locus-tag class description HRR28_RS00015 PF00072 Response regulator receiver domain HRR28_RS00020 PF14535 AMP-binding enzyme C-terminal domain HRR28_RS00020 PF00501 AMP-binding enzyme HRR28_RS00035 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS00040 PF00890 FAD binding domain HRR28_RS00040 PF04205 FMN-binding domain HRR28_RS00040 PF03358 NADPH-dependent FMN reductase HRR28_RS00045 PF00072 Response regulator receiver domain HRR28_RS00045 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS00050 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS00055 PF13247 4Fe-4S dicluster domain HRR28_RS00055 PF12800 4Fe-4S binding domain HRR28_RS00060 PF01568 Molydopterin dinucleotide binding domain HRR28_RS00060 PF00384 Molybdopterin oxidoreductase HRR28_RS00060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS00090 PF00731 AIR carboxylase HRR28_RS00115 PF00890 FAD binding domain HRR28_RS00115 PF04205 FMN-binding domain HRR28_RS00145 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRR28_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS00155 PF00005 ABC transporter HRR28_RS00170 PF04012 PspA/IM30 family HRR28_RS00190 PF03109 ABC1 family HRR28_RS00215 PF01098 Cell cycle protein HRR28_RS00235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS00235 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS00235 PF00989 PAS fold HRR28_RS00235 PF16736 Single Cache-like HRR28_RS00240 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS00240 PF00072 Response regulator receiver domain HRR28_RS00245 PF02690 Na+/Pi-cotransporter HRR28_RS00250 PF03358 NADPH-dependent FMN reductase HRR28_RS00250 PF04205 FMN-binding domain HRR28_RS00250 PF00890 FAD binding domain HRR28_RS00255 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS00255 PF00072 Response regulator receiver domain HRR28_RS00270 PF00005 ABC transporter HRR28_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS00285 PF12849 PBP superfamily domain HRR28_RS00305 PF00005 ABC transporter HRR28_RS00315 PF13597 Anaerobic ribonucleoside-triphosphate reductase HRR28_RS00315 PF03477 ATP cone domain HRR28_RS00325 PF00005 ABC transporter HRR28_RS00350 PF01061 ABC-2 type transporter HRR28_RS00355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRR28_RS00355 PF01926 50S ribosome-binding GTPase HRR28_RS00365 PF06968 Biotin and Thiamin Synthesis associated domain HRR28_RS00365 PF04055 Radical SAM superfamily HRR28_RS00370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HRR28_RS00370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRR28_RS00370 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS00375 PF00155 Aminotransferase class I and II HRR28_RS00400 PF00465 Iron-containing alcohol dehydrogenase HRR28_RS00420 PF00132 Bacterial transferase hexapeptide (six repeats) HRR28_RS00425 PF07690 Major Facilitator Superfamily HRR28_RS00430 PF01595 Cyclin M transmembrane N-terminal domain HRR28_RS00430 PF00571 CBS domain HRR28_RS00430 PF03471 Transporter associated domain HRR28_RS00435 PF00072 Response regulator receiver domain HRR28_RS00435 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS00460 PF00005 ABC transporter HRR28_RS00465 PF00639 PPIC-type PPIASE domain HRR28_RS00465 PF09312 SurA N-terminal domain HRR28_RS00475 PF00684 DnaJ central domain HRR28_RS00475 PF01556 DnaJ C terminal domain HRR28_RS00475 PF00226 DnaJ domain HRR28_RS00540 PF13276 HTH-like domain HRR28_RS00540 PF00665 Integrase core domain HRR28_RS00540 PF13333 Integrase core domain HRR28_RS00590 PF03989 DNA gyrase C-terminal domain, beta-propeller HRR28_RS00590 PF00521 DNA gyrase/topoisomerase IV, subunit A HRR28_RS00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS00595 PF01751 Toprim domain HRR28_RS00595 PF00986 DNA gyrase B subunit, carboxyl terminus HRR28_RS00595 PF00204 DNA gyrase B HRR28_RS00600 PF02463 RecF/RecN/SMC N terminal domain HRR28_RS00605 PF00712 DNA polymerase III beta subunit, N-terminal domain HRR28_RS00605 PF02768 DNA polymerase III beta subunit, C-terminal domain HRR28_RS00605 PF02767 DNA polymerase III beta subunit, central domain HRR28_RS00615 PF00308 Bacterial dnaA protein HRR28_RS00615 PF08299 Bacterial dnaA protein helix-turn-helix HRR28_RS00615 PF11638 DnaA N-terminal domain HRR28_RS00620 PF00468 Ribosomal protein L34 HRR28_RS00625 PF00825 Ribonuclease P HRR28_RS00630 PF01809 Putative membrane protein insertion efficiency factor HRR28_RS00635 PF14849 YidC periplasmic domain HRR28_RS00635 PF02096 60Kd inner membrane protein HRR28_RS00640 PF01424 R3H domain HRR28_RS00640 PF14804 Jag N-terminus HRR28_RS00645 PF02527 rRNA small subunit methyltransferase G HRR28_RS00650 PF13614 AAA domain HRR28_RS00655 PF02195 ParB-like nuclease domain HRR28_RS00655 PF17762 HTH domain found in ParB protein HRR28_RS00665 PF01695 IstB-like ATP binding protein HRR28_RS00675 PF01797 Transposase IS200 like HRR28_RS00680 PF04055 Radical SAM superfamily HRR28_RS00685 PF01820 D-ala D-ala ligase N-terminus HRR28_RS00685 PF07478 D-ala D-ala ligase C-terminus HRR28_RS00695 PF04851 Type III restriction enzyme, res subunit HRR28_RS00695 PF00929 Exonuclease HRR28_RS00695 PF13307 Helicase C-terminal domain HRR28_RS00715 PF01797 Transposase IS200 like HRR28_RS00720 PF01250 Ribosomal protein S6 HRR28_RS00725 PF00436 Single-strand binding protein family HRR28_RS00730 PF01084 Ribosomal protein S18 HRR28_RS00735 PF01281 Ribosomal protein L9, N-terminal domain HRR28_RS00735 PF03948 Ribosomal protein L9, C-terminal domain HRR28_RS00740 PF03796 DnaB-like helicase C terminal domain HRR28_RS00740 PF00772 DnaB-like helicase N terminal domain HRR28_RS00750 PF13514 AAA domain HRR28_RS00760 PF00709 Adenylosuccinate synthetase HRR28_RS00765 PF02844 Phosphoribosylglycinamide synthetase, N domain HRR28_RS00765 PF02843 Phosphoribosylglycinamide synthetase, C domain HRR28_RS00765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRR28_RS00770 PF04055 Radical SAM superfamily HRR28_RS00795 PF12850 Calcineurin-like phosphoesterase superfamily domain HRR28_RS00800 PF00990 Diguanylate cyclase, GGDEF domain HRR28_RS00800 PF17158 Membrane-associated sensor, integral membrane domain HRR28_RS00810 PF03807 NADP oxidoreductase coenzyme F420-dependent HRR28_RS00810 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRR28_RS00815 PF00324 Amino acid permease HRR28_RS00820 PF03069 Acetamidase/Formamidase family HRR28_RS00840 PF01381 Helix-turn-helix HRR28_RS00845 PF00155 Aminotransferase class I and II HRR28_RS00855 PF00881 Nitroreductase family HRR28_RS00870 PF13614 AAA domain HRR28_RS00875 PF02195 ParB-like nuclease domain HRR28_RS00875 PF17762 HTH domain found in ParB protein HRR28_RS00885 PF00877 NlpC/P60 family HRR28_RS00895 PF00176 SNF2 family N-terminal domain HRR28_RS00895 PF00271 Helicase conserved C-terminal domain HRR28_RS00910 PF00145 C-5 cytosine-specific DNA methylase HRR28_RS00930 PF05713 Bacterial mobilisation protein (MobC) HRR28_RS00935 PF03432 Relaxase/Mobilisation nuclease domain HRR28_RS00985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRR28_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS01000 PF00005 ABC transporter HRR28_RS01000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRR28_RS01005 PF00975 Thioesterase domain HRR28_RS01015 PF00872 Transposase, Mutator family HRR28_RS01035 PF00550 Phosphopantetheine attachment site HRR28_RS01035 PF08242 Methyltransferase domain HRR28_RS01035 PF00668 Condensation domain HRR28_RS01035 PF00501 AMP-binding enzyme HRR28_RS01040 PF00550 Phosphopantetheine attachment site HRR28_RS01040 PF00501 AMP-binding enzyme HRR28_RS01040 PF00668 Condensation domain HRR28_RS01040 PF08242 Methyltransferase domain HRR28_RS01045 PF00501 AMP-binding enzyme HRR28_RS01045 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS01055 PF00005 ABC transporter HRR28_RS01055 PF08021 Siderophore-interacting FAD-binding domain HRR28_RS01055 PF00664 ABC transporter transmembrane region HRR28_RS01055 PF04954 Siderophore-interacting protein HRR28_RS01060 PF00005 ABC transporter HRR28_RS01060 PF00664 ABC transporter transmembrane region HRR28_RS01070 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRR28_RS01070 PF02772 S-adenosylmethionine synthetase, central domain HRR28_RS01070 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRR28_RS01075 PF00291 Pyridoxal-phosphate dependent enzyme HRR28_RS01080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HRR28_RS01080 PF05221 S-adenosyl-L-homocysteine hydrolase HRR28_RS01085 PF01648 4'-phosphopantetheinyl transferase superfamily HRR28_RS01085 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HRR28_RS01090 PF00872 Transposase, Mutator family HRR28_RS01100 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HRR28_RS01125 PF01695 IstB-like ATP binding protein HRR28_RS01140 PF17762 HTH domain found in ParB protein HRR28_RS01140 PF02195 ParB-like nuclease domain HRR28_RS01155 PF01695 IstB-like ATP binding protein HRR28_RS01160 PF00665 Integrase core domain HRR28_RS01165 PF00665 Integrase core domain HRR28_RS01170 PF01695 IstB-like ATP binding protein HRR28_RS01175 PF00872 Transposase, Mutator family HRR28_RS01185 PF01434 Peptidase family M41 HRR28_RS01185 PF17862 AAA+ lid domain HRR28_RS01185 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS01205 PF14537 Cytochrome c3 HRR28_RS01205 PF00890 FAD binding domain HRR28_RS01220 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS01220 PF00072 Response regulator receiver domain HRR28_RS01225 PF18698 Histidine kinase sensor domain HRR28_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS01225 PF00672 HAMP domain HRR28_RS01225 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS01235 PF12833 Helix-turn-helix domain HRR28_RS01255 PF00005 ABC transporter HRR28_RS01265 PF00664 ABC transporter transmembrane region HRR28_RS01265 PF08021 Siderophore-interacting FAD-binding domain HRR28_RS01265 PF04954 Siderophore-interacting protein HRR28_RS01265 PF00005 ABC transporter HRR28_RS01270 PF00005 ABC transporter HRR28_RS01270 PF00664 ABC transporter transmembrane region HRR28_RS01290 PF00171 Aldehyde dehydrogenase family HRR28_RS01300 PF13419 Haloacid dehalogenase-like hydrolase HRR28_RS01310 PF16363 GDP-mannose 4,6 dehydratase HRR28_RS01315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRR28_RS01315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRR28_RS01315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRR28_RS01315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRR28_RS01330 PF08753 NikR C terminal nickel binding domain HRR28_RS01330 PF01402 Ribbon-helix-helix protein, copG family HRR28_RS01335 PF00586 AIR synthase related protein, N-terminal domain HRR28_RS01335 PF02769 AIR synthase related protein, C-terminal domain HRR28_RS01360 PF00012 Hsp70 protein HRR28_RS01365 PF01025 GrpE HRR28_RS01370 PF00226 DnaJ domain HRR28_RS01370 PF01556 DnaJ C terminal domain HRR28_RS01370 PF00684 DnaJ central domain HRR28_RS01375 PF13411 MerR HTH family regulatory protein HRR28_RS01380 PF17871 AAA lid domain HRR28_RS01380 PF10431 C-terminal, D2-small domain, of ClpB protein HRR28_RS01380 PF02861 Clp amino terminal domain, pathogenicity island component HRR28_RS01380 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS01380 PF07724 AAA domain (Cdc48 subfamily) HRR28_RS01390 PF00890 FAD binding domain HRR28_RS01390 PF04205 FMN-binding domain HRR28_RS01390 PF03358 NADPH-dependent FMN reductase HRR28_RS01400 PF01546 Peptidase family M20/M25/M40 HRR28_RS01405 PF04397 LytTr DNA-binding domain HRR28_RS01405 PF00072 Response regulator receiver domain HRR28_RS01410 PF00342 Phosphoglucose isomerase HRR28_RS01415 PF07503 HypF finger HRR28_RS01415 PF00708 Acylphosphatase HRR28_RS01415 PF17788 HypF Kae1-like domain HRR28_RS01415 PF01300 Telomere recombination HRR28_RS01420 PF01455 HupF/HypC family HRR28_RS01425 PF01924 Hydrogenase formation hypA family HRR28_RS01430 PF01541 GIY-YIG catalytic domain HRR28_RS01480 PF00384 Molybdopterin oxidoreductase HRR28_RS01480 PF01568 Molydopterin dinucleotide binding domain HRR28_RS01485 PF13247 4Fe-4S dicluster domain HRR28_RS01485 PF12800 4Fe-4S binding domain HRR28_RS01500 PF09424 Yqey-like protein HRR28_RS01505 PF02687 FtsX-like permease family HRR28_RS01510 PF00005 ABC transporter HRR28_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS01520 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS01520 PF00072 Response regulator receiver domain HRR28_RS01540 PF03703 Bacterial PH domain HRR28_RS01545 PF00571 CBS domain HRR28_RS01545 PF03471 Transporter associated domain HRR28_RS01555 PF02254 TrkA-N domain HRR28_RS01555 PF02080 TrkA-C domain HRR28_RS01560 PF02080 TrkA-C domain HRR28_RS01560 PF02254 TrkA-N domain HRR28_RS01570 PF01202 Shikimate kinase HRR28_RS01575 PF01235 Sodium:alanine symporter family HRR28_RS01580 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HRR28_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS01605 PF13180 PDZ domain HRR28_RS01610 PF04055 Radical SAM superfamily HRR28_RS01610 PF06463 Molybdenum Cofactor Synthesis C HRR28_RS01620 PF13443 Cro/C1-type HTH DNA-binding domain HRR28_RS01645 PF01695 IstB-like ATP binding protein HRR28_RS01670 PF00696 Amino acid kinase family HRR28_RS01675 PF01765 Ribosome recycling factor HRR28_RS01680 PF01255 Putative undecaprenyl diphosphate synthase HRR28_RS01690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRR28_RS01690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRR28_RS01690 PF13288 DXP reductoisomerase C-terminal domain HRR28_RS01700 PF02163 Peptidase family M50 HRR28_RS01700 PF17820 PDZ domain HRR28_RS01705 PF04551 GcpE protein HRR28_RS01710 PF03129 Anticodon binding domain HRR28_RS01710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRR28_RS01710 PF04073 Aminoacyl-tRNA editing domain HRR28_RS01715 PF01381 Helix-turn-helix HRR28_RS01725 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRR28_RS01725 PF00588 SpoU rRNA Methylase family HRR28_RS01735 PF01381 Helix-turn-helix HRR28_RS01750 PF01381 Helix-turn-helix HRR28_RS01765 PF01494 FAD binding domain HRR28_RS01775 PF07690 Major Facilitator Superfamily HRR28_RS01780 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS01780 PF00501 AMP-binding enzyme HRR28_RS01785 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS01785 PF17874 MalT-like TPR region HRR28_RS01790 PF02515 CoA-transferase family III HRR28_RS01810 PF02515 CoA-transferase family III HRR28_RS01815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS01815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS01815 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS01820 PF01012 Electron transfer flavoprotein domain HRR28_RS01825 PF00766 Electron transfer flavoprotein FAD-binding domain HRR28_RS01825 PF01012 Electron