AMIR_RS00005 SM00382 ATPases associated with a variety of cellular activities AMIR_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AMIR_RS00010 SM00480 DNA polymerase III beta subunit AMIR_RS00015 SM01350 AMIR_RS00015 AMIR_RS00030 SM00387 Histidine kinase-like ATPases AMIR_RS00030 SM00433 TopoisomeraseII AMIR_RS00035 SM00434 DNA Topoisomerase IV AMIR_RS00105 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS00105 SM00740 AMIR_RS00105 AMIR_RS00110 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS00125 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS00125 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIR_RS00130 SM00240 Forkhead associated domain AMIR_RS00135 SM00240 Forkhead associated domain AMIR_RS00190 SM00028 Tetratricopeptide repeats AMIR_RS00190 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS00240 SM00822 AMIR_RS00240 AMIR_RS00325 SM00387 Histidine kinase-like ATPases AMIR_RS00335 SM00448 cheY-homologous receiver domain AMIR_RS00335 SM00850 LytTr DNA-binding domain AMIR_RS00370 SM00450 Rhodanese Homology Domain AMIR_RS00455 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS00470 SM00255 Toll - interleukin 1 - resistance AMIR_RS00475 SM00382 ATPases associated with a variety of cellular activities AMIR_RS00480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS00480 SM00387 Histidine kinase-like ATPases AMIR_RS00485 SM00421 helix_turn_helix, Lux Regulon AMIR_RS00485 SM00448 cheY-homologous receiver domain AMIR_RS00505 SM00855 Phosphoglycerate mutase family AMIR_RS00535 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS00550 SM00458 Ricin-type beta-trefoil AMIR_RS00550 SM00606 Cellulose Binding Domain Type IV AMIR_RS00675 SM00382 ATPases associated with a variety of cellular activities AMIR_RS00705 SM00829 Enoylreductase AMIR_RS00730 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS00855 SM00060 Fibronectin type 3 domain AMIR_RS00925 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS00940 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS00980 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS01005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS01005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS01010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS01010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS01020 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01030 SM00493 AMIR_RS01030 AMIR_RS01055 SM00028 Tetratricopeptide repeats AMIR_RS01055 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS01055 SM01043 Bacterial transcriptional activator domain AMIR_RS01075 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01080 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01095 SM00917 LeuA allosteric (dimerisation) domain AMIR_RS01120 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS01130 SM00357 Cold shock protein domain AMIR_RS01140 SM01060 AMIR_RS01140 AMIR_RS01210 SM00740 AMIR_RS01210 AMIR_RS01270 SM00849 Metallo-beta-lactamase superfamily AMIR_RS01285 SM00480 DNA polymerase III beta subunit AMIR_RS01295 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS01295 SM00419 helix_turn_helix, cAMP Regulatory protein AMIR_RS01305 SM00478 endonuclease III AMIR_RS01305 SM00525 AMIR_RS01305 AMIR_RS01365 SM00344 helix_turn_helix ASNC type AMIR_RS01440 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMIR_RS01445 SM00487 DEAD-like helicases superfamily AMIR_RS01445 SM00490 helicase superfamily c-terminal domain AMIR_RS01480 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMIR_RS01480 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMIR_RS01480 SM00493 AMIR_RS01480 AMIR_RS01520 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01530 SM00894 Excalibur calcium-binding domain AMIR_RS01535 SM00894 Excalibur calcium-binding domain AMIR_RS01550 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS01590 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS01595 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01610 SM00905 Dihydroneopterin aldolase AMIR_RS01695 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01705 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01705 SM01086 C-terminal, D2-small domain, of ClpB protein AMIR_RS01745 SM00478 endonuclease III AMIR_RS01745 SM00525 AMIR_RS01745 AMIR_RS01750 SM00947 Carbonic anhydrase AMIR_RS01760 SM00354 helix_turn _helix lactose operon repressor AMIR_RS01765 SM00354 helix_turn _helix lactose operon repressor AMIR_RS01785 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01795 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01805 SM00267 diguanylate cyclase AMIR_RS01825 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS01830 SM00840 AMIR_RS01830 AMIR_RS01850 SM01058 CarD-like/TRCF domain AMIR_RS01860 SM00382 ATPases associated with a variety of cellular activities AMIR_RS01865 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS01870 SM00822 AMIR_RS01870 AMIR_RS01895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS01900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS01900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS01905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS01905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS01910 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS01915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS01915 SM00387 Histidine kinase-like ATPases AMIR_RS01915 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS01920 SM00448 cheY-homologous receiver domain AMIR_RS01920 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS01930 SM00900 AMIR_RS01930 AMIR_RS01950 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS01950 SM01043 Bacterial transcriptional activator domain AMIR_RS01995 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS02000 SM00822 AMIR_RS02000 AMIR_RS02020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS02020 SM00895 AMIR_RS02020 AMIR_RS02045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS02045 SM00866 AMIR_RS02045 AMIR_RS02080 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS02095 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS02110 SM00822 AMIR_RS02110 AMIR_RS02130 SM00829 Enoylreductase AMIR_RS02170 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS02170 SM00895 AMIR_RS02170 AMIR_RS02180 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02180 SM01073 Cell division protein 48 (CDC48) N-terminal domain AMIR_RS02210 SM00852 Probable molybdopterin binding domain AMIR_RS02220 SM00357 Cold shock protein domain AMIR_RS02225 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS02280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS02285 SM00487 DEAD-like helicases superfamily AMIR_RS02285 SM00490 helicase superfamily c-terminal domain AMIR_RS02310 SM00387 Histidine kinase-like ATPases AMIR_RS02315 SM00960 Roadblock/LC7 domain AMIR_RS02345 SM00919 Malic enzyme, NAD binding domain AMIR_RS02345 SM01274 AMIR_RS02345 AMIR_RS02355 SM00852 Probable molybdopterin binding domain AMIR_RS02365 SM00257 Lysin motif AMIR_RS02375 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS02380 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS02425 SM00357 Cold shock protein domain AMIR_RS02465 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS02485 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02570 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02585 SM00421 helix_turn_helix, Lux Regulon AMIR_RS02585 SM00448 cheY-homologous receiver domain AMIR_RS02615 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02620 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02675 SM00421 helix_turn_helix, Lux Regulon AMIR_RS02675 SM00448 cheY-homologous receiver domain AMIR_RS02680 SM00387 Histidine kinase-like ATPases AMIR_RS02690 SM00382 ATPases associated with a variety of cellular activities AMIR_RS02695 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS02720 SM00829 Enoylreductase AMIR_RS02820 SM00421 helix_turn_helix, Lux Regulon AMIR_RS02830 SM00320 WD40 repeats AMIR_RS02835 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS02835 SM01009 AlkA N-terminal domain AMIR_RS02895 SM00028 Tetratricopeptide repeats AMIR_RS02895 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS02895 SM01043 Bacterial transcriptional activator domain AMIR_RS02980 SM00487 DEAD-like helicases superfamily AMIR_RS02980 SM00490 helicase superfamily c-terminal domain AMIR_RS03015 SM00421 helix_turn_helix, Lux Regulon AMIR_RS03015 SM00448 cheY-homologous receiver domain AMIR_RS03020 SM00267 diguanylate cyclase AMIR_RS03050 SM00855 Phosphoglycerate mutase family AMIR_RS03070 SM00448 cheY-homologous receiver domain AMIR_RS03070 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS03075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS03075 SM00387 Histidine kinase-like ATPases AMIR_RS03075 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS03100 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS03100 SM01134 AMIR_RS03100 AMIR_RS03110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIR_RS03120 SM00852 Probable molybdopterin binding domain AMIR_RS03130 SM00858 AMIR_RS03130 AMIR_RS03150 SM00852 Probable molybdopterin binding domain AMIR_RS03170 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS03185 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS03230 SM01208 AMIR_RS03230 AMIR_RS03235 SM00650 Ribosomal RNA adenine dimethylases AMIR_RS03240 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03240 SM00930 AMIR_RS03240 AMIR_RS03260 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03300 SM01400 AMIR_RS03300 AMIR_RS03310 SM00267 diguanylate cyclase AMIR_RS03350 SM00487 DEAD-like helicases superfamily AMIR_RS03350 SM00490 helicase superfamily c-terminal domain AMIR_RS03350 SM00982 AMIR_RS03350 AMIR_RS03350 SM01058 CarD-like/TRCF domain AMIR_RS03365 SM00245 tail specific protease AMIR_RS03375 SM00028 Tetratricopeptide repeats AMIR_RS03380 SM01192 AMIR_RS03380 AMIR_RS03380 SM01193 AMIR_RS03380 AMIR_RS03420 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03425 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03435 SM00986 Uracil DNA glycosylase superfamily AMIR_RS03435 SM00987 UreE urease accessory protein, C-terminal domain AMIR_RS03525 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS03555 SM00344 helix_turn_helix ASNC type AMIR_RS03610 SM00670 Large family of predicted nucleotide-binding domains AMIR_RS03615 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS03615 SM01240 AMIR_RS03615 AMIR_RS03640 SM00020 Trypsin-like serine protease AMIR_RS03700 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS03700 SM01009 AlkA N-terminal domain AMIR_RS03760 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03775 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03785 SM00448 cheY-homologous receiver domain AMIR_RS03785 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS03790 SM00387 Histidine kinase-like ATPases AMIR_RS03790 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS03835 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03840 SM00382 ATPases associated with a variety of cellular activities AMIR_RS03895 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS03930 SM00829 Enoylreductase AMIR_RS04000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIR_RS04015 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS04025 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS04025 SM00924 MgtE intracellular N domain AMIR_RS04065 SM00382 ATPases associated with a variety of cellular activities AMIR_RS04105 SM00481 DNA polymerase alpha chain like domain AMIR_RS04125 SM00487 DEAD-like helicases superfamily AMIR_RS04125 SM00490 helicase superfamily c-terminal domain AMIR_RS04170 SM00450 Rhodanese Homology Domain AMIR_RS04205 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS04225 SM00448 cheY-homologous receiver domain AMIR_RS04225 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS04230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS04230 SM00387 Histidine kinase-like ATPases AMIR_RS04230 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS04275 SM00028 Tetratricopeptide repeats AMIR_RS04305 SM00411 bacterial (prokaryotic) histone like domain AMIR_RS04380 SM00226 Low molecular weight phosphatase family AMIR_RS04385 SM00507 HNH nucleases AMIR_RS04405 SM00855 Phosphoglycerate mutase family AMIR_RS04475 SM00560 LamG-like jellyroll fold domain AMIR_RS04480 SM00382 ATPases associated with a variety of cellular activities AMIR_RS04495 SM00382 ATPases associated with a variety of cellular activities AMIR_RS04510 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS04545 SM01230 AMIR_RS04545 AMIR_RS04595 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS04635 SM01230 AMIR_RS04635 AMIR_RS04655 SM00341 Helicase and RNase D C-terminal