Aeryth_RS00005	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
Aeryth_RS00010	SM00480	DNA polymerase III beta subunit
Aeryth_RS00015	SM01350	Aeryth_RS00015
Aeryth_RS00030	SM00014	Acid phosphatase homologues
Aeryth_RS00035	SM00387	Histidine kinase-like ATPases
Aeryth_RS00035	SM00433	TopoisomeraseII
Aeryth_RS00040	SM00434	DNA Topoisomerase IV
Aeryth_RS00085	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00100	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS00100	SM00448	cheY-homologous receiver domain
Aeryth_RS00110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS00145	SM00829	Enoylreductase
Aeryth_RS00150	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS00185	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS00200	SM00387	Histidine kinase-like ATPases
Aeryth_RS00205	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS00205	SM00448	cheY-homologous receiver domain
Aeryth_RS00355	SM00878	Biotin carboxylase C-terminal domain
Aeryth_RS00420	SM00448	cheY-homologous receiver domain
Aeryth_RS00420	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS00425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS00425	SM00387	Histidine kinase-like ATPases
Aeryth_RS00425	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS00470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Aeryth_RS00475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS00475	SM00387	Histidine kinase-like ATPases
Aeryth_RS00475	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS00480	SM00448	cheY-homologous receiver domain
Aeryth_RS00480	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS00490	SM00226	Low molecular weight phosphatase family
Aeryth_RS00520	SM00861	Transketolase, pyrimidine binding domain
Aeryth_RS00590	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Aeryth_RS00610	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00715	SM00938	Nitrogen regulatory protein P-II
Aeryth_RS00725	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS00735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS00745	SM00226	Low molecular weight phosphatase family
Aeryth_RS00820	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS00845	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS00845	SM01012	Aeryth_RS00845
Aeryth_RS00850	SM00248	ankyrin repeats
Aeryth_RS00870	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00890	SM00822	Aeryth_RS00890
Aeryth_RS00930	SM00450	Rhodanese Homology Domain
Aeryth_RS00965	SM00327	von Willebrand factor (vWF) type A domain
Aeryth_RS00975	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS00985	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS00985	SM00448	cheY-homologous receiver domain
Aeryth_RS00995	SM00507	HNH nucleases
Aeryth_RS01010	SM00271	DnaJ molecular chaperone homology domain
Aeryth_RS01015	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS01080	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS01090	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS01225	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS01225	SM01086	C-terminal, D2-small domain, of ClpB protein
Aeryth_RS01270	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS01300	SM00529	Helix-turn-helix diphteria tox regulatory element
Aeryth_RS01300	SM00899	Aeryth_RS01300
Aeryth_RS01325	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS01420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS01420	SM01012	Aeryth_RS01420
Aeryth_RS01425	SM01012	Aeryth_RS01425
Aeryth_RS01485	SM00704	CDGSH-type zinc finger. Function unknown.
Aeryth_RS01490	SM01236	Aeryth_RS01490
Aeryth_RS01500	SM00464	Found in ATP-dependent protease La (LON)
Aeryth_RS01505	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS01520	SM00493	Aeryth_RS01520
Aeryth_RS01550	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Aeryth_RS01620	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Aeryth_RS01690	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS01700	SM00838	Elongation factor G C-terminus
Aeryth_RS01705	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS01730	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS01735	SM00062	Bacterial periplasmic substrate-binding proteins
Aeryth_RS01750	SM00855	Phosphoglycerate mutase family
Aeryth_RS01760	SM00448	cheY-homologous receiver domain
Aeryth_RS01760	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS01765	SM00387	Histidine kinase-like ATPases
Aeryth_RS01765	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS01780	SM01058	CarD-like/TRCF domain
Aeryth_RS01795	SM00840	Aeryth_RS01795
Aeryth_RS01800	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Aeryth_RS01845	SM00903	Flavin reductase like domain
Aeryth_RS01855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS01855	SM00895	Aeryth_RS01855
Aeryth_RS01930	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS01930	SM00876	Biotin and Thiamin Synthesis associated domain
Aeryth_RS01965	SM01230	Aeryth_RS01965
Aeryth_RS01995	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS02025	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS02065	SM00829	Enoylreductase
Aeryth_RS02085	SM00267	diguanylate cyclase
Aeryth_RS02095	SM01091	Transporter associated domain
Aeryth_RS02100	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS02120	SM00752	Horizontally Transferred TransMembrane Domain
