locus-tag class description LDN97_RS00005 PF00308 Bacterial dnaA protein LDN97_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LDN97_RS00005 PF11638 DnaA N-terminal domain LDN97_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDN97_RS00010 PF02767 DNA polymerase III beta subunit, central domain LDN97_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDN97_RS00015 PF02463 RecF/RecN/SMC N terminal domain LDN97_RS00020 PF00204 DNA gyrase B LDN97_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LDN97_RS00020 PF18053 DNA gyrase B subunit insert domain LDN97_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00020 PF01751 Toprim domain LDN97_RS00025 PF02311 AraC-like ligand binding domain LDN97_RS00025 PF12833 Helix-turn-helix domain LDN97_RS00030 PF12706 Beta-lactamase superfamily domain LDN97_RS00035 PF00011 Hsp20/alpha crystallin family LDN97_RS00040 PF00011 Hsp20/alpha crystallin family LDN97_RS00045 PF00155 Aminotransferase class I and II LDN97_RS00060 PF07690 Major Facilitator Superfamily LDN97_RS00065 PF00072 Response regulator receiver domain LDN97_RS00065 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS00070 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00070 PF02702 Osmosensitive K+ channel His kinase sensor domain LDN97_RS00070 PF13493 Domain of unknown function (DUF4118) LDN97_RS00070 PF13492 GAF domain LDN97_RS00075 PF02669 K+-transporting ATPase, c chain LDN97_RS00085 PF03814 Potassium-transporting ATPase A subunit LDN97_RS00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDN97_RS00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00095 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS00100 PF00873 AcrB/AcrD/AcrF family LDN97_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS00150 PF12146 Serine aminopeptidase, S33 LDN97_RS00155 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS00160 PF12105 SpoU, rRNA methylase, C-terminal LDN97_RS00160 PF00588 SpoU rRNA Methylase family LDN97_RS00165 PF13291 ACT domain LDN97_RS00165 PF04607 Region found in RelA / SpoT proteins LDN97_RS00165 PF02824 TGS domain LDN97_RS00170 PF01192 RNA polymerase Rpb6 LDN97_RS00175 PF00625 Guanylate kinase LDN97_RS00180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDN97_RS00195 PF00892 EamA-like transporter family LDN97_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS00215 PF03466 LysR substrate binding domain LDN97_RS00220 PF00579 tRNA synthetases class I (W and Y) LDN97_RS00225 PF00582 Universal stress protein family LDN97_RS00230 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LDN97_RS00230 PF12241 Trans-2-enoyl-CoA reductase catalytic region LDN97_RS00230 PF07055 Enoyl reductase FAD binding domain LDN97_RS00235 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS00235 PF05230 MASE2 domain LDN97_RS00240 PF00210 Ferritin-like domain LDN97_RS00250 PF07690 Major Facilitator Superfamily LDN97_RS00255 PF01810 LysE type translocator LDN97_RS00280 PF15976 CS1-pili formation C-terminal LDN97_RS00280 PF16967 E-set like domain LDN97_RS00285 PF18649 EcpB C-terminal domain LDN97_RS00290 PF16449 Fimbrillin MatB LDN97_RS00295 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS00295 PF00072 Response regulator receiver domain LDN97_RS00300 PF01627 Hpt domain LDN97_RS00300 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00300 PF00989 PAS fold LDN97_RS00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS00300 PF00072 Response regulator receiver domain LDN97_RS00310 PF07694 5TMR of 5TMR-LYT LDN97_RS00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00310 PF06580 Histidine kinase LDN97_RS00315 PF04397 LytTr DNA-binding domain LDN97_RS00315 PF00072 Response regulator receiver domain LDN97_RS00320 PF07690 Major Facilitator Superfamily LDN97_RS00325 PF02222 ATP-grasp domain LDN97_RS00325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDN97_RS00330 PF00731 AIR carboxylase LDN97_RS00335 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS00335 PF00593 TonB dependent receptor LDN97_RS00340 PF01177 Asp/Glu/Hydantoin racemase LDN97_RS00380 PF00899 ThiF family LDN97_RS00385 PF02657 Fe-S metabolism associated domain LDN97_RS00390 PF00266 Aminotransferase class-V LDN97_RS00395 PF13361 UvrD-like helicase C-terminal domain LDN97_RS00395 PF00580 UvrD/REP helicase N-terminal domain LDN97_RS00400 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS00400 PF00563 EAL domain LDN97_RS00400 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS00405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LDN97_RS00410 PF00107 Zinc-binding dehydrogenase LDN97_RS00410 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS00415 PF00155 Aminotransferase class I and II LDN97_RS00420 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS00420 PF08360 QacR-like protein, C-terminal region LDN97_RS00425 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS00440 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LDN97_RS00455 PF03611 PTS system sugar-specific permease component LDN97_RS00465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDN97_RS00470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDN97_RS00470 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS00485 PF03748 Flagellar basal body-associated protein FliL LDN97_RS00490 PF04345 Chorismate lyase LDN97_RS00495 PF01040 UbiA prenyltransferase family LDN97_RS00500 PF01553 Acyltransferase LDN97_RS00505 PF01726 LexA DNA binding domain LDN97_RS00505 PF00717 Peptidase S24-like LDN97_RS00515 PF02630 SCO1/SenC LDN97_RS00520 PF01554 MatE LDN97_RS00525 PF00588 SpoU rRNA Methylase family LDN97_RS00530 PF00672 HAMP domain LDN97_RS00530 PF16527 Two-component sensor protein CpxA, periplasmic domain LDN97_RS00530 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00535 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS00535 PF00072 Response regulator receiver domain LDN97_RS00540 PF01545 Cation efflux family LDN97_RS00540 PF16916 Dimerisation domain of Zinc Transporter LDN97_RS00545 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS00545 PF06426 Serine acetyltransferase, N-terminal LDN97_RS00555 PF06005 Cell division protein ZapB LDN97_RS00565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDN97_RS00565 PF00476 DNA polymerase family A LDN97_RS00565 PF01367 5'-3' exonuclease, C-terminal SAM fold LDN97_RS00565 PF01612 3'-5' exonuclease LDN97_RS00570 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS00610 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS00615 PF02929 Beta galactosidase small chain LDN97_RS00615 PF16353 Domain of unknown function(DUF4981) LDN97_RS00615 PF00703 Glycosyl hydrolases