locus-tag class description AP3564_RS00075 PF05593 RHS Repeat AP3564_RS00085 PF09299 Mu transposase, C-terminal AP3564_RS00085 PF00665 Integrase core domain AP3564_RS00145 PF05593 RHS Repeat AP3564_RS00150 PF05593 RHS Repeat AP3564_RS00180 PF05593 RHS Repeat AP3564_RS00185 PF01078 Magnesium chelatase, subunit ChlI AP3564_RS00185 PF13335 Magnesium chelatase, subunit ChlI C-terminal AP3564_RS00200 PF00005 ABC transporter AP3564_RS00200 PF12558 ATP-binding cassette cobalt transporter AP3564_RS00205 PF07155 ECF-type riboflavin transporter, S component AP3564_RS00220 PF00155 Aminotransferase class I and II AP3564_RS00220 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS00230 PF13673 Acetyltransferase (GNAT) domain AP3564_RS00250 PF13439 Glycosyltransferase Family 4 AP3564_RS00255 PF00586 AIR synthase related protein, N-terminal domain AP3564_RS00255 PF02769 AIR synthase related protein, C-terminal domain AP3564_RS00260 PF00795 Carbon-nitrogen hydrolase AP3564_RS00265 PF03358 NADPH-dependent FMN reductase AP3564_RS00300 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS00305 PF00005 ABC transporter AP3564_RS00310 PF00005 ABC transporter AP3564_RS00310 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP3564_RS00325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AP3564_RS00325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AP3564_RS00330 PF01575 MaoC like domain AP3564_RS00335 PF00501 AMP-binding enzyme AP3564_RS00335 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS00360 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS00360 PF00155 Aminotransferase class I and II AP3564_RS00370 PF00202 Aminotransferase class-III AP3564_RS00375 PF00171 Aldehyde dehydrogenase family AP3564_RS00395 PF02817 e3 binding domain AP3564_RS00395 PF00364 Biotin-requiring enzyme AP3564_RS00395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS00400 PF01979 Amidohydrolase family AP3564_RS00405 PF08281 Sigma-70, region 4 AP3564_RS00405 PF04542 Sigma-70 region 2 AP3564_RS00415 PF13732 Domain of unknown function (DUF4162) AP3564_RS00415 PF00005 ABC transporter AP3564_RS00445 PF00005 ABC transporter AP3564_RS00465 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS00465 PF00072 Response regulator receiver domain AP3564_RS00470 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS00470 PF00989 PAS fold AP3564_RS00470 PF16736 Single Cache-like AP3564_RS00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS00480 PF00106 short chain dehydrogenase AP3564_RS00485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AP3564_RS00485 PF00874 PRD domain AP3564_RS00485 PF05043 Mga helix-turn-helix domain AP3564_RS00485 PF08279 HTH domain AP3564_RS00495 PF03608 PTS system enzyme II sorbitol-specific factor AP3564_RS00500 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AP3564_RS00500 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AP3564_RS00510 PF00255 Glutathione peroxidase AP3564_RS00515 PF00753 Metallo-beta-lactamase superfamily AP3564_RS00520 PF04231 Endonuclease I AP3564_RS00530 PF00795 Carbon-nitrogen hydrolase AP3564_RS00540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AP3564_RS00540 PF02378 Phosphotransferase system, EIIC AP3564_RS00540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AP3564_RS00545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AP3564_RS00550 PF03611 PTS system sugar-specific permease component AP3564_RS00555 PF00107 Zinc-binding dehydrogenase AP3564_RS00555 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS00565 PF00107 Zinc-binding dehydrogenase AP3564_RS00565 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS00585 PF07690 Major Facilitator Superfamily AP3564_RS00585 PF00083 Sugar (and other) transporter AP3564_RS00590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS00590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS00600 PF03466 LysR substrate binding domain AP3564_RS00605 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AP3564_RS00605 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AP3564_RS00610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP3564_RS00615 PF00171 Aldehyde dehydrogenase family AP3564_RS00620 PF01613 Flavin reductase like domain AP3564_RS00625 PF01687 Riboflavin kinase AP3564_RS00625 PF06574 FAD synthetase AP3564_RS00630 PF00701 Dihydrodipicolinate synthetase family AP3564_RS00635 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS00640 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS00650 PF00171 Aldehyde dehydrogenase family AP3564_RS00660 PF00171 Aldehyde dehydrogenase family AP3564_RS00665 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS00680 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS00685 PF11862 Domain of unknown function (DUF3382) AP3564_RS00685 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS00690 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP3564_RS00690 PF00005 ABC transporter AP3564_RS00695 PF00005 ABC transporter AP3564_RS00700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AP3564_RS00700 PF00355 Rieske [2Fe-2S] domain AP3564_RS00705 PF00866 Ring hydroxylating beta subunit AP3564_RS00715 PF06505 Activator of aromatic catabolism AP3564_RS00715 PF02830 V4R domain AP3564_RS00715 PF00158 Sigma-54 interaction domain AP3564_RS00715 PF02954 Bacterial regulatory protein, Fis family AP3564_RS00745 PF17863 AAA lid domain AP3564_RS00745 PF07726 ATPase family associated with various cellular activities (AAA) AP3564_RS00750 PF01882 Protein of unknown function DUF58 AP3564_RS00755 PF01841 Transglutaminase-like superfamily AP3564_RS00755 PF11992 Domain of unknown function (DUF3488) AP3564_RS00755 PF13559 Domain of unknown function (DUF4129) AP3564_RS00760 PF00958 GMP synthase C terminal domain AP3564_RS00760 PF02540 NAD synthase AP3564_RS00760 PF00117 Glutamine amidotransferase class-I AP3564_RS00765 PF00860 Permease family AP3564_RS00770 PF00731 AIR carboxylase AP3564_RS00775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AP3564_RS00775 PF02222 ATP-grasp domain AP3564_RS00780 PF00206 Lyase AP3564_RS00780 PF10397 Adenylosuccinate lyase C-terminus AP3564_RS00785 PF01259 SAICAR synthetase AP3564_RS00790 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AP3564_RS00800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AP3564_RS00800 PF02769 AIR synthase related protein, C-terminal domain AP3564_RS00800 PF00586 AIR synthase related protein, N-terminal domain AP3564_RS00805 PF00156 Phosphoribosyl transferase domain AP3564_RS00810 PF02769 AIR synthase related protein, C-terminal domain AP3564_RS00810 PF00586 AIR synthase related protein, N-terminal domain AP3564_RS00815 PF00551 Formyl transferase AP3564_RS00820 PF02142 MGS-like domain AP3564_RS00820 PF01808 AICARFT/IMPCHase bienzyme AP3564_RS00835 PF02844 Phosphoribosylglycinamide synthetase, N domain AP3564_RS00835 PF02843 Phosphoribosylglycinamide synthetase, C domain AP3564_RS00835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AP3564_RS00840 PF01979 Amidohydrolase family AP3564_RS00840 PF13382 Adenine deaminase C-terminal domain AP3564_RS00845 PF17479 Protein of unknown function (DUF3048) C-terminal domain AP3564_RS00845 PF11258 Protein of unknown function (DUF3048) N-terminal domain AP3564_RS00850 PF01371 Trp repressor protein AP3564_RS00855 PF01884 PcrB family AP3564_RS00860 PF13361 UvrD-like helicase C-terminal domain AP3564_RS00860 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS00865 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS00865 PF13361 UvrD-like helicase C-terminal domain AP3564_RS00870 PF00533 BRCA1 C Terminus (BRCT) domain AP3564_RS00870 PF01653 NAD-dependent DNA ligase adenylation domain AP3564_RS00870 PF03120 NAD-dependent DNA ligase OB-fold domain AP3564_RS00870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AP3564_RS00870 PF12826 Helix-hairpin-helix motif AP3564_RS00875 PF07537 CamS sex pheromone cAM373 precursor AP3564_RS00890 PF02686 Glu-tRNAGln amidotransferase C subunit AP3564_RS00895 PF01425 Amidase AP3564_RS00900 PF02934 GatB/GatE catalytic domain AP3564_RS00900 PF02637 GatB domain AP3564_RS00905 PF00781 Diacylglycerol kinase catalytic domain AP3564_RS00915 PF01938 TRAM domain AP3564_RS00915 PF05958 tRNA (Uracil-5-)-methyltransferase AP3564_RS00945 PF02384 N-6 DNA Methylase AP3564_RS00945 PF12161 HsdM N-terminal domain AP3564_RS00975 PF13007 Transposase C of IS166 homeodomain AP3564_RS00975 PF13817 IS66 C-terminal element AP3564_RS00975 PF13005 zinc-finger binding domain of transposase IS66 AP3564_RS00975 PF03050 Transposase IS66 family AP3564_RS00995 PF00270 DEAD/DEAH box helicase AP3564_RS00995 PF00271 Helicase conserved C-terminal domain AP3564_RS00995 PF08494 DEAD/H associated AP3564_RS01005 PF13614 AAA domain AP3564_RS01015 PF00665 Integrase core domain AP3564_RS01015 PF09299 Mu transposase, C-terminal AP3564_RS01030 PF13614 AAA domain AP3564_RS01085 PF02667 Short chain fatty acid transporter AP3564_RS01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS01090 PF03466 LysR substrate binding domain AP3564_RS01095 PF07690 Major Facilitator Superfamily AP3564_RS01095 PF00083 Sugar (and other) transporter AP3564_RS01110 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS01115 PF00005 ABC transporter AP3564_RS01150 PF06039 Malate:quinone oxidoreductase (Mqo) AP3564_RS01155 PF03992 Antibiotic biosynthesis monooxygenase AP3564_RS01160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AP3564_RS01160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AP3564_RS01165 PF17853 GGDEF-like domain AP3564_RS01165 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS01165 PF06018 CodY GAF-like domain AP3564_RS01170 PF00005 ABC transporter AP3564_RS01175 PF01497 Periplasmic binding protein AP3564_RS01180 PF01032 FecCD transport family AP3564_RS01185 PF00005 ABC transporter AP3564_RS01190 PF03992 Antibiotic biosynthesis monooxygenase AP3564_RS01200 PF00005 ABC transporter AP3564_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01210 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP3564_RS01220 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS01235 PF09704 CRISPR-associated protein (Cas_Cas5) AP3564_RS01255 PF01867 CRISPR associated protein Cas1 AP3564_RS01260 PF09827 CRISPR associated protein Cas2 AP3564_RS01265 PF00672 HAMP domain AP3564_RS01265 PF12729 Four helix bundle sensory module for signal transduction AP3564_RS01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS01275 PF00589 Phage integrase family AP3564_RS01280 PF02080 TrkA-C domain AP3564_RS01285 PF00999 Sodium/hydrogen exchanger family AP3564_RS01290 PF01546 Peptidase family M20/M25/M40 AP3564_RS01290 PF07687 Peptidase dimerisation domain AP3564_RS01295 PF00108 Thiolase, N-terminal domain AP3564_RS01295 PF02803 Thiolase, C-terminal domain AP3564_RS01300 PF07690 Major Facilitator Superfamily AP3564_RS01305 PF17922 Tetracyclin repressor-like, C-terminal domain AP3564_RS01305 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS01310 PF06738 Putative threonine/serine exporter AP3564_RS01330 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS01335 PF01202 Shikimate kinase AP3564_RS01340 PF00072 Response regulator receiver domain AP3564_RS01350 PF08402 TOBE domain AP3564_RS01350 PF00005 ABC transporter AP3564_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01365 PF13416 Bacterial extracellular solute-binding protein AP3564_RS01375 PF07690 Major Facilitator Superfamily AP3564_RS01380 PF00199 Catalase AP3564_RS01380 PF06628 Catalase-related immune-responsive AP3564_RS01385 PF00005 ABC transporter AP3564_RS01385 PF00664 ABC transporter transmembrane region AP3564_RS01400 PF00583 Acetyltransferase (GNAT) family AP3564_RS01405 PF01032 FecCD transport family AP3564_RS01410 PF01032 FecCD transport family AP3564_RS01415 PF00005 ABC transporter AP3564_RS01420 PF01497 Periplasmic binding protein AP3564_RS01445 PF02602 Uroporphyrinogen-III synthase HemD AP3564_RS01460 PF17912 MalK OB fold domain AP3564_RS01460 PF00005 ABC transporter AP3564_RS01460 PF03459 TOBE domain AP3564_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01475 PF13416 Bacterial extracellular solute-binding protein AP3564_RS01480 PF04309 Glycerol-3-phosphate responsive antiterminator AP3564_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS01495 PF00005 ABC transporter AP3564_RS01500 PF01638 HxlR-like helix-turn-helix AP3564_RS01515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS01515 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS01515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS01525 PF00665 Integrase core domain AP3564_RS01525 PF13276 HTH-like domain AP3564_RS01525 PF13333 Integrase core domain AP3564_RS01545 PF00155 Aminotransferase class I and II AP3564_RS01545 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS01550 PF00795 Carbon-nitrogen hydrolase AP3564_RS01555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AP3564_RS01555 PF13378 Enolase C-terminal domain-like AP3564_RS01560 PF09515 Thiamine transporter protein (Thia_YuaJ) AP3564_RS01565 PF04235 Protein of unknown function (DUF418) AP3564_RS01570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AP3564_RS01575 PF09350 Domain of unknown function (DUF1992) AP3564_RS01585 PF06569 Protein of unknown function (DUF1128) AP3564_RS01590 PF01451 Low molecular weight phosphotyrosine protein phosphatase AP3564_RS01600 PF03631 Virulence factor BrkB AP3564_RS01615 PF00881 Nitroreductase family AP3564_RS01625 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS01625 PF17932 Tetracyclin repressor-like, C-terminal domain AP3564_RS01645 PF01699 Sodium/calcium exchanger protein AP3564_RS01650 PF14167 YfkD-like protein AP3564_RS01655 PF04055 Radical SAM superfamily AP3564_RS01655 PF08756 YfkB-like domain AP3564_RS01680 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AP3564_RS01680 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AP3564_RS01690 PF00596 Class II Aldolase and Adducin N-terminal domain AP3564_RS01695 PF03079 ARD/ARD' family AP3564_RS01700 PF01636 Phosphotransferase enzyme family AP3564_RS01705 PF01008 Initiation factor 2 subunit family AP3564_RS01710 PF00795 Carbon-nitrogen hydrolase AP3564_RS01715 PF00155 Aminotransferase class I and II AP3564_RS01720 PF05681 Fumarate hydratase (Fumerase) AP3564_RS01720 PF05683 Fumarase C-terminus AP3564_RS01725 PF01522 Polysaccharide deacetylase AP3564_RS01730 PF00730 HhH-GPD superfamily base excision DNA repair protein AP3564_RS01735 PF05958 tRNA (Uracil-5-)-methyltransferase AP3564_RS01735 PF01938 TRAM domain AP3564_RS01745 PF13408 Recombinase zinc beta ribbon domain AP3564_RS01745 PF07508 Recombinase AP3564_RS01775 PF00665 Integrase core domain AP3564_RS01775 PF13276 HTH-like domain AP3564_RS01775 PF13333 Integrase core domain AP3564_RS01830 PF06013 Proteins of 100 residues with WXG AP3564_RS01850 PF10140 WXG100 protein secretion system (Wss), protein YukC AP3564_RS01855 PF12538 DNA transporter AP3564_RS01855 PF01580 FtsK/SpoIIIE family AP3564_RS01930 PF05922 Peptidase inhibitor I9 AP3564_RS01930 PF00082 Subtilase family AP3564_RS01960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AP3564_RS01965 PF01418 Helix-turn-helix domain, rpiR family AP3564_RS01965 PF01380 SIS domain AP3564_RS01970 PF11975 Family 4 glycosyl hydrolase C-terminal domain AP3564_RS01970 PF02056 Family 4 glycosyl hydrolase AP3564_RS01975 PF02378 Phosphotransferase system, EIIC AP3564_RS01975 PF00367 phosphotransferase system, EIIB AP3564_RS01990 PF00005 ABC transporter AP3564_RS02070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AP3564_RS02070 PF08666 SAF domain AP3564_RS02075 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AP3564_RS02090 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS02090 PF07729 FCD domain AP3564_RS02115 PF17932 Tetracyclin repressor-like, C-terminal domain AP3564_RS02115 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS02120 PF03819 MazG nucleotide pyrophosphohydrolase domain AP3564_RS02125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AP3564_RS02140 PF00005 ABC transporter AP3564_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS02150 PF00296 Luciferase-like monooxygenase AP3564_RS02165 PF00082 Subtilase family AP3564_RS02175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP3564_RS02180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AP3564_RS02180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AP3564_RS02185 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS02185 PF00107 Zinc-binding dehydrogenase AP3564_RS02190 PF00596 Class II Aldolase and Adducin N-terminal domain AP3564_RS02215 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AP3564_RS02220 PF01435 Peptidase family M48 AP3564_RS02225 PF07690 Major Facilitator Superfamily AP3564_RS02245 PF07739 TipAS antibiotic-recognition domain AP3564_RS02245 PF13411 MerR HTH family regulatory protein AP3564_RS02260 PF02525 Flavodoxin-like fold AP3564_RS02280 PF01053 Cys/Met metabolism PLP-dependent enzyme AP3564_RS02285 PF03992 Antibiotic biosynthesis monooxygenase AP3564_RS02290 PF01758 Sodium Bile acid symporter family AP3564_RS02305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS02305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS02305 PF01842 ACT domain AP3564_RS02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS02325 PF03466 LysR substrate binding domain AP3564_RS02330 PF07690 Major Facilitator Superfamily AP3564_RS02335 PF04960 Glutaminase AP3564_RS02345 PF13180 PDZ domain AP3564_RS02350 PF07690 Major Facilitator Superfamily AP3564_RS02355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP3564_RS02355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP3564_RS02355 PF00205 Thiamine pyrophosphate enzyme, central domain AP3564_RS02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS02360 PF03466 LysR substrate binding domain AP3564_RS02365 PF03741 Integral membrane protein TerC family AP3564_RS02375 PF00696 Amino acid kinase family AP3564_RS02375 PF01472 PUA domain AP3564_RS02380 PF00171 Aldehyde dehydrogenase family AP3564_RS02395 PF02631 RecX family AP3564_RS02400 PF08838 Protein of unknown function (DUF1811) AP3564_RS02410 PF08176 Small acid-soluble spore protein K family AP3564_RS02415 PF04307 LexA-binding, inner membrane-associated putative hydrolase AP3564_RS02420 PF00730 HhH-GPD superfamily base excision DNA repair protein AP3564_RS02420 PF14815 NUDIX domain AP3564_RS02435 PF04259 Small, acid-soluble spore protein, gamma-type AP3564_RS02440 PF02673 Bacitracin resistance protein BacA AP3564_RS02450 PF04167 Protein of unknown function (DUF402) AP3564_RS02455 PF00005 ABC transporter AP3564_RS02455 PF00664 ABC transporter transmembrane region AP3564_RS02465 PF06081 Aromatic acid exporter family member 1 AP3564_RS02470 PF00202 Aminotransferase class-III AP3564_RS02475 PF00005 ABC transporter AP3564_RS02490 PF07885 Ion channel AP3564_RS02495 PF00578 AhpC/TSA family AP3564_RS02500 PF01475 Ferric uptake regulator family AP3564_RS02505 PF11023 Zinc-ribbon containing domain AP3564_RS02605 PF00589 Phage integrase family AP3564_RS02605 PF02899 Phage integrase, N-terminal SAM-like domain AP3564_RS02630 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AP3564_RS02630 PF01266 FAD dependent oxidoreductase AP3564_RS02635 PF04309 Glycerol-3-phosphate responsive antiterminator AP3564_RS02640 PF02954 Bacterial regulatory protein, Fis family AP3564_RS02640 PF00989 PAS fold AP3564_RS02640 PF00158 Sigma-54 interaction domain AP3564_RS02645 PF02733 Dak1 domain AP3564_RS02650 PF02734 DAK2 domain AP3564_RS02655 PF05524 PEP-utilising enzyme, N-terminal AP3564_RS02655 PF00391 PEP-utilising enzyme, mobile domain AP3564_RS02655 PF03610 PTS system fructose IIA component AP3564_RS02655 PF00381 PTS HPr component phosphorylation site AP3564_RS02660 PF00381 PTS HPr component phosphorylation site AP3564_RS02670 PF00230 Major intrinsic protein AP3564_RS02675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS02675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS02695 PF01965 DJ-1/PfpI family AP3564_RS02700 PF02082 Transcriptional regulator AP3564_RS02710 PF00296 Luciferase-like monooxygenase AP3564_RS02715 PF13460 NAD(P)H-binding AP3564_RS02735 PF04261 Dyp-type peroxidase family AP3564_RS02735 PF10518 TAT (twin-arginine translocation) pathway signal sequence AP3564_RS02740 PF09375 Imelysin AP3564_RS02745 PF01590 GAF domain AP3564_RS02745 PF00158 Sigma-54 interaction domain AP3564_RS02745 PF02954 Bacterial regulatory protein, Fis family AP3564_RS02750 PF00676 Dehydrogenase E1 component AP3564_RS02755 PF02779 Transketolase, pyrimidine binding domain AP3564_RS02755 PF02780 Transketolase, C-terminal domain AP3564_RS02760 PF00364 Biotin-requiring enzyme AP3564_RS02760 PF02817 e3 binding domain AP3564_RS02760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS02765 PF00072 Response regulator receiver domain AP3564_RS02765 PF02954 Bacterial regulatory protein, Fis family AP3564_RS02765 PF00158 Sigma-54 interaction domain AP3564_RS02770 PF08447 PAS fold AP3564_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS02770 PF08448 PAS fold AP3564_RS02780 PF00171 Aldehyde dehydrogenase family AP3564_RS02785 PF00107 Zinc-binding dehydrogenase AP3564_RS02785 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS02790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS02790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS02795 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS02800 PF07690 Major Facilitator Superfamily AP3564_RS02810 PF00455 DeoR C terminal sensor domain AP3564_RS02810 PF08220 DeoR-like helix-turn-helix domain AP3564_RS02815 PF03358 NADPH-dependent FMN reductase AP3564_RS02820 PF13649 Methyltransferase domain AP3564_RS02835 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS02855 PF08331 Domain of unknown function (DUF1730) AP3564_RS02860 PF12671 Putative amidase domain AP3564_RS02865 PF00588 SpoU rRNA Methylase family AP3564_RS02870 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS02875 PF08298 PrkA AAA domain AP3564_RS02875 PF06798 PrkA serine protein kinase C-terminal domain AP3564_RS02880 PF04285 Protein of unknown function (DUF444) AP3564_RS02885 PF02096 60Kd inner membrane protein AP3564_RS02895 PF02632 BioY family AP3564_RS02900 PF00501 AMP-binding enzyme AP3564_RS02900 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS02905 PF00108 Thiolase, N-terminal domain AP3564_RS02905 PF02803 Thiolase, C-terminal domain AP3564_RS02910 PF09335 SNARE associated Golgi protein AP3564_RS02920 PF02525 Flavodoxin-like fold AP3564_RS02925 PF00248 Aldo/keto reductase family AP3564_RS02935 PF02600 Disulfide bond formation protein DsbB AP3564_RS02940 PF00571 CBS domain AP3564_RS02945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP3564_RS02945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP3564_RS02945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP3564_RS02945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP3564_RS02950 PF14148 YhdB-like protein AP3564_RS02955 PF02082 Transcriptional regulator AP3564_RS02960 PF00970 Oxidoreductase FAD-binding domain AP3564_RS02960 PF00042 Globin AP3564_RS02960 PF00175 Oxidoreductase NAD-binding domain AP3564_RS02965 PF04293 SpoVR like protein AP3564_RS02970 PF03741 Integral membrane protein TerC family AP3564_RS02985 PF01594 AI-2E family transporter AP3564_RS02990 PF01594 AI-2E family transporter AP3564_RS03000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AP3564_RS03005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AP3564_RS03015 PF00268 Ribonucleotide reductase, small chain AP3564_RS03020 PF03477 ATP cone domain AP3564_RS03020 PF02867 Ribonucleotide reductase, barrel domain AP3564_RS03020 PF00317 Ribonucleotide reductase, all-alpha domain AP3564_RS03025 PF00011 Hsp20/alpha crystallin family AP3564_RS03045 PF00005 ABC transporter AP3564_RS03045 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP3564_RS03050 PF00005 ABC transporter AP3564_RS03060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS03070 PF00269 Small, acid-soluble spore proteins, alpha/beta type AP3564_RS03085 PF14398 YheC/D like ATP-grasp AP3564_RS03090 PF14398 YheC/D like ATP-grasp AP3564_RS03095 PF14398 YheC/D like ATP-grasp AP3564_RS03105 PF04286 Protein of unknown function (DUF445) AP3564_RS03110 PF03323 Bacillus/Clostridium GerA spore germination protein AP3564_RS03125 PF05504 Spore germination B3/ GerAC like, C-terminal AP3564_RS03130 PF06133 Control of competence regulator ComK, YlbF/YmcA AP3564_RS03135 PF01272 Transcription elongation factor, GreA/GreB, C-term AP3564_RS03135 PF03449 Transcription elongation factor, N-terminal AP3564_RS03140 PF00480 ROK family AP3564_RS03140 PF01325 Iron dependent repressor, N-terminal DNA binding domain AP3564_RS03150 PF04055 Radical SAM superfamily AP3564_RS03165 PF00149 Calcineurin-like phosphoesterase AP3564_RS03170 PF13514 AAA domain AP3564_RS03175 PF01966 HD domain AP3564_RS03180 PF14147 Sporulation protein YhaL AP3564_RS03185 PF05698 Bacterial trigger factor protein (TF) C-terminus AP3564_RS03200 PF08963 Protein of unknown function (DUF1878) AP3564_RS03205 PF01047 MarR family AP3564_RS03210 PF12732 YtxH-like protein AP3564_RS03220 PF17099 Tryptophan transporter TrpP