AP3564_RS00245	PWY-2201	folate transformations I
AP3564_RS00245	PWY-3841	folate transformations II
AP3564_RS00285	PWY-6803	phosphatidylcholine acyl editing
AP3564_RS00285	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AP3564_RS00285	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AP3564_RS00285	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AP3564_RS00285	PWY-7783	AP3564_RS00285
AP3564_RS00325	PWY-4381	fatty acid biosynthesis initiation I
AP3564_RS00335	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS00400	PWY-6906	chitin derivatives degradation
AP3564_RS00400	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AP3564_RS00400	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AP3564_RS00500	PWY-5723	Rubisco shunt
AP3564_RS00505	PWY-5723	Rubisco shunt
AP3564_RS00605	PWY-7431	aromatic biogenic amine degradation (bacteria)
AP3564_RS00625	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AP3564_RS00625	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS00625	PWY-6168	flavin biosynthesis III (fungi)
AP3564_RS00625	PWY-7863	AP3564_RS00625
AP3564_RS00630	PWY-2941	L-lysine biosynthesis II
AP3564_RS00630	PWY-2942	L-lysine biosynthesis III
AP3564_RS00630	PWY-5097	L-lysine biosynthesis VI
AP3564_RS00760	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS00770	PWY-6123	inosine-5'-phosphate biosynthesis I
AP3564_RS00770	PWY-7234	inosine-5'-phosphate biosynthesis III
AP3564_RS00780	PWY-6123	inosine-5'-phosphate biosynthesis I
AP3564_RS00780	PWY-6124	inosine-5'-phosphate biosynthesis II
AP3564_RS00780	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS00780	PWY-7234	inosine-5'-phosphate biosynthesis III
AP3564_RS00785	PWY-6123	inosine-5'-phosphate biosynthesis I
AP3564_RS00785	PWY-6124	inosine-5'-phosphate biosynthesis II
AP3564_RS00785	PWY-7234	inosine-5'-phosphate biosynthesis III
AP3564_RS00790	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00790	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00790	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00795	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00795	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00795	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00800	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00800	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00800	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00805	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00805	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00805	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AP3564_RS00810	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00810	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00810	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00815	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00815	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AP3564_RS00820	PWY-6123	inosine-5'-phosphate biosynthesis I
AP3564_RS00820	PWY-6124	inosine-5'-phosphate biosynthesis II
AP3564_RS00820	PWY-7234	inosine-5'-phosphate biosynthesis III
AP3564_RS00835	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AP3564_RS00835	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AP3564_RS00835	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AP3564_RS00840	PWY-6610	adenine and adenosine salvage IV
AP3564_RS00895	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AP3564_RS01150	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS01335	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS01445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS01445	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AP3564_RS01555	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS01555	PWY-1622	formaldehyde assimilation I (serine pathway)
AP3564_RS01555	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AP3564_RS01555	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS01555	PWY-5723	Rubisco shunt
AP3564_RS01555	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS01555	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS01555	PWY-6886	1-butanol autotrophic biosynthesis
AP3564_RS01555	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS01555	PWY-7003	glycerol degradation to butanol
AP3564_RS01555	PWY-7124	ethylene biosynthesis V (engineered)
AP3564_RS01555	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AP3564_RS01680	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS01680	PWY-5532	adenosine nucleotides degradation IV
AP3564_RS01680	PWY-5723	Rubisco shunt
AP3564_RS01685	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS01690	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS01690	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS01690	PWY-6416	quinate degradation II
AP3564_RS01690	PWY-6707	gallate biosynthesis
AP3564_RS01695	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS01695	PWY-5389	3-methylthiopropanoate biosynthesis
AP3564_RS01700	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AP3564_RS01705	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS01705	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AP3564_RS01720	PWY-5392	reductive TCA cycle II
AP3564_RS01720	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS01720	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS01720	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS01720	PWY-6728	methylaspartate cycle
AP3564_RS01720	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS01720	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS01720	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AP3564_RS02175	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
AP3564_RS02175	PWY-5641	2-nitrotoluene degradation
AP3564_RS02180	PWY-6683	sulfate reduction III (assimilatory)
AP3564_RS02375	PWY-3341	L-proline biosynthesis III
AP3564_RS02375	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AP3564_RS02380	PWY-3341	L-proline biosynthesis III
AP3564_RS02380	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AP3564_RS02440	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AP3564_RS02470	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS02630	PWY-4261	glycerol degradation I
AP3564_RS02630	PWY-6118	glycerol-3-phosphate shuttle
AP3564_RS02630	PWY-6952	glycerophosphodiester degradation
AP3564_RS02675	PWY-4261	glycerol degradation I
AP3564_RS02790	PWY-4261	glycerol degradation I
AP3564_RS02815	PWY-7723	AP3564_RS02815
AP3564_RS02855	PWY-6700	queuosine biosynthesis
AP3564_RS02865	PWY-6004	glycine betaine biosynthesis V (from glycine)
AP3564_RS02945	PWY-6749	CMP-legionaminate biosynthesis I
AP3564_RS03015	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AP3564_RS03015	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS03015	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS03015	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS03015	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS03015	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS03015	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS03015	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AP3564_RS03020	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AP3564_RS03020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS03020	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS03020	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS03020	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS03020	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS03020	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS03020	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AP3564_RS03255	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AP3564_RS03255	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AP3564_RS03255	PWY-7766	AP3564_RS03255
AP3564_RS03265	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AP3564_RS03325	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS03325	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS03350	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AP3564_RS03350	PWY-3461	L-tyrosine biosynthesis II
AP3564_RS03350	PWY-3462	L-phenylalanine biosynthesis II
AP3564_RS03350	PWY-6120	L-tyrosine biosynthesis III
AP3564_RS03350	PWY-6164	3-dehydroquinate biosynthesis I
AP3564_RS03350	PWY-6627	salinosporamide A biosynthesis
AP3564_RS03350	PWY-7626	bacilysin biosynthesis
AP3564_RS03350	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AP3564_RS03640	PWY-4261	glycerol degradation I
AP3564_RS03680	PWY-2201	folate transformations I
AP3564_RS03680	PWY-3841	folate transformations II
AP3564_RS03735	PWY-4261	glycerol degradation I
AP3564_RS03760	PWY-3221	dTDP-L-rhamnose biosynthesis II
AP3564_RS03760	PWY-6808	dTDP-D-forosamine biosynthesis
AP3564_RS03760	PWY-6942	dTDP-D-desosamine biosynthesis
AP3564_RS03760	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AP3564_RS03760	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AP3564_RS03760	PWY-6974	dTDP-L-olivose biosynthesis
AP3564_RS03760	PWY-6976	dTDP-L-mycarose biosynthesis
AP3564_RS03760	PWY-7104	dTDP-L-megosamine biosynthesis