Aeryth_RS02175	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Aeryth_RS02210	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS02225	SM00986	Uracil DNA glycosylase superfamily
Aeryth_RS02225	SM00987	UreE urease accessory protein, C-terminal domain 
Aeryth_RS02290	SM00357	Cold shock protein domain
Aeryth_RS02340	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS02340	SM00930	Aeryth_RS02340
Aeryth_RS02355	SM00797	Allophanate hydrolase subunit 2
Aeryth_RS02360	SM00796	Allophanate hydrolase subunit 1
Aeryth_RS02375	SM00883	Chaperonin 10 Kd subunit
Aeryth_RS02435	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS02435	SM01240	Aeryth_RS02435
Aeryth_RS02450	SM01240	Aeryth_RS02450
Aeryth_RS02480	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Aeryth_RS02480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS02485	SM00100	Cyclic nucleotide-monophosphate binding domain
Aeryth_RS02490	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Aeryth_RS02610	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS02615	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Aeryth_RS02625	SM00822	Aeryth_RS02625
Aeryth_RS02640	SM00822	Aeryth_RS02640
Aeryth_RS02695	SM00450	Rhodanese Homology Domain
Aeryth_RS02700	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS02735	SM00346	helix_turn_helix isocitrate lyase regulation
Aeryth_RS02835	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS02855	SM00905	Dihydroneopterin aldolase
Aeryth_RS02945	SM00420	helix_turn_helix, Deoxyribose operon repressor
Aeryth_RS02945	SM01134	Aeryth_RS02945
Aeryth_RS02965	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS02965	SM01086	C-terminal, D2-small domain, of ClpB protein
Aeryth_RS03005	SM00478	endonuclease III
Aeryth_RS03005	SM00525	Aeryth_RS03005
Aeryth_RS03025	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS03110	SM00881	CoA binding domain
Aeryth_RS03130	SM01004	Delta-aminolevulinic acid dehydratase
Aeryth_RS03150	SM00855	Phosphoglycerate mutase family
Aeryth_RS03220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Aeryth_RS03255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS03285	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Aeryth_RS03290	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Aeryth_RS03370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS03385	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS03390	SM00487	DEAD-like helicases superfamily
Aeryth_RS03390	SM00490	helicase superfamily c-terminal domain
Aeryth_RS03395	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Aeryth_RS03395	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Aeryth_RS03400	SM00344	helix_turn_helix ASNC type
Aeryth_RS03420	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Aeryth_RS03440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS03440	SM00895	Aeryth_RS03440
Aeryth_RS03445	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS03510	SM00919	Malic enzyme, NAD binding domain
Aeryth_RS03510	SM01274	Aeryth_RS03510
Aeryth_RS03525	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Aeryth_RS03525	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Aeryth_RS03530	SM00649	Ribosomal protein L11/L12
Aeryth_RS03545	SM00448	cheY-homologous receiver domain
Aeryth_RS03545	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS03565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS03565	SM00387	Histidine kinase-like ATPases
Aeryth_RS03565	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS03585	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS03645	SM00663	RNA polymerase I subunit A N-terminus
Aeryth_RS03665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS03665	SM00895	Aeryth_RS03665
Aeryth_RS03685	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Aeryth_RS03690	SM00788	Adenylosuccinate synthetase
Aeryth_RS03695	SM01209	Aeryth_RS03695
Aeryth_RS03695	SM01210	Aeryth_RS03695
Aeryth_RS03705	SM00998	Adenylosuccinate lyase C-terminus
Aeryth_RS03735	SM01211	Aeryth_RS03735
Aeryth_RS03750	SM00487	DEAD-like helicases superfamily
Aeryth_RS03750	SM00490	helicase superfamily c-terminal domain
Aeryth_RS03765	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Aeryth_RS03765	SM01232	Aeryth_RS03765
Aeryth_RS03805	SM00387	Histidine kinase-like ATPases
Aeryth_RS03810	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS03810	SM00448	cheY-homologous receiver domain
Aeryth_RS03835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS03865	SM00881	CoA binding domain
Aeryth_RS03885	SM00798	AICARFT/IMPCHase bienzyme
Aeryth_RS03885	SM00851	MGS-like domain
Aeryth_RS03915	SM00631	Aeryth_RS03915
Aeryth_RS03925	SM01060	Aeryth_RS03925
Aeryth_RS03950	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS04040	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS04065	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS04090	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
Aeryth_RS04110	SM01133	Aeryth_RS04110
Aeryth_RS04170	SM00387	Histidine kinase-like ATPases
Aeryth_RS04170	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS04175	SM00448	cheY-homologous receiver domain
Aeryth_RS04175	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS04230	SM00357	Cold shock protein domain
