AEQU_RS00005 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AEQU_RS00015 SM00393 Putative single-stranded nucleic acids-binding domain AEQU_RS00035 SM00470 ParB-like nuclease domain AEQU_RS00055 SM00479 AEQU_RS00055 AEQU_RS00055 SM00491 AEQU_RS00055 AEQU_RS00095 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00115 SM00788 Adenylosuccinate synthetase AEQU_RS00120 SM01209 AEQU_RS00120 AEQU_RS00120 SM01210 AEQU_RS00120 AEQU_RS00125 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS00145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AEQU_RS00145 SM00267 diguanylate cyclase AEQU_RS00180 SM00014 Acid phosphatase homologues AEQU_RS00185 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00215 SM00470 ParB-like nuclease domain AEQU_RS00230 SM00487 DEAD-like helicases superfamily AEQU_RS00330 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00335 SM00824 Thioesterase AEQU_RS00360 SM00823 Phosphopantetheine attachment site AEQU_RS00375 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00380 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00385 SM00529 Helix-turn-helix diphteria tox regulatory element AEQU_RS00400 SM00996 S-adenosyl-L-homocysteine hydrolase AEQU_RS00400 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AEQU_RS00535 SM00271 DnaJ molecular chaperone homology domain AEQU_RS00540 SM00422 helix_turn_helix, mercury resistance AEQU_RS00545 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00545 SM01086 C-terminal, D2-small domain, of ClpB protein AEQU_RS00570 SM00448 cheY-homologous receiver domain AEQU_RS00570 SM00850 LytTr DNA-binding domain AEQU_RS00630 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00635 SM00387 Histidine kinase-like ATPases AEQU_RS00640 SM00448 cheY-homologous receiver domain AEQU_RS00640 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS00665 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS00665 SM01091 Transporter associated domain AEQU_RS00710 SM00062 Bacterial periplasmic substrate-binding proteins AEQU_RS00720 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AEQU_RS00730 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS00740 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00800 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00810 SM00967 RNA 2'-O ribose methyltransferase substrate binding AEQU_RS00820 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00830 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AEQU_RS00850 SM00421 helix_turn_helix, Lux Regulon AEQU_RS00860 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS00875 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00890 SM00506 Appr-1"-p processing enzyme AEQU_RS00910 SM00448 cheY-homologous receiver domain AEQU_RS00910 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS00915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AEQU_RS00915 SM00387 Histidine kinase-like ATPases AEQU_RS00915 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS00935 SM00382 ATPases associated with a variety of cellular activities AEQU_RS00955 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS00960 SM00421 helix_turn_helix, Lux Regulon AEQU_RS00965 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS00990 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01025 SM01018 B12 binding domain AEQU_RS01060 SM00838 Elongation factor G C-terminus AEQU_RS01060 SM00889 Elongation factor G, domain IV AEQU_RS01070 SM00663 RNA polymerase I subunit A N-terminus AEQU_RS01105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS01165 SM00873 B3/4 domain AEQU_RS01180 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS01220 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS01280 SM00798 AICARFT/IMPCHase bienzyme AEQU_RS01320 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01325 SM00327 von Willebrand factor (vWF) type A domain AEQU_RS01355 SM00382 ATPases associated with a variety of cellular activities AEQU_RS01355 SM01086 C-terminal, D2-small domain, of ClpB protein AEQU_RS01370 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS01385 SM00954 Region found in RelA / SpoT proteins AEQU_RS01390 