AP3564_RS03760	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AP3564_RS03760	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AP3564_RS03760	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AP3564_RS03760	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AP3564_RS03760	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AP3564_RS03760	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AP3564_RS03760	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AP3564_RS03760	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AP3564_RS03760	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AP3564_RS03760	PWY-7688	AP3564_RS03760
AP3564_RS03760	PWY-7814	AP3564_RS03760
AP3564_RS03770	PWY-3221	dTDP-L-rhamnose biosynthesis II
AP3564_RS03770	PWY-6808	dTDP-D-forosamine biosynthesis
AP3564_RS03770	PWY-6942	dTDP-D-desosamine biosynthesis
AP3564_RS03770	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AP3564_RS03770	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AP3564_RS03770	PWY-6974	dTDP-L-olivose biosynthesis
AP3564_RS03770	PWY-6976	dTDP-L-mycarose biosynthesis
AP3564_RS03770	PWY-7104	dTDP-L-megosamine biosynthesis
AP3564_RS03770	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AP3564_RS03770	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AP3564_RS03770	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AP3564_RS03770	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AP3564_RS03770	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AP3564_RS03770	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AP3564_RS03770	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AP3564_RS03770	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AP3564_RS03770	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AP3564_RS03770	PWY-7688	AP3564_RS03770
AP3564_RS03770	PWY-7814	AP3564_RS03770
AP3564_RS03830	PWY-7651	heparan sulfate degradation
AP3564_RS03845	PWY-3801	sucrose degradation II (sucrose synthase)
AP3564_RS03845	PWY-6527	stachyose degradation
AP3564_RS03845	PWY-7238	sucrose biosynthesis II
AP3564_RS03845	PWY-7343	UDP-glucose biosynthesis
AP3564_RS03845	PWY-7817	AP3564_RS03845
AP3564_RS03900	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AP3564_RS03900	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AP3564_RS03900	PWY-5989	stearate biosynthesis II (bacteria and plants)
AP3564_RS03900	PWY-5994	palmitate biosynthesis I (animals and fungi)
AP3564_RS03900	PWY-6113	superpathway of mycolate biosynthesis
AP3564_RS03900	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AP3564_RS03900	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AP3564_RS03900	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS03900	PWY-7663	gondoate biosynthesis (anaerobic)
AP3564_RS03900	PWY-7664	oleate biosynthesis IV (anaerobic)
AP3564_RS03900	PWY-7858	AP3564_RS03900
AP3564_RS03900	PWYG-321	mycolate biosynthesis
AP3564_RS03975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS03975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS03995	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS04005	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS04050	PWY-7183	pyrimidine nucleobases salvage I
AP3564_RS04055	PWY-1622	formaldehyde assimilation I (serine pathway)
AP3564_RS04055	PWY-181	photorespiration
AP3564_RS04055	PWY-2161	folate polyglutamylation
AP3564_RS04055	PWY-2201	folate transformations I
AP3564_RS04055	PWY-3661	glycine betaine degradation I
AP3564_RS04055	PWY-3661-1	glycine betaine degradation II (mammalian)
AP3564_RS04055	PWY-3841	folate transformations II
AP3564_RS04055	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS04120	PWY-7199	pyrimidine deoxyribonucleosides salvage
AP3564_RS04130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS04135	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS04140	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS04140	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS04145	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS04145	PWY-5723	Rubisco shunt
AP3564_RS04150	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS04150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS04150	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS04150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS04150	PWY-7385	1,3-propanediol biosynthesis (engineered)
AP3564_RS04165	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AP3564_RS04165	PWY-7177	UTP and CTP dephosphorylation II
AP3564_RS04165	PWY-7185	UTP and CTP dephosphorylation I
AP3564_RS04195	PWY-40	putrescine biosynthesis I
AP3564_RS04195	PWY-6305	putrescine biosynthesis IV
AP3564_RS04210	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AP3564_RS04250	PWY-1281	sulfoacetaldehyde degradation I
AP3564_RS04250	PWY-5482	pyruvate fermentation to acetate II
AP3564_RS04250	PWY-5485	pyruvate fermentation to acetate IV
AP3564_RS04250	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS04250	PWY-6637	sulfolactate degradation II
AP3564_RS04275	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS04275	PWY-4521	arsenite oxidation I (respiratory)
AP3564_RS04275	PWY-6692	Fe(II) oxidation
AP3564_RS04275	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS04335	PWY-6910	hydroxymethylpyrimidine salvage
AP3564_RS04335	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS04335	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AP3564_RS04340	PWY-5381	pyridine nucleotide cycling (plants)
AP3564_RS04370	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS04370	PWY-4521	arsenite oxidation I (respiratory)
AP3564_RS04370	PWY-6692	Fe(II) oxidation
AP3564_RS04370	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS04385	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AP3564_RS04385	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AP3564_RS04385	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS04385	PWY-702	L-methionine biosynthesis II
AP3564_RS04390	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AP3564_RS04390	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AP3564_RS04390	PWY-6897	thiamin salvage II
AP3564_RS04390	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AP3564_RS04390	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AP3564_RS04390	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS04390	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AP3564_RS04395	PWY-6897	thiamin salvage II
AP3564_RS04395	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS04395	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AP3564_RS04445	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AP3564_RS04445	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AP3564_RS04445	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS04445	PWY-702	L-methionine biosynthesis II
AP3564_RS04560	PWY-2582	brassinosteroid biosynthesis II
AP3564_RS04560	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AP3564_RS04560	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AP3564_RS04560	PWY-6948	sitosterol degradation to androstenedione
AP3564_RS04560	PWY-699	brassinosteroid biosynthesis I
AP3564_RS04560	PWY-7299	progesterone biosynthesis
AP3564_RS04660	PWY-101	photosynthesis light reactions
AP3564_RS04695	PWY-5481	pyruvate fermentation to lactate
AP3564_RS04695	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS04770	PWY-4261	glycerol degradation I
AP3564_RS04815	PWY-6825	phosphatidylcholine biosynthesis V
AP3564_RS04865	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS04880	PWY-7805	AP3564_RS04880
AP3564_RS04880	PWY-7807	AP3564_RS04880
AP3564_RS05045	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AP3564_RS05045	PWY-6596	adenosine nucleotides degradation I
AP3564_RS05045	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS05050	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS05050	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS05060	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AP3564_RS05065	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AP3564_RS05070	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AP3564_RS05165	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AP3564_RS05165	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS05165	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS05165	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AP3564_RS05165	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS05165	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS05200	PWY-2201	folate transformations I
AP3564_RS05250	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS05270	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AP3564_RS05270	PWY-5667	CDP-diacylglycerol biosynthesis I
AP3564_RS05270	PWY-6453	stigma estolide biosynthesis
AP3564_RS05270	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AP3564_RS05270	PWY-7587	oleate biosynthesis III (cyanobacteria)
AP3564_RS05285	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AP3564_RS05400	PWY-6599	guanine and guanosine salvage II
AP3564_RS05400	PWY-6609	adenine and adenosine salvage III
AP3564_RS05400	PWY-6610	adenine and adenosine salvage IV
AP3564_RS05400	PWY-6620	guanine and guanosine salvage
AP3564_RS05410	PWY-3961	phosphopantothenate biosynthesis II
AP3564_RS05425	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS05430	PWY-5958	acridone alkaloid biosynthesis
AP3564_RS05430	PWY-6543	4-aminobenzoate biosynthesis
AP3564_RS05430	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AP3564_RS05430	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AP3564_RS05435	PWY-5958	acridone alkaloid biosynthesis
