MC60_RS00020	SM00981	MC60_RS00020
MC60_RS00080	SM00858	MC60_RS00080
MC60_RS00200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS00200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS00210	SM00478	endonuclease III
MC60_RS00210	SM00525	MC60_RS00210
MC60_RS00220	SM00900	MC60_RS00220
MC60_RS00255	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS00255	SM00091	PAS domain
MC60_RS00255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS00295	SM00487	DEAD-like helicases superfamily
MC60_RS00295	SM00490	helicase superfamily c-terminal domain
MC60_RS00320	SM00448	cheY-homologous receiver domain
MC60_RS00320	SM00850	LytTr DNA-binding domain
MC60_RS00325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS00330	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS00360	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00365	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00375	SM01005	Alanine racemase, C-terminal domain
MC60_RS00415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS00415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS00615	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00685	SM00460	Transglutaminase/protease-like homologues
MC60_RS00760	SM00671	Sel1-like repeats.
MC60_RS00810	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00810	SM01086	C-terminal, D2-small domain, of ClpB protein
MC60_RS00815	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00850	SM00047	Lysozyme subfamily 2
MC60_RS00900	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00905	SM00382	ATPases associated with a variety of cellular activities
MC60_RS00945	SM00493	MC60_RS00945
MC60_RS00950	SM00387	Histidine kinase-like ATPases
MC60_RS00975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS00975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS00975	SM01049	MC60_RS00975
MC60_RS00990	SM00052	Putative diguanylate phosphodiesterase
MC60_RS00990	SM00267	diguanylate cyclase
MC60_RS01025	SM00823	Phosphopantetheine attachment site
MC60_RS01030	SM00822	MC60_RS01030
MC60_RS01035	SM00823	Phosphopantetheine attachment site
MC60_RS01055	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01100	SM00893	Electron transfer flavoprotein domain
MC60_RS01105	SM00893	Electron transfer flavoprotein domain
MC60_RS01240	SM00354	helix_turn _helix lactose operon repressor
MC60_RS01260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS01260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS01265	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01380	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS01405	SM01007	Class II Aldolase and Adducin N-terminal domain
MC60_RS01420	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01430	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS01485	SM00825	Beta-ketoacyl synthase
MC60_RS01525	SM00861	Transketolase, pyrimidine binding domain
MC60_RS01540	SM00881	CoA binding domain
MC60_RS01575	SM00873	B3/4 domain
MC60_RS01585	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MC60_RS01590	SM00357	Cold shock protein domain
MC60_RS01600	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01600	SM01086	C-terminal, D2-small domain, of ClpB protein
MC60_RS01605	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS01625	SM00267	diguanylate cyclase
MC60_RS01625	SM00448	cheY-homologous receiver domain
MC60_RS01635	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MC60_RS01635	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MC60_RS01640	SM00344	helix_turn_helix ASNC type
MC60_RS01645	SM00843	MC60_RS01645
MC60_RS01655	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01690	SM00354	helix_turn _helix lactose operon repressor
MC60_RS01700	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01705	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01725	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01765	SM00091	PAS domain
MC60_RS01765	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01775	SM00267	diguanylate cyclase
MC60_RS01775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS01785	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS01815	SM00642	Alpha-amylase domain
MC60_RS01825	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS01825	SM01240	MC60_RS01825
MC60_RS01840	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS01860	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS01865	SM00364	Leucine-rich repeats, bacterial type
MC60_RS01865	SM00369	Leucine-rich repeats, typical (most populated) subfamily
MC60_RS01880	SM00855	Phosphoglycerate mutase family
MC60_RS01905	SM00487	DEAD-like helicases superfamily
MC60_RS01905	SM00490	helicase superfamily c-terminal domain
MC60_RS01905	SM00982	MC60_RS01905
MC60_RS01905	SM01058	CarD-like/TRCF domain
MC60_RS01920	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS01955	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01955	SM00994	ClpX C4-type zinc finger
MC60_RS01955	SM01086	C-terminal, D2-small domain, of ClpB protein
MC60_RS01960	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01960	SM00464	Found in ATP-dependent protease La (LON)
MC60_RS01965	SM00411	bacterial (prokaryotic) histone like domain
MC60_RS01975	SM00382	ATPases associated with a variety of cellular activities
MC60_RS01990	SM00479	MC60_RS01990
MC60_RS01995	SM00100	Cyclic nucleotide-monophosphate binding domain
MC60_RS02030	SM00422	helix_turn_helix, mercury resistance
MC60_RS02040	SM00878	Biotin carboxylase C-terminal domain
MC60_RS02040	SM01209	MC60_RS02040
MC60_RS02085	SM00822	MC60_RS02085
MC60_RS02135	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02170	SM00267	diguanylate cyclase
MC60_RS02185	SM00822	MC60_RS02185
MC60_RS02195	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS02205	SM00518	AP endonuclease family 2
MC60_RS02235	SM00090	RIO-like kinase
MC60_RS02245	SM00486	DNA polymerase type-B family
MC60_RS02330	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS02420	SM00422	helix_turn_helix, mercury resistance
MC60_RS02430	SM00052	Putative diguanylate phosphodiesterase
MC60_RS02460	SM00028	Tetratricopeptide repeats
MC60_RS02465	SM00327	von Willebrand factor (vWF) type A domain
MC60_RS02500	SM01322	MC60_RS02500
MC60_RS02515	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02530	SM00237	Domains in Na-Ca exchangers and integrin-beta4
MC60_RS02565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS02565	SM00091	PAS domain
MC60_RS02565	SM00387	Histidine kinase-like ATPases
MC60_RS02565	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS02565	SM00448	cheY-homologous receiver domain
MC60_RS02570	SM00091	PAS domain
MC60_RS02575	SM00448	cheY-homologous receiver domain
MC60_RS02575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS02615	SM00491	MC60_RS02615
MC60_RS02640	SM00341	Helicase and RNase D C-terminal
MC60_RS02640	SM00474	3'-5' exonuclease
MC60_RS02655	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS02675	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02700	SM00421	helix_turn_helix, Lux Regulon
MC60_RS02705	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS02710	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02710	SM00487	DEAD-like helicases superfamily
MC60_RS02710	SM00490	helicase superfamily c-terminal domain
MC60_RS02710	SM00847	Helicase associated domain (HA2)  Add an annotation
MC60_RS02730	SM00448	cheY-homologous receiver domain
MC60_RS02730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS02735	SM00849	Metallo-beta-lactamase superfamily
MC60_RS02740	SM00450	Rhodanese Homology Domain
MC60_RS02770	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
MC60_RS02775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS02815	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS02820	SM00363	S4 RNA-binding domain
MC60_RS02855	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MC60_RS02860	SM00822	MC60_RS02860
MC60_RS02870	SM00825	Beta-ketoacyl synthase
MC60_RS02890	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02960	SM00382	ATPases associated with a variety of cellular activities
MC60_RS02970	SM00981	MC60_RS02970
MC60_RS03000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MC60_RS03000	SM00245	tail specific protease
MC60_RS03005	SM00945	ProQ/FINO family
MC60_RS03060	SM00100	Cyclic nucleotide-monophosphate binding domain
MC60_RS03060	SM00419	helix_turn_helix, cAMP Regulatory protein
MC60_RS03095	SM00382	ATPases associated with a variety of cellular activities
MC60_RS03115	SM00354	helix_turn _helix lactose operon repressor
MC60_RS03120	SM00267	diguanylate cyclase
MC60_RS03145	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS03145	SM00387	Histidine kinase-like ATPases
MC60_RS03145	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS03145	SM00448	cheY-homologous receiver domain
MC60_RS03150	SM00411	bacterial (prokaryotic) histone like domain
MC60_RS03155	SM00873	B3/4 domain
MC60_RS03155	SM00874	tRNA synthetase B5 domain
MC60_RS03155	SM00896	Ferredoxin-fold anticodon binding domain
MC60_RS03180	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MC60_RS03190	SM00671	Sel1-like repeats.