AMIR_RS04705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIR_RS04745 SM00937 AMIR_RS04745 AMIR_RS04750 SM00382 ATPases associated with a variety of cellular activities AMIR_RS04765 SM00421 helix_turn_helix, Lux Regulon AMIR_RS04765 SM00448 cheY-homologous receiver domain AMIR_RS04780 SM00487 DEAD-like helicases superfamily AMIR_RS04780 SM00490 helicase superfamily c-terminal domain AMIR_RS04780 SM00847 Helicase associated domain (HA2) Add an annotation AMIR_RS04815 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS04820 SM00487 DEAD-like helicases superfamily AMIR_RS04855 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS04900 SM00354 helix_turn _helix lactose operon repressor AMIR_RS04945 SM01007 Class II Aldolase and Adducin N-terminal domain AMIR_RS04985 SM00155 Phospholipase D. Active site motifs. AMIR_RS04990 SM00487 DEAD-like helicases superfamily AMIR_RS04990 SM00491 AMIR_RS04990 AMIR_RS05060 SM00232 JAB/MPN domain AMIR_RS05075 SM00849 Metallo-beta-lactamase superfamily AMIR_RS05095 SM00849 Metallo-beta-lactamase superfamily AMIR_RS05155 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS05180 SM00829 Enoylreductase AMIR_RS05195 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS05230 SM00357 Cold shock protein domain AMIR_RS05240 SM00776 AMIR_RS05240 AMIR_RS05255 SM00487 DEAD-like helicases superfamily AMIR_RS05255 SM00490 helicase superfamily c-terminal domain AMIR_RS05300 SM00382 ATPases associated with a variety of cellular activities AMIR_RS05310 SM00479 AMIR_RS05310 AMIR_RS05320 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS05325 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS05325 SM01134 AMIR_RS05325 AMIR_RS05365 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS05375 SM00028 Tetratricopeptide repeats AMIR_RS05400 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS05405 SM00606 Cellulose Binding Domain Type IV AMIR_RS05410 SM00482 DNA polymerase A domain AMIR_RS05460 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS05480 SM00880 AMIR_RS05480 AMIR_RS05480 SM01118 AMIR_RS05480 AMIR_RS05525 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS05610 SM00354 helix_turn _helix lactose operon repressor AMIR_RS05640 SM00382 ATPases associated with a variety of cellular activities AMIR_RS05655 SM00382 ATPases associated with a variety of cellular activities AMIR_RS05670 SM00632 AMIR_RS05670 AMIR_RS05670 SM00642 Alpha-amylase domain AMIR_RS05670 SM01065 Starch binding domain AMIR_RS05675 SM00354 helix_turn _helix lactose operon repressor AMIR_RS05690 SM00642 Alpha-amylase domain AMIR_RS05710 SM00507 HNH nucleases AMIR_RS05755 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS05755 SM01232 AMIR_RS05755 AMIR_RS05800 SM00382 ATPases associated with a variety of cellular activities AMIR_RS05800 SM00994 ClpX C4-type zinc finger AMIR_RS05800 SM01086 C-terminal, D2-small domain, of ClpB protein AMIR_RS05870 SM00642 Alpha-amylase domain AMIR_RS05880 SM00562 AMIR_RS05880 AMIR_RS05885 SM00382 ATPases associated with a variety of cellular activities AMIR_RS05900 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS05910 SM00028 Tetratricopeptide repeats AMIR_RS05910 SM00421 helix_turn_helix, Lux Regulon AMIR_RS05940 SM00316 Ribosomal protein S1-like RNA-binding domain AMIR_RS05960 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMIR_RS05975 SM00487 DEAD-like helicases superfamily AMIR_RS05975 SM00490 helicase superfamily c-terminal domain AMIR_RS06005 SM00855 Phosphoglycerate mutase family AMIR_RS06020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIR_RS06025 SM00849 Metallo-beta-lactamase superfamily AMIR_RS06070 SM00244 prohibitin homologues AMIR_RS06090 SM00460 Transglutaminase/protease-like homologues AMIR_RS06095 SM00838 Elongation factor G C-terminus AMIR_RS06115 SM00636 AMIR_RS06115 AMIR_RS06140 SM00829 Enoylreductase AMIR_RS06180 SM00382 ATPases associated with a variety of cellular activities AMIR_RS06215 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS06225 SM00271 DnaJ molecular chaperone homology domain AMIR_RS06260 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIR_RS06260 SM00322 K homology RNA-binding domain AMIR_RS06270 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS06270 SM01091 Transporter associated domain AMIR_RS06325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS06355 SM00947 Carbonic anhydrase AMIR_RS06365 SM00093 SERine Proteinase INhibitors AMIR_RS06370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIR_RS06390 SM00400 zinc finger AMIR_RS06390 SM00493 AMIR_RS06390 AMIR_RS06390 SM00766 DNA primase DnaG DnaB-binding AMIR_RS06415 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS06415 SM00866 AMIR_RS06415 AMIR_RS06435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS06435 SM00866 AMIR_RS06435 AMIR_RS06545 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS06545 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS06555 SM00052 Putative diguanylate phosphodiesterase AMIR_RS06555 SM00091 PAS domain AMIR_RS06555 SM00267 diguanylate cyclase AMIR_RS06565 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS06620 SM00382 ATPases associated with a variety of cellular activities AMIR_RS06625 SM00382 ATPases associated with a variety of cellular activities AMIR_RS06630 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS06630 SM01260 AMIR_RS06630 AMIR_RS06640 SM00825 Beta-ketoacyl synthase AMIR_RS06655 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS06720 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS06745 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS06760 SM00014 Acid phosphatase homologues AMIR_RS06865 SM00563 Phosphate acyltransferases AMIR_RS06910 SM00465 GIY-YIG type nucleases (URI domain) AMIR_RS06910 SM00479 AMIR_RS06910 AMIR_RS06980 SM00563 Phosphate acyltransferases AMIR_RS07000 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS07000 SM00740 AMIR_RS07000 AMIR_RS07075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS07075 SM00895 AMIR_RS07075 AMIR_RS07085 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07085 SM00487 DEAD-like helicases superfamily AMIR_RS07085 SM00490 helicase superfamily c-terminal domain AMIR_RS07110 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07235 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS07245 SM00387 Histidine kinase-like ATPases AMIR_RS07245 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS07250 SM00448 cheY-homologous receiver domain AMIR_RS07250 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS07255 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07260 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS07315 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS07340 SM00529 Helix-turn-helix diphteria tox regulatory element AMIR_RS07340 SM00899 AMIR_RS07340 AMIR_RS07345 SM00450 Rhodanese Homology Domain AMIR_RS07360 SM00881 CoA binding domain AMIR_RS07365 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS07365 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIR_RS07370 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS07370 SM00866 AMIR_RS07370 AMIR_RS07400 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07455 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS07460 SM01130 AMIR_RS07460 AMIR_RS07465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS07535 SM00487 DEAD-like helicases superfamily AMIR_RS07545 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07645 SM00861 Transketolase, pyrimidine binding domain AMIR_RS07655 SM00448 cheY-homologous receiver domain AMIR_RS07655 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS07660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS07660 SM00387 Histidine kinase-like ATPases AMIR_RS07660 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS07770 SM00422 helix_turn_helix, mercury resistance AMIR_RS07775 SM00341 Helicase and RNase D C-terminal AMIR_RS07775 SM00474 3'-5' exonuclease AMIR_RS07780 SM00421 helix_turn_helix, Lux Regulon AMIR_RS07780 SM00448 cheY-homologous receiver domain AMIR_RS07875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS07875 SM00895 AMIR_RS07875 AMIR_RS07950 SM00382 ATPases associated with a variety of cellular activities AMIR_RS07975 SM00855 Phosphoglycerate mutase family AMIR_RS08010 SM00957 SecA DEAD-like domain AMIR_RS08010 SM00958 SecA preprotein cross-linking domain AMIR_RS08035 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS08045 SM00479 AMIR_RS08045 AMIR_RS08070 SM00822 AMIR_RS08070 AMIR_RS08080 SM00829 Enoylreductase AMIR_RS08110 SM00563 Phosphate acyltransferases AMIR_RS08115 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08120 SM00421 helix_turn_helix, Lux Regulon AMIR_RS08120 SM00448 cheY-homologous receiver domain AMIR_RS08365 SM00458 Ricin-type beta-trefoil AMIR_RS08370 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS08390 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08395 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08435 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08450 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08465 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS08465 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIR_RS08490 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIR_RS08505 SM00267 diguanylate cyclase AMIR_RS08510 SM01323 AMIR_RS08510 AMIR_RS08530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIR_RS08530 SM00954 Region found in RelA / SpoT proteins AMIR_RS08540 SM00849 Metallo-beta-lactamase superfamily AMIR_RS08610 SM00878 Biotin carboxylase C-terminal domain AMIR_RS08655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS08655 SM00387 Histidine kinase-like ATPases AMIR_RS08655 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS08660 SM00448 cheY-homologous receiver domain AMIR_RS08660 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS08685 SM00363 S4 RNA-binding domain AMIR_RS08805 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS08810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS08810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS08825 SM00421 helix_turn_helix, Lux Regulon AMIR_RS08845 SM00316 Ribosomal protein S1-like RNA-binding domain AMIR_RS08845 SM00732 Likely ribonuclease with RNase H fold. AMIR_RS08895 SM00382 ATPases associated with a variety of cellular activities AMIR_RS08905 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS08975 SM00354 helix_turn _helix lactose operon repressor AMIR_RS08985 SM00637 AMIR_RS08985 AMIR_RS08995 SM00320 WD40 repeats AMIR_RS08995 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS09040 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS09040 SM00871 Bacterial transcription activator, effector binding domain AMIR_RS09045 SM00829 Enoylreductase AMIR_RS09055 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS09090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS09115 SM00422 helix_turn_helix, mercury resistance AMIR_RS09140 SM00060 Fibronectin type 3 domain AMIR_RS09140 SM00637 AMIR_RS09140 AMIR_RS09150 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09155 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09160 SM01217 AMIR_RS09160 AMIR_RS09180 SM00060 Fibronectin type 3 domain AMIR_RS09180 SM00637 AMIR_RS09180 AMIR_RS09185 SM00637 AMIR_RS09185 AMIR_RS09205 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS09215 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS09230 SM00098 Alkaline phosphatase homologues AMIR_RS09240 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09245 SM00656 AMIR_RS09245 AMIR_RS09270 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS09275 SM00656 AMIR_RS09275 AMIR_RS09275 SM00710 Parallel beta-helix repeats AMIR_RS09285 SM00458 Ricin-type beta-trefoil AMIR_RS09305 SM00382 ATPases associated with a variety of cellular activities AMIR_RS09320 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIR_RS09330 SM00560 LamG-like jellyroll fold domain AMIR_RS09335 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09345 SM01007 Class II Aldolase and Adducin N-terminal domain AMIR_RS09360 SM00382 ATPases associated with a variety of cellular activities AMIR_RS09375 SM00637 AMIR_RS09375 AMIR_RS09380 SM00710 Parallel beta-helix repeats AMIR_RS09390 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09435 SM00421 helix_turn_helix, Lux Regulon AMIR_RS09435 SM00448 cheY-homologous receiver domain AMIR_RS09445 SM01400 AMIR_RS09445 AMIR_RS09455 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS09465 SM00382 ATPases associated with a variety of cellular activities AMIR_RS09510 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS09550 SM00829 Enoylreductase AMIR_RS09560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS09560 SM00387 Histidine kinase-like ATPases AMIR_RS09570 SM00421 helix_turn_helix, Lux Regulon AMIR_RS09570 SM00448 cheY-homologous receiver domain