Aeryth_RS04240	SM00479	Aeryth_RS04240
Aeryth_RS04285	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS04290	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS04295	SM00867	YceI-like domain 
Aeryth_RS04320	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Aeryth_RS04345	SM00822	Aeryth_RS04345
Aeryth_RS04400	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS04420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Aeryth_RS04445	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Aeryth_RS04445	SM01232	Aeryth_RS04445
Aeryth_RS04450	SM00331	Sigma factor PP2C-like phosphatases
Aeryth_RS04525	SM00448	cheY-homologous receiver domain
Aeryth_RS04530	SM00091	PAS domain
Aeryth_RS04530	SM00387	Histidine kinase-like ATPases
Aeryth_RS04725	SM01208	Aeryth_RS04725
Aeryth_RS04730	SM00650	Ribosomal RNA adenine dimethylases
Aeryth_RS04740	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS04745	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS04775	SM01400	Aeryth_RS04775
Aeryth_RS04790	SM00448	cheY-homologous receiver domain
Aeryth_RS04790	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS04810	SM00387	Histidine kinase-like ATPases
Aeryth_RS04810	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS04825	SM00487	DEAD-like helicases superfamily
Aeryth_RS04825	SM00490	helicase superfamily c-terminal domain
Aeryth_RS04825	SM00982	Aeryth_RS04825
Aeryth_RS04825	SM01058	CarD-like/TRCF domain
Aeryth_RS04845	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS04865	SM00644	Aeryth_RS04865
Aeryth_RS04865	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
Aeryth_RS04875	SM00878	Biotin carboxylase C-terminal domain
Aeryth_RS04920	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Aeryth_RS04930	SM01001	AIR carboxylase
Aeryth_RS04960	SM00903	Flavin reductase like domain
Aeryth_RS04980	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05025	SM00996	S-adenosyl-L-homocysteine hydrolase
Aeryth_RS05025	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Aeryth_RS05030	SM00448	cheY-homologous receiver domain
Aeryth_RS05030	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS05035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS05035	SM00387	Histidine kinase-like ATPases
Aeryth_RS05035	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS05040	SM00909	Sporulation and spore germination
Aeryth_RS05055	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS05055	SM00448	cheY-homologous receiver domain
Aeryth_RS05065	SM00957	SecA DEAD-like domain
Aeryth_RS05065	SM00958	SecA preprotein cross-linking domain
Aeryth_RS05075	SM00257	Lysin motif
Aeryth_RS05135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS05135	SM00387	Histidine kinase-like ATPases
Aeryth_RS05135	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS05140	SM00448	cheY-homologous receiver domain
Aeryth_RS05140	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS05215	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS05240	SM00937	Aeryth_RS05240
Aeryth_RS05255	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05270	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05345	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS05360	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05400	SM00756	Aeryth_RS05400
Aeryth_RS05415	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Aeryth_RS05415	SM01232	Aeryth_RS05415
Aeryth_RS05420	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05420	SM00487	DEAD-like helicases superfamily
Aeryth_RS05420	SM00490	helicase superfamily c-terminal domain
Aeryth_RS05440	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS05455	SM00487	DEAD-like helicases superfamily
Aeryth_RS05510	SM00248	ankyrin repeats
Aeryth_RS05515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS05515	SM00895	Aeryth_RS05515
Aeryth_RS05520	SM00232	JAB/MPN domain
Aeryth_RS05535	SM01400	Aeryth_RS05535
Aeryth_RS05540	SM00062	Bacterial periplasmic substrate-binding proteins
Aeryth_RS05540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Aeryth_RS05550	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS05560	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS05610	SM00883	Chaperonin 10 Kd subunit
Aeryth_RS05665	SM00822	Aeryth_RS05665
Aeryth_RS05735	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS05735	SM00924	MgtE intracellular N domain
Aeryth_RS05775	SM00327	von Willebrand factor (vWF) type A domain
Aeryth_RS05795	SM00487	DEAD-like helicases superfamily
Aeryth_RS05810	SM00855	Phosphoglycerate mutase family
Aeryth_RS05815	SM00481	DNA polymerase alpha chain like domain
Aeryth_RS05855	SM00487	DEAD-like helicases superfamily
Aeryth_RS05855	SM00490	helicase superfamily c-terminal domain
Aeryth_RS05880	SM00450	Rhodanese Homology Domain
Aeryth_RS05910	SM00341	Helicase and RNase D C-terminal
Aeryth_RS05955	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Aeryth_RS06000	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS06015	SM00342	helix_turn_helix, arabinose operon control protein
Aeryth_RS06075	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS06080	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS06085	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS06100	SM00448	cheY-homologous receiver domain
