APT62_RS00010	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00015	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00065	SM00434	DNA Topoisomerase IV
APT62_RS00070	SM00387	Histidine kinase-like ATPases
APT62_RS00070	SM00433	TopoisomeraseII
APT62_RS00085	SM00480	DNA polymerase III beta subunit
APT62_RS00090	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00090	SM00760	Bacterial dnaA protein helix-turn-helix domain
APT62_RS00110	SM00393	Putative single-stranded nucleic acids-binding domain
APT62_RS00110	SM01245	APT62_RS00110
APT62_RS00120	SM01350	APT62_RS00120
APT62_RS00155	SM01228	APT62_RS00155
APT62_RS00175	SM00470	ParB-like nuclease domain
APT62_RS00205	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS00205	SM01240	APT62_RS00205
APT62_RS00210	SM00448	cheY-homologous receiver domain
APT62_RS00210	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS00215	SM00387	Histidine kinase-like ATPases
APT62_RS00215	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS00395	SM01234	APT62_RS00395
APT62_RS00400	SM00422	helix_turn_helix, mercury resistance
APT62_RS00445	SM00530	Helix-turn-helix XRE-family like proteins 
APT62_RS00495	SM00257	Lysin motif
APT62_RS00590	SM00642	Alpha-amylase domain
APT62_RS00600	SM00861	Transketolase, pyrimidine binding domain
APT62_RS00625	SM00946	Prolyl-tRNA synthetase, C-terminal
APT62_RS00635	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00660	SM01061	CAT RNA binding domain
APT62_RS00785	SM00642	Alpha-amylase domain
APT62_RS00810	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00835	SM00354	helix_turn _helix lactose operon repressor
APT62_RS00905	SM01329	APT62_RS00905
APT62_RS00915	SM00382	ATPases associated with a variety of cellular activities
APT62_RS00915	SM01086	C-terminal, D2-small domain, of ClpB protein
APT62_RS00935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS00935	SM00866	APT62_RS00935
APT62_RS00940	SM00642	Alpha-amylase domain
APT62_RS01010	SM00487	DEAD-like helicases superfamily
APT62_RS01010	SM00490	helicase superfamily c-terminal domain
APT62_RS01020	SM00829	Enoylreductase
APT62_RS01030	SM00849	Metallo-beta-lactamase superfamily
APT62_RS01050	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01055	SM00881	CoA binding domain
APT62_RS01065	SM00883	Chaperonin 10 Kd subunit
APT62_RS01085	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS01100	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS01130	SM00487	DEAD-like helicases superfamily
APT62_RS01130	SM00490	helicase superfamily c-terminal domain
APT62_RS01165	SM00487	DEAD-like helicases superfamily
APT62_RS01165	SM00490	helicase superfamily c-terminal domain
APT62_RS01180	SM00957	SecA DEAD-like domain
APT62_RS01180	SM00958	SecA preprotein cross-linking domain
APT62_RS01185	SM00937	APT62_RS01185
APT62_RS01190	SM00448	cheY-homologous receiver domain
APT62_RS01190	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS01195	SM00387	Histidine kinase-like ATPases
APT62_RS01195	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS01215	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01310	SM00448	cheY-homologous receiver domain
APT62_RS01310	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS01315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APT62_RS01315	SM00387	Histidine kinase-like ATPases
APT62_RS01315	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS01340	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01390	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01395	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01400	SM00047	Lysozyme subfamily 2
APT62_RS01405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS01415	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APT62_RS01415	SM00292	breast cancer carboxy-terminal domain
APT62_RS01415	SM00532	Ligase N family
APT62_RS01435	SM00845	GatB domain
APT62_RS01445	SM00354	helix_turn _helix lactose operon repressor