family 2 LDN97_RS00615 PF02837 Glycosyl hydrolases family 2, sugar binding domain LDN97_RS00615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LDN97_RS00620 PF04074 YhcH/YjgK/YiaL LDN97_RS00625 PF13520 Amino acid permease LDN97_RS00630 PF01588 Putative tRNA binding domain LDN97_RS00635 PF13520 Amino acid permease LDN97_RS00640 PF13593 SBF-like CPA transporter family (DUF4137) LDN97_RS00645 PF03781 Sulfatase-modifying factor enzyme 1 LDN97_RS00645 PF12867 DinB superfamily LDN97_RS00660 PF00756 Putative esterase LDN97_RS00665 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS00665 PF00107 Zinc-binding dehydrogenase LDN97_RS00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS00670 PF03466 LysR substrate binding domain LDN97_RS00675 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS00680 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS00685 PF00005 ABC transporter LDN97_RS00690 PF02608 ABC transporter substrate-binding protein PnrA-like LDN97_RS00695 PF13361 UvrD-like helicase C-terminal domain LDN97_RS00695 PF00580 UvrD/REP helicase N-terminal domain LDN97_RS00700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDN97_RS00715 PF03466 LysR substrate binding domain LDN97_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS00730 PF14001 YdfZ protein LDN97_RS00750 PF06206 CpeT/CpcT family (DUF1001) LDN97_RS00755 PF01810 LysE type translocator LDN97_RS00760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LDN97_RS00760 PF12833 Helix-turn-helix domain LDN97_RS00765 PF00892 EamA-like transporter family LDN97_RS00775 PF00171 Aldehyde dehydrogenase family LDN97_RS00780 PF07883 Cupin domain LDN97_RS00780 PF01381 Helix-turn-helix LDN97_RS00785 PF00202 Aminotransferase class-III LDN97_RS00790 PF00171 Aldehyde dehydrogenase family LDN97_RS00795 PF00117 Glutamine amidotransferase class-I LDN97_RS00795 PF00958 GMP synthase C terminal domain LDN97_RS00795 PF02540 NAD synthase LDN97_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS00800 PF03466 LysR substrate binding domain LDN97_RS00805 PF00294 pfkB family carbohydrate kinase LDN97_RS00810 PF02082 Transcriptional regulator LDN97_RS00825 PF02646 RmuC family LDN97_RS00830 PF02386 Cation transport protein LDN97_RS00835 PF02080 TrkA-C domain LDN97_RS00835 PF02254 TrkA-N domain LDN97_RS00840 PF01189 16S rRNA methyltransferase RsmB/F LDN97_RS00840 PF01029 NusB family LDN97_RS00845 PF00551 Formyl transferase LDN97_RS00845 PF02911 Formyl transferase, C-terminal domain LDN97_RS00850 PF01327 Polypeptide deformylase LDN97_RS00860 PF02481 DNA recombination-mediator protein A LDN97_RS00860 PF17782 DprA winged helix domain LDN97_RS00865 PF04361 Protein of unknown function (DUF494) LDN97_RS00870 PF01396 Topoisomerase DNA binding C4 zinc finger LDN97_RS00875 PF01300 Telomere recombination LDN97_RS00880 PF01218 Coproporphyrinogen III oxidase LDN97_RS00885 PF08501 Shikimate dehydrogenase substrate binding domain LDN97_RS00885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LDN97_RS00885 PF01488 Shikimate / quinate 5-dehydrogenase LDN97_RS00890 PF01926 50S ribosome-binding GTPase LDN97_RS00895 PF00034 Cytochrome c LDN97_RS00900 PF04220 Der GTPase activator (YihI) LDN97_RS00905 PF10675 Protein of unknown function (DUF2489) LDN97_RS00910 PF04055 Radical SAM superfamily LDN97_RS00910 PF06969 HemN C-terminal domain LDN97_RS00915 PF00962 Adenosine/AMP deaminase LDN97_RS00920 PF00072 Response regulator receiver domain LDN97_RS00920 PF00158 Sigma-54 interaction domain LDN97_RS00920 PF02954 Bacterial regulatory protein, Fis family LDN97_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS00925 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS00925 PF00989 PAS fold LDN97_RS00935 PF00120 Glutamine synthetase, catalytic domain LDN97_RS00935 PF03951 Glutamine synthetase, beta-Grasp domain LDN97_RS00940 PF00679 Elongation factor G C-terminus LDN97_RS00940 PF00009 Elongation factor Tu GTP binding domain LDN97_RS00940 PF03144 Elongation factor Tu domain 2 LDN97_RS00945 PF03631 Virulence factor BrkB LDN97_RS00950 PF02580 D-Tyr-tRNA(Tyr) deacylase LDN97_RS00960 PF00583 Acetyltransferase (GNAT) family LDN97_RS00960 PF09500 Putative thioesterase (yiiD_Cterm) LDN97_RS00970 PF00270 DEAD/DEAH box helicase LDN97_RS00970 PF00271 Helicase conserved C-terminal domain LDN97_RS00970 PF17191 RecG wedge domain LDN97_RS00975 PF13091 PLD-like domain LDN97_RS00980 PF02447 GntP family permease LDN97_RS00985 PF01202 Shikimate kinase LDN97_RS00990 PF00920 Dehydratase family LDN97_RS00995 PF01081 KDPG and KHG aldolase LDN97_RS01010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDN97_RS01010 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS01020 PF01551 Peptidase family M23 LDN97_RS01025 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDN97_RS01025 PF01676 Metalloenzyme superfamily LDN97_RS01030 PF00581 Rhodanese-like domain LDN97_RS01035 PF02556 Preprotein translocase subunit SecB LDN97_RS01040 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDN97_RS01040 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDN97_RS01045 PF01521 Iron-sulphur cluster biosynthesis LDN97_RS01045 PF01106 NifU-like domain LDN97_RS01050 PF00156 Phosphoribosyl transferase domain LDN97_RS01055 PF00561 alpha/beta hydrolase fold LDN97_RS01070 PF16921 Tex protein YqgF-like domain LDN97_RS01070 PF17674 HHH domain LDN97_RS01070 PF00575 S1 RNA binding domain LDN97_RS01070 PF09371 Tex-like protein N-terminal domain LDN97_RS01075 PF01272 Transcription elongation factor, GreA/GreB, C-term LDN97_RS01075 PF03449 Transcription elongation factor, N-terminal LDN97_RS01080 PF00072 Response regulator receiver domain LDN97_RS01080 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS01085 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS01085 PF00672 HAMP domain LDN97_RS01095 PF00338 Ribosomal protein S10p/S20e LDN97_RS01100 PF00297 Ribosomal protein L3 LDN97_RS01105 PF00573 Ribosomal protein L4/L1 family LDN97_RS01110 PF00276 Ribosomal protein L23 LDN97_RS01115 PF03947 Ribosomal Proteins L2, C-terminal domain LDN97_RS01115 PF00181 Ribosomal Proteins L2, RNA binding domain LDN97_RS01120 PF00203 Ribosomal protein S19 LDN97_RS01125 PF00237 Ribosomal protein L22p/L17e LDN97_RS01130 PF07650 KH domain LDN97_RS01130 PF00189 Ribosomal protein S3, C-terminal domain LDN97_RS01135 PF00252 Ribosomal protein L16p/L10e LDN97_RS01140 PF00831 Ribosomal L29 protein LDN97_RS01145 PF00366 Ribosomal protein S17 LDN97_RS01150 PF00238 Ribosomal protein L14p/L23e LDN97_RS01155 PF00467 KOW motif LDN97_RS01155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDN97_RS01160 PF00281 Ribosomal protein L5 LDN97_RS01160 