transfer flavoprotein domain HRR28_RS01835 PF00872 Transposase, Mutator family HRR28_RS01840 PF00072 Response regulator receiver domain HRR28_RS01840 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS01850 PF00384 Molybdopterin oxidoreductase HRR28_RS01850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS01850 PF01568 Molydopterin dinucleotide binding domain HRR28_RS01855 PF13247 4Fe-4S dicluster domain HRR28_RS01865 PF07724 AAA domain (Cdc48 subfamily) HRR28_RS01865 PF17871 AAA lid domain HRR28_RS01865 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS01865 PF02861 Clp amino terminal domain, pathogenicity island component HRR28_RS01865 PF10431 C-terminal, D2-small domain, of ClpB protein HRR28_RS01880 PF01661 Macro domain HRR28_RS01890 PF07690 Major Facilitator Superfamily HRR28_RS01895 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS01895 PF00072 Response regulator receiver domain HRR28_RS01900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRR28_RS01900 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS01900 PF00072 Response regulator receiver domain HRR28_RS01905 PF10518 TAT (twin-arginine translocation) pathway signal sequence HRR28_RS01905 PF00384 Molybdopterin oxidoreductase HRR28_RS01905 PF01568 Molydopterin dinucleotide binding domain HRR28_RS01905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS01910 PF13247 4Fe-4S dicluster domain HRR28_RS01910 PF12800 4Fe-4S binding domain HRR28_RS01920 PF00005 ABC transporter HRR28_RS01945 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS01945 PF00072 Response regulator receiver domain HRR28_RS01955 PF02219 Methylenetetrahydrofolate reductase HRR28_RS01975 PF02310 B12 binding domain HRR28_RS01975 PF02607 B12 binding domain HRR28_RS01985 PF10609 NUBPL iron-transfer P-loop NTPase HRR28_RS02000 PF01979 Amidohydrolase family HRR28_RS02010 PF03764 Elongation factor G, domain IV HRR28_RS02010 PF00679 Elongation factor G C-terminus HRR28_RS02010 PF03144 Elongation factor Tu domain 2 HRR28_RS02010 PF00009 Elongation factor Tu GTP binding domain HRR28_RS02010 PF14492 Elongation Factor G, domain II HRR28_RS02015 PF04561 RNA polymerase Rpb2, domain 2 HRR28_RS02015 PF04565 RNA polymerase Rpb2, domain 3 HRR28_RS02015 PF10385 RNA polymerase beta subunit external 1 domain HRR28_RS02015 PF00562 RNA polymerase Rpb2, domain 6 HRR28_RS02015 PF04560 RNA polymerase Rpb2, domain 7 HRR28_RS02015 PF04563 RNA polymerase beta subunit HRR28_RS02020 PF04983 RNA polymerase Rpb1, domain 3 HRR28_RS02020 PF00623 RNA polymerase Rpb1, domain 2 HRR28_RS02020 PF05000 RNA polymerase Rpb1, domain 4 HRR28_RS02020 PF04998 RNA polymerase Rpb1, domain 5 HRR28_RS02020 PF04997 RNA polymerase Rpb1, domain 1 HRR28_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS02025 PF03466 LysR substrate binding domain HRR28_RS02040 PF02613 Nitrate reductase delta subunit HRR28_RS02055 PF00384 Molybdopterin oxidoreductase HRR28_RS02055 PF01568 Molydopterin dinucleotide binding domain HRR28_RS02060 PF12800 4Fe-4S binding domain HRR28_RS02060 PF13247 4Fe-4S dicluster domain HRR28_RS02085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HRR28_RS02090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRR28_RS02090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRR28_RS02090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRR28_RS02090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRR28_RS02100 PF00209 Sodium:neurotransmitter symporter family HRR28_RS02115 PF00893 Small Multidrug Resistance protein HRR28_RS02135 PF03976 Polyphosphate kinase 2 (PPK2) HRR28_RS02140 PF04203 Sortase domain HRR28_RS02145 PF13537 Glutamine amidotransferase domain HRR28_RS02145 PF00156 Phosphoribosyl transferase domain HRR28_RS02150 PF00586 AIR synthase related protein, N-terminal domain HRR28_RS02150 PF02769 AIR synthase related protein, C-terminal domain HRR28_RS02155 PF00551 Formyl transferase HRR28_RS02170 PF01808 AICARFT/IMPCHase bienzyme HRR28_RS02170 PF02142 MGS-like domain HRR28_RS02190 PF03061 Thioesterase superfamily HRR28_RS02200 PF00871 Acetokinase family HRR28_RS02210 PF00465 Iron-containing alcohol dehydrogenase HRR28_RS02225 PF02416 mttA/Hcf106 family HRR28_RS02230 PF03449 Transcription elongation factor, N-terminal HRR28_RS02230 PF01272 Transcription elongation factor, GreA/GreB, C-term HRR28_RS02235 PF01336 OB-fold nucleic acid binding domain HRR28_RS02235 PF00152 tRNA synthetases class II (D, K and N) HRR28_RS02245 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS02245 PF07724 AAA domain (Cdc48 subfamily) HRR28_RS02245 PF17871 AAA lid domain HRR28_RS02245 PF02861 Clp amino terminal domain, pathogenicity island component HRR28_RS02245 PF10431 C-terminal, D2-small domain, of ClpB protein HRR28_RS02250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRR28_RS02255 PF02542 YgbB family HRR28_RS02265 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS02265 PF17874 MalT-like TPR region HRR28_RS02270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRR28_RS02270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS02275 PF04539 Sigma-70 region 3 HRR28_RS02275 PF04542 Sigma-70 region 2 HRR28_RS02275 PF04545 Sigma-70, region 4 HRR28_RS02285 PF04607 Region found in RelA / SpoT proteins HRR28_RS02300 PF09190 DALR domain HRR28_RS02300 PF01406 tRNA synthetases class I (C) catalytic domain HRR28_RS02320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRR28_RS02320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HRR28_RS02325 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRR28_RS02325 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRR28_RS02330 PF01960 ArgJ family HRR28_RS02335 PF00696 Amino acid kinase family HRR28_RS02340 PF00202 Aminotransferase class-III HRR28_RS02345 PF00764 Arginosuccinate synthase HRR28_RS02350 PF00206 Lyase HRR28_RS02350 PF14698 Argininosuccinate lyase C-terminal HRR28_RS02355 PF00912 Transglycosylase HRR28_RS02355 PF00905 Penicillin binding protein transpeptidase domain HRR28_RS02365 PF12392 Collagenase HRR28_RS02365 PF01136 Peptidase family U32 HRR28_RS02380 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS02385 PF01479 S4 domain HRR28_RS02385 PF00579 tRNA synthetases class I (W and Y) HRR28_RS02400 PF12791 Anti-sigma factor N-terminus HRR28_RS02440 PF00694 Aconitase C-terminal domain HRR28_RS02440 PF00330 Aconitase family (aconitate hydratase) HRR28_RS02445 PF01336 OB-fold nucleic acid binding domain HRR28_RS02445 PF00152 tRNA synthetases class II (D, K and N) HRR28_RS02445 PF02938 GAD domain HRR28_RS02470 PF12169 DNA polymerase III subunits gamma and tau domain III HRR28_RS02475 PF02575 YbaB/EbfC DNA-binding family HRR28_RS02480 PF02132 RecR protein HRR28_RS02480 PF00633 Helix-hairpin-helix motif HRR28_RS02480 PF13662 Toprim domain HRR28_RS02495 PF03606 C4-dicarboxylate anaerobic carrier HRR28_RS02505 PF00557 Metallopeptidase family M24 HRR28_RS02520 PF02633 Creatinine amidohydrolase HRR28_RS02525 PF08946 Osmosensory transporter coiled coil HRR28_RS02525 PF00083 Sugar (and other) transporter HRR28_RS02540 PF01556 DnaJ C terminal domain HRR28_RS02540 PF00684 DnaJ central domain HRR28_RS02540 PF00226 DnaJ domain HRR28_RS02570 PF01869 BadF/BadG/BcrA/BcrD ATPase family HRR28_RS02575 PF02613 Nitrate reductase delta subunit HRR28_RS02585 PF12800 4Fe-4S binding domain HRR28_RS02585 PF13247 4Fe-4S dicluster domain HRR28_RS02590 PF12800 4Fe-4S binding domain HRR28_RS02590 PF13247 4Fe-4S dicluster domain HRR28_RS02595 PF01568 Molydopterin dinucleotide binding domain HRR28_RS02595 PF00384 Molybdopterin oxidoreductase HRR28_RS02595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS02600 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS02605 PF07690 Major Facilitator Superfamily HRR28_RS02620 PF00183 Hsp90 protein HRR28_RS02630 PF00588 SpoU rRNA Methylase family HRR28_RS02640 PF03819 MazG nucleotide pyrophosphohydrolase domain HRR28_RS02645 PF03466 LysR substrate binding domain HRR28_RS02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS02650 PF04205 FMN-binding domain HRR28_RS02650 PF00890 FAD binding domain HRR28_RS02655 PF00872 Transposase, Mutator family HRR28_RS02660 PF00009 Elongation factor Tu GTP binding domain HRR28_RS02660 PF03764 Elongation factor G, domain IV HRR28_RS02660 PF14492 Elongation Factor G, domain II HRR28_RS02660 PF00679 Elongation factor G C-terminus HRR28_RS02665 PF02384 N-6 DNA Methylase HRR28_RS02675 PF02021 Uncharacterised protein family UPF0102 HRR28_RS02685 PF13614 AAA domain HRR28_RS02750 PF01022 Bacterial regulatory protein, arsR family HRR28_RS02755 PF12727 PBP superfamily domain HRR28_RS02755 PF12728 Helix-turn-helix domain HRR28_RS02765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRR28_RS02765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRR28_RS02800 PF00877 NlpC/P60 family HRR28_RS02835 PF01695 IstB-like ATP binding protein HRR28_RS02860 PF11799 impB/mucB/samB family C-terminal domain HRR28_RS02860 PF00817 impB/mucB/samB family HRR28_RS02905 PF01022 Bacterial regulatory protein, arsR family HRR28_RS02950 PF13173 AAA domain HRR28_RS02950 PF13635 Domain of unknown function (DUF4143) HRR28_RS02955 PF03747 ADP-ribosylglycohydrolase HRR28_RS02960 PF02661 Fic/DOC family HRR28_RS02960 PF13784 Fic/DOC family N-terminal HRR28_RS02970 PF00440 Bacterial regulatory proteins, tetR family HRR28_RS02980 PF00665 Integrase core domain HRR28_RS02985 PF01695 IstB-like ATP binding protein HRR28_RS03010 PF04851 Type III restriction enzyme, res subunit HRR28_RS03010 PF08774 VRR-NUC domain HRR28_RS03015 PF01555 DNA methylase HRR28_RS03015 PF18273 Type III R-M EcoP15I C-terminal domain HRR28_RS03020 PF00872 Transposase, Mutator family HRR28_RS03090 PF01740 STAS domain HRR28_RS03090 PF00916 Sulfate permease family HRR28_RS03095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRR28_RS03120 PF04304 Protein of unknown function (DUF454) HRR28_RS03135 PF02386 Cation transport protein HRR28_RS03140 PF02080 TrkA-C domain HRR28_RS03140 PF02254 TrkA-N domain HRR28_RS03155 PF01740 STAS domain HRR28_RS03155 PF00916 Sulfate permease family HRR28_RS03165 PF03358 NADPH-dependent FMN reductase HRR28_RS03165 PF04205 FMN-binding domain HRR28_RS03165 PF00890 FAD binding domain HRR28_RS03180 PF13673 Acetyltransferase (GNAT) domain HRR28_RS03190 PF00696 Amino acid kinase family HRR28_RS03195 PF00155 Aminotransferase class I and II HRR28_RS03210 PF00156 Phosphoribosyl transferase domain HRR28_RS03220 PF06874 Firmicute fructose-1,6-bisphosphatase HRR28_RS03230 PF01966 HD domain HRR28_RS03230 PF13286 Phosphohydrolase-associated domain HRR28_RS03240 PF02535 ZIP Zinc transporter HRR28_RS03245 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS03245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRR28_RS03275 PF00890 FAD binding domain HRR28_RS03275 PF14537 Cytochrome c3 HRR28_RS03280 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS03305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRR28_RS03315 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS03325 PF03853 YjeF-related protein N-terminus HRR28_RS03325 PF01256 Carbohydrate kinase HRR28_RS03335 PF01569 PAP2 superfamily HRR28_RS03340 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRR28_RS03350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRR28_RS03360 PF00672 HAMP domain HRR28_RS03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS03360 PF01627 Hpt domain HRR28_RS03360 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS03360 PF00072 Response regulator receiver domain HRR28_RS03360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRR28_RS03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS03365 PF00072 Response regulator receiver domain HRR28_RS03365 PF09308 LuxQ, periplasmic HRR28_RS03365 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS03370 PF01042 Endoribonuclease L-PSP HRR28_RS03375 PF00753 Metallo-beta-lactamase superfamily HRR28_RS03385 PF01327 Polypeptide deformylase HRR28_RS03390 PF13538 UvrD-like helicase C-terminal domain HRR28_RS03395 PF00664 ABC transporter transmembrane region HRR28_RS03395 PF00005 ABC transporter HRR28_RS03405 PF00176 SNF2 family N-terminal domain HRR28_RS03405 PF00271 Helicase conserved C-terminal domain HRR28_RS03405 PF12419 SNF2 Helicase protein HRR28_RS03410 PF03358 NADPH-dependent FMN reductase HRR28_RS03410 PF04205 FMN-binding domain HRR28_RS03410 PF00890 FAD binding domain HRR28_RS03415 PF00440 Bacterial regulatory proteins, tetR family HRR28_RS03415 PF02909 Tetracyclin repressor-like, C-terminal domain HRR28_RS03420 PF01235 Sodium:alanine symporter family HRR28_RS03430 PF14537 Cytochrome c3 HRR28_RS03430 PF00890 FAD binding domain HRR28_RS03440 PF02698 DUF218 domain HRR28_RS03455 PF00890 FAD binding domain HRR28_RS03455 PF14537 Cytochrome c3 HRR28_RS03465 PF14537 Cytochrome c3 HRR28_RS03465 PF00890 FAD binding domain HRR28_RS03470 PF00270 DEAD/DEAH box helicase HRR28_RS03470 PF00271 Helicase conserved C-terminal domain HRR28_RS03470 PF08148 DSHCT (NUC185) domain HRR28_RS03480 PF17746 SfsA N-terminal OB domain HRR28_RS03480 PF03749 Sugar fermentation stimulation protein RE domain HRR28_RS03485 PF07722 Peptidase C26 HRR28_RS03490 PF02580 D-Tyr-tRNA(Tyr) deacylase HRR28_RS03495 PF13382 Adenine deaminase C-terminal domain HRR28_RS03495 PF01979 Amidohydrolase family HRR28_RS03505 PF03466 LysR substrate binding domain HRR28_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS03510 PF00384 Molybdopterin oxidoreductase HRR28_RS03510 PF01568 Molydopterin dinucleotide binding domain HRR28_RS03510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS03515 PF13247 4Fe-4S dicluster domain HRR28_RS03515 PF12800 4Fe-4S binding domain HRR28_RS03540 PF14537 Cytochrome c3 HRR28_RS03540 PF00890 FAD binding domain HRR28_RS03545 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS03560 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HRR28_RS03560 PF00703 Glycosyl hydrolases family 2 HRR28_RS03560 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HRR28_RS03560 PF02837 Glycosyl hydrolases family 2, sugar binding domain HRR28_RS03560 PF16355 Domain of unknown function (DUF4982) HRR28_RS03565 PF00288 GHMP kinases N terminal domain HRR28_RS03565 PF08544 GHMP kinases C terminal HRR28_RS03565 PF10509 Galactokinase galactose-binding signature HRR28_RS03570 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HRR28_RS03570 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HRR28_RS03575 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HRR28_RS03575 PF01871 AMMECR1 HRR28_RS03580 PF00085 Thioredoxin HRR28_RS03585 PF00248 Aldo/keto reductase family HRR28_RS03595 PF01261 Xylose isomerase-like TIM barrel HRR28_RS03600 PF03006 Haemolysin-III related HRR28_RS03605 PF02677 