AMIR_RS09575 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS09585 SM00881 CoA binding domain AMIR_RS09650 SM00354 helix_turn _helix lactose operon repressor AMIR_RS09670 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIR_RS09685 SM00448 cheY-homologous receiver domain AMIR_RS09685 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS09705 SM00421 helix_turn_helix, Lux Regulon AMIR_RS09705 SM00448 cheY-homologous receiver domain AMIR_RS09720 SM00382 ATPases associated with a variety of cellular activities AMIR_RS09735 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS09755 SM00382 ATPases associated with a variety of cellular activities AMIR_RS09790 SM00387 Histidine kinase-like ATPases AMIR_RS09790 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS09800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS09800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS09845 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS09865 SM00421 helix_turn_helix, Lux Regulon AMIR_RS09925 SM01217 AMIR_RS09925 AMIR_RS09930 SM00354 helix_turn _helix lactose operon repressor AMIR_RS10050 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS10065 SM00421 helix_turn_helix, Lux Regulon AMIR_RS10065 SM00448 cheY-homologous receiver domain AMIR_RS10175 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS10190 SM00382 ATPases associated with a variety of cellular activities AMIR_RS10235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIR_RS10275 SM00060 Fibronectin type 3 domain AMIR_RS10275 SM00637 AMIR_RS10275 AMIR_RS10290 SM00382 ATPases associated with a variety of cellular activities AMIR_RS10325 SM00382 ATPases associated with a variety of cellular activities AMIR_RS10365 SM00387 Histidine kinase-like ATPases AMIR_RS10370 SM00960 Roadblock/LC7 domain AMIR_RS10415 SM01230 AMIR_RS10415 AMIR_RS10435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS10435 SM00895 AMIR_RS10435 AMIR_RS10455 SM00382 ATPases associated with a variety of cellular activities AMIR_RS10475 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS10565 SM00838 Elongation factor G C-terminus AMIR_RS10565 SM00889 Elongation factor G, domain IV AMIR_RS10670 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS10700 SM00382 ATPases associated with a variety of cellular activities AMIR_RS10725 SM01057 Eukaryotic-type carbonic anhydrase AMIR_RS10770 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS10785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS10785 SM00387 Histidine kinase-like ATPases AMIR_RS10785 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS10790 SM00448 cheY-homologous receiver domain AMIR_RS10790 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS10795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS10795 SM01012 AMIR_RS10795 AMIR_RS10865 SM00637 AMIR_RS10865 AMIR_RS10870 SM00637 AMIR_RS10870 AMIR_RS10875 SM01217 AMIR_RS10875 AMIR_RS10880 SM00354 helix_turn _helix lactose operon repressor AMIR_RS10915 SM00422 helix_turn_helix, mercury resistance AMIR_RS10935 SM00822 AMIR_RS10935 AMIR_RS10960 SM00822 AMIR_RS10960 AMIR_RS10990 SM00637 AMIR_RS10990 AMIR_RS11000 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS11015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS11015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS11065 SM00448 cheY-homologous receiver domain AMIR_RS11065 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS11070 SM00448 cheY-homologous receiver domain AMIR_RS11075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS11075 SM00387 Histidine kinase-like ATPases AMIR_RS11075 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS11085 SM01018 B12 binding domain AMIR_RS11110 SM00822 AMIR_RS11110 AMIR_RS11155 SM00421 helix_turn_helix, Lux Regulon AMIR_RS11155 SM00448 cheY-homologous receiver domain AMIR_RS11185 SM00382 ATPases associated with a variety of cellular activities AMIR_RS11190 SM00421 helix_turn_helix, Lux Regulon AMIR_RS11190 SM00448 cheY-homologous receiver domain AMIR_RS11200 SM00382 ATPases associated with a variety of cellular activities AMIR_RS11245 SM00822 AMIR_RS11245 AMIR_RS11255 SM00382 ATPases associated with a variety of cellular activities AMIR_RS11255 SM00421 helix_turn_helix, Lux Regulon AMIR_RS11260 SM00014 Acid phosphatase homologues AMIR_RS11260 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIR_RS11300 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIR_RS11305 SM00487 DEAD-like helicases superfamily AMIR_RS11305 SM00490 helicase superfamily c-terminal domain AMIR_RS11305 SM01142 AMIR_RS11305 AMIR_RS11320 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMIR_RS11320 SM00475 5'-3' exonuclease AMIR_RS11330 SM00344 helix_turn_helix ASNC type AMIR_RS11345 SM00267 diguanylate cyclase AMIR_RS11370 SM00487 DEAD-like helicases superfamily AMIR_RS11370 SM00490 helicase superfamily c-terminal domain AMIR_RS11375 SM00954 Region found in RelA / SpoT proteins AMIR_RS11390 SM00867 YceI-like domain AMIR_RS11395 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS11435 SM00387 Histidine kinase-like ATPases AMIR_RS11435 SM00433 TopoisomeraseII AMIR_RS11440 SM00434 DNA Topoisomerase IV AMIR_RS11490 SM00382 ATPases associated with a variety of cellular activities AMIR_RS11565 SM00704 CDGSH-type zinc finger. Function unknown. AMIR_RS11570 SM01236 AMIR_RS11570 AMIR_RS11610 SM00448 cheY-homologous receiver domain AMIR_RS11620 SM00448 cheY-homologous receiver domain AMIR_RS11625 SM00138 Methyltransferase, chemotaxis proteins AMIR_RS11630 SM00448 cheY-homologous receiver domain AMIR_RS11640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS11640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS11645 SM00260 Two component signalling adaptor domain AMIR_RS11650 SM00073 Histidine Phosphotransfer domain AMIR_RS11650 SM00260 Two component signalling adaptor domain AMIR_RS11650 SM00387 Histidine kinase-like ATPases AMIR_RS11650 SM01231 AMIR_RS11650 AMIR_RS11745 SM00382 ATPases associated with a variety of cellular activities AMIR_RS11835 SM00091 PAS domain AMIR_RS11835 SM00387 Histidine kinase-like ATPases AMIR_RS11835 SM00448 cheY-homologous receiver domain AMIR_RS11840 SM00448 cheY-homologous receiver domain AMIR_RS11850 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS11855 SM00091 PAS domain AMIR_RS11855 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS11865 SM00448 cheY-homologous receiver domain AMIR_RS11875 SM00091 PAS domain AMIR_RS11875 SM00387 Histidine kinase-like ATPases AMIR_RS11875 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS11875 SM00448 cheY-homologous receiver domain AMIR_RS11880 SM00448 cheY-homologous receiver domain AMIR_RS11885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS11885 SM00895 AMIR_RS11885 AMIR_RS11905 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS11910 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS11925 SM00387 Histidine kinase-like ATPases AMIR_RS11925 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS11940 SM00344 helix_turn_helix ASNC type AMIR_RS11970 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS11985 SM00387 Histidine kinase-like ATPases AMIR_RS12040 SM00354 helix_turn _helix lactose operon repressor AMIR_RS12065 SM00382 ATPases associated with a variety of cellular activities AMIR_RS12070 SM00421 helix_turn_helix, Lux Regulon AMIR_RS12070 SM00448 cheY-homologous receiver domain AMIR_RS12170 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS12190 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS12190 SM01134 AMIR_RS12190 AMIR_RS12210 SM00974 AMIR_RS12210 AMIR_RS12220 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS12235 SM00829 Enoylreductase AMIR_RS12285 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS12290 SM00382 ATPases associated with a variety of cellular activities AMIR_RS12315 SM00829 Enoylreductase AMIR_RS12330 SM00448 cheY-homologous receiver domain AMIR_RS12330 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS12335 SM00387 Histidine kinase-like ATPases AMIR_RS12335 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS12345 SM00560 LamG-like jellyroll fold domain AMIR_RS12345 SM00758 AMIR_RS12345 AMIR_RS12355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS12355 SM00895 AMIR_RS12355 AMIR_RS12430 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS12445 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS12475 SM00822 AMIR_RS12475 AMIR_RS12475 SM00825 Beta-ketoacyl synthase AMIR_RS12475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS12480 SM00825 Beta-ketoacyl synthase AMIR_RS12480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS12500 SM00382 ATPases associated with a variety of cellular activities AMIR_RS12510 SM00644 AMIR_RS12510 AMIR_RS12515 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMIR_RS12570 SM00382 ATPases associated with a variety of cellular activities AMIR_RS12590 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS12600 SM01060 AMIR_RS12600 AMIR_RS12615 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMIR_RS12635 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS12650 SM00422 helix_turn_helix, mercury resistance AMIR_RS12650 SM00871 Bacterial transcription activator, effector binding domain AMIR_RS12665 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS12670 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS12700 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS12705 SM00487 DEAD-like helicases superfamily AMIR_RS12705 SM00490 helicase superfamily c-terminal domain AMIR_RS12715 SM00344 helix_turn_helix ASNC type AMIR_RS12830 SM01119 AMIR_RS12830 AMIR_RS12880 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIR_RS12890 SM00354 helix_turn _helix lactose operon repressor AMIR_RS12935 SM00633 Glycosyl hydrolase family 10 AMIR_RS12935 SM00637 AMIR_RS12935 AMIR_RS12970 SM00506 Appr-1"-p processing enzyme AMIR_RS12995 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS13025 SM01012 AMIR_RS13025 AMIR_RS13050 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS13070 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS13100 SM00904 Riboflavin kinase AMIR_RS13130 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS13145 SM00387 Histidine kinase-like ATPases AMIR_RS13145 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS13150 SM00448 cheY-homologous receiver domain AMIR_RS13150 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS13155 SM01091 Transporter associated domain AMIR_RS13165 SM00829 Enoylreductase AMIR_RS13175 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIR_RS13215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS13215 SM00895 AMIR_RS13215 AMIR_RS13225 SM01120 AMIR_RS13225 AMIR_RS13250 SM01101 AMIR_RS13250 AMIR_RS13330 SM01209 AMIR_RS13330 AMIR_RS13380 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13390 SM00824 Thioesterase AMIR_RS13405 SM00822 AMIR_RS13405 AMIR_RS13405 SM00823 Phosphopantetheine attachment site AMIR_RS13405 SM00825 Beta-ketoacyl synthase AMIR_RS13405 SM00826 AMIR_RS13405 AMIR_RS13405 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS13405 SM01294 AMIR_RS13405 AMIR_RS13410 SM00822 AMIR_RS13410 AMIR_RS13410 SM00823 Phosphopantetheine attachment site AMIR_RS13410 SM00825 Beta-ketoacyl synthase AMIR_RS13410 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS13410 SM01294 AMIR_RS13410 AMIR_RS13415 SM00822 AMIR_RS13415 AMIR_RS13415 SM00823 Phosphopantetheine attachment site AMIR_RS13415 SM00825 Beta-ketoacyl synthase AMIR_RS13415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS13415 SM01294 AMIR_RS13415 AMIR_RS13480 SM00822 AMIR_RS13480 AMIR_RS13480 SM00823 Phosphopantetheine attachment site AMIR_RS13480 SM00825 Beta-ketoacyl synthase AMIR_RS13480 SM00826 AMIR_RS13480 AMIR_RS13480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS13480 SM01294 AMIR_RS13480 AMIR_RS13485 SM00421 helix_turn_helix, Lux Regulon AMIR_RS13490 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13500 SM00421 helix_turn_helix, Lux Regulon AMIR_RS13500 SM00448 cheY-homologous receiver domain AMIR_RS13505 SM00387 Histidine kinase-like ATPases AMIR_RS13545 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13555 SM00849 Metallo-beta-lactamase superfamily AMIR_RS13570 SM00028 Tetratricopeptide repeats AMIR_RS13585 SM00421 helix_turn_helix, Lux Regulon AMIR_RS13600 SM00823 Phosphopantetheine attachment site AMIR_RS13605 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13665 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13675 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS13690 SM00387 Histidine kinase-like ATPases AMIR_RS13695 SM00421 helix_turn_helix, Lux Regulon AMIR_RS13695 SM00448 cheY-homologous receiver domain AMIR_RS13710 SM01192 AMIR_RS13710 AMIR_RS13710 SM01193 AMIR_RS13710 AMIR_RS13725 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13740 