AP3564_RS03225 PF00266 Aminotransferase class-V AP3564_RS03230 PF01230 HIT domain AP3564_RS03235 PF05975 Bacterial ABC transporter protein EcsB AP3564_RS03240 PF00005 ABC transporter AP3564_RS03245 PF03992 Antibiotic biosynthesis monooxygenase AP3564_RS03250 PF00912 Transglycosylase AP3564_RS03250 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS03255 PF01208 Uroporphyrinogen decarboxylase (URO-D) AP3564_RS03260 PF00762 Ferrochelatase AP3564_RS03265 PF01593 Flavin containing amine oxidoreductase AP3564_RS03270 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS03275 PF14149 YhfH-like protein AP3564_RS03280 PF12706 Beta-lactamase superfamily domain AP3564_RS03290 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS03295 PF00005 ABC transporter AP3564_RS03300 PF07883 Cupin domain AP3564_RS03300 PF01381 Helix-turn-helix AP3564_RS03305 PF03591 AzlC protein AP3564_RS03315 PF16491 CAAX prenyl protease N-terminal, five membrane helices AP3564_RS03315 PF01435 Peptidase family M48 AP3564_RS03320 PF17854 FtsK alpha domain AP3564_RS03320 PF01580 FtsK/SpoIIIE family AP3564_RS03320 PF09397 Ftsk gamma domain AP3564_RS03325 PF01225 Mur ligase family, catalytic domain AP3564_RS03325 PF02875 Mur ligase family, glutamate ligase domain AP3564_RS03325 PF08245 Mur ligase middle domain AP3564_RS03330 PF02073 Thermophilic metalloprotease (M29) AP3564_RS03335 PF06103 Bacterial protein of unknown function (DUF948) AP3564_RS03350 PF00793 DAHP synthetase I family AP3564_RS03350 PF01817 Chorismate mutase type II AP3564_RS03355 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS03360 PF00850 Histone deacetylase domain AP3564_RS03365 PF00571 CBS domain AP3564_RS03370 PF00583 Acetyltransferase (GNAT) family AP3564_RS03375 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS03375 PF00501 AMP-binding enzyme AP3564_RS03380 PF00583 Acetyltransferase (GNAT) family AP3564_RS03385 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS03385 PF00912 Transglycosylase AP3564_RS03390 PF00579 tRNA synthetases class I (W and Y) AP3564_RS03390 PF01479 S4 domain AP3564_RS03395 PF05593 RHS Repeat AP3564_RS03415 PF05593 RHS Repeat AP3564_RS03435 PF05593 RHS Repeat AP3564_RS03445 PF05593 RHS Repeat AP3564_RS03475 PF05593 RHS Repeat AP3564_RS03480 PF05593 RHS Repeat AP3564_RS03540 PF09299 Mu transposase, C-terminal AP3564_RS03540 PF00665 Integrase core domain AP3564_RS03550 PF05593 RHS Repeat AP3564_RS03620 PF01418 Helix-turn-helix domain, rpiR family AP3564_RS03620 PF01380 SIS domain AP3564_RS03630 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS03630 PF00107 Zinc-binding dehydrogenase AP3564_RS03635 PF01791 DeoC/LacD family aldolase AP3564_RS03640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS03640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS03660 PF01969 Protein of unknown function DUF111 AP3564_RS03665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS03665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS03680 PF02219 Methylenetetrahydrofolate reductase AP3564_RS03680 PF02574 Homocysteine S-methyltransferase AP3564_RS03705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AP3564_RS03710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AP3564_RS03710 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AP3564_RS03715 PF03480 Bacterial extracellular solute-binding protein, family 7 AP3564_RS03725 PF00107 Zinc-binding dehydrogenase AP3564_RS03725 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS03730 PF01791 DeoC/LacD family aldolase AP3564_RS03735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS03735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS03745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS03745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS03755 PF04321 RmlD substrate binding domain AP3564_RS03760 PF16363 GDP-mannose 4,6 dehydratase AP3564_RS03765 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AP3564_RS03770 PF00483 Nucleotidyl transferase AP3564_RS03780 PF00535 Glycosyl transferase family 2 AP3564_RS03820 PF00107 Zinc-binding dehydrogenase AP3564_RS03820 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS03830 PF07940 Heparinase II/III-like protein AP3564_RS03830 PF16889 Heparinase II/III N-terminus AP3564_RS03835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AP3564_RS03835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AP3564_RS03835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AP3564_RS03840 PF02397 Bacterial sugar transferase AP3564_RS03845 PF00483 Nucleotidyl transferase AP3564_RS03855 PF13614 AAA domain AP3564_RS03860 PF13807 G-rich domain on putative tyrosine kinase AP3564_RS03860 PF02706 Chain length determinant protein AP3564_RS03865 PF04434 SWIM zinc finger AP3564_RS03870 PF00176 SNF2 family N-terminal domain AP3564_RS03870 PF12419 SNF2 Helicase protein AP3564_RS03870 PF00271 Helicase conserved C-terminal domain AP3564_RS03875 PF00436 Single-strand binding protein family AP3564_RS03885 PF01381 Helix-turn-helix AP3564_RS03890 PF14183 YwpF-like protein AP3564_RS03900 PF07977 FabA-like domain AP3564_RS03910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AP3564_RS03910 PF00460 Flagella basal body rod protein AP3564_RS03915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AP3564_RS03915 PF00460 Flagella basal body rod protein AP3564_RS03930 PF12116 Stage III sporulation protein D AP3564_RS03940 PF02626 Carboxyltransferase domain, subdomain A and B AP3564_RS03945 PF03746 LamB/YcsF family AP3564_RS03950 PF02682 Carboxyltransferase domain, subdomain C and D AP3564_RS03955 PF00583 Acetyltransferase (GNAT) family AP3564_RS03960 PF01551 Peptidase family M23 AP3564_RS03970 PF08486 Stage II sporulation protein AP3564_RS03975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AP3564_RS03980 PF08680 TATA-box binding AP3564_RS03985 PF06612 Protein of unknown function (DUF1146) AP3564_RS03990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AP3564_RS03990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AP3564_RS03995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AP3564_RS03995 PF02874 ATP synthase alpha/beta family, beta-barrel domain AP3564_RS04000 PF00231 ATP synthase AP3564_RS04005 PF00306 ATP synthase alpha/beta chain, C terminal domain AP3564_RS04005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AP3564_RS04005 PF02874 ATP synthase alpha/beta family, beta-barrel domain AP3564_RS04010 PF00213 ATP synthase delta (OSCP) subunit AP3564_RS04015 PF00430 ATP synthase B/B' CF(0) AP3564_RS04020 PF00137 ATP synthase subunit C AP3564_RS04025 PF00119 ATP synthase A chain AP3564_RS04030 PF03899 ATP synthase I chain AP3564_RS04040 PF02225 PA domain AP3564_RS04040 PF13860 FlgD Ig-like domain AP3564_RS04040 PF00082 Subtilase family AP3564_RS04040 PF05922 Peptidase inhibitor I9 AP3564_RS04055 PF00464 Serine hydroxymethyltransferase AP3564_RS04060 PF04260 Protein of unknown function (DUF436) AP3564_RS04065 PF02502 Ribose/Galactose Isomerase AP3564_RS04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS04070 PF00672 HAMP domain AP3564_RS04070 PF02743 Cache domain AP3564_RS04075 PF01451 Low molecular weight phosphotyrosine protein phosphatase AP3564_RS04080 PF02659 Putative manganese efflux pump AP3564_RS04085 PF01300 Telomere recombination AP3564_RS04085 PF03481 Putative GTP-binding controlling metal-binding AP3564_RS04095 PF09551 Stage II sporulation protein R (spore_II_R) AP3564_RS04100 PF17827 PrmC N-terminal domain AP3564_RS04100 PF13847 Methyltransferase domain AP3564_RS04105 PF03462 PCRF domain AP3564_RS04105 PF00472 RF-1 domain AP3564_RS04110 PF13411 MerR HTH family regulatory protein AP3564_RS04120 PF00265 Thymidine kinase AP3564_RS04125 PF01197 Ribosomal protein L31 AP3564_RS04130 PF07497 Rho termination factor, RNA-binding domain AP3564_RS04130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AP3564_RS04130 PF07498 Rho termination factor, N-terminal domain AP3564_RS04135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AP3564_RS04140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AP3564_RS04145 PF00923 Transaldolase/Fructose-6-phosphate aldolase AP3564_RS04150 PF01116 Fructose-bisphosphate aldolase class-II AP3564_RS04155 PF00072 Response regulator receiver domain AP3564_RS04160 PF10740 Domain of unknown function (DUF2529) AP3564_RS04165 PF00117 Glutamine amidotransferase class-I AP3564_RS04165 PF06418 CTP synthase N-terminus AP3564_RS04170 PF05066 HB1, ASXL, restriction endonuclease HTH domain AP3564_RS04175 PF13183 4Fe-4S dicluster domain AP3564_RS04175 PF02754 Cysteine-rich domain AP3564_RS04180 PF04542 Sigma-70 region 2 AP3564_RS04180 PF08281 Sigma-70, region 4 AP3564_RS04185 PF03485 Arginyl tRNA synthetase N terminal domain AP3564_RS04185 PF00750 tRNA synthetases class I (R) AP3564_RS04185 PF05746 DALR anticodon binding domain AP3564_RS04190 PF09148 Domain of unknown function (DUF1934) AP3564_RS04195 PF00491 Arginase family AP3564_RS04200 PF17284 Spermidine synthase tetramerisation domain AP3564_RS04205 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS04205 PF00912 Transglycosylase AP3564_RS04210 PF03099 Biotin/lipoate A/B protein ligase family AP3564_RS04215 PF08000 Bacterial PH domain AP3564_RS04215 PF11724 YvbH-like oligomerisation region AP3564_RS04225 PF07293 Protein of unknown function (DUF1450) AP3564_RS04230 PF01966 HD domain AP3564_RS04240 PF02163 Peptidase family M50 AP3564_RS04245 PF08741 YwhD family AP3564_RS04250 PF01515 Phosphate acetyl/butaryl transferase AP3564_RS04255 PF06778 Chlorite dismutase AP3564_RS04260 PF07486 Cell Wall Hydrolase AP3564_RS04265 PF09671 Spore coat protein (Spore_GerQ) AP3564_RS04275 PF00115 Cytochrome C and Quinol oxidase polypeptide I AP3564_RS04280 PF09125 Cytochrome C oxidase subunit II, transmembrane AP3564_RS04280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AP3564_RS04285 PF04241 Protein of unknown function (DUF423) AP3564_RS04290 PF17261 Family of unknown function (DUF5327) AP3564_RS04295 PF17284 Spermidine synthase tetramerisation domain AP3564_RS04315 PF03167 Uracil DNA glycosylase superfamily AP3564_RS04330 PF18665 Tetracyclin repressor-like, C-terminal domain AP3564_RS04330 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS04335 PF08543 Phosphomethylpyrimidine kinase AP3564_RS04340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AP3564_RS04340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AP3564_RS04340 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AP3564_RS04345 PF03009 Glycerophosphoryl diester phosphodiesterase family AP3564_RS04355 PF12105 SpoU, rRNA methylase, C-terminal AP3564_RS04355 PF00588 SpoU rRNA Methylase family AP3564_RS04360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AP3564_RS04365 PF00510 Cytochrome c oxidase subunit III AP3564_RS04370 PF00115 Cytochrome C and Quinol oxidase polypeptide I AP3564_RS04375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AP3564_RS04380 PF00881 Nitroreductase family AP3564_RS04385 PF01717 Cobalamin-independent synthase, Catalytic domain AP3564_RS04385 PF08267 Cobalamin-independent synthase, N-terminal domain AP3564_RS04390 PF02581 Thiamine monophosphate synthase AP3564_RS04395 PF02110 Hydroxyethylthiazole kinase family AP3564_RS04400 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP3564_RS04405 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS04410 PF00005 ABC transporter AP3564_RS04425 PF13419 Haloacid dehalogenase-like hydrolase AP3564_RS04440 PF04264 YceI-like domain AP3564_RS04445 PF01717 Cobalamin-independent synthase, Catalytic domain AP3564_RS04455 PF00005 ABC transporter AP3564_RS04460 PF00005 ABC transporter AP3564_RS04460 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP3564_RS04470 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS04475 PF13458 Periplasmic binding protein AP3564_RS04480 PF01261 Xylose isomerase-like TIM barrel AP3564_RS04485 PF04203 Sortase domain AP3564_RS04490 PF00364 Biotin-requiring enzyme AP3564_RS04490 PF02817 e3 binding domain AP3564_RS04490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS04495 PF02780 Transketolase, C-terminal domain AP3564_RS04495 PF02779 Transketolase, pyrimidine binding domain AP3564_RS04500 PF00676 Dehydrogenase E1 component AP3564_RS04505 PF00158 Sigma-54 interaction domain AP3564_RS04505 PF13426 PAS domain AP3564_RS04505 PF02954 Bacterial regulatory protein, Fis family AP3564_RS04530 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS04540 PF00005 ABC transporter AP3564_RS04550 PF00149 Calcineurin-like phosphoesterase AP3564_RS04550 PF02872 5'-nucleotidase, C-terminal domain AP3564_RS04570 PF00583 Acetyltransferase (GNAT) family AP3564_RS04575 PF00583 Acetyltransferase (GNAT) family AP3564_RS04575 PF00795 Carbon-nitrogen hydrolase AP3564_RS04580 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS04580 PF00072 Response regulator receiver domain AP3564_RS04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS04590 PF00005 ABC transporter AP3564_RS04600 PF13460 NAD(P)H-binding AP3564_RS04605 PF02082 Transcriptional regulator AP3564_RS04610 PF08664 YcbB domain AP3564_RS04610 PF00072 Response regulator receiver domain AP3564_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS04620 PF00375 Sodium:dicarboxylate symporter family AP3564_RS04625 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS04635 PF00005 ABC transporter AP3564_RS04640 PF13454 FAD-NAD(P)-binding AP3564_RS04655 PF03061 Thioesterase superfamily AP3564_RS04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS04665 PF03466 LysR substrate binding domain AP3564_RS04690 PF13538 UvrD-like helicase C-terminal domain AP3564_RS04695 PF00056 lactate/malate dehydrogenase, NAD binding domain AP3564_RS04695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AP3564_RS04705 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS04705 PF16736 Single Cache-like AP3564_RS04705 PF00989 PAS fold AP3564_RS04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS04725 PF11867 Domain of unknown function (DUF3387) AP3564_RS04725 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP3564_RS04725 PF18766 SWI2/SNF2 ATPase AP3564_RS04730 PF01420 Type I restriction modification DNA specificity domain AP3564_RS04735 PF02384 N-6 DNA Methylase AP3564_RS04750 PF08220 DeoR-like helix-turn-helix domain AP3564_RS04750 PF00455 DeoR C terminal sensor domain AP3564_RS04760 PF01571 Aminomethyltransferase folate-binding domain AP3564_RS04760 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP3564_RS04760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS04760 PF17806 Sarcosine oxidase A3 domain AP3564_RS04765 PF01266 FAD dependent oxidoreductase AP3564_RS04770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS04770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS04775 PF04346 Ethanolamine utilisation protein, EutH AP3564_RS04785 PF00455 DeoR C terminal sensor domain AP3564_RS04785 PF08220 DeoR-like helix-turn-helix domain AP3564_RS04815 PF02590 Predicted SPOUT methyltransferase AP3564_RS04825 PF13180 PDZ domain AP3564_RS04830 PF00753 Metallo-beta-lactamase superfamily AP3564_RS04835 PF09648 YycH protein AP3564_RS04845 PF00672 HAMP domain AP3564_RS04845 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS04845 PF13426 PAS domain AP3564_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS04850 PF00072 Response regulator receiver domain AP3564_RS04850 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS04865 PF00709 Adenylosuccinate synthetase AP3564_RS04870 PF03796 DnaB-like helicase C terminal domain AP3564_RS04870 PF00772 DnaB-like helicase N terminal domain AP3564_RS04875 PF03948 Ribosomal protein L9, C-terminal domain AP3564_RS04875 PF01281 Ribosomal protein L9, N-terminal domain AP3564_RS04880 PF02272 DHHA1 domain AP3564_RS04880 PF01368 DHH family AP3564_RS04885 PF09991 Predicted membrane protein (DUF2232) AP3564_RS04890 PF01084 Ribosomal protein S18 AP3564_RS04895 PF00436 Single-strand binding protein family AP3564_RS04900 PF01250 Ribosomal protein S6 AP3564_RS04905 PF06071 Protein of unknown function (DUF933) AP3564_RS04905 PF01926 50S ribosome-binding GTPase AP3564_RS04910 PF06107 Bacterial protein of unknown function (DUF951) AP3564_RS04915 PF06866 Protein of unknown function (DUF1256) AP3564_RS04920 PF17762 HTH domain found in ParB protein AP3564_RS04920 PF02195 ParB-like nuclease domain AP3564_RS04925 PF13614 AAA domain AP3564_RS04935 PF02195 ParB-like nuclease domain AP3564_RS04935 PF17762 HTH domain found in ParB protein AP3564_RS04940 PF02527 rRNA small subunit methyltransferase G AP3564_RS04945 PF01134 Glucose inhibited division protein A AP3564_RS04945 PF13932 GidA associated domain AP3564_RS04950 PF10396 GTP-binding protein TrmE N-terminus AP3564_RS04950 PF12631 MnmE helical domain AP3564_RS04950 PF01926 50S ribosome-binding GTPase AP3564_RS04955 PF01424 R3H domain AP3564_RS04955 PF14804 Jag N-terminus AP3564_RS04960 PF02096 60Kd inner membrane protein AP3564_RS04965 PF00825 Ribonuclease P AP3564_RS04970 PF00468 Ribosomal protein L34 AP3564_RS04980 PF11638 DnaA N-terminal domain AP3564_RS04980 PF08299 Bacterial dnaA protein helix-turn-helix AP3564_RS04980 PF00308 Bacterial dnaA protein AP3564_RS04985 PF00712 DNA polymerase III beta subunit, N-terminal domain AP3564_RS04985 PF02767 DNA polymerase III beta subunit, central domain AP3564_RS04985 PF02768 DNA polymerase III beta subunit, C-terminal domain AP3564_RS04995 PF02463 RecF/RecN/SMC N terminal domain AP3564_RS05000 PF00204 DNA gyrase B AP3564_RS05000 PF00986 DNA gyrase B subunit, carboxyl terminus AP3564_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS05000 PF01751 Toprim domain AP3564_RS05005 PF00521 DNA gyrase/topoisomerase IV, subunit A AP3564_RS05005 PF03989 DNA gyrase C-terminal domain, beta-propeller AP3564_RS05010 PF01966 HD domain AP3564_RS05010 PF00072 Response regulator receiver domain AP3564_RS05040 PF14175 YaaC-like Protein AP3564_RS05045 PF00478 IMP dehydrogenase / GMP reductase domain AP3564_RS05045 PF00571 CBS domain AP3564_RS05050 PF07943 Penicillin-binding protein 5, C-terminal domain AP3564_RS05050 PF00768 D-alanyl-D-alanine carboxypeptidase AP3564_RS05060 PF01680 SOR/SNZ family AP3564_RS05065 PF01174 SNO glutamine amidotransferase family AP3564_RS05070 PF02403 Seryl-tRNA synthetase N-terminal domain AP3564_RS05070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP3564_RS05080 PF01266 FAD dependent oxidoreductase AP3564_RS05100 PF01476 LysM domain AP3564_RS05100 PF00704 Glycosyl hydrolases family 18 AP3564_RS05105 PF14437 MafB19-like deaminase AP3564_RS05115 PF12169 DNA polymerase III subunits gamma and tau domain III AP3564_RS05120 PF02575 YbaB/EbfC DNA-binding family AP3564_RS05125 PF02132 RecR protein AP3564_RS05125 PF13662 Toprim domain AP3564_RS05130 PF10704 Protein of unknown function (DUF2508) AP3564_RS05135 PF07441 SigmaK-factor processing regulatory protein BofA AP3564_RS05155 PF10764 Inhibitor of sigma-G Gin AP3564_RS05160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AP3564_RS05160 PF01276 Orn/Lys/Arg decarboxylase, major domain AP3564_RS05165 PF02223 Thymidylate kinase AP3564_RS05170 PF06153 Cyclic-di-AMP receptor AP3564_RS05175 PF03885 Protein of unknown function (DUF327) AP3564_RS05180 PF09115 DNA polymerase III, delta subunit, C terminal AP3564_RS05185 PF04468 PSP1 C-terminal conserved region AP3564_RS05190 PF06156 Initiation control protein YabA AP3564_RS05195 PF05175 Methyltransferase small domain AP3564_RS05200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP3564_RS05205 PF18277 AbrB C-terminal domain AP3564_RS05205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AP3564_RS05210 PF09334 tRNA synthetases class I (M) AP3564_RS05210 PF08264 Anticodon-binding domain of tRNA AP3564_RS05210 PF01588 Putative tRNA binding domain AP3564_RS05215 PF01026 TatD related DNase AP3564_RS05220 PF07501 G5 domain AP3564_RS05220 PF03990 G5-linked-Ubiquitin-like domain AP3564_RS05220 PF06725 3D domain AP3564_RS05225 PF13331 Domain of unknown function (DUF4093) AP3564_RS05225 PF13662 Toprim domain AP3564_RS05230 PF00398 Ribosomal RNA adenine dimethylase AP3564_RS05235 PF05582 YabG peptidase U57 AP3564_RS05240 PF06257 Biofilm formation stimulator VEG AP3564_RS05245 PF00269 Small, acid-soluble spore proteins, alpha/beta type AP3564_RS05250 PF00288 GHMP kinases N terminal domain AP3564_RS05250 PF08544 GHMP kinases C terminal AP3564_RS05255 PF00156 Phosphoribosyl transferase domain AP3564_RS05255 PF09182 Bacterial purine repressor, N-terminal AP3564_RS05260 PF01042 Endoribonuclease L-PSP AP3564_RS05265 PF04026 SpoVG AP3564_RS05270 PF00483 Nucleotidyl transferase AP3564_RS05270 PF00132 Bacterial transferase hexapeptide (six repeats) AP3564_RS05275 PF14572 Phosphoribosyl synthetase-associated domain AP3564_RS05275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AP3564_RS05280 PF14693 Ribosomal protein TL5, C-terminal domain AP3564_RS05280 PF01386 Ribosomal L25p family AP3564_RS05285 PF01195 Peptidyl-tRNA hydrolase AP3564_RS05290 PF10955 Protein of unknown function (DUF2757) AP3564_RS05295 PF03461 TRCF domain AP3564_RS05295 PF02559 CarD-like/TRCF domain AP3564_RS05295 PF00270 DEAD/DEAH box helicase AP3564_RS05295 PF17757 UvrB interaction domain AP3564_RS05295 PF00271 Helicase conserved C-terminal domain AP3564_RS05300 PF15714 Stage V sporulation protein T C-terminal, transcription factor AP3564_RS05300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AP3564_RS05330 PF12323 Helix-turn-helix domain AP3564_RS05330 PF01385 Probable transposase AP3564_RS05330 PF07282 Putative transposase DNA-binding domain AP3564_RS05335 PF01943 Polysaccharide biosynthesis protein AP3564_RS05335 PF14667 Polysaccharide biosynthesis C-terminal domain AP3564_RS05340 PF03819 MazG nucleotide pyrophosphohydrolase domain AP3564_RS05340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP3564_RS05345 PF01479 S4 domain AP3564_RS05350 PF07873 YabP family AP3564_RS05355 PF09578 Spore cortex protein YabQ (Spore_YabQ) AP3564_RS05360 PF04977 Septum formation initiator AP3564_RS05365 PF00575 S1 RNA binding domain AP3564_RS05380 PF07228 Stage II sporulation protein E (SpoIIE) AP3564_RS05385 PF00092 von Willebrand factor type A domain AP3564_RS05390 PF00069 Protein kinase domain AP3564_RS05395 PF01171 PP-loop family AP3564_RS05395 PF11734 TilS substrate C-terminal domain AP3564_RS05395 PF09179 TilS substrate binding domain AP3564_RS05400 PF00156 Phosphoribosyl transferase domain AP3564_RS05405 PF01434 Peptidase family M41 AP3564_RS05405 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS05405 PF06480 FtsH Extracellular AP3564_RS05405 PF17862 AAA+ lid domain AP3564_RS05410 PF03309 Type III pantothenate kinase AP3564_RS05415 PF01430 Hsp33 protein AP3564_RS05420 PF13145 PPIC-type PPIASE domain AP3564_RS05425 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS05430 PF00425 chorismate binding enzyme AP3564_RS05430 PF04715 Anthranilate synthase component I, N terminal region AP3564_RS05435 PF00117 Glutamine amidotransferase class-I AP3564_RS05440 PF01063 Amino-transferase class IV AP3564_RS05445 PF00809 Pterin binding enzyme AP3564_RS05450 PF02152 Dihydroneopterin aldolase AP3564_RS05455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AP3564_RS05460 PF01381 Helix-turn-helix AP3564_RS05465 PF01207 Dihydrouridine synthase (Dus) AP3564_RS05470 PF00152 tRNA synthetases class II (D, K and N) AP3564_RS05470 PF01336 OB-fold nucleic acid binding domain AP3564_RS05475 PF01609 Transposase DDE domain AP3564_RS05565 PF01446 Replication protein AP3564_RS05575 PF00005 ABC transporter AP3564_RS05575 PF13732 Domain of unknown function (DUF4162) AP3564_RS05595 PF13005 zinc-finger binding domain of transposase IS66 AP3564_RS05595 PF13007 Transposase C of IS166 homeodomain AP3564_RS05595 PF13817 IS66 C-terminal element AP3564_RS05595 PF03050 Transposase IS66 family AP3564_RS05630 PF01478 Type IV leader peptidase family AP3564_RS05630 PF06750 Bacterial Peptidase A24 N-terminal domain AP3564_RS05655 PF00482 Type II secretion system (T2SS), protein F AP3564_RS05660 PF00437 Type II/IV secretion system protein AP3564_RS05665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AP3564_RS05665 PF00437 Type II/IV secretion system protein AP3564_RS05690 PF02308 MgtC family AP3564_RS05695 PF05848 CtsR N-terminal HTH domain AP3564_RS05695 PF17727 CtsR C-terminal dimerization domain AP3564_RS05700 PF02151 UvrB/uvrC motif AP3564_RS05705 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AP3564_RS05710 PF02861 Clp amino terminal domain, pathogenicity island component AP3564_RS05710 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS05710 PF07724 AAA domain (Cdc48 subfamily) AP3564_RS05710 PF17871 AAA lid domain AP3564_RS05710 PF10431 C-terminal, D2-small domain, of ClpB protein AP3564_RS05715 PF18073 Rubredoxin metal binding domain AP3564_RS05720 PF02457 DisA bacterial checkpoint controller nucleotide-binding AP3564_RS05720 PF10635 DisA bacterial checkpoint controller linker region AP3564_RS05730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AP3564_RS05735 PF02542 YgbB family AP3564_RS05740 PF00749 tRNA synthetases class I (E and Q), catalytic domain AP3564_RS05745 PF00132 Bacterial transferase hexapeptide (six repeats) AP3564_RS05745 PF06426 Serine