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS01395 SM00840 AEQU_RS01395 AEQU_RS01405 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01430 SM00859 Semialdehyde dehydrogenase, NAD binding domain AEQU_RS01535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS01625 SM00382 ATPases associated with a variety of cellular activities AEQU_RS01635 SM00493 AEQU_RS01635 AEQU_RS01645 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01680 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AEQU_RS01730 SM00271 DnaJ molecular chaperone homology domain AEQU_RS01785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS01790 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01795 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS01805 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS01835 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01865 SM00387 Histidine kinase-like ATPases AEQU_RS01970 SM00421 helix_turn_helix, Lux Regulon AEQU_RS01990 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AEQU_RS02000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS02075 SM00091 PAS domain AEQU_RS02075 SM00387 Histidine kinase-like ATPases AEQU_RS02075 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS02075 SM00448 cheY-homologous receiver domain AEQU_RS02100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS02115 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS02120 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02130 SM00226 Low molecular weight phosphatase family AEQU_RS02145 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS02230 SM00854 Bacterial capsule synthesis protein PGA_cap AEQU_RS02245 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AEQU_RS02250 SM00822 AEQU_RS02250 AEQU_RS02255 SM00825 Beta-ketoacyl synthase AEQU_RS02280 SM00448 cheY-homologous receiver domain AEQU_RS02280 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS02295 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02330 SM00421 helix_turn_helix, Lux Regulon AEQU_RS02345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS02350 SM00244 prohibitin homologues AEQU_RS02355 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS02420 SM00830 Chorismate mutase type II AEQU_RS02445 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02450 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02480 SM00850 LytTr DNA-binding domain AEQU_RS02495 SM00422 helix_turn_helix, mercury resistance AEQU_RS02510 SM00487 DEAD-like helicases superfamily AEQU_RS02510 SM00490 helicase superfamily c-terminal domain AEQU_RS02515 SM00421 helix_turn_helix, Lux Regulon AEQU_RS02575 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS02580 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS02595 SM00220 Serine/Threonine protein kinases, catalytic domain AEQU_RS02600 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02620 SM00947 Carbonic anhydrase AEQU_RS02635 SM00244 prohibitin homologues AEQU_RS02640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS02645 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS02745 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS02760 SM00650 Ribosomal RNA adenine dimethylases AEQU_RS02775 SM00341 Helicase and RNase D C-terminal AEQU_RS02775 SM00487 DEAD-like helicases superfamily AEQU_RS02775 SM00490 helicase superfamily c-terminal domain AEQU_RS02775 SM00956 AEQU_RS02775 AEQU_RS02780 SM01329 AEQU_RS02780 AEQU_RS02805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS02815 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS02850 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02885 SM00900 AEQU_RS02885 AEQU_RS02900 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS02915 SM00382 ATPases associated with a variety of cellular activities AEQU_RS02930 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AEQU_RS02955 SM00487 DEAD-like helicases superfamily AEQU_RS02980 SM00732 Likely ribonuclease with RNase H fold. AEQU_RS03055 SM00421 helix_turn_helix, Lux Regulon AEQU_RS03060 SM00841 Elongation factor P, C-terminal AEQU_RS03060 SM01185 AEQU_RS03060 AEQU_RS03070 SM00421 helix_turn_helix, Lux Regulon AEQU_RS03095 SM00878 