MC60_RS03200	SM00434	DNA Topoisomerase IV
MC60_RS03230	SM00925	MltA specific insert domain
MC60_RS03255	SM00354	helix_turn _helix lactose operon repressor
MC60_RS03270	SM00953	MC60_RS03270
MC60_RS03275	SM00487	DEAD-like helicases superfamily
MC60_RS03275	SM00490	helicase superfamily c-terminal domain
MC60_RS03280	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS03295	SM00463	Small MutS-related domain
MC60_RS03320	SM00495	Chitin-binding domain type 3
MC60_RS03330	SM00782	PhnA Zinc-Ribbon
MC60_RS03365	SM01133	MC60_RS03365
MC60_RS03505	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS03530	SM01144	MC60_RS03530
MC60_RS03540	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
MC60_RS03550	SM00487	DEAD-like helicases superfamily
MC60_RS03550	SM00490	helicase superfamily c-terminal domain
MC60_RS03575	SM01118	MC60_RS03575
MC60_RS03650	SM00382	ATPases associated with a variety of cellular activities
MC60_RS03655	SM00382	ATPases associated with a variety of cellular activities
MC60_RS03660	SM00387	Histidine kinase-like ATPases
MC60_RS03660	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS03660	SM00448	cheY-homologous receiver domain
MC60_RS03720	SM00487	DEAD-like helicases superfamily
MC60_RS03720	SM00490	helicase superfamily c-terminal domain
MC60_RS03725	SM00763	PrkA AAA domain
MC60_RS03740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS03765	SM00487	DEAD-like helicases superfamily
MC60_RS03765	SM00490	helicase superfamily c-terminal domain
MC60_RS03785	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS03805	SM00448	cheY-homologous receiver domain
MC60_RS03810	SM00387	Histidine kinase-like ATPases
MC60_RS03820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS03820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS03820	SM01049	MC60_RS03820
MC60_RS03905	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS03935	SM00267	diguanylate cyclase
MC60_RS03940	SM00052	Putative diguanylate phosphodiesterase
MC60_RS03945	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS03945	SM00871	Bacterial transcription activator, effector binding domain
MC60_RS03995	SM00420	helix_turn_helix, Deoxyribose operon repressor
MC60_RS03995	SM01134	MC60_RS03995
MC60_RS04025	SM01154	MC60_RS04025
MC60_RS04040	SM00528	Domain in histone-like proteins of HNS family
MC60_RS04065	SM01144	MC60_RS04065
MC60_RS04075	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
MC60_RS04080	SM00028	Tetratricopeptide repeats
MC60_RS04090	SM00411	bacterial (prokaryotic) histone like domain
MC60_RS04095	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS04140	SM00052	Putative diguanylate phosphodiesterase
MC60_RS04140	SM00267	diguanylate cyclase
MC60_RS04155	SM00448	cheY-homologous receiver domain
MC60_RS04160	SM00091	PAS domain
MC60_RS04185	SM00360	RNA recognition motif
MC60_RS04255	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MC60_RS04260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MC60_RS04260	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MC60_RS04300	SM01211	MC60_RS04300
MC60_RS04305	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS04320	SM00564	beta-propeller repeat
MC60_RS04340	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS04345	SM00028	Tetratricopeptide repeats
MC60_RS04355	SM00562	MC60_RS04355
MC60_RS04380	SM00271	DnaJ molecular chaperone homology domain
MC60_RS04425	SM00028	Tetratricopeptide repeats
MC60_RS04430	SM00450	Rhodanese Homology Domain
MC60_RS04445	SM01323	MC60_RS04445
MC60_RS04460	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS04495	SM00671	Sel1-like repeats.
MC60_RS04565	SM00487	DEAD-like helicases superfamily
MC60_RS04570	SM00327	von Willebrand factor (vWF) type A domain
MC60_RS04575	SM00382	ATPases associated with a variety of cellular activities
MC60_RS04640	SM00382	ATPases associated with a variety of cellular activities
MC60_RS04685	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS04690	SM00479	MC60_RS04690
MC60_RS04710	SM00052	Putative diguanylate phosphodiesterase
MC60_RS04710	SM00267	diguanylate cyclase
MC60_RS04720	SM00487	DEAD-like helicases superfamily
MC60_RS04720	SM00490	helicase superfamily c-terminal domain
MC60_RS04750	SM01091	Transporter associated domain
MC60_RS04760	SM00829	Enoylreductase
MC60_RS04825	SM00267	diguanylate cyclase
MC60_RS04830	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS04830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS04830	SM00397	Helical region found in SNAREs
MC60_RS04870	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS04915	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MC60_RS04925	SM00014	Acid phosphatase homologues
MC60_RS04955	SM00382	ATPases associated with a variety of cellular activities
MC60_RS04960	SM00267	diguanylate cyclase
MC60_RS05000	SM00327	von Willebrand factor (vWF) type A domain
MC60_RS05010	SM00052	Putative diguanylate phosphodiesterase
MC60_RS05010	SM00267	diguanylate cyclase
MC60_RS05030	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05035	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS05050	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05060	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS05085	SM01351	MC60_RS05085
MC60_RS05095	SM00487	DEAD-like helicases superfamily
MC60_RS05095	SM00490	helicase superfamily c-terminal domain
MC60_RS05120	SM00267	diguanylate cyclase
MC60_RS05125	SM00917	LeuA allosteric (dimerisation) domain
MC60_RS05130	SM00851	MGS-like domain
MC60_RS05130	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MC60_RS05135	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
MC60_RS05180	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05190	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS05200	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05215	SM00899	MC60_RS05215
MC60_RS05245	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS05260	SM00267	diguanylate cyclase
MC60_RS05280	SM00840	MC60_RS05280
MC60_RS05310	SM00829	Enoylreductase
MC60_RS05315	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS05315	SM00091	PAS domain
MC60_RS05315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS05500	SM00244	prohibitin homologues
MC60_RS05515	SM00482	DNA polymerase A domain
MC60_RS05525	SM00493	MC60_RS05525
MC60_RS05525	SM00778	Zinc-binding domain of primase-helicase
MC60_RS05550	SM01311	MC60_RS05550
MC60_RS05570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MC60_RS05570	SM00465	GIY-YIG type nucleases (URI domain)
MC60_RS05575	SM00421	helix_turn_helix, Lux Regulon
MC60_RS05575	SM00448	cheY-homologous receiver domain
MC60_RS05595	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05600	SM00849	Metallo-beta-lactamase superfamily
MC60_RS05635	SM00491	MC60_RS05635
MC60_RS05660	SM00098	Alkaline phosphatase homologues
MC60_RS05665	SM00098	Alkaline phosphatase homologues
MC60_RS05685	SM00267	diguanylate cyclase