acetyltransferase, N-terminal AP3564_RS05750 PF01406 tRNA synthetases class I (C) catalytic domain AP3564_RS05750 PF09190 DALR domain AP3564_RS05755 PF00636 Ribonuclease III domain AP3564_RS05760 PF00588 SpoU rRNA Methylase family AP3564_RS05760 PF08032 RNA 2'-O ribose methyltransferase substrate binding AP3564_RS05765 PF05991 YacP-like NYN domain AP3564_RS05770 PF08281 Sigma-70, region 4 AP3564_RS05770 PF04542 Sigma-70 region 2 AP3564_RS05775 PF00471 Ribosomal protein L33 AP3564_RS05780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AP3564_RS05785 PF00467 KOW motif AP3564_RS05785 PF02357 Transcription termination factor nusG AP3564_RS05790 PF00298 Ribosomal protein L11, RNA binding domain AP3564_RS05790 PF03946 Ribosomal protein L11, N-terminal domain AP3564_RS05795 PF00687 Ribosomal protein L1p/L10e family AP3564_RS05800 PF00466 Ribosomal protein L10 AP3564_RS05805 PF16320 Ribosomal protein L7/L12 dimerisation domain AP3564_RS05805 PF00542 Ribosomal protein L7/L12 C-terminal domain AP3564_RS05810 PF05175 Methyltransferase small domain AP3564_RS05815 PF00562 RNA polymerase Rpb2, domain 6 AP3564_RS05815 PF10385 RNA polymerase beta subunit external 1 domain AP3564_RS05815 PF04560 RNA polymerase Rpb2, domain 7 AP3564_RS05815 PF04565 RNA polymerase Rpb2, domain 3 AP3564_RS05815 PF04561 RNA polymerase Rpb2, domain 2 AP3564_RS05815 PF04563 RNA polymerase beta subunit AP3564_RS05820 PF04983 RNA polymerase Rpb1, domain 3 AP3564_RS05820 PF00623 RNA polymerase Rpb1, domain 2 AP3564_RS05820 PF04997 RNA polymerase Rpb1, domain 1 AP3564_RS05820 PF05000 RNA polymerase Rpb1, domain 4 AP3564_RS05820 PF04998 RNA polymerase Rpb1, domain 5 AP3564_RS05825 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AP3564_RS05830 PF00164 Ribosomal protein S12/S23 AP3564_RS05835 PF00177 Ribosomal protein S7p/S5e AP3564_RS05840 PF03144 Elongation factor Tu domain 2 AP3564_RS05840 PF14492 Elongation Factor G, domain II AP3564_RS05840 PF00679 Elongation factor G C-terminus AP3564_RS05840 PF00009 Elongation factor Tu GTP binding domain AP3564_RS05840 PF03764 Elongation factor G, domain IV AP3564_RS05845 PF00009 Elongation factor Tu GTP binding domain AP3564_RS05845 PF03144 Elongation factor Tu domain 2 AP3564_RS05845 PF03143 Elongation factor Tu C-terminal domain AP3564_RS05850 PF00338 Ribosomal protein S10p/S20e AP3564_RS05855 PF00297 Ribosomal protein L3 AP3564_RS05860 PF00573 Ribosomal protein L4/L1 family AP3564_RS05865 PF00276 Ribosomal protein L23 AP3564_RS05870 PF00181 Ribosomal Proteins L2, RNA binding domain AP3564_RS05870 PF03947 Ribosomal Proteins L2, C-terminal domain AP3564_RS05875 PF00203 Ribosomal protein S19 AP3564_RS05880 PF00237 Ribosomal protein L22p/L17e AP3564_RS05885 PF00189 Ribosomal protein S3, C-terminal domain AP3564_RS05885 PF07650 KH domain AP3564_RS05890 PF00252 Ribosomal protein L16p/L10e AP3564_RS05895 PF00831 Ribosomal L29 protein AP3564_RS05900 PF00366 Ribosomal protein S17 AP3564_RS05905 PF00238 Ribosomal protein L14p/L23e AP3564_RS05910 PF00467 KOW motif AP3564_RS05910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AP3564_RS05915 PF00673 ribosomal L5P family C-terminus AP3564_RS05915 PF00281 Ribosomal protein L5 AP3564_RS05920 PF00253 Ribosomal protein S14p/S29e AP3564_RS05925 PF00410 Ribosomal protein S8 AP3564_RS05930 PF00347 Ribosomal protein L6 AP3564_RS05935 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AP3564_RS05940 PF03719 Ribosomal protein S5, C-terminal domain AP3564_RS05940 PF00333 Ribosomal protein S5, N-terminal domain AP3564_RS05945 PF00327 Ribosomal protein L30p/L7e AP3564_RS05950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AP3564_RS05955 PF00344 SecY translocase AP3564_RS05960 PF05191 Adenylate kinase, active site lid AP3564_RS05965 PF00557 Metallopeptidase family M24 AP3564_RS05975 PF01176 Translation initiation factor 1A / IF-1 AP3564_RS05980 PF00444 Ribosomal protein L36 AP3564_RS05985 PF00416 Ribosomal protein S13/S18 AP3564_RS05990 PF00411 Ribosomal protein S11 AP3564_RS05995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AP3564_RS05995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AP3564_RS05995 PF01000 RNA polymerase Rpb3/RpoA insert domain AP3564_RS06000 PF01196 Ribosomal protein L17 AP3564_RS06005 PF00005 ABC transporter AP3564_RS06010 PF00005 ABC transporter AP3564_RS06015 PF02361 Cobalt transport protein AP3564_RS06020 PF01416 tRNA pseudouridine synthase AP3564_RS06025 PF00572 Ribosomal protein L13 AP3564_RS06030 PF00380 Ribosomal protein S9/S16 AP3564_RS06050 PF01609 Transposase DDE domain AP3564_RS06055 PF10460 Peptidase M30 AP3564_RS06060 PF01520 N-acetylmuramoyl-L-alanine amidase AP3564_RS06065 PF10609 NUBPL iron-transfer P-loop NTPase AP3564_RS06070 PF17898 Spore germination GerD central core domain AP3564_RS06075 PF14089 KinB-signalling pathway activation in sporulation AP3564_RS06085 PF01522 Polysaccharide deacetylase AP3564_RS06165 PF13411 MerR HTH family regulatory protein AP3564_RS06165 PF07739 TipAS antibiotic-recognition domain AP3564_RS06170 PF08281 Sigma-70, region 4 AP3564_RS06170 PF04542 Sigma-70 region 2 AP3564_RS06175 PF13490 Putative zinc-finger AP3564_RS06180 PF02457 DisA bacterial checkpoint controller nucleotide-binding AP3564_RS06185 PF07949 YbbR-like protein AP3564_RS06190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP3564_RS06190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP3564_RS06190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP3564_RS06190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP3564_RS06195 PF01380 SIS domain AP3564_RS06210 PF13411 MerR HTH family regulatory protein AP3564_RS06215 PF03471 Transporter associated domain AP3564_RS06215 PF00571 CBS domain AP3564_RS06215 PF01595 Cyclin M transmembrane N-terminal domain AP3564_RS06240 PF00296 Luciferase-like monooxygenase AP3564_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS06245 PF01571 Aminomethyltransferase folate-binding domain AP3564_RS06245 PF17806 Sarcosine oxidase A3 domain AP3564_RS06245 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP3564_RS06265 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS06270 PF00294 pfkB family carbohydrate kinase AP3564_RS06275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AP3564_RS06280 PF01380 SIS domain AP3564_RS06285 PF02615 Malate/L-lactate dehydrogenase AP3564_RS06290 PF03480 Bacterial extracellular solute-binding protein, family 7 AP3564_RS06300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AP3564_RS06305 PF00107 Zinc-binding dehydrogenase AP3564_RS06305 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS06310 PF01081 KDPG and KHG aldolase AP3564_RS06315 PF03786 D-mannonate dehydratase (UxuA) AP3564_RS06320 PF00106 short chain dehydrogenase AP3564_RS06365 PF00324 Amino acid permease AP3564_RS06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS06375 PF03466 LysR substrate binding domain AP3564_RS06380 PF03060 Nitronate monooxygenase AP3564_RS06395 PF01565 FAD binding domain AP3564_RS06395 PF02913 FAD linked oxidases, C-terminal domain AP3564_RS06400 PF13183 4Fe-4S dicluster domain AP3564_RS06400 PF02754 Cysteine-rich domain AP3564_RS06405 PF02913 FAD linked oxidases, C-terminal domain AP3564_RS06405 PF01565 FAD binding domain AP3564_RS06410 PF01274 Malate synthase AP3564_RS06420 PF01614 Bacterial transcriptional regulator AP3564_RS06420 PF09339 IclR helix-turn-helix domain AP3564_RS06425 PF02652 L-lactate permease AP3564_RS06430 PF02583 Metal-sensitive transcriptional repressor AP3564_RS06435 PF01554 MatE AP3564_RS06440 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP3564_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS06450 PF00005 ABC transporter AP3564_RS06475 PF00893 Small Multidrug Resistance protein AP3564_RS06480 PF00893 Small Multidrug Resistance protein AP3564_RS06490 PF06134 L-rhamnose isomerase (RhaA) AP3564_RS06495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS06495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS06500 PF00300 Histidine phosphatase superfamily (branch 1) AP3564_RS06505 PF13407 Periplasmic binding protein domain AP3564_RS06510 PF06580 Histidine kinase AP3564_RS06510 PF00672 HAMP domain AP3564_RS06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS06510 PF02743 Cache domain AP3564_RS06515 PF12833 Helix-turn-helix domain AP3564_RS06520 PF00834 Ribulose-phosphate 3 epimerase family AP3564_RS06525 PF00294 pfkB family carbohydrate kinase AP3564_RS06530 PF00005 ABC transporter AP3564_RS06535 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS06540 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS06545 PF13407 Periplasmic binding protein domain AP3564_RS06570 PF00005 ABC transporter AP3564_RS06575 PF02517 CPBP intramembrane metalloprotease AP3564_RS06580 PF04055 Radical SAM superfamily AP3564_RS06580 PF13186 Iron-sulfur cluster-binding domain AP3564_RS06590 PF00155 Aminotransferase class I and II AP3564_RS06590 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS06595 PF07690 Major Facilitator Superfamily AP3564_RS06610 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AP3564_RS06625 PF00483 Nucleotidyl transferase AP3564_RS06645 PF00933 Glycosyl hydrolase family 3 N terminal domain AP3564_RS06660 PF05525 Branched-chain amino acid transport protein AP3564_RS06670 PF00296 Luciferase-like monooxygenase AP3564_RS06675 PF00296 Luciferase-like monooxygenase AP3564_RS06680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AP3564_RS06680 PF01871 AMMECR1 AP3564_RS06685 PF01361 Tautomerase enzyme AP3564_RS06695 PF00682 HMGL-like AP3564_RS06695 PF07836 DmpG-like communication domain AP3564_RS06700 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AP3564_RS06700 PF01118 Semialdehyde dehydrogenase, NAD binding domain AP3564_RS06705 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS06710 PF00171 Aldehyde dehydrogenase family AP3564_RS06715 PF01614 Bacterial transcriptional regulator AP3564_RS06715 PF09339 IclR helix-turn-helix domain AP3564_RS06725 PF00459 Inositol monophosphatase family AP3564_RS06730 PF07729 FCD domain AP3564_RS06730 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS06735 PF02515 CoA-transferase family III AP3564_RS06745 PF02515 CoA-transferase family III AP3564_RS06750 PF00682 HMGL-like AP3564_RS06770 PF03881 Fructosamine kinase AP3564_RS06775 PF01965 DJ-1/PfpI family AP3564_RS06785 PF00296 Luciferase-like monooxygenase AP3564_RS06790 PF13460 NAD(P)H-binding AP3564_RS06795 PF07690 Major Facilitator Superfamily AP3564_RS06815 PF07690 Major Facilitator Superfamily AP3564_RS06820 PF00005 ABC transporter AP3564_RS06820 PF08402 TOBE domain AP3564_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS06830 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS06835 PF13416 Bacterial extracellular solute-binding protein AP3564_RS06840 PF03009 Glycerophosphoryl diester phosphodiesterase family AP3564_RS06845 PF00072 Response regulator receiver domain AP3564_RS06845 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS06850 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS06850 PF00672 HAMP domain AP3564_RS06855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP3564_RS06860 PF05504 Spore germination B3/ GerAC like, C-terminal AP3564_RS06870 PF01645 Conserved region in glutamate synthase AP3564_RS06875 PF02915 Rubrerythrin AP3564_RS06880 PF01063 Amino-transferase class IV AP3564_RS06885 PF13419 Haloacid dehalogenase-like hydrolase AP3564_RS06890 PF00085 Thioredoxin AP3564_RS06895 PF07478 D-ala D-ala ligase C-terminus AP3564_RS06895 PF01820 D-ala D-ala ligase N-terminus AP3564_RS06900 PF02875 Mur ligase family, glutamate ligase domain AP3564_RS06900 PF01225 Mur ligase family, catalytic domain AP3564_RS06900 PF08245 Mur ligase middle domain AP3564_RS06905 PF00271 Helicase conserved C-terminal domain AP3564_RS06905 PF00270 DEAD/DEAH box helicase AP3564_RS06910 PF03703 Bacterial PH domain AP3564_RS06915 PF03703 Bacterial PH domain AP3564_RS06920 PF01694 Rhomboid family AP3564_RS06925 PF01648 4'-phosphopantetheinyl transferase superfamily AP3564_RS06935 PF00842 Alanine racemase, C-terminal domain AP3564_RS06935 PF01168 Alanine racemase, N-terminal domain AP3564_RS06940 PF01402 Ribbon-helix-helix protein, copG family AP3564_RS06945 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AP3564_RS06950 PF01609 Transposase DDE domain AP3564_RS06955 PF08678 Rsbr N terminal AP3564_RS06955 PF01740 STAS domain AP3564_RS06960 PF01740 STAS domain AP3564_RS06965 PF13581 Histidine kinase-like ATPase domain AP3564_RS06970 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AP3564_RS06970 PF07228 Stage II sporulation protein E (SpoIIE) AP3564_RS06975 PF01740 STAS domain AP3564_RS06980 PF13581 Histidine kinase-like ATPase domain AP3564_RS06985 PF04542 Sigma-70 region 2 AP3564_RS06985 PF04539 Sigma-70 region 3 AP3564_RS06985 PF04545 Sigma-70, region 4 AP3564_RS06990 PF07228 Stage II sporulation protein E (SpoIIE) AP3564_RS06995 PF09371 Tex-like protein N-terminal domain AP3564_RS06995 PF16921 Tex protein YqgF-like domain AP3564_RS06995 PF17674 HHH domain AP3564_RS06995 PF00575 S1 RNA binding domain AP3564_RS07005 PF10263 SprT-like family AP3564_RS07085 PF00586 AIR synthase related protein, N-terminal domain AP3564_RS07085 PF02769 AIR synthase related protein, C-terminal domain AP3564_RS07090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AP3564_RS07095 PF00814 Glycoprotease family AP3564_RS07100 PF00583 Acetyltransferase (GNAT) family AP3564_RS07105 PF00814 Glycoprotease family AP3564_RS07110 PF12848 ABC transporter AP3564_RS07110 PF16326 ABC transporter C-terminal domain AP3564_RS07110 PF00005 ABC transporter AP3564_RS07115 PF02629 CoA binding domain AP3564_RS07115 PF06971 Putative DNA-binding protein N-terminus AP3564_RS07120 PF02416 mttA/Hcf106 family AP3564_RS07125 PF00902 Sec-independent protein translocase protein (TatC) AP3564_RS07135 PF02517 CPBP intramembrane metalloprotease AP3564_RS07140 PF00166 Chaperonin 10 Kd subunit AP3564_RS07145 PF00118 TCP-1/cpn60 chaperonin family AP3564_RS07150 PF05675 Protein of unknown function (DUF817) AP3564_RS07185 PF01261 Xylose isomerase-like TIM barrel AP3564_RS07200 PF01435 Peptidase family M48 AP3564_RS07225 PF00005 ABC transporter AP3564_RS07250 PF08220 DeoR-like helix-turn-helix domain AP3564_RS07250 PF00455 DeoR C terminal sensor domain AP3564_RS07255 PF00171 Aldehyde dehydrogenase family AP3564_RS07260 PF04962 KduI/IolB family AP3564_RS07265 PF00294 pfkB family carbohydrate kinase AP3564_RS07270 PF00205 Thiamine pyrophosphate enzyme, central domain AP3564_RS07270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP3564_RS07270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP3564_RS07275 PF01261 Xylose isomerase-like TIM barrel AP3564_RS07280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS07280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS07285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS07285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS07290 PF00005 ABC transporter AP3564_RS07295 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS07300 PF13407 Periplasmic binding protein domain AP3564_RS07305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS07305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS07310 PF01116 Fructose-bisphosphate aldolase class-II AP3564_RS07325 PF02754 Cysteine-rich domain AP3564_RS07325 PF13183 4Fe-4S dicluster domain AP3564_RS07330 PF02913 FAD linked oxidases, C-terminal domain AP3564_RS07330 PF01565 FAD binding domain AP3564_RS07335 PF07729 FCD domain AP3564_RS07335 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS07340 PF07690 Major Facilitator Superfamily AP3564_RS07345 PF00171 Aldehyde dehydrogenase family AP3564_RS07350 PF07503 HypF finger AP3564_RS07350 PF00708 Acylphosphatase AP3564_RS07350 PF17788 HypF Kae1-like domain AP3564_RS07350 PF01300 Telomere recombination AP3564_RS07355 PF02146 Sir2 family AP3564_RS07360 PF03881 Fructosamine kinase AP3564_RS07365 PF01609 Transposase DDE domain AP3564_RS07370 PF01566 Natural resistance-associated macrophage protein AP3564_RS07375 PF03746 LamB/YcsF family AP3564_RS07380 PF02626 Carboxyltransferase domain, subdomain A and B AP3564_RS07385 PF02682 Carboxyltransferase domain, subdomain C and D AP3564_RS07390 PF01614 Bacterial transcriptional regulator AP3564_RS07390 PF09339 IclR helix-turn-helix domain AP3564_RS07410 PF07286 Protein of unknown function (DUF1445) AP3564_RS07415 PF01232 Mannitol dehydrogenase Rossmann domain AP3564_RS07415 PF08125 Mannitol dehydrogenase C-terminal domain AP3564_RS07425 PF08125 Mannitol dehydrogenase C-terminal domain AP3564_RS07425 PF01232 Mannitol dehydrogenase Rossmann domain AP3564_RS07430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AP3564_RS07435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AP3564_RS07435 PF00874 PRD domain AP3564_RS07435 PF05043 Mga helix-turn-helix domain AP3564_RS07435 PF08279 HTH domain AP3564_RS07435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AP3564_RS07460 PF00005 ABC transporter AP3564_RS07475 PF00005 ABC transporter AP3564_RS07485 PF00892 EamA-like transporter family AP3564_RS07490 PF00155 Aminotransferase class I and II AP3564_RS07505 PF06463 Molybdenum Cofactor Synthesis C AP3564_RS07505 PF04055 Radical SAM superfamily AP3564_RS07510 PF03454 MoeA C-terminal region (domain IV) AP3564_RS07510 PF00994 Probable molybdopterin binding domain AP3564_RS07510 PF03453 MoeA N-terminal region (domain I and II) AP3564_RS07520 PF01297 Zinc-uptake complex component A periplasmic AP3564_RS07525 PF00005 ABC transporter AP3564_RS07530 PF00950 ABC 3 transport family AP3564_RS07535 PF00950 ABC 3 transport family AP3564_RS07540 PF02742 Iron dependent repressor, metal binding and dimerisation domain AP3564_RS07540 PF01325 Iron dependent repressor, N-terminal DNA binding domain AP3564_RS07550 PF04203 Sortase domain AP3564_RS07555 PF00324 Amino acid permease AP3564_RS07560 PF00912 Transglycosylase AP3564_RS07560 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS07565 PF12389 Camelysin metallo-endopeptidase AP3564_RS07585 PF01381 Helix-turn-helix AP3564_RS07585 PF08671 Anti-repressor SinI AP3564_RS07620 PF03608 PTS system enzyme II sorbitol-specific factor AP3564_RS07625 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AP3564_RS07625 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AP3564_RS07630 PF03829 PTS system glucitol/sorbitol-specific IIA component AP3564_RS07635 PF04198 Putative sugar-binding domain AP3564_RS07640 PF00676 Dehydrogenase E1 component AP3564_RS07645 PF00364 Biotin-requiring enzyme AP3564_RS07645 PF02779 Transketolase, pyrimidine binding domain AP3564_RS07645 PF02780 Transketolase, C-terminal domain AP3564_RS07650 PF00364 Biotin-requiring enzyme AP3564_RS07650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS07650 PF02817 e3 binding domain AP3564_RS07655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP3564_RS07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS07660 PF04198 Putative sugar-binding domain AP3564_RS07665 PF04703 FaeA-like protein AP3564_RS07665 PF00072 Response regulator receiver domain AP3564_RS07670 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AP3564_RS07670 PF17203 Single cache domain 3 AP3564_RS07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS07675 PF03480 Bacterial extracellular solute-binding protein, family 7 AP3564_RS07680 PF00375 Sodium:dicarboxylate symporter family AP3564_RS07685 PF01238 Phosphomannose isomerase type I AP3564_RS07700 PF03816 Cell envelope-related transcriptional attenuator domain AP3564_RS07710 PF02350 UDP-N-acetylglucosamine 2-epimerase AP3564_RS07715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AP3564_RS07715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AP3564_RS07715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AP3564_RS07720 PF03808 Glycosyl transferase WecB/TagA/CpsF family AP3564_RS07730 PF00535 Glycosyl transferase family 2 AP3564_RS07740 PF00892 EamA-like transporter family AP3564_RS07760 PF05036 Sporulation related domain AP3564_RS07760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AP3564_RS07760 PF08239 Bacterial SH3 domain AP3564_RS07765 PF03023 Lipid II flippase MurJ AP3564_RS07770 PF00953 Glycosyl transferase family 4 AP3564_RS07775 PF13439 Glycosyltransferase Family 4 AP3564_RS07775 PF00534 Glycosyl transferases group 1 AP3564_RS07780 PF00483 Nucleotidyl transferase AP3564_RS07785 PF00953 Glycosyl transferase family 4 AP3564_RS07790 PF03816 Cell envelope-related transcriptional attenuator domain AP3564_RS07795 PF01205 Uncharacterized protein family UPF0029 AP3564_RS07795 PF09186 Domain of unknown function (DUF1949) AP3564_RS07800 PF05384 Sensor protein DegS AP3564_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS07800 PF07730 Histidine kinase AP3564_RS07805 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS07805 PF00072 Response regulator receiver domain AP3564_RS07810 PF02645 Uncharacterised protein, DegV family COG1307 AP3564_RS07815 PF00271 Helicase conserved C-terminal domain AP3564_RS07815 PF04851 Type III restriction enzyme, res subunit AP3564_RS07820 PF10719 Late competence development protein ComFB AP3564_RS07845 PF00460 Flagella basal body rod protein AP3564_RS07845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AP3564_RS07850 PF00700 Bacterial flagellin C-terminal helical region AP3564_RS07850 PF00669 Bacterial flagellin N-terminal helical region AP3564_RS07860 PF02623 FliW protein AP3564_RS07865 PF02599 Global regulator protein family AP3564_RS07870 PF00700 Bacterial flagellin C-terminal helical region AP3564_RS07870 PF00669 Bacterial flagellin N-terminal helical region AP3564_RS07875 PF00669 Bacterial flagellin N-terminal helical region AP3564_RS07875 PF00700 Bacterial flagellin C-terminal helical region AP3564_RS07895 PF16363 GDP-mannose 4,6 dehydratase AP3564_RS07900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AP3564_RS07905 PF02350 UDP-N-acetylglucosamine 2-epimerase AP3564_RS07910 PF03102 NeuB family AP3564_RS07910 PF08666 SAF domain AP3564_RS07920 PF00483 Nucleotidyl transferase AP3564_RS07925 PF02348 Cytidylyltransferase AP3564_RS07925 PF13472 GDSL-like Lipase/Acylhydrolase family AP3564_RS07930 PF01609 Transposase DDE domain AP3564_RS07940 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AP3564_RS07960 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS07960 PF00107 Zinc-binding dehydrogenase AP3564_RS07965 PF08361 MAATS-type transcriptional repressor, C-terminal region AP3564_RS07965 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS07975 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS07980 PF06725 3D domain AP3564_RS07980 PF01476 LysM domain AP3564_RS07990 PF01027 Inhibitor of apoptosis-promoting Bax1 AP3564_RS07995 PF00158 Sigma-54 interaction domain AP3564_RS07995 PF02954 Bacterial regulatory protein, Fis family AP3564_RS07995 PF00989 PAS fold AP3564_RS08000 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS08010 PF00171 Aldehyde dehydrogenase family AP3564_RS08015 PF07690 Major Facilitator Superfamily AP3564_RS08020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS08020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS08025 PF03123 CAT RNA binding domain AP3564_RS08025 PF00874 PRD domain AP3564_RS08030 PF00232 Glycosyl hydrolase family 1 AP3564_RS08035 PF00232 Glycosyl hydrolase family 1 AP3564_RS08040 PF00367 phosphotransferase system, EIIB AP3564_RS08040 PF02378 Phosphotransferase system, EIIC AP3564_RS08040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AP3564_RS08050 PF09084 NMT1/THI5 like AP3564_RS08055 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS08060 PF00005 ABC transporter AP3564_RS08065 PF05227 CHASE3 domain AP3564_RS08065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS08065 PF00672 HAMP domain AP3564_RS08075 PF09347 Domain of unknown function (DUF1989) AP3564_RS08080 PF00289 Biotin carboxylase, N-terminal domain AP3564_RS08080 PF02785 Biotin carboxylase C-terminal domain AP3564_RS08080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS08085 PF01425 Amidase AP3564_RS08090 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS08095 PF13407 Periplasmic binding protein domain AP3564_RS08100 PF01791 DeoC/LacD family aldolase AP3564_RS08110 PF01791 DeoC/LacD family aldolase AP3564_RS08120 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS08125 PF00202 Aminotransferase class-III AP3564_RS08135 PF17853 GGDEF-like domain AP3564_RS08135 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS08140 PF07687 Peptidase dimerisation domain AP3564_RS08140 PF01546 Peptidase family M20/M25/M40 AP3564_RS08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS08145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AP3564_RS08150 PF01180 Dihydroorotate dehydrogenase AP3564_RS08155 PF01979 Amidohydrolase family AP3564_RS08160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AP3564_RS08175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS08180 PF00232 Glycosyl hydrolase family 1 AP3564_RS08185 PF00082 Subtilase family AP3564_RS08210 PF13732 Domain of unknown function (DUF4162) AP3564_RS08210 PF00005 ABC transporter AP3564_RS08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS08220 PF00672 HAMP domain