Biotin carboxylase C-terminal domain AEQU_RS03115 SM00861 Transketolase, pyrimidine binding domain AEQU_RS03130 SM00938 Nitrogen regulatory protein P-II AEQU_RS03155 SM00316 Ribosomal protein S1-like RNA-binding domain AEQU_RS03190 SM00487 DEAD-like helicases superfamily AEQU_RS03190 SM00490 helicase superfamily c-terminal domain AEQU_RS03225 SM00873 B3/4 domain AEQU_RS03225 SM00874 tRNA synthetase B5 domain AEQU_RS03225 SM00896 Ferredoxin-fold anticodon binding domain AEQU_RS03240 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS03260 SM00292 breast cancer carboxy-terminal domain AEQU_RS03260 SM00532 Ligase N family AEQU_RS03300 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03550 SM00903 Flavin reductase like domain AEQU_RS03585 SM00421 helix_turn_helix, Lux Regulon AEQU_RS03600 SM00421 helix_turn_helix, Lux Regulon AEQU_RS03615 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS03630 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03640 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03645 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03695 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03760 SM00382 ATPases associated with a variety of cellular activities AEQU_RS03790 SM00481 DNA polymerase alpha chain like domain AEQU_RS03845 SM00845 GatB domain AEQU_RS03885 SM00448 cheY-homologous receiver domain AEQU_RS03885 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS03890 SM00387 Histidine kinase-like ATPases AEQU_RS03890 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS03940 SM00917 LeuA allosteric (dimerisation) domain AEQU_RS03970 SM00836 DALR anticodon binding domain AEQU_RS03970 SM01016 Arginyl tRNA synthetase N terminal dom AEQU_RS04055 SM00382 ATPases associated with a variety of cellular activities AEQU_RS04070 SM00421 helix_turn_helix, Lux Regulon AEQU_RS04075 SM00900 AEQU_RS04075 AEQU_RS04095 SM00363 S4 RNA-binding domain AEQU_RS04120 SM00387 Histidine kinase-like ATPases AEQU_RS04120 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS04120 SM00448 cheY-homologous receiver domain AEQU_RS04145 SM00563 Phosphate acyltransferases AEQU_RS04160 SM00382 ATPases associated with a variety of cellular activities AEQU_RS04165 SM01207 AEQU_RS04165 AEQU_RS04175 SM00387 Histidine kinase-like ATPases AEQU_RS04175 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS04175 SM00448 cheY-homologous receiver domain AEQU_RS04225 SM01120 AEQU_RS04225 AEQU_RS04225 SM01121 AEQU_RS04225 AEQU_RS04230 SM00487 DEAD-like helicases superfamily AEQU_RS04230 SM00490 helicase superfamily c-terminal domain AEQU_RS04265 SM00358 Double-stranded RNA binding motif AEQU_RS04265 SM00535 Ribonuclease III family AEQU_RS04270 SM00968 SMC proteins Flexible Hinge Domain AEQU_RS04320 SM00996 S-adenosyl-L-homocysteine hydrolase AEQU_RS04320 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AEQU_RS04335 SM00062 Bacterial periplasmic substrate-binding proteins AEQU_RS04345 SM00382 ATPases associated with a variety of cellular activities AEQU_RS04350 SM01264 AEQU_RS04350 AEQU_RS04395 SM00487 DEAD-like helicases superfamily AEQU_RS04395 SM00490 helicase superfamily c-terminal domain AEQU_RS04420 SM00046 Diacylglycerol kinase catalytic domain (presumed) AEQU_RS04440 SM00028 Tetratricopeptide repeats AEQU_RS04445 SM00562 AEQU_RS04445 AEQU_RS04500 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS04530 SM00100 Cyclic nucleotide-monophosphate binding domain AEQU_RS04530 SM00419 helix_turn_helix, cAMP Regulatory protein AEQU_RS04550 SM00244 prohibitin homologues AEQU_RS04570 SM00382 ATPases associated with a variety of cellular activities AEQU_RS04605 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AEQU_RS04645 SM00910 AEQU_RS04645 AEQU_RS04695 SM00900 AEQU_RS04695 AEQU_RS04700 SM00421 helix_turn_helix, Lux Regulon AEQU_RS04720 SM00917 LeuA allosteric (dimerisation) domain AEQU_RS04725 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS04765 SM00893 Electron transfer flavoprotein domain AEQU_RS04770 SM00893 Electron transfer flavoprotein domain AEQU_RS04785 SM00849 Metallo-beta-lactamase superfamily AEQU_RS04815 SM00900 AEQU_RS04815 AEQU_RS04820 