MC60_RS05690	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS05690	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MC60_RS05700	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05725	SM01091	Transporter associated domain
MC60_RS05735	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05805	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05805	SM00448	cheY-homologous receiver domain
MC60_RS05810	SM00091	PAS domain
MC60_RS05810	SM00387	Histidine kinase-like ATPases
MC60_RS05810	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS05815	SM00382	ATPases associated with a variety of cellular activities
MC60_RS05840	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS05840	SM00924	MgtE intracellular N domain
MC60_RS05855	SM00047	Lysozyme subfamily 2
MC60_RS05900	SM00138	Methyltransferase, chemotaxis proteins 
MC60_RS05905	SM00260	Two component signalling adaptor domain
MC60_RS05905	SM00448	cheY-homologous receiver domain
MC60_RS05910	SM00858	MC60_RS05910
MC60_RS05940	SM00363	S4 RNA-binding domain
MC60_RS05945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS05985	SM00357	Cold shock protein domain
MC60_RS05995	SM00861	Transketolase, pyrimidine binding domain
MC60_RS06020	SM00487	DEAD-like helicases superfamily
MC60_RS06020	SM00490	helicase superfamily c-terminal domain
MC60_RS06125	SM00448	cheY-homologous receiver domain
MC60_RS06125	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS06130	SM00387	Histidine kinase-like ATPases
MC60_RS06170	SM00481	DNA polymerase alpha chain like domain
MC60_RS06250	SM00363	S4 RNA-binding domain
MC60_RS06270	SM00481	DNA polymerase alpha chain like domain
MC60_RS06355	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS06360	SM00382	ATPases associated with a variety of cellular activities
MC60_RS06440	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS06470	SM00028	Tetratricopeptide repeats
MC60_RS06470	SM00448	cheY-homologous receiver domain
MC60_RS06515	SM00091	PAS domain
MC60_RS06515	SM00267	diguanylate cyclase
MC60_RS06540	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MC60_RS06565	SM00354	helix_turn _helix lactose operon repressor
MC60_RS06570	SM00640	Glycosyl hydrolases family 32
MC60_RS06590	SM00271	DnaJ molecular chaperone homology domain
MC60_RS06610	SM00267	diguanylate cyclase
MC60_RS06630	SM00382	ATPases associated with a variety of cellular activities
MC60_RS06650	SM00528	Domain in histone-like proteins of HNS family
MC60_RS06670	SM01329	MC60_RS06670
MC60_RS06730	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
MC60_RS06770	SM00919	Malic enzyme, NAD binding domain
MC60_RS06770	SM01274	MC60_RS06770
MC60_RS06790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS06800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS06800	SM00091	PAS domain
MC60_RS06800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS06915	SM00448	cheY-homologous receiver domain
MC60_RS06915	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS06930	SM00382	ATPases associated with a variety of cellular activities
MC60_RS06935	SM00382	ATPases associated with a variety of cellular activities
MC60_RS06970	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07035	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07070	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS07115	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS07115	SM00091	PAS domain
MC60_RS07115	SM00387	Histidine kinase-like ATPases
MC60_RS07115	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS07115	SM00448	cheY-homologous receiver domain
MC60_RS07140	SM00091	PAS domain
MC60_RS07140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS07140	SM00387	Histidine kinase-like ATPases
MC60_RS07140	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS07140	SM00448	cheY-homologous receiver domain
MC60_RS07205	SM00155	Phospholipase D. Active site motifs.
MC60_RS07250	SM01321	MC60_RS07250
MC60_RS07265	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS07280	SM00267	diguanylate cyclase
MC60_RS07295	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS07320	SM00919	Malic enzyme, NAD binding domain
MC60_RS07320	SM01274	MC60_RS07320
MC60_RS07325	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS07340	SM00267	diguanylate cyclase
MC60_RS07385	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07400	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS07415	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07460	SM00091	PAS domain
MC60_RS07460	SM00387	Histidine kinase-like ATPases
MC60_RS07460	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS07465	SM00448	cheY-homologous receiver domain
MC60_RS07465	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS07475	SM00267	diguanylate cyclase
MC60_RS07480	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07490	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS07500	SM00448	cheY-homologous receiver domain
MC60_RS07505	SM00387	Histidine kinase-like ATPases
MC60_RS07510	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS07555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MC60_RS07555	SM00292	breast cancer carboxy-terminal domain
MC60_RS07555	SM00532	Ligase N family
MC60_RS07560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
MC60_RS07595	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS07620	SM00642	Alpha-amylase domain
MC60_RS07640	SM00421	helix_turn_helix, Lux Regulon
MC60_RS07640	SM00448	cheY-homologous receiver domain
MC60_RS07675	SM00267	diguanylate cyclase
MC60_RS07680	SM00977	TilS substrate C-terminal domain
MC60_RS07695	SM00382	ATPases associated with a variety of cellular activities
MC60_RS07730	SM00481	DNA polymerase alpha chain like domain
MC60_RS07760	SM00935	Outer membrane protein (OmpH-like)
MC60_RS07770	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MC60_RS07815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS07895	SM00028	Tetratricopeptide repeats
MC60_RS07900	SM00267	diguanylate cyclase
MC60_RS07910	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MC60_RS07910	SM00475	5'-3' exonuclease
MC60_RS07915	SM01329	MC60_RS07915
MC60_RS07945	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS07945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS07985	SM00900	MC60_RS07985
MC60_RS08105	SM00421	helix_turn_helix, Lux Regulon
MC60_RS08115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS08115	SM00387	Histidine kinase-like ATPases
MC60_RS08115	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS08120	SM00448	cheY-homologous receiver domain
MC60_RS08120	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS08150	SM00354	helix_turn _helix lactose operon repressor
MC60_RS08160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS08160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS08280	SM00422	helix_turn_helix, mercury resistance
MC60_RS08310	SM00830	Chorismate mutase type II
MC60_RS08340	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08350	SM00028	Tetratricopeptide repeats
MC60_RS08355	SM00112	Cadherin repeats.
MC60_RS08355	SM00736	Dystroglycan-type cadherin-like domains.