Aeryth_RS06100	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS06105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS06105	SM00387	Histidine kinase-like ATPases
Aeryth_RS06105	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS06200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS06200	SM00387	Histidine kinase-like ATPases
Aeryth_RS06200	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS06205	SM00448	cheY-homologous receiver domain
Aeryth_RS06205	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS06245	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Aeryth_RS06355	SM00855	Phosphoglycerate mutase family
Aeryth_RS06475	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS06495	SM00387	Histidine kinase-like ATPases
Aeryth_RS06495	SM00911	HWE histidine kinase
Aeryth_RS06510	SM00919	Malic enzyme, NAD binding domain
Aeryth_RS06510	SM01274	Aeryth_RS06510
Aeryth_RS06515	SM00829	Enoylreductase
Aeryth_RS06525	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS06535	SM00861	Transketolase, pyrimidine binding domain
Aeryth_RS06575	SM00052	Putative diguanylate phosphodiesterase
Aeryth_RS06585	SM00448	cheY-homologous receiver domain
Aeryth_RS06590	SM00836	DALR anticodon binding domain
Aeryth_RS06590	SM01016	Arginyl tRNA synthetase N terminal dom
Aeryth_RS06615	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS06640	SM00357	Cold shock protein domain
Aeryth_RS06640	SM00959	Rho termination factor, N-terminal domain
Aeryth_RS06655	SM00937	Aeryth_RS06655
Aeryth_RS06715	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS06795	SM00829	Enoylreductase
Aeryth_RS06870	SM00893	Electron transfer flavoprotein domain
Aeryth_RS06875	SM00893	Electron transfer flavoprotein domain
Aeryth_RS06895	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS06910	SM00481	DNA polymerase alpha chain like domain
Aeryth_RS06965	SM00292	breast cancer carboxy-terminal domain
Aeryth_RS06965	SM00532	Ligase N family
Aeryth_RS06985	SM00845	GatB domain
Aeryth_RS07065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS07080	SM01329	Aeryth_RS07080
Aeryth_RS07110	SM00829	Enoylreductase
Aeryth_RS07175	SM00917	LeuA allosteric (dimerisation) domain
Aeryth_RS07205	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07245	SM00968	SMC proteins Flexible Hinge Domain
Aeryth_RS07280	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07285	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07290	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07290	SM00962	SRP54-type protein, GTPase domain
Aeryth_RS07290	SM00963	SRP54-type protein, helical bundle domain
Aeryth_RS07300	SM00938	Nitrogen regulatory protein P-II
Aeryth_RS07305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Aeryth_RS07310	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07310	SM00962	SRP54-type protein, GTPase domain
Aeryth_RS07310	SM00963	SRP54-type protein, helical bundle domain
Aeryth_RS07315	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07320	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07390	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07415	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07475	SM00460	Transglutaminase/protease-like homologues
Aeryth_RS07485	SM00460	Transglutaminase/protease-like homologues
Aeryth_RS07495	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS07525	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS07525	SM00448	cheY-homologous receiver domain
Aeryth_RS07535	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07595	SM00316	Ribosomal protein S1-like RNA-binding domain
Aeryth_RS07620	SM00155	Phospholipase D. Active site motifs.
Aeryth_RS07630	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS07635	SM00448	cheY-homologous receiver domain
Aeryth_RS07635	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS07640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS07640	SM00387	Histidine kinase-like ATPases
Aeryth_RS07640	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS07650	SM00904	Riboflavin kinase
Aeryth_RS07655	SM01387	Aeryth_RS07655
Aeryth_RS07660	SM00316	Ribosomal protein S1-like RNA-binding domain
Aeryth_RS07660	SM00322	K homology RNA-binding domain
Aeryth_RS07695	SM00244	prohibitin homologues
Aeryth_RS07730	SM01130	Aeryth_RS07730
Aeryth_RS07735	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS07745	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07745	SM00843	Aeryth_RS07745
Aeryth_RS07765	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS07785	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07815	SM00062	Bacterial periplasmic substrate-binding proteins
Aeryth_RS07820	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07845	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS07860	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS07905	SM00487	DEAD-like helicases superfamily
Aeryth_RS07905	SM00491	Aeryth_RS07905
Aeryth_RS07915	SM00257	Lysin motif
Aeryth_RS07945	SM00894	Excalibur calcium-binding domain
Aeryth_RS08020	SM00240	Forkhead associated domain
Aeryth_RS08025	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS08065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS08065	SM00895	Aeryth_RS08065
Aeryth_RS08075	SM00487	DEAD-like helicases superfamily
Aeryth_RS08075	SM00490	helicase superfamily c-terminal domain
