BOQ57_RS00005 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BOQ57_RS00010 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS00010 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BOQ57_RS00020 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00035 SM01234 BOQ57_RS00035 BOQ57_RS00060 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00065 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00080 SM01228 BOQ57_RS00080 BOQ57_RS00095 SM00470 ParB-like nuclease domain BOQ57_RS00135 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00160 SM00387 Histidine kinase-like ATPases BOQ57_RS00160 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS00165 SM00448 cheY-homologous receiver domain BOQ57_RS00165 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS00170 SM00420 helix_turn_helix, Deoxyribose operon repressor BOQ57_RS00170 SM01134 BOQ57_RS00170 BOQ57_RS00180 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS00295 SM01004 Delta-aminolevulinic acid dehydratase BOQ57_RS00305 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS00305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS00305 SM00091 PAS domain BOQ57_RS00305 SM00267 diguanylate cyclase BOQ57_RS00325 SM00487 DEAD-like helicases superfamily BOQ57_RS00325 SM00490 helicase superfamily c-terminal domain BOQ57_RS00335 SM00357 Cold shock protein domain BOQ57_RS00335 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00335 SM00959 Rho termination factor, N-terminal domain BOQ57_RS00370 SM00450 Rhodanese Homology Domain BOQ57_RS00380 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS00385 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00390 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00410 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS00425 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS00425 SM00866 BOQ57_RS00425 BOQ57_RS00430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS00430 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS00435 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS00495 SM00836 DALR anticodon binding domain BOQ57_RS00510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS00510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS00540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS00540 SM00387 Histidine kinase-like ATPases BOQ57_RS00540 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS00545 SM00448 cheY-homologous receiver domain BOQ57_RS00545 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS00610 SM00881 CoA binding domain BOQ57_RS00690 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BOQ57_RS00690 SM01232 BOQ57_RS00690 BOQ57_RS00740 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS00745 SM00829 Enoylreductase BOQ57_RS00780 SM00563 Phosphate acyltransferases BOQ57_RS00815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS00815 SM00387 Histidine kinase-like ATPases BOQ57_RS00815 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS00820 SM00448 cheY-homologous receiver domain BOQ57_RS00820 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS00830 SM00971 Serine acetyltransferase, N-terminal BOQ57_RS00855 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BOQ57_RS00855 SM00474 3'-5' exonuclease BOQ57_RS00855 SM00475 5'-3' exonuclease BOQ57_RS00855 SM00482 DNA polymerase A domain BOQ57_RS00900 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS00905 SM01038 Beta galactosidase small chain BOQ57_RS00950 SM00829 Enoylreductase BOQ57_RS00970 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS01010 SM01321 BOQ57_RS01010 BOQ57_RS01025 SM00326 Src homology 3 domains BOQ57_RS01080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS01080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS01085 SM00831 Cation transporter/ATPase, N-terminus BOQ57_RS01095 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS01115 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS01135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BOQ57_RS01135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BOQ57_RS01190 SM00257 Lysin motif BOQ57_RS01210 SM01001 AIR carboxylase BOQ57_RS01260 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS01270 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS01270 SM00448 cheY-homologous receiver domain BOQ57_RS01275 SM00091 PAS domain BOQ57_RS01275 SM00387 Histidine kinase-like ATPases BOQ57_RS01275 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS01285 SM01230 BOQ57_RS01285 BOQ57_RS01325 SM00487 DEAD-like helicases superfamily BOQ57_RS01325 SM00490 helicase superfamily c-terminal domain BOQ57_RS01330 SM00155 Phospholipase D. Active site motifs. BOQ57_RS01355 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS01375 SM00450 Rhodanese Homology Domain BOQ57_RS01420 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS01420 SM00732 Likely ribonuclease with RNase H fold. BOQ57_RS01430 SM00448 cheY-homologous receiver domain BOQ57_RS01430 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS01435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS01435 SM00387 Histidine kinase-like ATPases BOQ57_RS01435 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS01445 SM01403 BOQ57_RS01445 BOQ57_RS01465 SM01382 BOQ57_RS01465 BOQ57_RS01465 SM01383 BOQ57_RS01465 BOQ57_RS01480 SM00322 K homology RNA-binding domain BOQ57_RS01500 SM01374 BOQ57_RS01500 BOQ57_RS01570 SM00363 S4 RNA-binding domain BOQ57_RS01570 SM01390 BOQ57_RS01570 BOQ57_RS01575 SM00662 RNA polymerases D BOQ57_RS01745 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS01750 SM00155 Phospholipase D. Active site motifs. BOQ57_RS01780 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS01780 SM00962 SRP54-type protein, GTPase domain BOQ57_RS01780 SM00963 SRP54-type protein, helical bundle domain BOQ57_RS01785 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS01800 SM00947 Carbonic anhydrase BOQ57_RS01805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS01805 SM00866 BOQ57_RS01805 BOQ57_RS01835 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS01840 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS01840 SM00267 diguanylate cyclase BOQ57_RS01870 SM00965 Secretin and TonB N terminus short domain BOQ57_RS01885 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS01955 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS01965 SM00886 Stress responsive A/B Barrel Domain BOQ57_RS02025 SM00448 cheY-homologous receiver domain BOQ57_RS02025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS02030 SM00387 Histidine kinase-like ATPases BOQ57_RS02030 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS02030 SM00448 cheY-homologous receiver domain BOQ57_RS02035 SM00331 Sigma factor PP2C-like phosphatases BOQ57_RS02035 SM00387 Histidine kinase-like ATPases BOQ57_RS02045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS02045 SM00091 PAS domain BOQ57_RS02050 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS02095 SM01018 B12 binding domain BOQ57_RS02110 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS02115 SM00448 cheY-homologous receiver domain BOQ57_RS02115 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS02135 SM00999 Aerolysin toxin BOQ57_RS02165 SM00876 Biotin and Thiamin Synthesis associated domain BOQ57_RS02195 SM00267 diguanylate cyclase BOQ57_RS02305 SM01219 BOQ57_RS02305 BOQ57_RS02345 SM00100 Cyclic nucleotide-monophosphate binding domain BOQ57_RS02375 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS02385 SM00852 Probable molybdopterin binding domain BOQ57_RS02390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS02405 SM00344 helix_turn_helix ASNC type BOQ57_RS02425 SM00642 Alpha-amylase domain BOQ57_RS02570 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS02580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BOQ57_RS02630 SM00487 DEAD-like helicases superfamily BOQ57_RS02630 SM00490 helicase superfamily c-terminal domain BOQ57_RS02675 SM00271 DnaJ molecular chaperone homology domain BOQ57_RS02710 SM00357 Cold shock protein domain BOQ57_RS02710 SM00955 BOQ57_RS02710 BOQ57_RS02725 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS02760 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS02760 SM00895 BOQ57_RS02760 BOQ57_RS02775 SM00363 S4 RNA-binding domain