MC60_RS08375	SM00420	helix_turn_helix, Deoxyribose operon repressor
MC60_RS08375	SM01134	MC60_RS08375
MC60_RS08390	SM01007	Class II Aldolase and Adducin N-terminal domain
MC60_RS08415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS08415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS08445	SM00463	Small MutS-related domain
MC60_RS08455	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS08455	SM00478	endonuclease III
MC60_RS08455	SM01009	AlkA N-terminal domain
MC60_RS08520	SM00052	Putative diguanylate phosphodiesterase
MC60_RS08530	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MC60_RS08545	SM00387	Histidine kinase-like ATPases
MC60_RS08545	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS08550	SM00421	helix_turn_helix, Lux Regulon
MC60_RS08550	SM00448	cheY-homologous receiver domain
MC60_RS08570	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS08590	SM01005	Alanine racemase, C-terminal domain
MC60_RS08595	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08600	SM00978	MC60_RS08600
MC60_RS08620	SM00028	Tetratricopeptide repeats
MC60_RS08625	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08625	SM00448	cheY-homologous receiver domain
MC60_RS08635	SM00320	WD40 repeats
MC60_RS08660	SM00260	Two component signalling adaptor domain
MC60_RS08660	SM00448	cheY-homologous receiver domain
MC60_RS08670	SM00267	diguanylate cyclase
MC60_RS08700	SM00100	Cyclic nucleotide-monophosphate binding domain
MC60_RS08700	SM00419	helix_turn_helix, cAMP Regulatory protein
MC60_RS08710	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
MC60_RS08710	SM00495	Chitin-binding domain type 3
MC60_RS08710	SM00636	MC60_RS08710
MC60_RS08715	SM00387	Histidine kinase-like ATPases
MC60_RS08715	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS08715	SM00448	cheY-homologous receiver domain
MC60_RS08765	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08775	SM00984	UDP binding domain
MC60_RS08790	SM01259	MC60_RS08790
MC60_RS08810	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08825	SM00271	DnaJ molecular chaperone homology domain
MC60_RS08855	SM00650	Ribosomal RNA adenine dimethylases
MC60_RS08870	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS08880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS08915	SM00244	prohibitin homologues
MC60_RS08920	SM00244	prohibitin homologues
MC60_RS08940	SM00853	MutL C terminal dimerisation domain
MC60_RS08940	SM01340	MC60_RS08940
MC60_RS08945	SM00257	Lysin motif
MC60_RS08945	SM00646	MC60_RS08945
MC60_RS08975	SM00382	ATPases associated with a variety of cellular activities
MC60_RS08975	SM00930	MC60_RS08975
MC60_RS08990	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
MC60_RS08995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS08995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS09000	SM00052	Putative diguanylate phosphodiesterase
MC60_RS09000	SM00448	cheY-homologous receiver domain
MC60_RS09005	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS09005	SM00073	Histidine Phosphotransfer domain
MC60_RS09005	SM00387	Histidine kinase-like ATPases
MC60_RS09005	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS09005	SM00448	cheY-homologous receiver domain
MC60_RS09015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS09020	SM00073	Histidine Phosphotransfer domain
MC60_RS09020	SM00091	PAS domain
MC60_RS09020	SM00387	Histidine kinase-like ATPases
MC60_RS09020	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS09020	SM00448	cheY-homologous receiver domain
MC60_RS09065	SM01130	MC60_RS09065
MC60_RS09120	SM00014	Acid phosphatase homologues
MC60_RS09130	SM00917	LeuA allosteric (dimerisation) domain
MC60_RS09135	SM01329	MC60_RS09135
MC60_RS09170	SM00382	ATPases associated with a variety of cellular activities
MC60_RS09175	SM00670	Large family of predicted nucleotide-binding domains
MC60_RS09240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS09240	SM00387	Histidine kinase-like ATPases
MC60_RS09240	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS09245	SM00448	cheY-homologous receiver domain
MC60_RS09245	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS09255	SM00382	ATPases associated with a variety of cellular activities
MC60_RS09300	SM00267	diguanylate cyclase
MC60_RS09305	SM00487	DEAD-like helicases superfamily
MC60_RS09305	SM00490	helicase superfamily c-terminal domain
MC60_RS09315	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS09370	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS09390	SM00028	Tetratricopeptide repeats
MC60_RS09390	SM00267	diguanylate cyclase
MC60_RS09395	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS09395	SM00267	diguanylate cyclase
MC60_RS09400	SM00327	von Willebrand factor (vWF) type A domain
MC60_RS09405	SM00382	ATPases associated with a variety of cellular activities
MC60_RS09450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS09500	SM00344	helix_turn_helix ASNC type
MC60_RS09515	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS09520	SM00829	Enoylreductase
MC60_RS09535	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS09535	SM00871	Bacterial transcription activator, effector binding domain
MC60_RS09545	SM00642	Alpha-amylase domain
MC60_RS09550	SM00642	Alpha-amylase domain
MC60_RS09560	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MC60_RS09575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS09575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS09705	SM00382	ATPases associated with a variety of cellular activities
MC60_RS09710	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MC60_RS09715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS09715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS09725	SM00479	MC60_RS09725
MC60_RS09730	SM00822	MC60_RS09730
MC60_RS09770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS09775	SM00487	DEAD-like helicases superfamily
MC60_RS09775	SM00490	helicase superfamily c-terminal domain
MC60_RS09790	SM00642	Alpha-amylase domain
MC60_RS09810	SM00028	Tetratricopeptide repeats
MC60_RS09890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS09890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS09890	SM01049	MC60_RS09890
MC60_RS09905	SM00382	ATPases associated with a variety of cellular activities
MC60_RS09960	SM00487	DEAD-like helicases superfamily
MC60_RS09960	SM00490	helicase superfamily c-terminal domain
MC60_RS09975	SM00052	Putative diguanylate phosphodiesterase
MC60_RS09975	SM00267	diguanylate cyclase
MC60_RS09990	SM00883	Chaperonin 10 Kd subunit
MC60_RS10030	SM00829	Enoylreductase
MC60_RS10100	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MC60_RS10105	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS10105	SM00357	Cold shock protein domain
MC60_RS10105	SM00955	MC60_RS10105
MC60_RS10110	SM00267	diguanylate cyclase
MC60_RS10125	SM00938	Nitrogen regulatory protein P-II
MC60_RS10190	SM00904	Riboflavin kinase
MC60_RS10205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MC60_RS10235	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS10245	SM00927	DNA mismatch repair enzyme MutH
MC60_RS10275	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10275	SM00962	SRP54-type protein, GTPase domain
MC60_RS10275	SM00963	SRP54-type protein, helical bundle domain
MC60_RS10285	SM01091	Transporter associated domain
MC60_RS10300	SM00671	Sel1-like repeats.