Aeryth_RS08100	SM00357	Cold shock protein domain
Aeryth_RS08120	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS08190	SM00387	Histidine kinase-like ATPases
Aeryth_RS08190	SM00433	TopoisomeraseII
Aeryth_RS08200	SM00947	Carbonic anhydrase
Aeryth_RS08215	SM00434	DNA Topoisomerase IV
Aeryth_RS08225	SM00881	CoA binding domain
Aeryth_RS08435	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Aeryth_RS08445	SM00387	Histidine kinase-like ATPases
Aeryth_RS08445	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS08455	SM00873	B3/4 domain
Aeryth_RS08455	SM00874	tRNA synthetase B5 domain
Aeryth_RS08455	SM00896	Ferredoxin-fold anticodon binding domain
Aeryth_RS08465	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Aeryth_RS08505	SM00823	Phosphopantetheine attachment site
Aeryth_RS08520	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS08540	SM00363	S4 RNA-binding domain
Aeryth_RS08615	SM00240	Forkhead associated domain
Aeryth_RS08620	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS08630	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS08730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS08785	SM00344	helix_turn_helix ASNC type
Aeryth_RS08815	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS08855	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS08895	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Aeryth_RS08895	SM00475	5'-3' exonuclease
Aeryth_RS08900	SM00487	DEAD-like helicases superfamily
Aeryth_RS08900	SM00490	helicase superfamily c-terminal domain
Aeryth_RS08900	SM01142	Aeryth_RS08900
Aeryth_RS08905	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Aeryth_RS08980	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09005	SM01018	B12 binding domain
Aeryth_RS09055	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09065	SM00857	Resolvase, N terminal domain
Aeryth_RS09075	SM00822	Aeryth_RS09075
Aeryth_RS09105	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09120	SM00267	diguanylate cyclase
Aeryth_RS09150	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09150	SM00487	DEAD-like helicases superfamily
Aeryth_RS09150	SM00490	helicase superfamily c-terminal domain
Aeryth_RS09150	SM00847	Helicase associated domain (HA2)  Add an annotation
Aeryth_RS09160	SM00829	Enoylreductase
Aeryth_RS09165	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS09195	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09235	SM00244	prohibitin homologues
Aeryth_RS09245	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09270	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS09285	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09305	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09340	SM00954	Region found in RelA / SpoT proteins
Aeryth_RS09350	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09375	SM00861	Transketolase, pyrimidine binding domain
Aeryth_RS09425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Aeryth_RS09450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Aeryth_RS09450	SM00465	GIY-YIG type nucleases (URI domain)
Aeryth_RS09470	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS09500	SM00644	Aeryth_RS09500
Aeryth_RS09510	SM00487	DEAD-like helicases superfamily
Aeryth_RS09510	SM00490	helicase superfamily c-terminal domain
Aeryth_RS09525	SM00822	Aeryth_RS09525
Aeryth_RS09535	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Aeryth_RS09550	SM00861	Transketolase, pyrimidine binding domain
Aeryth_RS09555	SM00903	Flavin reductase like domain
Aeryth_RS09590	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09610	SM01409	Aeryth_RS09610
Aeryth_RS09615	SM00072	Guanylate kinase homologues.
Aeryth_RS09630	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Aeryth_RS09635	SM00851	MGS-like domain
Aeryth_RS09635	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Aeryth_RS09640	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Aeryth_RS09665	SM00507	HNH nucleases
Aeryth_RS09685	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09700	SM00841	Elongation factor P, C-terminal
Aeryth_RS09700	SM01185	Aeryth_RS09700
Aeryth_RS09745	SM00732	Likely ribonuclease with RNase H fold.
Aeryth_RS09750	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Aeryth_RS09765	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09790	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS09810	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS09810	SM00331	Sigma factor PP2C-like phosphatases
Aeryth_RS09835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Aeryth_RS09835	SM00954	Region found in RelA / SpoT proteins
Aeryth_RS09860	SM01323	Aeryth_RS09860
Aeryth_RS09865	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS09870	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Aeryth_RS09920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Aeryth_RS09940	SM00344	helix_turn_helix ASNC type
Aeryth_RS10110	SM00341	Helicase and RNase D C-terminal
Aeryth_RS10110	SM00474	3'-5' exonuclease
Aeryth_RS10140	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS10210	SM00342	helix_turn_helix, arabinose operon control protein
Aeryth_RS10215	SM00316	Ribosomal protein S1-like RNA-binding domain
Aeryth_RS10265	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Aeryth_RS10265	SM00474	3'-5' exonuclease