Epoxyqueuosine reductase QueH HRR28_RS03610 PF00210 Ferritin-like domain HRR28_RS03615 PF02687 FtsX-like permease family HRR28_RS03615 PF00005 ABC transporter HRR28_RS03615 PF12704 MacB-like periplasmic core domain HRR28_RS03620 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HRR28_RS03625 PF05958 tRNA (Uracil-5-)-methyltransferase HRR28_RS03625 PF01938 TRAM domain HRR28_RS03630 PF11734 TilS substrate C-terminal domain HRR28_RS03630 PF01171 PP-loop family HRR28_RS03635 PF02545 Maf-like protein HRR28_RS03645 PF17862 AAA+ lid domain HRR28_RS03645 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS03645 PF01434 Peptidase family M41 HRR28_RS03645 PF06480 FtsH Extracellular HRR28_RS03650 PF00809 Pterin binding enzyme HRR28_RS03660 PF01554 MatE HRR28_RS03665 PF02632 BioY family HRR28_RS03670 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS03670 PF00072 Response regulator receiver domain HRR28_RS03675 PF03309 Type III pantothenate kinase HRR28_RS03680 PF01268 Formate--tetrahydrofolate ligase HRR28_RS03685 PF04961 Formiminotransferase-cyclodeaminase HRR28_RS03690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRR28_RS03690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRR28_RS03695 PF17874 MalT-like TPR region HRR28_RS03695 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS03700 PF00890 FAD binding domain HRR28_RS03700 PF04205 FMN-binding domain HRR28_RS03705 PF01226 Formate/nitrite transporter HRR28_RS03710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HRR28_RS03715 PF00814 Glycoprotease family HRR28_RS03725 PF03814 Potassium-transporting ATPase A subunit HRR28_RS03735 PF02669 K+-transporting ATPase, c chain HRR28_RS03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS03740 PF02702 Osmosensitive K+ channel His kinase sensor domain HRR28_RS03740 PF13493 Domain of unknown function (DUF4118) HRR28_RS03740 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS03745 PF00072 Response regulator receiver domain HRR28_RS03745 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS03760 PF01145 SPFH domain / Band 7 family HRR28_RS03765 PF01568 Molydopterin dinucleotide binding domain HRR28_RS03765 PF00384 Molybdopterin oxidoreductase HRR28_RS03765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS03770 PF13247 4Fe-4S dicluster domain HRR28_RS03770 PF12800 4Fe-4S binding domain HRR28_RS03790 PF04073 Aminoacyl-tRNA editing domain HRR28_RS03810 PF01979 Amidohydrolase family HRR28_RS03820 PF02416 mttA/Hcf106 family HRR28_RS03825 PF00902 Sec-independent protein translocase protein (TatC) HRR28_RS03830 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HRR28_RS03835 PF02540 NAD synthase HRR28_RS03835 PF00795 Carbon-nitrogen hydrolase HRR28_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS03840 PF07730 Histidine kinase HRR28_RS03840 PF05384 Sensor protein DegS HRR28_RS03845 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS03845 PF00072 Response regulator receiver domain HRR28_RS03850 PF00166 Chaperonin 10 Kd subunit HRR28_RS03855 PF00118 TCP-1/cpn60 chaperonin family HRR28_RS03860 PF00156 Phosphoribosyl transferase domain HRR28_RS03865 PF00860 Permease family HRR28_RS03880 PF02554 Carbon starvation protein CstA HRR28_RS03880 PF13722 5TM C-terminal transporter carbon starvation CstA HRR28_RS03895 PF07690 Major Facilitator Superfamily HRR28_RS03910 PF04262 Glutamate-cysteine ligase HRR28_RS03910 PF08443 RimK-like ATP-grasp domain HRR28_RS03910 PF18419 ATP-grasp-like domain HRR28_RS03920 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRR28_RS03925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS03925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS03935 PF07859 alpha/beta hydrolase fold HRR28_RS03945 PF01176 Translation initiation factor 1A / IF-1 HRR28_RS03950 PF00444 Ribosomal protein L36 HRR28_RS03955 PF00416 Ribosomal protein S13/S18 HRR28_RS03960 PF00411 Ribosomal protein S11 HRR28_RS03965 PF01479 S4 domain HRR28_RS03965 PF00163 Ribosomal protein S4/S9 N-terminal domain HRR28_RS03970 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRR28_RS03970 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRR28_RS03970 PF01000 RNA polymerase Rpb3/RpoA insert domain HRR28_RS03975 PF01196 Ribosomal protein L17 HRR28_RS03985 PF02361 Cobalt transport protein HRR28_RS03995 PF06100 MCRA family HRR28_RS04000 PF00113 Enolase, C-terminal TIM barrel domain HRR28_RS04000 PF03952 Enolase, N-terminal domain HRR28_RS04015 PF00890 FAD binding domain HRR28_RS04015 PF04205 FMN-binding domain HRR28_RS04025 PF00664 ABC transporter transmembrane region HRR28_RS04025 PF00005 ABC transporter HRR28_RS04030 PF00994 Probable molybdopterin binding domain HRR28_RS04030 PF03454 MoeA C-terminal region (domain IV) HRR28_RS04030 PF03453 MoeA N-terminal region (domain I and II) HRR28_RS04035 PF00994 Probable molybdopterin binding domain HRR28_RS04040 PF00842 Alanine racemase, C-terminal domain HRR28_RS04040 PF01168 Alanine racemase, N-terminal domain HRR28_RS04045 PF03167 Uracil DNA glycosylase superfamily HRR28_RS04050 PF01544 CorA-like Mg2+ transporter protein HRR28_RS04055 PF08245 Mur ligase middle domain HRR28_RS04055 PF02875 Mur ligase family, glutamate ligase domain HRR28_RS04060 PF06965 Na+/H+ antiporter 1 HRR28_RS04065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRR28_RS04065 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HRR28_RS04070 PF00550 Phosphopantetheine attachment site HRR28_RS04075 PF02583 Metal-sensitive transcriptional repressor HRR28_RS04080 PF00403 Heavy-metal-associated domain HRR28_RS04090 PF12804 MobA-like NTP transferase domain HRR28_RS04090 PF00132 Bacterial transferase hexapeptide (six repeats) HRR28_RS04095 PF14572 Phosphoribosyl synthetase-associated domain HRR28_RS04095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRR28_RS04100 PF01195 Peptidyl-tRNA hydrolase HRR28_RS04105 PF07690 Major Facilitator Superfamily HRR28_RS04110 PF16326 ABC transporter C-terminal domain HRR28_RS04110 PF00005 ABC transporter HRR28_RS04110 PF12848 ABC transporter HRR28_RS04115 PF01205 Uncharacterized protein family UPF0029 HRR28_RS04115 PF09186 Domain of unknown function (DUF1949) HRR28_RS04120 PF01242 6-pyruvoyl tetrahydropterin synthase HRR28_RS04125 PF04055 Radical SAM superfamily HRR28_RS04130 PF06508 Queuosine biosynthesis protein QueC HRR28_RS04135 PF14489 QueF-like protein HRR28_RS04140 PF01368 DHH family HRR28_RS04140 PF17768 RecJ OB domain HRR28_RS04140 PF02272 DHHA1 domain HRR28_RS04140 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HRR28_RS04145 PF13291 ACT domain HRR28_RS04145 PF04607 Region found in RelA / SpoT proteins HRR28_RS04145 PF02824 TGS domain HRR28_RS04150 PF00753 Metallo-beta-lactamase superfamily HRR28_RS04155 PF01384 Phosphate transporter family HRR28_RS04165 PF03458 UPF0126 domain HRR28_RS04175 PF13840 ACT domain HRR28_RS04175 PF00696 Amino acid kinase family HRR28_RS04175 PF01842 ACT domain HRR28_RS04180 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRR28_RS04180 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRR28_RS04190 PF01479 S4 domain HRR28_RS04190 PF01728 FtsJ-like methyltransferase HRR28_RS04225 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRR28_RS04230 PF00580 UvrD/REP helicase N-terminal domain HRR28_RS04230 PF13361 UvrD-like helicase C-terminal domain HRR28_RS04235 PF03313 Serine dehydratase alpha chain HRR28_RS04240 PF02833 DHHA2 domain HRR28_RS04240 PF01368 DHH family HRR28_RS04245 PF01546 Peptidase family M20/M25/M40 HRR28_RS04245 PF07687 Peptidase dimerisation domain HRR28_RS04260 PF00890 FAD binding domain HRR28_RS04260 PF04205 FMN-binding domain HRR28_RS04270 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS04275 PF00164 Ribosomal protein S12/S23 HRR28_RS04280 PF00177 Ribosomal protein S7p/S5e HRR28_RS04285 PF00679 Elongation factor G C-terminus HRR28_RS04285 PF03764 Elongation factor G, domain IV HRR28_RS04285 PF03144 Elongation factor Tu domain 2 HRR28_RS04285 PF14492 Elongation Factor G, domain II HRR28_RS04285 PF00009 Elongation factor Tu GTP binding domain HRR28_RS04290 PF00338 Ribosomal protein S10p/S20e HRR28_RS04295 PF00297 Ribosomal protein L3 HRR28_RS04300 PF00573 Ribosomal protein L4/L1 family HRR28_RS04305 PF00276 Ribosomal protein L23 HRR28_RS04320 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS04320 PF00072 Response regulator receiver domain HRR28_RS04345 PF00005 ABC transporter HRR28_RS04355 PF00665 Integrase core domain HRR28_RS04355 PF01527 Transposase HRR28_RS04355 PF13333 Integrase core domain HRR28_RS04355 PF13276 HTH-like domain HRR28_RS04365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRR28_RS04365 PF05697 Bacterial trigger factor protein (TF) HRR28_RS04365 PF05698 Bacterial trigger factor protein (TF) C-terminus HRR28_RS04370 PF11842 Domain of unknown function (DUF3362) HRR28_RS04370 PF08497 Radical SAM N-terminal HRR28_RS04370 PF04055 Radical SAM superfamily HRR28_RS04380 PF00890 FAD binding domain HRR28_RS04380 PF14537 Cytochrome c3 HRR28_RS04385 PF13085 2Fe-2S iron-sulfur cluster binding domain HRR28_RS04385 PF13183 4Fe-4S dicluster domain HRR28_RS04400 PF13085 2Fe-2S iron-sulfur cluster binding domain HRR28_RS04400 PF13183 4Fe-4S dicluster domain HRR28_RS04425 PF00890 FAD binding domain HRR28_RS04425 PF04205 FMN-binding domain HRR28_RS04430 PF03947 Ribosomal Proteins L2, C-terminal domain HRR28_RS04430 PF00181 Ribosomal Proteins L2, RNA binding domain HRR28_RS04435 PF00203 Ribosomal protein S19 HRR28_RS04440 PF00237 Ribosomal protein L22p/L17e HRR28_RS04445 PF00189 Ribosomal protein S3, C-terminal domain HRR28_RS04445 PF07650 KH domain HRR28_RS04450 PF00252 Ribosomal protein L16p/L10e HRR28_RS04455 PF00831 Ribosomal L29 protein HRR28_RS04460 PF00366 Ribosomal protein S17 HRR28_RS04465 PF00238 Ribosomal protein L14p/L23e HRR28_RS04470 PF00467 KOW motif HRR28_RS04470 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRR28_RS04475 PF00281 Ribosomal protein L5 HRR28_RS04475 PF00673 ribosomal L5P family C-terminus HRR28_RS04480 PF00253 Ribosomal protein S14p/S29e HRR28_RS04485 PF00410 Ribosomal protein S8 HRR28_RS04490 PF00347 Ribosomal protein L6 HRR28_RS04495 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRR28_RS04500 PF03719 Ribosomal protein S5, C-terminal domain HRR28_RS04500 PF00333 Ribosomal protein S5, N-terminal domain HRR28_RS04505 PF00327 Ribosomal protein L30p/L7e HRR28_RS04510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRR28_RS04515 PF00344 SecY translocase HRR28_RS04520 PF05191 Adenylate kinase, active site lid HRR28_RS04530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRR28_RS04535 PF10371 Domain of unknown function HRR28_RS04535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HRR28_RS04535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HRR28_RS04535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRR28_RS04535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HRR28_RS04540 PF00384 Molybdopterin oxidoreductase HRR28_RS04540 PF18364 Molybdopterin oxidoreductase N-terminal domain HRR28_RS04540 PF01568 Molydopterin dinucleotide binding domain HRR28_RS04545 PF13247 4Fe-4S dicluster domain HRR28_RS04545 PF12800 4Fe-4S binding domain HRR28_RS04550 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS04555 PF00072 Response regulator receiver domain HRR28_RS04555 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS04565 PF01794 Ferric reductase like transmembrane component HRR28_RS04565 PF04205 FMN-binding domain HRR28_RS04570 PF01568 Molydopterin dinucleotide binding domain HRR28_RS04570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS04570 PF00384 Molybdopterin oxidoreductase HRR28_RS04575 PF12800 4Fe-4S binding domain HRR28_RS04575 PF13247 4Fe-4S dicluster domain HRR28_RS04590 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS04600 PF00733 Asparagine synthase HRR28_RS04600 PF13537 Glutamine amidotransferase domain HRR28_RS04605 PF01177 Asp/Glu/Hydantoin racemase HRR28_RS04615 PF12897 Alanine-glyoxylate amino-transferase HRR28_RS04620 PF00474 Sodium:solute symporter family HRR28_RS04625 PF00258 Flavodoxin HRR28_RS04625 PF00753 Metallo-beta-lactamase superfamily HRR28_RS04630 PF00877 NlpC/P60 family HRR28_RS04630 PF01476 LysM domain HRR28_RS04630 PF08239 Bacterial SH3 domain HRR28_RS04650 PF03144 Elongation factor Tu domain 2 HRR28_RS04650 PF00009 Elongation factor Tu GTP binding domain HRR28_RS04650 PF03143 Elongation factor Tu C-terminal domain HRR28_RS04655 PF00471 Ribosomal protein L33 HRR28_RS04665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRR28_RS04670 PF00467 KOW motif HRR28_RS04670 PF02357 Transcription termination factor nusG HRR28_RS04675 PF00298 Ribosomal protein L11, RNA binding domain HRR28_RS04675 PF03946 Ribosomal protein L11, N-terminal domain HRR28_RS04680 PF00687 Ribosomal protein L1p/L10e family HRR28_RS04685 PF01513 ATP-NAD kinase HRR28_RS04690 PF03023 Lipid II flippase MurJ HRR28_RS04695 PF00557 Metallopeptidase family M24 HRR28_RS04700 PF06418 CTP synthase N-terminus HRR28_RS04700 PF00117 Glutamine amidotransferase class-I HRR28_RS04730 PF08903 Domain of unknown function (DUF1846) HRR28_RS04735 PF03458 UPF0126 domain HRR28_RS04740 PF17763 Glutaminase/Asparaginase C-terminal domain HRR28_RS04740 PF00710 Asparaginase, N-terminal HRR28_RS04745 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS04745 PF00589 Phage integrase family HRR28_RS04750 PF02381 MraZ protein, putative antitoxin-like HRR28_RS04755 PF01795 MraW methylase family HRR28_RS04765 PF00905 Penicillin binding protein transpeptidase domain HRR28_RS04765 PF03717 Penicillin-binding Protein dimerisation domain HRR28_RS04770 PF02875 Mur ligase family, glutamate ligase domain HRR28_RS04770 PF08245 Mur ligase middle domain HRR28_RS04770 PF01225 Mur ligase family, catalytic domain HRR28_RS04775 PF01225 Mur ligase family, catalytic domain HRR28_RS04775 PF02875 Mur ligase family, glutamate ligase domain HRR28_RS04775 PF08245 Mur ligase middle domain HRR28_RS04780 PF00953 Glycosyl transferase family 4 HRR28_RS04785 PF08245 Mur ligase middle domain HRR28_RS04785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRR28_RS04785 PF02875 Mur ligase family, glutamate ligase domain HRR28_RS04790 PF01098 Cell cycle protein HRR28_RS04795 PF03033 Glycosyltransferase family 28 N-terminal domain HRR28_RS04795 PF04101 Glycosyltransferase family 28 C-terminal domain HRR28_RS04800 PF08245 Mur ligase middle domain HRR28_RS04800 PF01225 Mur ligase family, catalytic domain HRR28_RS04800 PF02875 Mur ligase family, glutamate ligase domain HRR28_RS04805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRR28_RS04805 PF01565 FAD binding domain HRR28_RS04810 PF03799 Cell division protein FtsQ HRR28_RS04810 PF08478 POTRA