MC60_RS10320	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS10320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MC60_RS10325	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10340	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10355	SM00938	Nitrogen regulatory protein P-II
MC60_RS10425	SM01152	MC60_RS10425
MC60_RS10445	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10460	SM00487	DEAD-like helicases superfamily
MC60_RS10460	SM00490	helicase superfamily c-terminal domain
MC60_RS10505	SM00411	bacterial (prokaryotic) histone like domain
MC60_RS10520	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS10545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS10545	SM00091	PAS domain
MC60_RS10545	SM00267	diguanylate cyclase
MC60_RS10565	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
MC60_RS10570	SM01133	MC60_RS10570
MC60_RS10605	SM01126	MC60_RS10605
MC60_RS10655	SM01091	Transporter associated domain
MC60_RS10710	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MC60_RS10720	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10735	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
MC60_RS10735	SM00534	ATPase domain of DNA mismatch repair MUTS family
MC60_RS10750	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS10790	SM00382	ATPases associated with a variety of cellular activities
MC60_RS10810	SM00986	Uracil DNA glycosylase superfamily
MC60_RS10810	SM00987	UreE urease accessory protein, C-terminal domain 
MC60_RS10820	SM00465	GIY-YIG type nucleases (URI domain)
MC60_RS10840	SM00563	Phosphate acyltransferases
MC60_RS10870	SM00271	DnaJ molecular chaperone homology domain
MC60_RS10905	SM00434	DNA Topoisomerase IV
MC60_RS10910	SM00387	Histidine kinase-like ATPases
MC60_RS10910	SM00433	TopoisomeraseII
MC60_RS10985	SM00421	helix_turn_helix, Lux Regulon
MC60_RS11000	SM00357	Cold shock protein domain
MC60_RS11000	SM00955	MC60_RS11000
MC60_RS11060	SM00487	DEAD-like helicases superfamily
MC60_RS11060	SM00490	helicase superfamily c-terminal domain
MC60_RS11105	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MC60_RS11215	SM00642	Alpha-amylase domain
MC60_RS11230	SM00344	helix_turn_helix ASNC type
MC60_RS11250	SM00852	Probable molybdopterin binding domain
MC60_RS11315	SM01219	MC60_RS11315
MC60_RS11415	SM00267	diguanylate cyclase
MC60_RS11435	SM00876	Biotin and Thiamin Synthesis associated domain
MC60_RS11475	SM00448	cheY-homologous receiver domain
MC60_RS11475	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS11480	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS11495	SM01018	B12 binding domain
MC60_RS11560	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS11630	SM00382	ATPases associated with a variety of cellular activities
MC60_RS11645	SM00965	Secretin and TonB N terminus short domain
MC60_RS11675	SM00052	Putative diguanylate phosphodiesterase
MC60_RS11675	SM00267	diguanylate cyclase
MC60_RS11680	SM00052	Putative diguanylate phosphodiesterase
MC60_RS11710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS11710	SM00866	MC60_RS11710
MC60_RS11715	SM00947	Carbonic anhydrase
MC60_RS11730	SM00382	ATPases associated with a variety of cellular activities
MC60_RS11735	SM00382	ATPases associated with a variety of cellular activities
MC60_RS11735	SM00962	SRP54-type protein, GTPase domain
MC60_RS11735	SM00963	SRP54-type protein, helical bundle domain
MC60_RS11765	SM00155	Phospholipase D. Active site motifs.
MC60_RS11770	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS11860	SM00822	MC60_RS11860
MC60_RS11930	SM00662	RNA polymerases D
MC60_RS11935	SM00363	S4 RNA-binding domain
MC60_RS11935	SM01390	MC60_RS11935
MC60_RS12005	SM01374	MC60_RS12005
MC60_RS12025	SM00322	K homology RNA-binding domain
MC60_RS12040	SM01382	MC60_RS12040
MC60_RS12040	SM01383	MC60_RS12040
MC60_RS12060	SM01403	MC60_RS12060
MC60_RS12070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS12070	SM00387	Histidine kinase-like ATPases
MC60_RS12070	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS12075	SM00448	cheY-homologous receiver domain
MC60_RS12075	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS12085	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS12085	SM00732	Likely ribonuclease with RNase H fold.
MC60_RS12125	SM00450	Rhodanese Homology Domain
MC60_RS12145	SM00354	helix_turn _helix lactose operon repressor
MC60_RS12155	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS12180	SM00155	Phospholipase D. Active site motifs.
MC60_RS12185	SM00487	DEAD-like helicases superfamily
MC60_RS12185	SM00490	helicase superfamily c-terminal domain
MC60_RS12220	SM01230	MC60_RS12220
MC60_RS12230	SM00091	PAS domain
MC60_RS12230	SM00387	Histidine kinase-like ATPases
MC60_RS12230	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS12235	SM00382	ATPases associated with a variety of cellular activities
MC60_RS12235	SM00448	cheY-homologous receiver domain
MC60_RS12245	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS12300	SM00257	Lysin motif
MC60_RS12375	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS12390	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS12435	SM00326	Src homology 3 domains
MC60_RS12450	SM01321	MC60_RS12450
MC60_RS12480	SM00382	ATPases associated with a variety of cellular activities
MC60_RS12500	SM00829	Enoylreductase
MC60_RS12550	SM01038	Beta galactosidase small chain
MC60_RS12555	SM00354	helix_turn _helix lactose operon repressor
MC60_RS12595	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MC60_RS12595	SM00474	3'-5' exonuclease
MC60_RS12595	SM00475	5'-3' exonuclease
MC60_RS12595	SM00482	DNA polymerase A domain
MC60_RS12615	SM00971	Serine acetyltransferase, N-terminal
MC60_RS12625	SM00448	cheY-homologous receiver domain
MC60_RS12625	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS12630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS12630	SM00387	Histidine kinase-like ATPases
MC60_RS12630	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS12660	SM00563	Phosphate acyltransferases
MC60_RS12695	SM00354	helix_turn _helix lactose operon repressor
MC60_RS12755	SM00829	Enoylreductase
MC60_RS12765	SM00052	Putative diguanylate phosphodiesterase
MC60_RS12765	SM00267	diguanylate cyclase
MC60_RS12820	SM00360	RNA recognition motif
MC60_RS12835	SM01001	AIR carboxylase
MC60_RS12850	SM00448	cheY-homologous receiver domain
MC60_RS12850	SM00850	LytTr DNA-binding domain
MC60_RS12855	SM00387	Histidine kinase-like ATPases
MC60_RS12865	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS12865	SM00387	Histidine kinase-like ATPases
MC60_RS12865	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS12865	SM00448	cheY-homologous receiver domain
MC60_RS12870	SM00421	helix_turn_helix, Lux Regulon
MC60_RS12870	SM00448	cheY-homologous receiver domain
MC60_RS12920	SM00267	diguanylate cyclase
MC60_RS12970	SM00267	diguanylate cyclase
MC60_RS12990	SM00072	Guanylate kinase homologues.