APT62_RS01465	SM00640	Glycosyl hydrolases family 32
APT62_RS01470	SM00382	ATPases associated with a variety of cellular activities
APT62_RS01480	SM00845	GatB domain
APT62_RS01485	SM00831	Cation transporter/ATPase, N-terminus
APT62_RS01535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS01635	SM00966	SpoVT / AbrB like domain 
APT62_RS01660	SM00855	Phosphoglycerate mutase family
APT62_RS01670	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS01755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS01755	SM00866	APT62_RS01755
APT62_RS01815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APT62_RS01825	SM01060	APT62_RS01825
APT62_RS01850	SM00420	helix_turn_helix, Deoxyribose operon repressor
APT62_RS01850	SM01134	APT62_RS01850
APT62_RS01870	SM01133	APT62_RS01870
APT62_RS01885	SM01266	APT62_RS01885
APT62_RS01905	SM00450	Rhodanese Homology Domain
APT62_RS01955	SM00855	Phosphoglycerate mutase family
APT62_RS01985	SM00506	Appr-1"-p processing enzyme
APT62_RS02015	SM01217	APT62_RS02015
APT62_RS02030	SM00257	Lysin motif
APT62_RS02035	SM00448	cheY-homologous receiver domain
APT62_RS02035	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS02040	SM00091	PAS domain
APT62_RS02040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APT62_RS02040	SM00387	Histidine kinase-like ATPases
APT62_RS02040	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS02060	SM00849	Metallo-beta-lactamase superfamily
APT62_RS02065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APT62_RS02085	SM00849	Metallo-beta-lactamase superfamily
APT62_RS02105	SM00344	helix_turn_helix ASNC type
APT62_RS02145	SM01230	APT62_RS02145
APT62_RS02175	SM00363	S4 RNA-binding domain
APT62_RS02195	SM00493	APT62_RS02195
APT62_RS02200	SM00650	Ribosomal RNA adenine dimethylases
APT62_RS02220	SM00382	ATPases associated with a variety of cellular activities
APT62_RS02245	SM00984	UDP binding domain
APT62_RS02280	SM00984	UDP binding domain
APT62_RS02310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS02335	SM01240	APT62_RS02335
APT62_RS02400	SM00870	APT62_RS02400
APT62_RS02435	SM00382	ATPases associated with a variety of cellular activities
APT62_RS02440	SM00450	Rhodanese Homology Domain
APT62_RS02450	SM00382	ATPases associated with a variety of cellular activities
APT62_RS02465	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS02475	SM00998	Adenylosuccinate lyase C-terminus
APT62_RS02480	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS02485	SM01130	APT62_RS02485
APT62_RS02490	SM01005	Alanine racemase, C-terminal domain
APT62_RS02515	SM00382	ATPases associated with a variety of cellular activities
APT62_RS02520	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS02520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
APT62_RS02625	SM00861	Transketolase, pyrimidine binding domain
APT62_RS02645	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS02675	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS02695	SM00838	Elongation factor G C-terminus
APT62_RS02715	SM00878	Biotin carboxylase C-terminal domain
APT62_RS02745	SM00100	Cyclic nucleotide-monophosphate binding domain
APT62_RS02745	SM00419	helix_turn_helix, cAMP Regulatory protein
APT62_RS02775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APT62_RS02780	SM00849	Metallo-beta-lactamase superfamily
APT62_RS02795	SM00487	DEAD-like helicases superfamily
APT62_RS02795	SM00490	helicase superfamily c-terminal domain
APT62_RS02800	SM00014	Acid phosphatase homologues
APT62_RS02805	SM01387	APT62_RS02805
APT62_RS02810	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS02810	SM00322	K homology RNA-binding domain
APT62_RS02815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APT62_RS02820	SM00849	Metallo-beta-lactamase superfamily
APT62_RS02830	SM00155	Phospholipase D. Active site motifs.
APT62_RS02840	SM00072	Guanylate kinase homologues.