domain, FtsQ-type HRR28_RS04815 PF12327 FtsZ family, C-terminal domain HRR28_RS04815 PF00091 Tubulin/FtsZ family, GTPase domain HRR28_RS04825 PF01168 Alanine racemase, N-terminal domain HRR28_RS04830 PF04472 Cell division protein SepF HRR28_RS04835 PF02325 YGGT family HRR28_RS04850 PF14537 Cytochrome c3 HRR28_RS04850 PF00890 FAD binding domain HRR28_RS04860 PF13247 4Fe-4S dicluster domain HRR28_RS04860 PF12800 4Fe-4S binding domain HRR28_RS04875 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HRR28_RS04875 PF04263 Thiamin pyrophosphokinase, catalytic domain HRR28_RS04880 PF01964 Radical SAM ThiC family HRR28_RS04885 PF02581 Thiamine monophosphate synthase HRR28_RS04890 PF00857 Isochorismatase family HRR28_RS04895 PF08543 Phosphomethylpyrimidine kinase HRR28_RS04915 PF01925 Sulfite exporter TauE/SafE HRR28_RS04920 PF12627 Probable RNA and SrmB- binding site of polymerase A HRR28_RS04920 PF13735 tRNA nucleotidyltransferase domain 2 putative HRR28_RS04920 PF01743 Poly A polymerase head domain HRR28_RS04945 PF01797 Transposase IS200 like HRR28_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS04960 PF17845 FbpC C-terminal regulatory nucleotide binding domain HRR28_RS04960 PF00005 ABC transporter HRR28_RS04970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS04970 PF00384 Molybdopterin oxidoreductase HRR28_RS04970 PF01568 Molydopterin dinucleotide binding domain HRR28_RS04975 PF13247 4Fe-4S dicluster domain HRR28_RS04975 PF00037 4Fe-4S binding domain HRR28_RS04985 PF04205 FMN-binding domain HRR28_RS04985 PF01794 Ferric reductase like transmembrane component HRR28_RS04995 PF06463 Molybdenum Cofactor Synthesis C HRR28_RS04995 PF04055 Radical SAM superfamily HRR28_RS05000 PF01967 MoaC family HRR28_RS05005 PF04205 FMN-binding domain HRR28_RS05005 PF03358 NADPH-dependent FMN reductase HRR28_RS05005 PF00890 FAD binding domain HRR28_RS05010 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS05010 PF17874 MalT-like TPR region HRR28_RS05020 PF00885 6,7-dimethyl-8-ribityllumazine synthase HRR28_RS05025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRR28_RS05025 PF00925 GTP cyclohydrolase II HRR28_RS05030 PF00677 Lumazine binding domain HRR28_RS05035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRR28_RS05035 PF01872 RibD C-terminal domain HRR28_RS05040 PF01709 Transcriptional regulator HRR28_RS05050 PF02075 Crossover junction endodeoxyribonuclease RuvC HRR28_RS05055 PF01330 RuvA N terminal domain HRR28_RS05055 PF07499 RuvA, C-terminal domain HRR28_RS05060 PF17864 RuvB AAA lid domain HRR28_RS05060 PF05491 RuvB C-terminal winged helix domain HRR28_RS05060 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRR28_RS05070 PF00313 'Cold-shock' DNA-binding domain HRR28_RS05075 PF01209 ubiE/COQ5 methyltransferase family HRR28_RS05080 PF02511 Thymidylate synthase complementing protein HRR28_RS05085 PF07136 Protein of unknown function (DUF1385) HRR28_RS05090 PF00005 ABC transporter HRR28_RS05095 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRR28_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS05110 PF07739 TipAS antibiotic-recognition domain HRR28_RS05110 PF13411 MerR HTH family regulatory protein HRR28_RS05145 PF01751 Toprim domain HRR28_RS05145 PF01131 DNA topoisomerase HRR28_RS05150 PF05683 Fumarase C-terminus HRR28_RS05150 PF05681 Fumarate hydratase (Fumerase) HRR28_RS05155 PF05681 Fumarate hydratase (Fumerase) HRR28_RS05160 PF00390 Malic enzyme, N-terminal domain HRR28_RS05160 PF03949 Malic enzyme, NAD binding domain HRR28_RS05165 PF02223 Thymidylate kinase HRR28_RS05170 PF09115 DNA polymerase III, delta subunit, C terminal HRR28_RS05175 PF04468 PSP1 C-terminal conserved region HRR28_RS05180 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HRR28_RS05180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRR28_RS05180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRR28_RS05185 PF02645 Uncharacterised protein, DegV family COG1307 HRR28_RS05200 PF02645 Uncharacterised protein, DegV family COG1307 HRR28_RS05220 PF00156 Phosphoribosyl transferase domain HRR28_RS05235 PF05343 M42 glutamyl aminopeptidase HRR28_RS05240 PF01668 SmpB protein HRR28_RS05250 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family HRR28_RS05265 PF01177 Asp/Glu/Hydantoin racemase HRR28_RS05270 PF01725 Ham1 family HRR28_RS05275 PF13411 MerR HTH family regulatory protein HRR28_RS05280 PF00731 AIR carboxylase HRR28_RS05285 PF01969 Protein of unknown function DUF111 HRR28_RS05290 PF01634 ATP phosphoribosyltransferase HRR28_RS05295 PF00815 Histidinol dehydrogenase HRR28_RS05300 PF00155 Aminotransferase class I and II HRR28_RS05305 PF00475 Imidazoleglycerol-phosphate dehydratase HRR28_RS05310 PF00117 Glutamine amidotransferase class-I HRR28_RS05315 PF00977 Histidine biosynthesis protein HRR28_RS05320 PF00977 Histidine biosynthesis protein HRR28_RS05345 PF01502 Phosphoribosyl-AMP cyclohydrolase HRR28_RS05350 PF00892 EamA-like transporter family HRR28_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS05355 PF03466 LysR substrate binding domain HRR28_RS05360 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRR28_RS05365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRR28_RS05365 PF07498 Rho termination factor, N-terminal domain HRR28_RS05365 PF07497 Rho termination factor, RNA-binding domain HRR28_RS05370 PF01343 Peptidase family S49 HRR28_RS05375 PF01588 Putative tRNA binding domain HRR28_RS05375 PF08264 Anticodon-binding domain of tRNA HRR28_RS05375 PF09334 tRNA synthetases class I (M) HRR28_RS05380 PF00318 Ribosomal protein S2 HRR28_RS05385 PF00889 Elongation factor TS HRR28_RS05390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRR28_RS05400 PF01521 Iron-sulphur cluster biosynthesis HRR28_RS05400 PF01106 NifU-like domain HRR28_RS05415 PF01790 Prolipoprotein diacylglyceryl transferase HRR28_RS05420 PF01880 Desulfoferrodoxin HRR28_RS05425 PF01197 Ribosomal protein L31 HRR28_RS05430 PF03951 Glutamine synthetase, beta-Grasp domain HRR28_RS05430 PF00120 Glutamine synthetase, catalytic domain HRR28_RS05435 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS05440 PF01367 5'-3' exonuclease, C-terminal SAM fold HRR28_RS05440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRR28_RS05440 PF00476 DNA polymerase family A HRR28_RS05445 PF00072 Response regulator receiver domain HRR28_RS05445 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS05455 PF03606 C4-dicarboxylate anaerobic carrier HRR28_RS05480 PF00829 Ribosomal prokaryotic L21 protein HRR28_RS05485 PF01016 Ribosomal L27 protein HRR28_RS05490 PF09269 Domain of unknown function (DUF1967) HRR28_RS05490 PF01018 GTP1/OBG HRR28_RS05490 PF01926 50S ribosome-binding GTPase HRR28_RS05495 PF01472 PUA domain HRR28_RS05495 PF00696 Amino acid kinase family HRR28_RS05500 PF00171 Aldehyde dehydrogenase family HRR28_RS05505 PF01467 Cytidylyltransferase-like HRR28_RS05510 PF01467 Cytidylyltransferase-like HRR28_RS05510 PF01966 HD domain HRR28_RS05525 PF01654 Cytochrome bd terminal oxidase subunit I HRR28_RS05530 PF02322 Cytochrome bd terminal oxidase subunit II HRR28_RS05540 PF07516 SecA Wing and Scaffold domain HRR28_RS05540 PF02810 SEC-C motif HRR28_RS05540 PF07517 SecA DEAD-like domain HRR28_RS05540 PF01043 SecA preprotein cross-linking domain HRR28_RS05545 PF00472 RF-1 domain HRR28_RS05545 PF03462 PCRF domain HRR28_RS05550 PF02780 Transketolase, C-terminal domain HRR28_RS05550 PF00456 Transketolase, thiamine diphosphate binding domain HRR28_RS05550 PF02779 Transketolase, pyrimidine binding domain HRR28_RS05555 PF02780 Transketolase, C-terminal domain HRR28_RS05555 PF02779 Transketolase, pyrimidine binding domain HRR28_RS05560 PF00005 ABC transporter HRR28_RS05565 PF02687 FtsX-like permease family HRR28_RS05565 PF18075 FtsX extracellular domain HRR28_RS05575 PF00773 RNB domain HRR28_RS05575 PF00575 S1 RNA binding domain HRR28_RS05575 PF17876 Cold shock domain HRR28_RS05575 PF08206 Ribonuclease B OB domain HRR28_RS05590 PF01145 SPFH domain / Band 7 family HRR28_RS05595 PF01568 Molydopterin dinucleotide binding domain HRR28_RS05595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS05595 PF00384 Molybdopterin oxidoreductase HRR28_RS05600 PF12800 4Fe-4S binding domain HRR28_RS05600 PF13247 4Fe-4S dicluster domain HRR28_RS05610 PF00209 Sodium:neurotransmitter symporter family HRR28_RS05620 PF02978 Signal peptide binding domain HRR28_RS05620 PF02881 SRP54-type protein, helical bundle domain HRR28_RS05620 PF00448 SRP54-type protein, GTPase domain HRR28_RS05625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRR28_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS05635 PF12911 N-terminal TM domain of oligopeptide transport permease C HRR28_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component HRR28_RS05640 PF00005 ABC transporter HRR28_RS05645 PF00005 ABC transporter HRR28_RS05645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRR28_RS05650 PF00886 Ribosomal protein S16 HRR28_RS05665 PF01746 tRNA (Guanine-1)-methyltransferase HRR28_RS05670 PF10502 Signal peptidase, peptidase S26 HRR28_RS05680 PF02092 Glycyl-tRNA synthetase beta subunit HRR28_RS05680 PF05746 DALR anticodon binding domain HRR28_RS05685 PF03618 Kinase/pyrophosphorylase HRR28_RS05695 PF00391 PEP-utilising enzyme, mobile domain HRR28_RS05695 PF02896 PEP-utilising enzyme, TIM barrel domain HRR28_RS05695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRR28_RS05700 PF01008 Initiation factor 2 subunit family HRR28_RS05705 PF13614 AAA domain HRR28_RS05720 PF03591 AzlC protein HRR28_RS05730 PF00005 ABC transporter HRR28_RS05730 PF00664 ABC transporter transmembrane region HRR28_RS05735 PF00005 ABC transporter HRR28_RS05735 PF00664 ABC transporter transmembrane region HRR28_RS05750 PF10576 Iron-sulfur binding domain of endonuclease III HRR28_RS05750 PF00633 Helix-hairpin-helix motif HRR28_RS05750 PF00730 HhH-GPD superfamily base excision DNA repair protein HRR28_RS05750 PF14815 NUDIX domain HRR28_RS05755 PF02659 Putative manganese efflux pump HRR28_RS05765 PF00800 Prephenate dehydratase HRR28_RS05765 PF01842 ACT domain HRR28_RS05770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRR28_RS05770 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HRR28_RS05775 PF00374 Nickel-dependent hydrogenase HRR28_RS05785 PF01061 ABC-2 type transporter HRR28_RS05790 PF01061 ABC-2 type transporter HRR28_RS05815 PF00633 Helix-hairpin-helix motif HRR28_RS05815 PF00730 HhH-GPD superfamily base excision DNA repair protein HRR28_RS05820 PF00271 Helicase conserved C-terminal domain HRR28_RS05820 PF03461 TRCF domain HRR28_RS05820 PF17757 UvrB interaction domain HRR28_RS05820 PF00270 DEAD/DEAH box helicase HRR28_RS05820 PF02559 CarD-like/TRCF domain HRR28_RS05845 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRR28_RS05860 PF02772 S-adenosylmethionine synthetase, central domain HRR28_RS05860 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRR28_RS05860 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRR28_RS05880 PF04073 Aminoacyl-tRNA editing domain HRR28_RS05885 PF04851 Type III restriction enzyme, res subunit HRR28_RS05885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HRR28_RS05885 PF17764 3′ DNA-binding domain (3′BD) HRR28_RS05885 PF00271 Helicase conserved C-terminal domain HRR28_RS05885 PF18074 Primosomal protein N C-terminal domain HRR28_RS05895 PF00069 Protein kinase domain HRR28_RS05940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS05940 PF00384 Molybdopterin oxidoreductase HRR28_RS05940 PF01568 Molydopterin dinucleotide binding domain HRR28_RS05945 PF12800 4Fe-4S binding domain HRR28_RS05945 PF13247 4Fe-4S dicluster domain HRR28_RS05950 PF00072 Response regulator receiver domain HRR28_RS05950 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS05950 PF09308 LuxQ, periplasmic HRR28_RS05955 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS05955 PF00072 Response regulator receiver domain HRR28_RS05960 PF04545 Sigma-70, region 4 HRR28_RS05960 PF04539 Sigma-70 region 3 HRR28_RS05960 PF04542 Sigma-70 region 2 HRR28_RS05960 PF00140 Sigma-70 factor, region 1.2 HRR28_RS05965 PF10672 S-adenosylmethionine-dependent methyltransferase HRR28_RS05965 PF01170 Putative RNA methylase family UPF0020 HRR28_RS05965 PF02926 THUMP domain HRR28_RS05980 PF00375 Sodium:dicarboxylate symporter family HRR28_RS05995 PF07969 Amidohydrolase family HRR28_RS06015 PF05698 Bacterial trigger factor protein (TF) C-terminus HRR28_RS06015 PF05697 Bacterial trigger factor protein (TF) HRR28_RS06015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRR28_RS06020 PF00574 Clp protease HRR28_RS06025 PF10431 C-terminal, D2-small domain, of ClpB protein HRR28_RS06025 PF07724 AAA domain (Cdc48 subfamily) HRR28_RS06025 PF06689 ClpX C4-type zinc finger HRR28_RS06030 PF10458 Valyl tRNA synthetase tRNA binding arm HRR28_RS06030 PF00133 tRNA synthetases class I (I, L, M and V) HRR28_RS06030 PF08264 Anticodon-binding domain of tRNA HRR28_RS06040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRR28_RS06040 PF02824 TGS domain HRR28_RS06040 PF03129 Anticodon binding domain HRR28_RS06040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRR28_RS06050 PF00474 Sodium:solute symporter family HRR28_RS06055 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS06060 PF00085 Thioredoxin HRR28_RS06065 PF00999 Sodium/hydrogen exchanger family HRR28_RS06065 PF02080 TrkA-C domain HRR28_RS06065 PF02254 TrkA-N domain HRR28_RS06070 PF00472 RF-1 domain HRR28_RS06070 PF03462 PCRF domain HRR28_RS06075 PF17827 PrmC N-terminal domain HRR28_RS06075 PF05175 Methyltransferase small domain HRR28_RS06080 PF01048 Phosphorylase superfamily HRR28_RS06095 PF00920 Dehydratase family HRR28_RS06100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRR28_RS06100 PF00205 Thiamine pyrophosphate enzyme, central domain HRR28_RS06100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRR28_RS06105 PF10369 Small subunit of acetolactate synthase HRR28_RS06110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRR28_RS06110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRR28_RS06115 PF02416 mttA/Hcf106 family HRR28_RS06125 PF00075 RNase H HRR28_RS06140 PF01966 HD domain HRR28_RS06140 PF13286 Phosphohydrolase-associated domain HRR28_RS06145 PF10410 DnaB-helicase binding domain of primase HRR28_RS06145 PF08278 DNA primase DnaG DnaB-binding HRR28_RS06145 PF13662 Toprim domain HRR28_RS06145 PF08275 DNA primase catalytic core, N-terminal domain HRR28_RS06145 PF01807 CHC2 zinc finger HRR28_RS06150 PF01327 Polypeptide deformylase HRR28_RS06155 PF00551 Formyl transferase HRR28_RS06155 PF02911 Formyl transferase, C-terminal domain HRR28_RS06160 PF01189 16S rRNA methyltransferase RsmB/F HRR28_RS06160 PF01029 NusB family