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS13740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS13800 SM00421 helix_turn_helix, Lux Regulon AMIR_RS13800 SM00448 cheY-homologous receiver domain AMIR_RS13805 SM00387 Histidine kinase-like ATPases AMIR_RS13810 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13830 SM00028 Tetratricopeptide repeats AMIR_RS13870 SM00756 AMIR_RS13870 AMIR_RS13895 SM00382 ATPases associated with a variety of cellular activities AMIR_RS13915 SM00637 AMIR_RS13915 AMIR_RS13930 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS13970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS13970 SM01012 AMIR_RS13970 AMIR_RS14025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS14025 SM01012 AMIR_RS14025 AMIR_RS14030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS14030 SM01012 AMIR_RS14030 AMIR_RS14035 SM01012 AMIR_RS14035 AMIR_RS14060 SM00421 helix_turn_helix, Lux Regulon AMIR_RS14060 SM00448 cheY-homologous receiver domain AMIR_RS14125 SM00382 ATPases associated with a variety of cellular activities AMIR_RS14135 SM00823 Phosphopantetheine attachment site AMIR_RS14155 SM00354 helix_turn _helix lactose operon repressor AMIR_RS14210 SM00422 helix_turn_helix, mercury resistance AMIR_RS14230 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS14230 SM00895 AMIR_RS14230 AMIR_RS14270 SM00382 ATPases associated with a variety of cellular activities AMIR_RS14380 SM00382 ATPases associated with a variety of cellular activities AMIR_RS14480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS14480 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS14515 SM00823 Phosphopantetheine attachment site AMIR_RS14535 SM00823 Phosphopantetheine attachment site AMIR_RS14555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS14555 SM00387 Histidine kinase-like ATPases AMIR_RS14555 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS14560 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS14565 SM00448 cheY-homologous receiver domain AMIR_RS14620 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS14630 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS14630 SM01043 Bacterial transcriptional activator domain AMIR_RS14655 SM00421 helix_turn_helix, Lux Regulon AMIR_RS14670 SM00382 ATPases associated with a variety of cellular activities AMIR_RS14685 SM00028 Tetratricopeptide repeats AMIR_RS14685 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS14685 SM01043 Bacterial transcriptional activator domain AMIR_RS14760 SM00421 helix_turn_helix, Lux Regulon AMIR_RS14770 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS14770 SM01043 Bacterial transcriptional activator domain AMIR_RS14815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIR_RS14815 SM00292 breast cancer carboxy-terminal domain AMIR_RS14815 SM00532 Ligase N family AMIR_RS14900 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS14935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS14940 SM00354 helix_turn _helix lactose operon repressor AMIR_RS14965 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS15000 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS15020 SM00422 helix_turn_helix, mercury resistance AMIR_RS15025 SM00421 helix_turn_helix, Lux Regulon AMIR_RS15025 SM00448 cheY-homologous receiver domain AMIR_RS15035 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15050 SM00642 Alpha-amylase domain AMIR_RS15110 SM00773 Proposed nucleic acid binding domain AMIR_RS15130 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15195 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS15195 SM00895 AMIR_RS15195 AMIR_RS15205 SM00354 helix_turn _helix lactose operon repressor AMIR_RS15210 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15235 SM01007 Class II Aldolase and Adducin N-terminal domain AMIR_RS15280 SM00710 Parallel beta-helix repeats AMIR_RS15300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS15345 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15350 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15440 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS15445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS15445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS15460 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS15475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS15505 SM00996 S-adenosyl-L-homocysteine hydrolase AMIR_RS15505 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS15525 SM00458 Ricin-type beta-trefoil AMIR_RS15535 SM00458 Ricin-type beta-trefoil AMIR_RS15550 SM00344 helix_turn_helix ASNC type AMIR_RS15595 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS15660 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS15685 SM00822 AMIR_RS15685 AMIR_RS15695 SM01133 AMIR_RS15695 AMIR_RS15700 SM00829 Enoylreductase AMIR_RS15715 SM00873 B3/4 domain AMIR_RS15760 SM00458 Ricin-type beta-trefoil AMIR_RS15790 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS15845 SM00829 Enoylreductase AMIR_RS15860 SM00382 ATPases associated with a variety of cellular activities AMIR_RS15885 SM00822 AMIR_RS15885 AMIR_RS15885 SM00823 Phosphopantetheine attachment site AMIR_RS15885 SM00825 Beta-ketoacyl synthase AMIR_RS15885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS15885 SM01294 AMIR_RS15885 AMIR_RS15890 SM00822 AMIR_RS15890 AMIR_RS15890 SM00823 Phosphopantetheine attachment site AMIR_RS15890 SM00825 Beta-ketoacyl synthase AMIR_RS15890 SM00826 AMIR_RS15890 AMIR_RS15890 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS15890 SM01294 AMIR_RS15890 AMIR_RS15940 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS15940 SM01043 Bacterial transcriptional activator domain AMIR_RS15980 SM00822 AMIR_RS15980 AMIR_RS15980 SM00823 Phosphopantetheine attachment site AMIR_RS15980 SM00825 Beta-ketoacyl synthase AMIR_RS15980 SM00826 AMIR_RS15980 AMIR_RS15980 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS15980 SM00829 Enoylreductase AMIR_RS15980 SM01294 AMIR_RS15980 AMIR_RS15985 SM00822 AMIR_RS15985 AMIR_RS15985 SM00823 Phosphopantetheine attachment site AMIR_RS15985 SM00825 Beta-ketoacyl synthase AMIR_RS15985 SM00826 AMIR_RS15985 AMIR_RS15985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS15985 SM01294 AMIR_RS15985 AMIR_RS15995 SM00822 AMIR_RS15995 AMIR_RS16065 SM00606 Cellulose Binding Domain Type IV AMIR_RS16070 SM00633 Glycosyl hydrolase family 10 AMIR_RS16070 SM00637 AMIR_RS16070 AMIR_RS16075 SM00637 AMIR_RS16075 AMIR_RS16080 SM00060 Fibronectin type 3 domain AMIR_RS16080 SM00637 AMIR_RS16080 AMIR_RS16095 SM00421 helix_turn_helix, Lux Regulon AMIR_RS16095 SM00448 cheY-homologous receiver domain AMIR_RS16110 SM00637 AMIR_RS16110 AMIR_RS16135 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS16140 SM00387 Histidine kinase-like ATPases AMIR_RS16140 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS16200 SM00857 Resolvase, N terminal domain AMIR_RS16360 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. AMIR_RS16445 SM00822 AMIR_RS16445 AMIR_RS16445 SM00823 Phosphopantetheine attachment site AMIR_RS16445 SM00825 Beta-ketoacyl synthase AMIR_RS16445 SM00826 AMIR_RS16445 AMIR_RS16445 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS16445 SM00829 Enoylreductase AMIR_RS16445 SM01294 AMIR_RS16445 AMIR_RS16450 SM00822 AMIR_RS16450 AMIR_RS16450 SM00823 Phosphopantetheine attachment site AMIR_RS16450 SM00825 Beta-ketoacyl synthase AMIR_RS16450 SM00826 AMIR_RS16450 AMIR_RS16450 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS16450 SM01294 AMIR_RS16450 AMIR_RS16455 SM00822 AMIR_RS16455 AMIR_RS16455 SM00823 Phosphopantetheine attachment site AMIR_RS16455 SM00825 Beta-ketoacyl synthase AMIR_RS16455 SM00826 AMIR_RS16455 AMIR_RS16455 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS16455 SM00829 Enoylreductase AMIR_RS16455 SM01294 AMIR_RS16455 AMIR_RS16470 SM00421 helix_turn_helix, Lux Regulon AMIR_RS16480 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS16500 SM00637 AMIR_RS16500 AMIR_RS16505 SM00354 helix_turn _helix lactose operon repressor AMIR_RS16525 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS16525 SM01043 Bacterial transcriptional activator domain AMIR_RS16540 SM00822 AMIR_RS16540 AMIR_RS16555 SM00421 helix_turn_helix, Lux Regulon AMIR_RS16555 SM00448 cheY-homologous receiver domain AMIR_RS16640 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS16680 SM00354 helix_turn _helix lactose operon repressor AMIR_RS16755 SM00849 Metallo-beta-lactamase superfamily AMIR_RS16770 SM00387 Histidine kinase-like ATPases AMIR_RS16785 SM00829 Enoylreductase AMIR_RS16810 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS16865 SM00060 Fibronectin type 3 domain AMIR_RS16885 SM00354 helix_turn _helix lactose operon repressor AMIR_RS16965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS17005 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS17040 SM00052 Putative diguanylate phosphodiesterase AMIR_RS17040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS17040 SM00091 PAS domain AMIR_RS17040 SM00267 diguanylate cyclase AMIR_RS17055 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMIR_RS17075 SM00244 prohibitin homologues AMIR_RS17085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS17095 SM00226 Low molecular weight phosphatase family AMIR_RS17105 SM01012 AMIR_RS17105 AMIR_RS17145 SM00822 AMIR_RS17145 AMIR_RS17155 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS17160 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS17170 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS17170 SM01134 AMIR_RS17170 AMIR_RS17185 SM00479 AMIR_RS17185 AMIR_RS17200 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS17270 SM00382 ATPases associated with a variety of cellular activities AMIR_RS17305 SM00354 helix_turn _helix lactose operon repressor AMIR_RS17405 SM00829 Enoylreductase AMIR_RS17430 SM00637 AMIR_RS17430 AMIR_RS17435 SM00422 helix_turn_helix, mercury resistance AMIR_RS17440 SM00422 helix_turn_helix, mercury resistance AMIR_RS17465 SM00382 ATPases associated with a variety of cellular activities AMIR_RS17495 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS17495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIR_RS17500 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS17505 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS17505 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIR_RS17510 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS17525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS17540 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS17545 SM00382 ATPases associated with a variety of cellular activities AMIR_RS17545 SM00487 DEAD-like helicases superfamily AMIR_RS17545 SM00490 helicase superfamily c-terminal domain AMIR_RS17545 SM00847 Helicase associated domain (HA2) Add an annotation AMIR_RS17560 SM00855 Phosphoglycerate mutase family AMIR_RS17625 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS17635 SM00637 AMIR_RS17635 AMIR_RS17640 SM00458 Ricin-type beta-trefoil AMIR_RS17645 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS17660 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS17660 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS17800 SM00028 Tetratricopeptide repeats AMIR_RS17800 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS17800 SM01043 Bacterial transcriptional activator domain AMIR_RS17810 SM00421 helix_turn_helix, Lux Regulon AMIR_RS17815 SM00421 helix_turn_helix, Lux Regulon AMIR_RS17830 SM00823 Phosphopantetheine attachment site AMIR_RS17835 SM00823 Phosphopantetheine attachment site AMIR_RS17840 SM00923 MbtH-like protein AMIR_RS17860 SM00823 Phosphopantetheine attachment site AMIR_RS17900 SM00382 ATPases associated with a variety of cellular activities AMIR_RS17910 SM00422 helix_turn_helix, mercury resistance AMIR_RS17945 SM00923 MbtH-like protein AMIR_RS17950 SM00823 Phosphopantetheine attachment site AMIR_RS17950 SM00824 Thioesterase AMIR_RS17970 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS18000 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18165 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS18175 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS18260 SM00829 Enoylreductase AMIR_RS18270 SM00248 ankyrin repeats AMIR_RS18275 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18300 SM00923 MbtH-like protein AMIR_RS18315 SM00823 Phosphopantetheine attachment site AMIR_RS18345 SM00823 Phosphopantetheine attachment site AMIR_RS18350 SM00822 AMIR_RS18350 AMIR_RS18350 SM00823 Phosphopantetheine attachment site AMIR_RS18350 SM00825 Beta-ketoacyl synthase AMIR_RS18350 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS18360 SM00823 Phosphopantetheine attachment site AMIR_RS18415 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18420 SM00421 helix_turn_helix, Lux Regulon AMIR_RS18420 SM00448 cheY-homologous receiver domain AMIR_RS18465 SM00387 Histidine