APT62_RS02845	SM01409	APT62_RS02845
APT62_RS02855	SM00487	DEAD-like helicases superfamily
APT62_RS02855	SM00490	helicase superfamily c-terminal domain
APT62_RS02870	SM00331	Sigma factor PP2C-like phosphatases
APT62_RS02870	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
APT62_RS02875	SM00220	Serine/Threonine protein kinases, catalytic domain
APT62_RS02875	SM00740	APT62_RS02875
APT62_RS02890	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
APT62_RS02905	SM01120	APT62_RS02905
APT62_RS02905	SM01121	APT62_RS02905
APT62_RS02930	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03100	SM00858	APT62_RS03100
APT62_RS03220	SM00487	DEAD-like helicases superfamily
APT62_RS03220	SM00490	helicase superfamily c-terminal domain
APT62_RS03230	SM00823	Phosphopantetheine attachment site
APT62_RS03235	SM00358	Double-stranded RNA binding motif
APT62_RS03235	SM00535	Ribonuclease III family
APT62_RS03240	SM00968	SMC proteins Flexible Hinge Domain
APT62_RS03250	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03250	SM00962	SRP54-type protein, GTPase domain
APT62_RS03250	SM00963	SRP54-type protein, helical bundle domain
APT62_RS03280	SM00831	Cation transporter/ATPase, N-terminus
APT62_RS03290	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03290	SM00962	SRP54-type protein, GTPase domain
APT62_RS03290	SM00963	SRP54-type protein, helical bundle domain
APT62_RS03340	SM00487	DEAD-like helicases superfamily
APT62_RS03340	SM00490	helicase superfamily c-terminal domain
APT62_RS03365	SM01101	APT62_RS03365
APT62_RS03405	SM00422	helix_turn_helix, mercury resistance
APT62_RS03445	SM01350	APT62_RS03445
APT62_RS03475	SM01211	APT62_RS03475
APT62_RS03480	SM01001	AIR carboxylase
APT62_RS03500	SM00798	AICARFT/IMPCHase bienzyme
APT62_RS03500	SM00851	MGS-like domain
APT62_RS03505	SM01209	APT62_RS03505
APT62_RS03505	SM01210	APT62_RS03505
APT62_RS03510	SM00347	helix_turn_helix multiple antibiotic resistance protein
APT62_RS03515	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03520	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03525	SM01234	APT62_RS03525
APT62_RS03530	SM00450	Rhodanese Homology Domain
APT62_RS03535	SM00450	Rhodanese Homology Domain
APT62_RS03540	SM00450	Rhodanese Homology Domain
APT62_RS03560	SM00422	helix_turn_helix, mercury resistance
APT62_RS03595	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03595	SM01086	C-terminal, D2-small domain, of ClpB protein
APT62_RS03625	SM01323	APT62_RS03625
APT62_RS03635	SM00529	Helix-turn-helix diphteria tox regulatory element
APT62_RS03645	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS03665	SM00487	DEAD-like helicases superfamily
APT62_RS03665	SM00490	helicase superfamily c-terminal domain
APT62_RS03710	SM00450	Rhodanese Homology Domain
APT62_RS03740	SM00357	Cold shock protein domain
APT62_RS03755	SM00047	Lysozyme subfamily 2
APT62_RS03755	SM00257	Lysin motif
APT62_RS03790	SM00363	S4 RNA-binding domain
APT62_RS03800	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APT62_RS03820	SM00873	B3/4 domain
APT62_RS03820	SM00874	tRNA synthetase B5 domain
APT62_RS03820	SM00896	Ferredoxin-fold anticodon binding domain
APT62_RS03855	SM00382	ATPases associated with a variety of cellular activities
APT62_RS03990	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04040	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS04040	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
APT62_RS04060	SM00292	breast cancer carboxy-terminal domain
APT62_RS04060	SM00479	APT62_RS04060
APT62_RS04100	SM00880	APT62_RS04100
APT62_RS04105	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04110	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS04125	SM00463	Small MutS-related domain
APT62_RS04125	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
APT62_RS04125	SM00534	ATPase domain of DNA mismatch repair MUTS family
APT62_RS04135	SM00851	MGS-like domain
APT62_RS04170	SM00354	helix_turn _helix lactose operon repressor
APT62_RS04175	SM00854	Bacterial capsule synthesis protein PGA_cap
APT62_RS04210	SM00046	Diacylglycerol kinase catalytic domain (presumed)
APT62_RS04305	SM00841	Elongation factor P, C-terminal
APT62_RS04305	SM01185	APT62_RS04305
APT62_RS04390	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04410	SM00836	DALR anticodon binding domain
APT62_RS04410	SM01016	Arginyl tRNA synthetase N terminal dom
APT62_RS04445	SM00831	Cation transporter/ATPase, N-terminus
APT62_RS04450	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS04450	SM00732	Likely ribonuclease with RNase H fold.