AP3564_RS08220 PF02743 Cache domain AP3564_RS08225 PF00596 Class II Aldolase and Adducin N-terminal domain AP3564_RS08230 PF08220 DeoR-like helix-turn-helix domain AP3564_RS08230 PF00455 DeoR C terminal sensor domain AP3564_RS08235 PF05025 RbsD / FucU transport protein family AP3564_RS08240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS08240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS08245 PF00923 Transaldolase/Fructose-6-phosphate aldolase AP3564_RS08250 PF00005 ABC transporter AP3564_RS08265 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS08275 PF00596 Class II Aldolase and Adducin N-terminal domain AP3564_RS08280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS08280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS08285 PF07882 L-fucose isomerase, second N-terminal domain AP3564_RS08285 PF07881 L-fucose isomerase, first N-terminal domain AP3564_RS08285 PF02952 L-fucose isomerase, C-terminal domain AP3564_RS08290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS08290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS08295 PF00108 Thiolase, N-terminal domain AP3564_RS08295 PF02803 Thiolase, C-terminal domain AP3564_RS08300 PF01144 Coenzyme A transferase AP3564_RS08305 PF01144 Coenzyme A transferase AP3564_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS08310 PF03466 LysR substrate binding domain AP3564_RS08315 PF05378 Hydantoinase/oxoprolinase N-terminal region AP3564_RS08315 PF01968 Hydantoinase/oxoprolinase AP3564_RS08320 PF02538 Hydantoinase B/oxoprolinase AP3564_RS08325 PF08882 Acetone carboxylase gamma subunit AP3564_RS08330 PF13426 PAS domain AP3564_RS08330 PF02954 Bacterial regulatory protein, Fis family AP3564_RS08330 PF00158 Sigma-54 interaction domain AP3564_RS08340 PF07730 Histidine kinase AP3564_RS08345 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS08345 PF00072 Response regulator receiver domain AP3564_RS08350 PF00005 ABC transporter AP3564_RS08365 PF00664 ABC transporter transmembrane region AP3564_RS08365 PF00005 ABC transporter AP3564_RS08375 PF03737 Aldolase/RraA AP3564_RS08380 PF08241 Methyltransferase domain AP3564_RS08390 PF01476 LysM domain AP3564_RS08390 PF03734 L,D-transpeptidase catalytic domain AP3564_RS08395 PF01661 Macro domain AP3564_RS08400 PF00005 ABC transporter AP3564_RS08405 PF04073 Aminoacyl-tRNA editing domain AP3564_RS08415 PF03109 ABC1 family AP3564_RS08420 PF08437 Glycosyl transferase family 8 C-terminal AP3564_RS08420 PF01501 Glycosyl transferase family 8 AP3564_RS08435 PF07905 Purine catabolism regulatory protein-like family AP3564_RS08435 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS08435 PF17853 GGDEF-like domain AP3564_RS08440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AP3564_RS08440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AP3564_RS08445 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS08450 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS08450 PF00501 AMP-binding enzyme AP3564_RS08460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS08460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS08460 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS08470 PF01494 FAD binding domain AP3564_RS08480 PF14535 AMP-binding enzyme C-terminal domain AP3564_RS08480 PF00501 AMP-binding enzyme AP3564_RS08485 PF01614 Bacterial transcriptional regulator AP3564_RS08485 PF09339 IclR helix-turn-helix domain AP3564_RS08495 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS08505 PF07883 Cupin domain AP3564_RS08515 PF03646 FlaG protein AP3564_RS08520 PF02465 Flagellar hook-associated protein 2 N-terminus AP3564_RS08520 PF07195 Flagellar hook-associated protein 2 C-terminus AP3564_RS08520 PF07196 Flagellin hook IN motif AP3564_RS08525 PF02561 Flagellar protein FliS AP3564_RS08535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AP3564_RS08535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AP3564_RS08540 PF07516 SecA Wing and Scaffold domain AP3564_RS08540 PF07517 SecA DEAD-like domain AP3564_RS08540 PF01043 SecA preprotein cross-linking domain AP3564_RS08540 PF02810 SEC-C motif AP3564_RS08550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP3564_RS08555 PF00005 ABC transporter AP3564_RS08560 PF02687 FtsX-like permease family AP3564_RS08560 PF18075 FtsX extracellular domain AP3564_RS08565 PF08525 Opacity-associated protein A N-terminal motif AP3564_RS08565 PF01476 LysM domain AP3564_RS08565 PF01551 Peptidase family M23 AP3564_RS08570 PF01471 Putative peptidoglycan binding domain AP3564_RS08570 PF17820 PDZ domain AP3564_RS08570 PF03572 Peptidase family S41 AP3564_RS08580 PF17820 PDZ domain AP3564_RS08590 PF01545 Cation efflux family AP3564_RS08590 PF16916 Dimerisation domain of Zinc Transporter AP3564_RS08595 PF01022 Bacterial regulatory protein, arsR family AP3564_RS08610 PF00403 Heavy-metal-associated domain AP3564_RS08620 PF01385 Probable transposase AP3564_RS08620 PF12323 Helix-turn-helix domain AP3564_RS08620 PF07282 Putative transposase DNA-binding domain AP3564_RS08625 PF00480 ROK family AP3564_RS08635 PF04851 Type III restriction enzyme, res subunit AP3564_RS08635 PF12344 Ultra-violet resistance protein B AP3564_RS08635 PF02151 UvrB/uvrC motif AP3564_RS08635 PF00271 Helicase conserved C-terminal domain AP3564_RS08635 PF17757 UvrB interaction domain AP3564_RS08640 PF17760 UvrA interaction domain AP3564_RS08640 PF17755 UvrA DNA-binding domain AP3564_RS08640 PF00005 ABC transporter AP3564_RS08650 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS08650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS08650 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS08660 PF01464 Transglycosylase SLT domain AP3564_RS08660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP3564_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS08670 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS08685 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AP3564_RS08690 PF00149 Calcineurin-like phosphoesterase AP3564_RS08695 PF07475 HPr Serine kinase C-terminal domain AP3564_RS08695 PF02603 HPr Serine kinase N terminus AP3564_RS08700 PF01790 Prolipoprotein diacylglyceryl transferase AP3564_RS08705 PF07670 Nucleoside recognition AP3564_RS08710 PF13419 Haloacid dehalogenase-like hydrolase AP3564_RS08715 PF14602 Hexapeptide repeat of succinyl-transferase AP3564_RS08720 PF13393 Histidyl-tRNA synthetase AP3564_RS08725 PF01634 ATP phosphoribosyltransferase AP3564_RS08730 PF00815 Histidinol dehydrogenase AP3564_RS08735 PF00475 Imidazoleglycerol-phosphate dehydratase AP3564_RS08740 PF00117 Glutamine amidotransferase class-I AP3564_RS08745 PF00977 Histidine biosynthesis protein AP3564_RS08750 PF00977 Histidine biosynthesis protein AP3564_RS08755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AP3564_RS08755 PF01502 Phosphoribosyl-AMP cyclohydrolase AP3564_RS08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS08770 PF00293 NUDIX domain AP3564_RS08775 PF03668 P-loop ATPase protein family AP3564_RS08780 PF01933 Uncharacterised protein family UPF0052 AP3564_RS08785 PF14527 WhiA LAGLIDADG-like domain AP3564_RS08785 PF10298 WhiA N-terminal LAGLIDADG-like domain AP3564_RS08785 PF02650 WhiA C-terminal HTH domain AP3564_RS08790 PF00381 PTS HPr component phosphorylation site AP3564_RS08795 PF00574 Clp protease AP3564_RS08810 PF04397 LytTr DNA-binding domain AP3564_RS08810 PF00072 Response regulator receiver domain AP3564_RS08815 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AP3564_RS08815 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AP3564_RS08820 PF02595 Glycerate kinase family AP3564_RS08830 PF02056 Family 4 glycosyl hydrolase AP3564_RS08830 PF11975 Family 4 glycosyl hydrolase C-terminal domain AP3564_RS08860 PF00589 Phage integrase family AP3564_RS08860 PF02899 Phage integrase, N-terminal SAM-like domain AP3564_RS08885 PF00701 Dihydrodipicolinate synthetase family AP3564_RS08890 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS08895 PF07690 Major Facilitator Superfamily AP3564_RS08905 PF01979 Amidohydrolase family AP3564_RS08910 PF00005 ABC transporter AP3564_RS08915 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS08925 PF09628 YvfG protein AP3564_RS08930 PF04552 Sigma-54, DNA binding domain AP3564_RS08930 PF00309 Sigma-54 factor, Activator interacting domain (AID) AP3564_RS08930 PF04963 Sigma-54 factor, core binding domain AP3564_RS08940 PF04198 Putative sugar-binding domain AP3564_RS08945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP3564_RS08945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AP3564_RS08950 PF00162 Phosphoglycerate kinase AP3564_RS08955 PF00121 Triosephosphate isomerase AP3564_RS08960 PF01676 Metalloenzyme superfamily AP3564_RS08960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AP3564_RS08965 PF00113 Enolase, C-terminal TIM barrel domain AP3564_RS08965 PF03952 Enolase, N-terminal domain AP3564_RS08970 PF11208 Protein of unknown function (DUF2992) AP3564_RS08975 PF03840 Preprotein translocase SecG subunit AP3564_RS08980 PF12146 Serine aminopeptidase, S33 AP3564_RS08985 PF17876 Cold shock domain AP3564_RS08985 PF00575 S1 RNA binding domain AP3564_RS08985 PF00773 RNB domain AP3564_RS08985 PF08206 Ribonuclease B OB domain AP3564_RS08990 PF01668 SmpB protein AP3564_RS09005 PF00551 Formyl transferase AP3564_RS09005 PF01842 ACT domain AP3564_RS09010 PF13411 MerR HTH family regulatory protein AP3564_RS09015 PF00206 Lyase AP3564_RS09015 PF10415 Fumarase C C-terminus AP3564_RS09020 PF13115 YtkA-like AP3564_RS09025 PF02386 Cation transport protein AP3564_RS09030 PF01497 Periplasmic binding protein AP3564_RS09035 PF01032 FecCD transport family AP3564_RS09040 PF01032 FecCD transport family AP3564_RS09045 PF00005 ABC transporter AP3564_RS09055 PF10835 Protein of unknown function (DUF2573) AP3564_RS09060 PF07875 Coat F domain AP3564_RS09070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AP3564_RS09070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AP3564_RS09070 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS09075 PF00108 Thiolase, N-terminal domain AP3564_RS09075 PF02803 Thiolase, C-terminal domain AP3564_RS09080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS09080 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS09080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS09085 PF03960 ArsC family AP3564_RS09090 PF01597 Glycine cleavage H-protein AP3564_RS09095 PF01751 Toprim domain AP3564_RS09100 PF00085 Thioredoxin AP3564_RS09110 PF09383 NIL domain AP3564_RS09110 PF00005 ABC transporter AP3564_RS09115 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS09120 PF03180 NLPA lipoprotein AP3564_RS09130 PF00005 ABC transporter AP3564_RS09135 PF01458 Uncharacterized protein family (UPF0051) AP3564_RS09140 PF00266 Aminotransferase class-V AP3564_RS09145 PF01592 NifU-like N terminal domain AP3564_RS09150 PF01458 Uncharacterized protein family (UPF0051) AP3564_RS09165 PF01904 Protein of unknown function DUF72 AP3564_RS09170 PF02872 5'-nucleotidase, C-terminal domain AP3564_RS09175 PF08827 Domain of unknown function (DUF1805) AP3564_RS09180 PF01551 Peptidase family M23 AP3564_RS09185 PF04055 Radical SAM superfamily AP3564_RS09185 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AP3564_RS09190 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AP3564_RS09195 PF06265 Protein of unknown function (DUF1027) AP3564_RS09210 PF01934 Protein of unknown function DUF86 AP3564_RS09215 PF13344 Haloacid dehalogenase-like hydrolase AP3564_RS09220 PF04608 Phosphatidylglycerophosphatase A AP3564_RS09230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS09230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS09235 PF03447 Homoserine dehydrogenase, NAD binding domain AP3564_RS09235 PF00742 Homoserine dehydrogenase AP3564_RS09235 PF01842 ACT domain AP3564_RS09240 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS09245 PF00288 GHMP kinases N terminal domain AP3564_RS09245 PF08544 GHMP kinases C terminal AP3564_RS09250 PF01106 NifU-like domain AP3564_RS09255 PF07315 Protein of unknown function (DUF1462) AP3564_RS09260 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS09265 PF07293 Protein of unknown function (DUF1450) AP3564_RS09270 PF01678 Diaminopimelate epimerase AP3564_RS09275 PF01521 Iron-sulphur cluster biosynthesis AP3564_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS09290 PF14068 Putative membrane protein AP3564_RS09295 PF06725 3D domain AP3564_RS09300 PF00883 Cytosol aminopeptidase family, catalytic domain AP3564_RS09300 PF02789 Cytosol aminopeptidase family, N-terminal domain AP3564_RS09310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AP3564_RS09310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AP3564_RS09315 PF01966 HD domain AP3564_RS09325 PF14166 YueH-like protein AP3564_RS09340 PF00171 Aldehyde dehydrogenase family AP3564_RS09350 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS09355 PF13426 PAS domain AP3564_RS09355 PF02954 Bacterial regulatory protein, Fis family AP3564_RS09355 PF00158 Sigma-54 interaction domain AP3564_RS09375 PF00348 Polyprenyl synthetase AP3564_RS09380 PF05952 Bacillus competence pheromone ComX AP3564_RS09385 PF07730 Histidine kinase AP3564_RS09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS09390 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS09390 PF00072 Response regulator receiver domain AP3564_RS09395 PF03334 Na+/H+ antiporter subunit AP3564_RS09400 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AP3564_RS09405 PF01899 Na+/H+ ion antiporter subunit AP3564_RS09410 PF00361 Proton-conducting membrane transporter AP3564_RS09415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AP3564_RS09420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AP3564_RS09425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP3564_RS09425 PF00361 Proton-conducting membrane transporter AP3564_RS09425 PF13244 Domain of unknown function (DUF4040) AP3564_RS09435 PF04134 Protein of unknown function, DUF393 AP3564_RS09440 PF00929 Exonuclease AP3564_RS09445 PF08810 Kinase associated protein B AP3564_RS09455 PF00155 Aminotransferase class I and II AP3564_RS09460 PF08958 Domain of unknown function (DUF1871) AP3564_RS09465 PF00561 alpha/beta hydrolase fold AP3564_RS09465 PF08386 TAP-like protein AP3564_RS09470 PF01037 Lrp/AsnC ligand binding domain AP3564_RS09475 PF00155 Aminotransferase class I and II AP3564_RS09480 PF00575 S1 RNA binding domain AP3564_RS09485 PF04070 Domain of unknown function (DUF378) AP3564_RS09490 PF00342 Phosphoglucose isomerase AP3564_RS09495 PF08868 YugN-like family AP3564_RS09500 PF02254 TrkA-N domain AP3564_RS09500 PF07885 Ion channel AP3564_RS09505 PF11458 Membrane-integrating protein Mistic AP3564_RS09510 PF04298 Putative neutral zinc metallopeptidase AP3564_RS09515 PF01894 Uncharacterised protein family UPF0047 AP3564_RS09640 PF01258 Prokaryotic dksA/traR C4-type zinc finger AP3564_RS09645 PF01040 UbiA prenyltransferase family AP3564_RS09650 PF00425 chorismate binding enzyme AP3564_RS09655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP3564_RS09655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP3564_RS09655 PF16582 Middle domain of thiamine pyrophosphate AP3564_RS09660 PF00561 alpha/beta hydrolase fold AP3564_RS09665 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS09670 PF00501 AMP-binding enzyme AP3564_RS09670 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS09680 PF01809 Putative membrane protein insertion efficiency factor AP3564_RS09685 PF02664 S-Ribosylhomocysteinase (LuxS) AP3564_RS09690 PF00210 Ferritin-like domain AP3564_RS09700 PF00293 NUDIX domain AP3564_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS09710 PF00005 ABC transporter AP3564_RS09720 PF00326 Prolyl oligopeptidase family AP3564_RS09725 PF10763 Protein of unknown function (DUF2584) AP3564_RS09735 PF00665 Integrase core domain AP3564_RS09735 PF13276 HTH-like domain AP3564_RS09735 PF13333 Integrase core domain AP3564_RS09745 PF01293 Phosphoenolpyruvate carboxykinase AP3564_RS09750 PF02772 S-adenosylmethionine synthetase, central domain AP3564_RS09750 PF02773 S-adenosylmethionine synthetase, C-terminal domain AP3564_RS09750 PF00438 S-adenosylmethionine synthetase, N-terminal domain AP3564_RS09755 PF01569 PAP2 superfamily AP3564_RS09760 PF00132 Bacterial transferase hexapeptide (six repeats) AP3564_RS09775 PF12146 Serine aminopeptidase, S33 AP3564_RS09780 PF10776 Protein of unknown function (DUF2600) AP3564_RS09785 PF06962 Putative rRNA methylase AP3564_RS09790 PF04055 Radical SAM superfamily AP3564_RS09790 PF16199 Radical_SAM C-terminal domain AP3564_RS09795 PF10732 Protein of unknown function (DUF2524) AP3564_RS09800 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS09805 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AP3564_RS09805 PF00534 Glycosyl transferases group 1 AP3564_RS09810 PF00133 tRNA synthetases class I (I, L, M and V) AP3564_RS09810 PF08264 Anticodon-binding domain of tRNA AP3564_RS09810 PF13603 Leucyl-tRNA synthetase, Domain 2 AP3564_RS09810 PF09334 tRNA synthetases class I (M) AP3564_RS09815 PF00581 Rhodanese-like domain AP3564_RS09820 PF10957 Sporulation protein Cse60 AP3564_RS09825 PF14824 Sirohaem biosynthesis protein central AP3564_RS09825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP3564_RS09825 PF10414 Sirohaem synthase dimerisation region AP3564_RS09840 PF13333 Integrase core domain AP3564_RS09840 PF13276 HTH-like domain AP3564_RS09840 PF00665 Integrase core domain AP3564_RS09850 PF14667 Polysaccharide biosynthesis C-terminal domain AP3564_RS09850 PF01943 Polysaccharide biosynthesis protein AP3564_RS09855 PF01479 S4 domain AP3564_RS09855 PF00849 RNA pseudouridylate synthase AP3564_RS09860 PF08220 DeoR-like helix-turn-helix domain AP3564_RS09870 PF00860 Permease family AP3564_RS09875 PF01546 Peptidase family M20/M25/M40 AP3564_RS09880 PF00893 Small Multidrug Resistance protein AP3564_RS09885 PF00893 Small Multidrug Resistance protein AP3564_RS09890 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS09895 PF02834 LigT like Phosphoesterase AP3564_RS09900 PF03788 LrgA family AP3564_RS09905 PF04172 LrgB-like family AP3564_RS09915 PF01636 Phosphotransferase enzyme family AP3564_RS09920 PF14165 YtzH-like protein AP3564_RS09925 PF02390 Putative methyltransferase AP3564_RS09935 PF03413 Peptidase propeptide and YPEB domain AP3564_RS09940 PF05343 M42 glutamyl aminopeptidase AP3564_RS09945 PF01931 Protein of unknown function DUF84 AP3564_RS09950 PF00085 Thioredoxin AP3564_RS09955 PF07285 Protein of unknown function (DUF1444) AP3564_RS09960 PF14794 Domain of unknown function (DUF4479) AP3564_RS09960 PF01588 Putative tRNA binding domain AP3564_RS09965 PF03606 C4-dicarboxylate anaerobic carrier AP3564_RS09970 PF01274 Malate synthase AP3564_RS09975 PF00463 Isocitrate lyase family AP3564_RS09980 PF08858 IDEAL domain AP3564_RS09985 PF06338 ComK protein AP3564_RS09995 PF09335 SNARE associated Golgi protein AP3564_RS10000 PF10502 Signal peptidase, peptidase S26 AP3564_RS10005 PF12705 PD-(D/E)XK nuclease superfamily AP3564_RS10010 PF13361 UvrD-like helicase C-terminal domain AP3564_RS10010 PF12705 PD-(D/E)XK nuclease superfamily AP3564_RS10010 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS10015 PF13361 UvrD-like helicase C-terminal domain AP3564_RS10015 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS10015 PF12705 PD-(D/E)XK nuclease superfamily AP3564_RS10020 PF12320 Type 5 capsule protein repressor C-terminal domain AP3564_RS10020 PF00149 Calcineurin-like phosphoesterase AP3564_RS10025 PF13476 AAA domain AP3564_RS10030 PF10676 Spore germination protein gerPA/gerPF AP3564_RS10045 PF10737 Spore germination protein GerPC AP3564_RS10050 PF10803 Spore germination GerPB AP3564_RS10055 PF10676 Spore germination protein gerPA/gerPF AP3564_RS10060 PF02082 Transcriptional regulator AP3564_RS10065 PF10055 Uncharacterized small protein (DUF2292) AP3564_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS10085 PF17850 CysA C-terminal regulatory domain AP3564_RS10085 PF00005 ABC transporter AP3564_RS10085 PF12857 TOBE-like domain AP3564_RS10090 PF09084 NMT1/THI5 like AP3564_RS10105 PF01026 TatD related DNase AP3564_RS10110 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS10115 PF07457 Protein of unknown function (DUF1516) AP3564_RS10125 PF00733 Asparagine synthase AP3564_RS10125 PF13537 Glutamine amidotransferase domain AP3564_RS10135 PF16657 Maltogenic Amylase, C-terminal domain AP3564_RS10135 PF00128 Alpha amylase, catalytic domain AP3564_RS10135 PF02903 Alpha amylase, N-terminal ig-like domain AP3564_RS10145 PF10282 Lactonase, 7-bladed beta-propeller AP3564_RS10150 PF00149 Calcineurin-like phosphoesterase AP3564_RS10165 PF02574 Homocysteine S-methyltransferase AP3564_RS10165 PF00809 Pterin binding enzyme AP3564_RS10165 PF02310 B12 binding domain AP3564_RS10165 PF02607 B12 binding domain AP3564_RS10165 PF02965 Vitamin B12 dependent methionine synthase, activation domain AP3564_RS10170 PF02219 Methylenetetrahydrofolate reductase AP3564_RS10170 PF02574 Homocysteine S-methyltransferase AP3564_RS10175 PF04461 Protein of unknown function (DUF520) AP3564_RS10180 PF12323 Helix-turn-helix domain AP3564_RS10180 PF07282 Putative transposase DNA-binding domain AP3564_RS10180 PF01385 Probable transposase AP3564_RS10200 PF02645 Uncharacterised protein, DegV family COG1307 AP3564_RS10215 PF00326 Prolyl oligopeptidase family AP3564_RS10220 PF01883 Iron-sulfur cluster assembly protein AP3564_RS10225 PF02774 Semialdehyde dehydrogenase, dimerisation domain AP3564_RS10225 PF01118 Semialdehyde dehydrogenase, NAD binding domain AP3564_RS10230 PF01960 ArgJ family AP3564_RS10235 PF00696 Amino acid kinase family AP3564_RS10240 PF00202 Aminotransferase class-III AP3564_RS10245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AP3564_RS10245 PF00117 Glutamine amidotransferase class-I AP3564_RS10250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS10250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AP3564_RS10255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AP3564_RS10255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AP3564_RS10260 PF14168 YjzC-like protein AP3564_RS10265 PF10431 C-terminal, D2-small domain, of ClpB protein AP3564_RS10265 PF17871 AAA lid domain AP3564_RS10265 PF07724 AAA domain (Cdc48 subfamily) AP3564_RS10265 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS10265 PF02861 Clp amino terminal domain, pathogenicity island component AP3564_RS10285 PF02608 ABC transporter substrate-binding protein PnrA-like AP3564_RS10295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AP3564_RS10295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AP3564_RS10300 PF02801 Beta-ketoacyl synthase, C-terminal domain AP3564_RS10300 PF00109 Beta-ketoacyl synthase, N-terminal domain AP3564_RS10310 PF10026 Predicted Zn-dependent protease (DUF2268) AP3564_RS10315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AP3564_RS10320 PF12227 Protein of unknown function (DUF3603) AP3564_RS10325 PF00579 tRNA synthetases class I (W and Y) AP3564_RS10330 PF03960 ArsC family AP3564_RS10335 PF03741 Integral membrane protein TerC family AP3564_RS10340 PF05389 Negative regulator of genetic competence (MecA) AP3564_RS10345 PF13396 Phospholipase_D-nuclease N-terminal AP3564_RS10345 PF13091 PLD-like domain AP3564_RS10350 PF06054 Competence protein CoiA-like family AP3564_RS10355 PF08439 Oligopeptidase F AP3564_RS10355 PF01432 Peptidase family M3 AP3564_RS10375 PF01152 Bacterial-like globin AP3564_RS10380 PF01464 Transglycosylase SLT domain AP3564_RS10385 PF01928 CYTH domain AP3564_RS10395 PF04607 Region found in RelA / SpoT proteins AP3564_RS10400 PF01513 ATP-NAD kinase AP3564_RS10405 PF00849 RNA pseudouridylate synthase AP3564_RS10410 PF00571 CBS domain AP3564_RS10410 PF01769 Divalent cation transporter AP3564_RS10410 PF03448 MgtE intracellular N domain AP3564_RS10415 PF02080 TrkA-C domain AP3564_RS10415 PF00999 Sodium/hydrogen exchanger family AP3564_RS10415 PF02254 TrkA-N domain AP3564_RS10420 PF02581 Thiamine monophosphate synthase AP3564_RS10425 PF01266 FAD dependent oxidoreductase AP3564_RS10430 PF02597 ThiS family AP3564_RS10435 PF05690 Thiazole biosynthesis protein ThiG AP3564_RS10440 PF00899 ThiF family AP3564_RS10445 PF08543 Phosphomethylpyrimidine kinase AP3564_RS10460 PF07098 Protein of unknown function (DUF1360) AP3564_RS10500 PF14069 Stage VI sporulation protein F AP3564_RS10510 PF04239 Protein of unknown function (DUF421) AP3564_RS10515 PF13673 Acetyltransferase (GNAT) domain AP3564_RS10525 PF00756 Putative esterase AP3564_RS10530 PF00005 ABC transporter AP3564_RS10540 PF09084 NMT1/THI5 like AP3564_RS10550 PF01053 Cys/Met metabolism PLP-dependent enzyme AP3564_RS10555 PF01053 Cys/Met metabolism PLP-dependent enzyme AP3564_RS10560 PF16868 NMT1-like family AP3564_RS10580 PF00753 Metallo-beta-lactamase superfamily AP3564_RS10580 PF13567 Domain of unknown function (DUF4131) AP3564_RS10580 PF03772 Competence protein AP3564_RS10590 PF06463 Molybdenum Cofactor Synthesis C AP3564_RS10590 PF04055 Radical SAM superfamily AP3564_RS10595 PF12833 Helix-turn-helix domain AP3564_RS10595 PF10114 Sensory domain found in PocR AP3564_RS10600 PF13478 XdhC Rossmann domain AP3564_RS10600 PF02625 XdhC and CoxI