BOQ57_RS02790 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS02875 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS02905 SM00859 Semialdehyde dehydrogenase, NAD binding domain BOQ57_RS02950 SM01266 BOQ57_RS02950 BOQ57_RS02980 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS02995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS02995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS02995 SM01049 BOQ57_RS02995 BOQ57_RS03030 SM00245 tail specific protease BOQ57_RS03110 SM00487 DEAD-like helicases superfamily BOQ57_RS03110 SM00490 helicase superfamily c-terminal domain BOQ57_RS03130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS03200 SM00938 Nitrogen regulatory protein P-II BOQ57_RS03215 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03230 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03235 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS03235 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BOQ57_RS03255 SM00671 Sel1-like repeats. BOQ57_RS03270 SM01091 Transporter associated domain BOQ57_RS03280 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03280 SM00962 SRP54-type protein, GTPase domain BOQ57_RS03280 SM00963 SRP54-type protein, helical bundle domain BOQ57_RS03310 SM00927 DNA mismatch repair enzyme MutH BOQ57_RS03325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS03355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BOQ57_RS03370 SM00904 Riboflavin kinase BOQ57_RS03445 SM00938 Nitrogen regulatory protein P-II BOQ57_RS03460 SM00267 diguanylate cyclase BOQ57_RS03465 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS03465 SM00357 Cold shock protein domain BOQ57_RS03465 SM00955 BOQ57_RS03465 BOQ57_RS03470 SM00967 RNA 2'-O ribose methyltransferase substrate binding BOQ57_RS03540 SM00829 Enoylreductase BOQ57_RS03585 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03590 SM00327 von Willebrand factor (vWF) type A domain BOQ57_RS03595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS03595 SM00091 PAS domain BOQ57_RS03595 SM00267 diguanylate cyclase BOQ57_RS03600 SM00028 Tetratricopeptide repeats BOQ57_RS03600 SM00267 diguanylate cyclase BOQ57_RS03615 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS03625 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS03665 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS03675 SM00986 Uracil DNA glycosylase superfamily BOQ57_RS03675 SM00987 UreE urease accessory protein, C-terminal domain BOQ57_RS03680 SM00487 DEAD-like helicases superfamily BOQ57_RS03680 SM00490 helicase superfamily c-terminal domain BOQ57_RS03770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS03770 SM00387 Histidine kinase-like ATPases BOQ57_RS03770 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS03775 SM00448 cheY-homologous receiver domain BOQ57_RS03775 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS03785 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03790 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS03795 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS03835 SM00822 BOQ57_RS03835 BOQ57_RS03850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS03850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS03860 SM00287 Bacterial SH3 domain homologues BOQ57_RS03885 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BOQ57_RS03985 SM00358 Double-stranded RNA binding motif BOQ57_RS03985 SM00535 Ribonuclease III family BOQ57_RS04050 SM00420 helix_turn_helix, Deoxyribose operon repressor BOQ57_RS04050 SM01134 BOQ57_RS04050 BOQ57_RS04055 SM00644 BOQ57_RS04055 BOQ57_RS04065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS04065 SM00387 Histidine kinase-like ATPases BOQ57_RS04065 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS04065 SM00448 cheY-homologous receiver domain BOQ57_RS04075 SM00954 Region found in RelA / SpoT proteins BOQ57_RS04090 SM01192 BOQ57_RS04090 BOQ57_RS04090 SM01193 BOQ57_RS04090 BOQ57_RS04130 SM00257 Lysin motif BOQ57_RS04155 SM00400 zinc finger BOQ57_RS04155 SM00493 BOQ57_RS04155 BOQ57_RS04155 SM00766 DNA primase DnaG DnaB-binding BOQ57_RS04170 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BOQ57_RS04170 SM00632 BOQ57_RS04170 BOQ57_RS04170 SM00642 Alpha-amylase domain BOQ57_RS04185 SM01209 BOQ57_RS04185 BOQ57_RS04185 SM01210 BOQ57_RS04185 BOQ57_RS04190 SM00798 AICARFT/IMPCHase bienzyme BOQ57_RS04190 SM00851 MGS-like domain BOQ57_RS04195 SM00422 helix_turn_helix, mercury resistance BOQ57_RS04210 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS04285 SM00883 Chaperonin 10 Kd subunit BOQ57_RS04300 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS04300 SM00267 diguanylate cyclase BOQ57_RS04315 SM00487 DEAD-like helicases superfamily BOQ57_RS04315 SM00490 helicase superfamily c-terminal domain BOQ57_RS04355 SM00670 Large family of predicted nucleotide-binding domains BOQ57_RS04360 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS04395 SM01329 BOQ57_RS04395 BOQ57_RS04400 SM00917 LeuA allosteric (dimerisation) domain BOQ57_RS04410 SM00014 Acid phosphatase homologues BOQ57_RS04465 SM01130 BOQ57_RS04465 BOQ57_RS04510 SM00073 Histidine Phosphotransfer domain BOQ57_RS04510 SM00091 PAS domain BOQ57_RS04510 SM00387 Histidine kinase-like ATPases BOQ57_RS04510 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS04510 SM00448 cheY-homologous receiver domain BOQ57_RS04515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS04525 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS04525 SM00073 Histidine Phosphotransfer domain BOQ57_RS04525 SM00091 PAS domain BOQ57_RS04525 SM00387 Histidine kinase-like ATPases BOQ57_RS04525 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS04525 SM00448 cheY-homologous receiver domain BOQ57_RS04530 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS04530 SM00448 cheY-homologous receiver domain BOQ57_RS04535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS04535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS04540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BOQ57_RS04555 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS04555 SM00930 BOQ57_RS04555 BOQ57_RS04590 SM00257 Lysin motif BOQ57_RS04590 SM00646 BOQ57_RS04590 BOQ57_RS04595 SM00853 MutL C terminal dimerisation domain BOQ57_RS04595 SM01340 BOQ57_RS04595 BOQ57_RS04615 SM00244 prohibitin homologues BOQ57_RS04620 SM00244 prohibitin homologues BOQ57_RS04670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS04680 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS04695 SM00650 Ribosomal RNA adenine dimethylases BOQ57_RS04725 SM00271 DnaJ molecular chaperone homology domain BOQ57_RS04740 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS04790 SM01133 BOQ57_RS04790 BOQ57_RS04810 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS04865 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS04875 SM00387 Histidine kinase-like ATPases BOQ57_RS04875 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS04875 SM00448 cheY-homologous receiver domain BOQ57_RS04880 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BOQ57_RS04880 SM00495 Chitin-binding domain type 3 BOQ57_RS04880 SM00636 BOQ57_RS04880 BOQ57_RS04890 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BOQ57_RS04890 SM00495 Chitin-binding domain type 3 BOQ57_RS04900 SM00100 Cyclic nucleotide-monophosphate binding domain BOQ57_RS04900 SM00419 helix_turn_helix, cAMP Regulatory protein BOQ57_RS04960 SM00984 UDP binding domain BOQ57_RS04970 SM00267 diguanylate cyclase BOQ57_RS04980 SM00260 Two component signalling adaptor domain BOQ57_RS04980 SM00448 cheY-homologous receiver domain BOQ57_RS05005 SM00320 WD40 repeats BOQ57_RS05015 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS05015 SM00448 cheY-homologous receiver domain BOQ57_RS05040 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS05045 SM00978 BOQ57_RS05045 BOQ57_RS05055 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS05060 SM01005 Alanine racemase, C-terminal domain BOQ57_RS05075 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS05100 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS05100 SM00448 cheY-homologous receiver domain BOQ57_RS05105 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS05105 SM00387 Histidine kinase-like ATPases BOQ57_RS05105 