AP3564_RS05435	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AP3564_RS05435	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AP3564_RS05445	PWY-6614	tetrahydrofolate biosynthesis
AP3564_RS05450	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AP3564_RS05450	PWY-6148	tetrahydromethanopterin biosynthesis
AP3564_RS05450	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AP3564_RS05450	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AP3564_RS05455	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AP3564_RS05455	PWY-6148	tetrahydromethanopterin biosynthesis
AP3564_RS05455	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AP3564_RS05455	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AP3564_RS05455	PWY-7852	AP3564_RS05455
AP3564_RS05455	PWY-7853	AP3564_RS05455
AP3564_RS05730	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS05735	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS05740	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS05745	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS05745	PWY-7274	D-cycloserine biosynthesis
AP3564_RS05960	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS05965	PWY-7799	AP3564_RS05965
AP3564_RS05965	PWY-7800	AP3564_RS05965
AP3564_RS06190	PWY-6749	CMP-legionaminate biosynthesis I
AP3564_RS06195	PWY-6749	CMP-legionaminate biosynthesis I
AP3564_RS06275	PWY-5686	UMP biosynthesis
AP3564_RS06275	PWY-7790	AP3564_RS06275
AP3564_RS06275	PWY-7791	AP3564_RS06275
AP3564_RS06310	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AP3564_RS06310	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AP3564_RS06310	PWY-7242	D-fructuronate degradation
AP3564_RS06310	PWY-7310	D-glucosaminate degradation
AP3564_RS06310	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AP3564_RS06315	PWY-7242	D-fructuronate degradation
AP3564_RS06380	PWY-723	alkylnitronates degradation
AP3564_RS06410	PWY-6728	methylaspartate cycle
AP3564_RS06410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS06410	PWY-7118	chitin degradation to ethanol
AP3564_RS06410	PWY-7294	xylose degradation IV
AP3564_RS06410	PWY-7295	L-arabinose degradation IV
AP3564_RS06410	PWY-7854	AP3564_RS06410
AP3564_RS06495	PWY-4261	glycerol degradation I
AP3564_RS06520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS06520	PWY-5723	Rubisco shunt
AP3564_RS06695	PWY-5162	2-oxopentenoate degradation
AP3564_RS06700	PWY-5162	2-oxopentenoate degradation
AP3564_RS06700	PWY-5436	L-threonine degradation IV
AP3564_RS06700	PWY-5480	pyruvate fermentation to ethanol I
AP3564_RS06700	PWY-6587	pyruvate fermentation to ethanol III
AP3564_RS06700	PWY-7085	triethylamine degradation
AP3564_RS06700	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS06880	PWY-5057	L-valine degradation II
AP3564_RS06880	PWY-5076	L-leucine degradation III
AP3564_RS06880	PWY-5078	L-isoleucine degradation II
AP3564_RS06880	PWY-5101	L-isoleucine biosynthesis II
AP3564_RS06880	PWY-5103	L-isoleucine biosynthesis III
AP3564_RS06880	PWY-5104	L-isoleucine biosynthesis IV
AP3564_RS06880	PWY-5108	L-isoleucine biosynthesis V
AP3564_RS06880	PWY-7767	AP3564_RS06880
AP3564_RS06895	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS06895	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS06900	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS06900	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS06925	PWY-6012	acyl carrier protein metabolism I
AP3564_RS06925	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AP3564_RS06935	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AP3564_RS07085	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AP3564_RS07085	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AP3564_RS07085	PWY-6896	thiamin salvage I
AP3564_RS07085	PWY-6897	thiamin salvage II
AP3564_RS07095	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AP3564_RS07095	PWY-5368	dimorphecolate biosynthesis
AP3564_RS07095	PWY-5995	linoleate biosynthesis I (plants)
AP3564_RS07095	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AP3564_RS07095	PWY-6803	phosphatidylcholine acyl editing
AP3564_RS07095	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AP3564_RS07095	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AP3564_RS07095	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AP3564_RS07095	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AP3564_RS07095	PWY-7470	phosphatidylcholine biosynthesis VII
AP3564_RS07095	PWY-7618	ricinoleate biosynthesis
AP3564_RS07105	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AP3564_RS07105	PWY-5368	dimorphecolate biosynthesis
AP3564_RS07105	PWY-5995	linoleate biosynthesis I (plants)
AP3564_RS07105	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AP3564_RS07105	PWY-6803	phosphatidylcholine acyl editing
AP3564_RS07105	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AP3564_RS07105	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AP3564_RS07105	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AP3564_RS07105	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AP3564_RS07105	PWY-7470	phosphatidylcholine biosynthesis VII
AP3564_RS07105	PWY-7618	ricinoleate biosynthesis
AP3564_RS07255	PWY-5642	2,4-dinitrotoluene degradation
AP3564_RS07255	PWY-6373	acrylate degradation
AP3564_RS07260	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AP3564_RS07425	PWY-6531	mannitol cycle
AP3564_RS07510	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS07610	PWY-2941	L-lysine biosynthesis II
AP3564_RS07610	PWY-2942	L-lysine biosynthesis III
AP3564_RS07610	PWY-5097	L-lysine biosynthesis VI
AP3564_RS07625	PWY-5723	Rubisco shunt
AP3564_RS07630	PWY-5723	Rubisco shunt
AP3564_RS07655	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AP3564_RS07655	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AP3564_RS07685	PWY-3861	mannitol degradation II
AP3564_RS07685	PWY-3881	mannitol biosynthesis
AP3564_RS07685	PWY-5659	GDP-mannose biosynthesis
AP3564_RS07685	PWY-6992	1,5-anhydrofructose degradation
AP3564_RS07685	PWY-7456	mannan degradation
AP3564_RS07685	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AP3564_RS07685	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AP3564_RS07720	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AP3564_RS07720	PWY-622	starch biosynthesis
AP3564_RS07720	PWY-7815	AP3564_RS07720
AP3564_RS07720	PWY-7816	AP3564_RS07720
AP3564_RS07720	PWY-7819	AP3564_RS07720
AP3564_RS07770	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS07770	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AP3564_RS07770	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS07780	PWY-3801	sucrose degradation II (sucrose synthase)
AP3564_RS07780	PWY-6527	stachyose degradation
AP3564_RS07780	PWY-7238	sucrose biosynthesis II
AP3564_RS07780	PWY-7343	UDP-glucose biosynthesis
AP3564_RS07780	PWY-7817	AP3564_RS07780
AP3564_RS07785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS07785	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AP3564_RS07785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS07910	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AP3564_RS07910	PWY-6749	CMP-legionaminate biosynthesis I
AP3564_RS07910	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AP3564_RS07910	PWY-7102	bisabolene biosynthesis
AP3564_RS07910	PWY-7131	CMP-legionaminate biosynthesis II
AP3564_RS07910	PWY-7721	AP3564_RS07910
AP3564_RS07910	PWY-7736	AP3564_RS07910
AP3564_RS07925	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AP3564_RS08080	PWY-5169	cyanurate degradation
AP3564_RS08080	PWY-5703	urea degradation I
AP3564_RS08085	PWY-5169	cyanurate degradation
AP3564_RS08085	PWY-5703	urea degradation I
AP3564_RS08085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AP3564_RS08110	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS08240	PWY-4261	glycerol degradation I
AP3564_RS08245	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS08245	PWY-5723	Rubisco shunt
AP3564_RS08290	PWY-4261	glycerol degradation I
AP3564_RS08440	PWY-1361	benzoyl-CoA degradation I (aerobic)
AP3564_RS08440	PWY-5109	2-methylbutanoate biosynthesis
AP3564_RS08440	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AP3564_RS08440	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AP3564_RS08440	PWY-5177	glutaryl-CoA degradation
AP3564_RS08440	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AP3564_RS08440	PWY-6435	4-hydroxybenzoate biosynthesis V
AP3564_RS08440	PWY-6583	pyruvate fermentation to butanol I
AP3564_RS08440	PWY-6863	pyruvate fermentation to hexanol
AP3564_RS08440	PWY-6883	pyruvate fermentation to butanol II
AP3564_RS08440	PWY-6944	androstenedione degradation
AP3564_RS08440	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AP3564_RS08440	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AP3564_RS08440	PWY-7007	methyl ketone biosynthesis
AP3564_RS08440	PWY-7046	4-coumarate degradation (anaerobic)
AP3564_RS08440	PWY-7094	fatty acid salvage
AP3564_RS08440	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AP3564_RS08440	PWY-735	jasmonic acid biosynthesis
AP3564_RS08440	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AP3564_RS08440	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AP3564_RS08440	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AP3564_RS08440	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AP3564_RS08440	PWY-7726	AP3564_RS08440