HRR28_RS06170 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS06170 PF00501 AMP-binding enzyme HRR28_RS06185 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HRR28_RS06185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HRR28_RS06185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HRR28_RS06205 PF00501 AMP-binding enzyme HRR28_RS06205 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS06215 PF02915 Rubrerythrin HRR28_RS06220 PF00156 Phosphoribosyl transferase domain HRR28_RS06225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS06225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS06230 PF01979 Amidohydrolase family HRR28_RS06235 PF01497 Periplasmic binding protein HRR28_RS06240 PF01032 FecCD transport family HRR28_RS06245 PF01032 FecCD transport family HRR28_RS06250 PF00005 ABC transporter HRR28_RS06280 PF09820 Predicted AAA-ATPase HRR28_RS06280 PF08011 PD-(D/E)XK nuclease superfamily HRR28_RS06285 PF00117 Glutamine amidotransferase class-I HRR28_RS06285 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HRR28_RS06290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRR28_RS06290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRR28_RS06290 PF02142 MGS-like domain HRR28_RS06295 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HRR28_RS06295 PF00175 Oxidoreductase NAD-binding domain HRR28_RS06300 PF01180 Dihydroorotate dehydrogenase HRR28_RS06305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRR28_RS06315 PF00625 Guanylate kinase HRR28_RS06325 PF02568 Thiamine biosynthesis protein (ThiI) HRR28_RS06325 PF02926 THUMP domain HRR28_RS06330 PF10531 SLBB domain HRR28_RS06335 PF13567 Domain of unknown function (DUF4131) HRR28_RS06335 PF03772 Competence protein HRR28_RS06335 PF00753 Metallo-beta-lactamase superfamily HRR28_RS06345 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRR28_RS06345 PF00753 Metallo-beta-lactamase superfamily HRR28_RS06350 PF01649 Ribosomal protein S20 HRR28_RS06355 PF00679 Elongation factor G C-terminus HRR28_RS06355 PF00009 Elongation factor Tu GTP binding domain HRR28_RS06355 PF03144 Elongation factor Tu domain 2 HRR28_RS06355 PF06421 GTP-binding protein LepA C-terminus HRR28_RS06370 PF01207 Dihydrouridine synthase (Dus) HRR28_RS06375 PF04055 Radical SAM superfamily HRR28_RS06375 PF06969 HemN C-terminal domain HRR28_RS06380 PF08220 DeoR-like helix-turn-helix domain HRR28_RS06380 PF01628 HrcA protein C terminal domain HRR28_RS06385 PF00684 DnaJ central domain HRR28_RS06385 PF01556 DnaJ C terminal domain HRR28_RS06385 PF00226 DnaJ domain HRR28_RS06390 PF04452 RNA methyltransferase HRR28_RS06395 PF01938 TRAM domain HRR28_RS06395 PF04055 Radical SAM superfamily HRR28_RS06395 PF00919 Uncharacterized protein family UPF0004 HRR28_RS06400 PF02562 PhoH-like protein HRR28_RS06405 PF02130 Uncharacterized protein family UPF0054 HRR28_RS06410 PF01219 Prokaryotic diacylglycerol kinase HRR28_RS06415 PF07650 KH domain HRR28_RS06415 PF01926 50S ribosome-binding GTPase HRR28_RS06425 PF02565 Recombination protein O C terminal HRR28_RS06425 PF11967 Recombination protein O N terminal HRR28_RS06430 PF00312 Ribosomal protein S15 HRR28_RS06435 PF00575 S1 RNA binding domain HRR28_RS06435 PF03725 3' exoribonuclease family, domain 2 HRR28_RS06435 PF01138 3' exoribonuclease family, domain 1 HRR28_RS06435 PF00013 KH domain HRR28_RS06435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRR28_RS06440 PF01113 Dihydrodipicolinate reductase, N-terminus HRR28_RS06440 PF05173 Dihydrodipicolinate reductase, C-terminus HRR28_RS06445 PF00701 Dihydrodipicolinate synthetase family HRR28_RS06450 PF17770 Ribonuclease J C-terminal domain HRR28_RS06450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HRR28_RS06450 PF00753 Metallo-beta-lactamase superfamily HRR28_RS06455 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HRR28_RS06455 PF01580 FtsK/SpoIIIE family HRR28_RS06455 PF09397 Ftsk gamma domain HRR28_RS06455 PF17854 FtsK alpha domain HRR28_RS06465 PF04461 Protein of unknown function (DUF520) HRR28_RS06470 PF04055 Radical SAM superfamily HRR28_RS06470 PF18693 TRAM domain HRR28_RS06470 PF00919 Uncharacterized protein family UPF0004 HRR28_RS06475 PF01066 CDP-alcohol phosphatidyltransferase HRR28_RS06480 PF00154 recA bacterial DNA recombination protein HRR28_RS06490 PF12072 Domain of unknown function (DUF3552) HRR28_RS06490 PF00013 KH domain HRR28_RS06490 PF01966 HD domain HRR28_RS06495 PF01119 DNA mismatch repair protein, C-terminal domain HRR28_RS06495 PF08676 MutL C terminal dimerisation domain HRR28_RS06500 PF04232 Stage V sporulation protein S (SpoVS) HRR28_RS06505 PF01938 TRAM domain HRR28_RS06505 PF00919 Uncharacterized protein family UPF0004 HRR28_RS06505 PF04055 Radical SAM superfamily HRR28_RS06515 PF01678 Diaminopimelate epimerase HRR28_RS06520 PF16360 GTP-binding GTPase Middle Region HRR28_RS06520 PF13167 GTP-binding GTPase N-terminal HRR28_RS06520 PF01926 50S ribosome-binding GTPase HRR28_RS06525 PF00717 Peptidase S24-like HRR28_RS06525 PF01726 LexA DNA binding domain HRR28_RS06530 PF03477 ATP cone domain HRR28_RS06535 PF00692 dUTPase HRR28_RS06570 PF00665 Integrase core domain HRR28_RS06575 PF01695 IstB-like ATP binding protein HRR28_RS06630 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRR28_RS06635 PF14535 AMP-binding enzyme C-terminal domain HRR28_RS06635 PF00501 AMP-binding enzyme HRR28_RS06660 PF07943 Penicillin-binding protein 5, C-terminal domain HRR28_RS06660 PF00768 D-alanyl-D-alanine carboxypeptidase HRR28_RS06670 PF00501 AMP-binding enzyme HRR28_RS06670 PF14535 AMP-binding enzyme C-terminal domain HRR28_RS06675 PF04294 VanW like protein HRR28_RS06680 PF01066 CDP-alcohol phosphatidyltransferase HRR28_RS06685 PF12838 4Fe-4S dicluster domain HRR28_RS06690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HRR28_RS06690 PF00374 Nickel-dependent hydrogenase HRR28_RS06700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRR28_RS06710 PF05525 Branched-chain amino acid transport protein HRR28_RS06725 PF04205 FMN-binding domain HRR28_RS06725 PF03358 NADPH-dependent FMN reductase HRR28_RS06725 PF00890 FAD binding domain HRR28_RS06730 PF00072 Response regulator receiver domain HRR28_RS06730 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS06735 PF06969 HemN C-terminal domain HRR28_RS06735 PF04055 Radical SAM superfamily HRR28_RS06750 PF14537 Cytochrome c3 HRR28_RS06750 PF00890 FAD binding domain HRR28_RS06755 PF00762 Ferrochelatase HRR28_RS06760 PF00849 RNA pseudouridylate synthase HRR28_RS06760 PF01479 S4 domain HRR28_RS06765 PF01252 Signal peptidase (SPase) II HRR28_RS06770 PF06827 Zinc finger found in FPG and IleRS HRR28_RS06770 PF00133 tRNA synthetases class I (I, L, M and V) HRR28_RS06770 PF08264 Anticodon-binding domain of tRNA HRR28_RS06775 PF02645 Uncharacterised protein, DegV family COG1307 HRR28_RS06780 PF00817 impB/mucB/samB family HRR28_RS06780 PF11798 IMS family HHH motif HRR28_RS06780 PF11799 impB/mucB/samB family C-terminal domain HRR28_RS06785 PF03309 Type III pantothenate kinase HRR28_RS06790 PF00535 Glycosyl transferase family 2 HRR28_RS06795 PF03275 UDP-galactopyranose mutase HRR28_RS06800 PF01515 Phosphate acetyl/butaryl transferase HRR28_RS06805 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS06815 PF04205 FMN-binding domain HRR28_RS06815 PF00890 FAD binding domain HRR28_RS06820 PF00871 Acetokinase family HRR28_RS06825 PF02609 Exonuclease VII small subunit HRR28_RS06830 PF13742 OB-fold nucleic acid binding domain HRR28_RS06830 PF02601 Exonuclease VII, large subunit HRR28_RS06835 PF04298 Putative neutral zinc metallopeptidase HRR28_RS06840 PF00570 HRDC domain HRR28_RS06840 PF01612 3'-5' exonuclease HRR28_RS06845 PF00781 Diacylglycerol kinase catalytic domain HRR28_RS06850 PF13520 Amino acid permease HRR28_RS06885 PF00589 Phage integrase family HRR28_RS06885 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS06915 PF03741 Integral membrane protein TerC family HRR28_RS06925 PF16916 Dimerisation domain of Zinc Transporter HRR28_RS06925 PF01545 Cation efflux family HRR28_RS06935 PF03840 Preprotein translocase SecG subunit HRR28_RS06940 PF01676 Metalloenzyme superfamily HRR28_RS06940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HRR28_RS06945 PF00121 Triosephosphate isomerase HRR28_RS06950 PF00162 Phosphoglycerate kinase HRR28_RS06955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRR28_RS06955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRR28_RS06960 PF10298 WhiA N-terminal LAGLIDADG-like domain HRR28_RS06960 PF02650 WhiA C-terminal HTH domain HRR28_RS06960 PF14527 WhiA LAGLIDADG-like domain HRR28_RS06965 PF01933 Uncharacterised protein family UPF0052 HRR28_RS06970 PF03668 P-loop ATPase protein family HRR28_RS06975 PF08459 UvrC Helix-hairpin-helix N-terminal HRR28_RS06975 PF01541 GIY-YIG catalytic domain HRR28_RS06975 PF02151 UvrB/uvrC motif HRR28_RS06985 PF01687 Riboflavin kinase HRR28_RS06985 PF06574 FAD synthetase HRR28_RS06990 PF16198 tRNA pseudouridylate synthase B C-terminal domain HRR28_RS06990 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRR28_RS06995 PF02272 DHHA1 domain HRR28_RS06995 PF01368 DHH family HRR28_RS07000 PF02033 Ribosome-binding factor A HRR28_RS07005 PF11987 Translation-initiation factor 2 HRR28_RS07005 PF11987 Translation-initiation factor 2 HRR28_RS07005 PF00009 Elongation factor Tu GTP binding domain HRR28_RS07005 PF04760 Translation initiation factor IF-2, N-terminal region HRR28_RS07005 PF04760 Translation initiation factor IF-2, N-terminal region HRR28_RS07005 PF00009 Elongation factor Tu GTP binding domain HRR28_RS07015 PF08529 NusA N-terminal domain HRR28_RS07015 PF00575 S1 RNA binding domain HRR28_RS07015 PF13184 NusA-like KH domain HRR28_RS07020 PF17384 RimP C-terminal SH3 domain HRR28_RS07020 PF02576 RimP N-terminal domain HRR28_RS07025 PF03466 LysR substrate binding domain HRR28_RS07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS07035 PF01797 Transposase IS200 like HRR28_RS07040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS07040 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS07040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS07045 PF02515 CoA-transferase family III HRR28_RS07050 PF00890 FAD binding domain HRR28_RS07050 PF04205 FMN-binding domain HRR28_RS07055 PF00378 Enoyl-CoA hydratase/isomerase HRR28_RS07060 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS07060 PF00501 AMP-binding enzyme HRR28_RS07065 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS07065 PF00501 AMP-binding enzyme HRR28_RS07070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS07070 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS07070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS07085 PF13183 4Fe-4S dicluster domain HRR28_RS07085 PF02665 Nitrate reductase gamma subunit HRR28_RS07085 PF02754 Cysteine-rich domain HRR28_RS07090 PF00766 Electron transfer flavoprotein FAD-binding domain HRR28_RS07090 PF01012 Electron transfer flavoprotein domain HRR28_RS07095 PF01012 Electron transfer flavoprotein domain HRR28_RS07100 PF01467 Cytidylyltransferase-like HRR28_RS07115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS07115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS07115 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS07120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRR28_RS07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS07130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS07130 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS07130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS07135 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS07135 PF00501 AMP-binding enzyme HRR28_RS07145 PF08502 LeuA allosteric (dimerisation) domain HRR28_RS07145 PF00682 HMGL-like HRR28_RS07150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRR28_RS07150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRR28_RS07150 PF01842 ACT domain HRR28_RS07155 PF00266 Aminotransferase class-V HRR28_RS07175 PF12705 PD-(D/E)XK nuclease superfamily HRR28_RS07175 PF00580 UvrD/REP helicase N-terminal domain HRR28_RS07175 PF13361 UvrD-like helicase C-terminal domain HRR28_RS07215 PF11799 impB/mucB/samB family C-terminal domain HRR28_RS07215 PF11798 IMS family HHH motif HRR28_RS07215 PF00817 impB/mucB/samB family HRR28_RS07225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRR28_RS07225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRR28_RS07235 PF17755 UvrA DNA-binding domain HRR28_RS07235 PF17760 UvrA interaction domain HRR28_RS07245 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS07245 PF00589 Phage integrase family HRR28_RS07250 PF01134 Glucose inhibited division protein A HRR28_RS07255 PF17782 DprA winged helix domain HRR28_RS07255 PF02481 DNA recombination-mediator protein A HRR28_RS07260 PF01078 Magnesium chelatase, subunit ChlI HRR28_RS07260 PF13335 Magnesium chelatase, subunit ChlI C-terminal HRR28_RS07265 PF02021 Uncharacterised protein family UPF0102 HRR28_RS07270 PF01351 Ribonuclease HII HRR28_RS07275 PF01245 Ribosomal protein L19 HRR28_RS07280 PF01145 SPFH domain / Band 7 family HRR28_RS07290 PF09297 NADH pyrophosphatase zinc ribbon domain HRR28_RS07290 PF00293 NUDIX domain HRR28_RS07290 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HRR28_RS07295 PF03063 Prismane/CO dehydrogenase family HRR28_RS07305 PF00291 Pyridoxal-phosphate dependent enzyme HRR28_RS07320 PF01230 HIT domain HRR28_RS07340 PF01098 Cell cycle protein HRR28_RS07345 PF03717 Penicillin-binding Protein dimerisation domain HRR28_RS07345 PF00905 Penicillin binding protein transpeptidase domain HRR28_RS07355 PF04085 rod shape-determining protein MreC HRR28_RS07365 PF03358 NADPH-dependent FMN reductase HRR28_RS07365 PF04205 FMN-binding domain HRR28_RS07365 PF00890 FAD binding domain HRR28_RS07380 PF00374 Nickel-dependent hydrogenase HRR28_RS07390 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HRR28_RS07390 PF00175 Oxidoreductase NAD-binding domain HRR28_RS07400 PF00334 Nucleoside diphosphate kinase HRR28_RS07410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRR28_RS07415 PF05958 tRNA (Uracil-5-)-methyltransferase HRR28_RS07415 PF01938 TRAM domain HRR28_RS07425 PF00781 Diacylglycerol kinase catalytic domain HRR28_RS07440 PF00535 Glycosyl transferase family 2 HRR28_RS07445 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HRR28_RS07445 PF04101 Glycosyltransferase family 28 C-terminal domain HRR28_RS07450 PF00271 Helicase conserved C-terminal domain HRR28_RS07450 PF00270 DEAD/DEAH box helicase HRR28_RS07460 PF00453 Ribosomal protein L20 HRR28_RS07465 PF01632 Ribosomal protein L35 HRR28_RS07470 PF00707 Translation initiation factor IF-3, C-terminal domain HRR28_RS07470 PF05198 Translation initiation