MC60_RS12995	SM01409	MC60_RS12995
MC60_RS13000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS13000	SM00954	Region found in RelA / SpoT proteins
MC60_RS13025	SM00458	Ricin-type beta-trefoil
MC60_RS13065	SM00091	PAS domain
MC60_RS13065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS13065	SM00387	Histidine kinase-like ATPases
MC60_RS13095	SM00387	Histidine kinase-like ATPases
MC60_RS13095	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS13100	SM00448	cheY-homologous receiver domain
MC60_RS13100	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS13110	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS13140	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS13145	SM00387	Histidine kinase-like ATPases
MC60_RS13145	SM00433	TopoisomeraseII
MC60_RS13155	SM00480	DNA polymerase III beta subunit
MC60_RS13160	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13160	SM00760	Bacterial dnaA protein helix-turn-helix domain
MC60_RS13165	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS13175	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13190	SM01234	MC60_RS13190
MC60_RS13250	SM00857	Resolvase, N terminal domain
MC60_RS13255	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS13275	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13280	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13295	SM01228	MC60_RS13295
MC60_RS13310	SM00470	ParB-like nuclease domain
MC60_RS13350	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13375	SM00387	Histidine kinase-like ATPases
MC60_RS13375	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS13380	SM00448	cheY-homologous receiver domain
MC60_RS13380	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS13385	SM00420	helix_turn_helix, Deoxyribose operon repressor
MC60_RS13385	SM01134	MC60_RS13385
MC60_RS13395	SM00421	helix_turn_helix, Lux Regulon
MC60_RS13500	SM01004	Delta-aminolevulinic acid dehydratase
MC60_RS13510	SM00052	Putative diguanylate phosphodiesterase
MC60_RS13510	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS13510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS13510	SM00091	PAS domain
MC60_RS13510	SM00267	diguanylate cyclase
MC60_RS13530	SM00487	DEAD-like helicases superfamily
MC60_RS13530	SM00490	helicase superfamily c-terminal domain
MC60_RS13540	SM00357	Cold shock protein domain
MC60_RS13540	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13540	SM00959	Rho termination factor, N-terminal domain
MC60_RS13575	SM00450	Rhodanese Homology Domain
MC60_RS13585	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS13590	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13595	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13615	SM00354	helix_turn _helix lactose operon repressor
MC60_RS13620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS13620	SM00382	ATPases associated with a variety of cellular activities
MC60_RS13625	SM00849	Metallo-beta-lactamase superfamily
MC60_RS13675	SM00052	Putative diguanylate phosphodiesterase
MC60_RS13685	SM00836	DALR anticodon binding domain
MC60_RS13750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS13750	SM00387	Histidine kinase-like ATPases
MC60_RS13750	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS13755	SM00448	cheY-homologous receiver domain
MC60_RS13755	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS13820	SM00881	CoA binding domain
MC60_RS13895	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MC60_RS13895	SM01232	MC60_RS13895
MC60_RS13955	SM00422	helix_turn_helix, mercury resistance
MC60_RS13960	SM00267	diguanylate cyclase
MC60_RS14005	SM00563	Phosphate acyltransferases
MC60_RS14010	SM00563	Phosphate acyltransferases
MC60_RS14015	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14065	SM00487	DEAD-like helicases superfamily
MC60_RS14065	SM00490	helicase superfamily c-terminal domain
MC60_RS14080	SM00919	Malic enzyme, NAD binding domain
MC60_RS14080	SM01274	MC60_RS14080
MC60_RS14090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS14090	SM00387	Histidine kinase-like ATPases
MC60_RS14090	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS14095	SM00448	cheY-homologous receiver domain
MC60_RS14095	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS14115	SM00642	Alpha-amylase domain
MC60_RS14160	SM01230	MC60_RS14160
MC60_RS14180	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14215	SM00341	Helicase and RNase D C-terminal
MC60_RS14215	SM00487	DEAD-like helicases superfamily
MC60_RS14215	SM00490	helicase superfamily c-terminal domain
MC60_RS14215	SM00956	MC60_RS14215
MC60_RS14245	SM00924	MgtE intracellular N domain
MC60_RS14280	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14305	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14305	SM01086	C-terminal, D2-small domain, of ClpB protein
MC60_RS14320	SM00836	DALR anticodon binding domain
MC60_RS14320	SM01016	Arginyl tRNA synthetase N terminal dom
MC60_RS14325	SM00464	Found in ATP-dependent protease La (LON)
MC60_RS14370	SM00354	helix_turn _helix lactose operon repressor
MC60_RS14375	SM01038	Beta galactosidase small chain
MC60_RS14385	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS14395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS14455	SM01118	MC60_RS14455
MC60_RS14460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS14460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS14475	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS14485	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MC60_RS14485	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MC60_RS14510	SM00363	S4 RNA-binding domain
MC60_RS14520	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14520	SM01086	C-terminal, D2-small domain, of ClpB protein
MC60_RS14525	SM00849	Metallo-beta-lactamase superfamily
MC60_RS14535	SM00344	helix_turn_helix ASNC type
MC60_RS14540	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS14545	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS14565	SM00387	Histidine kinase-like ATPases
MC60_RS14565	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS14575	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14575	SM00448	cheY-homologous receiver domain
MC60_RS14610	SM00448	cheY-homologous receiver domain
MC60_RS14610	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS14615	SM00387	Histidine kinase-like ATPases
MC60_RS14635	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
MC60_RS14635	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
MC60_RS14635	SM00493	MC60_RS14635
MC60_RS14690	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
MC60_RS14690	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
MC60_RS14695	SM00649	Ribosomal protein L11/L12
MC60_RS14720	SM00663	RNA polymerase I subunit A N-terminus
MC60_RS14760	SM00838	Elongation factor G C-terminus
MC60_RS14760	SM00889	Elongation factor G, domain IV
MC60_RS14815	SM01120	MC60_RS14815
MC60_RS14825	SM00091	PAS domain
MC60_RS14855	SM00822	MC60_RS14855
MC60_RS14865	SM00014	Acid phosphatase homologues
MC60_RS14890	SM01060	MC60_RS14890
MC60_RS14900	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS14900	SM00871	Bacterial transcription activator, effector binding domain
MC60_RS14915	SM00267	diguanylate cyclase
MC60_RS14925	SM00382	ATPases associated with a variety of cellular activities
MC60_RS14950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS14950	SM00866	MC60_RS14950
MC60_RS14955	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS15005	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS15015	SM00938	Nitrogen regulatory protein P-II
MC60_RS15020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS15020	SM00267	diguanylate cyclase
MC60_RS15030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS15040	SM00448	cheY-homologous receiver domain
MC60_RS15040	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS15045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS15045	SM00387	Histidine kinase-like ATPases
MC60_RS15045	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS15050	SM00357	Cold shock protein domain
MC60_RS15065	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS15075	SM00421	helix_turn_helix, Lux Regulon