AP3564_RS08440	PWY-7778	AP3564_RS08440
AP3564_RS08440	PWY-7779	AP3564_RS08440
AP3564_RS08440	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AP3564_RS08710	PWY-7805	AP3564_RS08710
AP3564_RS08710	PWY-7807	AP3564_RS08710
AP3564_RS08945	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS08945	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS08945	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS08945	PWY-7003	glycerol degradation to butanol
AP3564_RS08950	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS08950	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS08950	PWY-6886	1-butanol autotrophic biosynthesis
AP3564_RS08950	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS08950	PWY-7003	glycerol degradation to butanol
AP3564_RS08955	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS08955	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS08955	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS08955	PWY-7003	glycerol degradation to butanol
AP3564_RS08960	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS08960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AP3564_RS08960	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS08960	PWY-5723	Rubisco shunt
AP3564_RS08960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS08960	PWY-6886	1-butanol autotrophic biosynthesis
AP3564_RS08960	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS08960	PWY-7003	glycerol degradation to butanol
AP3564_RS08960	PWY-7124	ethylene biosynthesis V (engineered)
AP3564_RS08960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AP3564_RS08965	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS08965	PWY-1622	formaldehyde assimilation I (serine pathway)
AP3564_RS08965	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AP3564_RS08965	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS08965	PWY-5723	Rubisco shunt
AP3564_RS08965	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS08965	PWY-6886	1-butanol autotrophic biosynthesis
AP3564_RS08965	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS08965	PWY-7003	glycerol degradation to butanol
AP3564_RS08965	PWY-7124	ethylene biosynthesis V (engineered)
AP3564_RS08965	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AP3564_RS09005	PWY-2201	folate transformations I
AP3564_RS09005	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS09015	PWY-5392	reductive TCA cycle II
AP3564_RS09015	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS09015	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS09015	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS09015	PWY-6728	methylaspartate cycle
AP3564_RS09015	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS09015	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS09015	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AP3564_RS09070	PWY-1361	benzoyl-CoA degradation I (aerobic)
AP3564_RS09070	PWY-5109	2-methylbutanoate biosynthesis
AP3564_RS09070	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AP3564_RS09070	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AP3564_RS09070	PWY-5177	glutaryl-CoA degradation
AP3564_RS09070	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AP3564_RS09070	PWY-6435	4-hydroxybenzoate biosynthesis V
AP3564_RS09070	PWY-6583	pyruvate fermentation to butanol I
AP3564_RS09070	PWY-6863	pyruvate fermentation to hexanol
AP3564_RS09070	PWY-6883	pyruvate fermentation to butanol II
AP3564_RS09070	PWY-6944	androstenedione degradation
AP3564_RS09070	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AP3564_RS09070	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AP3564_RS09070	PWY-7007	methyl ketone biosynthesis
AP3564_RS09070	PWY-7046	4-coumarate degradation (anaerobic)
AP3564_RS09070	PWY-7094	fatty acid salvage
AP3564_RS09070	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AP3564_RS09070	PWY-735	jasmonic acid biosynthesis
AP3564_RS09070	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AP3564_RS09070	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AP3564_RS09070	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AP3564_RS09070	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AP3564_RS09070	PWY-7726	AP3564_RS09070
AP3564_RS09070	PWY-7778	AP3564_RS09070
AP3564_RS09070	PWY-7779	AP3564_RS09070
AP3564_RS09070	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AP3564_RS09140	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS09140	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS09140	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS09140	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AP3564_RS09185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AP3564_RS09185	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AP3564_RS09245	PWY-702	L-methionine biosynthesis II
AP3564_RS09270	PWY-2941	L-lysine biosynthesis II
AP3564_RS09270	PWY-5097	L-lysine biosynthesis VI
AP3564_RS09280	PWY-101	photosynthesis light reactions
AP3564_RS09340	PWY-5642	2,4-dinitrotoluene degradation
AP3564_RS09340	PWY-6373	acrylate degradation
AP3564_RS09455	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS09490	PWY-3801	sucrose degradation II (sucrose synthase)
AP3564_RS09490	PWY-5054	sorbitol biosynthesis I
AP3564_RS09490	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AP3564_RS09490	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AP3564_RS09490	PWY-5659	GDP-mannose biosynthesis
AP3564_RS09490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS09490	PWY-621	sucrose degradation III (sucrose invertase)
AP3564_RS09490	PWY-622	starch biosynthesis
AP3564_RS09490	PWY-6981	chitin biosynthesis
AP3564_RS09490	PWY-6992	1,5-anhydrofructose degradation
AP3564_RS09490	PWY-7238	sucrose biosynthesis II
AP3564_RS09490	PWY-7347	sucrose biosynthesis III
AP3564_RS09490	PWY-7385	1,3-propanediol biosynthesis (engineered)
AP3564_RS09645	PWY-5839	menaquinol-7 biosynthesis
AP3564_RS09645	PWY-5851	demethylmenaquinol-9 biosynthesis
AP3564_RS09645	PWY-5852	demethylmenaquinol-8 biosynthesis I
AP3564_RS09645	PWY-5853	demethylmenaquinol-6 biosynthesis I
AP3564_RS09645	PWY-5890	menaquinol-10 biosynthesis
AP3564_RS09645	PWY-5891	menaquinol-11 biosynthesis
AP3564_RS09645	PWY-5892	menaquinol-12 biosynthesis
AP3564_RS09645	PWY-5895	menaquinol-13 biosynthesis
AP3564_RS09650	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS09650	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AP3564_RS09650	PWY-6406	salicylate biosynthesis I
AP3564_RS09655	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS09660	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS09665	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS09670	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AP3564_RS09685	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AP3564_RS09685	PWY-6153	autoinducer AI-2 biosynthesis I
AP3564_RS09685	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AP3564_RS09700	PWY-6502	oxidized GTP and dGTP detoxification
AP3564_RS09745	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS09745	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AP3564_RS09750	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AP3564_RS09750	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AP3564_RS09780	PWY-5773	gossypol biosynthesis
AP3564_RS09780	PWY-5828	lacinilene C biosynthesis
AP3564_RS09825	PWY-5194	siroheme biosynthesis
AP3564_RS09825	PWY-5196	factor 430 biosynthesis
AP3564_RS09825	PWY-5441	S-methyl-L-methionine cycle
AP3564_RS09825	PWY-702	L-methionine biosynthesis II
AP3564_RS09825	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AP3564_RS09890	PWY-6936	seleno-amino acid biosynthesis
AP3564_RS09970	PWY-6728	methylaspartate cycle
AP3564_RS09970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS09970	PWY-7118	chitin degradation to ethanol
AP3564_RS09970	PWY-7294	xylose degradation IV
AP3564_RS09970	PWY-7295	L-arabinose degradation IV
AP3564_RS09970	PWY-7854	AP3564_RS09970
AP3564_RS09975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS10165	PWY-2201	folate transformations I
AP3564_RS10165	PWY-3841	folate transformations II
AP3564_RS10170	PWY-2201	folate transformations I
AP3564_RS10170	PWY-3841	folate transformations II
AP3564_RS10225	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS10225	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS10230	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS10235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS10235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS10245	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS10245	PWY-5686	UMP biosynthesis
AP3564_RS10245	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS10245	PWY-7790	AP3564_RS10245
AP3564_RS10245	PWY-7791	AP3564_RS10245
AP3564_RS10250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS10250	PWY-5686	UMP biosynthesis
AP3564_RS10250	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS10250	PWY-7790	AP3564_RS10250
AP3564_RS10250	PWY-7791	AP3564_RS10250
AP3564_RS10255	PWY-4981	L-proline biosynthesis II (from arginine)
AP3564_RS10255	PWY-4984	urea cycle
AP3564_RS10255	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS10295	PWY-4381	fatty acid biosynthesis initiation I