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS04850 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS04855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS04890 SM00322 K homology RNA-binding domain AEQU_RS04920 SM00904 Riboflavin kinase AEQU_RS04930 SM00465 GIY-YIG type nucleases (URI domain) AEQU_RS04950 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AEQU_RS05040 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS05060 SM00046 Diacylglycerol kinase catalytic domain (presumed) AEQU_RS05065 SM00341 Helicase and RNase D C-terminal AEQU_RS05065 SM00474 3'-5' exonuclease AEQU_RS05090 SM00900 AEQU_RS05090 AEQU_RS05095 SM00421 helix_turn_helix, Lux Regulon AEQU_RS05140 SM00363 S4 RNA-binding domain AEQU_RS05150 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS05175 SM00421 helix_turn_helix, Lux Regulon AEQU_RS05180 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS05190 SM00421 helix_turn_helix, Lux Regulon AEQU_RS05245 SM01208 AEQU_RS05245 AEQU_RS05265 SM00240 Forkhead associated domain AEQU_RS05380 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS05395 SM00322 K homology RNA-binding domain AEQU_RS05395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AEQU_RS05405 SM00382 ATPases associated with a variety of cellular activities AEQU_RS05415 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS05430 SM00843 AEQU_RS05430 AEQU_RS05435 SM00849 Metallo-beta-lactamase superfamily AEQU_RS05440 SM01130 AEQU_RS05440 AEQU_RS05450 SM00316 Ribosomal protein S1-like RNA-binding domain AEQU_RS05450 SM00322 K homology RNA-binding domain AEQU_RS05455 SM01387 AEQU_RS05455 AEQU_RS05490 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS05500 SM00271 DnaJ molecular chaperone homology domain AEQU_RS05510 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS05530 SM00838 Elongation factor G C-terminus AEQU_RS05540 SM00849 Metallo-beta-lactamase superfamily AEQU_RS05550 SM00849 Metallo-beta-lactamase superfamily AEQU_RS05555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AEQU_RS05560 SM00981 AEQU_RS05560 AEQU_RS05565 SM01409 AEQU_RS05565 AEQU_RS05570 SM00072 Guanylate kinase homologues. AEQU_RS05580 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AEQU_RS05595 SM00851 MGS-like domain AEQU_RS05595 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AEQU_RS05600 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AEQU_RS05605 SM00382 ATPases associated with a variety of cellular activities AEQU_RS05690 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS05710 SM00400 zinc finger AEQU_RS05710 SM00493 AEQU_RS05710 AEQU_RS05725 SM00421 helix_turn_helix, Lux Regulon AEQU_RS05775 SM00937 AEQU_RS05775 AEQU_RS05800 SM00421 helix_turn_helix, Lux Regulon AEQU_RS05830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AEQU_RS05850 SM00382 ATPases associated with a variety of cellular activities AEQU_RS05850 SM00994 ClpX C4-type zinc finger AEQU_RS05850 SM01086 C-terminal, D2-small domain, of ClpB protein AEQU_RS05905 SM00646 AEQU_RS05905 AEQU_RS06080 SM00487 DEAD-like helicases superfamily AEQU_RS06095 SM00480 DNA polymerase III beta subunit AEQU_RS06175 SM00981 AEQU_RS06175 AEQU_RS06185 SM00448 cheY-homologous receiver domain AEQU_RS06185 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS06190 SM00387 Histidine kinase-like ATPases AEQU_RS06190 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS06200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS06210 SM00421 helix_turn_helix, Lux Regulon AEQU_RS06220 SM00487 DEAD-like helicases superfamily AEQU_RS06220 SM00490 helicase superfamily c-terminal domain AEQU_RS06285 SM00487 DEAD-like helicases superfamily AEQU_RS06285 SM00490 helicase superfamily c-terminal domain AEQU_RS06285 SM00982 AEQU_RS06285 AEQU_RS06285 SM01058 CarD-like/TRCF domain AEQU_RS06290 SM00478 endonuclease III AEQU_RS06345 SM00478 endonuclease III AEQU_RS06360 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06365 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06455 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06460 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06480 