APT62_RS04460	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS04490	SM00642	Alpha-amylase domain
APT62_RS04530	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04545	SM00903	Flavin reductase like domain
APT62_RS04560	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04565	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04590	SM00937	APT62_RS04590
APT62_RS04625	SM00904	Riboflavin kinase
APT62_RS04650	SM00271	DnaJ molecular chaperone homology domain
APT62_RS04660	SM00838	Elongation factor G C-terminus
APT62_RS04685	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04695	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04720	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APT62_RS04720	SM00245	tail specific protease
APT62_RS04745	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
APT62_RS04745	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
APT62_RS04745	SM00493	APT62_RS04745
APT62_RS04755	SM01207	APT62_RS04755
APT62_RS04760	SM00387	Histidine kinase-like ATPases
APT62_RS04760	SM00433	TopoisomeraseII
APT62_RS04765	SM00434	DNA Topoisomerase IV
APT62_RS04780	SM01131	APT62_RS04780
APT62_RS04855	SM00830	Chorismate mutase type II
APT62_RS04875	SM00354	helix_turn _helix lactose operon repressor
APT62_RS04880	SM00642	Alpha-amylase domain
APT62_RS04885	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04890	SM00642	Alpha-amylase domain
APT62_RS04915	SM00342	helix_turn_helix, arabinose operon control protein
APT62_RS04925	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04940	SM00998	Adenylosuccinate lyase C-terminus
APT62_RS04950	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS04955	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS04960	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS04965	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04970	SM00382	ATPases associated with a variety of cellular activities
APT62_RS04985	SM00420	helix_turn_helix, Deoxyribose operon repressor
APT62_RS04985	SM01134	APT62_RS04985
APT62_RS05000	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
APT62_RS05015	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05035	SM00046	Diacylglycerol kinase catalytic domain (presumed)
APT62_RS05185	SM00287	Bacterial SH3 domain homologues
APT62_RS05185	SM00646	APT62_RS05185
APT62_RS05195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS05195	SM00954	Region found in RelA / SpoT proteins
APT62_RS05225	SM00981	APT62_RS05225
APT62_RS05250	SM00878	Biotin carboxylase C-terminal domain
APT62_RS05265	SM00825	Beta-ketoacyl synthase
APT62_RS05270	SM00822	APT62_RS05270
APT62_RS05275	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
APT62_RS05335	SM00855	Phosphoglycerate mutase family
APT62_RS05350	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS05350	SM00955	APT62_RS05350
APT62_RS05365	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05370	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05400	SM01192	APT62_RS05400
APT62_RS05400	SM01193	APT62_RS05400
APT62_RS05420	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APT62_RS05450	SM00257	Lysin motif
APT62_RS05475	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS05485	SM00938	Nitrogen regulatory protein P-II
APT62_RS05495	SM00479	APT62_RS05495
APT62_RS05495	SM00481	DNA polymerase alpha chain like domain
APT62_RS05500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APT62_RS05530	SM00448	cheY-homologous receiver domain
APT62_RS05530	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS05535	SM00387	Histidine kinase-like ATPases
APT62_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS05560	SM00487	DEAD-like helicases superfamily
APT62_RS05560	SM00490	helicase superfamily c-terminal domain
APT62_RS05570	SM00563	Phosphate acyltransferases
APT62_RS05575	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05580	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05590	SM00363	S4 RNA-binding domain
APT62_RS05650	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APT62_RS05680	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APT62_RS05700	SM00400	zinc finger
APT62_RS05700	SM00493	APT62_RS05700
APT62_RS05710	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05710	SM00994	ClpX C4-type zinc finger
APT62_RS05710	SM01086	C-terminal, D2-small domain, of ClpB protein
APT62_RS05765	SM00986	Uracil DNA glycosylase superfamily
APT62_RS05765	SM00987	UreE urease accessory protein, C-terminal domain 
APT62_RS05785	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05790	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05795	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05820	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05870	SM00849	Metallo-beta-lactamase superfamily
APT62_RS05875	SM00421	helix_turn_helix, Lux Regulon
APT62_RS05875	SM00448	cheY-homologous receiver domain
APT62_RS05880	SM00387	Histidine kinase-like ATPases
APT62_RS05920	SM00732	Likely ribonuclease with RNase H fold.