kinase-like ATPases AMIR_RS18470 SM00448 cheY-homologous receiver domain AMIR_RS18480 SM00642 Alpha-amylase domain AMIR_RS18490 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18535 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS18535 SM00419 helix_turn_helix, cAMP Regulatory protein AMIR_RS18580 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18590 SM00858 AMIR_RS18590 AMIR_RS18600 SM01007 Class II Aldolase and Adducin N-terminal domain AMIR_RS18605 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS18605 SM01134 AMIR_RS18605 AMIR_RS18610 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMIR_RS18625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS18625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS18625 SM00091 PAS domain AMIR_RS18625 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS18630 SM00028 Tetratricopeptide repeats AMIR_RS18640 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS18640 SM00448 cheY-homologous receiver domain AMIR_RS18645 SM00387 Histidine kinase-like ATPases AMIR_RS18645 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS18650 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS18655 SM00387 Histidine kinase-like ATPases AMIR_RS18685 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS18725 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18730 SM00382 ATPases associated with a variety of cellular activities AMIR_RS18765 SM00422 helix_turn_helix, mercury resistance AMIR_RS18780 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS18785 SM00829 Enoylreductase AMIR_RS18790 SM00849 Metallo-beta-lactamase superfamily AMIR_RS18795 SM00458 Ricin-type beta-trefoil AMIR_RS18920 SM00788 Adenylosuccinate synthetase AMIR_RS18930 SM00458 Ricin-type beta-trefoil AMIR_RS18950 SM00861 Transketolase, pyrimidine binding domain AMIR_RS18975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS18980 SM00960 Roadblock/LC7 domain AMIR_RS19155 SM00054 EF-hand, calcium binding motif AMIR_RS19160 SM00984 UDP binding domain AMIR_RS19170 SM00829 Enoylreductase AMIR_RS19205 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS19240 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS19240 SM01043 Bacterial transcriptional activator domain AMIR_RS19295 SM00448 cheY-homologous receiver domain AMIR_RS19295 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS19385 SM00823 Phosphopantetheine attachment site AMIR_RS19385 SM00824 Thioesterase AMIR_RS19390 SM00822 AMIR_RS19390 AMIR_RS19390 SM00823 Phosphopantetheine attachment site AMIR_RS19390 SM00825 Beta-ketoacyl synthase AMIR_RS19445 SM00829 Enoylreductase AMIR_RS19450 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS19495 SM00382 ATPases associated with a variety of cellular activities AMIR_RS19540 SM01236 AMIR_RS19540 AMIR_RS19630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS19645 SM00458 Ricin-type beta-trefoil AMIR_RS19660 SM00421 helix_turn_helix, Lux Regulon AMIR_RS19695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS19695 SM00091 PAS domain AMIR_RS19695 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS19695 SM00387 Histidine kinase-like ATPases AMIR_RS19695 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS19695 SM00448 cheY-homologous receiver domain AMIR_RS19710 SM00419 helix_turn_helix, cAMP Regulatory protein AMIR_RS19715 SM00656 AMIR_RS19715 AMIR_RS19720 SM00637 AMIR_RS19720 AMIR_RS19740 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS19745 SM00829 Enoylreductase AMIR_RS19780 SM00564 beta-propeller repeat AMIR_RS19805 SM00822 AMIR_RS19805 AMIR_RS19830 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS19845 SM00567 E-Z type HEAT repeats AMIR_RS19875 SM00422 helix_turn_helix, mercury resistance AMIR_RS19880 SM00872 Alpha mannosidase, middle domain AMIR_RS19925 SM00387 Histidine kinase-like ATPases AMIR_RS19930 SM00421 helix_turn_helix, Lux Regulon AMIR_RS19930 SM00448 cheY-homologous receiver domain AMIR_RS19940 SM00824 Thioesterase AMIR_RS20000 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS20025 SM00822 AMIR_RS20025 AMIR_RS20025 SM00823 Phosphopantetheine attachment site AMIR_RS20025 SM00825 Beta-ketoacyl synthase AMIR_RS20025 SM00826 AMIR_RS20025 AMIR_RS20025 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS20025 SM00829 Enoylreductase AMIR_RS20025 SM01294 AMIR_RS20025 AMIR_RS20070 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS20085 SM00458 Ricin-type beta-trefoil AMIR_RS20120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS20120 SM00387 Histidine kinase-like ATPases AMIR_RS20120 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS20145 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS20155 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMIR_RS20160 SM00382 ATPases associated with a variety of cellular activities AMIR_RS20165 SM00382 ATPases associated with a variety of cellular activities AMIR_RS20180 SM00382 ATPases associated with a variety of cellular activities AMIR_RS20190 SM00421 helix_turn_helix, Lux Regulon AMIR_RS20190 SM00448 cheY-homologous receiver domain AMIR_RS20225 SM00849 Metallo-beta-lactamase superfamily AMIR_RS20230 SM00382 ATPases associated with a variety of cellular activities AMIR_RS20270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS20270 SM00387 Histidine kinase-like ATPases AMIR_RS20270 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS20275 SM00448 cheY-homologous receiver domain AMIR_RS20275 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS20285 SM00382 ATPases associated with a variety of cellular activities AMIR_RS20335 SM00903 Flavin reductase like domain AMIR_RS20345 SM00822 AMIR_RS20345 AMIR_RS20345 SM00825 Beta-ketoacyl synthase AMIR_RS20345 SM00826 AMIR_RS20345 AMIR_RS20345 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS20450 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS20460 SM00829 Enoylreductase AMIR_RS20470 SM00903 Flavin reductase like domain AMIR_RS20475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS20520 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS20545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIR_RS20555 SM00487 DEAD-like helicases superfamily AMIR_RS20555 SM00490 helicase superfamily c-terminal domain AMIR_RS20560 SM00487 DEAD-like helicases superfamily AMIR_RS20560 SM00490 helicase superfamily c-terminal domain AMIR_RS20570 SM00354 helix_turn _helix lactose operon repressor AMIR_RS20580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS20590 SM00637 AMIR_RS20590 AMIR_RS20605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS20605 SM00387 Histidine kinase-like ATPases AMIR_RS20605 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS20610 SM00448 cheY-homologous receiver domain AMIR_RS20610 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS20635 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS20660 SM00458 Ricin-type beta-trefoil AMIR_RS20665 SM00458 Ricin-type beta-trefoil AMIR_RS20670 SM00458 Ricin-type beta-trefoil AMIR_RS20675 SM00637 AMIR_RS20675 AMIR_RS20740 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS20780 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS20790 SM00637 AMIR_RS20790 AMIR_RS20805 SM00458 Ricin-type beta-trefoil AMIR_RS20810 SM00829 Enoylreductase AMIR_RS20815 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS20835 SM00028 Tetratricopeptide repeats AMIR_RS20840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS20840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS20860 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS20870 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS20875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS20875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS20905 SM00458 Ricin-type beta-trefoil AMIR_RS20910 SM00458 Ricin-type beta-trefoil AMIR_RS20910 SM00656 AMIR_RS20910 AMIR_RS20910 SM00710 Parallel beta-helix repeats AMIR_RS20975 SM00450 Rhodanese Homology Domain AMIR_RS21050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS21060 SM00422 helix_turn_helix, mercury resistance AMIR_RS21095 SM00487 DEAD-like helicases superfamily AMIR_RS21095 SM00490 helicase superfamily c-terminal domain AMIR_RS21105 SM00878 Biotin carboxylase C-terminal domain AMIR_RS21135 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS21165 SM00382 ATPases associated with a variety of cellular activities AMIR_RS21200 SM01266 AMIR_RS21200 AMIR_RS21235 SM00421 helix_turn_helix, Lux Regulon AMIR_RS21235 SM00448 cheY-homologous receiver domain AMIR_RS21285 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS21295 SM00421 helix_turn_helix, Lux Regulon AMIR_RS21335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS21350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS21385 SM00382 ATPases associated with a variety of cellular activities AMIR_RS21415 SM01012 AMIR_RS21415 AMIR_RS21450 SM00450 Rhodanese Homology Domain AMIR_RS21470 SM00903 Flavin reductase like domain AMIR_RS21495 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS21500 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS21530 SM00382 ATPases associated with a variety of cellular activities AMIR_RS21560 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS21575 SM00448 cheY-homologous receiver domain AMIR_RS21585 SM00344 helix_turn_helix ASNC type AMIR_RS21640 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS21645 SM00382 ATPases associated with a variety of cellular activities AMIR_RS21650 SM00344 helix_turn_helix ASNC type AMIR_RS21665 SM00448 cheY-homologous receiver domain AMIR_RS21665 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS21670 SM00387 Histidine kinase-like ATPases AMIR_RS21670 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS21690 SM00822 AMIR_RS21690 AMIR_RS21690 SM00823 Phosphopantetheine attachment site AMIR_RS21690 SM00825 Beta-ketoacyl synthase AMIR_RS21690 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS21690 SM01294 AMIR_RS21690 AMIR_RS21695 SM00825 Beta-ketoacyl synthase AMIR_RS21695 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS21705 SM00822 AMIR_RS21705 AMIR_RS21705 SM00823 Phosphopantetheine attachment site AMIR_RS21705 SM00825 Beta-ketoacyl synthase AMIR_RS21705 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS21705 SM01294 AMIR_RS21705 AMIR_RS21785 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIR_RS21795 SM00422 helix_turn_helix, mercury resistance AMIR_RS21870 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS21895 SM00822 AMIR_RS21895 AMIR_RS21905 SM00422 helix_turn_helix, mercury resistance AMIR_RS21915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS21915 SM00895 AMIR_RS21915 AMIR_RS21930 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS21985 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS21990 SM01060 AMIR_RS21990 AMIR_RS22010 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS22015 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS22020 SM00829 Enoylreductase AMIR_RS22025 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS22030 SM00829 Enoylreductase AMIR_RS22035 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS22035 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIR_RS22040 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIR_RS22055 SM00886 Stress responsive A/B Barrel Domain AMIR_RS22060 SM00829 Enoylreductase AMIR_RS22070 SM00421 helix_turn_helix, Lux Regulon AMIR_RS22070 SM00448 cheY-homologous receiver domain AMIR_RS22100 SM00382 ATPases associated with a variety of cellular activities AMIR_RS22110 SM00822 AMIR_RS22110 AMIR_RS22110 SM00823 Phosphopantetheine attachment site AMIR_RS22110 SM00825 Beta-ketoacyl synthase AMIR_RS22110 SM00826 AMIR_RS22110 AMIR_RS22110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS22115 SM00822 AMIR_RS22115 AMIR_RS22115 SM00823 Phosphopantetheine attachment site AMIR_RS22115 SM00825 Beta-ketoacyl synthase AMIR_RS22115 SM00826 AMIR_RS22115 AMIR_RS22115 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS22115 SM01294 AMIR_RS22115 AMIR_RS22120 SM00822 AMIR_RS22120 AMIR_RS22120 SM00823 Phosphopantetheine attachment site AMIR_RS22120 SM00825 Beta-ketoacyl synthase AMIR_RS22120 SM00826 AMIR_RS22120 AMIR_RS22120 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS22120 SM01294 AMIR_RS22120 AMIR_RS22125 SM00822 AMIR_RS22125 AMIR_RS22125 SM00823 Phosphopantetheine attachment site AMIR_RS22125 SM00825 Beta-ketoacyl synthase AMIR_RS22125 SM00826 AMIR_RS22125 AMIR_RS22125 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS22125 SM01294 AMIR_RS22125 AMIR_RS22150 SM00903 Flavin reductase like domain AMIR_RS22165 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS22165 SM01043 Bacterial transcriptional activator domain AMIR_RS22185 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS22200 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS22285 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS22295 