family AP3564_RS10605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AP3564_RS10605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AP3564_RS10615 PF00941 FAD binding domain in molybdopterin dehydrogenase AP3564_RS10615 PF03450 CO dehydrogenase flavoprotein C-terminal domain AP3564_RS10620 PF01799 [2Fe-2S] binding domain AP3564_RS10620 PF00111 2Fe-2S iron-sulfur cluster binding domain AP3564_RS10625 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS10625 PF00501 AMP-binding enzyme AP3564_RS10630 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS10635 PF00083 Sugar (and other) transporter AP3564_RS10635 PF07690 Major Facilitator Superfamily AP3564_RS10675 PF13529 Peptidase_C39 like family AP3564_RS10680 PF00733 Asparagine synthase AP3564_RS10680 PF13537 Glutamine amidotransferase domain AP3564_RS10710 PF00665 Integrase core domain AP3564_RS10710 PF13333 Integrase core domain AP3564_RS10710 PF13276 HTH-like domain AP3564_RS10745 PF18593 CdiI immunity protein AP3564_RS10800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AP3564_RS10805 PF02378 Phosphotransferase system, EIIC AP3564_RS10805 PF00367 phosphotransferase system, EIIB AP3564_RS10810 PF16657 Maltogenic Amylase, C-terminal domain AP3564_RS10810 PF00128 Alpha amylase, catalytic domain AP3564_RS10815 PF07702 UTRA domain AP3564_RS10815 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS10830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS10835 PF01022 Bacterial regulatory protein, arsR family AP3564_RS10840 PF00403 Heavy-metal-associated domain AP3564_RS10855 PF07732 Multicopper oxidase AP3564_RS10855 PF07732 Multicopper oxidase AP3564_RS10855 PF00394 Multicopper oxidase AP3564_RS10855 PF07731 Multicopper oxidase AP3564_RS10855 PF00394 Multicopper oxidase AP3564_RS10855 PF07731 Multicopper oxidase AP3564_RS10885 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS10885 PF00672 HAMP domain AP3564_RS10890 PF00072 Response regulator receiver domain AP3564_RS10890 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS10900 PF01609 Transposase DDE domain AP3564_RS10920 PF00578 AhpC/TSA family AP3564_RS10925 PF02683 Cytochrome C biogenesis protein transmembrane region AP3564_RS10930 PF02583 Metal-sensitive transcriptional repressor AP3564_RS10935 PF00403 Heavy-metal-associated domain AP3564_RS10940 PF00403 Heavy-metal-associated domain AP3564_RS10950 PF07731 Multicopper oxidase AP3564_RS10950 PF00394 Multicopper oxidase AP3564_RS10950 PF07732 Multicopper oxidase AP3564_RS10965 PF13007 Transposase C of IS166 homeodomain AP3564_RS10965 PF03050 Transposase IS66 family AP3564_RS10965 PF13817 IS66 C-terminal element AP3564_RS10965 PF13005 zinc-finger binding domain of transposase IS66 AP3564_RS10970 PF13407 Periplasmic binding protein domain AP3564_RS10970 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS10975 PF00367 phosphotransferase system, EIIB AP3564_RS10975 PF02378 Phosphotransferase system, EIIC AP3564_RS10980 PF08244 Glycosyl hydrolases family 32 C terminal AP3564_RS10980 PF00251 Glycosyl hydrolases family 32 N-terminal domain AP3564_RS10985 PF00294 pfkB family carbohydrate kinase AP3564_RS10990 PF00202 Aminotransferase class-III AP3564_RS11000 PF02632 BioY family AP3564_RS11010 PF00692 dUTPase AP3564_RS11015 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP3564_RS11015 PF07683 Cobalamin synthesis protein cobW C-terminal domain AP3564_RS11035 PF01965 DJ-1/PfpI family AP3564_RS11040 PF17853 GGDEF-like domain AP3564_RS11040 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS11040 PF05651 Putative sugar diacid recognition AP3564_RS11045 PF01565 FAD binding domain AP3564_RS11045 PF02913 FAD linked oxidases, C-terminal domain AP3564_RS11050 PF02754 Cysteine-rich domain AP3564_RS11050 PF13183 4Fe-4S dicluster domain AP3564_RS11055 PF00085 Thioredoxin AP3564_RS11100 PF00271 Helicase conserved C-terminal domain AP3564_RS11100 PF08463 EcoEI R protein C-terminal AP3564_RS11100 PF04851 Type III restriction enzyme, res subunit AP3564_RS11100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP3564_RS11105 PF02384 N-6 DNA Methylase AP3564_RS11110 PF01420 Type I restriction modification DNA specificity domain AP3564_RS11125 PF03050 Transposase IS66 family AP3564_RS11125 PF13817 IS66 C-terminal element AP3564_RS11125 PF13005 zinc-finger binding domain of transposase IS66 AP3564_RS11125 PF13007 Transposase C of IS166 homeodomain AP3564_RS11160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS11180 PF16868 NMT1-like family AP3564_RS11195 PF02913 FAD linked oxidases, C-terminal domain AP3564_RS11195 PF01565 FAD binding domain AP3564_RS11200 PF13183 4Fe-4S dicluster domain AP3564_RS11200 PF02754 Cysteine-rich domain AP3564_RS11205 PF01266 FAD dependent oxidoreductase AP3564_RS11245 PF02384 N-6 DNA Methylase AP3564_RS11265 PF00664 ABC transporter transmembrane region AP3564_RS11265 PF00005 ABC transporter AP3564_RS11270 PF00005 ABC transporter AP3564_RS11270 PF00664 ABC transporter transmembrane region AP3564_RS11275 PF02322 Cytochrome bd terminal oxidase subunit II AP3564_RS11280 PF01654 Cytochrome bd terminal oxidase subunit I AP3564_RS11285 PF11514 Protein of unknown function (DUF3219) AP3564_RS11290 PF00005 ABC transporter AP3564_RS11305 PF02634 FdhD/NarQ family AP3564_RS11310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AP3564_RS11310 PF01568 Molydopterin dinucleotide binding domain AP3564_RS11310 PF12838 4Fe-4S dicluster domain AP3564_RS11310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AP3564_RS11310 PF00384 Molybdopterin oxidoreductase AP3564_RS11315 PF07849 Protein of unknown function (DUF1641) AP3564_RS11320 PF00183 Hsp90 protein AP3564_RS11330 PF00149 Calcineurin-like phosphoesterase AP3564_RS11340 PF07690 Major Facilitator Superfamily AP3564_RS11345 PF07883 Cupin domain AP3564_RS11355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP3564_RS11365 PF03061 Thioesterase superfamily AP3564_RS11370 PF00501 AMP-binding enzyme AP3564_RS11370 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS11380 PF00005 ABC transporter AP3564_RS11395 PF00872 Transposase, Mutator family AP3564_RS11400 PF00005 ABC transporter AP3564_RS11400 PF02687 FtsX-like permease family AP3564_RS11400 PF12704 MacB-like periplasmic core domain AP3564_RS11410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS11435 PF01381 Helix-turn-helix AP3564_RS11440 PF01614 Bacterial transcriptional regulator AP3564_RS11440 PF09339 IclR helix-turn-helix domain AP3564_RS11445 PF01380 SIS domain AP3564_RS11475 PF01053 Cys/Met metabolism PLP-dependent enzyme AP3564_RS11485 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AP3564_RS11485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AP3564_RS11485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AP3564_RS11490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AP3564_RS11490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AP3564_RS11495 PF02803 Thiolase, C-terminal domain AP3564_RS11495 PF00108 Thiolase, N-terminal domain AP3564_RS11500 PF00171 Aldehyde dehydrogenase family AP3564_RS11505 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS11520 PF16123 Hydroxyacylglutathione hydrolase C-terminus AP3564_RS11520 PF00753 Metallo-beta-lactamase superfamily AP3564_RS11530 PF01883 Iron-sulfur cluster assembly protein AP3564_RS11545 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS11550 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS11555 PF00501 AMP-binding enzyme AP3564_RS11555 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS11565 PF00501 AMP-binding enzyme AP3564_RS11565 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS11570 PF13382 Adenine deaminase C-terminal domain AP3564_RS11570 PF01979 Amidohydrolase family AP3564_RS11590 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS11595 PF00005 ABC transporter AP3564_RS11605 PF08281 Sigma-70, region 4 AP3564_RS11605 PF04542 Sigma-70 region 2 AP3564_RS11615 PF01063 Amino-transferase class IV AP3564_RS11630 PF04238 Protein of unknown function (DUF420) AP3564_RS11635 PF00582 Universal stress protein family AP3564_RS11665 PF13276 HTH-like domain AP3564_RS11665 PF00665 Integrase core domain AP3564_RS11665 PF13333 Integrase core domain AP3564_RS11690 PF01522 Polysaccharide deacetylase AP3564_RS11690 PF11738 Protein of unknown function (DUF3298) AP3564_RS11690 PF13739 Deacetylase PdaC AP3564_RS11700 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS11705 PF07486 Cell Wall Hydrolase AP3564_RS11725 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS11730 PF01609 Transposase DDE domain AP3564_RS11735 PF07561 Domain of Unknown Function (DUF1540) AP3564_RS11740 PF05036 Sporulation related domain AP3564_RS11740 PF01520 N-acetylmuramoyl-L-alanine amidase AP3564_RS11745 PF01497 Periplasmic binding protein AP3564_RS11750 PF01032 FecCD transport family AP3564_RS11755 PF00005 ABC transporter AP3564_RS11760 PF03186 CobD/Cbib protein AP3564_RS11765 PF00155 Aminotransferase class I and II AP3564_RS11770 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AP3564_RS11780 PF02654 Cobalamin-5-phosphate synthase AP3564_RS11805 PF13411 MerR HTH family regulatory protein AP3564_RS11810 PF01595 Cyclin M transmembrane N-terminal domain AP3564_RS11810 PF03471 Transporter associated domain AP3564_RS11810 PF00571 CBS domain AP3564_RS11815 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AP3564_RS11820 PF00361 Proton-conducting membrane transporter AP3564_RS11820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP3564_RS11825 PF10057 Uncharacterized conserved protein (DUF2294) AP3564_RS11830 PF13840 ACT domain AP3564_RS11830 PF00696 Amino acid kinase family AP3564_RS11835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS11835 PF00672 HAMP domain AP3564_RS11835 PF12729 Four helix bundle sensory module for signal transduction AP3564_RS11840 PF01047 MarR family AP3564_RS11845 PF00563 EAL domain AP3564_RS11845 PF03707 Bacterial signalling protein N terminal repeat AP3564_RS11845 PF00990 Diguanylate cyclase, GGDEF domain AP3564_RS11855 PF01068 ATP dependent DNA ligase domain AP3564_RS11860 PF00475 Imidazoleglycerol-phosphate dehydratase AP3564_RS11865 PF02735 Ku70/Ku80 beta-barrel domain AP3564_RS11870 PF02416 mttA/Hcf106 family AP3564_RS11875 PF00269 Small, acid-soluble spore proteins, alpha/beta type AP3564_RS11880 PF00571 CBS domain AP3564_RS11880 PF00005 ABC transporter AP3564_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS11890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AP3564_RS11910 PF08876 Domain of unknown function (DUF1836) AP3564_RS11915 PF02386 Cation transport protein AP3564_RS11920 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS11920 PF05223 NTF2-like N-terminal transpeptidase domain AP3564_RS11920 PF03717 Penicillin-binding Protein dimerisation domain AP3564_RS11930 PF04055 Radical SAM superfamily AP3564_RS11930 PF02310 B12 binding domain AP3564_RS11935 PF07729 FCD domain AP3564_RS11935 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS11940 PF02754 Cysteine-rich domain AP3564_RS11945 PF13183 4Fe-4S dicluster domain AP3564_RS11945 PF11870 Domain of unknown function (DUF3390) AP3564_RS11945 PF02589 LUD domain AP3564_RS11950 PF02589 LUD domain AP3564_RS11955 PF01757 Acyltransferase family AP3564_RS11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS11960 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS11960 PF00989 PAS fold AP3564_RS11960 PF13188 PAS domain AP3564_RS11960 PF13426 PAS domain AP3564_RS11965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AP3564_RS11965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AP3564_RS11970 PF05816 Toxic anion resistance protein (TelA) AP3564_RS11975 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein AP3564_RS11980 PF01906 Putative heavy-metal-binding AP3564_RS11985 PF09388 Spo0E like sporulation regulatory protein AP3564_RS11990 PF02535 ZIP Zinc transporter AP3564_RS12000 PF02743 Cache domain AP3564_RS12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS12000 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS12005 PF01047 MarR family AP3564_RS12020 PF00691 OmpA family AP3564_RS12020 PF13677 Membrane MotB of proton-channel complex MotA/MotB AP3564_RS12025 PF01618 MotA/TolQ/ExbB proton channel family AP3564_RS12030 PF07724 AAA domain (Cdc48 subfamily) AP3564_RS12030 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS12030 PF10431 C-terminal, D2-small domain, of ClpB protein AP3564_RS12030 PF17871 AAA lid domain AP3564_RS12040 PF00149 Calcineurin-like phosphoesterase AP3564_RS12045 PF06508 Queuosine biosynthesis protein QueC AP3564_RS12050 PF01242 6-pyruvoyl tetrahydropterin synthase AP3564_RS12055 PF04055 Radical SAM superfamily AP3564_RS12060 PF14489 QueF-like protein AP3564_RS12065 PF14489 QueF-like protein AP3564_RS12070 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AP3564_RS12085 PF03323 Bacillus/Clostridium GerA spore germination protein AP3564_RS12090 PF03845 Spore germination protein AP3564_RS12100 PF01943 Polysaccharide biosynthesis protein AP3564_RS12105 PF00578 AhpC/TSA family AP3564_RS12120 PF00565 Staphylococcal nuclease homologue AP3564_RS12125 PF00365 Phosphofructokinase AP3564_RS12145 PF16916 Dimerisation domain of Zinc Transporter AP3564_RS12145 PF01545 Cation efflux family AP3564_RS12150 PF03123 CAT RNA binding domain AP3564_RS12150 PF00874 PRD domain AP3564_RS12155 PF02378 Phosphotransferase system, EIIC AP3564_RS12155 PF00367 phosphotransferase system, EIIB AP3564_RS12155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AP3564_RS12160 PF00381 PTS HPr component phosphorylation site AP3564_RS12165 PF05524 PEP-utilising enzyme, N-terminal AP3564_RS12165 PF02896 PEP-utilising enzyme, TIM barrel domain AP3564_RS12165 PF00391 PEP-utilising enzyme, mobile domain AP3564_RS12170 PF00672 HAMP domain AP3564_RS12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS12170 PF02743 Cache domain AP3564_RS12180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AP3564_RS12180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP3564_RS12185 PF00188 Cysteine-rich secretory protein family AP3564_RS12190 PF03717 Penicillin-binding Protein dimerisation domain AP3564_RS12190 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS12195 PF00989 PAS fold AP3564_RS12195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS12195 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS12195 PF08447 PAS fold AP3564_RS12200 PF00155 Aminotransferase class I and II AP3564_RS12205 PF01544 CorA-like Mg2+ transporter protein AP3564_RS12220 PF00072 Response regulator receiver domain AP3564_RS12220 PF01584 CheW-like domain AP3564_RS12225 PF14177 YkyB-like protein AP3564_RS12230 PF01022 Bacterial regulatory protein, arsR family AP3564_RS12235 PF07690 Major Facilitator Superfamily AP3564_RS12240 PF00149 Calcineurin-like phosphoesterase AP3564_RS12240 PF10518 TAT (twin-arginine translocation) pathway signal sequence AP3564_RS12255 PF00563 EAL domain AP3564_RS12255 PF10388 EAL-domain associated signalling protein domain AP3564_RS12265 PF00005 ABC transporter AP3564_RS12275 PF01497 Periplasmic binding protein AP3564_RS12280 PF01032 FecCD transport family AP3564_RS12285 PF01032 FecCD transport family AP3564_RS12290 PF14156 Antirepressor AbbA AP3564_RS12300 PF07690 Major Facilitator Superfamily AP3564_RS12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS12305 PF03466 LysR substrate binding domain AP3564_RS12310 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AP3564_RS12310 PF14602 Hexapeptide repeat of succinyl-transferase AP3564_RS12310 PF00132 Bacterial transferase hexapeptide (six repeats) AP3564_RS12315 PF01546 Peptidase family M20/M25/M40 AP3564_RS12315 PF07687 Peptidase dimerisation domain AP3564_RS12320 PF00924 Mechanosensitive ion channel AP3564_RS12325 PF10417 C-terminal domain of 1-Cys peroxiredoxin AP3564_RS12325 PF00578 AhpC/TSA family AP3564_RS12330 PF00578 AhpC/TSA family AP3564_RS12340 PF01546 Peptidase family M20/M25/M40 AP3564_RS12340 PF07687 Peptidase dimerisation domain AP3564_RS12345 PF03070 TENA/THI-4/PQQC family AP3564_RS12350 PF03070 TENA/THI-4/PQQC family AP3564_RS12360 PF00005 ABC transporter AP3564_RS12375 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS12385 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP3564_RS12385 PF00005 ABC transporter AP3564_RS12390 PF00005 ABC transporter AP3564_RS12395 PF00547 Urease, gamma subunit AP3564_RS12400 PF00699 Urease beta subunit AP3564_RS12405 PF00449 Urease alpha-subunit, N-terminal domain AP3564_RS12405 PF01979 Amidohydrolase family AP3564_RS12410 PF02814 UreE urease accessory protein, N-terminal domain AP3564_RS12410 PF05194 UreE urease accessory protein, C-terminal domain AP3564_RS12415 PF01730 UreF AP3564_RS12420 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP3564_RS12425 PF01774 UreD urease accessory protein AP3564_RS12430 PF13386 Cytochrome C biogenesis protein transmembrane region AP3564_RS12435 PF01609 Transposase DDE domain AP3564_RS12450 PF00005 ABC transporter AP3564_RS12455 PF01979 Amidohydrolase family AP3564_RS12465 PF02633 Creatinine amidohydrolase AP3564_RS12485 PF01979 Amidohydrolase family AP3564_RS12490 PF07969 Amidohydrolase family AP3564_RS12495 PF03358 NADPH-dependent FMN reductase AP3564_RS12500 PF02625 XdhC and CoxI family AP3564_RS12500 PF13478 XdhC Rossmann domain AP3564_RS12510 PF00941 FAD binding domain in molybdopterin dehydrogenase AP3564_RS12515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AP3564_RS12515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AP3564_RS12520 PF00111 2Fe-2S iron-sulfur cluster binding domain AP3564_RS12520 PF01799 [2Fe-2S] binding domain AP3564_RS12535 PF00576 HIUase/Transthyretin family AP3564_RS12540 PF09349 OHCU decarboxylase AP3564_RS12540 PF01014 Uricase AP3564_RS12545 PF00860 Permease family AP3564_RS12550 PF17853 GGDEF-like domain AP3564_RS12550 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS12550 PF07905 Purine catabolism regulatory protein-like family AP3564_RS12555 PF01546 Peptidase family M20/M25/M40 AP3564_RS12560 PF00266 Aminotransferase class-V AP3564_RS12565 PF01979 Amidohydrolase family AP3564_RS12580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS12580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS12590 PF00271 Helicase conserved C-terminal domain AP3564_RS12590 PF04851 Type III restriction enzyme, res subunit AP3564_RS12625 PF00145 C-5 cytosine-specific DNA methylase AP3564_RS12635 PF01546 Peptidase family M20/M25/M40 AP3564_RS12635 PF07687 Peptidase dimerisation domain AP3564_RS12665 PF08220 DeoR-like helix-turn-helix domain AP3564_RS12665 PF00455 DeoR C terminal sensor domain AP3564_RS12670 PF00294 pfkB family carbohydrate kinase AP3564_RS12675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AP3564_RS12675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AP3564_RS12695 PF07685 CobB/CobQ-like glutamine amidotransferase domain AP3564_RS12695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AP3564_RS12705 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS12705 PF05651 Putative sugar diacid recognition AP3564_RS12705 PF17853 GGDEF-like domain AP3564_RS12710 PF01979 Amidohydrolase family AP3564_RS12710 PF13382 Adenine deaminase C-terminal domain AP3564_RS12715 PF02417 Chromate transporter AP3564_RS12720 PF02417 Chromate transporter AP3564_RS12725 PF13404 AsnC-type helix-turn-helix domain AP3564_RS12725 PF01037 Lrp/AsnC ligand binding domain AP3564_RS12750 PF01555 DNA methylase AP3564_RS12760 PF13732 Domain of unknown function (DUF4162) AP3564_RS12760 PF00005 ABC transporter AP3564_RS12765 PF00005 ABC transporter AP3564_RS12770 PF07702 UTRA domain AP3564_RS12770 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS12785 PF03190 Protein of unknown function, DUF255 AP3564_RS12790 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AP3564_RS12790 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AP3564_RS12805 PF00325 Bacterial regulatory proteins, crp family AP3564_RS12805 PF00027 Cyclic nucleotide-binding domain AP3564_RS12820 PF04893 Yip1 domain AP3564_RS12825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AP3564_RS12830 PF00005 ABC transporter AP3564_RS12835 PF12704 MacB-like periplasmic core domain AP3564_RS12835 PF02687 FtsX-like permease family AP3564_RS12840 PF01098 Cell cycle protein AP3564_RS12865 PF02073 Thermophilic metalloprotease (M29) AP3564_RS12870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS12870 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS12870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS12875 PF07690 Major Facilitator Superfamily AP3564_RS12880 PF01297 Zinc-uptake complex component A periplasmic AP3564_RS12880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AP3564_RS12885 PF01925 Sulfite exporter TauE/SafE AP3564_RS12890 PF03466 LysR substrate binding domain AP3564_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS12895 PF02146 Sir2 family AP3564_RS12905 PF02254 TrkA-N domain AP3564_RS12905 PF02080 TrkA-C domain AP3564_RS12910 PF00753 Metallo-beta-lactamase superfamily AP3564_RS12910 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AP3564_RS12910 PF17770 Ribonuclease J C-terminal domain AP3564_RS12915 PF07288 Protein of unknown function (DUF1447) AP3564_RS12925 PF01327 Polypeptide deformylase AP3564_RS12935 PF00676 Dehydrogenase E1 component AP3564_RS12940 PF02779 Transketolase, pyrimidine binding domain AP3564_RS12940 PF02780 Transketolase, C-terminal domain AP3564_RS12945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS12945 PF00364 Biotin-requiring enzyme AP3564_RS12945 PF02817 e3 binding domain AP3564_RS12950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS12950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP3564_RS12965 PF01381 Helix-turn-helix AP3564_RS12985 PF00005 ABC transporter AP3564_RS13010 PF13790 SR1 protein AP3564_RS13020 PF00892 EamA-like transporter family AP3564_RS13025 PF01276 Orn/Lys/Arg decarboxylase, major domain AP3564_RS13025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AP3564_RS13045 PF03060 Nitronate monooxygenase AP3564_RS13050 PF06335 Protein of unknown function (DUF1054) AP3564_RS13055 PF00459 Inositol monophosphatase family AP3564_RS13065 PF03144 Elongation factor Tu domain 2 AP3564_RS13065 PF00009 Elongation factor Tu GTP binding domain AP3564_RS13065 PF14492 Elongation Factor G, domain II AP3564_RS13065 PF00679 Elongation factor G C-terminus AP3564_RS13070 PF14036 YlaH-like protein AP3564_RS13075 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AP3564_RS13080 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AP3564_RS13085 PF02562 PhoH-like protein AP3564_RS13085 PF13638 PIN domain AP3564_RS13095 PF07408 Protein of unknown function (DUF1507) AP3564_RS13100 PF01098 Cell cycle protein AP3564_RS13105 PF00289 Biotin carboxylase, N-terminal domain AP3564_RS13105 PF00682 HMGL-like AP3564_RS13105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS13105 PF00364 Biotin-requiring enzyme AP3564_RS13105 PF02785 Biotin carboxylase C-terminal domain AP3564_RS13105 PF02436 Conserved carboxylase domain AP3564_RS13120 PF00350 Dynamin family AP3564_RS13125 PF10752 Protein of unknown function (DUF2533) AP3564_RS13130 PF13456 Reverse transcriptase-like AP3564_RS13135 PF10782 Zinc-finger AP3564_RS13140 PF00313 'Cold-shock' DNA-binding domain AP3564_RS13145 PF00534 Glycosyl transferases group 1 AP3564_RS13145 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AP3564_RS13150 PF04204 Homoserine O-succinyltransferase AP3564_RS13155 PF00255 Glutathione peroxidase AP3564_RS13160 PF13769 Virulence factor AP3564_RS13160 PF08712 Scaffold protein Nfu/NifU N terminal AP3564_RS13165 PF06491 Disulphide isomerase AP3564_RS13170 PF14005 YpjP-like protein AP3564_RS13175 PF04608 Phosphatidylglycerophosphatase A AP3564_RS13180 PF00303 Thymidylate synthase AP3564_RS13185 PF00186 Dihydrofolate reductase AP3564_RS13190 PF00585 C-terminal regulatory domain of Threonine dehydratase AP3564_RS13190 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS13195 PF10751 Protein of unknown function (DUF2535) AP3564_RS13200 PF02645 Uncharacterised protein, DegV family COG1307 AP3564_RS13205 PF02630 SCO1/SenC AP3564_RS13210 PF01609 Transposase DDE domain AP3564_RS13225 PF09299 Mu transposase, C-terminal AP3564_RS13225 PF00665 Integrase core domain AP3564_RS13240 PF13472 GDSL-like Lipase/Acylhydrolase family AP3564_RS13245 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) AP3564_RS13250 PF01189 16S rRNA methyltransferase RsmB/F AP3564_RS13250 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AP3564_RS13250 PF17126 RsmF rRNA methyltransferase first C-terminal domain AP3564_RS13255 PF17431 Uncharacterized YmpT-like AP3564_RS13260 PF07690 Major Facilitator Superfamily AP3564_RS13265 PF01625 Peptide methionine sulfoxide reductase AP3564_RS13265 PF01641 SelR domain AP3564_RS13280 PF04055 Radical SAM superfamily AP3564_RS13280 PF06968 Biotin and Thiamin Synthesis associated domain AP3564_RS13285 PF06855 YozE SAM-like fold AP3564_RS13300 PF00069 Protein kinase domain AP3564_RS13305 PF07070 SpoOM protein AP3564_RS13315 PF01569 PAP2 superfamily AP3564_RS13320 PF14191 YodL-like AP3564_RS13325 PF01048 Phosphorylase superfamily