APT62_RS05930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APT62_RS05935	SM00382	ATPases associated with a variety of cellular activities
APT62_RS05960	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06070	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06225	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS06265	SM00347	helix_turn_helix multiple antibiotic resistance protein
APT62_RS06270	SM00478	endonuclease III
APT62_RS06290	SM00479	APT62_RS06290
APT62_RS06290	SM00491	APT62_RS06290
APT62_RS06305	SM00028	Tetratricopeptide repeats
APT62_RS06315	SM00354	helix_turn _helix lactose operon repressor
APT62_RS06320	SM00640	Glycosyl hydrolases family 32
APT62_RS06330	SM00411	bacterial (prokaryotic) histone like domain
APT62_RS06340	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS06350	SM00257	Lysin motif
APT62_RS06355	SM00487	DEAD-like helicases superfamily
APT62_RS06355	SM00490	helicase superfamily c-terminal domain
APT62_RS06370	SM00363	S4 RNA-binding domain
APT62_RS06395	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06435	SM00481	DNA polymerase alpha chain like domain
APT62_RS06445	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APT62_RS06460	SM00853	MutL C terminal dimerisation domain
APT62_RS06460	SM01340	APT62_RS06460
APT62_RS06465	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
APT62_RS06465	SM00534	ATPase domain of DNA mismatch repair MUTS family
APT62_RS06515	SM00322	K homology RNA-binding domain
APT62_RS06515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS06520	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06525	SM00852	Probable molybdopterin binding domain
APT62_RS06535	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06535	SM00843	APT62_RS06535
APT62_RS06570	SM00387	Histidine kinase-like ATPases
APT62_RS06570	SM00388	His Kinase A (phosphoacceptor) domain
APT62_RS06575	SM00448	cheY-homologous receiver domain
APT62_RS06575	SM00862	Transcriptional regulatory protein, C terminal
APT62_RS06580	SM01350	APT62_RS06580
APT62_RS06595	SM00981	APT62_RS06595
APT62_RS06610	SM00363	S4 RNA-binding domain
APT62_RS06610	SM01390	APT62_RS06610
APT62_RS06645	SM00357	Cold shock protein domain
APT62_RS06680	SM00864	Tubulin/FtsZ family, GTPase domain
APT62_RS06680	SM00865	Tubulin/FtsZ family, C-terminal domain
APT62_RS06685	SM00842	Cell division protein FtsA
APT62_RS06710	SM00740	APT62_RS06710
APT62_RS06760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS06770	SM01103	APT62_RS06770
APT62_RS06820	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06820	SM01086	C-terminal, D2-small domain, of ClpB protein
APT62_RS06855	SM00562	APT62_RS06855
APT62_RS06870	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS06870	SM00924	MgtE intracellular N domain
APT62_RS06890	SM00954	Region found in RelA / SpoT proteins
APT62_RS06895	SM01118	APT62_RS06895
APT62_RS06955	SM00382	ATPases associated with a variety of cellular activities
APT62_RS06955	SM00930	APT62_RS06955
APT62_RS06995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APT62_RS07035	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
APT62_RS07035	SM01232	APT62_RS07035
APT62_RS07040	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
APT62_RS07040	SM00474	3'-5' exonuclease
APT62_RS07040	SM00475	5'-3' exonuclease
APT62_RS07040	SM00482	DNA polymerase A domain
APT62_RS07055	SM00855	Phosphoglycerate mutase family
APT62_RS07100	SM00905	Dihydroneopterin aldolase
APT62_RS07130	SM00986	Uracil DNA glycosylase superfamily
APT62_RS07130	SM00987	UreE urease accessory protein, C-terminal domain 
APT62_RS07150	SM00098	Alkaline phosphatase homologues
APT62_RS07200	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS07295	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
APT62_RS07295	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
APT62_RS07300	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07310	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS07315	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS07320	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS07350	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07395	SM01061	CAT RNA binding domain
APT62_RS07430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS07430	SM00866	APT62_RS07430
APT62_RS07440	SM00855	Phosphoglycerate mutase family
APT62_RS07475	SM00850	LytTr DNA-binding domain
APT62_RS07585	SM00642	Alpha-amylase domain
APT62_RS07600	SM00478	endonuclease III
APT62_RS07620	SM00530	Helix-turn-helix XRE-family like proteins 
APT62_RS07625	SM00257	Lysin motif
APT62_RS07650	SM00919	Malic enzyme, NAD binding domain