Aeryth_RS10265	SM00475	5'-3' exonuclease
Aeryth_RS10265	SM00482	DNA polymerase A domain
Aeryth_RS10290	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10295	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10305	SM00448	cheY-homologous receiver domain
Aeryth_RS10305	SM01012	Aeryth_RS10305
Aeryth_RS10400	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10405	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10465	SM00481	DNA polymerase alpha chain like domain
Aeryth_RS10475	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10495	SM00363	S4 RNA-binding domain
Aeryth_RS10540	SM00864	Tubulin/FtsZ family, GTPase domain
Aeryth_RS10540	SM00865	Tubulin/FtsZ family, C-terminal domain
Aeryth_RS10630	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS10630	SM00740	Aeryth_RS10630
Aeryth_RS10645	SM00563	Phosphate acyltransferases
Aeryth_RS10700	SM00465	GIY-YIG type nucleases (URI domain)
Aeryth_RS10700	SM00479	Aeryth_RS10700
Aeryth_RS10715	SM00448	cheY-homologous receiver domain
Aeryth_RS10820	SM01022	Aeryth_RS10820
Aeryth_RS10860	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS10865	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS10865	SM00448	cheY-homologous receiver domain
Aeryth_RS10870	SM00387	Histidine kinase-like ATPases
Aeryth_RS10875	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS10895	SM01230	Aeryth_RS10895
Aeryth_RS10940	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS10940	SM00740	Aeryth_RS10940
Aeryth_RS10980	SM00829	Enoylreductase
Aeryth_RS11065	SM01230	Aeryth_RS11065
Aeryth_RS11125	SM00855	Phosphoglycerate mutase family
Aeryth_RS11140	SM00487	DEAD-like helicases superfamily
Aeryth_RS11140	SM00490	helicase superfamily c-terminal domain
Aeryth_RS11255	SM00400	zinc finger
Aeryth_RS11255	SM00493	Aeryth_RS11255
Aeryth_RS11260	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Aeryth_RS11270	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Aeryth_RS11270	SM01232	Aeryth_RS11270
Aeryth_RS11275	SM00358	Double-stranded RNA binding motif
Aeryth_RS11275	SM00535	Ribonuclease III family
Aeryth_RS11305	SM00487	DEAD-like helicases superfamily
Aeryth_RS11305	SM00490	helicase superfamily c-terminal domain
Aeryth_RS11310	SM01120	Aeryth_RS11310
Aeryth_RS11310	SM01121	Aeryth_RS11310
Aeryth_RS11355	SM00563	Phosphate acyltransferases
Aeryth_RS11375	SM00346	helix_turn_helix isocitrate lyase regulation
Aeryth_RS11395	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
Aeryth_RS11410	SM00342	helix_turn_helix, arabinose operon control protein
Aeryth_RS11410	SM00478	endonuclease III
Aeryth_RS11410	SM01009	AlkA N-terminal domain
Aeryth_RS11480	SM01150	Aeryth_RS11480
Aeryth_RS11495	SM00917	LeuA allosteric (dimerisation) domain
Aeryth_RS11505	SM00346	helix_turn_helix isocitrate lyase regulation
Aeryth_RS11520	SM00460	Transglutaminase/protease-like homologues
Aeryth_RS11555	SM00481	DNA polymerase alpha chain like domain
Aeryth_RS11575	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS11575	SM01091	Transporter associated domain
Aeryth_RS11595	SM00271	DnaJ molecular chaperone homology domain
Aeryth_RS11620	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS11635	SM00838	Elongation factor G C-terminus
Aeryth_RS11665	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Aeryth_RS11670	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS11690	SM00563	Phosphate acyltransferases
Aeryth_RS11760	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS11810	SM00752	Horizontally Transferred TransMembrane Domain
Aeryth_RS11825	SM00752	Horizontally Transferred TransMembrane Domain
Aeryth_RS11840	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS11910	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS11935	SM00409	Immunoglobulin
Aeryth_RS11945	SM00855	Phosphoglycerate mutase family
Aeryth_RS11970	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Aeryth_RS11990	SM00316	Ribosomal protein S1-like RNA-binding domain
Aeryth_RS12005	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS12025	SM00562	Aeryth_RS12025
Aeryth_RS12030	SM00642	Alpha-amylase domain
Aeryth_RS12050	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12115	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12115	SM00994	ClpX C4-type zinc finger
Aeryth_RS12115	SM01086	C-terminal, D2-small domain, of ClpB protein
Aeryth_RS12130	SM00822	Aeryth_RS12130
Aeryth_RS12140	SM00354	helix_turn _helix lactose operon repressor
Aeryth_RS12155	SM00354	helix_turn _helix lactose operon repressor
Aeryth_RS12170	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS12215	SM00866	Aeryth_RS12215
Aeryth_RS12270	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12275	SM00563	Phosphate acyltransferases
Aeryth_RS12290	SM00363	S4 RNA-binding domain
Aeryth_RS12350	SM00363	S4 RNA-binding domain
Aeryth_RS12405	SM00852	Probable molybdopterin binding domain
Aeryth_RS12415	SM00852	Probable molybdopterin binding domain
Aeryth_RS12430	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS12435	SM01091	Transporter associated domain
Aeryth_RS12440	SM00858	Aeryth_RS12440
Aeryth_RS12495	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS12545	SM00529	Helix-turn-helix diphteria tox regulatory element