factor IF-3, N-terminal domain HRR28_RS07485 PF05193 Peptidase M16 inactive domain HRR28_RS07485 PF00675 Insulinase (Peptidase family M16) HRR28_RS07485 PF08367 Peptidase M16C associated HRR28_RS07490 PF03459 TOBE domain HRR28_RS07490 PF00005 ABC transporter HRR28_RS07515 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HRR28_RS07515 PF05221 S-adenosyl-L-homocysteine hydrolase HRR28_RS07520 PF01906 Putative heavy-metal-binding HRR28_RS07525 PF08241 Methyltransferase domain HRR28_RS07530 PF13784 Fic/DOC family N-terminal HRR28_RS07530 PF02661 Fic/DOC family HRR28_RS07535 PF13247 4Fe-4S dicluster domain HRR28_RS07555 PF01906 Putative heavy-metal-binding HRR28_RS07560 PF02613 Nitrate reductase delta subunit HRR28_RS07565 PF13247 4Fe-4S dicluster domain HRR28_RS07570 PF01568 Molydopterin dinucleotide binding domain HRR28_RS07570 PF00384 Molybdopterin oxidoreductase HRR28_RS07570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS07595 PF06470 SMC proteins Flexible Hinge Domain HRR28_RS07595 PF02463 RecF/RecN/SMC N terminal domain HRR28_RS07600 PF00035 Double-stranded RNA binding motif HRR28_RS07600 PF14622 Ribonuclease-III-like HRR28_RS07605 PF02504 Fatty acid synthesis protein HRR28_RS07610 PF01783 Ribosomal L32p protein family HRR28_RS07615 PF00654 Voltage gated chloride channel HRR28_RS07635 PF00271 Helicase conserved C-terminal domain HRR28_RS07635 PF00270 DEAD/DEAH box helicase HRR28_RS07635 PF17191 RecG wedge domain HRR28_RS07640 PF13684 Dihydroxyacetone kinase family HRR28_RS07640 PF02734 DAK2 domain HRR28_RS07645 PF03780 Asp23 family, cell envelope-related function HRR28_RS07650 PF00830 Ribosomal L28 family HRR28_RS07670 PF00266 Aminotransferase class-V HRR28_RS07675 PF00834 Ribulose-phosphate 3 epimerase family HRR28_RS07680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRR28_RS07680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRR28_RS07690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRR28_RS07690 PF01627 Hpt domain HRR28_RS07690 PF00672 HAMP domain HRR28_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS07690 PF00072 Response regulator receiver domain HRR28_RS07690 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS07695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HRR28_RS07695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HRR28_RS07700 PF02660 Glycerol-3-phosphate acyltransferase HRR28_RS07705 PF01926 50S ribosome-binding GTPase HRR28_RS07705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRR28_RS07715 PF02401 LytB protein HRR28_RS07720 PF01553 Acyltransferase HRR28_RS07725 PF02224 Cytidylate kinase HRR28_RS07730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRR28_RS07735 PF02153 Prephenate dehydrogenase HRR28_RS07820 PF00072 Response regulator receiver domain HRR28_RS07820 PF09308 LuxQ, periplasmic HRR28_RS07820 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS07825 PF02558 Ketopantoate reductase PanE/ApbA HRR28_RS07825 PF08546 Ketopantoate reductase PanE/ApbA C terminal HRR28_RS07830 PF02261 Aspartate decarboxylase HRR28_RS07835 PF02569 Pantoate-beta-alanine ligase HRR28_RS07840 PF02548 Ketopantoate hydroxymethyltransferase HRR28_RS07845 PF00849 RNA pseudouridylate synthase HRR28_RS07845 PF01479 S4 domain HRR28_RS07855 PF02616 Segregation and condensation protein ScpA HRR28_RS07860 PF02163 Peptidase family M50 HRR28_RS07865 PF00999 Sodium/hydrogen exchanger family HRR28_RS07870 PF00588 SpoU rRNA Methylase family HRR28_RS07875 PF12848 ABC transporter HRR28_RS07875 PF00005 ABC transporter HRR28_RS07875 PF16326 ABC transporter C-terminal domain HRR28_RS07880 PF00293 NUDIX domain HRR28_RS07895 PF00579 tRNA synthetases class I (W and Y) HRR28_RS07900 PF00999 Sodium/hydrogen exchanger family HRR28_RS07920 PF00899 ThiF family HRR28_RS07935 PF00750 tRNA synthetases class I (R) HRR28_RS07935 PF03485 Arginyl tRNA synthetase N terminal domain HRR28_RS07935 PF05746 DALR anticodon binding domain HRR28_RS07940 PF03606 C4-dicarboxylate anaerobic carrier HRR28_RS07945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS07945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS07975 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS07980 PF00682 HMGL-like HRR28_RS07980 PF08502 LeuA allosteric (dimerisation) domain HRR28_RS08005 PF02335 Cytochrome c552 HRR28_RS08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS08010 PF00989 PAS fold HRR28_RS08010 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS08015 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS08015 PF00072 Response regulator receiver domain HRR28_RS08020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRR28_RS08025 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HRR28_RS08025 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HRR28_RS08035 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HRR28_RS08045 PF14535 AMP-binding enzyme C-terminal domain HRR28_RS08045 PF00501 AMP-binding enzyme HRR28_RS08055 PF00696 Amino acid kinase family HRR28_RS08070 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRR28_RS08075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS08075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS08085 PF02637 GatB domain HRR28_RS08085 PF02934 GatB/GatE catalytic domain HRR28_RS08090 PF01425 Amidase HRR28_RS08095 PF02686 Glu-tRNAGln amidotransferase C subunit HRR28_RS08110 PF07690 Major Facilitator Superfamily HRR28_RS08115 PF06071 Protein of unknown function (DUF933) HRR28_RS08115 PF01926 50S ribosome-binding GTPase HRR28_RS08120 PF00209 Sodium:neurotransmitter symporter family HRR28_RS08125 PF13375 RnfC Barrel sandwich hybrid domain HRR28_RS08125 PF12838 4Fe-4S dicluster domain HRR28_RS08125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRR28_RS08130 PF01416 tRNA pseudouridine synthase HRR28_RS08135 PF02811 PHP domain HRR28_RS08135 PF14579 Helix-hairpin-helix motif HRR28_RS08135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRR28_RS08135 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRR28_RS08155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HRR28_RS08160 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRR28_RS08160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRR28_RS08165 PF00231 ATP synthase HRR28_RS08170 PF00306 ATP synthase alpha/beta chain, C terminal domain HRR28_RS08170 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRR28_RS08170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRR28_RS08175 PF00213 ATP synthase delta (OSCP) subunit HRR28_RS08180 PF00430 ATP synthase B/B' CF(0) HRR28_RS08185 PF00137 ATP synthase subunit C HRR28_RS08190 PF00119 ATP synthase A chain HRR28_RS08200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRR28_RS08210 PF00464 Serine hydroxymethyltransferase HRR28_RS08215 PF02502 Ribose/Galactose Isomerase HRR28_RS08220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRR28_RS08220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRR28_RS08225 PF07728 AAA domain (dynein-related subfamily) HRR28_RS08225 PF12102 Domain of unknown function (DUF3578) HRR28_RS08240 PF12146 Serine aminopeptidase, S33 HRR28_RS08245 PF01300 Telomere recombination HRR28_RS08260 PF01235 Sodium:alanine symporter family HRR28_RS08265 PF01235 Sodium:alanine symporter family HRR28_RS08275 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS08275 PF00072 Response regulator receiver domain HRR28_RS08295 PF01494 FAD binding domain HRR28_RS08300 PF01012 Electron transfer flavoprotein domain HRR28_RS08300 PF00766 Electron transfer flavoprotein FAD-binding domain HRR28_RS08305 PF01012 Electron transfer flavoprotein domain HRR28_RS08315 PF02515 CoA-transferase family III HRR28_RS08320 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS08320 PF00501 AMP-binding enzyme HRR28_RS08325 PF00378 Enoyl-CoA hydratase/isomerase HRR28_RS08330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRR28_RS08330 PF02770 Acyl-CoA dehydrogenase, middle domain HRR28_RS08330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRR28_RS08340 PF02361 Cobalt transport protein HRR28_RS08345 PF00005 ABC transporter HRR28_RS08350 PF00005 ABC transporter HRR28_RS08360 PF00005 ABC transporter HRR28_RS08365 PF01032 FecCD transport family HRR28_RS08375 PF04055 Radical SAM superfamily HRR28_RS08375 PF13186 Iron-sulfur cluster-binding domain HRR28_RS08380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HRR28_RS08380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HRR28_RS08380 PF01488 Shikimate / quinate 5-dehydrogenase HRR28_RS08390 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS08390 PF00072 Response regulator receiver domain HRR28_RS08400 PF07549 SecD/SecF GG Motif HRR28_RS08400 PF02355 Protein export membrane protein HRR28_RS08410 PF00072 Response regulator receiver domain HRR28_RS08410 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS08415 PF02910 Fumarate reductase flavoprotein C-term HRR28_RS08415 PF00890 FAD binding domain HRR28_RS08425 PF02547 Queuosine biosynthesis protein HRR28_RS08430 PF01702 Queuine tRNA-ribosyltransferase HRR28_RS08440 PF01613 Flavin reductase like domain HRR28_RS08440 PF00301 Rubredoxin HRR28_RS08450 PF01473 Putative cell wall binding repeat HRR28_RS08450 PF02324 Glycosyl hydrolase family 70 HRR28_RS08455 PF00082 Subtilase family HRR28_RS08460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRR28_RS08470 PF03734 L,D-transpeptidase catalytic domain HRR28_RS08475 PF05036 Sporulation related domain HRR28_RS08475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HRR28_RS08475 PF08239 Bacterial SH3 domain HRR28_RS08480 PF16363 GDP-mannose 4,6 dehydratase HRR28_RS08485 PF02843 Phosphoribosylglycinamide synthetase, C domain HRR28_RS08485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRR28_RS08485 PF02844 Phosphoribosylglycinamide synthetase, N domain HRR28_RS08500 PF00535 Glycosyl transferase family 2 HRR28_RS08505 PF16363 GDP-mannose 4,6 dehydratase HRR28_RS08520 PF00483 Nucleotidyl transferase HRR28_RS08540 PF03062 MBOAT, membrane-bound O-acyltransferase family HRR28_RS08545 PF00550 Phosphopantetheine attachment site HRR28_RS08550 PF03062 MBOAT, membrane-bound O-acyltransferase family HRR28_RS08555 PF00501 AMP-binding enzyme HRR28_RS08555 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS08570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HRR28_RS08570 PF00535 Glycosyl transferase family 2 HRR28_RS08580 PF00155 Aminotransferase class I and II HRR28_RS08585 PF01467 Cytidylyltransferase-like HRR28_RS08605 PF02397 Bacterial sugar transferase HRR28_RS08615 PF02397 Bacterial sugar transferase HRR28_RS08665 PF02350 UDP-N-acetylglucosamine 2-epimerase HRR28_RS08670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRR28_RS08670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRR28_RS08670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRR28_RS08690 PF00872 Transposase, Mutator family HRR28_RS08720 PF01695 IstB-like ATP binding protein HRR28_RS08725 PF00665 Integrase core domain HRR28_RS08745 PF00872 Transposase, Mutator family HRR28_RS08755 PF00535 Glycosyl transferase family 2 HRR28_RS08760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HRR28_RS08765 PF16912 Glucose dehydrogenase C-terminus HRR28_RS08765 PF08240 Alcohol dehydrogenase GroES-like domain HRR28_RS08770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRR28_RS08790 PF01381 Helix-turn-helix HRR28_RS08790 PF09856 Predicted transcriptional regulator (DUF2083) HRR28_RS08790 PF06114 IrrE N-terminal-like domain HRR28_RS08805 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HRR28_RS08810 PF08239 Bacterial SH3 domain HRR28_RS08810 PF00005 ABC transporter HRR28_RS08815 PF01061 ABC-2 type transporter HRR28_RS08825 PF05973 Phage derived protein Gp49-like (DUF891) HRR28_RS08835 PF00953 Glycosyl transferase family 4 HRR28_RS08840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HRR28_RS08840 PF05257 CHAP domain HRR28_RS08845 PF00877 NlpC/P60 family HRR28_RS08850 PF00533 BRCA1 C Terminus (BRCT) domain HRR28_RS08850 PF01653 NAD-dependent DNA ligase adenylation domain HRR28_RS08850 PF03120 NAD-dependent DNA ligase OB-fold domain HRR28_RS08850 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRR28_RS08850 PF12826 Helix-hairpin-helix motif HRR28_RS08860 PF03853 YjeF-related protein N-terminus HRR28_RS08860 PF01256 Carbohydrate kinase HRR28_RS08865 PF09308 LuxQ, periplasmic HRR28_RS08865 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS08865 PF00072 Response regulator receiver domain HRR28_RS08870 PF01380 SIS domain HRR28_RS08875 PF01648 4'-phosphopantetheinyl transferase superfamily HRR28_RS08880 PF03483 B3/4 domain HRR28_RS08880 PF03484 tRNA synthetase B5 domain HRR28_RS08880 PF03147 Ferredoxin-fold anticodon binding domain HRR28_RS08880 PF01588 Putative tRNA binding domain HRR28_RS08880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRR28_RS08885 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HRR28_RS08885 PF01409 tRNA synthetases class II core domain (F) HRR28_RS08905 PF02463 RecF/RecN/SMC N terminal domain HRR28_RS08910 PF01522 Polysaccharide deacetylase HRR28_RS08915 PF17757 UvrB interaction domain HRR28_RS08915 PF12344 Ultra-violet resistance protein B HRR28_RS08915 PF02151 UvrB/uvrC motif HRR28_RS08915 PF04851 Type III restriction enzyme, res subunit HRR28_RS08915 PF00271 Helicase conserved C-terminal domain HRR28_RS08920 PF03601 Conserved hypothetical protein 698 HRR28_RS08930 PF14537 Cytochrome c3 HRR28_RS08930 PF00890 FAD binding domain HRR28_RS08950 PF01121 Dephospho-CoA kinase HRR28_RS08955 PF00575 S1 RNA binding domain HRR28_RS08965 PF01384 Phosphate transporter family HRR28_RS08975 PF00543 Nitrogen regulatory protein P-II HRR28_RS08980 PF00909 Ammonium Transporter Family HRR28_RS08990 PF01145 SPFH domain / Band 7 family HRR28_RS09000 PF03916 Polysulphide reductase, NrfD HRR28_RS09010 PF12800 4Fe-4S binding domain HRR28_RS09010 PF13247 4Fe-4S dicluster domain HRR28_RS09015 PF12800 4Fe-4S binding domain HRR28_RS09015 PF13247 4Fe-4S dicluster domain HRR28_RS09020 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09020 PF00384 Molybdopterin oxidoreductase HRR28_RS09025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRR28_RS09025 PF02780 Transketolase, C-terminal domain HRR28_RS09025 PF02779 Transketolase, pyrimidine binding domain HRR28_RS09035 PF01029 NusB family HRR28_RS09045 PF00289 Biotin carboxylase, N-terminal domain HRR28_RS09045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRR28_RS09045 PF02785 Biotin carboxylase C-terminal domain HRR28_RS09050 PF00364 Biotin-requiring enzyme HRR28_RS09050 PF00682 HMGL-like HRR28_RS09050 PF02436 Conserved carboxylase domain HRR28_RS09075 PF02645 Uncharacterised protein, DegV family COG1307 HRR28_RS09080 