APT62_RS07650	SM01274	APT62_RS07650
APT62_RS07665	SM00448	cheY-homologous receiver domain
APT62_RS07675	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS07685	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07755	SM00849	Metallo-beta-lactamase superfamily
APT62_RS07790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS07790	SM00866	APT62_RS07790
APT62_RS07855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APT62_RS07860	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07875	SM00382	ATPases associated with a variety of cellular activities
APT62_RS07880	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08005	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08045	SM00478	endonuclease III
APT62_RS08130	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08135	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08155	SM00662	RNA polymerases D
APT62_RS08170	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS08225	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APT62_RS08230	SM01374	APT62_RS08230
APT62_RS08250	SM00322	K homology RNA-binding domain
APT62_RS08265	SM01382	APT62_RS08265
APT62_RS08265	SM01383	APT62_RS08265
APT62_RS08285	SM01403	APT62_RS08285
APT62_RS08305	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08320	SM00838	Elongation factor G C-terminus
APT62_RS08320	SM00889	Elongation factor G, domain IV
APT62_RS08340	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APT62_RS08355	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08365	SM00977	TilS substrate C-terminal domain
APT62_RS08370	SM00316	Ribosomal protein S1-like RNA-binding domain
APT62_RS08380	SM00363	S4 RNA-binding domain
APT62_RS08390	SM00487	DEAD-like helicases superfamily
APT62_RS08390	SM00490	helicase superfamily c-terminal domain
APT62_RS08390	SM00982	APT62_RS08390
APT62_RS08390	SM01058	CarD-like/TRCF domain
APT62_RS08410	SM01400	APT62_RS08410
APT62_RS08420	SM00487	DEAD-like helicases superfamily
APT62_RS08420	SM00490	helicase superfamily c-terminal domain
APT62_RS08430	SM00465	GIY-YIG type nucleases (URI domain)
APT62_RS08465	SM00947	Carbonic anhydrase
APT62_RS08525	SM01091	Transporter associated domain
APT62_RS08540	SM00849	Metallo-beta-lactamase superfamily
APT62_RS08570	SM00116	Domain in cystathionine beta-synthase and other proteins.
APT62_RS08570	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08580	SM00487	DEAD-like helicases superfamily
APT62_RS08580	SM00490	helicase superfamily c-terminal domain
APT62_RS08635	SM00357	Cold shock protein domain
APT62_RS08635	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08635	SM00959	Rho termination factor, N-terminal domain
APT62_RS08680	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
APT62_RS08730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS08745	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08825	SM00900	APT62_RS08825
APT62_RS08830	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08845	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08850	SM00530	Helix-turn-helix XRE-family like proteins 
APT62_RS08865	SM00493	APT62_RS08865
APT62_RS08875	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08890	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08940	SM00663	RNA polymerase I subunit A N-terminus
APT62_RS08970	SM00382	ATPases associated with a variety of cellular activities
APT62_RS08990	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09000	SM00062	Bacterial periplasmic substrate-binding proteins
APT62_RS09035	SM00649	Ribosomal protein L11/L12
APT62_RS09050	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
APT62_RS09080	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APT62_RS09085	SM00535	Ribonuclease III family
APT62_RS09090	SM00840	APT62_RS09090
APT62_RS09100	SM00927	DNA mismatch repair enzyme MutH
APT62_RS09125	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09155	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09205	SM00670	Large family of predicted nucleotide-binding domains
APT62_RS09210	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09220	SM00642	Alpha-amylase domain
APT62_RS09235	SM01264	APT62_RS09235
APT62_RS09250	SM00530	Helix-turn-helix XRE-family like proteins 
APT62_RS09270	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09325	SM00422	helix_turn_helix, mercury resistance
APT62_RS09350	SM01120	APT62_RS09350
APT62_RS09390	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APT62_RS09470	SM00382	ATPases associated with a variety of cellular activities
APT62_RS09495	SM00788	Adenylosuccinate synthetase