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS05105 SM00448 cheY-homologous receiver domain BOQ57_RS05150 SM00448 cheY-homologous receiver domain BOQ57_RS05160 SM00138 Methyltransferase, chemotaxis proteins BOQ57_RS05165 SM00091 PAS domain BOQ57_RS05165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS05165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS05170 SM00260 Two component signalling adaptor domain BOQ57_RS05175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS05175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS05180 SM00073 Histidine Phosphotransfer domain BOQ57_RS05180 SM00260 Two component signalling adaptor domain BOQ57_RS05180 SM00387 Histidine kinase-like ATPases BOQ57_RS05180 SM01231 BOQ57_RS05180 BOQ57_RS05190 SM00448 cheY-homologous receiver domain BOQ57_RS05195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS05235 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS05235 SM00478 endonuclease III BOQ57_RS05235 SM01009 AlkA N-terminal domain BOQ57_RS05250 SM00463 Small MutS-related domain BOQ57_RS05280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS05280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS05310 SM00830 Chorismate mutase type II BOQ57_RS05345 SM00422 helix_turn_helix, mercury resistance BOQ57_RS05435 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS05555 SM00900 BOQ57_RS05555 BOQ57_RS05595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS05595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS05625 SM01329 BOQ57_RS05625 BOQ57_RS05630 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BOQ57_RS05630 SM00475 5'-3' exonuclease BOQ57_RS05640 SM00267 diguanylate cyclase BOQ57_RS05645 SM00028 Tetratricopeptide repeats BOQ57_RS05725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS05770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BOQ57_RS05780 SM00935 Outer membrane protein (OmpH-like) BOQ57_RS05810 SM00481 DNA polymerase alpha chain like domain BOQ57_RS05820 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS05855 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS05890 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS05905 SM00977 TilS substrate C-terminal domain BOQ57_RS05910 SM00267 diguanylate cyclase BOQ57_RS05935 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS05935 SM00448 cheY-homologous receiver domain BOQ57_RS05945 SM00642 Alpha-amylase domain BOQ57_RS05970 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS06005 SM00771 ZipA, C-terminal domain (FtsZ-binding) BOQ57_RS06010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BOQ57_RS06010 SM00292 breast cancer carboxy-terminal domain BOQ57_RS06010 SM00532 Ligase N family BOQ57_RS06045 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS06060 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS06075 SM00919 Malic enzyme, NAD binding domain BOQ57_RS06075 SM01274 BOQ57_RS06075 BOQ57_RS06080 SM00387 Histidine kinase-like ATPases BOQ57_RS06085 SM00448 cheY-homologous receiver domain BOQ57_RS06095 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS06105 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06125 SM00448 cheY-homologous receiver domain BOQ57_RS06125 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS06130 SM00387 Histidine kinase-like ATPases BOQ57_RS06130 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS06170 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06230 SM00267 diguanylate cyclase BOQ57_RS06245 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS06250 SM00919 Malic enzyme, NAD binding domain BOQ57_RS06250 SM01274 BOQ57_RS06250 BOQ57_RS06275 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS06290 SM00267 diguanylate cyclase BOQ57_RS06310 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS06325 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS06375 SM00642 Alpha-amylase domain BOQ57_RS06395 SM00155 Phospholipase D. Active site motifs. BOQ57_RS06470 SM00448 cheY-homologous receiver domain BOQ57_RS06470 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS06475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS06475 SM00387 Histidine kinase-like ATPases BOQ57_RS06475 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS06500 SM00877 BOQ57_RS06500 BOQ57_RS06530 SM00877 BOQ57_RS06530 BOQ57_RS06535 SM00877 BOQ57_RS06535 BOQ57_RS06540 SM00877 BOQ57_RS06540 BOQ57_RS06550 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS06580 SM00481 DNA polymerase alpha chain like domain BOQ57_RS06620 SM00387 Histidine kinase-like ATPases BOQ57_RS06625 SM00448 cheY-homologous receiver domain BOQ57_RS06625 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS06630 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06640 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06665 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS06670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS06700 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06760 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06760 SM00962 SRP54-type protein, GTPase domain BOQ57_RS06775 SM00448 cheY-homologous receiver domain BOQ57_RS06785 SM00073 Histidine Phosphotransfer domain BOQ57_RS06785 SM00260 Two component signalling adaptor domain BOQ57_RS06785 SM00387 Histidine kinase-like ATPases BOQ57_RS06785 SM01231 BOQ57_RS06785 BOQ57_RS06790 SM00448 cheY-homologous receiver domain BOQ57_RS06810 SM00260 Two component signalling adaptor domain BOQ57_RS06815 SM00260 Two component signalling adaptor domain BOQ57_RS06825 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS06925 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BOQ57_RS07000 SM00422 helix_turn_helix, mercury resistance BOQ57_RS07010 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS07050 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS07055 SM01329 BOQ57_RS07055 BOQ57_RS07080 SM00507 HNH nucleases BOQ57_RS07150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS07150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS07175 SM01091 Transporter associated domain BOQ57_RS07240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS07250 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS07250 SM00876 Biotin and Thiamin Synthesis associated domain BOQ57_RS07275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS07290 SM00890 Domain of unknown function BOQ57_RS07370 SM00458 Ricin-type beta-trefoil BOQ57_RS07450 SM01081 Putative carbohydrate binding domain BOQ57_RS07505 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS07530 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS07605 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS07605 SM00267 diguanylate cyclase BOQ57_RS07615 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS07640 SM00257 Lysin motif BOQ57_RS07645 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS07660 SM00479 BOQ57_RS07660 BOQ57_RS07670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS07690 SM00073 Histidine Phosphotransfer domain BOQ57_RS07700 SM00897 FIST N domain BOQ57_RS07700 SM01204 BOQ57_RS07700 BOQ57_RS07705 SM00387 Histidine kinase-like ATPases BOQ57_RS07705 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS07705 SM00448 cheY-homologous receiver domain BOQ57_RS07710 SM00464 Found in ATP-dependent protease La (LON) BOQ57_RS07715 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS07715 SM00448 cheY-homologous receiver domain BOQ57_RS07720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS07720 SM00387 Histidine kinase-like ATPases BOQ57_RS07725 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS07740 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BOQ57_RS07765 SM00852 Probable molybdopterin binding domain BOQ57_RS07795 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS07810 SM00852 Probable molybdopterin binding domain BOQ57_RS07820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS07820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS07840 SM00867 YceI-like domain BOQ57_RS07850 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BOQ57_RS07860 SM00563 Phosphate acyltransferases BOQ57_RS07895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS07895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS07920 SM00855 Phosphoglycerate mutase family BOQ57_RS07925 