SM00829 Enoylreductase AMIR_RS22330 SM00823 Phosphopantetheine attachment site AMIR_RS22375 SM00823 Phosphopantetheine attachment site AMIR_RS22390 SM00823 Phosphopantetheine attachment site AMIR_RS22410 SM00923 MbtH-like protein AMIR_RS22415 SM00823 Phosphopantetheine attachment site AMIR_RS22430 SM00823 Phosphopantetheine attachment site AMIR_RS22455 SM00421 helix_turn_helix, Lux Regulon AMIR_RS22455 SM00448 cheY-homologous receiver domain AMIR_RS22465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS22465 SM00387 Histidine kinase-like ATPases AMIR_RS22465 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS22470 SM00448 cheY-homologous receiver domain AMIR_RS22470 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS22480 SM00637 AMIR_RS22480 AMIR_RS22550 SM00091 PAS domain AMIR_RS22550 SM00421 helix_turn_helix, Lux Regulon AMIR_RS22640 SM00020 Trypsin-like serine protease AMIR_RS22735 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS22820 SM00823 Phosphopantetheine attachment site AMIR_RS22825 SM00823 Phosphopantetheine attachment site AMIR_RS22845 SM00923 MbtH-like protein AMIR_RS22865 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS22865 SM01043 Bacterial transcriptional activator domain AMIR_RS22880 SM00923 MbtH-like protein AMIR_RS22905 SM00822 AMIR_RS22905 AMIR_RS22905 SM00823 Phosphopantetheine attachment site AMIR_RS22905 SM00824 Thioesterase AMIR_RS22905 SM00825 Beta-ketoacyl synthase AMIR_RS22905 SM00826 AMIR_RS22905 AMIR_RS22905 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS22905 SM00829 Enoylreductase AMIR_RS22925 SM00354 helix_turn _helix lactose operon repressor AMIR_RS22950 SM01149 AMIR_RS22950 AMIR_RS22990 SM00458 Ricin-type beta-trefoil AMIR_RS23000 SM00422 helix_turn_helix, mercury resistance AMIR_RS23000 SM00871 Bacterial transcription activator, effector binding domain AMIR_RS23005 SM00422 helix_turn_helix, mercury resistance AMIR_RS23005 SM00567 E-Z type HEAT repeats AMIR_RS23040 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS23055 SM00560 LamG-like jellyroll fold domain AMIR_RS23055 SM00776 AMIR_RS23055 AMIR_RS23055 SM01038 Beta galactosidase small chain AMIR_RS23065 SM00421 helix_turn_helix, Lux Regulon AMIR_RS23070 SM00829 Enoylreductase AMIR_RS23075 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS23120 SM00829 Enoylreductase AMIR_RS23130 SM01209 AMIR_RS23130 AMIR_RS23160 SM00998 Adenylosuccinate lyase C-terminus AMIR_RS23285 SM00637 AMIR_RS23285 AMIR_RS23315 SM00387 Histidine kinase-like ATPases AMIR_RS23320 SM00421 helix_turn_helix, Lux Regulon AMIR_RS23320 SM00448 cheY-homologous receiver domain AMIR_RS23360 SM00822 AMIR_RS23360 AMIR_RS23360 SM00823 Phosphopantetheine attachment site AMIR_RS23360 SM00825 Beta-ketoacyl synthase AMIR_RS23360 SM00826 AMIR_RS23360 AMIR_RS23360 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS23360 SM01294 AMIR_RS23360 AMIR_RS23365 SM00822 AMIR_RS23365 AMIR_RS23365 SM00823 Phosphopantetheine attachment site AMIR_RS23365 SM00825 Beta-ketoacyl synthase AMIR_RS23365 SM00826 AMIR_RS23365 AMIR_RS23365 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS23365 SM01294 AMIR_RS23365 AMIR_RS23370 SM00903 Flavin reductase like domain AMIR_RS23435 SM01011 Aminopeptidase P, N-terminal domain AMIR_RS23445 SM00382 ATPases associated with a variety of cellular activities AMIR_RS23450 SM00382 ATPases associated with a variety of cellular activities AMIR_RS23470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS23470 SM00895 AMIR_RS23470 AMIR_RS23485 SM01130 AMIR_RS23485 AMIR_RS23510 SM01133 AMIR_RS23510 AMIR_RS23515 SM00354 helix_turn _helix lactose operon repressor AMIR_RS23520 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS23530 SM00633 Glycosyl hydrolase family 10 AMIR_RS23530 SM00637 AMIR_RS23530 AMIR_RS23585 SM00382 ATPases associated with a variety of cellular activities AMIR_RS23615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS23615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS23645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS23660 SM00631 AMIR_RS23660 AMIR_RS23665 SM00054 EF-hand, calcium binding motif AMIR_RS23710 SM00382 ATPases associated with a variety of cellular activities AMIR_RS23725 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMIR_RS23775 SM00382 ATPases associated with a variety of cellular activities AMIR_RS23800 SM00849 Metallo-beta-lactamase superfamily AMIR_RS23820 SM00822 AMIR_RS23820 AMIR_RS23855 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS23855 SM01043 Bacterial transcriptional activator domain AMIR_RS23930 SM00960 Roadblock/LC7 domain AMIR_RS23935 SM00387 Histidine kinase-like ATPases AMIR_RS24090 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS24090 SM01260 AMIR_RS24090 AMIR_RS24110 SM00822 AMIR_RS24110 AMIR_RS24135 SM00825 Beta-ketoacyl synthase AMIR_RS24160 SM00382 ATPases associated with a variety of cellular activities AMIR_RS24190 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIR_RS24195 SM00560 LamG-like jellyroll fold domain AMIR_RS24205 SM01217 AMIR_RS24205 AMIR_RS24235 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS24270 SM00382 ATPases associated with a variety of cellular activities AMIR_RS24280 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS24300 SM00612 AMIR_RS24300 AMIR_RS24325 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS24355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS24355 SM00895 AMIR_RS24355 AMIR_RS24360 SM00382 ATPases associated with a variety of cellular activities AMIR_RS24400 SM00823 Phosphopantetheine attachment site AMIR_RS24440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS24440 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS24485 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS24505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS24505 SM00387 Histidine kinase-like ATPases AMIR_RS24505 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS24510 SM00448 cheY-homologous receiver domain AMIR_RS24510 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS24655 SM00656 AMIR_RS24655 AMIR_RS24655 SM00710 Parallel beta-helix repeats AMIR_RS24660 SM00458 Ricin-type beta-trefoil AMIR_RS24670 SM00458 Ricin-type beta-trefoil AMIR_RS24705 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS24720 SM01091 Transporter associated domain AMIR_RS24745 SM00028 Tetratricopeptide repeats AMIR_RS24755 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS24795 SM00421 helix_turn_helix, Lux Regulon AMIR_RS24795 SM00448 cheY-homologous receiver domain AMIR_RS24825 SM00861 Transketolase, pyrimidine binding domain AMIR_RS24835 SM00344 helix_turn_helix ASNC type AMIR_RS24845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS24845 SM00387 Histidine kinase-like ATPases AMIR_RS24845 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS24850 SM00448 cheY-homologous receiver domain AMIR_RS24850 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS24875 SM00267 diguanylate cyclase AMIR_RS24885 SM00829 Enoylreductase AMIR_RS24895 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS24900 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS24915 SM00861 Transketolase, pyrimidine binding domain AMIR_RS24940 SM00829 Enoylreductase AMIR_RS24960 SM00563 Phosphate acyltransferases AMIR_RS24965 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS24965 SM00448 cheY-homologous receiver domain AMIR_RS24970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS24970 SM00387 Histidine kinase-like ATPases AMIR_RS24970 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS24975 SM00448 cheY-homologous receiver domain AMIR_RS25035 SM00822 AMIR_RS25035 AMIR_RS25060 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25095 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIR_RS25100 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS25100 SM00895 AMIR_RS25100 AMIR_RS25110 SM00923 MbtH-like protein AMIR_RS25115 SM00823 Phosphopantetheine attachment site AMIR_RS25140 SM00849 Metallo-beta-lactamase superfamily AMIR_RS25145 SM00644 AMIR_RS25145 AMIR_RS25145 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AMIR_RS25155 SM00633 Glycosyl hydrolase family 10 AMIR_RS25155 SM00637 AMIR_RS25155 AMIR_RS25190 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS25215 SM00882 Coenzyme A transferase AMIR_RS25220 SM00882 Coenzyme A transferase AMIR_RS25230 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25235 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS25240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS25240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS25240 SM00387 Histidine kinase-like ATPases AMIR_RS25240 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS25240 SM00448 cheY-homologous receiver domain AMIR_RS25285 SM00354 helix_turn _helix lactose operon repressor AMIR_RS25330 SM00642 Alpha-amylase domain AMIR_RS25335 SM00642 Alpha-amylase domain AMIR_RS25340 SM00642 Alpha-amylase domain AMIR_RS25355 SM00354 helix_turn _helix lactose operon repressor AMIR_RS25395 SM00421 helix_turn_helix, Lux Regulon AMIR_RS25410 SM00822 AMIR_RS25410 AMIR_RS25415 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS25415 SM01134 AMIR_RS25415 AMIR_RS25425 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25440 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIR_RS25510 SM00052 Putative diguanylate phosphodiesterase AMIR_RS25510 SM00267 diguanylate cyclase AMIR_RS25520 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS25540 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25595 SM00382 ATPases associated with a variety of cellular activities AMIR_RS25635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS25645 SM00960 Roadblock/LC7 domain AMIR_RS25650 SM00387 Histidine kinase-like ATPases AMIR_RS25680 SM00829 Enoylreductase AMIR_RS25720 SM00861 Transketolase, pyrimidine binding domain AMIR_RS25785 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIR_RS25815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIR_RS25815 SM00465 GIY-YIG type nucleases (URI domain) AMIR_RS25965 SM01409 AMIR_RS25965 AMIR_RS25970 SM00072 Guanylate kinase homologues. AMIR_RS25980 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMIR_RS25985 SM00851 MGS-like domain AMIR_RS25985 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIR_RS25990 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMIR_RS26015 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS26025 SM00841 Elongation factor P, C-terminal AMIR_RS26025 SM01185 AMIR_RS26025 AMIR_RS26075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS26075 SM00866 AMIR_RS26075 AMIR_RS26100 SM00732 Likely ribonuclease with RNase H fold. AMIR_RS26105 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMIR_RS26120 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMIR_RS26135 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26145 SM00487 DEAD-like helicases superfamily AMIR_RS26145 SM00490 helicase superfamily c-terminal domain AMIR_RS26150 SM00028 Tetratricopeptide repeats AMIR_RS26150 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26150 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS26150 SM01043 Bacterial transcriptional activator domain AMIR_RS26155 SM00257 Lysin motif AMIR_RS26165 SM00448 cheY-homologous receiver domain AMIR_RS26165 SM00850 LytTr DNA-binding domain AMIR_RS26180 SM00387 Histidine kinase-like ATPases AMIR_RS26260 SM00829 Enoylreductase AMIR_RS26265 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS26295 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26305 SM00829 Enoylreductase AMIR_RS26325 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIR_RS26325 SM01134 AMIR_RS26325 AMIR_RS26340 SM01260 AMIR_RS26340 AMIR_RS26350 SM00421 helix_turn_helix, Lux Regulon AMIR_RS26375 SM00458 Ricin-type beta-trefoil AMIR_RS26385 SM00028 Tetratricopeptide repeats AMIR_RS26385 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS26385 SM01043 Bacterial transcriptional activator domain AMIR_RS26400 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26440 SM00495 Chitin-binding domain type 3 AMIR_RS26460 SM00637 AMIR_RS26460 AMIR_RS26480 SM00354 helix_turn _helix lactose operon repressor AMIR_RS26485 SM01091 Transporter associated domain AMIR_RS26500 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS26515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS26530 SM00422 helix_turn_helix, mercury resistance AMIR_RS26540 SM00422 helix_turn_helix, mercury resistance AMIR_RS26545 SM00240 Forkhead associated domain AMIR_RS26635 SM00387 Histidine kinase-like ATPases AMIR_RS26640 SM00421 helix_turn_helix, Lux Regulon AMIR_RS26640 SM00448 cheY-homologous receiver domain AMIR_RS26645 SM00421 helix_turn_helix, Lux Regulon AMIR_RS26690 SM00257 Lysin motif AMIR_RS26725 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26735 