MC60_RS15090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS15090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS15120	SM00530	Helix-turn-helix XRE-family like proteins 
MC60_RS15200	SM00382	ATPases associated with a variety of cellular activities
MC60_RS15205	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS15225	SM00382	ATPases associated with a variety of cellular activities
MC60_RS15300	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MC60_RS15305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MC60_RS15355	SM00749	bacterial OsmY and nodulation domain
MC60_RS15420	SM00382	ATPases associated with a variety of cellular activities
MC60_RS15420	SM00448	cheY-homologous receiver domain
MC60_RS15465	SM00858	MC60_RS15465
MC60_RS15655	SM00842	Cell division protein FtsA
MC60_RS15660	SM00864	Tubulin/FtsZ family, GTPase domain
MC60_RS15660	SM00865	Tubulin/FtsZ family, C-terminal domain
MC60_RS15675	SM00957	SecA DEAD-like domain
MC60_RS15675	SM00958	SecA preprotein cross-linking domain
MC60_RS15735	SM00644	MC60_RS15735
MC60_RS15745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS15745	SM00895	MC60_RS15745
MC60_RS15770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS15770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS15775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS15775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS15790	SM00052	Putative diguanylate phosphodiesterase
MC60_RS15810	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MC60_RS15830	SM00905	Dihydroneopterin aldolase
MC60_RS15835	SM01207	MC60_RS15835
MC60_RS15885	SM00344	helix_turn_helix ASNC type
MC60_RS15890	SM01266	MC60_RS15890
MC60_RS15895	SM00642	Alpha-amylase domain
MC60_RS15905	SM00354	helix_turn _helix lactose operon repressor
MC60_RS15955	SM00354	helix_turn _helix lactose operon repressor
MC60_RS15965	SM00870	MC60_RS15965
MC60_RS15980	SM00851	MGS-like domain
MC60_RS16065	SM00382	ATPases associated with a variety of cellular activities
MC60_RS16135	SM01130	MC60_RS16135
MC60_RS16140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS16140	SM00267	diguanylate cyclase
MC60_RS16195	SM00478	endonuclease III
MC60_RS16205	SM00382	ATPases associated with a variety of cellular activities
MC60_RS16225	SM01118	MC60_RS16225
MC60_RS16245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS16245	SM00895	MC60_RS16245
MC60_RS16260	SM00363	S4 RNA-binding domain
MC60_RS16275	SM00382	ATPases associated with a variety of cellular activities
MC60_RS16330	SM00421	helix_turn_helix, Lux Regulon
MC60_RS16375	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS16420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS16430	SM00450	Rhodanese Homology Domain
MC60_RS16445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MC60_RS16445	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS16445	SM00091	PAS domain
MC60_RS16445	SM00267	diguanylate cyclase
MC60_RS16460	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MC60_RS16510	SM01266	MC60_RS16510
MC60_RS16520	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS16525	SM00382	ATPases associated with a variety of cellular activities
MC60_RS16560	SM00822	MC60_RS16560
MC60_RS16575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS16575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS16585	SM00287	Bacterial SH3 domain homologues
MC60_RS16605	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MC60_RS16705	SM00358	Double-stranded RNA binding motif
MC60_RS16705	SM00535	Ribonuclease III family
MC60_RS16725	SM00644	MC60_RS16725
MC60_RS16735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS16735	SM00387	Histidine kinase-like ATPases
MC60_RS16735	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS16735	SM00448	cheY-homologous receiver domain
MC60_RS16745	SM00954	Region found in RelA / SpoT proteins
MC60_RS16760	SM01192	MC60_RS16760
MC60_RS16760	SM01193	MC60_RS16760
MC60_RS16800	SM00257	Lysin motif
MC60_RS16825	SM00400	zinc finger
MC60_RS16825	SM00493	MC60_RS16825
MC60_RS16825	SM00766	DNA primase DnaG DnaB-binding
MC60_RS16870	SM00778	Zinc-binding domain of primase-helicase
MC60_RS16905	SM00028	Tetratricopeptide repeats
MC60_RS16910	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
MC60_RS16910	SM00632	MC60_RS16910
MC60_RS16910	SM00642	Alpha-amylase domain
MC60_RS16925	SM01209	MC60_RS16925
MC60_RS16925	SM01210	MC60_RS16925
MC60_RS16930	SM00798	AICARFT/IMPCHase bienzyme
MC60_RS16930	SM00851	MGS-like domain
MC60_RS16935	SM00422	helix_turn_helix, mercury resistance
MC60_RS16950	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS16980	SM00244	prohibitin homologues
MC60_RS17025	SM00091	PAS domain
MC60_RS17025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS17045	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17100	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17155	SM00487	DEAD-like helicases superfamily
MC60_RS17155	SM00490	helicase superfamily c-terminal domain
MC60_RS17155	SM00847	Helicase associated domain (HA2)  Add an annotation
MC60_RS17190	SM00014	Acid phosphatase homologues
MC60_RS17285	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17295	SM00448	cheY-homologous receiver domain
MC60_RS17310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MC60_RS17345	SM00564	beta-propeller repeat
MC60_RS17345	SM00710	Parallel beta-helix repeats
MC60_RS17365	SM00327	von Willebrand factor (vWF) type A domain
MC60_RS17430	SM00422	helix_turn_helix, mercury resistance
MC60_RS17465	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17470	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS17480	SM00260	Two component signalling adaptor domain
MC60_RS17480	SM00448	cheY-homologous receiver domain
MC60_RS17490	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17505	SM00052	Putative diguanylate phosphodiesterase
MC60_RS17535	SM00450	Rhodanese Homology Domain
MC60_RS17575	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17690	SM00052	Putative diguanylate phosphodiesterase
MC60_RS17690	SM00091	PAS domain
MC60_RS17690	SM00267	diguanylate cyclase
MC60_RS17725	SM00479	MC60_RS17725
MC60_RS17765	SM00357	Cold shock protein domain
MC60_RS17775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS17775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS17825	SM00495	Chitin-binding domain type 3
MC60_RS17825	SM00636	MC60_RS17825
MC60_RS17830	SM00028	Tetratricopeptide repeats
MC60_RS17880	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17885	SM00382	ATPases associated with a variety of cellular activities
MC60_RS17920	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
MC60_RS17950	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MC60_RS17960	SM01012	MC60_RS17960
MC60_RS17975	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18000	SM01057	Eukaryotic-type carbonic anhydrase
MC60_RS18005	SM00477	DNA/RNA non-specific endonuclease
MC60_RS18005	SM00892	DNA/RNA non-specific endonuclease
MC60_RS18015	SM00852	Probable molybdopterin binding domain
MC60_RS18040	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS18085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS18095	SM00870	MC60_RS18095
MC60_RS18105	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MC60_RS18135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS18140	SM01266	MC60_RS18140
MC60_RS18150	SM00829	Enoylreductase
MC60_RS18175	SM00878	Biotin carboxylase C-terminal domain
MC60_RS18195	SM00052	Putative diguanylate phosphodiesterase
MC60_RS18195	SM00091	PAS domain
MC60_RS18195	SM00267	diguanylate cyclase
MC60_RS18270	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18290	SM00861	Transketolase, pyrimidine binding domain
MC60_RS18325	SM01103	MC60_RS18325
MC60_RS18335	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18375	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS18395	SM01387	MC60_RS18395
MC60_RS18400	SM00316	Ribosomal protein S1-like RNA-binding domain
MC60_RS18400	SM00322	K homology RNA-binding domain
MC60_RS18475	SM00422	helix_turn_helix, mercury resistance
MC60_RS18510	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18525	SM00387	Histidine kinase-like ATPases
MC60_RS18545	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS18560	SM00936	Penicillin-binding protein 5, C-terminal domain 
MC60_RS18625	SM00116	Domain in cystathionine beta-synthase and other proteins.