SM00507 HNH nucleases BOQ57_RS07945 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BOQ57_RS07955 SM00363 S4 RNA-binding domain BOQ57_RS07985 SM00871 Bacterial transcription activator, effector binding domain BOQ57_RS08015 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS08085 SM00420 helix_turn_helix, Deoxyribose operon repressor BOQ57_RS08085 SM01134 BOQ57_RS08085 BOQ57_RS08105 SM00830 Chorismate mutase type II BOQ57_RS08180 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS08250 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS08255 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS08255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BOQ57_RS08280 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS08280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS08280 SM00091 PAS domain BOQ57_RS08280 SM00267 diguanylate cyclase BOQ57_RS08285 SM00450 Rhodanese Homology Domain BOQ57_RS08290 SM01359 BOQ57_RS08290 BOQ57_RS08290 SM01360 BOQ57_RS08290 BOQ57_RS08305 SM00981 BOQ57_RS08305 BOQ57_RS08430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS08430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS08500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BOQ57_RS08505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BOQ57_RS08515 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS08555 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS08570 SM01323 BOQ57_RS08570 BOQ57_RS08585 SM00450 Rhodanese Homology Domain BOQ57_RS08590 SM00028 Tetratricopeptide repeats BOQ57_RS08640 SM00271 DnaJ molecular chaperone homology domain BOQ57_RS08665 SM00562 BOQ57_RS08665 BOQ57_RS08675 SM00028 Tetratricopeptide repeats BOQ57_RS08680 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS08700 SM00564 beta-propeller repeat BOQ57_RS08720 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS08725 SM01211 BOQ57_RS08725 BOQ57_RS08765 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BOQ57_RS08765 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BOQ57_RS08770 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BOQ57_RS08840 SM00360 RNA recognition motif BOQ57_RS08865 SM00091 PAS domain BOQ57_RS08870 SM00448 cheY-homologous receiver domain BOQ57_RS08885 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS08885 SM00267 diguanylate cyclase BOQ57_RS08935 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS08940 SM00411 bacterial (prokaryotic) histone like domain BOQ57_RS08950 SM00028 Tetratricopeptide repeats BOQ57_RS08955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BOQ57_RS08965 SM01144 BOQ57_RS08965 BOQ57_RS08990 SM00528 Domain in histone-like proteins of HNS family BOQ57_RS09005 SM01154 BOQ57_RS09005 BOQ57_RS09050 SM00671 Sel1-like repeats. BOQ57_RS09100 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09100 SM01086 C-terminal, D2-small domain, of ClpB protein BOQ57_RS09105 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09140 SM00047 Lysozyme subfamily 2 BOQ57_RS09165 SM00357 Cold shock protein domain BOQ57_RS09175 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09175 SM01086 C-terminal, D2-small domain, of ClpB protein BOQ57_RS09180 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS09200 SM00267 diguanylate cyclase BOQ57_RS09200 SM00448 cheY-homologous receiver domain BOQ57_RS09215 SM00344 helix_turn_helix ASNC type BOQ57_RS09220 SM00843 BOQ57_RS09220 BOQ57_RS09230 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09260 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09265 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09285 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09335 SM00091 PAS domain BOQ57_RS09335 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09345 SM00267 diguanylate cyclase BOQ57_RS09345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS09400 SM00479 BOQ57_RS09400 BOQ57_RS09410 SM00497 Intron encoded nuclease repeat motif BOQ57_RS09455 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS09460 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS09615 SM00060 Fibronectin type 3 domain BOQ57_RS09645 SM01007 Class II Aldolase and Adducin N-terminal domain BOQ57_RS09660 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09670 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS09735 SM00825 Beta-ketoacyl synthase BOQ57_RS09775 SM00861 Transketolase, pyrimidine binding domain BOQ57_RS09790 SM00881 CoA binding domain BOQ57_RS09815 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS09825 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS09825 SM00866 BOQ57_RS09825 BOQ57_RS09865 SM00859 Semialdehyde dehydrogenase, NAD binding domain BOQ57_RS09895 SM00822 BOQ57_RS09895 BOQ57_RS09900 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS09900 SM00871 Bacterial transcription activator, effector binding domain BOQ57_RS09930 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS10035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS10035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS10035 SM01049 BOQ57_RS10035 BOQ57_RS10045 SM00091 PAS domain BOQ57_RS10045 SM00387 Histidine kinase-like ATPases BOQ57_RS10050 SM00448 cheY-homologous receiver domain BOQ57_RS10070 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS10090 SM00487 DEAD-like helicases superfamily BOQ57_RS10090 SM00490 helicase superfamily c-terminal domain BOQ57_RS10115 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS10130 SM00763 PrkA AAA domain BOQ57_RS10135 SM00487 DEAD-like helicases superfamily BOQ57_RS10135 SM00490 helicase superfamily c-terminal domain BOQ57_RS10195 SM00387 Histidine kinase-like ATPases BOQ57_RS10195 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS10195 SM00448 cheY-homologous receiver domain BOQ57_RS10200 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS10210 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS10275 SM01118 BOQ57_RS10275 BOQ57_RS10300 SM00487 DEAD-like helicases superfamily BOQ57_RS10300 SM00490 helicase superfamily c-terminal domain BOQ57_RS10310 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BOQ57_RS10325 SM01144 BOQ57_RS10325 BOQ57_RS10345 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS10360 SM00642 Alpha-amylase domain BOQ57_RS10510 SM00782 PhnA Zinc-Ribbon BOQ57_RS10520 SM00495 Chitin-binding domain type 3 BOQ57_RS10535 SM00855 Phosphoglycerate mutase family BOQ57_RS10540 SM00091 PAS domain BOQ57_RS10540 SM00267 diguanylate cyclase BOQ57_RS10550 SM00463 Small MutS-related domain BOQ57_RS10570 SM00487 DEAD-like helicases superfamily BOQ57_RS10570 SM00490 helicase superfamily c-terminal domain BOQ57_RS10575 SM00953 BOQ57_RS10575 BOQ57_RS10590 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS10615 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS10655 SM00925 MltA specific insert domain BOQ57_RS10685 SM00434 DNA Topoisomerase IV BOQ57_RS10690 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS10695 SM00671 Sel1-like repeats. BOQ57_RS10700 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BOQ57_RS10725 SM00873 B3/4 domain BOQ57_RS10725 SM00874 tRNA synthetase B5 domain BOQ57_RS10725 SM00896 Ferredoxin-fold anticodon binding domain BOQ57_RS10730 SM00411 bacterial (prokaryotic) histone like domain BOQ57_RS10735 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS10735 SM00387 Histidine kinase-like ATPases BOQ57_RS10735 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS10735 SM00448 cheY-homologous receiver domain BOQ57_RS10760 SM00267 diguanylate cyclase BOQ57_RS10765 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS10785 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS10820 SM00100 Cyclic nucleotide-monophosphate binding domain BOQ57_RS10820 SM00419 helix_turn_helix, cAMP Regulatory protein BOQ57_RS10875 SM00945 ProQ/FINO family BOQ57_RS10880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BOQ57_RS10880 SM00245 tail specific protease BOQ57_RS10910 SM00981 BOQ57_RS10910 BOQ57_RS10920 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS11010 SM00822 BOQ57_RS11010 BOQ57_RS11100 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS11120 SM00825 Beta-ketoacyl synthase BOQ57_RS11130 SM00822 BOQ57_RS11130 BOQ57_RS11135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BOQ57_RS11185 SM00363 S4 RNA-binding domain