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS26745 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26795 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS26800 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS26815 SM00028 Tetratricopeptide repeats AMIR_RS26835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS26835 SM00267 diguanylate cyclase AMIR_RS26845 SM00960 Roadblock/LC7 domain AMIR_RS26850 SM00387 Histidine kinase-like ATPases AMIR_RS26865 SM00382 ATPases associated with a variety of cellular activities AMIR_RS26885 SM00363 S4 RNA-binding domain AMIR_RS26910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS26965 SM00363 S4 RNA-binding domain AMIR_RS27005 SM00054 EF-hand, calcium binding motif AMIR_RS27050 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIR_RS27055 SM00829 Enoylreductase AMIR_RS27065 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS27085 SM00873 B3/4 domain AMIR_RS27085 SM00874 tRNA synthetase B5 domain AMIR_RS27085 SM00896 Ferredoxin-fold anticodon binding domain AMIR_RS27100 SM00028 Tetratricopeptide repeats AMIR_RS27105 SM00448 cheY-homologous receiver domain AMIR_RS27105 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS27110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS27110 SM00387 Histidine kinase-like ATPases AMIR_RS27110 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS27145 SM00382 ATPases associated with a variety of cellular activities AMIR_RS27145 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS27155 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS27165 SM01119 AMIR_RS27165 AMIR_RS27195 SM00849 Metallo-beta-lactamase superfamily AMIR_RS27220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS27230 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS27265 SM00020 Trypsin-like serine protease AMIR_RS27295 SM00953 AMIR_RS27295 AMIR_RS27310 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS27325 SM00382 ATPases associated with a variety of cellular activities AMIR_RS27325 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIR_RS27335 SM00487 DEAD-like helicases superfamily AMIR_RS27335 SM00490 helicase superfamily c-terminal domain AMIR_RS27365 SM00316 Ribosomal protein S1-like RNA-binding domain AMIR_RS27415 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMIR_RS27415 SM00474 3'-5' exonuclease AMIR_RS27415 SM00475 5'-3' exonuclease AMIR_RS27415 SM00482 DNA polymerase A domain AMIR_RS27430 SM00382 ATPases associated with a variety of cellular activities AMIR_RS27435 SM00382 ATPases associated with a variety of cellular activities AMIR_RS27455 SM00448 cheY-homologous receiver domain AMIR_RS27455 SM01012 AMIR_RS27455 AMIR_RS27475 SM00881 CoA binding domain AMIR_RS27500 SM00341 Helicase and RNase D C-terminal AMIR_RS27500 SM00487 DEAD-like helicases superfamily AMIR_RS27500 SM00490 helicase superfamily c-terminal domain AMIR_RS27500 SM00956 AMIR_RS27500 AMIR_RS27525 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS27770 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS27770 SM00866 AMIR_RS27770 AMIR_RS28105 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS28120 SM00354 helix_turn _helix lactose operon repressor AMIR_RS28130 SM00382 ATPases associated with a variety of cellular activities AMIR_RS28135 SM00382 ATPases associated with a variety of cellular activities AMIR_RS28135 SM00421 helix_turn_helix, Lux Regulon AMIR_RS28140 SM00028 Tetratricopeptide repeats AMIR_RS28140 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS28140 SM01043 Bacterial transcriptional activator domain AMIR_RS28155 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS28165 SM00947 Carbonic anhydrase AMIR_RS28170 SM01350 AMIR_RS28170 AMIR_RS28235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS28235 SM00387 Histidine kinase-like ATPases AMIR_RS28235 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS28245 SM00448 cheY-homologous receiver domain AMIR_RS28245 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS28330 SM00861 Transketolase, pyrimidine binding domain AMIR_RS28340 SM00422 helix_turn_helix, mercury resistance AMIR_RS28365 SM00631 AMIR_RS28365 AMIR_RS28410 SM00464 Found in ATP-dependent protease La (LON) AMIR_RS28435 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS28435 SM00876 Biotin and Thiamin Synthesis associated domain AMIR_RS28460 SM00481 DNA polymerase alpha chain like domain AMIR_RS28505 SM01152 AMIR_RS28505 AMIR_RS28545 SM00864 Tubulin/FtsZ family, GTPase domain AMIR_RS28545 SM00865 Tubulin/FtsZ family, C-terminal domain AMIR_RS28635 SM00460 Transglutaminase/protease-like homologues AMIR_RS28655 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS28655 SM00419 helix_turn_helix, cAMP Regulatory protein AMIR_RS28670 SM01230 AMIR_RS28670 AMIR_RS28690 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS28690 SM01232 AMIR_RS28690 AMIR_RS28725 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS28740 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS28750 SM00422 helix_turn_helix, mercury resistance AMIR_RS28760 SM00843 AMIR_RS28760 AMIR_RS28765 SM00563 Phosphate acyltransferases AMIR_RS28770 SM00849 Metallo-beta-lactamase superfamily AMIR_RS28775 SM01130 AMIR_RS28775 AMIR_RS28785 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS28855 SM00316 Ribosomal protein S1-like RNA-binding domain AMIR_RS28855 SM00322 K homology RNA-binding domain AMIR_RS28860 SM01387 AMIR_RS28860 AMIR_RS28875 SM00904 Riboflavin kinase AMIR_RS28915 SM00316 Ribosomal protein S1-like RNA-binding domain AMIR_RS28915 SM00322 K homology RNA-binding domain AMIR_RS28985 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS28990 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS28995 SM00090 RIO-like kinase AMIR_RS29000 SM00487 DEAD-like helicases superfamily AMIR_RS29000 SM00490 helicase superfamily c-terminal domain AMIR_RS29010 SM00020 Trypsin-like serine protease AMIR_RS29040 SM00327 von Willebrand factor (vWF) type A domain AMIR_RS29040 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29065 SM00020 Trypsin-like serine protease AMIR_RS29075 SM00020 Trypsin-like serine protease AMIR_RS29080 SM00020 Trypsin-like serine protease AMIR_RS29100 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29100 SM00464 Found in ATP-dependent protease La (LON) AMIR_RS29135 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS29135 SM00895 AMIR_RS29135 AMIR_RS29200 SM00421 helix_turn_helix, Lux Regulon AMIR_RS29200 SM00448 cheY-homologous receiver domain AMIR_RS29225 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29235 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS29245 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS29315 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29385 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29385 SM00962 SRP54-type protein, GTPase domain AMIR_RS29385 SM00963 SRP54-type protein, helical bundle domain AMIR_RS29395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIR_RS29400 SM00938 Nitrogen regulatory protein P-II AMIR_RS29450 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS29460 SM00382 ATPases associated with a variety of cellular activities AMIR_RS29460 SM00962 SRP54-type protein, GTPase domain AMIR_RS29460 SM00963 SRP54-type protein, helical bundle domain AMIR_RS29490 SM00563 Phosphate acyltransferases AMIR_RS29495 SM00968 SMC proteins Flexible Hinge Domain AMIR_RS29535 SM00448 cheY-homologous receiver domain AMIR_RS29535 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS29540 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS29545 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIR_RS29545 SM01232 AMIR_RS29545 AMIR_RS29555 SM00358 Double-stranded RNA binding motif AMIR_RS29555 SM00535 Ribonuclease III family AMIR_RS29600 SM00878 Biotin carboxylase C-terminal domain AMIR_RS29620 SM00487 DEAD-like helicases superfamily AMIR_RS29620 SM00490 helicase superfamily c-terminal domain AMIR_RS29625 SM01120 AMIR_RS29625 AMIR_RS29625 SM01121 AMIR_RS29625 AMIR_RS29640 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS29645 SM00986 Uracil DNA glycosylase superfamily AMIR_RS29645 SM00987 UreE urease accessory protein, C-terminal domain AMIR_RS29690 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS29725 SM00563 Phosphate acyltransferases AMIR_RS29745 SM00855 Phosphoglycerate mutase family AMIR_RS29750 SM00411 bacterial (prokaryotic) histone like domain AMIR_RS29765 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS29810 SM00917 LeuA allosteric (dimerisation) domain AMIR_RS29815 SM01329 AMIR_RS29815 AMIR_RS29855 SM00756 AMIR_RS29855 AMIR_RS29890 SM00028 Tetratricopeptide repeats AMIR_RS29900 SM00845 GatB domain AMIR_RS29930 SM00292 breast cancer carboxy-terminal domain AMIR_RS29930 SM00532 Ligase N family AMIR_RS29980 SM00563 Phosphate acyltransferases AMIR_RS29990 SM00893 Electron transfer flavoprotein domain AMIR_RS29995 SM00893 Electron transfer flavoprotein domain AMIR_RS30065 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30070 SM00642 Alpha-amylase domain AMIR_RS30080 SM00450 Rhodanese Homology Domain AMIR_RS30095 SM00642 Alpha-amylase domain AMIR_RS30100 SM00642 Alpha-amylase domain AMIR_RS30110 SM00642 Alpha-amylase domain AMIR_RS30145 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS30160 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30185 SM00354 helix_turn _helix lactose operon repressor AMIR_RS30195 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30225 SM00421 helix_turn_helix, Lux Regulon AMIR_RS30225 SM00448 cheY-homologous receiver domain AMIR_RS30230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS30230 SM00387 Histidine kinase-like ATPases AMIR_RS30285 SM00834 Putative regulatory protein AMIR_RS30300 SM01120 AMIR_RS30300 AMIR_RS30340 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS30415 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30490 SM00937 AMIR_RS30490 AMIR_RS30505 SM00357 Cold shock protein domain AMIR_RS30505 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30505 SM00959 Rho termination factor, N-terminal domain AMIR_RS30530 SM00836 DALR anticodon binding domain AMIR_RS30530 SM01016 Arginyl tRNA synthetase N terminal dom AMIR_RS30575 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30575 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS30575 SM01043 Bacterial transcriptional activator domain AMIR_RS30585 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS30610 SM00871 Bacterial transcription activator, effector binding domain AMIR_RS30620 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30660 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30665 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30715 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS30730 SM00829 Enoylreductase AMIR_RS30740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS30745 SM00331 Sigma factor PP2C-like phosphatases AMIR_RS30745 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIR_RS30760 SM00636 AMIR_RS30760 AMIR_RS30760 SM00637 AMIR_RS30760 AMIR_RS30765 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30770 SM00448 cheY-homologous receiver domain AMIR_RS30770 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS30775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS30775 SM00387 Histidine kinase-like ATPases AMIR_RS30775 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS30815 SM00903 Flavin reductase like domain AMIR_RS30835 SM00028 Tetratricopeptide repeats AMIR_RS30835 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30835 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS30835 SM01043 Bacterial transcriptional activator domain AMIR_RS30850 SM00052 Putative diguanylate phosphodiesterase AMIR_RS30850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS30850 SM00091 PAS domain AMIR_RS30850 SM00267 diguanylate cyclase AMIR_RS30880 SM00878 Biotin carboxylase C-terminal domain AMIR_RS30905 SM00421 helix_turn_helix, Lux Regulon AMIR_RS30905 SM00448 cheY-homologous receiver domain AMIR_RS30910 SM00387 Histidine kinase-like ATPases AMIR_RS30920 SM00060 Fibronectin type 3 domain AMIR_RS30920 SM00637 AMIR_RS30920 AMIR_RS30970 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIR_RS30970 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIR_RS30980 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30990 SM00382 ATPases associated with a variety of cellular activities AMIR_RS30995 SM00861 Transketolase, pyrimidine binding domain AMIR_RS31015 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS31065 SM00346 helix_turn_helix isocitrate lyase regulation AMIR_RS31085 SM00382 ATPases associated with a variety of cellular activities AMIR_RS31120 SM00052 Putative diguanylate phosphodiesterase AMIR_RS31120 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS31120 SM00091 PAS domain AMIR_RS31120 SM00267 diguanylate cyclase AMIR_RS31125 