MC60_RS18625	SM01091	Transporter associated domain
MC60_RS18640	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS18670	SM00267	diguanylate cyclase
MC60_RS18680	SM00267	diguanylate cyclase
MC60_RS18710	SM00382	ATPases associated with a variety of cellular activities
MC60_RS18720	SM00841	Elongation factor P, C-terminal
MC60_RS18720	SM01185	MC60_RS18720
MC60_RS18730	SM01240	MC60_RS18730
MC60_RS18740	SM00387	Histidine kinase-like ATPases
MC60_RS18740	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS18745	SM00448	cheY-homologous receiver domain
MC60_RS18745	SM00862	Transcriptional regulatory protein, C terminal
MC60_RS18760	SM01236	MC60_RS18760
MC60_RS18815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS18815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS18855	SM00849	Metallo-beta-lactamase superfamily
MC60_RS18875	SM00842	Cell division protein FtsA
MC60_RS18895	SM00965	Secretin and TonB N terminus short domain
MC60_RS18960	SM01150	MC60_RS18960
MC60_RS18990	SM01022	MC60_RS18990
MC60_RS19050	SM01400	MC60_RS19050
MC60_RS19075	SM00937	MC60_RS19075
MC60_RS19110	SM00986	Uracil DNA glycosylase superfamily
MC60_RS19110	SM00987	UreE urease accessory protein, C-terminal domain 
MC60_RS19150	SM00732	Likely ribonuclease with RNase H fold.
MC60_RS19175	SM00731	SprT homologues.
MC60_RS19185	SM00861	Transketolase, pyrimidine binding domain
MC60_RS19230	SM00342	helix_turn_helix, arabinose operon control protein
MC60_RS19240	SM00788	Adenylosuccinate synthetase
MC60_RS19285	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
MC60_RS19285	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
MC60_RS19285	SM00493	MC60_RS19285
MC60_RS19295	SM00091	PAS domain
MC60_RS19295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS19315	SM00382	ATPases associated with a variety of cellular activities
MC60_RS19320	SM00382	ATPases associated with a variety of cellular activities
MC60_RS19340	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS19345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS19350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MC60_RS19395	SM00382	ATPases associated with a variety of cellular activities
MC60_RS19455	SM00382	ATPases associated with a variety of cellular activities
MC60_RS19455	SM00962	SRP54-type protein, GTPase domain
MC60_RS19470	SM00448	cheY-homologous receiver domain
MC60_RS19480	SM00073	Histidine Phosphotransfer domain
MC60_RS19480	SM00260	Two component signalling adaptor domain
MC60_RS19480	SM00387	Histidine kinase-like ATPases
MC60_RS19480	SM01231	MC60_RS19480
MC60_RS19485	SM00448	cheY-homologous receiver domain
MC60_RS19505	SM00260	Two component signalling adaptor domain
MC60_RS19510	SM00260	Two component signalling adaptor domain
MC60_RS19520	SM00382	ATPases associated with a variety of cellular activities
MC60_RS19705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS19705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS19720	SM01091	Transporter associated domain
MC60_RS19780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS19790	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS19790	SM00876	Biotin and Thiamin Synthesis associated domain
MC60_RS19825	SM00890	Domain of unknown function
MC60_RS19970	SM01081	Putative carbohydrate binding domain
MC60_RS20025	SM00347	helix_turn_helix multiple antibiotic resistance protein
MC60_RS20040	SM00382	ATPases associated with a variety of cellular activities
MC60_RS20110	SM00052	Putative diguanylate phosphodiesterase
MC60_RS20110	SM00267	diguanylate cyclase
MC60_RS20120	SM00354	helix_turn _helix lactose operon repressor
MC60_RS20145	SM00257	Lysin motif
MC60_RS20150	SM00849	Metallo-beta-lactamase superfamily
MC60_RS20165	SM00479	MC60_RS20165
MC60_RS20175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MC60_RS20205	SM00897	FIST N domain
MC60_RS20205	SM01204	MC60_RS20205
MC60_RS20210	SM00387	Histidine kinase-like ATPases
MC60_RS20210	SM00388	His Kinase A (phosphoacceptor) domain
MC60_RS20210	SM00448	cheY-homologous receiver domain
MC60_RS20215	SM00464	Found in ATP-dependent protease La (LON)
MC60_RS20225	SM00421	helix_turn_helix, Lux Regulon
MC60_RS20225	SM00448	cheY-homologous receiver domain
MC60_RS20230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS20230	SM00387	Histidine kinase-like ATPases
MC60_RS20235	SM00729	Elongator protein 3, MiaB family, Radical SAM
MC60_RS20250	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MC60_RS20275	SM00852	Probable molybdopterin binding domain
MC60_RS20305	SM00382	ATPases associated with a variety of cellular activities
MC60_RS20330	SM00852	Probable molybdopterin binding domain
MC60_RS20340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MC60_RS20340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MC60_RS20360	SM00867	YceI-like domain 
MC60_RS20370	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
MC60_RS20380	SM00563	Phosphate acyltransferases
MC60_RS20410	SM00052	Putative diguanylate phosphodiesterase
MC60_RS20410	SM00267	diguanylate cyclase
MC60_RS20415	SM00855	Phosphoglycerate mutase family
MC60_RS20435	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
MC60_RS20440	SM00363	S4 RNA-binding domain
MC60_RS20460	SM00871	Bacterial transcription activator, effector binding domain
MC60_RS20485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MC60_RS20555	SM00420	helix_turn_helix, Deoxyribose operon repressor
MC60_RS20555	SM01134	MC60_RS20555
MC60_RS20580	SM00830	Chorismate mutase type II
MC60_RS20655	SM00382	ATPases associated with a variety of cellular activities
MC60_RS20720	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS20720	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MC60_RS20735	SM00382	ATPases associated with a variety of cellular activities
MC60_RS20740	SM00062	Bacterial periplasmic substrate-binding proteins
MC60_RS20740	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MC60_RS20765	SM00052	Putative diguanylate phosphodiesterase
MC60_RS20765	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MC60_RS20765	SM00091	PAS domain
MC60_RS20765	SM00267	diguanylate cyclase
MC60_RS20770	SM00450	Rhodanese Homology Domain