PF00673 ribosomal L5P family C-terminus LDN97_RS01165 PF00253 Ribosomal protein S14p/S29e LDN97_RS01170 PF00410 Ribosomal protein S8 LDN97_RS01175 PF00347 Ribosomal protein L6 LDN97_RS01180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDN97_RS01185 PF03719 Ribosomal protein S5, C-terminal domain LDN97_RS01185 PF00333 Ribosomal protein S5, N-terminal domain LDN97_RS01190 PF00327 Ribosomal protein L30p/L7e LDN97_RS01195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDN97_RS01200 PF00344 SecY translocase LDN97_RS01205 PF00444 Ribosomal protein L36 LDN97_RS01210 PF00416 Ribosomal protein S13/S18 LDN97_RS01215 PF00411 Ribosomal protein S11 LDN97_RS01220 PF00163 Ribosomal protein S4/S9 N-terminal domain LDN97_RS01220 PF01479 S4 domain LDN97_RS01225 PF01000 RNA polymerase Rpb3/RpoA insert domain LDN97_RS01225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDN97_RS01225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDN97_RS01230 PF01196 Ribosomal protein L17 LDN97_RS01275 PF13936 Helix-turn-helix domain LDN97_RS01275 PF00665 Integrase core domain LDN97_RS01295 PF00999 Sodium/hydrogen exchanger family LDN97_RS01295 PF02254 TrkA-N domain LDN97_RS01300 PF02525 Flavodoxin-like fold LDN97_RS01305 PF03466 LysR substrate binding domain LDN97_RS01305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS01310 PF00106 short chain dehydrogenase LDN97_RS01325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LDN97_RS01325 PF00326 Prolyl oligopeptidase family LDN97_RS01330 PF16868 NMT1-like family LDN97_RS01345 PF07947 YhhN family LDN97_RS01350 PF07690 Major Facilitator Superfamily LDN97_RS01355 PF13533 Biotin-lipoyl like LDN97_RS01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS01360 PF03466 LysR substrate binding domain LDN97_RS01370 PF00375 Sodium:dicarboxylate symporter family LDN97_RS01375 PF10678 Protein of unknown function (DUF2492) LDN97_RS01380 PF01914 MarC family integral membrane protein LDN97_RS01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS01385 PF03466 LysR substrate binding domain LDN97_RS01390 PF02416 mttA/Hcf106 family LDN97_RS01400 PF01464 Transglycosylase SLT domain LDN97_RS01400 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS01410 PF13091 PLD-like domain LDN97_RS01425 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS01430 PF07226 Protein of unknown function (DUF1422) LDN97_RS01445 PF02881 SRP54-type protein, helical bundle domain LDN97_RS01445 PF00448 SRP54-type protein, GTPase domain LDN97_RS01450 PF00005 ABC transporter LDN97_RS01455 PF18075 FtsX extracellular domain LDN97_RS01460 PF04542 Sigma-70 region 2 LDN97_RS01460 PF00140 Sigma-70 factor, region 1.2 LDN97_RS01460 PF04545 Sigma-70, region 4 LDN97_RS01465 PF00484 Carbonic anhydrase LDN97_RS01470 PF07702 UTRA domain LDN97_RS01470 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS01475 PF01979 Amidohydrolase family LDN97_RS01480 PF00491 Arginase family LDN97_RS01485 PF17391 Urocanase N-terminal domain LDN97_RS01485 PF17392 Urocanase C-terminal domain LDN97_RS01485 PF01175 Urocanase Rossmann-like domain LDN97_RS01490 PF00221 Aromatic amino acid lyase LDN97_RS01495 PF01699 Sodium/calcium exchanger protein LDN97_RS01500 PF00563 EAL domain LDN97_RS01500 PF12792 CSS motif domain associated with EAL LDN97_RS01535 PF00263 Bacterial type II and III secretion system protein LDN97_RS01535 PF03958 Bacterial type II/III secretion system short domain LDN97_RS01550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDN97_RS01550 PF00437 Type II/IV secretion system protein LDN97_RS01555 PF00482 Type II secretion system (T2SS), protein F LDN97_RS01575 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS01575 PF00114 Pilin (bacterial filament) LDN97_RS01605 PF04085 rod shape-determining protein MreC LDN97_RS01610 PF04093 rod shape-determining protein MreD LDN97_RS01615 PF02545 Maf-like protein LDN97_RS01620 PF00575 S1 RNA binding domain LDN97_RS01620 PF10150 Ribonuclease E/G family LDN97_RS01625 PF13116 Protein of unknown function LDN97_RS01625 PF13502 AsmA-like C-terminal region LDN97_RS01630 PF00795 Carbon-nitrogen hydrolase LDN97_RS01635 PF01523 Putative modulator of DNA gyrase LDN97_RS01645 PF01914 MarC family integral membrane protein LDN97_RS01650 PF07690 Major Facilitator Superfamily LDN97_RS01660 PF04228 Putative neutral zinc metallopeptidase LDN97_RS01685 PF00999 Sodium/hydrogen exchanger family LDN97_RS01690 PF02965 Vitamin B12 dependent methionine synthase, activation domain LDN97_RS01690 PF02310 B12 binding domain LDN97_RS01690 PF02607 B12 binding domain LDN97_RS01690 PF00809 Pterin binding enzyme LDN97_RS01690 PF02574 Homocysteine S-methyltransferase LDN97_RS01700 PF08443 RimK-like ATP-grasp domain LDN97_RS01700 PF18030 RimK PreATP-grasp domain LDN97_RS01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS01710 PF00072 Response regulator receiver domain LDN97_RS01710 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS01725 PF01964 Radical SAM ThiC family LDN97_RS01725 PF13667 ThiC-associated domain LDN97_RS01730 PF02581 Thiamine monophosphate synthase LDN97_RS01735 PF00899 ThiF family LDN97_RS01745 PF05690 Thiazole biosynthesis protein ThiG LDN97_RS01750 PF04055 Radical SAM superfamily LDN97_RS01750 PF06968 Biotin and Thiamin Synthesis associated domain LDN97_RS01780 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS01785 PF13036 Peptidoglycan-synthase activator LpoB LDN97_RS01790 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS01795 PF06055 Exopolysaccharide synthesis, ExoD LDN97_RS01805 PF08803 Putative mono-oxygenase ydhR LDN97_RS01810 PF01638 HxlR-like helix-turn-helix LDN97_RS01835 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS01835 PF00593 TonB dependent receptor LDN97_RS01845 PF08241 Methyltransferase domain LDN97_RS01855 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LDN97_RS01860 PF03692 Putative zinc- or iron-chelating domain LDN97_RS01865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDN97_RS01870 PF01722 BolA-like protein LDN97_RS01880 PF05494 MlaC protein LDN97_RS01885 PF02470 MlaD protein LDN97_RS01890 PF02405 Permease MlaE LDN97_RS01895 PF00005 ABC transporter LDN97_RS01900 PF00571 CBS domain LDN97_RS01900 PF01380 SIS domain LDN97_RS01915 PF03968 OstA-like protein LDN97_RS01920 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDN97_RS01920 PF00005 ABC transporter LDN97_RS01925 PF00309 Sigma-54 factor, Activator interacting domain (AID) LDN97_RS01925 PF04963 Sigma-54 factor, core binding domain LDN97_RS01925 PF04552 Sigma-54, DNA binding domain LDN97_RS01930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDN97_RS01935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDN97_RS01940 