AP3564_RS13330 PF02557 D-alanyl-D-alanine carboxypeptidase AP3564_RS13335 PF03572 Peptidase family S41 AP3564_RS13335 PF17820 PDZ domain AP3564_RS13335 PF01471 Putative peptidoglycan binding domain AP3564_RS13355 PF00892 EamA-like transporter family AP3564_RS13365 PF08830 Protein of unknown function (DUF1806) AP3564_RS13370 PF02585 GlcNAc-PI de-N-acetylase AP3564_RS13375 PF00877 NlpC/P60 family AP3564_RS13375 PF01476 LysM domain AP3564_RS13400 PF00324 Amino acid permease AP3564_RS13405 PF07728 AAA domain (dynein-related subfamily) AP3564_RS13410 PF00092 von Willebrand factor type A domain AP3564_RS13415 PF16870 2-oxoglutarate dehydrogenase C-terminal AP3564_RS13415 PF00676 Dehydrogenase E1 component AP3564_RS13415 PF16078 2-oxoglutarate dehydrogenase N-terminus AP3564_RS13415 PF02779 Transketolase, pyrimidine binding domain AP3564_RS13420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS13420 PF00364 Biotin-requiring enzyme AP3564_RS13420 PF02817 e3 binding domain AP3564_RS13430 PF01256 Carbohydrate kinase AP3564_RS13435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AP3564_RS13435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AP3564_RS13445 PF00171 Aldehyde dehydrogenase family AP3564_RS13455 PF11007 Spore coat associated protein JA (CotJA) AP3564_RS13460 PF12652 CotJB protein AP3564_RS13465 PF05067 Manganese containing catalase AP3564_RS13475 PF00005 ABC transporter AP3564_RS13475 PF03459 TOBE domain AP3564_RS13490 PF02334 Replication terminator protein AP3564_RS13510 PF09560 Sporulation protein YunB (Spo_YunB) AP3564_RS13525 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AP3564_RS13530 PF07451 Stage V sporulation protein AD (SpoVAD) AP3564_RS13535 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AP3564_RS13545 PF04239 Protein of unknown function (DUF421) AP3564_RS13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS13565 PF00920 Dehydratase family AP3564_RS13570 PF00474 Sodium:solute symporter family AP3564_RS13580 PF01625 Peptide methionine sulfoxide reductase AP3564_RS13605 PF01554 MatE AP3564_RS13615 PF07690 Major Facilitator Superfamily AP3564_RS13620 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS13625 PF00873 AcrB/AcrD/AcrF family AP3564_RS13640 PF00753 Metallo-beta-lactamase superfamily AP3564_RS13650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS13675 PF00171 Aldehyde dehydrogenase family AP3564_RS13680 PF02583 Metal-sensitive transcriptional repressor AP3564_RS13685 PF00403 Heavy-metal-associated domain AP3564_RS13690 PF00403 Heavy-metal-associated domain AP3564_RS13725 PF01966 HD domain AP3564_RS13755 PF07690 Major Facilitator Superfamily AP3564_RS13765 PF00056 lactate/malate dehydrogenase, NAD binding domain AP3564_RS13765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AP3564_RS13770 PF03473 MOSC domain AP3564_RS13770 PF03475 3-alpha domain AP3564_RS13790 PF03972 MmgE/PrpD family AP3564_RS13795 PF00285 Citrate synthase, C-terminal domain AP3564_RS13805 PF02541 Ppx/GppA phosphatase family AP3564_RS13810 PF17941 Polyphosphate kinase C-terminal domain 1 AP3564_RS13810 PF13090 Polyphosphate kinase C-terminal domain 2 AP3564_RS13810 PF13089 Polyphosphate kinase N-terminal domain AP3564_RS13810 PF02503 Polyphosphate kinase middle domain AP3564_RS13815 PF00248 Aldo/keto reductase family AP3564_RS13820 PF01266 FAD dependent oxidoreductase AP3564_RS13820 PF00355 Rieske [2Fe-2S] domain AP3564_RS13825 PF06580 Histidine kinase AP3564_RS13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS13825 PF07694 5TMR of 5TMR-LYT AP3564_RS13825 PF13492 GAF domain AP3564_RS13830 PF00072 Response regulator receiver domain AP3564_RS13830 PF04397 LytTr DNA-binding domain AP3564_RS13835 PF13722 5TM C-terminal transporter carbon starvation CstA AP3564_RS13835 PF02554 Carbon starvation protein CstA AP3564_RS13840 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS13845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP3564_RS13845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP3564_RS13850 PF01790 Prolipoprotein diacylglyceryl transferase AP3564_RS13855 PF04055 Radical SAM superfamily AP3564_RS13855 PF13186 Iron-sulfur cluster-binding domain AP3564_RS13870 PF13977 BetI-type transcriptional repressor, C-terminal AP3564_RS13870 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS13885 PF01323 DSBA-like thioredoxin domain AP3564_RS13900 PF08281 Sigma-70, region 4 AP3564_RS13900 PF04542 Sigma-70 region 2 AP3564_RS13910 PF01047 MarR family AP3564_RS13915 PF03176 MMPL family AP3564_RS13920 PF01476 LysM domain AP3564_RS13920 PF00704 Glycosyl hydrolases family 18 AP3564_RS13935 PF00313 'Cold-shock' DNA-binding domain AP3564_RS13940 PF01131 DNA topoisomerase AP3564_RS13940 PF01751 Toprim domain AP3564_RS13945 PF02558 Ketopantoate reductase PanE/ApbA AP3564_RS13945 PF08546 Ketopantoate reductase PanE/ApbA C terminal AP3564_RS13965 PF07690 Major Facilitator Superfamily AP3564_RS13995 PF00487 Fatty acid desaturase AP3564_RS14000 PF07730 Histidine kinase AP3564_RS14005 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS14005 PF00072 Response regulator receiver domain AP3564_RS14015 PF00753 Metallo-beta-lactamase superfamily AP3564_RS14015 PF00581 Rhodanese-like domain AP3564_RS14025 PF01595 Cyclin M transmembrane N-terminal domain AP3564_RS14025 PF00571 CBS domain AP3564_RS14025 PF03471 Transporter associated domain AP3564_RS14035 PF00849 RNA pseudouridylate synthase AP3564_RS14035 PF01479 S4 domain AP3564_RS14040 PF17326 Family of unknown function (DUF5365) AP3564_RS14050 PF02600 Disulfide bond formation protein DsbB AP3564_RS14055 PF00128 Alpha amylase, catalytic domain AP3564_RS14060 PF00571 CBS domain AP3564_RS14070 PF00106 short chain dehydrogenase AP3564_RS14075 PF13185 GAF domain AP3564_RS14075 PF07730 Histidine kinase AP3564_RS14080 PF00072 Response regulator receiver domain AP3564_RS14080 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS14085 PF00144 Beta-lactamase AP3564_RS14090 PF00128 Alpha amylase, catalytic domain AP3564_RS14090 PF16657 Maltogenic Amylase, C-terminal domain AP3564_RS14100 PF04328 Selenoprotein, putative AP3564_RS14110 PF01266 FAD dependent oxidoreductase AP3564_RS14115 PF02597 ThiS family AP3564_RS14120 PF05690 Thiazole biosynthesis protein ThiG AP3564_RS14135 PF00005 ABC transporter AP3564_RS14135 PF17912 MalK OB fold domain AP3564_RS14135 PF03459 TOBE domain AP3564_RS14140 PF13556 PucR C-terminal helix-turn-helix domain AP3564_RS14165 PF13537 Glutamine amidotransferase domain AP3564_RS14165 PF00733 Asparagine synthase AP3564_RS14170 PF01554 MatE AP3564_RS14175 PF02311 AraC-like ligand binding domain AP3564_RS14175 PF12833 Helix-turn-helix domain AP3564_RS14180 PF16657 Maltogenic Amylase, C-terminal domain AP3564_RS14180 PF02903 Alpha amylase, N-terminal ig-like domain AP3564_RS14180 PF00128 Alpha amylase, catalytic domain AP3564_RS14185 PF13416 Bacterial extracellular solute-binding protein AP3564_RS14190 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS14200 PF00128 Alpha amylase, catalytic domain AP3564_RS14200 PF02903 Alpha amylase, N-terminal ig-like domain AP3564_RS14205 PF16338 Domain of unknown function (DUF4968) AP3564_RS14205 PF17137 Domain of unknown function (DUF5110) AP3564_RS14205 PF01055 Glycosyl hydrolases family 31 AP3564_RS14205 PF13802 Galactose mutarotase-like AP3564_RS14210 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS14215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP3564_RS14215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AP3564_RS14225 PF01527 Transposase AP3564_RS14230 PF00795 Carbon-nitrogen hydrolase AP3564_RS14230 PF00583 Acetyltransferase (GNAT) family AP3564_RS14250 PF02583 Metal-sensitive transcriptional repressor AP3564_RS14255 PF01206 Sulfurtransferase TusA AP3564_RS14260 PF13686 DsrE/DsrF/DrsH-like family AP3564_RS14270 PF00582 Universal stress protein family AP3564_RS14275 PF03601 Conserved hypothetical protein 698 AP3564_RS14290 PF02683 Cytochrome C biogenesis protein transmembrane region AP3564_RS14295 PF00578 AhpC/TSA family AP3564_RS14300 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS14300 PF00072 Response regulator receiver domain AP3564_RS14305 PF00672 HAMP domain AP3564_RS14305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS14305 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS14310 PF00704 Glycosyl hydrolases family 18 AP3564_RS14310 PF01476 LysM domain AP3564_RS14315 PF13686 DsrE/DsrF/DrsH-like family AP3564_RS14325 PF00581 Rhodanese-like domain AP3564_RS14325 PF00753 Metallo-beta-lactamase superfamily AP3564_RS14330 PF01209 ubiE/COQ5 methyltransferase family AP3564_RS14340 PF02583 Metal-sensitive transcriptional repressor AP3564_RS14345 PF01206 Sulfurtransferase TusA AP3564_RS14350 PF13686 DsrE/DsrF/DrsH-like family AP3564_RS14360 PF00581 Rhodanese-like domain AP3564_RS14365 PF01206 Sulfurtransferase TusA AP3564_RS14365 PF00581 Rhodanese-like domain AP3564_RS14370 PF00581 Rhodanese-like domain AP3564_RS14370 PF00753 Metallo-beta-lactamase superfamily AP3564_RS14375 PF01206 Sulfurtransferase TusA AP3564_RS14380 PF01925 Sulfite exporter TauE/SafE AP3564_RS14405 PF03466 LysR substrate binding domain AP3564_RS14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS14420 PF00403 Heavy-metal-associated domain AP3564_RS14425 PF00403 Heavy-metal-associated domain AP3564_RS14470 PF00171 Aldehyde dehydrogenase family AP3564_RS14470 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS14495 PF04463 Protein of unknown function (DUF523) AP3564_RS14505 PF03744 6-carboxyhexanoate--CoA ligase AP3564_RS14515 PF00155 Aminotransferase class I and II AP3564_RS14525 PF00989 PAS fold AP3564_RS14525 PF00158 Sigma-54 interaction domain AP3564_RS14525 PF02954 Bacterial regulatory protein, Fis family AP3564_RS14530 PF00753 Metallo-beta-lactamase superfamily AP3564_RS14535 PF00465 Iron-containing alcohol dehydrogenase AP3564_RS14550 PF01022 Bacterial regulatory protein, arsR family AP3564_RS14555 PF11188 Protein of unknown function (DUF2975) AP3564_RS14560 PF13443 Cro/C1-type HTH DNA-binding domain AP3564_RS14585 PF01758 Sodium Bile acid symporter family AP3564_RS14595 PF08378 Nuclease-related domain AP3564_RS14600 PF00005 ABC transporter AP3564_RS14600 PF12848 ABC transporter AP3564_RS14600 PF16326 ABC transporter C-terminal domain AP3564_RS14605 PF08241 Methyltransferase domain AP3564_RS14610 PF00005 ABC transporter AP3564_RS14620 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS14620 PF08359 YsiA-like protein, C-terminal region AP3564_RS14625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AP3564_RS14625 PF02770 Acyl-CoA dehydrogenase, middle domain AP3564_RS14625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AP3564_RS14630 PF00501 AMP-binding enzyme AP3564_RS14630 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS14635 PF00289 Biotin carboxylase, N-terminal domain AP3564_RS14635 PF02785 Biotin carboxylase C-terminal domain AP3564_RS14635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS14640 PF00364 Biotin-requiring enzyme AP3564_RS14645 PF00682 HMGL-like AP3564_RS14650 PF00378 Enoyl-CoA hydratase/isomerase AP3564_RS14655 PF01039 Carboxyl transferase domain AP3564_RS14660 PF03459 TOBE domain AP3564_RS14660 PF00005 ABC transporter AP3564_RS14665 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS14670 PF12728 Helix-turn-helix domain AP3564_RS14670 PF12727 PBP superfamily domain AP3564_RS14685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS14690 PF01980 tRNA-methyltransferase O AP3564_RS14690 PF18389 TrmO C-terminal domain AP3564_RS14705 PF00106 short chain dehydrogenase AP3564_RS14720 PF00005 ABC transporter AP3564_RS14720 PF09383 NIL domain AP3564_RS14730 PF09383 NIL domain AP3564_RS14730 PF00005 ABC transporter AP3564_RS14735 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS14740 PF01022 Bacterial regulatory protein, arsR family AP3564_RS14745 PF01758 Sodium Bile acid symporter family AP3564_RS14750 PF01451 Low molecular weight phosphotyrosine protein phosphatase AP3564_RS14755 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS14755 PF00155 Aminotransferase class I and II AP3564_RS14760 PF01810 LysE type translocator AP3564_RS14765 PF00266 Aminotransferase class-V AP3564_RS14770 PF01726 LexA DNA binding domain AP3564_RS14770 PF00717 Peptidase S24-like AP3564_RS14775 PF13847 Methyltransferase domain AP3564_RS14815 PF13007 Transposase C of IS166 homeodomain AP3564_RS14815 PF03050 Transposase IS66 family AP3564_RS14815 PF13817 IS66 C-terminal element AP3564_RS14815 PF13005 zinc-finger binding domain of transposase IS66 AP3564_RS14830 PF13520 Amino acid permease AP3564_RS14835 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS14840 PF00005 ABC transporter AP3564_RS14860 PF00665 Integrase core domain AP3564_RS14860 PF09299 Mu transposase, C-terminal AP3564_RS14885 PF00072 Response regulator receiver domain AP3564_RS14885 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS14890 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS14910 PF00005 ABC transporter AP3564_RS14915 PF00107 Zinc-binding dehydrogenase AP3564_RS14915 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS14925 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS14930 PF00106 short chain dehydrogenase AP3564_RS14935 PF12833 Helix-turn-helix domain AP3564_RS14935 PF06719 AraC-type transcriptional regulator N-terminus AP3564_RS14940 PF00248 Aldo/keto reductase family AP3564_RS14980 PF03649 Uncharacterised protein family (UPF0014) AP3564_RS15000 PF01967 MoaC family AP3564_RS15015 PF02391 MoaE protein AP3564_RS15020 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AP3564_RS15025 PF03454 MoeA C-terminal region (domain IV) AP3564_RS15025 PF03453 MoeA N-terminal region (domain I and II) AP3564_RS15025 PF00994 Probable molybdopterin binding domain AP3564_RS15030 PF12804 MobA-like NTP transferase domain AP3564_RS15035 PF00994 Probable molybdopterin binding domain AP3564_RS15065 PF01883 Iron-sulfur cluster assembly protein AP3564_RS15075 PF13186 Iron-sulfur cluster-binding domain AP3564_RS15075 PF04055 Radical SAM superfamily AP3564_RS15080 PF00325 Bacterial regulatory proteins, crp family AP3564_RS15080 PF00027 Cyclic nucleotide-binding domain AP3564_RS15090 PF14256 YwiC-like protein AP3564_RS15095 PF04405 Domain of Unknown function (DUF542) AP3564_RS15095 PF01814 Hemerythrin HHE cation binding domain AP3564_RS15105 PF03989 DNA gyrase C-terminal domain, beta-propeller AP3564_RS15105 PF00521 DNA gyrase/topoisomerase IV, subunit A AP3564_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS15110 PF00986 DNA gyrase B subunit, carboxyl terminus AP3564_RS15110 PF00204 DNA gyrase B AP3564_RS15110 PF01751 Toprim domain AP3564_RS15115 PF13380 CoA binding domain AP3564_RS15120 PF02660 Glycerol-3-phosphate acyltransferase AP3564_RS15125 PF00929 Exonuclease AP3564_RS15125 PF04851 Type III restriction enzyme, res subunit AP3564_RS15125 PF13307 Helicase C-terminal domain AP3564_RS15135 PF00909 Ammonium Transporter Family AP3564_RS15140 PF09587 Bacterial capsule synthesis protein PGA_cap AP3564_RS15145 PF01521 Iron-sulphur cluster biosynthesis AP3564_RS15155 PF03061 Thioesterase superfamily AP3564_RS15165 PF08177 Small acid-soluble spore protein N family AP3564_RS15175 PF00578 AhpC/TSA family AP3564_RS15180 PF00330 Aconitase family (aconitate hydratase) AP3564_RS15180 PF00694 Aconitase C-terminal domain AP3564_RS15190 PF08179 Small acid-soluble spore protein P family AP3564_RS15200 PF11084 Protein of unknown function (DUF2621) AP3564_RS15205 PF07301 Protein of unknown function (DUF1453) AP3564_RS15210 PF00072 Response regulator receiver domain AP3564_RS15215 PF02683 Cytochrome C biogenesis protein transmembrane region AP3564_RS15220 PF03672 Uncharacterised protein family (UPF0154) AP3564_RS15225 PF10747 Sporulation inhibitor of replication protein SirA AP3564_RS15230 PF02779 Transketolase, pyrimidine binding domain AP3564_RS15230 PF02780 Transketolase, C-terminal domain AP3564_RS15230 PF00456 Transketolase, thiamine diphosphate binding domain AP3564_RS15235 PF05979 Bacterial protein of unknown function (DUF896) AP3564_RS15240 PF00239 Resolvase, N terminal domain AP3564_RS15245 PF01476 LysM domain AP3564_RS15250 PF00717 Peptidase S24-like AP3564_RS15250 PF01726 LexA DNA binding domain AP3564_RS15255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AP3564_RS15255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP3564_RS15260 PF01553 Acyltransferase AP3564_RS15265 PF03641 Possible lysine decarboxylase AP3564_RS15270 PF00248 Aldo/keto reductase family AP3564_RS15275 PF01738 Dienelactone hydrolase family AP3564_RS15280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP3564_RS15290 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS15290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AP3564_RS15315 PF07730 Histidine kinase AP3564_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS15320 PF00072 Response regulator receiver domain AP3564_RS15320 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS15325 PF13344 Haloacid dehalogenase-like hydrolase AP3564_RS15325 PF00293 NUDIX domain AP3564_RS15330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS15330 PF00672 HAMP domain AP3564_RS15330 PF02743 Cache domain AP3564_RS15335 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AP3564_RS15335 PF13542 Helix-turn-helix domain of transposase family ISL3 AP3564_RS15335 PF01610 Transposase AP3564_RS15340 PF00563 EAL domain AP3564_RS15340 PF12792 CSS motif domain associated with EAL AP3564_RS15345 PF01381 Helix-turn-helix AP3564_RS15370 PF05145 Transition state regulatory protein AbrB AP3564_RS15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS15375 PF03466 LysR substrate binding domain AP3564_RS15390 PF00171 Aldehyde dehydrogenase family AP3564_RS15395 PF00072 Response regulator receiver domain AP3564_RS15395 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS15400 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS15400 PF00672 HAMP domain AP3564_RS15410 PF01891 Cobalt uptake substrate-specific transmembrane region AP3564_RS15445 PF00005 ABC transporter AP3564_RS15460 PF01610 Transposase AP3564_RS15460 PF13542 Helix-turn-helix domain of transposase family ISL3 AP3564_RS15460 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AP3564_RS15465 PF01609 Transposase DDE domain AP3564_RS15485 PF00106 short chain dehydrogenase AP3564_RS15500 PF05675 Protein of unknown function (DUF817) AP3564_RS15510 PF01741 Large-conductance mechanosensitive channel, MscL AP3564_RS15605 PF00535 Glycosyl transferase family 2 AP3564_RS15615 PF00990 Diguanylate cyclase, GGDEF domain AP3564_RS15615 PF00072 Response regulator receiver domain AP3564_RS15620 PF01584 CheW-like domain AP3564_RS15620 PF00072 Response regulator receiver domain AP3564_RS15630 PF01385 Probable transposase AP3564_RS15630 PF12323 Helix-turn-helix domain AP3564_RS15630 PF07282 Putative transposase DNA-binding domain AP3564_RS15715 PF00872 Transposase, Mutator family AP3564_RS15745 PF00294 pfkB family carbohydrate kinase AP3564_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS15775 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS15780 PF01547 Bacterial extracellular solute-binding protein AP3564_RS15795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AP3564_RS15795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AP3564_RS15800 PF07702 UTRA domain AP3564_RS15800 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS15810 PF01380 SIS domain AP3564_RS15825 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS15825 PF13361 UvrD-like helicase C-terminal domain AP3564_RS15835 PF00580 UvrD/REP helicase N-terminal domain AP3564_RS15835 PF13361 UvrD-like helicase C-terminal domain AP3564_RS15835 PF12705 PD-(D/E)XK nuclease superfamily AP3564_RS15840 PF04851 Type III restriction enzyme, res subunit AP3564_RS15840 PF08774 VRR-NUC domain AP3564_RS15845 PF01555 DNA methylase AP3564_RS15845 PF18273 Type III R-M EcoP15I C-terminal domain AP3564_RS15915 PF00664 ABC transporter transmembrane region AP3564_RS15915 PF00005 ABC transporter AP3564_RS15960 PF02447 GntP family permease AP3564_RS15965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS15965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS15970 PF00356 Bacterial regulatory proteins, lacI family AP3564_RS15975 PF13190 PDGLE domain AP3564_RS15975 PF01891 Cobalt uptake substrate-specific transmembrane region AP3564_RS15980 PF02361 Cobalt transport protein AP3564_RS15985 PF00005 ABC transporter AP3564_RS16005 PF12704 MacB-like periplasmic core domain AP3564_RS16005 PF02687 FtsX-like permease family AP3564_RS16005 PF00005 ABC transporter AP3564_RS16015 PF12431 Transcriptional regulator AP3564_RS16015 PF00072 Response regulator receiver domain AP3564_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS16020 PF00989 PAS fold AP3564_RS16020 PF17203 Single cache domain 3 AP3564_RS16020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AP3564_RS16025 PF01970 Tripartite tricarboxylate transporter TctA family AP3564_RS16035 PF03401 Tripartite tricarboxylate transporter family receptor AP3564_RS16045 PF00296 Luciferase-like monooxygenase AP3564_RS16050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_RS16050 PF02272 DHHA1 domain AP3564_RS16050 PF01411 tRNA synthetases class II (A) AP3564_RS16060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS16060 PF00289 Biotin carboxylase, N-terminal domain AP3564_RS16060 PF02785 Biotin carboxylase C-terminal domain AP3564_RS16065 PF00364 Biotin-requiring enzyme AP3564_RS16070 PF02436 Conserved carboxylase domain AP3564_RS16070 PF00682 HMGL-like AP3564_RS16070 PF00364 Biotin-requiring enzyme AP3564_RS16075 PF00501 AMP-binding enzyme AP3564_RS16075 PF14535 AMP-binding enzyme C-terminal domain AP3564_RS16080 PF09339 IclR helix-turn-helix domain AP3564_RS16080 PF01614 Bacterial transcriptional regulator AP3564_RS16085 PF01614 Bacterial transcriptional regulator AP3564_RS16085 PF09339 IclR helix-turn-helix domain AP3564_RS16125 PF13276 HTH-like domain AP3564_RS16125 PF00665 Integrase core domain AP3564_RS16125 PF13333 Integrase core domain AP3564_RS16130 PF00665 Integrase core domain AP3564_RS16130 PF13333 Integrase core domain AP3564_RS16130 PF13276 HTH-like domain AP3564_RS16145 PF00082 Subtilase family AP3564_RS16195 PF03951 Glutamine synthetase, beta-Grasp domain AP3564_RS16195 PF00120 Glutamine synthetase, catalytic domain AP3564_RS16200 PF13411 MerR HTH family regulatory protein AP3564_RS16210 PF06838 Methionine gamma-lyase AP3564_RS16215 PF13167 GTP-binding GTPase N-terminal AP3564_RS16215 PF01926 50S ribosome-binding GTPase AP3564_RS16215 PF16360 GTP-binding GTPase Middle Region AP3564_RS16220 PF17866 AAA lid domain AP3564_RS16220 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS16225 PF17209 Hfq protein AP3564_RS16235 PF01119 DNA mismatch repair protein, C-terminal domain AP3564_RS16235 PF08676 MutL C terminal dimerisation domain AP3564_RS16240 PF05192 MutS domain III AP3564_RS16240 PF05188 MutS domain II AP3564_RS16240 PF00488 MutS domain V AP3564_RS16240 PF05190 MutS family domain IV AP3564_RS16240 PF01624 MutS domain I AP3564_RS16245 PF10628 Outer spore coat protein E (CotE) AP3564_RS16250 PF06133 Control of competence regulator ComK, YlbF/YmcA AP3564_RS16255 PF00919 Uncharacterized protein family UPF0004 AP3564_RS16255 PF04055 Radical SAM superfamily AP3564_RS16255 PF01938 TRAM domain AP3564_RS16260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP3564_RS16270 PF04232 Stage V sporulation protein S (SpoVS) AP3564_RS16275 PF13277 YmdB-like protein AP3564_RS16280 PF12072 Domain of unknown function (DUF3552) AP3564_RS16280 PF01966 HD domain AP3564_RS16280 PF00013 KH domain AP3564_RS16285 PF00154 recA bacterial DNA recombination protein AP3564_RS16290 PF02464 Competence-damaged protein AP3564_RS16290 PF18146 Damage-inducible protein CinA KH domain AP3564_RS16290 PF00994 Probable molybdopterin binding domain AP3564_RS16295 PF01066 CDP-alcohol phosphatidyltransferase AP3564_RS16300 PF13464 Domain of unknown function (DUF4115) AP3564_RS16305 PF11868 Protein of unknown function (DUF3388) AP3564_RS16310 PF11588 Protein of unknown function (DUF3243) AP3564_RS16320 PF00675 Insulinase (Peptidase family M16) AP3564_RS16320 PF05193 Peptidase M16 inactive domain AP3564_RS16325 PF05193 Peptidase M16 inactive domain AP3564_RS16340 PF01609 Transposase DDE domain AP3564_RS16345 PF01580 FtsK/SpoIIIE family AP3564_RS16345 PF09397 Ftsk gamma domain AP3564_RS16345 PF17854 FtsK alpha domain AP3564_RS16350 PF14035 YlzJ-like protein AP3564_RS16355 PF00574 Clp protease AP3564_RS16360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AP3564_RS16360 PF00753 Metallo-beta-lactamase superfamily AP3564_RS16360 PF17770 Ribonuclease J C-terminal domain AP3564_RS16365 PF00701 Dihydrodipicolinate synthetase family AP3564_RS16370 PF00696 Amino acid kinase family AP3564_RS16370 PF13840 ACT domain AP3564_RS16375 PF01118 Semialdehyde dehydrogenase, NAD binding domain AP3564_RS16375 PF02774 Semialdehyde dehydrogenase, dimerisation domain AP3564_RS16380 PF02441 Flavoprotein AP3564_RS16385 PF16924 Dipicolinate synthase subunit A N-terminal domain AP3564_RS16385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AP3564_RS16390 