BOQ57_RS11190 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS11230 SM00857 Resolvase, N terminal domain BOQ57_RS11510 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS11520 SM00422 helix_turn_helix, mercury resistance BOQ57_RS11545 SM00422 helix_turn_helix, mercury resistance BOQ57_RS11585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS11590 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BOQ57_RS11610 SM00450 Rhodanese Homology Domain BOQ57_RS11615 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS11620 SM00448 cheY-homologous receiver domain BOQ57_RS11620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS11625 SM00387 Histidine kinase-like ATPases BOQ57_RS11625 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS11625 SM00448 cheY-homologous receiver domain BOQ57_RS11640 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS11640 SM00487 DEAD-like helicases superfamily BOQ57_RS11640 SM00490 helicase superfamily c-terminal domain BOQ57_RS11640 SM00847 Helicase associated domain (HA2) Add an annotation BOQ57_RS11645 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS11650 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS11665 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS11690 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS11695 SM00341 Helicase and RNase D C-terminal BOQ57_RS11695 SM00474 3'-5' exonuclease BOQ57_RS11720 SM00491 BOQ57_RS11720 BOQ57_RS11760 SM00448 cheY-homologous receiver domain BOQ57_RS11760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS11765 SM00091 PAS domain BOQ57_RS11770 SM00073 Histidine Phosphotransfer domain BOQ57_RS11770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS11770 SM00091 PAS domain BOQ57_RS11770 SM00387 Histidine kinase-like ATPases BOQ57_RS11770 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS11770 SM00448 cheY-homologous receiver domain BOQ57_RS11805 SM00237 Domains in Na-Ca exchangers and integrin-beta4 BOQ57_RS11815 SM01092 CO dehydrogenase flavoprotein C-terminal domain BOQ57_RS11820 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BOQ57_RS11840 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BOQ57_RS11845 SM01092 CO dehydrogenase flavoprotein C-terminal domain BOQ57_RS11905 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS11920 SM01322 BOQ57_RS11920 BOQ57_RS11955 SM00327 von Willebrand factor (vWF) type A domain BOQ57_RS11960 SM00028 Tetratricopeptide repeats BOQ57_RS11990 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS12000 SM00422 helix_turn_helix, mercury resistance BOQ57_RS12085 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS12165 SM00486 DNA polymerase type-B family BOQ57_RS12175 SM00267 diguanylate cyclase BOQ57_RS12185 SM00090 RIO-like kinase BOQ57_RS12215 SM00518 AP endonuclease family 2 BOQ57_RS12225 SM00822 BOQ57_RS12225 BOQ57_RS12230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS12240 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS12240 SM00267 diguanylate cyclase BOQ57_RS12255 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS12290 SM00857 Resolvase, N terminal domain BOQ57_RS12305 SM00487 DEAD-like helicases superfamily BOQ57_RS12325 SM00885 D5 N terminal like BOQ57_RS12355 SM00822 BOQ57_RS12355 BOQ57_RS12400 SM00878 Biotin carboxylase C-terminal domain BOQ57_RS12400 SM01209 BOQ57_RS12400 BOQ57_RS12410 SM00422 helix_turn_helix, mercury resistance BOQ57_RS12415 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS12450 SM00100 Cyclic nucleotide-monophosphate binding domain BOQ57_RS12450 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS12455 SM00479 BOQ57_RS12455 BOQ57_RS12470 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12480 SM00411 bacterial (prokaryotic) histone like domain BOQ57_RS12485 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12485 SM00464 Found in ATP-dependent protease La (LON) BOQ57_RS12490 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12490 SM00994 ClpX C4-type zinc finger BOQ57_RS12490 SM01086 C-terminal, D2-small domain, of ClpB protein BOQ57_RS12515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS12525 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12540 SM00487 DEAD-like helicases superfamily BOQ57_RS12540 SM00490 helicase superfamily c-terminal domain BOQ57_RS12540 SM00982 BOQ57_RS12540 BOQ57_RS12540 SM01058 CarD-like/TRCF domain BOQ57_RS12565 SM00855 Phosphoglycerate mutase family BOQ57_RS12580 SM00364 Leucine-rich repeats, bacterial type BOQ57_RS12580 SM00369 Leucine-rich repeats, typical (most populated) subfamily BOQ57_RS12590 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS12610 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS12610 SM01240 BOQ57_RS12610 BOQ57_RS12645 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS12650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS12650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS12670 SM00893 Electron transfer flavoprotein domain BOQ57_RS12675 SM00893 Electron transfer flavoprotein domain BOQ57_RS12720 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12740 SM00823 Phosphopantetheine attachment site BOQ57_RS12745 SM00822 BOQ57_RS12745 BOQ57_RS12750 SM00823 Phosphopantetheine attachment site BOQ57_RS12785 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS12785 SM00267 diguanylate cyclase BOQ57_RS12825 SM00387 Histidine kinase-like ATPases BOQ57_RS12830 SM00493 BOQ57_RS12830 BOQ57_RS12840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS12840 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12950 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS12955 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13005 SM00448 cheY-homologous receiver domain BOQ57_RS13015 SM00073 Histidine Phosphotransfer domain BOQ57_RS13015 SM00260 Two component signalling adaptor domain BOQ57_RS13015 SM00387 Histidine kinase-like ATPases BOQ57_RS13015 SM01231 BOQ57_RS13015 BOQ57_RS13020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13025 SM00260 Two component signalling adaptor domain BOQ57_RS13030 SM00138 Methyltransferase, chemotaxis proteins BOQ57_RS13035 SM00448 cheY-homologous receiver domain BOQ57_RS13040 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS13040 SM00448 cheY-homologous receiver domain BOQ57_RS13045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS13050 SM01005 Alanine racemase, C-terminal domain BOQ57_RS13055 SM00873 B3/4 domain BOQ57_RS13060 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS13130 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13235 SM01126 BOQ57_RS13235 BOQ57_RS13385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS13420 SM01005 Alanine racemase, C-terminal domain BOQ57_RS13430 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13435 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS13475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS13480 SM00448 cheY-homologous receiver domain BOQ57_RS13480 SM00850 LytTr DNA-binding domain BOQ57_RS13500 SM00487 DEAD-like helicases superfamily BOQ57_RS13500 SM00490 helicase superfamily c-terminal domain BOQ57_RS13540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS13540 SM00091 PAS domain BOQ57_RS13540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13575 SM00900 BOQ57_RS13575 BOQ57_RS13585 SM00478 endonuclease III BOQ57_RS13585 SM00525 BOQ57_RS13585 BOQ57_RS13600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13605 SM00479 BOQ57_RS13605 BOQ57_RS13615 SM00487 DEAD-like helicases superfamily BOQ57_RS13615 SM00490 helicase superfamily c-terminal domain BOQ57_RS13640 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS13640 SM01091 Transporter associated domain BOQ57_RS13715 SM00267 diguanylate cyclase BOQ57_RS13720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS13800 SM00859 Semialdehyde dehydrogenase, NAD binding domain BOQ57_RS13810 SM00014 Acid phosphatase homologues BOQ57_RS13845 SM01217 BOQ57_RS13845 BOQ57_RS13850 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS13900 SM00327 von Willebrand factor (vWF) type A domain BOQ57_RS13930 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS13930 SM00267 diguanylate cyclase BOQ57_RS13950 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13955 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS13975 