AP3564_RS10400	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AP3564_RS10400	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AP3564_RS10400	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AP3564_RS10420	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AP3564_RS10420	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AP3564_RS10420	PWY-6897	thiamin salvage II
AP3564_RS10420	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AP3564_RS10420	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AP3564_RS10420	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS10420	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AP3564_RS10435	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS10435	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS10445	PWY-6910	hydroxymethylpyrimidine salvage
AP3564_RS10445	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS10445	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AP3564_RS10450	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AP3564_RS10450	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AP3564_RS10450	PWY-5989	stearate biosynthesis II (bacteria and plants)
AP3564_RS10450	PWY-6113	superpathway of mycolate biosynthesis
AP3564_RS10450	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AP3564_RS10450	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AP3564_RS10450	PWY-7663	gondoate biosynthesis (anaerobic)
AP3564_RS10450	PWY-7664	oleate biosynthesis IV (anaerobic)
AP3564_RS10450	PWY-7858	AP3564_RS10450
AP3564_RS10450	PWYG-321	mycolate biosynthesis
AP3564_RS10805	PWY-6619	adenine and adenosine salvage VI
AP3564_RS10855	PWY-6523	nitrite-dependent anaerobic methane oxidation
AP3564_RS10855	PWY-6748	nitrate reduction VII (denitrification)
AP3564_RS10855	PWY-7084	nitrifier denitrification
AP3564_RS10995	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AP3564_RS11010	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS11310	PWY-1881	formate oxidation to CO<sub>2</sub>
AP3564_RS11310	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS11310	PWY-6696	oxalate degradation III
AP3564_RS11485	PWY-1361	benzoyl-CoA degradation I (aerobic)
AP3564_RS11485	PWY-5109	2-methylbutanoate biosynthesis
AP3564_RS11485	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AP3564_RS11485	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AP3564_RS11485	PWY-5177	glutaryl-CoA degradation
AP3564_RS11485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AP3564_RS11485	PWY-6435	4-hydroxybenzoate biosynthesis V
AP3564_RS11485	PWY-6583	pyruvate fermentation to butanol I
AP3564_RS11485	PWY-6863	pyruvate fermentation to hexanol
AP3564_RS11485	PWY-6883	pyruvate fermentation to butanol II
AP3564_RS11485	PWY-6944	androstenedione degradation
AP3564_RS11485	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AP3564_RS11485	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AP3564_RS11485	PWY-7007	methyl ketone biosynthesis
AP3564_RS11485	PWY-7046	4-coumarate degradation (anaerobic)
AP3564_RS11485	PWY-7094	fatty acid salvage
AP3564_RS11485	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AP3564_RS11485	PWY-735	jasmonic acid biosynthesis
AP3564_RS11485	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AP3564_RS11485	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AP3564_RS11485	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AP3564_RS11485	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AP3564_RS11485	PWY-7726	AP3564_RS11485
AP3564_RS11485	PWY-7778	AP3564_RS11485
AP3564_RS11485	PWY-7779	AP3564_RS11485
AP3564_RS11485	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AP3564_RS11490	PWY-1361	benzoyl-CoA degradation I (aerobic)
AP3564_RS11490	PWY-5109	2-methylbutanoate biosynthesis
AP3564_RS11490	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AP3564_RS11490	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AP3564_RS11490	PWY-5177	glutaryl-CoA degradation
AP3564_RS11490	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AP3564_RS11490	PWY-6435	4-hydroxybenzoate biosynthesis V
AP3564_RS11490	PWY-6583	pyruvate fermentation to butanol I
AP3564_RS11490	PWY-6863	pyruvate fermentation to hexanol
AP3564_RS11490	PWY-6883	pyruvate fermentation to butanol II
AP3564_RS11490	PWY-6944	androstenedione degradation
AP3564_RS11490	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AP3564_RS11490	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AP3564_RS11490	PWY-7007	methyl ketone biosynthesis
AP3564_RS11490	PWY-7046	4-coumarate degradation (anaerobic)
AP3564_RS11490	PWY-7094	fatty acid salvage
AP3564_RS11490	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AP3564_RS11490	PWY-735	jasmonic acid biosynthesis
AP3564_RS11490	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AP3564_RS11490	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AP3564_RS11490	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AP3564_RS11490	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AP3564_RS11490	PWY-7726	AP3564_RS11490
AP3564_RS11490	PWY-7778	AP3564_RS11490
AP3564_RS11490	PWY-7779	AP3564_RS11490
AP3564_RS11490	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AP3564_RS11570	PWY-6610	adenine and adenosine salvage IV
AP3564_RS11620	PWY-7533	gliotoxin biosynthesis
AP3564_RS11765	PWY-5443	aminopropanol phosphate biosynthesis I
AP3564_RS11770	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AP3564_RS11770	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AP3564_RS11770	PWY-6269	adenosylcobalamin salvage from cobinamide II
AP3564_RS11780	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AP3564_RS11780	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AP3564_RS11780	PWY-6269	adenosylcobalamin salvage from cobinamide II
AP3564_RS11790	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AP3564_RS11790	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AP3564_RS11790	PWY-6269	adenosylcobalamin salvage from cobinamide II
AP3564_RS11830	PWY-2941	L-lysine biosynthesis II
AP3564_RS11830	PWY-2942	L-lysine biosynthesis III
AP3564_RS11830	PWY-5097	L-lysine biosynthesis VI
AP3564_RS11830	PWY-6559	spermidine biosynthesis II
AP3564_RS11830	PWY-6562	norspermidine biosynthesis
AP3564_RS11830	PWY-7153	grixazone biosynthesis
AP3564_RS12045	PWY-6703	preQ<sub>0</sub> biosynthesis
AP3564_RS12055	PWY-6703	preQ<sub>0</sub> biosynthesis
AP3564_RS12065	PWY-6700	queuosine biosynthesis
AP3564_RS12125	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS12125	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS12125	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS12125	PWY-7385	1,3-propanediol biosynthesis (engineered)
AP3564_RS12310	PWY-2941	L-lysine biosynthesis II
AP3564_RS12315	PWY-2941	L-lysine biosynthesis II
AP3564_RS12345	PWY-6899	base-degraded thiamin salvage
AP3564_RS12345	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS12350	PWY-6899	base-degraded thiamin salvage
AP3564_RS12350	PWY-7356	thiamin salvage IV (yeast)
AP3564_RS12395	PWY-5704	urea degradation II
AP3564_RS12400	PWY-5704	urea degradation II
AP3564_RS12405	PWY-5704	urea degradation II
AP3564_RS12465	PWY-2201	folate transformations I
AP3564_RS12465	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS12465	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS12495	PWY-7731	AP3564_RS12495
AP3564_RS12515	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS12515	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AP3564_RS12515	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AP3564_RS12515	PWY-6596	adenosine nucleotides degradation I
AP3564_RS12515	PWY-6606	guanosine nucleotides degradation II
AP3564_RS12515	PWY-6607	guanosine nucleotides degradation I
AP3564_RS12515	PWY-6608	guanosine nucleotides degradation III
AP3564_RS12515	PWY-6999	theophylline degradation
AP3564_RS12535	PWY-5691	urate degradation to allantoin I
AP3564_RS12535	PWY-7394	urate degradation to allantoin II
AP3564_RS12535	PWY-7849	AP3564_RS12535
AP3564_RS12540	PWY-5691	urate degradation to allantoin I
AP3564_RS12540	PWY-7394	urate degradation to allantoin II
AP3564_RS12540	PWY-7849	AP3564_RS12540
AP3564_RS12560	PWY-6832	2-aminoethylphosphonate degradation II
AP3564_RS12565	PWY-5686	UMP biosynthesis
AP3564_RS12565	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AP3564_RS12565	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AP3564_RS12565	PWY-7790	AP3564_RS12565
AP3564_RS12565	PWY-7791	AP3564_RS12565
AP3564_RS12675	PWY-6619	adenine and adenosine salvage VI
AP3564_RS12710	PWY-6610	adenine and adenosine salvage IV
AP3564_RS12740	PWY-4041	&gamma;-glutamyl cycle
AP3564_RS12740	PWY-5826	hypoglycin biosynthesis
AP3564_RS12950	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AP3564_RS12950	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AP3564_RS13030	PWY-723	alkylnitronates degradation
AP3564_RS13045	PWY-723	alkylnitronates degradation
AP3564_RS13055	PWY-2301	<i>myo</i>-inositol biosynthesis
AP3564_RS13055	PWY-4702	phytate degradation I
AP3564_RS13055	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AP3564_RS13105	PWY-5750	itaconate biosynthesis
AP3564_RS13105	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS13105	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AP3564_RS13180	PWY-3841	folate transformations II
AP3564_RS13180	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS13180	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS13180	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS13180	PWY-7199	pyrimidine deoxyribonucleosides salvage