Aeryth_RS12630	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12770	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12820	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS12840	SM00670	Large family of predicted nucleotide-binding domains
Aeryth_RS12855	SM00487	DEAD-like helicases superfamily
Aeryth_RS12855	SM00490	helicase superfamily c-terminal domain
Aeryth_RS12930	SM00986	Uracil DNA glycosylase superfamily
Aeryth_RS12930	SM00987	UreE urease accessory protein, C-terminal domain 
Aeryth_RS12940	SM00822	Aeryth_RS12940
Aeryth_RS13010	SM00344	helix_turn_helix ASNC type
Aeryth_RS13015	SM00861	Transketolase, pyrimidine binding domain
Aeryth_RS13045	SM00487	DEAD-like helicases superfamily
Aeryth_RS13045	SM00490	helicase superfamily c-terminal domain
Aeryth_RS13045	SM00847	Helicase associated domain (HA2)  Add an annotation
Aeryth_RS13070	SM00506	Appr-1"-p processing enzyme
Aeryth_RS13090	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS13155	SM00387	Histidine kinase-like ATPases
Aeryth_RS13160	SM00448	cheY-homologous receiver domain
Aeryth_RS13175	SM01192	Aeryth_RS13175
Aeryth_RS13175	SM01193	Aeryth_RS13175
Aeryth_RS13200	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS13260	SM00357	Cold shock protein domain
Aeryth_RS13360	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS13370	SM00563	Phosphate acyltransferases
Aeryth_RS13410	SM01005	Alanine racemase, C-terminal domain
Aeryth_RS13495	SM00662	RNA polymerases D
Aeryth_RS13500	SM00363	S4 RNA-binding domain
Aeryth_RS13500	SM01390	Aeryth_RS13500
Aeryth_RS13520	SM00316	Ribosomal protein S1-like RNA-binding domain
Aeryth_RS13525	SM00344	helix_turn_helix ASNC type
Aeryth_RS13600	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Aeryth_RS13605	SM01374	Aeryth_RS13605
Aeryth_RS13625	SM00322	K homology RNA-binding domain
Aeryth_RS13640	SM01382	Aeryth_RS13640
Aeryth_RS13640	SM01383	Aeryth_RS13640
Aeryth_RS13660	SM01403	Aeryth_RS13660
Aeryth_RS13665	SM00823	Phosphopantetheine attachment site
Aeryth_RS13690	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS13700	SM00838	Elongation factor G C-terminus
Aeryth_RS13700	SM00889	Elongation factor G, domain IV
Aeryth_RS13760	SM00344	helix_turn_helix ASNC type
Aeryth_RS13900	SM00830	Chorismate mutase type II
Aeryth_RS13920	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Aeryth_RS13920	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Aeryth_RS13920	SM00493	Aeryth_RS13920
Aeryth_RS13935	SM00487	DEAD-like helicases superfamily
Aeryth_RS13935	SM00490	helicase superfamily c-terminal domain
Aeryth_RS14010	SM00387	Histidine kinase-like ATPases
Aeryth_RS14085	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS14085	SM01240	Aeryth_RS14085
Aeryth_RS14100	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14110	SM00448	cheY-homologous receiver domain
Aeryth_RS14110	SM00850	LytTr DNA-binding domain
Aeryth_RS14165	SM00478	endonuclease III
Aeryth_RS14165	SM00525	Aeryth_RS14165
Aeryth_RS14170	SM00100	Cyclic nucleotide-monophosphate binding domain
Aeryth_RS14170	SM00419	helix_turn_helix, cAMP Regulatory protein
Aeryth_RS14200	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS14220	SM00487	DEAD-like helicases superfamily
Aeryth_RS14220	SM00490	helicase superfamily c-terminal domain
Aeryth_RS14230	SM00226	Low molecular weight phosphatase family
Aeryth_RS14270	SM00450	Rhodanese Homology Domain
Aeryth_RS14300	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS14330	SM00855	Phosphoglycerate mutase family
Aeryth_RS14350	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14385	SM00507	HNH nucleases
Aeryth_RS14410	SM00062	Bacterial periplasmic substrate-binding proteins
Aeryth_RS14415	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14470	SM00729	Elongator protein 3, MiaB family, Radical SAM
Aeryth_RS14545	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS14555	SM00822	Aeryth_RS14555
Aeryth_RS14565	SM00829	Enoylreductase
Aeryth_RS14570	SM00903	Flavin reductase like domain
Aeryth_RS14600	SM00855	Phosphoglycerate mutase family
Aeryth_RS14620	SM00327	von Willebrand factor (vWF) type A domain
Aeryth_RS14620	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14635	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS14640	SM00116	Domain in cystathionine beta-synthase and other proteins.
Aeryth_RS14640	SM01091	Transporter associated domain
Aeryth_RS14660	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14765	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS14765	SM01043	Bacterial transcriptional activator domain
Aeryth_RS14800	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Aeryth_RS14800	SM00267	diguanylate cyclase
Aeryth_RS14810	SM00563	Phosphate acyltransferases
Aeryth_RS14820	SM00479	Aeryth_RS14820
Aeryth_RS14830	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
Aeryth_RS14885	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS14905	SM00829	Enoylreductase
Aeryth_RS14915	SM01006	Siderophore biosynthesis protein domain
Aeryth_RS14930	SM01006	Siderophore biosynthesis protein domain
Aeryth_RS14950	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS15065	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS15120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Aeryth_RS15120	SM00387	Histidine kinase-like ATPases
Aeryth_RS15120	SM00388	His Kinase A (phosphoacceptor) domain