PF05239 PRC-barrel domain AP3564_RS16395 PF05193 Peptidase M16 inactive domain AP3564_RS16395 PF00675 Insulinase (Peptidase family M16) AP3564_RS16400 PF01522 Polysaccharide deacetylase AP3564_RS16405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AP3564_RS16405 PF00013 KH domain AP3564_RS16405 PF03725 3' exoribonuclease family, domain 2 AP3564_RS16405 PF01138 3' exoribonuclease family, domain 1 AP3564_RS16405 PF00575 S1 RNA binding domain AP3564_RS16410 PF00312 Ribosomal protein S15 AP3564_RS16415 PF06574 FAD synthetase AP3564_RS16415 PF01687 Riboflavin kinase AP3564_RS16420 PF01509 TruB family pseudouridylate synthase (N terminal domain) AP3564_RS16420 PF16198 tRNA pseudouridylate synthase B C-terminal domain AP3564_RS16425 PF02033 Ribosome-binding factor A AP3564_RS16430 PF04456 Protein of unknown function (DUF503) AP3564_RS16435 PF00009 Elongation factor Tu GTP binding domain AP3564_RS16435 PF11987 Translation-initiation factor 2 AP3564_RS16435 PF04760 Translation initiation factor IF-2, N-terminal region AP3564_RS16440 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AP3564_RS16445 PF04296 Protein of unknown function (DUF448) AP3564_RS16450 PF08529 NusA N-terminal domain AP3564_RS16450 PF00575 S1 RNA binding domain AP3564_RS16450 PF13184 NusA-like KH domain AP3564_RS16455 PF02576 RimP N-terminal domain AP3564_RS16455 PF17384 RimP C-terminal SH3 domain AP3564_RS16460 PF07733 Bacterial DNA polymerase III alpha NTPase domain AP3564_RS16460 PF14579 Helix-hairpin-helix motif AP3564_RS16460 PF14480 DNA polymerase III polC-type N-terminus I AP3564_RS16460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AP3564_RS16460 PF02811 PHP domain AP3564_RS16460 PF11490 DNA polymerase III polC-type N-terminus II AP3564_RS16460 PF00929 Exonuclease AP3564_RS16465 PF03129 Anticodon binding domain AP3564_RS16465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP3564_RS16465 PF04073 Aminoacyl-tRNA editing domain AP3564_RS16470 PF13180 PDZ domain AP3564_RS16470 PF02163 Peptidase family M50 AP3564_RS16475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AP3564_RS16475 PF13288 DXP reductoisomerase C-terminal domain AP3564_RS16475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AP3564_RS16485 PF01255 Putative undecaprenyl diphosphate synthase AP3564_RS16490 PF01765 Ribosome recycling factor AP3564_RS16495 PF00696 Amino acid kinase family AP3564_RS16500 PF00889 Elongation factor TS AP3564_RS16505 PF00318 Ribosomal protein S2 AP3564_RS16515 PF04545 Sigma-70, region 4 AP3564_RS16515 PF04542 Sigma-70 region 2 AP3564_RS16515 PF04539 Sigma-70 region 3 AP3564_RS16520 PF03975 CheD chemotactic sensory transduction AP3564_RS16525 PF04509 CheC-like family AP3564_RS16530 PF01584 CheW-like domain AP3564_RS16535 PF07194 P2 response regulator binding domain AP3564_RS16535 PF01627 Hpt domain AP3564_RS16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS16535 PF02895 Signal transducing histidine kinase, homodimeric domain AP3564_RS16535 PF01584 CheW-like domain AP3564_RS16540 PF01339 CheB methylesterase AP3564_RS16540 PF00072 Response regulator receiver domain AP3564_RS16545 PF10609 NUBPL iron-transfer P-loop NTPase AP3564_RS16550 PF00448 SRP54-type protein, GTPase domain AP3564_RS16555 PF00771 FHIPEP family AP3564_RS16560 PF01312 FlhB HrpN YscU SpaS Family AP3564_RS16565 PF01311 Bacterial export proteins, family 1 AP3564_RS16570 PF01313 Bacterial export proteins, family 3 AP3564_RS16575 PF00813 FliP family AP3564_RS16580 PF04347 Flagellar biosynthesis protein, FliO AP3564_RS16585 PF00072 Response regulator receiver domain AP3564_RS16590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AP3564_RS16590 PF04509 CheC-like family AP3564_RS16595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AP3564_RS16595 PF02154 Flagellar motor switch protein FliM AP3564_RS16600 PF03748 Flagellar basal body-associated protein FliL AP3564_RS16605 PF06289 Flagellar and Swarming motility proteins AP3564_RS16610 PF00460 Flagella basal body rod protein AP3564_RS16610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AP3564_RS16615 PF03963 Flagellar hook capping protein - N-terminal region AP3564_RS16620 PF02120 Flagellar hook-length control protein FliK AP3564_RS16630 PF02050 Flagellar FliJ protein AP3564_RS16635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AP3564_RS16635 PF02874 ATP synthase alpha/beta family, beta-barrel domain AP3564_RS16635 PF18269 T3SS EscN ATPase C-terminal domain AP3564_RS16640 PF02108 Flagellar assembly protein FliH AP3564_RS16645 PF14841 FliG middle domain AP3564_RS16645 PF01706 FliG C-terminal domain AP3564_RS16645 PF14842 FliG N-terminal domain AP3564_RS16650 PF08345 Flagellar M-ring protein C-terminal AP3564_RS16650 PF01514 Secretory protein of YscJ/FliF family AP3564_RS16655 PF02049 Flagellar hook-basal body complex protein FliE AP3564_RS16660 PF00460 Flagella basal body rod protein AP3564_RS16660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AP3564_RS16665 PF00460 Flagella basal body rod protein AP3564_RS16670 PF06018 CodY GAF-like domain AP3564_RS16670 PF08222 CodY helix-turn-helix domain AP3564_RS16675 PF07724 AAA domain (Cdc48 subfamily) AP3564_RS16675 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS16675 PF10431 C-terminal, D2-small domain, of ClpB protein AP3564_RS16680 PF00227 Proteasome subunit AP3564_RS16685 PF00589 Phage integrase family AP3564_RS16685 PF02899 Phage integrase, N-terminal SAM-like domain AP3564_RS16690 PF01134 Glucose inhibited division protein A AP3564_RS16695 PF01396 Topoisomerase DNA binding C4 zinc finger AP3564_RS16695 PF01131 DNA topoisomerase AP3564_RS16695 PF01751 Toprim domain AP3564_RS16700 PF02481 DNA recombination-mediator protein A AP3564_RS16705 PF00549 CoA-ligase AP3564_RS16705 PF02629 CoA binding domain AP3564_RS16710 PF08442 ATP-grasp domain AP3564_RS16710 PF00549 CoA-ligase AP3564_RS16715 PF01312 FlhB HrpN YscU SpaS Family AP3564_RS16725 PF01351 Ribonuclease HII AP3564_RS16730 PF01926 50S ribosome-binding GTPase AP3564_RS16735 PF10502 Signal peptidase, peptidase S26 AP3564_RS16740 PF01245 Ribosomal protein L19 AP3564_RS16745 PF01746 tRNA (Guanine-1)-methyltransferase AP3564_RS16750 PF01782 RimM N-terminal domain AP3564_RS16750 PF05239 PRC-barrel domain AP3564_RS16755 PF11068 YlqD protein AP3564_RS16770 PF00886 Ribosomal protein S16 AP3564_RS16775 PF00448 SRP54-type protein, GTPase domain AP3564_RS16775 PF02978 Signal peptide binding domain AP3564_RS16775 PF02881 SRP54-type protein, helical bundle domain AP3564_RS16780 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AP3564_RS16785 PF00448 SRP54-type protein, GTPase domain AP3564_RS16785 PF02881 SRP54-type protein, helical bundle domain AP3564_RS16790 PF06470 SMC proteins Flexible Hinge Domain AP3564_RS16790 PF02463 RecF/RecN/SMC N terminal domain AP3564_RS16795 PF14622 Ribonuclease-III-like AP3564_RS16795 PF00035 Double-stranded RNA binding motif AP3564_RS16800 PF00550 Phosphopantetheine attachment site AP3564_RS16810 PF00698 Acyl transferase domain AP3564_RS16815 PF02504 Fatty acid synthesis protein AP3564_RS16820 PF08279 HTH domain AP3564_RS16820 PF01575 MaoC like domain AP3564_RS16825 PF00270 DEAD/DEAH box helicase AP3564_RS16825 PF17191 RecG wedge domain AP3564_RS16825 PF00271 Helicase conserved C-terminal domain AP3564_RS16830 PF13684 Dihydroxyacetone kinase family AP3564_RS16830 PF02734 DAK2 domain AP3564_RS16835 PF03780 Asp23 family, cell envelope-related function AP3564_RS16840 PF00830 Ribosomal L28 family AP3564_RS16845 PF08183 Stage V sporulation protein family AP3564_RS16850 PF00834 Ribulose-phosphate 3 epimerase family AP3564_RS16855 PF16745 RsgA N-terminal domain AP3564_RS16855 PF03193 RsgA GTPase AP3564_RS16860 PF00069 Protein kinase domain AP3564_RS16860 PF03793 PASTA domain AP3564_RS16870 PF04055 Radical SAM superfamily AP3564_RS16875 PF01189 16S rRNA methyltransferase RsmB/F AP3564_RS16875 PF01029 NusB family AP3564_RS16880 PF02911 Formyl transferase, C-terminal domain AP3564_RS16880 PF00551 Formyl transferase AP3564_RS16885 PF04851 Type III restriction enzyme, res subunit AP3564_RS16885 PF00271 Helicase conserved C-terminal domain AP3564_RS16885 PF18074 Primosomal protein N C-terminal domain AP3564_RS16885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AP3564_RS16885 PF17764 3′ DNA-binding domain (3′BD) AP3564_RS16890 PF04127 DNA / pantothenate metabolism flavoprotein AP3564_RS16890 PF02441 Flavoprotein AP3564_RS16895 PF01192 RNA polymerase Rpb6 AP3564_RS16900 PF00625 Guanylate kinase AP3564_RS16905 PF04025 Domain of unknown function (DUF370) AP3564_RS16910 PF03755 YicC-like family, N-terminal region AP3564_RS16910 PF08340 Domain of unknown function (DUF1732) AP3564_RS16915 PF00689 Cation transporting ATPase, C-terminus AP3564_RS16915 PF00690 Cation transporter/ATPase, N-terminus AP3564_RS16920 PF05670 NFACT protein RNA binding domain AP3564_RS16925 PF01903 CbiX AP3564_RS16930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP3564_RS16940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AP3564_RS16940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AP3564_RS16950 PF14306 PUA-like domain AP3564_RS16950 PF01747 ATP-sulfurylase AP3564_RS16955 PF01507 Phosphoadenosine phosphosulfate reductase family AP3564_RS16960 PF00156 Phosphoribosyl transferase domain AP3564_RS16965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AP3564_RS16970 PF01180 Dihydroorotate dehydrogenase AP3564_RS16975 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AP3564_RS16975 PF00970 Oxidoreductase FAD-binding domain AP3564_RS16980 PF02142 MGS-like domain AP3564_RS16980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS16980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AP3564_RS16985 PF00117 Glutamine amidotransferase class-I AP3564_RS16985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AP3564_RS16990 PF01979 Amidohydrolase family AP3564_RS16995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AP3564_RS16995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AP3564_RS17000 PF00860 Permease family AP3564_RS17005 PF00156 Phosphoribosyl transferase domain AP3564_RS17010 PF01479 S4 domain AP3564_RS17010 PF00849 RNA pseudouridylate synthase AP3564_RS17015 PF01252 Signal peptidase (SPase) II AP3564_RS17020 PF01258 Prokaryotic dksA/traR C4-type zinc finger AP3564_RS17025 PF06827 Zinc finger found in FPG and IleRS AP3564_RS17025 PF00133 tRNA synthetases class I (I, L, M and V) AP3564_RS17025 PF08264 Anticodon-binding domain of tRNA AP3564_RS17030 PF05103 DivIVA protein AP3564_RS17035 PF17774 Putative RNA-binding domain in YlmH AP3564_RS17035 PF01479 S4 domain AP3564_RS17040 PF02325 YGGT family AP3564_RS17045 PF04472 Cell division protein SepF AP3564_RS17050 PF01168 Alanine racemase, N-terminal domain AP3564_RS17055 PF02578 Multi-copper polyphenol oxidoreductase laccase AP3564_RS17060 PF05239 PRC-barrel domain AP3564_RS17065 PF04545 Sigma-70, region 4 AP3564_RS17065 PF04539 Sigma-70 region 3 AP3564_RS17065 PF04542 Sigma-70 region 2 AP3564_RS17070 PF04545 Sigma-70, region 4 AP3564_RS17070 PF04542 Sigma-70 region 2 AP3564_RS17075 PF03419 Sporulation factor SpoIIGA AP3564_RS17080 PF12327 FtsZ family, C-terminal domain AP3564_RS17080 PF00091 Tubulin/FtsZ family, GTPase domain AP3564_RS17085 PF02491 SHS2 domain inserted in FTSA AP3564_RS17090 PF06947 Protein of unknown function (DUF1290) AP3564_RS17095 PF05949 Bacterial protein of unknown function (DUF881) AP3564_RS17100 PF05949 Bacterial protein of unknown function (DUF881) AP3564_RS17105 PF08478 POTRA domain, FtsQ-type AP3564_RS17110 PF01565 FAD binding domain AP3564_RS17110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AP3564_RS17115 PF04101 Glycosyltransferase family 28 C-terminal domain AP3564_RS17115 PF03033 Glycosyltransferase family 28 N-terminal domain AP3564_RS17120 PF01098 Cell cycle protein AP3564_RS17125 PF08245 Mur ligase middle domain AP3564_RS17125 PF02875 Mur ligase family, glutamate ligase domain AP3564_RS17130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AP3564_RS17130 PF00953 Glycosyl transferase family 4 AP3564_RS17135 PF08245 Mur ligase middle domain AP3564_RS17135 PF01225 Mur ligase family, catalytic domain AP3564_RS17135 PF02875 Mur ligase family, glutamate ligase domain AP3564_RS17140 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS17140 PF03717 Penicillin-binding Protein dimerisation domain AP3564_RS17140 PF03793 PASTA domain AP3564_RS17145 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS17145 PF03717 Penicillin-binding Protein dimerisation domain AP3564_RS17145 PF03793 PASTA domain AP3564_RS17155 PF01795 MraW methylase family AP3564_RS17160 PF02381 MraZ protein, putative antitoxin-like AP3564_RS17165 PF10079 Bacillithiol biosynthesis BshC AP3564_RS17175 PF02558 Ketopantoate reductase PanE/ApbA AP3564_RS17175 PF08546 Ketopantoate reductase PanE/ApbA C terminal AP3564_RS17180 PF00583 Acetyltransferase (GNAT) family AP3564_RS17195 PF01783 Ribosomal L32p protein family AP3564_RS17200 PF02620 Large ribosomal RNA subunit accumulation protein YceD AP3564_RS17205 PF05636 HIGH Nucleotidyl Transferase AP3564_RS17210 PF13180 PDZ domain AP3564_RS17210 PF05362 Lon protease (S16) C-terminal proteolytic domain AP3564_RS17215 PF01734 Patatin-like phospholipase AP3564_RS17220 PF07670 Nucleoside recognition AP3564_RS17225 PF01467 Cytidylyltransferase-like AP3564_RS17245 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AP3564_RS17250 PF06133 Control of competence regulator ComK, YlbF/YmcA AP3564_RS17265 PF14003 YlbE-like protein AP3564_RS17270 PF14071 Putative coat protein AP3564_RS17275 PF14504 CAP-associated N-terminal AP3564_RS17275 PF00188 Cysteine-rich secretory protein family AP3564_RS17280 PF00571 CBS domain AP3564_RS17285 PF08868 YugN-like family AP3564_RS17290 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AP3564_RS17300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AP3564_RS17305 PF00510 Cytochrome c oxidase subunit III AP3564_RS17310 PF00115 Cytochrome C and Quinol oxidase polypeptide I AP3564_RS17315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AP3564_RS17315 PF00034 Cytochrome c AP3564_RS17315 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AP3564_RS17320 PF01040 UbiA prenyltransferase family AP3564_RS17325 PF02628 Cytochrome oxidase assembly protein AP3564_RS17330 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AP3564_RS17335 PF13307 Helicase C-terminal domain AP3564_RS17340 PF02926 THUMP domain AP3564_RS17340 PF01170 Putative RNA methylase family UPF0020 AP3564_RS17350 PF05103 DivIVA protein AP3564_RS17355 PF11122 Inner spore coat protein D AP3564_RS17360 PF13482 RNase_H superfamily AP3564_RS17365 PF00271 Helicase conserved C-terminal domain AP3564_RS17365 PF00270 DEAD/DEAH box helicase AP3564_RS17365 PF09369 Domain of unknown function (DUF1998) AP3564_RS17375 PF14179 YppG-like protein AP3564_RS17395 PF10720 Protein of unknown function (DUF2515) AP3564_RS17400 PF03838 Recombination protein U AP3564_RS17405 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS17405 PF00912 Transglycosylase AP3564_RS17415 PF00730 HhH-GPD superfamily base excision DNA repair protein AP3564_RS17415 PF10576 Iron-sulfur binding domain of endonuclease III AP3564_RS17415 PF00633 Helix-hairpin-helix motif AP3564_RS17420 PF07261 Replication initiation and membrane attachment AP3564_RS17425 PF00152 tRNA synthetases class II (D, K and N) AP3564_RS17425 PF01336 OB-fold nucleic acid binding domain AP3564_RS17430 PF00155 Aminotransferase class I and II AP3564_RS17440 PF14084 Protein of unknown function (DUF4264) AP3564_RS17450 PF02261 Aspartate decarboxylase AP3564_RS17455 PF02569 Pantoate-beta-alanine ligase AP3564_RS17460 PF02548 Ketopantoate hydroxymethyltransferase AP3564_RS17465 PF02237 Biotin protein ligase C terminal domain AP3564_RS17465 PF08279 HTH domain AP3564_RS17465 PF03099 Biotin/lipoate A/B protein ligase family AP3564_RS17470 PF13735 tRNA nucleotidyltransferase domain 2 putative AP3564_RS17470 PF12627 Probable RNA and SrmB- binding site of polymerase A AP3564_RS17470 PF01743 Poly A polymerase head domain AP3564_RS17475 PF00534 Glycosyl transferases group 1 AP3564_RS17475 PF13439 Glycosyltransferase Family 4 AP3564_RS17480 PF02142 MGS-like domain AP3564_RS17485 PF05173 Dihydrodipicolinate reductase, C-terminus AP3564_RS17485 PF01113 Dihydrodipicolinate reductase, N-terminus AP3564_RS17490 PF03819 MazG nucleotide pyrophosphohydrolase domain AP3564_RS17495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AP3564_RS17495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AP3564_RS17500 PF09577 Sporulation protein YpjB (SpoYpjB) AP3564_RS17505 PF07187 Protein of unknown function (DUF1405) AP3564_RS17520 PF01235 Sodium:alanine symporter family AP3564_RS17525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP3564_RS17525 PF00032 Cytochrome b(C-terminal)/b6/petD AP3564_RS17530 PF00033 Cytochrome b/b6/petB AP3564_RS17535 PF00355 Rieske [2Fe-2S] domain AP3564_RS17540 PF10673 Protein of unknown function (DUF2487) AP3564_RS17555 PF08864 UPF0302 domain AP3564_RS17555 PF08858 IDEAL domain AP3564_RS17570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AP3564_RS17575 PF02153 Prephenate dehydrogenase AP3564_RS17575 PF01842 ACT domain AP3564_RS17580 PF00155 Aminotransferase class I and II AP3564_RS17585 PF00290 Tryptophan synthase alpha chain AP3564_RS17590 PF00291 Pyridoxal-phosphate dependent enzyme AP3564_RS17595 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AP3564_RS17600 PF00218 Indole-3-glycerol phosphate synthase AP3564_RS17605 PF02885 Glycosyl transferase family, helical bundle domain AP3564_RS17605 PF00591 Glycosyl transferase family, a/b domain AP3564_RS17610 PF00425 chorismate binding enzyme AP3564_RS17610 PF04715 Anthranilate synthase component I, N terminal region AP3564_RS17615 PF07736 Chorismate mutase type I AP3564_RS17620 PF01761 3-dehydroquinate synthase AP3564_RS17625 PF01264 Chorismate synthase AP3564_RS17630 PF03705 CheR methyltransferase, all-alpha domain AP3564_RS17630 PF01739 CheR methyltransferase, SAM binding domain AP3564_RS17635 PF00334 Nucleoside diphosphate kinase AP3564_RS17640 PF00348 Polyprenyl synthetase AP3564_RS17645 PF01209 ubiE/COQ5 methyltransferase family AP3564_RS17650 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AP3564_RS17655 PF02081 Tryptophan RNA-binding attenuator protein AP3564_RS17660 PF01227 GTP cyclohydrolase I AP3564_RS17665 PF00216 Bacterial DNA-binding protein AP3564_RS17675 PF08757 CotH kinase protein AP3564_RS17680 PF09547 Stage IV sporulation protein A (spore_IV_A) AP3564_RS17690 PF10966 Protein of unknown function (DUF2768) AP3564_RS17695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AP3564_RS17695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AP3564_RS17700 PF01926 50S ribosome-binding GTPase AP3564_RS17700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AP3564_RS17710 PF14045 YIEGIA protein AP3564_RS17720 PF00575 S1 RNA binding domain AP3564_RS17725 PF01553 Acyltransferase AP3564_RS17730 PF02224 Cytidylate kinase AP3564_RS17740 PF07238 PilZ domain AP3564_RS17740 PF12945 Flagellar protein YcgR AP3564_RS17745 PF14620 YpeB sporulation AP3564_RS17745 PF03413 Peptidase propeptide and YPEB domain AP3564_RS17750 PF07486 Cell Wall Hydrolase AP3564_RS17750 PF01471 Putative peptidoglycan binding domain AP3564_RS17755 PF13367 PrsW family intramembrane metalloprotease AP3564_RS17760 PF17763 Glutaminase/Asparaginase C-terminal domain AP3564_RS17760 PF00710 Asparaginase, N-terminal AP3564_RS17770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP3564_RS17770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AP3564_RS17775 PF05389 Negative regulator of genetic competence (MecA) AP3564_RS17780 PF10864 Protein of unknown function (DUF2663) AP3564_RS17785 PF01476 LysM domain AP3564_RS17790 PF02517 CPBP intramembrane metalloprotease AP3564_RS17795 PF00271 Helicase conserved C-terminal domain AP3564_RS17795 PF00270 DEAD/DEAH box helicase AP3564_RS17800 PF14493 Helix-turn-helix domain AP3564_RS17810 PF12822 ECF transporter, substrate-specific component AP3564_RS17815 PF00719 Inorganic pyrophosphatase AP3564_RS17820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP3564_RS17820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP3564_RS17820 PF01842 ACT domain AP3564_RS17830 PF04542 Sigma-70 region 2 AP3564_RS17830 PF08281 Sigma-70, region 4 AP3564_RS17835 PF01923 Cobalamin adenosyltransferase AP3564_RS17840 PF00672 HAMP domain AP3564_RS17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS17840 PF18698 Histidine kinase sensor domain AP3564_RS17840 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS17840 PF00989 PAS fold AP3564_RS17845 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS17845 PF00072 Response regulator receiver domain AP3564_RS17850 PF01578 Cytochrome C assembly protein AP3564_RS17855 PF05140 ResB-like family AP3564_RS17860 PF00578 AhpC/TSA family AP3564_RS17865 PF00849 RNA pseudouridylate synthase AP3564_RS17865 PF01479 S4 domain AP3564_RS17870 PF07670 Nucleoside recognition AP3564_RS17875 PF07670 Nucleoside recognition AP3564_RS17880 PF00768 D-alanyl-D-alanine carboxypeptidase AP3564_RS17880 PF07943 Penicillin-binding protein 5, C-terminal domain AP3564_RS17885 PF04079 Segregation and condensation complex subunit ScpB AP3564_RS17890 PF02616 Segregation and condensation protein ScpA AP3564_RS17895 PF03745 Domain of unknown function (DUF309) AP3564_RS17900 PF00583 Acetyltransferase (GNAT) family AP3564_RS17905 PF00885 6,7-dimethyl-8-ribityllumazine synthase AP3564_RS17910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AP3564_RS17910 PF00925 GTP cyclohydrolase II AP3564_RS17915 PF00677 Lumazine binding domain AP3564_RS17920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AP3564_RS17920 PF01872 RibD C-terminal domain AP3564_RS17930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AP3564_RS17935 PF06207 Protein of unknown function (DUF1002) AP3564_RS17940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AP3564_RS17940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AP3564_RS17945 PF03323 Bacillus/Clostridium GerA spore germination protein AP3564_RS17950 PF07451 Stage V sporulation protein AD (SpoVAD) AP3564_RS17955 PF13782 Stage V sporulation protein AB AP3564_RS17960 PF12164 Stage V sporulation protein AA AP3564_RS17970 PF04539 Sigma-70 region 3 AP3564_RS17970 PF04545 Sigma-70, region 4 AP3564_RS17970 PF04542 Sigma-70 region 2 AP3564_RS17975 PF13581 Histidine kinase-like ATPase domain AP3564_RS17980 PF01740 STAS domain AP3564_RS17985 PF00768 D-alanyl-D-alanine carboxypeptidase AP3564_RS17985 PF07943 Penicillin-binding protein 5, C-terminal domain AP3564_RS17990 PF00591 Glycosyl transferase family, a/b domain AP3564_RS17990 PF02885 Glycosyl transferase family, helical bundle domain AP3564_RS17990 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AP3564_RS17995 PF01048 Phosphorylase superfamily AP3564_RS18000 PF01676 Metalloenzyme superfamily AP3564_RS18005 PF02899 Phage integrase, N-terminal SAM-like domain AP3564_RS18005 PF00589 Phage integrase family AP3564_RS18010 PF14004 Protein of unknown function (DUF4227) AP3564_RS18015 PF01475 Ferric uptake regulator family AP3564_RS18020 PF01944 Stage II sporulation protein M AP3564_RS18030 PF00293 NUDIX domain AP3564_RS18040 PF00248 Aldo/keto reductase family AP3564_RS18045 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS18050 PF01040 UbiA prenyltransferase family AP3564_RS18065 PF10827 Protein of unknown function (DUF2552) AP3564_RS18070 PF01521 Iron-sulphur cluster biosynthesis AP3564_RS18075 PF01209 ubiE/COQ5 methyltransferase family AP3564_RS18085 PF08863 YolD-like protein AP3564_RS18090 PF11799 impB/mucB/samB family C-terminal domain AP3564_RS18090 PF00817 impB/mucB/samB family AP3564_RS18090 PF11798 IMS family HHH motif AP3564_RS18100 PF00106 short chain dehydrogenase AP3564_RS18105 PF00753 Metallo-beta-lactamase superfamily AP3564_RS18110 PF14748 Pyrroline-5-carboxylate reductase dimerisation AP3564_RS18110 PF03807 NADP oxidoreductase coenzyme F420-dependent AP3564_RS18115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AP3564_RS18125 PF00753 Metallo-beta-lactamase superfamily AP3564_RS18125 PF12706 Beta-lactamase superfamily domain AP3564_RS18130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AP3564_RS18130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AP3564_RS18135 PF00708 Acylphosphatase AP3564_RS18140 PF02653 Branched-chain amino acid transport system / permease component AP3564_RS18145 PF00005 ABC transporter AP3564_RS18170 PF00005 ABC transporter AP3564_RS18185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AP3564_RS18185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP3564_RS18190 PF11799 impB/mucB/samB family C-terminal domain AP3564_RS18190 PF00817 impB/mucB/samB family AP3564_RS18190 PF11798 IMS family HHH motif AP3564_RS18195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS18195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AP3564_RS18200 PF01493 GXGXG motif AP3564_RS18200 PF00310 Glutamine amidotransferases class-II AP3564_RS18200 PF01645 Conserved region in glutamate synthase AP3564_RS18200 