AP3564_RS13180	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS13185	PWY-3841	folate transformations II
AP3564_RS13185	PWY-6614	tetrahydrofolate biosynthesis
AP3564_RS13250	PWY-6825	phosphatidylcholine biosynthesis V
AP3564_RS13280	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AP3564_RS13325	PWY-4202	arsenate detoxification I (glutaredoxin)
AP3564_RS13325	PWY-5532	adenosine nucleotides degradation IV
AP3564_RS13325	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AP3564_RS13325	PWY-6608	guanosine nucleotides degradation III
AP3564_RS13325	PWY-6609	adenine and adenosine salvage III
AP3564_RS13325	PWY-6611	adenine and adenosine salvage V
AP3564_RS13325	PWY-6620	guanine and guanosine salvage
AP3564_RS13325	PWY-6627	salinosporamide A biosynthesis
AP3564_RS13325	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AP3564_RS13325	PWY-7179	purine deoxyribonucleosides degradation I
AP3564_RS13325	PWY-7179-1	purine deoxyribonucleosides degradation
AP3564_RS13415	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AP3564_RS13420	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AP3564_RS13430	PWY-6938	NADH repair
AP3564_RS13435	PWY-6854	ethylene biosynthesis III (microbes)
AP3564_RS13565	PWY-5101	L-isoleucine biosynthesis II
AP3564_RS13565	PWY-5103	L-isoleucine biosynthesis III
AP3564_RS13565	PWY-5104	L-isoleucine biosynthesis IV
AP3564_RS13565	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AP3564_RS13785	PWY-5747	2-methylcitrate cycle II
AP3564_RS13945	PWY-6654	phosphopantothenate biosynthesis III
AP3564_RS13945	PWY-7862	AP3564_RS13945
AP3564_RS14120	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS14120	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS14365	PWY-5350	thiosulfate disproportionation III (rhodanese)
AP3564_RS14505	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AP3564_RS14515	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AP3564_RS14515	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AP3564_RS14515	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AP3564_RS14655	PWY-6679	jadomycin biosynthesis
AP3564_RS14655	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS15015	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS15025	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS15030	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AP3564_RS15030	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AP3564_RS15060	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS15060	PWY-4521	arsenite oxidation I (respiratory)
AP3564_RS15060	PWY-6692	Fe(II) oxidation
AP3564_RS15060	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS15230	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS15230	PWY-5723	Rubisco shunt
AP3564_RS15230	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS15230	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS15230	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS15230	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS15260	PWY-5667	CDP-diacylglycerol biosynthesis I
AP3564_RS15260	PWY-5981	CDP-diacylglycerol biosynthesis III
AP3564_RS15260	PWY-6453	stigma estolide biosynthesis
AP3564_RS15260	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AP3564_RS15260	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AP3564_RS15260	PWY-7587	oleate biosynthesis III (cyanobacteria)
AP3564_RS15260	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AP3564_RS15260	PWY-7782	AP3564_RS15260
AP3564_RS15735	PWY-4041	&gamma;-glutamyl cycle
AP3564_RS15735	PWY-5826	hypoglycin biosynthesis
AP3564_RS15965	PWY-4261	glycerol degradation I
AP3564_RS16195	PWY-381	nitrate reduction II (assimilatory)
AP3564_RS16195	PWY-5675	nitrate reduction V (assimilatory)
AP3564_RS16195	PWY-6549	L-glutamine biosynthesis III
AP3564_RS16195	PWY-6963	ammonia assimilation cycle I
AP3564_RS16195	PWY-6964	ammonia assimilation cycle II
AP3564_RS16230	PWY-2781	<i>cis</i>-zeatin biosynthesis
AP3564_RS16295	PWY-5269	cardiolipin biosynthesis II
AP3564_RS16295	PWY-5668	cardiolipin biosynthesis I
AP3564_RS16295	PWY-7817	AP3564_RS16295
AP3564_RS16365	PWY-2941	L-lysine biosynthesis II
AP3564_RS16365	PWY-2942	L-lysine biosynthesis III
AP3564_RS16365	PWY-5097	L-lysine biosynthesis VI
AP3564_RS16370	PWY-2941	L-lysine biosynthesis II
AP3564_RS16370	PWY-2942	L-lysine biosynthesis III
AP3564_RS16370	PWY-5097	L-lysine biosynthesis VI
AP3564_RS16370	PWY-6559	spermidine biosynthesis II
AP3564_RS16370	PWY-6562	norspermidine biosynthesis
AP3564_RS16370	PWY-7153	grixazone biosynthesis
AP3564_RS16375	PWY-2941	L-lysine biosynthesis II
AP3564_RS16375	PWY-2942	L-lysine biosynthesis III
AP3564_RS16375	PWY-5097	L-lysine biosynthesis VI
AP3564_RS16375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS16375	PWY-6559	spermidine biosynthesis II
AP3564_RS16375	PWY-6562	norspermidine biosynthesis
AP3564_RS16375	PWY-7153	grixazone biosynthesis
AP3564_RS16375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS16415	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AP3564_RS16415	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS16415	PWY-6168	flavin biosynthesis III (fungi)
AP3564_RS16415	PWY-7863	AP3564_RS16415
AP3564_RS16475	PWY-7294	xylose degradation IV
AP3564_RS16475	PWY-7295	L-arabinose degradation IV
AP3564_RS16475	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS16480	PWY-5667	CDP-diacylglycerol biosynthesis I
AP3564_RS16480	PWY-5981	CDP-diacylglycerol biosynthesis III
AP3564_RS16480	PWY-7817	AP3564_RS16480
AP3564_RS16635	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS16705	PWY-5392	reductive TCA cycle II
AP3564_RS16705	PWY-5537	pyruvate fermentation to acetate V
AP3564_RS16705	PWY-5538	pyruvate fermentation to acetate VI
AP3564_RS16705	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS16705	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS16705	PWY-6728	methylaspartate cycle
AP3564_RS16705	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS16705	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AP3564_RS16710	PWY-5392	reductive TCA cycle II
AP3564_RS16710	PWY-5537	pyruvate fermentation to acetate V
AP3564_RS16710	PWY-5538	pyruvate fermentation to acetate VI
AP3564_RS16710	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS16710	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS16710	PWY-6728	methylaspartate cycle
AP3564_RS16710	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS16710	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AP3564_RS16745	PWY-6829	tRNA methylation (yeast)
AP3564_RS16745	PWY-7285	methylwyosine biosynthesis
AP3564_RS16745	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AP3564_RS16805	PWY-5367	petroselinate biosynthesis
AP3564_RS16805	PWY-5515	L-arabinose degradation II
AP3564_RS16805	PWY-5525	D-glucuronate degradation I
AP3564_RS16805	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AP3564_RS16805	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AP3564_RS16805	PWY-5989	stearate biosynthesis II (bacteria and plants)
AP3564_RS16805	PWY-5994	palmitate biosynthesis I (animals and fungi)
AP3564_RS16805	PWY-6113	superpathway of mycolate biosynthesis
AP3564_RS16805	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AP3564_RS16805	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AP3564_RS16805	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS16805	PWY-7663	gondoate biosynthesis (anaerobic)
AP3564_RS16805	PWY-7664	oleate biosynthesis IV (anaerobic)
AP3564_RS16805	PWY-7858	AP3564_RS16805
AP3564_RS16805	PWYG-321	mycolate biosynthesis
AP3564_RS16810	PWY-4381	fatty acid biosynthesis initiation I
AP3564_RS16810	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AP3564_RS16810	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS16850	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS16850	PWY-5723	Rubisco shunt
AP3564_RS16870	PWY-2201	folate transformations I
AP3564_RS16875	PWY-6825	phosphatidylcholine biosynthesis V
AP3564_RS16890	PWY-7851	AP3564_RS16890
AP3564_RS16900	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS16925	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AP3564_RS16930	PWY-5194	siroheme biosynthesis
AP3564_RS16930	PWY-5196	factor 430 biosynthesis
AP3564_RS16930	PWY-5441	S-methyl-L-methionine cycle
AP3564_RS16930	PWY-702	L-methionine biosynthesis II
AP3564_RS16930	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AP3564_RS16940	PWY-6683	sulfate reduction III (assimilatory)
AP3564_RS16945	PWY-5340	sulfate activation for sulfonation
AP3564_RS16950	PWY-5278	sulfite oxidation III
AP3564_RS16950	PWY-5340	sulfate activation for sulfonation
AP3564_RS16950	PWY-6683	sulfate reduction III (assimilatory)
AP3564_RS16950	PWY-6932	selenate reduction
AP3564_RS16960	PWY-5686	UMP biosynthesis
AP3564_RS16960	PWY-7790	AP3564_RS16960
AP3564_RS16960	PWY-7791	AP3564_RS16960
AP3564_RS16965	PWY-5686	UMP biosynthesis
AP3564_RS16965	PWY-7790	AP3564_RS16965
AP3564_RS16965	PWY-7791	AP3564_RS16965
AP3564_RS16980	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS16980	PWY-5686	UMP biosynthesis
AP3564_RS16980	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS16980	PWY-7790	AP3564_RS16980
AP3564_RS16980	PWY-7791	AP3564_RS16980
AP3564_RS16985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS16985	PWY-5686	UMP biosynthesis