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS13985 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS14000 SM00422 helix_turn_helix, mercury resistance BOQ57_RS14015 SM01351 BOQ57_RS14015 BOQ57_RS14025 SM00487 DEAD-like helicases superfamily BOQ57_RS14025 SM00490 helicase superfamily c-terminal domain BOQ57_RS14040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS14060 SM00917 LeuA allosteric (dimerisation) domain BOQ57_RS14065 SM00851 MGS-like domain BOQ57_RS14065 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BOQ57_RS14070 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BOQ57_RS14125 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14135 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS14145 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14170 SM00899 BOQ57_RS14170 BOQ57_RS14200 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS14205 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS14210 SM00267 diguanylate cyclase BOQ57_RS14230 SM00840 BOQ57_RS14230 BOQ57_RS14285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS14290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS14290 SM00091 PAS domain BOQ57_RS14290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS14315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BOQ57_RS14315 SM00465 GIY-YIG type nucleases (URI domain) BOQ57_RS14320 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS14320 SM00448 cheY-homologous receiver domain BOQ57_RS14340 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14345 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS14380 SM00491 BOQ57_RS14380 BOQ57_RS14405 SM00098 Alkaline phosphatase homologues BOQ57_RS14410 SM00098 Alkaline phosphatase homologues BOQ57_RS14430 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS14430 SM00448 cheY-homologous receiver domain BOQ57_RS14435 SM00387 Histidine kinase-like ATPases BOQ57_RS14445 SM00267 diguanylate cyclase BOQ57_RS14450 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS14450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BOQ57_RS14460 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14490 SM01091 Transporter associated domain BOQ57_RS14500 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14565 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14565 SM00448 cheY-homologous receiver domain BOQ57_RS14570 SM00091 PAS domain BOQ57_RS14570 SM00387 Histidine kinase-like ATPases BOQ57_RS14570 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS14575 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS14600 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS14600 SM00924 MgtE intracellular N domain BOQ57_RS14615 SM00047 Lysozyme subfamily 2 BOQ57_RS14660 SM00138 Methyltransferase, chemotaxis proteins BOQ57_RS14665 SM00260 Two component signalling adaptor domain BOQ57_RS14665 SM00448 cheY-homologous receiver domain BOQ57_RS14670 SM00858 BOQ57_RS14670 BOQ57_RS14700 SM00363 S4 RNA-binding domain BOQ57_RS14705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS14730 SM00420 helix_turn_helix, Deoxyribose operon repressor BOQ57_RS14730 SM01134 BOQ57_RS14730 BOQ57_RS14765 SM00357 Cold shock protein domain BOQ57_RS14775 SM00861 Transketolase, pyrimidine binding domain BOQ57_RS14800 SM00487 DEAD-like helicases superfamily BOQ57_RS14800 SM00490 helicase superfamily c-terminal domain BOQ57_RS14815 SM01126 BOQ57_RS14815 BOQ57_RS14995 SM00984 UDP binding domain BOQ57_RS15045 SM00363 S4 RNA-binding domain BOQ57_RS15065 SM00481 DNA polymerase alpha chain like domain BOQ57_RS15110 SM00247 Beta/gamma crystallins BOQ57_RS15130 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS15135 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15230 SM00028 Tetratricopeptide repeats BOQ57_RS15230 SM00448 cheY-homologous receiver domain BOQ57_RS15290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS15290 SM00091 PAS domain BOQ57_RS15290 SM00267 diguanylate cyclase BOQ57_RS15315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BOQ57_RS15335 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS15340 SM00640 Glycosyl hydrolases family 32 BOQ57_RS15360 SM00271 DnaJ molecular chaperone homology domain BOQ57_RS15385 SM01131 BOQ57_RS15385 BOQ57_RS15400 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15425 SM00528 Domain in histone-like proteins of HNS family BOQ57_RS15445 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS15495 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS15495 SM00387 Histidine kinase-like ATPases BOQ57_RS15495 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS15495 SM00448 cheY-homologous receiver domain BOQ57_RS15495 SM00918 Ligated ion channel L-glutamate- and glycine-binding site BOQ57_RS15530 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15590 SM00448 cheY-homologous receiver domain BOQ57_RS15590 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS15605 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15610 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15645 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15670 SM00267 diguanylate cyclase BOQ57_RS15760 SM00919 Malic enzyme, NAD binding domain BOQ57_RS15760 SM01274 BOQ57_RS15760 BOQ57_RS15765 SM00387 Histidine kinase-like ATPases BOQ57_RS15765 SM00448 cheY-homologous receiver domain BOQ57_RS15780 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BOQ57_RS15830 SM00387 Histidine kinase-like ATPases BOQ57_RS15830 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS15835 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15835 SM00448 cheY-homologous receiver domain BOQ57_RS15850 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15860 SM00852 Probable molybdopterin binding domain BOQ57_RS15875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS15875 SM00091 PAS domain BOQ57_RS15875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS15925 SM00091 PAS domain BOQ57_RS15925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS15925 SM00387 Histidine kinase-like ATPases BOQ57_RS15925 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS15925 SM00448 cheY-homologous receiver domain BOQ57_RS15945 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15950 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS15970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS15980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BOQ57_RS15980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BOQ57_RS15980 SM00493 BOQ57_RS15980 BOQ57_RS16025 SM00788 Adenylosuccinate synthetase BOQ57_RS16035 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS16045 SM00363 S4 RNA-binding domain BOQ57_RS16075 SM00861 Transketolase, pyrimidine binding domain BOQ57_RS16085 SM00731 SprT homologues. BOQ57_RS16105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS16115 SM00732 Likely ribonuclease with RNase H fold. BOQ57_RS16155 SM00460 Transglutaminase/protease-like homologues BOQ57_RS16180 SM00986 Uracil DNA glycosylase superfamily BOQ57_RS16180 SM00987 UreE urease accessory protein, C-terminal domain BOQ57_RS16215 SM00937 BOQ57_RS16215 BOQ57_RS16240 SM01400 BOQ57_RS16240 BOQ57_RS16315 SM00100 Cyclic nucleotide-monophosphate binding domain BOQ57_RS16320 SM01022 BOQ57_RS16320 BOQ57_RS16330 SM00642 Alpha-amylase domain BOQ57_RS16345 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS16355 SM00890 Domain of unknown function BOQ57_RS16370 SM01150 BOQ57_RS16370 BOQ57_RS16435 SM00965 Secretin and TonB N terminus short domain BOQ57_RS16455 SM00842 Cell division protein FtsA BOQ57_RS16470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS16470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS16480 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS16520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS16520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS16580 SM01236 BOQ57_RS16580 BOQ57_RS16585 SM00822 BOQ57_RS16585 BOQ57_RS16595 SM00448 cheY-homologous receiver domain BOQ57_RS16595 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS16600 SM00387 Histidine kinase-like ATPases BOQ57_RS16600 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS16610 SM01240 BOQ57_RS16610 BOQ57_RS16620 SM00841 Elongation factor P, C-terminal BOQ57_RS16620 SM01185 BOQ57_RS16620 BOQ57_RS16645 SM00267 