PF01797 Transposase IS200 like HRR28_RS09085 PF01797 Transposase IS200 like HRR28_RS09090 PF09285 Elongation factor P, C-terminal HRR28_RS09090 PF08207 Elongation factor P (EF-P) KOW-like domain HRR28_RS09090 PF01132 Elongation factor P (EF-P) OB domain HRR28_RS09095 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS09095 PF00072 Response regulator receiver domain HRR28_RS09100 PF00384 Molybdopterin oxidoreductase HRR28_RS09100 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS09105 PF12800 4Fe-4S binding domain HRR28_RS09105 PF13247 4Fe-4S dicluster domain HRR28_RS09110 PF02613 Nitrate reductase delta subunit HRR28_RS09125 PF01321 Creatinase/Prolidase N-terminal domain HRR28_RS09125 PF00557 Metallopeptidase family M24 HRR28_RS09130 PF01220 Dehydroquinase class II HRR28_RS09135 PF01761 3-dehydroquinate synthase HRR28_RS09140 PF01202 Shikimate kinase HRR28_RS09145 PF01264 Chorismate synthase HRR28_RS09150 PF00152 tRNA synthetases class II (D, K and N) HRR28_RS09150 PF01336 OB-fold nucleic acid binding domain HRR28_RS09155 PF08501 Shikimate dehydrogenase substrate binding domain HRR28_RS09155 PF01488 Shikimate / quinate 5-dehydrogenase HRR28_RS09155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRR28_RS09170 PF03652 Holliday junction resolvase HRR28_RS09175 PF05816 Toxic anion resistance protein (TelA) HRR28_RS09195 PF01695 IstB-like ATP binding protein HRR28_RS09205 PF01527 Transposase HRR28_RS09205 PF00665 Integrase core domain HRR28_RS09205 PF13276 HTH-like domain HRR28_RS09205 PF13333 Integrase core domain HRR28_RS09210 PF00589 Phage integrase family HRR28_RS09210 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS09220 PF12161 HsdM N-terminal domain HRR28_RS09220 PF02384 N-6 DNA Methylase HRR28_RS09225 PF02272 DHHA1 domain HRR28_RS09225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRR28_RS09225 PF01411 tRNA synthetases class II (A) HRR28_RS09240 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS09240 PF16193 AAA C-terminal domain HRR28_RS09240 PF12002 MgsA AAA+ ATPase C terminal HRR28_RS09245 PF00483 Nucleotidyl transferase HRR28_RS09250 PF02424 ApbE family HRR28_RS09265 PF04205 FMN-binding domain HRR28_RS09265 PF00890 FAD binding domain HRR28_RS09285 PF01638 HxlR-like helix-turn-helix HRR28_RS09320 PF00005 ABC transporter HRR28_RS09335 PF02335 Cytochrome c552 HRR28_RS09340 PF12801 4Fe-4S binding domain HRR28_RS09340 PF13237 4Fe-4S dicluster domain HRR28_RS09355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS09355 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09355 PF00384 Molybdopterin oxidoreductase HRR28_RS09360 PF12800 4Fe-4S binding domain HRR28_RS09360 PF12838 4Fe-4S dicluster domain HRR28_RS09365 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS09365 PF00155 Aminotransferase class I and II HRR28_RS09370 PF01812 5-formyltetrahydrofolate cyclo-ligase family HRR28_RS09385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRR28_RS09385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRR28_RS09395 PF00180 Isocitrate/isopropylmalate dehydrogenase HRR28_RS09400 PF00570 HRDC domain HRR28_RS09400 PF00270 DEAD/DEAH box helicase HRR28_RS09400 PF09382 RQC domain HRR28_RS09400 PF00271 Helicase conserved C-terminal domain HRR28_RS09400 PF16124 RecQ zinc-binding HRR28_RS09405 PF00583 Acetyltransferase (GNAT) family HRR28_RS09410 PF00942 Cellulose binding domain HRR28_RS09410 PF00150 Cellulase (glycosyl hydrolase family 5) HRR28_RS09425 PF00398 Ribosomal RNA adenine dimethylase HRR28_RS09435 PF01026 TatD related DNase HRR28_RS09440 PF09334 tRNA synthetases class I (M) HRR28_RS09440 PF01588 Putative tRNA binding domain HRR28_RS09440 PF08264 Anticodon-binding domain of tRNA HRR28_RS09445 PF01627 Hpt domain HRR28_RS09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS09445 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS09445 PF00072 Response regulator receiver domain HRR28_RS09450 PF02082 Transcriptional regulator HRR28_RS09455 PF00266 Aminotransferase class-V HRR28_RS09460 PF01592 NifU-like N terminal domain HRR28_RS09475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRR28_RS09480 PF01869 BadF/BadG/BcrA/BcrD ATPase family HRR28_RS09485 PF00440 Bacterial regulatory proteins, tetR family HRR28_RS09490 PF03816 Cell envelope-related transcriptional attenuator domain HRR28_RS09510 PF00037 4Fe-4S binding domain HRR28_RS09510 PF13247 4Fe-4S dicluster domain HRR28_RS09515 PF00384 Molybdopterin oxidoreductase HRR28_RS09515 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09525 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS09540 PF00484 Carbonic anhydrase HRR28_RS09560 PF02861 Clp amino terminal domain, pathogenicity island component HRR28_RS09560 PF07724 AAA domain (Cdc48 subfamily) HRR28_RS09560 PF00004 ATPase family associated with various cellular activities (AAA) HRR28_RS09560 PF17871 AAA lid domain HRR28_RS09560 PF10431 C-terminal, D2-small domain, of ClpB protein HRR28_RS09565 PF00069 Protein kinase domain HRR28_RS09565 PF03793 PASTA domain HRR28_RS09575 PF05167 Uncharacterised ACR (DUF711) HRR28_RS09585 PF05336 L-rhamnose mutarotase HRR28_RS09590 PF12800 4Fe-4S binding domain HRR28_RS09590 PF13247 4Fe-4S dicluster domain HRR28_RS09595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS09595 PF00384 Molybdopterin oxidoreductase HRR28_RS09595 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09615 PF13247 4Fe-4S dicluster domain HRR28_RS09615 PF12800 4Fe-4S binding domain HRR28_RS09620 PF00384 Molybdopterin oxidoreductase HRR28_RS09620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS09620 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09625 PF03061 Thioesterase superfamily HRR28_RS09630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS09630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS09640 PF03606 C4-dicarboxylate anaerobic carrier HRR28_RS09650 PF01381 Helix-turn-helix HRR28_RS09655 PF05336 L-rhamnose mutarotase HRR28_RS09660 PF03061 Thioesterase superfamily HRR28_RS09675 PF00072 Response regulator receiver domain HRR28_RS09675 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS09685 PF17874 MalT-like TPR region HRR28_RS09685 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS09690 PF03466 LysR substrate binding domain HRR28_RS09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS09700 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS09700 PF17874 MalT-like TPR region HRR28_RS09705 PF00271 Helicase conserved C-terminal domain HRR28_RS09705 PF08494 DEAD/H associated HRR28_RS09705 PF00270 DEAD/DEAH box helicase HRR28_RS09720 PF00890 FAD binding domain HRR28_RS09725 PF13411 MerR HTH family regulatory protein HRR28_RS09725 PF07739 TipAS antibiotic-recognition domain HRR28_RS09730 PF07690 Major Facilitator Superfamily HRR28_RS09735 PF03577 Peptidase family C69 HRR28_RS09750 PF13538 UvrD-like helicase C-terminal domain HRR28_RS09765 PF02361 Cobalt transport protein HRR28_RS09770 PF00005 ABC transporter HRR28_RS09775 PF00005 ABC transporter HRR28_RS09790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS09790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS09795 PF13520 Amino acid permease HRR28_RS09800 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRR28_RS09805 PF18152 DAHP synthase ferredoxin-like domain HRR28_RS09805 PF00793 DAHP synthetase I family HRR28_RS09830 PF13247 4Fe-4S dicluster domain HRR28_RS09830 PF12800 4Fe-4S binding domain HRR28_RS09835 PF01568 Molydopterin dinucleotide binding domain HRR28_RS09835 PF18364 Molybdopterin oxidoreductase N-terminal domain HRR28_RS09835 PF00384 Molybdopterin oxidoreductase HRR28_RS09845 PF01145 SPFH domain / Band 7 family HRR28_RS09850 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS09860 PF02673 Bacitracin resistance protein BacA HRR28_RS09875 PF00588 SpoU rRNA Methylase family HRR28_RS09880 PF03793 PASTA domain HRR28_RS09880 PF00069 Protein kinase domain HRR28_RS09900 PF00005 ABC transporter HRR28_RS09910 PF00072 Response regulator receiver domain HRR28_RS09910 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS09915 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS09920 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HRR28_RS09925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HRR28_RS09925 PF17848 Acetyl-coA carboxylase zinc finger domain HRR28_RS09930 PF07977 FabA-like domain HRR28_RS09935 PF02801 Beta-ketoacyl synthase, C-terminal domain HRR28_RS09935 PF00109 Beta-ketoacyl synthase, N-terminal domain HRR28_RS09945 PF00109 Beta-ketoacyl synthase, N-terminal domain HRR28_RS09945 PF02801 Beta-ketoacyl synthase, C-terminal domain HRR28_RS09945 PF00698 Acyl transferase domain HRR28_RS09945 PF08659 KR domain HRR28_RS09945 PF16197 Ketoacyl-synthetase C-terminal extension HRR28_RS09945 PF00550 Phosphopantetheine attachment site HRR28_RS09945 PF00107 Zinc-binding dehydrogenase HRR28_RS09945 PF08240 Alcohol dehydrogenase GroES-like domain HRR28_RS09945 PF14765 Polyketide synthase dehydratase HRR28_RS09950 PF03060 Nitronate monooxygenase HRR28_RS09955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRR28_RS09955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRR28_RS09960 PF09587 Bacterial capsule synthesis protein PGA_cap HRR28_RS09990 PF04055 Radical SAM superfamily HRR28_RS09990 PF16199 Radical_SAM C-terminal domain HRR28_RS09990 PF00583 Acetyltransferase (GNAT) family HRR28_RS10000 PF11756 Nitrous oxide-stimulated promoter HRR28_RS10005 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRR28_RS10010 PF00005 ABC transporter HRR28_RS10010 PF12848 ABC transporter HRR28_RS10020 PF06414 Zeta toxin HRR28_RS10025 PF13247 4Fe-4S dicluster domain HRR28_RS10030 PF00384 Molybdopterin oxidoreductase HRR28_RS10030 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS10035 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10035 PF00384 Molybdopterin oxidoreductase HRR28_RS10035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS10040 PF00155 Aminotransferase class I and II HRR28_RS10060 PF09308 LuxQ, periplasmic HRR28_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS10060 PF00072 Response regulator receiver domain HRR28_RS10060 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS10065 PF00291 Pyridoxal-phosphate dependent enzyme HRR28_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS10070 PF03466 LysR substrate binding domain HRR28_RS10080 PF02110 Hydroxyethylthiazole kinase family HRR28_RS10085 PF01910 Thiamine-binding protein HRR28_RS10095 PF00155 Aminotransferase class I and II HRR28_RS10095 PF00392 Bacterial regulatory proteins, gntR family HRR28_RS10100 PF01680 SOR/SNZ family HRR28_RS10105 PF01174 SNO glutamine amidotransferase family HRR28_RS10110 PF00270 DEAD/DEAH box helicase HRR28_RS10110 PF17191 RecG wedge domain HRR28_RS10110 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HRR28_RS10125 PF00665 Integrase core domain HRR28_RS10130 PF01695 IstB-like ATP binding protein HRR28_RS10145 PF03852 DNA mismatch endonuclease Vsr HRR28_RS10150 PF02557 D-alanyl-D-alanine carboxypeptidase HRR28_RS10160 PF12800 4Fe-4S binding domain HRR28_RS10160 PF13247 4Fe-4S dicluster domain HRR28_RS10165 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10165 PF00384 Molybdopterin oxidoreductase HRR28_RS10165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS10170 PF13247 4Fe-4S dicluster domain HRR28_RS10170 PF12800 4Fe-4S binding domain HRR28_RS10175 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HRR28_RS10175 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HRR28_RS10185 PF01106 NifU-like domain HRR28_RS10185 PF04324 BFD-like [2Fe-2S] binding domain HRR28_RS10185 PF01592 NifU-like N terminal domain HRR28_RS10190 PF00072 Response regulator receiver domain HRR28_RS10190 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10200 PF00155 Aminotransferase class I and II HRR28_RS10210 PF00083 Sugar (and other) transporter HRR28_RS10210 PF08946 Osmosensory transporter coiled coil HRR28_RS10225 PF00083 Sugar (and other) transporter HRR28_RS10225 PF08946 Osmosensory transporter coiled coil HRR28_RS10245 PF00696 Amino acid kinase family HRR28_RS10250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS10250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS10260 PF01979 Amidohydrolase family HRR28_RS10270 PF00872 Transposase, Mutator family HRR28_RS10280 PF07728 AAA domain (dynein-related subfamily) HRR28_RS10280 PF12102 Domain of unknown function (DUF3578) HRR28_RS10285 PF10117 McrBC 5-methylcytosine restriction system component HRR28_RS10310 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS10310 PF00589 Phage integrase family HRR28_RS10325 PF00958 GMP synthase C terminal domain HRR28_RS10325 PF00117 Glutamine amidotransferase class-I HRR28_RS10325 PF02540 NAD synthase HRR28_RS10340 PF01022 Bacterial regulatory protein, arsR family HRR28_RS10345 PF00403 Heavy-metal-associated domain HRR28_RS10350 PF00403 Heavy-metal-associated domain HRR28_RS10365 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10365 PF00072 Response regulator receiver domain HRR28_RS10375 PF13247 4Fe-4S dicluster domain HRR28_RS10375 PF12800 4Fe-4S binding domain HRR28_RS10380 PF00384 Molybdopterin oxidoreductase HRR28_RS10380 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS10390 PF16320 Ribosomal protein L7/L12 dimerisation domain HRR28_RS10390 PF00542 Ribosomal protein L7/L12 C-terminal domain HRR28_RS10395 PF00466 Ribosomal protein L10 HRR28_RS10400 PF00072 Response regulator receiver domain HRR28_RS10400 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10405 PF00890 FAD binding domain HRR28_RS10405 PF14537 Cytochrome c3 HRR28_RS10415 PF01850 PIN domain HRR28_RS10425 PF13393 Histidyl-tRNA synthetase HRR28_RS10425 PF03129 Anticodon binding domain HRR28_RS10430 PF00180 Isocitrate/isopropylmalate dehydrogenase HRR28_RS10435 PF00694 Aconitase C-terminal domain HRR28_RS10440 PF00330 Aconitase family (aconitate hydratase) HRR28_RS10450 PF00348 Polyprenyl synthetase HRR28_RS10465 PF01794 Ferric reductase like transmembrane component HRR28_RS10465 PF04205 FMN-binding domain HRR28_RS10475 PF13247 4Fe-4S dicluster domain HRR28_RS10475 PF00037 4Fe-4S binding domain HRR28_RS10480 PF00384 Molybdopterin oxidoreductase HRR28_RS10480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS10480 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10485 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS10485 PF00072 Response regulator receiver domain HRR28_RS10490 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS10505 PF02541 Ppx/GppA phosphatase family HRR28_RS10525 PF04023 FeoA domain HRR28_RS10525 PF07664 Ferrous iron transport protein B C terminus HRR28_RS10525 PF17910 FeoB cytosolic helical domain