PF03668 P-loop ATPase protein family LDN97_RS01945 PF00381 PTS HPr component phosphorylation site LDN97_RS01950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDN97_RS01950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDN97_RS01950 PF02378 Phosphotransferase system, EIIC LDN97_RS01955 PF07071 KDGP aldolase LDN97_RS01960 PF03841 L-seryl-tRNA selenium transferase LDN97_RS01965 PF01979 Amidohydrolase family LDN97_RS01995 PF13180 PDZ domain LDN97_RS02000 PF13180 PDZ domain LDN97_RS02000 PF00595 PDZ domain LDN97_RS02010 PF03969 AFG1-like ATPase LDN97_RS02015 PF00572 Ribosomal protein L13 LDN97_RS02020 PF00380 Ribosomal protein S9/S16 LDN97_RS02025 PF00355 Rieske [2Fe-2S] domain LDN97_RS02025 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LDN97_RS02030 PF00033 Cytochrome b/b6/petB LDN97_RS02030 PF00032 Cytochrome b(C-terminal)/b6/petD LDN97_RS02035 PF02167 Cytochrome C1 family LDN97_RS02040 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS02040 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS02045 PF04386 Stringent starvation protein B LDN97_RS02050 PF04972 BON domain LDN97_RS02055 PF13580 SIS domain LDN97_RS02060 PF02021 Uncharacterised protein family UPF0102 LDN97_RS02065 PF04348 LppC putative lipoprotein LDN97_RS02070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDN97_RS02080 PF02381 MraZ protein, putative antitoxin-like LDN97_RS02085 PF01795 MraW methylase family LDN97_RS02090 PF04999 Cell division protein FtsL LDN97_RS02095 PF03717 Penicillin-binding Protein dimerisation domain LDN97_RS02095 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS02100 PF01225 Mur ligase family, catalytic domain LDN97_RS02100 PF08245 Mur ligase middle domain LDN97_RS02100 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS02105 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS02105 PF08245 Mur ligase middle domain LDN97_RS02105 PF01225 Mur ligase family, catalytic domain LDN97_RS02110 PF00953 Glycosyl transferase family 4 LDN97_RS02110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LDN97_RS02115 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS02115 PF08245 Mur ligase middle domain LDN97_RS02120 PF01098 Cell cycle protein LDN97_RS02125 PF04101 Glycosyltransferase family 28 C-terminal domain LDN97_RS02125 PF03033 Glycosyltransferase family 28 N-terminal domain LDN97_RS02130 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS02130 PF08245 Mur ligase middle domain LDN97_RS02130 PF01225 Mur ligase family, catalytic domain LDN97_RS02135 PF03799 Cell division protein FtsQ LDN97_RS02135 PF08478 POTRA domain, FtsQ-type LDN97_RS02140 PF02491 SHS2 domain inserted in FTSA LDN97_RS02145 PF12327 FtsZ family, C-terminal domain LDN97_RS02145 PF00091 Tubulin/FtsZ family, GTPase domain LDN97_RS02150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LDN97_RS02160 PF07517 SecA DEAD-like domain LDN97_RS02160 PF01043 SecA preprotein cross-linking domain LDN97_RS02160 PF07516 SecA Wing and Scaffold domain LDN97_RS02160 PF02810 SEC-C motif LDN97_RS02170 PF00293 NUDIX domain LDN97_RS02175 PF03884 DNA gyrase inhibitor YacG LDN97_RS02180 PF07072 Cell division protein LDN97_RS02185 PF01121 Dephospho-CoA kinase LDN97_RS02190 PF06750 Bacterial Peptidase A24 N-terminal domain LDN97_RS02190 PF01478 Type IV leader peptidase family LDN97_RS02195 PF00482 Type II secretion system (T2SS), protein F LDN97_RS02200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDN97_RS02200 PF00437 Type II/IV secretion system protein LDN97_RS02205 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS02210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDN97_RS02210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDN97_RS02220 PF01510 N-acetylmuramoyl-L-alanine amidase LDN97_RS02225 PF07729 FCD domain LDN97_RS02225 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS02230 PF17831 Pyruvate dehydrogenase E1 component middle domain LDN97_RS02230 PF00456 Transketolase, thiamine diphosphate binding domain LDN97_RS02235 PF02817 e3 binding domain LDN97_RS02235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDN97_RS02235 PF00364 Biotin-requiring enzyme LDN97_RS02240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS02240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDN97_RS02250 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS02250 PF00672 HAMP domain LDN97_RS02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS02255 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS02255 PF00672 HAMP domain LDN97_RS02255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS02260 PF01734 Patatin-like phospholipase LDN97_RS02265 PF06434 Aconitate hydratase 2 N-terminus LDN97_RS02265 PF00330 Aconitase family (aconitate hydratase) LDN97_RS02265 PF11791 Aconitate B N-terminal domain LDN97_RS02270 PF00563 EAL domain LDN97_RS02270 PF12792 CSS motif domain associated with EAL LDN97_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS02275 PF03466 LysR substrate binding domain LDN97_RS02280 PF01810 LysE type translocator LDN97_RS02285 PF04030 D-arabinono-1,4-lactone oxidase LDN97_RS02285 PF01565 FAD binding domain LDN97_RS02290 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDN97_RS02290 PF07683 Cobalamin synthesis protein cobW C-terminal domain LDN97_RS02295 PF07690 Major Facilitator Superfamily LDN97_RS02305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDN97_RS02310 PF02152 Dihydroneopterin aldolase LDN97_RS02315 PF02660 Glycerol-3-phosphate acyltransferase LDN97_RS02360 PF02028 BCCT, betaine/carnitine/choline family transporter LDN97_RS02365 PF00488 MutS domain V LDN97_RS02365 PF01624 MutS domain I LDN97_RS02365 PF05188 MutS domain II LDN97_RS02365 PF05192 MutS domain III LDN97_RS02365 PF05190 MutS family domain IV LDN97_RS02375 PF02464 Competence-damaged protein LDN97_RS02380 PF00154 recA bacterial DNA recombination protein LDN97_RS02385 PF02631 RecX family LDN97_RS02390 PF02272 DHHA1 domain LDN97_RS02390 PF01411 tRNA synthetases class II (A) LDN97_RS02390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDN97_RS02395 PF00696 Amino acid kinase family LDN97_RS02395 PF01842 ACT domain LDN97_RS02395 PF13840 ACT domain LDN97_RS02400 PF02599 Global regulator protein family LDN97_RS02435 PF00768 D-alanyl-D-alanine carboxypeptidase LDN97_RS02440 PF09335 SNARE associated Golgi protein LDN97_RS02445 PF00571 CBS domain LDN97_RS02445 PF03471 Transporter associated domain LDN97_RS02445 PF01595 Cyclin M transmembrane N-terminal domain LDN97_RS02450 PF08264 Anticodon-binding domain of tRNA LDN97_RS02450 PF00133 tRNA synthetases class I (I, L, M and