Aeryth_RS15125	SM00448	cheY-homologous receiver domain
Aeryth_RS15125	SM00862	Transcriptional regulatory protein, C terminal
Aeryth_RS15265	SM01007	Class II Aldolase and Adducin N-terminal domain
Aeryth_RS15275	SM00354	helix_turn _helix lactose operon repressor
Aeryth_RS15290	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS15340	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Aeryth_RS15350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS15360	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Aeryth_RS15360	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Aeryth_RS15370	SM00052	Putative diguanylate phosphodiesterase
Aeryth_RS15370	SM00267	diguanylate cyclase
Aeryth_RS15415	SM00267	diguanylate cyclase
Aeryth_RS15425	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
Aeryth_RS15450	SM00487	DEAD-like helicases superfamily
Aeryth_RS15450	SM00490	helicase superfamily c-terminal domain
Aeryth_RS15565	SM00984	UDP binding domain
Aeryth_RS15590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Aeryth_RS15710	SM00465	GIY-YIG type nucleases (URI domain)
Aeryth_RS15715	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS15720	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS15745	SM00886	Stress responsive A/B Barrel Domain
Aeryth_RS15750	SM00849	Metallo-beta-lactamase superfamily
Aeryth_RS15835	SM00824	Thioesterase
Aeryth_RS15850	SM00650	Ribosomal RNA adenine dimethylases
Aeryth_RS15855	SM00758	Aeryth_RS15855
Aeryth_RS15855	SM01217	Aeryth_RS15855
Aeryth_RS15870	SM00824	Thioesterase
Aeryth_RS15895	SM00822	Aeryth_RS15895
Aeryth_RS15895	SM00823	Phosphopantetheine attachment site
Aeryth_RS15895	SM00824	Thioesterase
Aeryth_RS15895	SM00825	Beta-ketoacyl synthase
Aeryth_RS15895	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Aeryth_RS15895	SM01294	Aeryth_RS15895
Aeryth_RS15900	SM00822	Aeryth_RS15900
Aeryth_RS15900	SM00823	Phosphopantetheine attachment site
Aeryth_RS15900	SM00825	Beta-ketoacyl synthase
Aeryth_RS15900	SM00826	Aeryth_RS15900
Aeryth_RS15900	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Aeryth_RS15900	SM00829	Enoylreductase
Aeryth_RS15925	SM00347	helix_turn_helix multiple antibiotic resistance protein
Aeryth_RS15950	SM01007	Class II Aldolase and Adducin N-terminal domain
Aeryth_RS16005	SM00829	Enoylreductase
Aeryth_RS16045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Aeryth_RS16090	SM00014	Acid phosphatase homologues
Aeryth_RS16090	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Aeryth_RS16120	SM00642	Alpha-amylase domain
Aeryth_RS16125	SM00642	Alpha-amylase domain
Aeryth_RS16135	SM00642	Alpha-amylase domain
Aeryth_RS16145	SM00642	Alpha-amylase domain
Aeryth_RS16150	SM00642	Alpha-amylase domain
Aeryth_RS16155	SM00642	Alpha-amylase domain
Aeryth_RS16165	SM00642	Alpha-amylase domain
Aeryth_RS16195	SM00450	Rhodanese Homology Domain
Aeryth_RS16200	SM00411	bacterial (prokaryotic) histone like domain
Aeryth_RS16235	SM00530	Helix-turn-helix XRE-family like proteins 
Aeryth_RS16275	SM00878	Biotin carboxylase C-terminal domain
Aeryth_RS16325	SM00342	helix_turn_helix, arabinose operon control protein
Aeryth_RS16345	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS16370	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS16380	SM00829	Enoylreductase
Aeryth_RS16475	SM00240	Forkhead associated domain
Aeryth_RS16480	SM00240	Forkhead associated domain
Aeryth_RS16485	SM00331	Sigma factor PP2C-like phosphatases
Aeryth_RS16485	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Aeryth_RS16500	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS16500	SM00740	Aeryth_RS16500
Aeryth_RS16515	SM00855	Phosphoglycerate mutase family
Aeryth_RS16555	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Aeryth_RS16590	SM00052	Putative diguanylate phosphodiesterase
Aeryth_RS16610	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS16640	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS16665	SM00507	HNH nucleases
Aeryth_RS16680	SM00422	helix_turn_helix, mercury resistance
Aeryth_RS16715	SM00342	helix_turn_helix, arabinose operon control protein
Aeryth_RS16730	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Aeryth_RS16750	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS16760	SM00062	Bacterial periplasmic substrate-binding proteins
Aeryth_RS16760	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Aeryth_RS16785	SM00829	Enoylreductase
Aeryth_RS16790	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Aeryth_RS16855	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS16860	SM00028	Tetratricopeptide repeats
Aeryth_RS16885	SM00387	Histidine kinase-like ATPases
Aeryth_RS16890	SM00421	helix_turn_helix, Lux Regulon
Aeryth_RS16890	SM00448	cheY-homologous receiver domain
Aeryth_RS17000	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS17015	SM00507	HNH nucleases
Aeryth_RS17050	SM00382	ATPases associated with a variety of cellular activities
Aeryth_RS17100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Aeryth_RS17125	SM00460	Transglutaminase/protease-like homologues
Aeryth_RS17150	SM00507	HNH nucleases
Aeryth_RS17155	SM00220	Serine/Threonine protein kinases, catalytic domain
Aeryth_RS17170	SM00470	ParB-like nuclease domain
Aeryth_RS17185	SM00393	Putative single-stranded nucleic acids-binding domain