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06480 SM00962 SRP54-type protein, GTPase domain AEQU_RS06480 SM00963 SRP54-type protein, helical bundle domain AEQU_RS06485 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06485 SM00962 SRP54-type protein, GTPase domain AEQU_RS06485 SM00963 SRP54-type protein, helical bundle domain AEQU_RS06505 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS06510 SM00244 prohibitin homologues AEQU_RS06515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS06525 SM00955 AEQU_RS06525 AEQU_RS06530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AEQU_RS06530 SM00245 tail specific protease AEQU_RS06540 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06545 SM00861 Transketolase, pyrimidine binding domain AEQU_RS06580 SM00937 AEQU_RS06580 AEQU_RS06585 SM00957 SecA DEAD-like domain AEQU_RS06585 SM00958 SecA preprotein cross-linking domain AEQU_RS06605 SM01043 Bacterial transcriptional activator domain AEQU_RS06615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AEQU_RS06630 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AEQU_RS06660 SM00421 helix_turn_helix, Lux Regulon AEQU_RS06665 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AEQU_RS06665 SM00475 5'-3' exonuclease AEQU_RS06665 SM00482 DNA polymerase A domain AEQU_RS06670 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS06675 SM01230 AEQU_RS06675 AEQU_RS06745 SM00357 Cold shock protein domain AEQU_RS06745 SM00382 ATPases associated with a variety of cellular activities AEQU_RS06745 SM00959 Rho termination factor, N-terminal domain AEQU_RS06780 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS06830 SM01001 AIR carboxylase AEQU_RS06835 SM00422 helix_turn_helix, mercury resistance AEQU_RS06940 SM00919 Malic enzyme, NAD binding domain AEQU_RS06940 SM01274 AEQU_RS06940 AEQU_RS06955 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AEQU_RS06955 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AEQU_RS06955 SM00493 AEQU_RS06955 AEQU_RS06980 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS06985 SM00422 helix_turn_helix, mercury resistance AEQU_RS07000 SM00062 Bacterial periplasmic substrate-binding proteins AEQU_RS07005 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07025 SM00357 Cold shock protein domain AEQU_RS07035 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AEQU_RS07060 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07075 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS07080 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS07110 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07205 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AEQU_RS07235 SM00864 Tubulin/FtsZ family, GTPase domain AEQU_RS07235 SM00865 Tubulin/FtsZ family, C-terminal domain AEQU_RS07310 SM00870 AEQU_RS07310 AEQU_RS07325 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07365 SM00649 Ribosomal protein L11/L12 AEQU_RS07370 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AEQU_RS07415 SM00849 Metallo-beta-lactamase superfamily AEQU_RS07460 SM00890 Domain of unknown function AEQU_RS07525 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AEQU_RS07530 SM01374 AEQU_RS07530 AEQU_RS07550 SM00322 K homology RNA-binding domain AEQU_RS07565 SM01382 AEQU_RS07565 AEQU_RS07565 SM01383 AEQU_RS07565 AEQU_RS07580 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS07585 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS07600 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07605 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07625 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07655 SM01403 AEQU_RS07655 AEQU_RS07660 SM00838 Elongation factor G C-terminus AEQU_RS07660 SM00889 Elongation factor G, domain IV AEQU_RS07675 SM00421 helix_turn_helix, Lux Regulon AEQU_RS07705 SM01131 AEQU_RS07705 AEQU_RS07720 SM00062 Bacterial periplasmic substrate-binding proteins AEQU_RS07740 SM00363 S4 RNA-binding domain AEQU_RS07755 SM00859 Semialdehyde dehydrogenase, NAD binding domain AEQU_RS07785 SM00849 Metallo-beta-lactamase superfamily AEQU_RS07790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AEQU_RS07790 SM00954 Region found in RelA / SpoT