diguanylate cyclase BOQ57_RS16670 SM00267 diguanylate cyclase BOQ57_RS16675 SM00357 Cold shock protein domain BOQ57_RS16690 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS16705 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS16705 SM01091 Transporter associated domain BOQ57_RS16775 SM00936 Penicillin-binding protein 5, C-terminal domain BOQ57_RS16795 SM00729 Elongator protein 3, MiaB family, Radical SAM BOQ57_RS16825 SM00422 helix_turn_helix, mercury resistance BOQ57_RS16845 SM00267 diguanylate cyclase BOQ57_RS16905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BOQ57_RS16920 SM00387 Histidine kinase-like ATPases BOQ57_RS16920 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS16925 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS16925 SM00448 cheY-homologous receiver domain BOQ57_RS16930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS16935 SM00448 cheY-homologous receiver domain BOQ57_RS16935 SM00850 LytTr DNA-binding domain BOQ57_RS16965 SM00267 diguanylate cyclase BOQ57_RS16975 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS16975 SM00322 K homology RNA-binding domain BOQ57_RS16980 SM01387 BOQ57_RS16980 BOQ57_RS17000 SM00316 Ribosomal protein S1-like RNA-binding domain BOQ57_RS17040 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17050 SM01103 BOQ57_RS17050 BOQ57_RS17085 SM00861 Transketolase, pyrimidine binding domain BOQ57_RS17105 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17130 SM00020 Trypsin-like serine protease BOQ57_RS17195 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS17195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS17195 SM00091 PAS domain BOQ57_RS17195 SM00267 diguanylate cyclase BOQ57_RS17220 SM00878 Biotin carboxylase C-terminal domain BOQ57_RS17245 SM00829 Enoylreductase BOQ57_RS17260 SM01266 BOQ57_RS17260 BOQ57_RS17265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS17300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BOQ57_RS17310 SM00870 BOQ57_RS17310 BOQ57_RS17320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS17320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS17325 SM00937 BOQ57_RS17325 BOQ57_RS17365 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17390 SM00852 Probable molybdopterin binding domain BOQ57_RS17400 SM00825 Beta-ketoacyl synthase BOQ57_RS17405 SM00822 BOQ57_RS17405 BOQ57_RS17415 SM00825 Beta-ketoacyl synthase BOQ57_RS17475 SM00563 Phosphate acyltransferases BOQ57_RS17500 SM00477 DNA/RNA non-specific endonuclease BOQ57_RS17500 SM00892 DNA/RNA non-specific endonuclease BOQ57_RS17510 SM01057 Eukaryotic-type carbonic anhydrase BOQ57_RS17535 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17550 SM01012 BOQ57_RS17550 BOQ57_RS17560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BOQ57_RS17590 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BOQ57_RS17625 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17630 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17680 SM00028 Tetratricopeptide repeats BOQ57_RS17685 SM00495 Chitin-binding domain type 3 BOQ57_RS17685 SM00636 BOQ57_RS17685 BOQ57_RS17725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS17725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS17735 SM00357 Cold shock protein domain BOQ57_RS17775 SM00479 BOQ57_RS17775 BOQ57_RS17815 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS17825 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS17825 SM00091 PAS domain BOQ57_RS17825 SM00267 diguanylate cyclase BOQ57_RS17850 SM00267 diguanylate cyclase BOQ57_RS17950 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS17960 SM00450 Rhodanese Homology Domain BOQ57_RS17990 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS18005 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS18015 SM00260 Two component signalling adaptor domain BOQ57_RS18015 SM00448 cheY-homologous receiver domain BOQ57_RS18020 SM00327 von Willebrand factor (vWF) type A domain BOQ57_RS18230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BOQ57_RS18245 SM00448 cheY-homologous receiver domain BOQ57_RS18255 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS18310 SM00487 DEAD-like helicases superfamily BOQ57_RS18415 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS18435 SM00528 Domain in histone-like proteins of HNS family BOQ57_RS18500 SM00014 Acid phosphatase homologues BOQ57_RS18510 SM00448 cheY-homologous receiver domain BOQ57_RS18510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS18540 SM00487 DEAD-like helicases superfamily BOQ57_RS18540 SM00490 helicase superfamily c-terminal domain BOQ57_RS18540 SM00847 Helicase associated domain (HA2) Add an annotation BOQ57_RS18585 SM00450 Rhodanese Homology Domain BOQ57_RS18615 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS18670 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS18690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS18710 SM00507 HNH nucleases BOQ57_RS18740 SM00244 prohibitin homologues BOQ57_RS18750 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS18755 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS18800 SM00422 helix_turn_helix, mercury resistance BOQ57_RS18855 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS18920 SM00344 helix_turn_helix ASNC type BOQ57_RS18935 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS18945 SM00829 Enoylreductase BOQ57_RS18965 SM00642 Alpha-amylase domain BOQ57_RS18970 SM00642 Alpha-amylase domain BOQ57_RS18980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BOQ57_RS18995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS18995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS19125 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BOQ57_RS19135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS19135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS19195 SM01152 BOQ57_RS19195 BOQ57_RS19215 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19230 SM00487 DEAD-like helicases superfamily BOQ57_RS19230 SM00490 helicase superfamily c-terminal domain BOQ57_RS19280 SM00411 bacterial (prokaryotic) histone like domain BOQ57_RS19295 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS19320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS19320 SM00091 PAS domain BOQ57_RS19320 SM00267 diguanylate cyclase BOQ57_RS19335 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BOQ57_RS19340 SM01133 BOQ57_RS19340 BOQ57_RS19455 SM01091 Transporter associated domain BOQ57_RS19470 SM01126 BOQ57_RS19470 BOQ57_RS19515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BOQ57_RS19525 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19535 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BOQ57_RS19535 SM00534 ATPase domain of DNA mismatch repair MUTS family BOQ57_RS19550 SM00347 helix_turn_helix multiple antibiotic resistance protein BOQ57_RS19590 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19610 SM00986 Uracil DNA glycosylase superfamily BOQ57_RS19610 SM00987 UreE urease accessory protein, C-terminal domain BOQ57_RS19645 SM00563 Phosphate acyltransferases BOQ57_RS19675 SM00271 DnaJ molecular chaperone homology domain BOQ57_RS19720 SM00434 DNA Topoisomerase IV BOQ57_RS19725 SM00387 Histidine kinase-like ATPases BOQ57_RS19725 SM00433 TopoisomeraseII BOQ57_RS19795 SM01118 BOQ57_RS19795 BOQ57_RS19825 SM00450 Rhodanese Homology Domain BOQ57_RS19835 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS19865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS19870 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS19880 SM00478 endonuclease III BOQ57_RS19880 SM00525 BOQ57_RS19880 BOQ57_RS19905 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS19945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BOQ57_RS19945 SM00267 diguanylate cyclase BOQ57_RS19950 SM01130 BOQ57_RS19950 BOQ57_RS20020 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS20050 SM00344 helix_turn_helix ASNC type BOQ57_RS20055 SM01266 BOQ57_RS20055 BOQ57_RS20060 SM00642 Alpha-amylase domain BOQ57_RS20070 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS20085 SM00870 BOQ57_RS20085 BOQ57_RS20100 SM00851 MGS-like domain BOQ57_RS20135 SM00260 Two component signalling adaptor domain BOQ57_RS20135 SM00448 cheY-homologous receiver domain BOQ57_RS20180 SM01207 BOQ57_RS20180 