AP3564_RS16985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS16985	PWY-7790	AP3564_RS16985
AP3564_RS16985	PWY-7791	AP3564_RS16985
AP3564_RS16990	PWY-5686	UMP biosynthesis
AP3564_RS16990	PWY-7790	AP3564_RS16990
AP3564_RS16990	PWY-7791	AP3564_RS16990
AP3564_RS16995	PWY-5686	UMP biosynthesis
AP3564_RS16995	PWY-7790	AP3564_RS16995
AP3564_RS16995	PWY-7791	AP3564_RS16995
AP3564_RS17005	PWY-7183	pyrimidine nucleobases salvage I
AP3564_RS17050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AP3564_RS17110	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS17110	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS17115	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS17115	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AP3564_RS17115	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AP3564_RS17115	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS17125	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS17125	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS17130	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS17130	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AP3564_RS17130	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS17155	PWY-2201	folate transformations I
AP3564_RS17175	PWY-6654	phosphopantothenate biosynthesis III
AP3564_RS17175	PWY-7862	AP3564_RS17175
AP3564_RS17225	PWY-7851	AP3564_RS17225
AP3564_RS17300	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS17300	PWY-4521	arsenite oxidation I (respiratory)
AP3564_RS17300	PWY-6692	Fe(II) oxidation
AP3564_RS17300	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS17310	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS17310	PWY-4521	arsenite oxidation I (respiratory)
AP3564_RS17310	PWY-6692	Fe(II) oxidation
AP3564_RS17310	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS17340	PWY-6825	phosphatidylcholine biosynthesis V
AP3564_RS17450	PWY-5155	&beta;-alanine biosynthesis III
AP3564_RS17460	PWY-6654	phosphopantothenate biosynthesis III
AP3564_RS17485	PWY-2941	L-lysine biosynthesis II
AP3564_RS17485	PWY-2942	L-lysine biosynthesis III
AP3564_RS17485	PWY-5097	L-lysine biosynthesis VI
AP3564_RS17535	PWY-101	photosynthesis light reactions
AP3564_RS17570	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS17575	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AP3564_RS17610	PWY-5958	acridone alkaloid biosynthesis
AP3564_RS17610	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AP3564_RS17610	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AP3564_RS17615	PWY-3461	L-tyrosine biosynthesis II
AP3564_RS17615	PWY-3462	L-phenylalanine biosynthesis II
AP3564_RS17615	PWY-6120	L-tyrosine biosynthesis III
AP3564_RS17615	PWY-6627	salinosporamide A biosynthesis
AP3564_RS17615	PWY-7626	bacilysin biosynthesis
AP3564_RS17620	PWY-6164	3-dehydroquinate biosynthesis I
AP3564_RS17625	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS17635	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AP3564_RS17635	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AP3564_RS17635	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS17635	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS17635	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AP3564_RS17635	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS17635	PWY-7205	CMP phosphorylation
AP3564_RS17635	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS17635	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS17635	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS17635	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS17635	PWY-7224	purine deoxyribonucleosides salvage
AP3564_RS17635	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS17635	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AP3564_RS17640	PWY-5807	heptaprenyl diphosphate biosynthesis
AP3564_RS17645	PWY-5839	menaquinol-7 biosynthesis
AP3564_RS17645	PWY-5844	menaquinol-9 biosynthesis
AP3564_RS17645	PWY-5849	menaquinol-6 biosynthesis
AP3564_RS17645	PWY-5890	menaquinol-10 biosynthesis
AP3564_RS17645	PWY-5891	menaquinol-11 biosynthesis
AP3564_RS17645	PWY-5892	menaquinol-12 biosynthesis
AP3564_RS17645	PWY-5895	menaquinol-13 biosynthesis
AP3564_RS17650	PWY-5807	heptaprenyl diphosphate biosynthesis
AP3564_RS17660	PWY-5663	tetrahydrobiopterin biosynthesis I
AP3564_RS17660	PWY-5664	tetrahydrobiopterin biosynthesis II
AP3564_RS17660	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AP3564_RS17660	PWY-6703	preQ<sub>0</sub> biosynthesis
AP3564_RS17660	PWY-6983	tetrahydrobiopterin biosynthesis III
AP3564_RS17660	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AP3564_RS17660	PWY-7852	AP3564_RS17660
AP3564_RS17695	PWY-5667	CDP-diacylglycerol biosynthesis I
AP3564_RS17695	PWY-5981	CDP-diacylglycerol biosynthesis III
AP3564_RS17730	PWY-7205	CMP phosphorylation
AP3564_RS17815	PWY-7805	AP3564_RS17815
AP3564_RS17815	PWY-7807	AP3564_RS17815
AP3564_RS17835	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AP3564_RS17835	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AP3564_RS17835	PWY-6268	adenosylcobalamin salvage from cobalamin
AP3564_RS17835	PWY-6269	adenosylcobalamin salvage from cobinamide II
AP3564_RS17880	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS17880	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS17905	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS17905	PWY-6168	flavin biosynthesis III (fungi)
AP3564_RS17910	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS17910	PWY-6168	flavin biosynthesis III (fungi)
AP3564_RS17910	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AP3564_RS17915	PWY-6167	flavin biosynthesis II (archaea)
AP3564_RS17915	PWY-6168	flavin biosynthesis III (fungi)
AP3564_RS17915	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AP3564_RS17920	PWY-5525	D-glucuronate degradation I
AP3564_RS17940	PWY-2941	L-lysine biosynthesis II
AP3564_RS17940	PWY-2942	L-lysine biosynthesis III
AP3564_RS17940	PWY-5097	L-lysine biosynthesis VI
AP3564_RS17985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AP3564_RS17985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AP3564_RS17990	PWY-7181	pyrimidine deoxyribonucleosides degradation
AP3564_RS17995	PWY-4202	arsenate detoxification I (glutaredoxin)
AP3564_RS17995	PWY-5532	adenosine nucleotides degradation IV
AP3564_RS17995	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AP3564_RS17995	PWY-6608	guanosine nucleotides degradation III
AP3564_RS17995	PWY-6609	adenine and adenosine salvage III
AP3564_RS17995	PWY-6611	adenine and adenosine salvage V
AP3564_RS17995	PWY-6620	guanine and guanosine salvage
AP3564_RS17995	PWY-6627	salinosporamide A biosynthesis
AP3564_RS17995	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AP3564_RS17995	PWY-7179	purine deoxyribonucleosides degradation I
AP3564_RS17995	PWY-7179-1	purine deoxyribonucleosides degradation
AP3564_RS18000	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS18110	PWY-3341	L-proline biosynthesis III
AP3564_RS18110	PWY-4981	L-proline biosynthesis II (from arginine)
AP3564_RS18110	PWY-6344	L-ornithine degradation II (Stickland reaction)
AP3564_RS18130	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AP3564_RS18240	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AP3564_RS18240	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AP3564_RS18275	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS18275	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS18275	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS18300	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AP3564_RS18300	PWY-2201	folate transformations I
AP3564_RS18300	PWY-3841	folate transformations II
AP3564_RS18300	PWY-5030	L-histidine degradation III
AP3564_RS18300	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS18300	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AP3564_RS18370	PWY-7799	AP3564_RS18370
AP3564_RS18370	PWY-7800	AP3564_RS18370
AP3564_RS18375	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS18375	PWY-6416	quinate degradation II
AP3564_RS18375	PWY-6707	gallate biosynthesis
AP3564_RS18460	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AP3564_RS18460	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS18460	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AP3564_RS18460	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS18460	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS18460	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AP3564_RS18460	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AP3564_RS18460	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AP3564_RS18465	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AP3564_RS18465	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AP3564_RS18580	PWY-2722	trehalose degradation IV
AP3564_RS18580	PWY-2723	trehalose degradation V
AP3564_RS18580	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AP3564_RS18580	PWY-5661	GDP-glucose biosynthesis
AP3564_RS18580	PWY-621	sucrose degradation III (sucrose invertase)
AP3564_RS18580	PWY-7238	sucrose biosynthesis II
AP3564_RS18580	PWY-7385	1,3-propanediol biosynthesis (engineered)
AP3564_RS18650	PWY-6854	ethylene biosynthesis III (microbes)
AP3564_RS18745	PWY-7560	methylerythritol phosphate pathway II
AP3564_RS18815	PWY-6556	pyrimidine ribonucleosides salvage II
AP3564_RS18815	PWY-7181	pyrimidine deoxyribonucleosides degradation