proteins AEQU_RS07795 SM00487 DEAD-like helicases superfamily AEQU_RS07795 SM00490 helicase superfamily c-terminal domain AEQU_RS07825 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07840 SM01400 AEQU_RS07840 AEQU_RS07890 SM00986 Uracil DNA glycosylase superfamily AEQU_RS07890 SM00987 UreE urease accessory protein, C-terminal domain AEQU_RS07895 SM01005 Alanine racemase, C-terminal domain AEQU_RS07900 SM00852 Probable molybdopterin binding domain AEQU_RS07905 SM00852 Probable molybdopterin binding domain AEQU_RS07910 SM00382 ATPases associated with a variety of cellular activities AEQU_RS07930 SM01192 AEQU_RS07930 AEQU_RS07930 SM01193 AEQU_RS07930 AEQU_RS07960 SM00662 RNA polymerases D AEQU_RS07965 SM00363 S4 RNA-binding domain AEQU_RS07965 SM01390 AEQU_RS07965 AEQU_RS07985 SM00316 Ribosomal protein S1-like RNA-binding domain AEQU_RS08005 SM00421 helix_turn_helix, Lux Regulon AEQU_RS08065 SM00883 Chaperonin 10 Kd subunit AEQU_RS08070 SM00421 helix_turn_helix, Lux Regulon AEQU_RS08070 SM00448 cheY-homologous receiver domain AEQU_RS08160 SM00244 prohibitin homologues AEQU_RS08165 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS08175 SM00448 cheY-homologous receiver domain AEQU_RS08175 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS08180 SM00387 Histidine kinase-like ATPases AEQU_RS08180 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS08240 SM00448 cheY-homologous receiver domain AEQU_RS08240 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS08300 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08330 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08350 SM00518 AP endonuclease family 2 AEQU_RS08400 SM00421 helix_turn_helix, Lux Regulon AEQU_RS08480 SM00487 DEAD-like helicases superfamily AEQU_RS08480 SM00490 helicase superfamily c-terminal domain AEQU_RS08490 SM00421 helix_turn_helix, Lux Regulon AEQU_RS08505 SM00481 DNA polymerase alpha chain like domain AEQU_RS08510 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08520 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08555 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08575 SM00487 DEAD-like helicases superfamily AEQU_RS08575 SM00490 helicase superfamily c-terminal domain AEQU_RS08600 SM00382 ATPases associated with a variety of cellular activities AEQU_RS08620 SM00849 Metallo-beta-lactamase superfamily AEQU_RS08660 SM00014 Acid phosphatase homologues AEQU_RS08680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS08715 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS08740 SM00900 AEQU_RS08740 AEQU_RS08745 SM00450 Rhodanese Homology Domain AEQU_RS08760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AEQU_RS08785 SM00450 Rhodanese Homology Domain AEQU_RS08815 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS08835 SM00421 helix_turn_helix, Lux Regulon AEQU_RS08885 SM00822 AEQU_RS08885 AEQU_RS08945 SM00487 DEAD-like helicases superfamily AEQU_RS09020 SM00450 Rhodanese Homology Domain AEQU_RS09025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AEQU_RS09060 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09095 SM01329 AEQU_RS09095 AEQU_RS09145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS09155 SM00448 cheY-homologous receiver domain AEQU_RS09155 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS09160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AEQU_RS09160 SM00387 Histidine kinase-like ATPases AEQU_RS09160 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS09185 SM00529 Helix-turn-helix diphteria tox regulatory element AEQU_RS09200 SM00899 AEQU_RS09200 AEQU_RS09205 SM00899 AEQU_RS09205 AEQU_RS09275 SM00858 AEQU_RS09275 AEQU_RS09295 SM00382 ATPases associated with a variety of cellular activities AEQU_RS09305 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09305 SM00448 cheY-homologous receiver domain AEQU_RS09310 SM00342 helix_turn_helix, arabinose operon control protein AEQU_RS09350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS09355 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09360 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09405 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS09430 