SM00919 Malic enzyme, NAD binding domain AMIR_RS31125 SM01274 AMIR_RS31125 AMIR_RS31150 SM00855 Phosphoglycerate mutase family AMIR_RS31165 SM00020 Trypsin-like serine protease AMIR_RS31175 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIR_RS31185 SM00387 Histidine kinase-like ATPases AMIR_RS31245 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS31260 SM00957 SecA DEAD-like domain AMIR_RS31260 SM00958 SecA preprotein cross-linking domain AMIR_RS31275 SM00909 Sporulation and spore germination AMIR_RS31280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS31280 SM00387 Histidine kinase-like ATPases AMIR_RS31280 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS31285 SM00448 cheY-homologous receiver domain AMIR_RS31285 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS31335 SM00996 S-adenosyl-L-homocysteine hydrolase AMIR_RS31335 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIR_RS31490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIR_RS31500 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS31510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS31550 SM01001 AIR carboxylase AMIR_RS31565 SM00382 ATPases associated with a variety of cellular activities AMIR_RS31570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS31615 SM00448 cheY-homologous receiver domain AMIR_RS31615 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS31620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIR_RS31620 SM00387 Histidine kinase-like ATPases AMIR_RS31620 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS31700 SM00878 Biotin carboxylase C-terminal domain AMIR_RS31750 SM00421 helix_turn_helix, Lux Regulon AMIR_RS31750 SM00448 cheY-homologous receiver domain AMIR_RS31760 SM00382 ATPases associated with a variety of cellular activities AMIR_RS31825 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS31850 SM00422 helix_turn_helix, mercury resistance AMIR_RS31880 SM00320 WD40 repeats AMIR_RS31895 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS31965 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMIR_RS31985 SM00382 ATPases associated with a variety of cellular activities AMIR_RS32080 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIR_RS32110 SM01329 AMIR_RS32110 AMIR_RS32130 SM00271 DnaJ molecular chaperone homology domain AMIR_RS32135 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS32155 SM00382 ATPases associated with a variety of cellular activities AMIR_RS32225 SM00798 AICARFT/IMPCHase bienzyme AMIR_RS32225 SM00851 MGS-like domain AMIR_RS32245 SM00881 CoA binding domain AMIR_RS32275 SM00830 Chorismate mutase type II AMIR_RS32305 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS32310 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS32330 SM00421 helix_turn_helix, Lux Regulon AMIR_RS32330 SM00448 cheY-homologous receiver domain AMIR_RS32375 SM01240 AMIR_RS32375 AMIR_RS32380 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIR_RS32380 SM01240 AMIR_RS32380 AMIR_RS32400 SM00421 helix_turn_helix, Lux Regulon AMIR_RS32400 SM00448 cheY-homologous receiver domain AMIR_RS32410 SM00422 helix_turn_helix, mercury resistance AMIR_RS32425 SM00883 Chaperonin 10 Kd subunit AMIR_RS32450 SM00422 helix_turn_helix, mercury resistance AMIR_RS32480 SM01005 Alanine racemase, C-terminal domain AMIR_RS32610 SM00662 RNA polymerases D AMIR_RS32615 SM00363 S4 RNA-binding domain AMIR_RS32615 SM01390 AMIR_RS32615 AMIR_RS32705 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMIR_RS32710 SM01374 AMIR_RS32710 AMIR_RS32730 SM00322 K homology RNA-binding domain AMIR_RS32745 SM01382 AMIR_RS32745 AMIR_RS32745 SM01383 AMIR_RS32745 AMIR_RS32765 SM01403 AMIR_RS32765 AMIR_RS32775 SM00838 Elongation factor G C-terminus AMIR_RS32775 SM00889 Elongation factor G, domain IV AMIR_RS32815 SM00663 RNA polymerase I subunit A N-terminus AMIR_RS32860 SM00382 ATPases associated with a variety of cellular activities AMIR_RS32885 SM00649 Ribosomal protein L11/L12 AMIR_RS32890 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMIR_RS32890 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMIR_RS32940 SM00052 Putative diguanylate phosphodiesterase AMIR_RS32940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIR_RS32940 SM00267 diguanylate cyclase AMIR_RS33005 SM00344 helix_turn_helix ASNC type AMIR_RS33075 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIR_RS33075 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMIR_RS33080 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIR_RS33215 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS33230 SM00344 helix_turn_helix ASNC type AMIR_RS33270 SM00829 Enoylreductase AMIR_RS33280 SM00855 Phosphoglycerate mutase family AMIR_RS33325 SM01004 Delta-aminolevulinic acid dehydratase AMIR_RS33345 SM00881 CoA binding domain AMIR_RS33350 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMIR_RS33385 SM00563 Phosphate acyltransferases AMIR_RS33435 SM00448 cheY-homologous receiver domain AMIR_RS33435 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS33440 SM00387 Histidine kinase-like ATPases AMIR_RS33440 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS33455 SM00855 Phosphoglycerate mutase family AMIR_RS33535 SM00422 helix_turn_helix, mercury resistance AMIR_RS33560 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS33600 SM00382 ATPases associated with a variety of cellular activities AMIR_RS33630 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS33695 SM00357 Cold shock protein domain AMIR_RS33700 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS33735 SM00829 Enoylreductase AMIR_RS33765 SM00267 diguanylate cyclase AMIR_RS33795 SM00382 ATPases associated with a variety of cellular activities AMIR_RS33820 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS33845 SM00450 Rhodanese Homology Domain AMIR_RS33860 SM00796 Allophanate hydrolase subunit 1 AMIR_RS33865 SM00797 Allophanate hydrolase subunit 2 AMIR_RS33910 SM00100 Cyclic nucleotide-monophosphate binding domain AMIR_RS33935 SM00382 ATPases associated with a variety of cellular activities AMIR_RS33960 SM00354 helix_turn _helix lactose operon repressor AMIR_RS34045 SM00052 Putative diguanylate phosphodiesterase AMIR_RS34045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIR_RS34045 SM00091 PAS domain AMIR_RS34045 SM00267 diguanylate cyclase AMIR_RS34065 SM00641 Glycosyl hydrolases family 25 AMIR_RS34070 SM00641 Glycosyl hydrolases family 25 AMIR_RS34080 SM01211 AMIR_RS34080 AMIR_RS34100 SM00849 Metallo-beta-lactamase superfamily AMIR_RS34115 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS34115 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIR_RS34125 SM00382 ATPases associated with a variety of cellular activities AMIR_RS34135 SM00998 Adenylosuccinate lyase C-terminus AMIR_RS34210 SM01209 AMIR_RS34210 AMIR_RS34210 SM01210 AMIR_RS34210 AMIR_RS34235 SM00788 Adenylosuccinate synthetase AMIR_RS34285 SM00822 AMIR_RS34285 AMIR_RS34340 SM00354 helix_turn _helix lactose operon repressor AMIR_RS34350 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMIR_RS34390 SM00822 AMIR_RS34390 AMIR_RS34400 SM00382 ATPases associated with a variety of cellular activities AMIR_RS34400 SM01086 C-terminal, D2-small domain, of ClpB protein AMIR_RS34415 SM00422 helix_turn_helix, mercury resistance AMIR_RS34420 SM00271 DnaJ molecular chaperone homology domain AMIR_RS34500 SM00421 helix_turn_helix, Lux Regulon AMIR_RS34520 SM00883 Chaperonin 10 Kd subunit AMIR_RS34550 SM00822 AMIR_RS34550 AMIR_RS34585 SM00422 helix_turn_helix, mercury resistance AMIR_RS34595 SM00861 Transketolase, pyrimidine binding domain AMIR_RS34615 SM00062 Bacterial periplasmic substrate-binding proteins AMIR_RS34615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIR_RS34625 SM00382 ATPases associated with a variety of cellular activities AMIR_RS34670 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS34670 SM00895 AMIR_RS34670 AMIR_RS34695 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS34725 SM00387 Histidine kinase-like ATPases AMIR_RS34730 SM00421 helix_turn_helix, Lux Regulon AMIR_RS34730 SM00448 cheY-homologous receiver domain AMIR_RS34760 SM00387 Histidine kinase-like ATPases AMIR_RS34785 SM00382 ATPases associated with a variety of cellular activities AMIR_RS34805 SM00822 AMIR_RS34805 AMIR_RS34865 SM00518 AP endonuclease family 2 AMIR_RS34910 SM00822 AMIR_RS34910 AMIR_RS34915 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS34925 SM00267 diguanylate cyclase AMIR_RS34950 SM00267 diguanylate cyclase AMIR_RS34960 SM00421 helix_turn_helix, Lux Regulon AMIR_RS34960 SM00448 cheY-homologous receiver domain AMIR_RS34995 SM00829 Enoylreductase AMIR_RS35070 SM00421 helix_turn_helix, Lux Regulon AMIR_RS35075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIR_RS35120 SM00646 AMIR_RS35120 AMIR_RS35140 SM00470 ParB-like nuclease domain AMIR_RS35160 SM00393 Putative single-stranded nucleic acids-binding domain AMIR_RS35170 SM01234 AMIR_RS35170 AMIR_RS35230 SM00318 Staphylococcal nuclease homologues AMIR_RS35310 SM00028 Tetratricopeptide repeats AMIR_RS35310 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS35315 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS35325 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIR_RS35340 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS35395 SM00014 Acid phosphatase homologues AMIR_RS35445 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS35515 SM00028 Tetratricopeptide repeats AMIR_RS35525 SM00052 Putative diguanylate phosphodiesterase AMIR_RS35525 SM00267 diguanylate cyclase AMIR_RS35535 SM00387 Histidine kinase-like ATPases AMIR_RS35535 SM00388 His Kinase A (phosphoacceptor) domain AMIR_RS35545 SM00091 PAS domain AMIR_RS35545 SM00387 Histidine kinase-like ATPases AMIR_RS35550 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMIR_RS35555 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIR_RS35590 SM00052 Putative diguanylate phosphodiesterase AMIR_RS35590 SM00267 diguanylate cyclase AMIR_RS35595 SM00458 Ricin-type beta-trefoil AMIR_RS35635 SM00822 AMIR_RS35635 AMIR_RS35635 SM00823 Phosphopantetheine attachment site AMIR_RS35635 SM00824 Thioesterase AMIR_RS35635 SM00825 Beta-ketoacyl synthase AMIR_RS35635 SM00826 AMIR_RS35635 AMIR_RS35635 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS35635 SM01294 AMIR_RS35635 AMIR_RS35645 SM00560 LamG-like jellyroll fold domain AMIR_RS35645 SM00758 AMIR_RS35645 AMIR_RS35670 SM00421 helix_turn_helix, Lux Regulon AMIR_RS35685 SM00422 helix_turn_helix, mercury resistance AMIR_RS35725 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS35725 SM01043 Bacterial transcriptional activator domain AMIR_RS35740 SM00479 AMIR_RS35740 AMIR_RS35755 SM00255 Toll - interleukin 1 - resistance AMIR_RS35780 SM00421 helix_turn_helix, Lux Regulon AMIR_RS35785 SM00257 Lysin motif AMIR_RS35785 SM00641 Glycosyl hydrolases family 25 AMIR_RS35815 SM00342 helix_turn_helix, arabinose operon control protein AMIR_RS35850 SM00421 helix_turn_helix, Lux Regulon AMIR_RS35855 SM00641 Glycosyl hydrolases family 25 AMIR_RS35870 SM00382 ATPases associated with a variety of cellular activities AMIR_RS35900 SM00823 Phosphopantetheine attachment site AMIR_RS35940 SM00020 Trypsin-like serine protease AMIR_RS35955 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS35980 SM00028 Tetratricopeptide repeats AMIR_RS35980 SM00382 ATPases associated with a variety of cellular activities AMIR_RS36005 SM00421 helix_turn_helix, Lux Regulon AMIR_RS36025 SM00560 LamG-like jellyroll fold domain AMIR_RS36030 SM00421 helix_turn_helix, Lux Regulon AMIR_RS36100 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS36120 SM00862 Transcriptional regulatory protein, C terminal AMIR_RS36120 SM01043 Bacterial transcriptional activator domain AMIR_RS36140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIR_RS36150 SM00458 Ricin-type beta-trefoil AMIR_RS36155 SM00822 AMIR_RS36155 AMIR_RS36155 SM00823 Phosphopantetheine attachment site AMIR_RS36155 SM00825 Beta-ketoacyl synthase AMIR_RS36155 SM00826 AMIR_RS36155 AMIR_RS36155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS36155 SM01294 AMIR_RS36155 AMIR_RS36175 SM00382 ATPases associated with a variety of cellular activities AMIR_RS36180 SM00220 Serine/Threonine protein kinases, catalytic domain AMIR_RS36185 SM00421 helix_turn_helix, Lux Regulon AMIR_RS36190 SM00822 AMIR_RS36190 AMIR_RS36190 SM00823 Phosphopantetheine attachment site AMIR_RS36190 SM00825 Beta-ketoacyl synthase AMIR_RS36190 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIR_RS36200 SM00382 ATPases associated with a variety of cellular activities AMIR_RS36210 SM01012 AMIR_RS36210 AMIR_RS36285 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS36340 SM00641 Glycosyl hydrolases family 25 AMIR_RS36520 SM00530 Helix-turn-helix XRE-family like proteins AMIR_RS36575 SM00479 AMIR_RS36575