V) LDN97_RS02450 PF10458 Valyl tRNA synthetase tRNA binding arm LDN97_RS02455 PF04364 DNA polymerase III chi subunit, HolC LDN97_RS02460 PF02789 Cytosol aminopeptidase family, N-terminal domain LDN97_RS02460 PF00883 Cytosol aminopeptidase family, catalytic domain LDN97_RS02465 PF03739 Lipopolysaccharide export system permease LptF/LptG LDN97_RS02470 PF03739 Lipopolysaccharide export system permease LptF/LptG LDN97_RS02495 PF09669 Phage regulatory protein Rha (Phage_pRha) LDN97_RS02495 PF10549 ORF11CD3 domain LDN97_RS02530 PF07484 Phage Tail Collar Domain LDN97_RS02725 PF01381 Helix-turn-helix LDN97_RS02750 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS02750 PF00589 Phage integrase family LDN97_RS02760 PF00909 Ammonium Transporter Family LDN97_RS02765 PF01938 TRAM domain LDN97_RS02765 PF05958 tRNA (Uracil-5-)-methyltransferase LDN97_RS02780 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS02785 PF01026 TatD related DNase LDN97_RS02790 PF01773 Na+ dependent nucleoside transporter N-terminus LDN97_RS02790 PF07670 Nucleoside recognition LDN97_RS02790 PF07662 Na+ dependent nucleoside transporter C-terminus LDN97_RS02800 PF01791 DeoC/LacD family aldolase LDN97_RS02805 PF00591 Glycosyl transferase family, a/b domain LDN97_RS02805 PF02885 Glycosyl transferase family, helical bundle domain LDN97_RS02805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LDN97_RS02810 PF01676 Metalloenzyme superfamily LDN97_RS02815 PF01048 Phosphorylase superfamily LDN97_RS02820 PF05433 Glycine zipper 2TM domain LDN97_RS02820 PF16998 17 kDa outer membrane surface antigen LDN97_RS02825 PF00563 EAL domain LDN97_RS02825 PF05231 MASE1 LDN97_RS02825 PF08447 PAS fold LDN97_RS02825 PF13426 PAS domain LDN97_RS02825 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS02825 PF08448 PAS fold LDN97_RS02835 PF18429 Domain of unknown function (DUF5609) LDN97_RS02850 PF18073 Rubredoxin metal binding domain LDN97_RS02855 PF07238 PilZ domain LDN97_RS02860 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LDN97_RS02865 PF00216 Bacterial DNA-binding protein LDN97_RS02880 PF01207 Dihydrouridine synthase (Dus) LDN97_RS02885 PF01475 Ferric uptake regulator family LDN97_RS02900 PF05525 Branched-chain amino acid transport protein LDN97_RS02905 PF05175 Methyltransferase small domain LDN97_RS02910 PF00271 Helicase conserved C-terminal domain LDN97_RS02910 PF00270 DEAD/DEAH box helicase LDN97_RS02915 PF03883 Peroxide stress protein YaaA LDN97_RS02920 PF00437 Type II/IV secretion system protein LDN97_RS02925 PF00437 Type II/IV secretion system protein LDN97_RS02930 PF01168 Alanine racemase, N-terminal domain LDN97_RS02935 PF03807 NADP oxidoreductase coenzyme F420-dependent LDN97_RS02935 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDN97_RS02940 PF02325 YGGT family LDN97_RS02945 PF02594 Uncharacterised ACR, YggU family COG1872 LDN97_RS02965 PF06062 Uncharacterised protein family (UPF0231) LDN97_RS02970 PF05651 Putative sugar diacid recognition LDN97_RS02970 PF17853 GGDEF-like domain LDN97_RS02970 PF13556 PucR C-terminal helix-turn-helix domain LDN97_RS02975 PF02447 GntP family permease LDN97_RS02980 PF02595 Glycerate kinase family LDN97_RS02990 PF00255 Glutathione peroxidase LDN97_RS02995 PF03466 LysR substrate binding domain LDN97_RS02995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS03000 PF07670 Nucleoside recognition LDN97_RS03000 PF07662 Na+ dependent nucleoside transporter C-terminus LDN97_RS03000 PF01773 Na+ dependent nucleoside transporter N-terminus LDN97_RS03005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDN97_RS03005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDN97_RS03010 PF00472 RF-1 domain LDN97_RS03015 PF00543 Nitrogen regulatory protein P-II LDN97_RS03030 PF00005 ABC transporter LDN97_RS03030 PF08402 TOBE domain LDN97_RS03035 PF04261 Dyp-type peroxidase family LDN97_RS03040 PF02863 Arginine repressor, C-terminal domain LDN97_RS03040 PF01316 Arginine repressor, DNA binding domain LDN97_RS03045 PF00005 ABC transporter LDN97_RS03050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS03055 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS03060 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS03065 PF00056 lactate/malate dehydrogenase, NAD binding domain LDN97_RS03065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDN97_RS03070 PF08238 Sel1 repeat LDN97_RS03075 PF00970 Oxidoreductase FAD-binding domain LDN97_RS03075 PF00042 Globin LDN97_RS03075 PF00175 Oxidoreductase NAD-binding domain LDN97_RS03080 PF02082 Transcriptional regulator LDN97_RS03085 PF00571 CBS domain LDN97_RS03085 PF03471 Transporter associated domain LDN97_RS03085 PF01595 Cyclin M transmembrane N-terminal domain LDN97_RS03090 PF01578 Cytochrome C assembly protein LDN97_RS03095 PF02881 SRP54-type protein, helical bundle domain LDN97_RS03095 PF00448 SRP54-type protein, GTPase domain LDN97_RS03095 PF02978 Signal peptide binding domain LDN97_RS03100 PF00886 Ribosomal protein S16 LDN97_RS03105 PF05239 PRC-barrel domain LDN97_RS03105 PF01782 RimM N-terminal domain LDN97_RS03110 PF01746 tRNA (Guanine-1)-methyltransferase LDN97_RS03115 PF01245 Ribosomal protein L19 LDN97_RS03125 PF02976 DNA mismatch repair enzyme MutH LDN97_RS03130 PF00293 NUDIX domain LDN97_RS03135 PF05524 PEP-utilising enzyme, N-terminal LDN97_RS03135 PF00391 PEP-utilising enzyme, mobile domain LDN97_RS03135 PF02896 PEP-utilising enzyme, TIM barrel domain LDN97_RS03135 PF01590 GAF domain LDN97_RS03140 PF01790 Prolipoprotein diacylglyceryl transferase LDN97_RS03145 PF00303 Thymidylate synthase LDN97_RS03150 PF06965 Na+/H+ antiporter 1 LDN97_RS03300 PF00717 Peptidase S24-like LDN97_RS03305 PF00817 impB/mucB/samB family LDN97_RS03305 PF11799 impB/mucB/samB family C-terminal domain LDN97_RS03305 PF13438 Domain of unknown function (DUF4113) LDN97_RS03305 PF11798 IMS family HHH motif LDN97_RS03335 PF00145 C-5 cytosine-specific DNA methylase LDN97_RS03380 PF06892 Phage regulatory protein CII (CP76) LDN97_RS03410 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS03410 PF00589 Phage integrase family LDN97_RS03415 PF03466 LysR substrate binding domain LDN97_RS03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS03420 PF01022 Bacterial regulatory protein, arsR family LDN97_RS03425 PF01649 Ribosomal protein S20 LDN97_RS03430 PF03023 Lipid II flippase MurJ LDN97_RS03435 PF06574 FAD synthetase LDN97_RS03435 PF01687 Riboflavin kinase LDN97_RS03440 PF06827 Zinc finger found in FPG and IleRS LDN97_RS03440 PF00133 tRNA synthetases class I (I, L, M and V) LDN97_RS03440 PF08264 Anticodon-binding domain of tRNA LDN97_RS03445 PF01252 Signal peptidase (SPase) II