SM00382 ATPases associated with a variety of cellular activities AEQU_RS09435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS09440 SM00382 ATPases associated with a variety of cellular activities AEQU_RS09450 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS09465 SM00382 ATPases associated with a variety of cellular activities AEQU_RS09470 SM00387 Histidine kinase-like ATPases AEQU_RS09470 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS09475 SM00448 cheY-homologous receiver domain AEQU_RS09475 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS09510 SM00091 PAS domain AEQU_RS09510 SM00387 Histidine kinase-like ATPases AEQU_RS09510 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS09510 SM00448 cheY-homologous receiver domain AEQU_RS09540 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS09540 SM01240 AEQU_RS09540 AEQU_RS09580 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09620 SM00448 cheY-homologous receiver domain AEQU_RS09620 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS09625 SM00387 Histidine kinase-like ATPases AEQU_RS09625 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS09640 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09680 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS09710 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09735 SM00387 Histidine kinase-like ATPases AEQU_RS09735 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS09745 SM00382 ATPases associated with a variety of cellular activities AEQU_RS09750 SM00448 cheY-homologous receiver domain AEQU_RS09750 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS09760 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09770 SM01230 AEQU_RS09770 AEQU_RS09800 SM01007 Class II Aldolase and Adducin N-terminal domain AEQU_RS09895 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS09950 SM00421 helix_turn_helix, Lux Regulon AEQU_RS09975 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AEQU_RS09995 SM00421 helix_turn_helix, Lux Regulon AEQU_RS10095 SM01133 AEQU_RS10095 AEQU_RS10145 SM00220 Serine/Threonine protein kinases, catalytic domain AEQU_RS10150 SM00518 AP endonuclease family 2 AEQU_RS10200 SM01211 AEQU_RS10200 AEQU_RS10215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AEQU_RS10215 SM00387 Histidine kinase-like ATPases AEQU_RS10215 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS10220 SM00448 cheY-homologous receiver domain AEQU_RS10220 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS10250 SM00421 helix_turn_helix, Lux Regulon AEQU_RS10255 SM00998 Adenylosuccinate lyase C-terminus AEQU_RS10295 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS10295 SM00924 MgtE intracellular N domain AEQU_RS10365 SM00100 Cyclic nucleotide-monophosphate binding domain AEQU_RS10365 SM00419 helix_turn_helix, cAMP Regulatory protein AEQU_RS10405 SM00382 ATPases associated with a variety of cellular activities AEQU_RS10485 SM00421 helix_turn_helix, Lux Regulon AEQU_RS10500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AEQU_RS10500 SM00267 diguanylate cyclase AEQU_RS10545 SM00849 Metallo-beta-lactamase superfamily AEQU_RS10550 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS10565 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS10580 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS10585 SM00342 helix_turn_helix, arabinose operon control protein AEQU_RS10585 SM00871 Bacterial transcription activator, effector binding domain AEQU_RS10670 SM00422 helix_turn_helix, mercury resistance AEQU_RS10695 SM00421 helix_turn_helix, Lux Regulon AEQU_RS10770 SM00421 helix_turn_helix, Lux Regulon AEQU_RS10780 SM00900 AEQU_RS10780 AEQU_RS10805 SM00382 ATPases associated with a variety of cellular activities AEQU_RS10820 SM00448 cheY-homologous receiver domain AEQU_RS10820 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS10825 SM00387 Histidine kinase-like ATPases AEQU_RS10825 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS10850 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS10880 SM00382 ATPases associated with a variety of cellular activities AEQU_RS10940 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AEQU_RS10950 