BOQ57_RS20185 SM00905 Dihydroneopterin aldolase BOQ57_RS20205 SM00833 Cobalamin synthesis protein cobW C-terminal domain BOQ57_RS20225 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS20240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS20240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS20245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS20270 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS20270 SM00895 BOQ57_RS20270 BOQ57_RS20275 SM00644 BOQ57_RS20275 BOQ57_RS20340 SM00957 SecA DEAD-like domain BOQ57_RS20340 SM00958 SecA preprotein cross-linking domain BOQ57_RS20355 SM00864 Tubulin/FtsZ family, GTPase domain BOQ57_RS20355 SM00865 Tubulin/FtsZ family, C-terminal domain BOQ57_RS20360 SM00842 Cell division protein FtsA BOQ57_RS20450 SM00749 bacterial OsmY and nodulation domain BOQ57_RS20500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BOQ57_RS20505 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BOQ57_RS20580 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS20600 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS20605 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS20685 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS20715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS20715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS20725 SM00267 diguanylate cyclase BOQ57_RS20735 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS20745 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS20765 SM00357 Cold shock protein domain BOQ57_RS20780 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS20780 SM00267 diguanylate cyclase BOQ57_RS20785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS20785 SM00387 Histidine kinase-like ATPases BOQ57_RS20785 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS20790 SM00448 cheY-homologous receiver domain BOQ57_RS20790 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS20815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BOQ57_RS20815 SM00091 PAS domain BOQ57_RS20815 SM00267 diguanylate cyclase BOQ57_RS20820 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS20870 SM00530 Helix-turn-helix XRE-family like proteins BOQ57_RS20875 SM00345 helix_turn_helix gluconate operon transcriptional repressor BOQ57_RS20875 SM00866 BOQ57_RS20875 BOQ57_RS20900 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS20910 SM00267 diguanylate cyclase BOQ57_RS20925 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS20925 SM00871 Bacterial transcription activator, effector binding domain BOQ57_RS20935 SM01060 BOQ57_RS20935 BOQ57_RS20960 SM00014 Acid phosphatase homologues BOQ57_RS20990 SM00091 PAS domain BOQ57_RS21005 SM01120 BOQ57_RS21005 BOQ57_RS21060 SM00838 Elongation factor G C-terminus BOQ57_RS21060 SM00889 Elongation factor G, domain IV BOQ57_RS21100 SM00663 RNA polymerase I subunit A N-terminus BOQ57_RS21125 SM00649 Ribosomal protein L11/L12 BOQ57_RS21130 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BOQ57_RS21130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BOQ57_RS21185 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS21200 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BOQ57_RS21200 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BOQ57_RS21200 SM00493 BOQ57_RS21200 BOQ57_RS21220 SM00387 Histidine kinase-like ATPases BOQ57_RS21225 SM00448 cheY-homologous receiver domain BOQ57_RS21225 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS21260 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21260 SM00448 cheY-homologous receiver domain BOQ57_RS21270 SM00387 Histidine kinase-like ATPases BOQ57_RS21270 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS21285 SM00116 Domain in cystathionine beta-synthase and other proteins. BOQ57_RS21295 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS21300 SM00344 helix_turn_helix ASNC type BOQ57_RS21310 SM00849 Metallo-beta-lactamase superfamily BOQ57_RS21315 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21315 SM01086 C-terminal, D2-small domain, of ClpB protein BOQ57_RS21325 SM00363 S4 RNA-binding domain BOQ57_RS21360 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BOQ57_RS21360 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BOQ57_RS21370 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS21380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS21380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS21445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS21445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS21455 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21465 SM01038 Beta galactosidase small chain BOQ57_RS21470 SM00354 helix_turn _helix lactose operon repressor BOQ57_RS21515 SM00464 Found in ATP-dependent protease La (LON) BOQ57_RS21520 SM00836 DALR anticodon binding domain BOQ57_RS21520 SM01016 Arginyl tRNA synthetase N terminal dom BOQ57_RS21535 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21535 SM01086 C-terminal, D2-small domain, of ClpB protein BOQ57_RS21560 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21595 SM00924 MgtE intracellular N domain BOQ57_RS21600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BOQ57_RS21600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS21600 SM01358 BOQ57_RS21600 BOQ57_RS21630 SM00341 Helicase and RNase D C-terminal BOQ57_RS21630 SM00487 DEAD-like helicases superfamily BOQ57_RS21630 SM00490 helicase superfamily c-terminal domain BOQ57_RS21630 SM00956 BOQ57_RS21630 BOQ57_RS21670 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21690 SM01230 BOQ57_RS21690 BOQ57_RS21735 SM00642 Alpha-amylase domain BOQ57_RS21755 SM00448 cheY-homologous receiver domain BOQ57_RS21755 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS21760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS21760 SM00387 Histidine kinase-like ATPases BOQ57_RS21760 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS21770 SM00919 Malic enzyme, NAD binding domain BOQ57_RS21770 SM01274 BOQ57_RS21770 BOQ57_RS21785 SM00487 DEAD-like helicases superfamily BOQ57_RS21785 SM00490 helicase superfamily c-terminal domain BOQ57_RS21825 SM00382 ATPases associated with a variety of cellular activities BOQ57_RS21830 SM00563 Phosphate acyltransferases BOQ57_RS21835 SM00563 Phosphate acyltransferases BOQ57_RS21880 SM00267 diguanylate cyclase BOQ57_RS21885 SM00422 helix_turn_helix, mercury resistance BOQ57_RS21955 SM00829 Enoylreductase BOQ57_RS21965 SM00052 Putative diguanylate phosphodiesterase BOQ57_RS21965 SM00267 diguanylate cyclase BOQ57_RS22015 SM00360 RNA recognition motif BOQ57_RS22045 SM01001 AIR carboxylase BOQ57_RS22060 SM00448 cheY-homologous receiver domain BOQ57_RS22060 SM00850 LytTr DNA-binding domain BOQ57_RS22065 SM00387 Histidine kinase-like ATPases BOQ57_RS22075 SM00062 Bacterial periplasmic substrate-binding proteins BOQ57_RS22075 SM00387 Histidine kinase-like ATPases BOQ57_RS22075 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS22075 SM00448 cheY-homologous receiver domain BOQ57_RS22080 SM00421 helix_turn_helix, Lux Regulon BOQ57_RS22080 SM00448 cheY-homologous receiver domain BOQ57_RS22130 SM00267 diguanylate cyclase BOQ57_RS22175 SM00267 diguanylate cyclase BOQ57_RS22190 SM00072 Guanylate kinase homologues. BOQ57_RS22195 SM01409 BOQ57_RS22195 BOQ57_RS22200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BOQ57_RS22200 SM00954 Region found in RelA / SpoT proteins BOQ57_RS22225 SM00448 cheY-homologous receiver domain BOQ57_RS22230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS22230 SM00387 Histidine kinase-like ATPases BOQ57_RS22230 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS22250 SM00458 Ricin-type beta-trefoil BOQ57_RS22290 SM00091 PAS domain BOQ57_RS22290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BOQ57_RS22290 SM00387 Histidine kinase-like ATPases BOQ57_RS22320 SM00387 Histidine kinase-like ATPases BOQ57_RS22320 SM00388 His Kinase A (phosphoacceptor) domain BOQ57_RS22325 SM00448 cheY-homologous receiver domain BOQ57_RS22325 SM00862 Transcriptional regulatory protein, C terminal BOQ57_RS22335 SM00342 helix_turn_helix, arabinose operon control protein BOQ57_RS22370 SM00387 Histidine kinase-like ATPases BOQ57_RS22370 SM00433 TopoisomeraseII BOQ57_RS22380 SM00480 DNA polymerase III beta subunit