LDN97_RS03450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS03455 PF02401 LytB protein LDN97_RS03460 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LDN97_RS03460 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS03495 PF00795 Carbon-nitrogen hydrolase LDN97_RS03495 PF02540 NAD synthase LDN97_RS03500 PF00543 Nitrogen regulatory protein P-II LDN97_RS03510 PF02664 S-Ribosylhomocysteinase (LuxS) LDN97_RS03515 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS03520 PF00773 RNB domain LDN97_RS03520 PF00575 S1 RNA binding domain LDN97_RS03520 PF08206 Ribonuclease B OB domain LDN97_RS03520 PF17876 Cold shock domain LDN97_RS03520 PF08461 Ribonuclease R winged-helix domain LDN97_RS03525 PF00588 SpoU rRNA Methylase family LDN97_RS03525 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDN97_RS03535 PF13673 Acetyltransferase (GNAT) domain LDN97_RS03540 PF02272 DHHA1 domain LDN97_RS03540 PF01411 tRNA synthetases class II (A) LDN97_RS03540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDN97_RS03545 PF01566 Natural resistance-associated macrophage protein LDN97_RS03550 PF01250 Ribosomal protein S6 LDN97_RS03555 PF01084 Ribosomal protein S18 LDN97_RS03560 PF01281 Ribosomal protein L9, N-terminal domain LDN97_RS03560 PF03948 Ribosomal protein L9, C-terminal domain LDN97_RS03565 PF00175 Oxidoreductase NAD-binding domain LDN97_RS03565 PF00970 Oxidoreductase FAD-binding domain LDN97_RS03585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS03595 PF14765 Polyketide synthase dehydratase LDN97_RS03595 PF08659 KR domain LDN97_RS03595 PF02801 Beta-ketoacyl synthase, C-terminal domain LDN97_RS03595 PF00550 Phosphopantetheine attachment site LDN97_RS03595 PF16197 Ketoacyl-synthetase C-terminal extension LDN97_RS03595 PF00698 Acyl transferase domain LDN97_RS03595 PF08990 Erythronolide synthase docking LDN97_RS03595 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS03595 PF00109 Beta-ketoacyl synthase, N-terminal domain LDN97_RS03600 PF09335 SNARE associated Golgi protein LDN97_RS03605 PF00675 Insulinase (Peptidase family M16) LDN97_RS03605 PF05193 Peptidase M16 inactive domain LDN97_RS03610 PF04262 Glutamate-cysteine ligase LDN97_RS03615 PF03605 Anaerobic c4-dicarboxylate membrane transporter LDN97_RS03620 PF10415 Fumarase C C-terminus LDN97_RS03620 PF00206 Lyase LDN97_RS03625 PF04186 FxsA cytoplasmic membrane protein LDN97_RS03630 PF01554 MatE LDN97_RS03635 PF00166 Chaperonin 10 Kd subunit LDN97_RS03640 PF00118 TCP-1/cpn60 chaperonin family LDN97_RS03650 PF00563 EAL domain LDN97_RS03650 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS03650 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS03665 PF00849 RNA pseudouridylate synthase LDN97_RS03670 PF00271 Helicase conserved C-terminal domain LDN97_RS03670 PF12137 RNA polymerase recycling family C-terminal LDN97_RS03670 PF00176 SNF2 family N-terminal domain LDN97_RS03670 PF18339 RapA N-terminal Tudor like domain 1 LDN97_RS03670 PF18337 RapA N-terminal Tudor like domain LDN97_RS03715 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS03720 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS03725 PF12857 TOBE-like domain LDN97_RS03725 PF00005 ABC transporter LDN97_RS03730 PF03466 LysR substrate binding domain LDN97_RS03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS03735 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LDN97_RS03735 PF18416 N-acetylglucosamine binding protein domain 2 LDN97_RS03740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS03740 PF08269 Cache domain LDN97_RS03765 PF11230 Protein of unknown function (DUF3029) LDN97_RS03770 PF04055 Radical SAM superfamily LDN97_RS03780 PF03466 LysR substrate binding domain LDN97_RS03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS03785 PF00155 Aminotransferase class I and II LDN97_RS03790 PF11658 Cellulose biosynthesis protein BcsG LDN97_RS03800 PF06564 Cellulose biosynthesis protein BcsQ LDN97_RS03805 PF03552 Cellulose synthase LDN97_RS03805 PF00535 Glycosyl transferase family 2 LDN97_RS03805 PF07238 PilZ domain LDN97_RS03815 PF03552 Cellulose synthase LDN97_RS03815 PF07238 PilZ domain LDN97_RS03815 PF00535 Glycosyl transferase family 2 LDN97_RS03820 PF03170 Bacterial cellulose synthase subunit LDN97_RS03825 PF01270 Glycosyl hydrolases family 8 LDN97_RS03830 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LDN97_RS03835 PF02583 Metal-sensitive transcriptional repressor LDN97_RS03850 PF18494 Pullulanase Ins domain LDN97_RS03850 PF17967 Pullulanase N2 domain LDN97_RS03850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDN97_RS03850 PF03714 Bacterial pullanase-associated domain LDN97_RS03850 PF11852 Domain of unknown function (DUF3372) LDN97_RS03860 PF03743 Bacterial conjugation TrbI-like protein LDN97_RS03865 PF03524 Conjugal transfer protein LDN97_RS03875 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LDN97_RS03890 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LDN97_RS03900 PF04956 TrbC/VIRB2 family LDN97_RS03905 PF00437 Type II/IV secretion system protein LDN97_RS03915 PF02534 Type IV secretory system Conjugative DNA transfer LDN97_RS03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS03925 PF03466 LysR substrate binding domain LDN97_RS03935 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS03940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS03945 PF00873 AcrB/AcrD/AcrF family LDN97_RS03950 PF00893 Small Multidrug Resistance protein LDN97_RS03970 PF10502 Signal peptidase, peptidase S26 LDN97_RS03985 PF13614 AAA domain LDN97_RS04015 PF05284 Protein of unknown function (DUF736) LDN97_RS04025 PF02195 ParB-like nuclease domain LDN97_RS04030 PF06067 Domain of unknown function (DUF932) LDN97_RS04045 PF04002 RadC-like JAB domain LDN97_RS04090 PF01381 Helix-turn-helix LDN97_RS04090 PF00145 C-5 cytosine-specific DNA methylase LDN97_RS04105 PF00403 Heavy-metal-associated domain LDN97_RS04110 PF08534 Redoxin LDN97_RS04115 PF00271 Helicase conserved C-terminal domain LDN97_RS04115 PF00270 DEAD/DEAH box helicase LDN97_RS04120 PF00672 HAMP domain LDN97_RS04120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS04120 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS04130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS04140 PF10952 Protein of unknown function (DUF2753) LDN97_RS04145 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS04160 PF00106 short chain dehydrogenase LDN97_RS04165 PF00929 Exonuclease LDN97_RS04170 PF04073 Aminoacyl-tRNA editing domain LDN97_RS04170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDN97_RS04170 PF03129 Anticodon binding domain LDN97_RS04175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS04175 