PF04898 Glutamate synthase central domain AP3564_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP3564_RS18205 PF03466 LysR substrate binding domain AP3564_RS18210 PF01546 Peptidase family M20/M25/M40 AP3564_RS18210 PF07687 Peptidase dimerisation domain AP3564_RS18215 PF11728 Putative aromatic acid exporter C-terminal domain AP3564_RS18215 PF06081 Aromatic acid exporter family member 1 AP3564_RS18220 PF06491 Disulphide isomerase AP3564_RS18225 PF00364 Biotin-requiring enzyme AP3564_RS18225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP3564_RS18225 PF02817 e3 binding domain AP3564_RS18230 PF02779 Transketolase, pyrimidine binding domain AP3564_RS18230 PF02780 Transketolase, C-terminal domain AP3564_RS18235 PF00676 Dehydrogenase E1 component AP3564_RS18240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP3564_RS18240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP3564_RS18245 PF11118 Protein of unknown function (DUF2627) AP3564_RS18250 PF00072 Response regulator receiver domain AP3564_RS18250 PF08769 Sporulation initiation factor Spo0A C terminal AP3564_RS18255 PF17820 PDZ domain AP3564_RS18255 PF05580 SpoIVB peptidase S55 AP3564_RS18260 PF13476 AAA domain AP3564_RS18265 PF01316 Arginine repressor, DNA binding domain AP3564_RS18265 PF02863 Arginine repressor, C-terminal domain AP3564_RS18270 PF01479 S4 domain AP3564_RS18270 PF01728 FtsJ-like methyltransferase AP3564_RS18275 PF02779 Transketolase, pyrimidine binding domain AP3564_RS18275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AP3564_RS18275 PF02780 Transketolase, C-terminal domain AP3564_RS18285 PF00348 Polyprenyl synthetase AP3564_RS18290 PF02609 Exonuclease VII small subunit AP3564_RS18295 PF13742 OB-fold nucleic acid binding domain AP3564_RS18295 PF02601 Exonuclease VII, large subunit AP3564_RS18300 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AP3564_RS18300 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AP3564_RS18305 PF01029 NusB family AP3564_RS18310 PF03780 Asp23 family, cell envelope-related function AP3564_RS18315 PF00289 Biotin carboxylase, N-terminal domain AP3564_RS18315 PF02785 Biotin carboxylase C-terminal domain AP3564_RS18315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP3564_RS18320 PF00364 Biotin-requiring enzyme AP3564_RS18325 PF12685 SpoIIIAH-like protein AP3564_RS18335 PF09581 Stage III sporulation protein AF (Spore_III_AF) AP3564_RS18340 PF09546 Stage III sporulation protein AE (spore_III_AE) AP3564_RS18345 PF06686 Stage III sporulation protein AC/AD protein family AP3564_RS18350 PF06686 Stage III sporulation protein AC/AD protein family AP3564_RS18355 PF09548 Stage III sporulation protein AB (spore_III_AB) AP3564_RS18365 PF01132 Elongation factor P (EF-P) OB domain AP3564_RS18365 PF09285 Elongation factor P, C-terminal AP3564_RS18365 PF08207 Elongation factor P (EF-P) KOW-like domain AP3564_RS18370 PF01321 Creatinase/Prolidase N-terminal domain AP3564_RS18370 PF00557 Metallopeptidase family M24 AP3564_RS18375 PF01220 Dehydroquinase class II AP3564_RS18380 PF11085 Conserved membrane protein YqhR AP3564_RS18385 PF07136 Protein of unknown function (DUF1385) AP3564_RS18395 PF01734 Patatin-like phospholipase AP3564_RS18400 PF01609 Transposase DDE domain AP3564_RS18420 PF07883 Cupin domain AP3564_RS18445 PF13401 AAA domain AP3564_RS18445 PF11426 Tn7 transposition regulator TnsC AP3564_RS18450 PF00665 Integrase core domain AP3564_RS18460 PF00317 Ribonucleotide reductase, all-alpha domain AP3564_RS18460 PF03477 ATP cone domain AP3564_RS18460 PF02867 Ribonucleotide reductase, barrel domain AP3564_RS18465 PF03099 Biotin/lipoate A/B protein ligase family AP3564_RS18470 PF00581 Rhodanese-like domain AP3564_RS18475 PF02347 Glycine cleavage system P-protein AP3564_RS18480 PF02347 Glycine cleavage system P-protein AP3564_RS18485 PF01571 Aminomethyltransferase folate-binding domain AP3564_RS18485 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP3564_RS18490 PF00271 Helicase conserved C-terminal domain AP3564_RS18490 PF00176 SNF2 family N-terminal domain AP3564_RS18495 PF11079 Bacterial protein YqhG of unknown function AP3564_RS18500 PF14038 YqzE-like protein AP3564_RS18525 PF07963 Prokaryotic N-terminal methylation motif AP3564_RS18530 PF00482 Type II secretion system (T2SS), protein F AP3564_RS18535 PF00437 Type II/IV secretion system protein AP3564_RS18550 PF11117 Protein of unknown function (DUF2626) AP3564_RS18555 PF00753 Metallo-beta-lactamase superfamily AP3564_RS18570 PF01476 LysM domain AP3564_RS18570 PF00246 Zinc carboxypeptidase AP3564_RS18575 PF00884 Sulfatase AP3564_RS18580 PF00480 ROK family AP3564_RS18585 PF06014 Bacterial protein of unknown function (DUF910) AP3564_RS18590 PF01694 Rhomboid family AP3564_RS18600 PF01812 5-formyltetrahydrofolate cyclo-ligase family AP3564_RS18605 PF00471 Ribosomal protein L33 AP3564_RS18620 PF01895 PhoU domain AP3564_RS18625 PF00005 ABC transporter AP3564_RS18630 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS18635 PF00528 Binding-protein-dependent transport system inner membrane component AP3564_RS18640 PF12849 PBP superfamily domain AP3564_RS18645 PF07690 Major Facilitator Superfamily AP3564_RS18650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AP3564_RS18650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AP3564_RS18660 PF04306 Protein of unknown function (DUF456) AP3564_RS18665 PF02690 Na+/Pi-cotransporter AP3564_RS18670 PF06691 Protein of unknown function (DUF1189) AP3564_RS18675 PF02743 Cache domain AP3564_RS18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP3564_RS18675 PF00672 HAMP domain AP3564_RS18680 PF07690 Major Facilitator Superfamily AP3564_RS18690 PF04551 GcpE protein AP3564_RS18705 PF01475 Ferric uptake regulator family AP3564_RS18710 PF00950 ABC 3 transport family AP3564_RS18715 PF00005 ABC transporter AP3564_RS18720 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AP3564_RS18720 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AP3564_RS18725 PF11116 Protein of unknown function (DUF2624) AP3564_RS18730 PF01261 Xylose isomerase-like TIM barrel AP3564_RS18735 PF00271 Helicase conserved C-terminal domain AP3564_RS18735 PF00270 DEAD/DEAH box helicase AP3564_RS18745 PF02401 LytB protein AP3564_RS18750 PF01784 NIF3 (NGG1p interacting factor 3) AP3564_RS18755 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AP3564_RS18760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP3564_RS18765 PF04542 Sigma-70 region 2 AP3564_RS18765 PF00140 Sigma-70 factor, region 1.2 AP3564_RS18765 PF03979 Sigma-70 factor, region 1.1 AP3564_RS18765 PF04545 Sigma-70, region 4 AP3564_RS18765 PF04539 Sigma-70 region 3 AP3564_RS18770 PF08275 DNA primase catalytic core, N-terminal domain AP3564_RS18770 PF01807 CHC2 zinc finger AP3564_RS18770 PF10410 DnaB-helicase binding domain of primase AP3564_RS18775 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AP3564_RS18780 PF03618 Kinase/pyrophosphorylase AP3564_RS18785 PF08279 HTH domain AP3564_RS18785 PF00571 CBS domain AP3564_RS18790 PF02092 Glycyl-tRNA synthetase beta subunit AP3564_RS18795 PF02091 Glycyl-tRNA synthetase alpha subunit AP3564_RS18800 PF02565 Recombination protein O C terminal AP3564_RS18800 PF11967 Recombination protein O N terminal AP3564_RS18805 PF14006 YqzL-like protein AP3564_RS18810 PF07650 KH domain AP3564_RS18810 PF01926 50S ribosome-binding GTPase AP3564_RS18815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AP3564_RS18820 PF01219 Prokaryotic diacylglycerol kinase AP3564_RS18825 PF02130 Uncharacterized protein family UPF0054 AP3564_RS18830 PF01966 HD domain AP3564_RS18830 PF07697 7TM-HD extracellular AP3564_RS18830 PF07698 7TM receptor with intracellular HD hydrolase AP3564_RS18835 PF02562 PhoH-like protein AP3564_RS18840 PF06898 Putative stage IV sporulation protein YqfD AP3564_RS18845 PF07873 YabP family AP3564_RS18855 PF12127 SigmaW regulon antibacterial AP3564_RS18860 PF01957 NfeD-like C-terminal, partner-binding AP3564_RS18860 PF01972 Serine dehydrogenase proteinase AP3564_RS18865 PF13667 ThiC-associated domain AP3564_RS18865 PF01964 Radical SAM ThiC family AP3564_RS18870 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AP3564_RS18880 PF09424 Yqey-like protein AP3564_RS18885 PF01165 Ribosomal protein S21 AP3564_RS18890 PF02690 Na+/Pi-cotransporter AP3564_RS18895 PF01791 DeoC/LacD family aldolase AP3564_RS18900 PF00919 Uncharacterized protein family UPF0004 AP3564_RS18900 PF04055 Radical SAM superfamily AP3564_RS18900 PF01938 TRAM domain AP3564_RS18905 PF04452 RNA methyltransferase AP3564_RS18915 PF00684 DnaJ central domain AP3564_RS18915 PF00226 DnaJ domain AP3564_RS18915 PF01556 DnaJ C terminal domain AP3564_RS18920 PF00012 Hsp70 protein AP3564_RS18925 PF01025 GrpE AP3564_RS18930 PF01628 HrcA protein C terminal domain AP3564_RS18935 PF06969 HemN C-terminal domain AP3564_RS18935 PF04055 Radical SAM superfamily AP3564_RS18940 PF03144 Elongation factor Tu domain 2 AP3564_RS18940 PF06421 GTP-binding protein LepA C-terminus AP3564_RS18940 PF00009 Elongation factor Tu GTP binding domain AP3564_RS18940 PF00679 Elongation factor G C-terminus AP3564_RS18950 PF07454 Stage II sporulation protein P (SpoIIP) AP3564_RS18955 PF03418 Germination protease AP3564_RS18960 PF01649 Ribosomal protein S20 AP3564_RS18965 PF06144 DNA polymerase III, delta subunit AP3564_RS18970 PF14141 YqzM-like protein AP3564_RS18975 PF03772 Competence protein AP3564_RS18975 PF00753 Metallo-beta-lactamase superfamily AP3564_RS18975 PF13567 Domain of unknown function (DUF4131) AP3564_RS18980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AP3564_RS18985 PF10531 SLBB domain AP3564_RS18990 PF03807 NADP oxidoreductase coenzyme F420-dependent AP3564_RS18990 PF14748 Pyrroline-5-carboxylate reductase dimerisation AP3564_RS18995 PF13649 Methyltransferase domain AP3564_RS19005 PF01966 HD domain AP3564_RS19010 PF01467 Cytidylyltransferase-like AP3564_RS19015 PF01985 CRS1 / YhbY (CRM) domain AP3564_RS19020 PF08501 Shikimate dehydrogenase substrate binding domain AP3564_RS19020 PF01488 Shikimate / quinate 5-dehydrogenase AP3564_RS19020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AP3564_RS19025 PF01926 50S ribosome-binding GTPase AP3564_RS19035 PF08970 Sporulation inhibitor A AP3564_RS19040 PF04542 Sigma-70 region 2 AP3564_RS19040 PF04545 Sigma-70, region 4 AP3564_RS19050 PF01048 Phosphorylase superfamily AP3564_RS19055 PF07423 Domain of unknown function (DUF1510) AP3564_RS19060 PF00905 Penicillin binding protein transpeptidase domain AP3564_RS19060 PF03717 Penicillin-binding Protein dimerisation domain AP3564_RS19065 PF03449 Transcription elongation factor, N-terminal AP3564_RS19065 PF01272 Transcription elongation factor, GreA/GreB, C-term AP3564_RS19070 PF16325 Peptidase family U32 C-terminal domain AP3564_RS19070 PF01136 Peptidase family U32 AP3564_RS19075 PF01136 Peptidase family U32 AP3564_RS19080 PF01596 O-methyltransferase AP3564_RS19085 PF02618 YceG-like family AP3564_RS19090 PF06949 Protein of unknown function (DUF1292) AP3564_RS19095 PF03652 Holliday junction resolvase AP3564_RS19100 PF06135 IreB regulatory phosphoprotein AP3564_RS19105 PF02272 DHHA1 domain AP3564_RS19105 PF01411 tRNA synthetases class II (A) AP3564_RS19105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_RS19110 PF01594 AI-2E family transporter AP3564_RS19120 PF13538 UvrD-like helicase C-terminal domain AP3564_RS19120 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AP3564_RS19120 PF14490 Helix-hairpin-helix containing domain AP3564_RS19135 PF00266 Aminotransferase class-V AP3564_RS19140 PF02082 Transcriptional regulator AP3564_RS19145 PF12002 MgsA AAA+ ATPase C terminal AP3564_RS19145 PF16193 AAA C-terminal domain AP3564_RS19145 PF05496 Holliday junction DNA helicase RuvB P-loop domain AP3564_RS19150 PF00899 ThiF family AP3564_RS19160 PF01336 OB-fold nucleic acid binding domain AP3564_RS19160 PF02938 GAD domain AP3564_RS19160 PF00152 tRNA synthetases class II (D, K and N) AP3564_RS19165 PF03129 Anticodon binding domain AP3564_RS19165 PF13393 Histidyl-tRNA synthetase AP3564_RS19170 PF01520 N-acetylmuramoyl-L-alanine amidase AP3564_RS19170 PF08239 Bacterial SH3 domain AP3564_RS19175 PF02580 D-Tyr-tRNA(Tyr) deacylase AP3564_RS19180 PF02824 TGS domain AP3564_RS19180 PF04607 Region found in RelA / SpoT proteins AP3564_RS19180 PF13291 ACT domain AP3564_RS19185 PF00156 Phosphoribosyl transferase domain AP3564_RS19190 PF01368 DHH family AP3564_RS19190 PF02272 DHHA1 domain AP3564_RS19190 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AP3564_RS19190 PF17768 RecJ OB domain AP3564_RS19195 PF02355 Protein export membrane protein AP3564_RS19195 PF07549 SecD/SecF GG Motif AP3564_RS19200 PF13797 Post-transcriptional regulator AP3564_RS19205 PF14667 Polysaccharide biosynthesis C-terminal domain AP3564_RS19205 PF01943 Polysaccharide biosynthesis protein AP3564_RS19210 PF12670 Protein of unknown function (DUF3792) AP3564_RS19215 PF02699 Preprotein translocase subunit AP3564_RS19220 PF01702 Queuine tRNA-ribosyltransferase AP3564_RS19225 PF02547 Queuosine biosynthesis protein AP3564_RS19230 PF11146 Protein of unknown function (DUF2905) AP3564_RS19235 PF17864 RuvB AAA lid domain AP3564_RS19235 PF05491 RuvB C-terminal winged helix domain AP3564_RS19235 PF05496 Holliday junction DNA helicase RuvB P-loop domain AP3564_RS19240 PF07499 RuvA, C-terminal domain AP3564_RS19240 PF01330 RuvA N terminal domain AP3564_RS19245 PF08977 Bypass of Forespore C, N terminal AP3564_RS19245 PF08955 BofC C-terminal domain AP3564_RS19250 PF01709 Transcriptional regulator AP3564_RS19255 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AP3564_RS19260 PF02540 NAD synthase AP3564_RS19265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS19270 PF01476 LysM domain AP3564_RS19275 PF02445 Quinolinate synthetase A protein AP3564_RS19280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AP3564_RS19280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AP3564_RS19290 PF00890 FAD binding domain AP3564_RS19290 PF02910 Fumarate reductase flavoprotein C-term AP3564_RS19295 PF00266 Aminotransferase class-V AP3564_RS19300 PF08279 HTH domain AP3564_RS19300 PF02829 3H domain AP3564_RS19305 PF00800 Prephenate dehydratase AP3564_RS19305 PF01842 ACT domain AP3564_RS19310 PF01842 ACT domain AP3564_RS19315 PF09269 Domain of unknown function (DUF1967) AP3564_RS19315 PF01018 GTP1/OBG AP3564_RS19315 PF01926 50S ribosome-binding GTPase AP3564_RS19320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AP3564_RS19320 PF14682 Sporulation initiation phospho-transferase B, C-terminal AP3564_RS19325 PF01016 Ribosomal L27 protein AP3564_RS19330 PF04327 Cysteine protease Prp AP3564_RS19335 PF00829 Ribosomal prokaryotic L21 protein AP3564_RS19340 PF10150 Ribonuclease E/G family AP3564_RS19340 PF00575 S1 RNA binding domain AP3564_RS19345 PF02163 Peptidase family M50 AP3564_RS19350 PF01551 Peptidase family M23 AP3564_RS19355 PF01566 Natural resistance-associated macrophage protein AP3564_RS19360 PF00881 Nitroreductase family AP3564_RS19370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AP3564_RS19375 PF03775 Septum formation inhibitor MinC, C-terminal domain AP3564_RS19380 PF04093 rod shape-determining protein MreD AP3564_RS19385 PF04085 rod shape-determining protein MreC AP3564_RS19395 PF04002 RadC-like JAB domain AP3564_RS19400 PF02545 Maf-like protein AP3564_RS19410 PF08245 Mur ligase middle domain AP3564_RS19410 PF02875 Mur ligase family, glutamate ligase domain AP3564_RS19415 PF00133 tRNA synthetases class I (I, L, M and V) AP3564_RS19415 PF10458 Valyl tRNA synthetase tRNA binding arm AP3564_RS19415 PF08264 Anticodon-binding domain of tRNA AP3564_RS19430 PF01476 LysM domain AP3564_RS19435 PF00202 Aminotransferase class-III AP3564_RS19440 PF00490 Delta-aminolevulinic acid dehydratase AP3564_RS19445 PF02602 Uroporphyrinogen-III synthase HemD AP3564_RS19450 PF03900 Porphobilinogen deaminase, C-terminal domain AP3564_RS19450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AP3564_RS19455 PF01578 Cytochrome C assembly protein AP3564_RS19460 PF01488 Shikimate / quinate 5-dehydrogenase AP3564_RS19460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AP3564_RS19460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AP3564_RS19470 PF01926 50S ribosome-binding GTPase AP3564_RS19475 PF02190 ATP-dependent protease La (LON) substrate-binding domain AP3564_RS19475 PF05362 Lon protease (S16) C-terminal proteolytic domain AP3564_RS19475 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS19480 PF00004 ATPase family associated with various cellular activities (AAA) AP3564_RS19480 PF05362 Lon protease (S16) C-terminal proteolytic domain AP3564_RS19485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS19500 PF06689 ClpX C4-type zinc finger AP3564_RS19500 PF10431 C-terminal, D2-small domain, of ClpB protein AP3564_RS19500 PF07724 AAA domain (Cdc48 subfamily) AP3564_RS19505 PF05697 Bacterial trigger factor protein (TF) AP3564_RS19505 PF05698 Bacterial trigger factor protein (TF) C-terminus AP3564_RS19505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AP3564_RS19515 PF00694 Aconitase C-terminal domain AP3564_RS19520 PF00330 Aconitase family (aconitate hydratase) AP3564_RS19525 PF00180 Isocitrate/isopropylmalate dehydrogenase AP3564_RS19530 PF00682 HMGL-like AP3564_RS19530 PF08502 LeuA allosteric (dimerisation) domain AP3564_RS19535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AP3564_RS19535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AP3564_RS19540 PF01842 ACT domain AP3564_RS19540 PF10369 Small subunit of acetolactate synthase AP3564_RS19545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP3564_RS19545 PF00205 Thiamine pyrophosphate enzyme, central domain AP3564_RS19545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP3564_RS19550 PF04237 YjbR AP3564_RS19560 PF12850 Calcineurin-like phosphoesterase superfamily domain AP3564_RS19565 PF01725 Ham1 family AP3564_RS19570 PF03725 3' exoribonuclease family, domain 2 AP3564_RS19570 PF01138 3' exoribonuclease family, domain 1 AP3564_RS19575 PF10646 Sporulation and spore germination AP3564_RS19580 PF01177 Asp/Glu/Hydantoin racemase AP3564_RS19585 PF01047 MarR family AP3564_RS19590 PF00196 Bacterial regulatory proteins, luxR family AP3564_RS19595 PF13085 2Fe-2S iron-sulfur cluster binding domain AP3564_RS19595 PF13183 4Fe-4S dicluster domain AP3564_RS19600 PF00890 FAD binding domain AP3564_RS19600 PF02910 Fumarate reductase flavoprotein C-term AP3564_RS19605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AP3564_RS19610 PF10702 Protein of unknown function (DUF2507) AP3564_RS19615 PF08459 UvrC Helix-hairpin-helix N-terminal AP3564_RS19615 PF02151 UvrB/uvrC motif AP3564_RS19615 PF01541 GIY-YIG catalytic domain AP3564_RS19620 PF00085 Thioredoxin AP3564_RS19625 PF01012 Electron transfer flavoprotein domain AP3564_RS19625 PF00766 Electron transfer flavoprotein FAD-binding domain AP3564_RS19630 PF01012 Electron transfer flavoprotein domain AP3564_RS19635 PF08359 YsiA-like protein, C-terminal region AP3564_RS19635 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS19640 PF13193 AMP-binding enzyme C-terminal domain AP3564_RS19640 PF00501 AMP-binding enzyme AP3564_RS19650 PF03994 Domain of Unknown Function (DUF350) AP3564_RS19655 PF00488 MutS domain V AP3564_RS19655 PF01713 Smr domain AP3564_RS19670 PF02674 Colicin V production protein AP3564_RS19675 PF05164 Cell division protein ZapA AP3564_RS19680 PF01351 Ribonuclease HII AP3564_RS19680 PF11858 Domain of unknown function (DUF3378) AP3564_RS19685 PF03147 Ferredoxin-fold anticodon binding domain AP3564_RS19685 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AP3564_RS19685 PF03484 tRNA synthetase B5 domain AP3564_RS19685 PF03483 B3/4 domain AP3564_RS19685 PF01588 Putative tRNA binding domain AP3564_RS19690 PF01409 tRNA synthetases class II core domain (F) AP3564_RS19690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AP3564_RS19700 PF00588 SpoU rRNA Methylase family AP3564_RS19700 PF08032 RNA 2'-O ribose methyltransferase substrate binding AP3564_RS19705 PF14098 Small, acid-soluble spore protein I AP3564_RS19710 PF05343 M42 glutamyl aminopeptidase AP3564_RS19725 PF00453 Ribosomal protein L20 AP3564_RS19730 PF01632 Ribosomal protein L35 AP3564_RS19735 PF05198 Translation initiation factor IF-3, N-terminal domain AP3564_RS19735 PF00707 Translation initiation factor IF-3, C-terminal domain AP3564_RS19740 PF08141 Small acid-soluble spore protein H family AP3564_RS19745 PF03630 Fumble AP3564_RS19750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP3564_RS19765 PF03129 Anticodon binding domain AP3564_RS19765 PF02824 TGS domain AP3564_RS19765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP3564_RS19765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_RS19775 PF08812 YtxC-like family AP3564_RS19780 PF01695 IstB-like ATP binding protein AP3564_RS19780 PF07319 Primosomal protein DnaI N-terminus AP3564_RS19785 PF07261 Replication initiation and membrane attachment AP3564_RS19790 PF03477 ATP cone domain AP3564_RS19795 PF02675 S-adenosylmethionine decarboxylase AP3564_RS19800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP3564_RS19800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AP3564_RS19805 PF01121 Dephospho-CoA kinase AP3564_RS19810 PF02659 Putative manganese efflux pump AP3564_RS19815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AP3564_RS19815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AP3564_RS19815 PF06827 Zinc finger found in FPG and IleRS AP3564_RS19820 PF00476 DNA polymerase family A AP3564_RS19820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AP3564_RS19820 PF01367 5'-3' exonuclease, C-terminal SAM fold AP3564_RS19825 PF01145 SPFH domain / Band 7 family AP3564_RS19830 PF01145 SPFH domain / Band 7 family AP3564_RS19835 PF00989 PAS fold AP3564_RS19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP3564_RS19835 PF16736 Single Cache-like AP3564_RS19835 PF00512 His Kinase A (phospho-acceptor) domain AP3564_RS19840 PF00072 Response regulator receiver domain AP3564_RS19840 PF00486 Transcriptional regulatory protein, C terminal AP3564_RS19845 PF00056 lactate/malate dehydrogenase, NAD binding domain AP3564_RS19845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AP3564_RS19850 PF00180 Isocitrate/isopropylmalate dehydrogenase AP3564_RS19855 PF00285 Citrate synthase, C-terminal domain AP3564_RS19860 PF04186 FxsA cytoplasmic membrane protein AP3564_RS19865 PF00224 Pyruvate kinase, barrel domain AP3564_RS19865 PF00391 PEP-utilising enzyme, mobile domain AP3564_RS19865 PF02887 Pyruvate kinase, alpha/beta domain AP3564_RS19870 PF00365 Phosphofructokinase AP3564_RS19880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AP3564_RS19885 PF17848 Acetyl-coA carboxylase zinc finger domain AP3564_RS19885 PF01039 Carboxyl transferase domain AP3564_RS19890 PF00390 Malic enzyme, N-terminal domain AP3564_RS19890 PF03949 Malic enzyme, NAD binding domain AP3564_RS19895 PF01336 OB-fold nucleic acid binding domain AP3564_RS19895 PF02811 PHP domain AP3564_RS19895 PF14579 Helix-hairpin-helix motif AP3564_RS19895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AP3564_RS19895 PF07733 Bacterial DNA polymerase III alpha NTPase domain AP3564_RS19900 PF14034 Sporulation protein YtrH AP3564_RS19910 PF02272 DHHA1 domain AP3564_RS19910 PF01368 DHH family AP3564_RS19920 PF07085 DRTGG domain AP3564_RS19920 PF03061 Thioesterase superfamily AP3564_RS19920 PF00392 Bacterial regulatory proteins, gntR family AP3564_RS19920 PF00571 CBS domain AP3564_RS19935 PF14698 Argininosuccinate lyase C-terminal AP3564_RS19935 PF00206 Lyase AP3564_RS19940 PF00764 Arginosuccinate synthase AP3564_RS19960 PF00871 Acetokinase family AP3564_RS19965 PF02384 N-6 DNA Methylase AP3564_RS19970 PF08534 Redoxin AP3564_RS19975 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AP3564_RS19985 PF06271 RDD family AP3564_RS19990 PF01343 Peptidase family S49 AP3564_RS19995 PF01513 ATP-NAD kinase AP3564_RS20000 PF00269 Small, acid-soluble spore proteins, alpha/beta type AP3564_RS20005 PF02926 THUMP domain AP3564_RS20005 PF02568 Thiamine biosynthesis protein (ThiI) AP3564_RS20010 PF00266 Aminotransferase class-V AP3564_RS20015 PF00005 ABC transporter AP3564_RS20015 PF08402 TOBE domain AP3564_RS20020 PF00248 Aldo/keto reductase family AP3564_RS20025 PF06160 Septation ring formation regulator, EzrA AP3564_RS20030 PF02811 PHP domain AP3564_RS20035 PF00440 Bacterial regulatory proteins, tetR family AP3564_RS20040 PF13185 GAF domain AP3564_RS20045 PF00990 Diguanylate cyclase, GGDEF domain AP3564_RS20055 PF01479 S4 domain AP3564_RS20055 PF00163 Ribosomal protein S4/S9 N-terminal domain AP3564_RS20110 PF01609 Transposase DDE domain AP3564_RS20130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP3564_RS20130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP3564_RS20135 PF01791 DeoC/LacD family aldolase AP3564_RS20140 PF08240 Alcohol dehydrogenase GroES-like domain AP3564_RS20140 PF00107 Zinc-binding dehydrogenase AP3564_RS20150 PF01380 SIS domain AP3564_RS20150 PF01418 Helix-turn-helix domain, rpiR family AP3564_RS20225 PF05593 RHS Repeat AP3564_RS20235 PF09299 Mu transposase, C-terminal AP3564_RS20235 PF00665 Integrase core domain