SM00382 ATPases associated with a variety of cellular activities AEQU_RS10980 SM00460 Transglutaminase/protease-like homologues AEQU_RS10985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AEQU_RS10985 SM00387 Histidine kinase-like ATPases AEQU_RS10985 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS10985 SM00448 cheY-homologous receiver domain AEQU_RS10995 SM00267 diguanylate cyclase AEQU_RS10995 SM00448 cheY-homologous receiver domain AEQU_RS10995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AEQU_RS11005 SM00448 cheY-homologous receiver domain AEQU_RS11005 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS11010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AEQU_RS11010 SM00387 Histidine kinase-like ATPases AEQU_RS11010 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS11050 SM01001 AIR carboxylase AEQU_RS11095 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS11100 SM00062 Bacterial periplasmic substrate-binding proteins AEQU_RS11100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AEQU_RS11110 SM00382 ATPases associated with a variety of cellular activities AEQU_RS11140 SM00240 Forkhead associated domain AEQU_RS11145 SM00240 Forkhead associated domain AEQU_RS11150 SM00331 Sigma factor PP2C-like phosphatases AEQU_RS11150 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AEQU_RS11160 SM00220 Serine/Threonine protein kinases, catalytic domain AEQU_RS11160 SM00740 AEQU_RS11160 AEQU_RS11175 SM00387 Histidine kinase-like ATPases AEQU_RS11175 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS11180 SM00448 cheY-homologous receiver domain AEQU_RS11180 SM00862 Transcriptional regulatory protein, C terminal AEQU_RS11190 SM00382 ATPases associated with a variety of cellular activities AEQU_RS11305 SM00876 Biotin and Thiamin Synthesis associated domain AEQU_RS11310 SM00729 Elongator protein 3, MiaB family, Radical SAM AEQU_RS11310 SM00876 Biotin and Thiamin Synthesis associated domain AEQU_RS11315 SM00902 Iron hydrogenase small subunit AEQU_RS11320 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AEQU_RS11360 SM00893 Electron transfer flavoprotein domain AEQU_RS11370 SM00421 helix_turn_helix, Lux Regulon AEQU_RS11400 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS11420 SM00421 helix_turn_helix, Lux Regulon AEQU_RS11455 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS11460 SM00116 Domain in cystathionine beta-synthase and other proteins. AEQU_RS11460 SM01091 Transporter associated domain AEQU_RS11485 SM00838 Elongation factor G C-terminus AEQU_RS11490 SM00271 DnaJ molecular chaperone homology domain AEQU_RS11510 SM00327 von Willebrand factor (vWF) type A domain AEQU_RS11560 SM00710 Parallel beta-helix repeats AEQU_RS11610 SM00434 DNA Topoisomerase IV AEQU_RS11615 SM00387 Histidine kinase-like ATPases AEQU_RS11615 SM00433 TopoisomeraseII AEQU_RS11625 SM00480 DNA polymerase III beta subunit AEQU_RS11645 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS11675 SM00345 helix_turn_helix gluconate operon transcriptional repressor AEQU_RS11695 SM00387 Histidine kinase-like ATPases AEQU_RS11695 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS11700 SM00220 Serine/Threonine protein kinases, catalytic domain AEQU_RS11720 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS11730 SM00387 Histidine kinase-like ATPases AEQU_RS11730 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS11730 SM00448 cheY-homologous receiver domain AEQU_RS11765 SM00421 helix_turn_helix, Lux Regulon AEQU_RS11775 SM00047 Lysozyme subfamily 2 AEQU_RS11775 SM00740 AEQU_RS11775 AEQU_RS11835 SM00450 Rhodanese Homology Domain AEQU_RS11845 SM00671 Sel1-like repeats. AEQU_RS11865 SM00740 AEQU_RS11865 AEQU_RS11905 SM00635 Bacterial Ig-like domain 2 AEQU_RS11930 SM00347 helix_turn_helix multiple antibiotic resistance protein AEQU_RS11935 SM00387 Histidine kinase-like ATPases AEQU_RS11935 SM00388 His Kinase A (phosphoacceptor) domain AEQU_RS11935 SM00448 cheY-homologous receiver domain AEQU_RS11990 SM00530 Helix-turn-helix XRE-family like proteins AEQU_RS12065 SM00382 ATPases associated with a variety of cellular activities