PF00672 HAMP domain LDN97_RS04180 PF01330 RuvA N terminal domain LDN97_RS04180 PF07499 RuvA, C-terminal domain LDN97_RS04185 PF17864 RuvB AAA lid domain LDN97_RS04185 PF05491 RuvB C-terminal winged helix domain LDN97_RS04185 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDN97_RS04195 PF01654 Cytochrome bd terminal oxidase subunit I LDN97_RS04200 PF02322 Cytochrome bd terminal oxidase subunit II LDN97_RS04205 PF08173 Membrane bound YbgT-like protein LDN97_RS04210 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LDN97_RS04215 PF03061 Thioesterase superfamily LDN97_RS04220 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS04225 PF02472 Biopolymer transport protein ExbD/TolR LDN97_RS04235 PF07676 WD40-like Beta Propeller Repeat LDN97_RS04235 PF04052 TolB amino-terminal domain LDN97_RS04240 PF00691 OmpA family LDN97_RS04245 PF13174 Tetratricopeptide repeat LDN97_RS04245 PF16331 TolA binding protein trimerisation LDN97_RS04320 PF00672 HAMP domain LDN97_RS04320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS04325 PF02445 Quinolinate synthetase A protein LDN97_RS04330 PF01263 Aldose 1-epimerase LDN97_RS04335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDN97_RS04335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDN97_RS04340 PF02446 4-alpha-glucanotransferase LDN97_RS04345 PF00128 Alpha amylase, catalytic domain LDN97_RS04345 PF02806 Alpha amylase, C-terminal all-beta domain LDN97_RS04345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDN97_RS04350 PF00128 Alpha amylase, catalytic domain LDN97_RS04350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDN97_RS04355 PF01641 SelR domain LDN97_RS04370 PF00293 NUDIX domain LDN97_RS04375 PF00107 Zinc-binding dehydrogenase LDN97_RS04375 PF16884 N-terminal domain of oxidoreductase LDN97_RS04380 PF01047 MarR family LDN97_RS04395 PF01037 Lrp/AsnC ligand binding domain LDN97_RS04405 PF07690 Major Facilitator Superfamily LDN97_RS04425 PF00209 Sodium:neurotransmitter symporter family LDN97_RS04430 PF00209 Sodium:neurotransmitter symporter family LDN97_RS04445 PF00155 Aminotransferase class I and II LDN97_RS04445 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS04460 PF01177 Asp/Glu/Hydantoin racemase LDN97_RS04470 PF00501 AMP-binding enzyme LDN97_RS04480 PF00583 Acetyltransferase (GNAT) family LDN97_RS04490 PF17868 AAA lid domain LDN97_RS04490 PF12592 Protein of unknown function (DUF3763) LDN97_RS04490 PF07728 AAA domain (dynein-related subfamily) LDN97_RS04495 PF05762 VWA domain containing CoxE-like protein LDN97_RS04500 PF00563 EAL domain LDN97_RS04500 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS04500 PF08448 PAS fold LDN97_RS04505 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS04505 PF00072 Response regulator receiver domain LDN97_RS04510 PF16658 Class II release factor RF3, C-terminal domain LDN97_RS04510 PF03144 Elongation factor Tu domain 2 LDN97_RS04510 PF00009 Elongation factor Tu GTP binding domain LDN97_RS04520 PF01758 Sodium Bile acid symporter family LDN97_RS04525 PF00583 Acetyltransferase (GNAT) family LDN97_RS04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS04540 PF03466 LysR substrate binding domain LDN97_RS04545 PF04371 Porphyromonas-type peptidyl-arginine deiminase LDN97_RS04550 PF01425 Amidase LDN97_RS04565 PF00753 Metallo-beta-lactamase superfamily LDN97_RS04585 PF12833 Helix-turn-helix domain LDN97_RS04595 PF00175 Oxidoreductase NAD-binding domain LDN97_RS04595 PF00970 Oxidoreductase FAD-binding domain LDN97_RS04595 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS04600 PF00271 Helicase conserved C-terminal domain LDN97_RS04600 PF00270 DEAD/DEAH box helicase LDN97_RS04605 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS04610 PF05643 Putative bacterial lipoprotein (DUF799) LDN97_RS04620 PF03783 Curli production assembly/transport component CsgG LDN97_RS04640 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LDN97_RS04650 PF02687 FtsX-like permease family LDN97_RS04650 PF12704 MacB-like periplasmic core domain LDN97_RS04650 PF00005 ABC transporter LDN97_RS04655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS04660 PF00072 Response regulator receiver domain LDN97_RS04660 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS04665 PF00672 HAMP domain LDN97_RS04665 PF16527 Two-component sensor protein CpxA, periplasmic domain LDN97_RS04665 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS04685 PF00445 Ribonuclease T2 family LDN97_RS04690 PF03060 Nitronate monooxygenase LDN97_RS04720 PF08343 Ribonucleotide reductase N-terminal LDN97_RS04720 PF00317 Ribonucleotide reductase, all-alpha domain LDN97_RS04720 PF02867 Ribonucleotide reductase, barrel domain LDN97_RS04730 PF02562 PhoH-like protein LDN97_RS04730 PF13638 PIN domain LDN97_RS04735 PF00005 ABC transporter LDN97_RS04740 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS04760 PF00694 Aconitase C-terminal domain LDN97_RS04765 PF00330 Aconitase family (aconitate hydratase) LDN97_RS04770 PF00180 Isocitrate/isopropylmalate dehydrogenase LDN97_RS04775 PF00682 HMGL-like LDN97_RS04775 PF08502 LeuA allosteric (dimerisation) domain LDN97_RS04785 PF01569 PAP2 superfamily LDN97_RS04800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDN97_RS04800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDN97_RS04800 PF00205 Thiamine pyrophosphate enzyme, central domain LDN97_RS04805 PF10369 Small subunit of acetolactate synthase LDN97_RS04810 PF01515 Phosphate acetyl/butaryl transferase LDN97_RS04810 PF07085 DRTGG domain LDN97_RS04815 PF00871 Acetokinase family LDN97_RS04820 PF04217 Protein of unknown function, DUF412 LDN97_RS04825 PF03887 YfbU domain LDN97_RS04830 PF00578 AhpC/TSA family LDN97_RS04835 PF01842 ACT domain LDN97_RS04840 PF00701 Dihydrodipicolinate synthetase family LDN97_RS04845 PF06804 NlpB/DapX lipoprotein LDN97_RS04850 PF01259 SAICAR synthetase LDN97_RS04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS04860 PF03466 LysR substrate binding domain LDN97_RS04865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LDN97_RS04885 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS04885 PF18415 Histidine kinase receptor ArcB trans-membrane domain LDN97_RS04885 PF01627 Hpt domain LDN97_RS04885 PF00989 PAS fold LDN97_RS04885 PF00072 Response regulator receiver domain LDN97_RS04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS04890 PF01966 HD domain LDN97_RS04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS04900 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS04900 PF09456 RcsC Alpha-Beta-Loop (ABL) LDN97_RS04900 PF00072 Response regulator receiver domain LDN97_RS04905 