HRR28_RS10525 PF02421 Ferrous iron transport protein B HRR28_RS10525 PF07670 Nucleoside recognition HRR28_RS10540 PF14821 Threonine synthase N terminus HRR28_RS10540 PF00291 Pyridoxal-phosphate dependent enzyme HRR28_RS10600 PF00437 Type II/IV secretion system protein HRR28_RS10620 PF01381 Helix-turn-helix HRR28_RS10625 PF00005 ABC transporter HRR28_RS10640 PF00892 EamA-like transporter family HRR28_RS10655 PF03466 LysR substrate binding domain HRR28_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS10665 PF13247 4Fe-4S dicluster domain HRR28_RS10665 PF12800 4Fe-4S binding domain HRR28_RS10670 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10670 PF00384 Molybdopterin oxidoreductase HRR28_RS10675 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10680 PF00072 Response regulator receiver domain HRR28_RS10680 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRR28_RS10685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRR28_RS10730 PF00005 ABC transporter HRR28_RS10755 PF00005 ABC transporter HRR28_RS10760 PF11808 Phosphate regulon sensor protein PhoR HRR28_RS10760 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS10760 PF00989 PAS fold HRR28_RS10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS10765 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS10765 PF00072 Response regulator receiver domain HRR28_RS10770 PF04127 DNA / pantothenate metabolism flavoprotein HRR28_RS10770 PF02441 Flavoprotein HRR28_RS10775 PF01842 ACT domain HRR28_RS10775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRR28_RS10775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRR28_RS10780 PF13977 BetI-type transcriptional repressor, C-terminal HRR28_RS10780 PF00440 Bacterial regulatory proteins, tetR family HRR28_RS10800 PF09308 LuxQ, periplasmic HRR28_RS10800 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS10800 PF00072 Response regulator receiver domain HRR28_RS10805 PF09334 tRNA synthetases class I (M) HRR28_RS10805 PF00133 tRNA synthetases class I (I, L, M and V) HRR28_RS10805 PF08264 Anticodon-binding domain of tRNA HRR28_RS10805 PF13603 Leucyl-tRNA synthetase, Domain 2 HRR28_RS10815 PF01926 50S ribosome-binding GTPase HRR28_RS10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS10825 PF03466 LysR substrate binding domain HRR28_RS10830 PF00478 IMP dehydrogenase / GMP reductase domain HRR28_RS10830 PF00571 CBS domain HRR28_RS10845 PF02915 Rubrerythrin HRR28_RS10850 PF02127 Aminopeptidase I zinc metalloprotease (M18) HRR28_RS10855 PF00696 Amino acid kinase family HRR28_RS10885 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRR28_RS10890 PF13520 Amino acid permease HRR28_RS10895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRR28_RS10895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRR28_RS10905 PF00072 Response regulator receiver domain HRR28_RS10905 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS10910 PF07969 Amidohydrolase family HRR28_RS10935 PF01063 Amino-transferase class IV HRR28_RS10950 PF17149 Periplasmic sensor domain found in signal transduction proteins HRR28_RS10950 PF00672 HAMP domain HRR28_RS10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS10950 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS10950 PF01627 Hpt domain HRR28_RS10950 PF00072 Response regulator receiver domain HRR28_RS10965 PF07690 Major Facilitator Superfamily HRR28_RS10970 PF00860 Permease family HRR28_RS10975 PF00860 Permease family HRR28_RS10990 PF12800 4Fe-4S binding domain HRR28_RS10990 PF13247 4Fe-4S dicluster domain HRR28_RS10995 PF01568 Molydopterin dinucleotide binding domain HRR28_RS10995 PF00384 Molybdopterin oxidoreductase HRR28_RS10995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS11005 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11005 PF00072 Response regulator receiver domain HRR28_RS11030 PF01568 Molydopterin dinucleotide binding domain HRR28_RS11030 PF00384 Molybdopterin oxidoreductase HRR28_RS11035 PF12800 4Fe-4S binding domain HRR28_RS11035 PF13247 4Fe-4S dicluster domain HRR28_RS11050 PF00795 Carbon-nitrogen hydrolase HRR28_RS11055 PF07690 Major Facilitator Superfamily HRR28_RS11060 PF00860 Permease family HRR28_RS11070 PF00072 Response regulator receiver domain HRR28_RS11070 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11090 PF00072 Response regulator receiver domain HRR28_RS11090 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS11100 PF00672 HAMP domain HRR28_RS11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS11100 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS11125 PF12800 4Fe-4S binding domain HRR28_RS11125 PF13247 4Fe-4S dicluster domain HRR28_RS11130 PF01568 Molydopterin dinucleotide binding domain HRR28_RS11130 PF00384 Molybdopterin oxidoreductase HRR28_RS11145 PF02613 Nitrate reductase delta subunit HRR28_RS11170 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS11180 PF00005 ABC transporter HRR28_RS11185 PF00072 Response regulator receiver domain HRR28_RS11185 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS11195 PF18318 Glutamine synthetase C-terminal domain HRR28_RS11195 PF00120 Glutamine synthetase, catalytic domain HRR28_RS11195 PF12437 Glutamine synthetase type III N terminal HRR28_RS11200 PF07690 Major Facilitator Superfamily HRR28_RS11205 PF00596 Class II Aldolase and Adducin N-terminal domain HRR28_RS11210 PF06134 L-rhamnose isomerase (RhaA) HRR28_RS11210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRR28_RS11210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRR28_RS11215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRR28_RS11215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRR28_RS11240 PF00380 Ribosomal protein S9/S16 HRR28_RS11245 PF00572 Ribosomal protein L13 HRR28_RS11260 PF02535 ZIP Zinc transporter HRR28_RS11270 PF00310 Glutamine amidotransferases class-II HRR28_RS11275 PF13187 4Fe-4S dicluster domain HRR28_RS11275 PF01645 Conserved region in glutamate synthase HRR28_RS11285 PF14537 Cytochrome c3 HRR28_RS11285 PF00890 FAD binding domain HRR28_RS11290 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11300 PF04204 Homoserine O-succinyltransferase HRR28_RS11305 PF01053 Cys/Met metabolism PLP-dependent enzyme HRR28_RS11325 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11355 PF17874 MalT-like TPR region HRR28_RS11355 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11370 PF01381 Helix-turn-helix HRR28_RS11380 PF00742 Homoserine dehydrogenase HRR28_RS11380 PF01842 ACT domain HRR28_RS11380 PF03447 Homoserine dehydrogenase, NAD binding domain HRR28_RS11390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRR28_RS11390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRR28_RS11405 PF00209 Sodium:neurotransmitter symporter family HRR28_RS11430 PF09335 SNARE associated Golgi protein HRR28_RS11445 PF01820 D-ala D-ala ligase N-terminus HRR28_RS11445 PF07478 D-ala D-ala ligase C-terminus HRR28_RS11450 PF00155 Aminotransferase class I and II HRR28_RS11465 PF02403 Seryl-tRNA synthetase N-terminal domain HRR28_RS11465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRR28_RS11475 PF00069 Protein kinase domain HRR28_RS11475 PF03793 PASTA domain HRR28_RS11480 PF01261 Xylose isomerase-like TIM barrel HRR28_RS11490 PF06580 Histidine kinase HRR28_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS11490 PF07694 5TMR of 5TMR-LYT HRR28_RS11495 PF01925 Sulfite exporter TauE/SafE HRR28_RS11505 PF03193 RsgA GTPase HRR28_RS11515 PF02386 Cation transport protein HRR28_RS11520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRR28_RS11520 PF01565 FAD binding domain HRR28_RS11525 PF00586 AIR synthase related protein, N-terminal domain HRR28_RS11525 PF02769 AIR synthase related protein, C-terminal domain HRR28_RS11525 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRR28_RS11535 PF01259 SAICAR synthetase HRR28_RS11540 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS11540 PF16736 Single Cache-like HRR28_RS11540 PF00989 PAS fold HRR28_RS11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS11545 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS11545 PF00072 Response regulator receiver domain HRR28_RS11555 PF01915 Glycosyl hydrolase family 3 C-terminal domain HRR28_RS11555 PF00933 Glycosyl hydrolase family 3 N terminal domain HRR28_RS11560 PF02683 Cytochrome C biogenesis protein transmembrane region HRR28_RS11565 PF08534 Redoxin HRR28_RS11570 PF10397 Adenylosuccinate lyase C-terminus HRR28_RS11570 PF00206 Lyase HRR28_RS11575 PF00890 FAD binding domain HRR28_RS11575 PF14537 Cytochrome c3 HRR28_RS11580 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11595 PF08544 GHMP kinases C terminal HRR28_RS11595 PF00288 GHMP kinases N terminal domain HRR28_RS11605 PF14437 MafB19-like deaminase HRR28_RS11615 PF00285 Citrate synthase, C-terminal domain HRR28_RS11625 PF00571 CBS domain HRR28_RS11625 PF03448 MgtE intracellular N domain HRR28_RS11625 PF01769 Divalent cation transporter HRR28_RS11635 PF02082 Transcriptional regulator HRR28_RS11640 PF03553 Na+/H+ antiporter family HRR28_RS11645 PF00474 Sodium:solute symporter family HRR28_RS11660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRR28_RS11660 PF16582 Middle domain of thiamine pyrophosphate HRR28_RS11660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRR28_RS11665 PF00425 chorismate binding enzyme HRR28_RS11680 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS11715 PF01227 GTP cyclohydrolase I HRR28_RS11720 PF01741 Large-conductance mechanosensitive channel, MscL HRR28_RS11725 PF07690 Major Facilitator Superfamily HRR28_RS11730 PF00027 Cyclic nucleotide-binding domain HRR28_RS11730 PF13545 Crp-like helix-turn-helix domain HRR28_RS11735 PF12800 4Fe-4S binding domain HRR28_RS11735 PF13247 4Fe-4S dicluster domain HRR28_RS11740 PF00384 Molybdopterin oxidoreductase HRR28_RS11740 PF01568 Molydopterin dinucleotide binding domain HRR28_RS11745 PF02590 Predicted SPOUT methyltransferase HRR28_RS11750 PF03372 Endonuclease/Exonuclease/phosphatase family HRR28_RS11755 PF03816 Cell envelope-related transcriptional attenuator domain HRR28_RS11760 PF08353 Domain of unknown function (DUF1727) HRR28_RS11760 PF08245 Mur ligase middle domain HRR28_RS11770 PF00005 ABC transporter HRR28_RS11770 PF17760 UvrA interaction domain HRR28_RS11770 PF17755 UvrA DNA-binding domain HRR28_RS11790 PF13247 4Fe-4S dicluster domain HRR28_RS11790 PF00037 4Fe-4S binding domain HRR28_RS11795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS11795 PF00384 Molybdopterin oxidoreductase HRR28_RS11795 PF01568 Molydopterin dinucleotide binding domain HRR28_RS11800 PF03466 LysR substrate binding domain HRR28_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS11810 PF14537 Cytochrome c3 HRR28_RS11810 PF00890 FAD binding domain HRR28_RS11815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS11815 PF03466 LysR substrate binding domain HRR28_RS11820 PF17191 RecG wedge domain HRR28_RS11820 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HRR28_RS11820 PF00270 DEAD/DEAH box helicase HRR28_RS11835 PF02525 Flavodoxin-like fold HRR28_RS11840 PF04343 Protein of unknown function, DUF488 HRR28_RS11845 PF00860 Permease family HRR28_RS11850 PF00155 Aminotransferase class I and II HRR28_RS11855 PF13520 Amino acid permease HRR28_RS11865 PF03641 Possible lysine decarboxylase HRR28_RS11870 PF08448 PAS fold HRR28_RS11870 PF00990 Diguanylate cyclase, GGDEF domain HRR28_RS11870 PF08447 PAS fold HRR28_RS11870 PF00563 EAL domain HRR28_RS11870 PF05231 MASE1 HRR28_RS11870 PF13426 PAS domain HRR28_RS11880 PF00085 Thioredoxin HRR28_RS11885 PF07690 Major Facilitator Superfamily HRR28_RS11890 PF00999 Sodium/hydrogen exchanger family HRR28_RS11895 PF02540 NAD synthase HRR28_RS11895 PF00958 GMP synthase C terminal domain HRR28_RS11905 PF01381 Helix-turn-helix HRR28_RS11925 PF07859 alpha/beta hydrolase fold HRR28_RS11940 PF01381 Helix-turn-helix HRR28_RS11945 PF13673 Acetyltransferase (GNAT) domain HRR28_RS11955 PF07690 Major Facilitator Superfamily HRR28_RS11960 PF13419 Haloacid dehalogenase-like hydrolase HRR28_RS11965 PF04960 Glutaminase HRR28_RS11970 PF02146 Sir2 family HRR28_RS11980 PF04471 Restriction endonuclease HRR28_RS11980 PF14338 Mrr N-terminal domain HRR28_RS12000 PF02899 Phage integrase, N-terminal SAM-like domain HRR28_RS12000 PF00589 Phage integrase family HRR28_RS12020 PF02384 N-6 DNA Methylase HRR28_RS12025 PF18766 SWI2/SNF2 ATPase HRR28_RS12025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HRR28_RS12025 PF11867 Domain of unknown function (DUF3387) HRR28_RS12040 PF02645 Uncharacterised protein, DegV family COG1307 HRR28_RS12050 PF07739 TipAS antibiotic-recognition domain HRR28_RS12050 PF13411 MerR HTH family regulatory protein HRR28_RS12060 PF13247 4Fe-4S dicluster domain HRR28_RS12060 PF12800 4Fe-4S binding domain HRR28_RS12065 PF01568 Molydopterin dinucleotide binding domain HRR28_RS12065 PF00384 Molybdopterin oxidoreductase HRR28_RS12065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRR28_RS12080 PF03960 ArsC family HRR28_RS12090 PF00174 Oxidoreductase molybdopterin binding domain HRR28_RS12110 PF04205 FMN-binding domain HRR28_RS12110 PF03358 NADPH-dependent FMN reductase HRR28_RS12110 PF00890 FAD binding domain HRR28_RS12120 PF04073 Aminoacyl-tRNA editing domain HRR28_RS12130 PF00301 Rubredoxin HRR28_RS12140 PF13520 Amino acid permease HRR28_RS12145 PF03051 Peptidase C1-like family HRR28_RS12155 PF00301 Rubredoxin HRR28_RS12160 PF07690 Major Facilitator Superfamily HRR28_RS12180 PF00196 Bacterial regulatory proteins, luxR family HRR28_RS12185 PF03466 LysR substrate binding domain HRR28_RS12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRR28_RS12190 PF04205 FMN-binding domain HRR28_RS12190 PF03358 NADPH-dependent FMN reductase HRR28_RS12190 PF00890 FAD binding domain HRR28_RS12195 PF03358 NADPH-dependent FMN reductase HRR28_RS12195 PF04205 FMN-binding domain HRR28_RS12195 PF00890 FAD binding domain HRR28_RS12215 PF00005 ABC transporter HRR28_RS12230 PF00486 Transcriptional regulatory protein, C terminal HRR28_RS12230 PF00072 Response regulator receiver domain HRR28_RS12235 PF00512 His Kinase A (phospho-acceptor) domain HRR28_RS12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRR28_RS12250 PF01638 HxlR-like helix-turn-helix HRR28_RS12270 PF05872 Bacterial protein of unknown function (DUF853) HRR28_RS12275 PF03649 Uncharacterised protein family (UPF0014) HRR28_RS12280 PF00005 ABC transporter HRR28_RS12280 PF09383 NIL domain HRR28_RS12370 PF00156 Phosphoribosyl transferase domain HRR28_RS12375 PF00501 AMP-binding enzyme HRR28_RS12375 PF13193 AMP-binding enzyme C-terminal domain HRR28_RS12380 PF00378 Enoyl-CoA hydratase/isomerase HRR28_RS12385 PF00437 Type II/IV secretion system protein