16859 AMIR_RS36075 AMIR_RS36080 PF13649 Methyltransferase domain AMIR_RS36095 PF00534 Glycosyl transferases group 1 AMIR_RS36095 PF13439 Glycosyltransferase Family 4 AMIR_RS36100 PF00069 Protein kinase domain AMIR_RS36100 PF14016 AMIR_RS36100 AMIR_RS36120 PF00486 Transcriptional regulatory protein, C terminal AMIR_RS36120 PF03704 Bacterial transcriptional activator domain AMIR_RS36120 PF13191 AAA ATPase domain AMIR_RS36130 PF00583 Acetyltransferase (GNAT) family AMIR_RS36140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIR_RS36145 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS36150 PF00652 Ricin-type beta-trefoil lectin domain AMIR_RS36155 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS36155 PF00550 Phosphopantetheine attachment site AMIR_RS36155 PF00698 Acyl transferase domain AMIR_RS36155 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS36155 PF08659 KR domain AMIR_RS36155 PF14765 Polyketide synthase dehydratase AMIR_RS36155 PF16197 AMIR_RS36155 AMIR_RS36170 PF13276 AMIR_RS36170 AMIR_RS36175 PF00004 ATPase family associated with various cellular activities (AAA) AMIR_RS36180 PF00069 Protein kinase domain AMIR_RS36185 PF00196 Bacterial regulatory proteins, luxR family AMIR_RS36190 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIR_RS36190 PF00550 Phosphopantetheine attachment site AMIR_RS36190 PF00698 Acyl transferase domain AMIR_RS36190 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIR_RS36190 PF08659 KR domain AMIR_RS36190 PF16197 AMIR_RS36190 AMIR_RS36195 PF01510 N-acetylmuramoyl-L-alanine amidase AMIR_RS36200 PF00005 ABC transporter AMIR_RS36200 PF00664 ABC transporter transmembrane region AMIR_RS36210 PF03861 ANTAR domain AMIR_RS36215 PF00534 Glycosyl transferases group 1 AMIR_RS36215 PF13579 Glycosyl transferase 4-like domain AMIR_RS36220 PF02575 YbaB/EbfC DNA-binding family AMIR_RS36230 PF05331 AMIR_RS36230 AMIR_RS36260 PF08240 Alcohol dehydrogenase GroES-like domain AMIR_RS36265 PF14325 AMIR_RS36265 AMIR_RS36285 PF13560 Helix-turn-helix domain AMIR_RS36295 PF13391 AMIR_RS36295 AMIR_RS36330 PF05709 Phage tail protein AMIR_RS36340 PF01183 Glycosyl hydrolases family 25 AMIR_RS36345 PF09534 AMIR_RS36345 AMIR_RS36350 PF10821 AMIR_RS36350 AMIR_RS36355 PF13508 Acetyltransferase (GNAT) domain AMIR_RS36375 PF00188 Cysteine-rich secretory protein family AMIR_RS36390 PF07681 AMIR_RS36390 AMIR_RS36405 PF00720 Subtilisin inhibitor-like AMIR_RS36415 PF01636 Phosphotransferase enzyme family AMIR_RS36425 PF13560 Helix-turn-helix domain AMIR_RS36430 PF04542 Sigma-70 region 2 AMIR_RS36430 PF13490 Putative zinc-finger AMIR_RS36435 PF14021 AMIR_RS36435 AMIR_RS36450 PF00702 haloacid dehalogenase-like hydrolase AMIR_RS36455 PF02575 YbaB/EbfC DNA-binding family AMIR_RS36465 PF14021 AMIR_RS36465 AMIR_RS36480 PF02470 AMIR_RS36480 AMIR_RS36500 PF13453 AMIR_RS36500 AMIR_RS36505 PF00440 Bacterial regulatory proteins, tetR family AMIR_RS36510 PF03816 Cell envelope-related transcriptional attenuator domain AMIR_RS36510 PF13399 LytR cell envelope-related transcriptional attenuator AMIR_RS36515 PF00823 PPE family AMIR_RS36520 PF13560 Helix-turn-helix domain AMIR_RS36525 PF00823 PPE family AMIR_RS36535 PF12079 AMIR_RS36535 AMIR_RS36550 PF01661 Macro domain AMIR_RS36575 PF00929 Exonuclease