AP3564_RS18815	PWY-7193	pyrimidine ribonucleosides salvage I
AP3564_RS18815	PWY-7199	pyrimidine deoxyribonucleosides salvage
AP3564_RS18820	PWY-7039	phosphatidate metabolism, as a signaling molecule
AP3564_RS18820	PWY-7817	AP3564_RS18820
AP3564_RS18865	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AP3564_RS18895	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AP3564_RS18905	PWY-2201	folate transformations I
AP3564_RS18980	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AP3564_RS18990	PWY-3341	L-proline biosynthesis III
AP3564_RS18990	PWY-4981	L-proline biosynthesis II (from arginine)
AP3564_RS18990	PWY-6344	L-ornithine degradation II (Stickland reaction)
AP3564_RS19010	PWY-5381	pyridine nucleotide cycling (plants)
AP3564_RS19010	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AP3564_RS19010	PWY-7761	AP3564_RS19010
AP3564_RS19020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AP3564_RS19050	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AP3564_RS19050	PWY-6153	autoinducer AI-2 biosynthesis I
AP3564_RS19050	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AP3564_RS19135	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS19135	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS19135	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS19135	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AP3564_RS19185	PWY-6605	adenine and adenosine salvage II
AP3564_RS19185	PWY-6610	adenine and adenosine salvage IV
AP3564_RS19185	PWY-7805	AP3564_RS19185
AP3564_RS19185	PWY-7807	AP3564_RS19185
AP3564_RS19190	PWY-7805	AP3564_RS19190
AP3564_RS19190	PWY-7807	AP3564_RS19190
AP3564_RS19220	PWY-6700	queuosine biosynthesis
AP3564_RS19225	PWY-6700	queuosine biosynthesis
AP3564_RS19275	PWY-5316	nicotine biosynthesis
AP3564_RS19275	PWY-7342	superpathway of nicotine biosynthesis
AP3564_RS19280	PWY-5316	nicotine biosynthesis
AP3564_RS19280	PWY-5381	pyridine nucleotide cycling (plants)
AP3564_RS19280	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AP3564_RS19280	PWY-7342	superpathway of nicotine biosynthesis
AP3564_RS19290	PWY-5316	nicotine biosynthesis
AP3564_RS19290	PWY-7342	superpathway of nicotine biosynthesis
AP3564_RS19295	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS19295	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS19295	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS19295	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AP3564_RS19305	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AP3564_RS19410	PWY-2161	folate polyglutamylation
AP3564_RS19435	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS19440	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS19440	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AP3564_RS19445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS19445	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AP3564_RS19450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS19450	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AP3564_RS19460	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AP3564_RS19525	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AP3564_RS19530	PWY-6871	3-methylbutanol biosynthesis
AP3564_RS19535	PWY-5103	L-isoleucine biosynthesis III
AP3564_RS19535	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AP3564_RS19540	PWY-5101	L-isoleucine biosynthesis II
AP3564_RS19540	PWY-5103	L-isoleucine biosynthesis III
AP3564_RS19540	PWY-5104	L-isoleucine biosynthesis IV
AP3564_RS19540	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AP3564_RS19540	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AP3564_RS19540	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AP3564_RS19540	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AP3564_RS19545	PWY-5101	L-isoleucine biosynthesis II
AP3564_RS19545	PWY-5103	L-isoleucine biosynthesis III
AP3564_RS19545	PWY-5104	L-isoleucine biosynthesis IV
AP3564_RS19545	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AP3564_RS19545	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AP3564_RS19545	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AP3564_RS19545	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AP3564_RS19580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AP3564_RS19580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AP3564_RS19595	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS19595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AP3564_RS19595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS19595	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS19595	PWY-6728	methylaspartate cycle
AP3564_RS19595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS19595	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS19595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS19600	PWY-3781	aerobic respiration I (cytochrome c)
AP3564_RS19600	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AP3564_RS19600	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS19600	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS19600	PWY-6728	methylaspartate cycle
AP3564_RS19600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS19600	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS19600	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AP3564_RS19745	PWY-3961	phosphopantothenate biosynthesis II
AP3564_RS19795	PWY-6834	spermidine biosynthesis III
AP3564_RS19800	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS19800	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS19800	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS19800	PWY-7003	glycerol degradation to butanol
AP3564_RS19805	PWY-7851	AP3564_RS19805
AP3564_RS19845	PWY-1622	formaldehyde assimilation I (serine pathway)
AP3564_RS19845	PWY-5392	reductive TCA cycle II
AP3564_RS19845	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AP3564_RS19845	PWY-5690	TCA cycle II (plants and fungi)
AP3564_RS19845	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS19845	PWY-6728	methylaspartate cycle
AP3564_RS19845	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS19845	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AP3564_RS19845	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AP3564_RS19850	PWY-5913	TCA cycle VI (obligate autotrophs)
AP3564_RS19850	PWY-6549	L-glutamine biosynthesis III
AP3564_RS19850	PWY-6728	methylaspartate cycle
AP3564_RS19850	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AP3564_RS19850	PWY-7124	ethylene biosynthesis V (engineered)
AP3564_RS19850	PWY-7254	TCA cycle VII (acetate-producers)
AP3564_RS19850	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AP3564_RS19865	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS19865	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AP3564_RS19865	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS19865	PWY-5723	Rubisco shunt
AP3564_RS19865	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AP3564_RS19865	PWY-6886	1-butanol autotrophic biosynthesis
AP3564_RS19865	PWY-6901	superpathway of glucose and xylose degradation
AP3564_RS19865	PWY-7003	glycerol degradation to butanol
AP3564_RS19865	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AP3564_RS19865	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AP3564_RS19870	PWY-1042	glycolysis IV (plant cytosol)
AP3564_RS19870	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AP3564_RS19870	PWY-5484	glycolysis II (from fructose 6-phosphate)
AP3564_RS19870	PWY-7385	1,3-propanediol biosynthesis (engineered)
AP3564_RS19880	PWY-6679	jadomycin biosynthesis
AP3564_RS19880	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS19885	PWY-6679	jadomycin biosynthesis
AP3564_RS19885	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AP3564_RS19910	PWY-7805	AP3564_RS19910
AP3564_RS19910	PWY-7807	AP3564_RS19910
AP3564_RS19920	PWY-1281	sulfoacetaldehyde degradation I
AP3564_RS19920	PWY-5482	pyruvate fermentation to acetate II
AP3564_RS19920	PWY-5485	pyruvate fermentation to acetate IV
AP3564_RS19920	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS19920	PWY-6637	sulfolactate degradation II
AP3564_RS19935	PWY-4983	L-citrulline-nitric oxide cycle
AP3564_RS19935	PWY-4984	urea cycle
AP3564_RS19935	PWY-5	canavanine biosynthesis
AP3564_RS19935	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS19935	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS19940	PWY-4983	L-citrulline-nitric oxide cycle
AP3564_RS19940	PWY-4984	urea cycle
AP3564_RS19940	PWY-5	canavanine biosynthesis
AP3564_RS19940	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AP3564_RS19940	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AP3564_RS19960	PWY-5482	pyruvate fermentation to acetate II
AP3564_RS19960	PWY-5485	pyruvate fermentation to acetate IV
AP3564_RS19960	PWY-5497	purine nucleobases degradation II (anaerobic)
AP3564_RS19995	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AP3564_RS19995	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AP3564_RS19995	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AP3564_RS20010	PWY-6823	molybdenum cofactor biosynthesis
AP3564_RS20010	PWY-6891	thiazole biosynthesis II (Bacillus)
AP3564_RS20010	PWY-6892	thiazole biosynthesis I (E. coli)
AP3564_RS20010	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AP3564_RS20130	PWY-4261	glycerol degradation I