PF00563 EAL domain LDN97_RS04905 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS04905 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS04910 PF08447 PAS fold LDN97_RS04910 PF13426 PAS domain LDN97_RS04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS04915 PF02357 Transcription termination factor nusG LDN97_RS04920 PF03180 NLPA lipoprotein LDN97_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS04930 PF00005 ABC transporter LDN97_RS04930 PF09383 NIL domain LDN97_RS04940 PF00480 ROK family LDN97_RS04945 PF08331 Domain of unknown function (DUF1730) LDN97_RS04950 PF01256 Carbohydrate kinase LDN97_RS04950 PF03853 YjeF-related protein N-terminus LDN97_RS04955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDN97_RS04960 PF01520 N-acetylmuramoyl-L-alanine amidase LDN97_RS04965 PF01119 DNA mismatch repair protein, C-terminal domain LDN97_RS04965 PF08676 MutL C terminal dimerisation domain LDN97_RS04975 PF17209 Hfq protein LDN97_RS04980 PF16360 GTP-binding GTPase Middle Region LDN97_RS04980 PF13167 GTP-binding GTPase N-terminal LDN97_RS04980 PF01926 50S ribosome-binding GTPase LDN97_RS04985 PF01145 SPFH domain / Band 7 family LDN97_RS04985 PF12221 Bacterial membrane protein N terminal LDN97_RS04990 PF01145 SPFH domain / Band 7 family LDN97_RS05000 PF00348 Polyprenyl synthetase LDN97_RS05005 PF00829 Ribosomal prokaryotic L21 protein LDN97_RS05010 PF01016 Ribosomal L27 protein LDN97_RS05015 PF01018 GTP1/OBG LDN97_RS05015 PF01926 50S ribosome-binding GTPase LDN97_RS05020 PF07670 Nucleoside recognition LDN97_RS05030 PF00296 Luciferase-like monooxygenase LDN97_RS05040 PF00149 Calcineurin-like phosphoesterase LDN97_RS05045 PF04379 ApaG domain LDN97_RS05050 PF00398 Ribosomal RNA adenine dimethylase LDN97_RS05055 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LDN97_RS05060 PF00639 PPIC-type PPIASE domain LDN97_RS05060 PF09312 SurA N-terminal domain LDN97_RS05065 PF04453 LPS transport system D LDN97_RS05065 PF03968 OstA-like protein LDN97_RS05070 PF01636 Phosphotransferase enzyme family LDN97_RS05075 PF00483 Nucleotidyl transferase LDN97_RS05080 PF05099 Tellurite resistance protein TerB LDN97_RS05080 PF00226 DnaJ domain LDN97_RS05085 PF00860 Permease family LDN97_RS05095 PF00005 ABC transporter LDN97_RS05095 PF12848 ABC transporter LDN97_RS05100 PF01464 Transglycosylase SLT domain LDN97_RS05105 PF00535 Glycosyl transferase family 2 LDN97_RS05115 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LDN97_RS05120 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS05125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDN97_RS05125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDN97_RS05125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDN97_RS05135 PF00005 ABC transporter LDN97_RS05140 PF01032 FecCD transport family LDN97_RS05150 PF06228 Haem utilisation ChuX/HutX LDN97_RS05155 PF01243 Pyridoxamine 5'-phosphate oxidase LDN97_RS05175 PF00593 TonB dependent receptor LDN97_RS05175 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS05180 PF12832 MFS_1 like family LDN97_RS05185 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS05185 PF00989 PAS fold LDN97_RS05190 PF08329 Chitinase A, N-terminal domain LDN97_RS05190 PF00704 Glycosyl hydrolases family 18 LDN97_RS05195 PF13847 Methyltransferase domain LDN97_RS05200 PF00027 Cyclic nucleotide-binding domain LDN97_RS05200 PF13545 Crp-like helix-turn-helix domain LDN97_RS05205 PF02566 OsmC-like protein LDN97_RS05220 PF00485 Phosphoribulokinase / Uridine kinase family LDN97_RS05225 PF06794 Uncharacterised protein family (UPF0270) LDN97_RS05230 PF01590 GAF domain LDN97_RS05230 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS05230 PF00360 Phytochrome region LDN97_RS05230 PF00563 EAL domain LDN97_RS05235 PF00561 alpha/beta hydrolase fold LDN97_RS05240 PF01584 CheW-like domain LDN97_RS05240 PF00072 Response regulator receiver domain LDN97_RS05250 PF09526 Probable metal-binding protein (DUF2387) LDN97_RS05255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS05260 PF04102 SlyX LDN97_RS05270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDN97_RS05270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS05275 PF02954 Bacterial regulatory protein, Fis family LDN97_RS05275 PF00158 Sigma-54 interaction domain LDN97_RS05275 PF00072 Response regulator receiver domain LDN97_RS05295 PF02872 5'-nucleotidase, C-terminal domain LDN97_RS05295 PF00149 Calcineurin-like phosphoesterase LDN97_RS05305 PF00772 DnaB-like helicase N terminal domain LDN97_RS05305 PF03796 DnaB-like helicase C terminal domain LDN97_RS05310 PF00842 Alanine racemase, C-terminal domain LDN97_RS05310 PF01168 Alanine racemase, N-terminal domain LDN97_RS05315 PF00171 Aldehyde dehydrogenase family LDN97_RS05315 PF01619 Proline dehydrogenase LDN97_RS05315 PF14850 DNA-binding domain of Proline dehydrogenase LDN97_RS05315 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LDN97_RS05325 PF10415 Fumarase C C-terminus LDN97_RS05325 PF00206 Lyase LDN97_RS05335 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS05335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS05340 PF07690 Major Facilitator Superfamily LDN97_RS05345 PF03575 Peptidase family S51 LDN97_RS05350 PF00072 Response regulator receiver domain LDN97_RS05350 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS05355 PF00989 PAS fold LDN97_RS05355 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS05360 PF13247 4Fe-4S dicluster domain LDN97_RS05365 PF03916 Polysulphide reductase, NrfD LDN97_RS05370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDN97_RS05370 PF00384 Molybdopterin oxidoreductase LDN97_RS05370 PF01568 Molydopterin dinucleotide binding domain LDN97_RS05405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDN97_RS05405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDN97_RS05410 PF03466 LysR substrate binding domain LDN97_RS05410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS05415 PF01810 LysE type translocator LDN97_RS05420 PF01136 Peptidase family U32 LDN97_RS05420 PF12392 Collagenase LDN97_RS05430 PF06906 Protein of unknown function (DUF1272) LDN97_RS05440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDN97_RS05440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDN97_RS05445 PF02805 Metal binding domain of Ada LDN97_RS05445 PF06029 AlkA N-terminal domain LDN97_RS05445 PF00730 HhH-GPD superfamily base excision DNA repair protein LDN97_RS05445 PF12833 Helix-turn-helix domain LDN97_RS05450 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LDN97_RS05475 PF00106 short chain dehydrogenase LDN97_RS05480 PF03573 outer membrane porin, OprD family LDN97_RS05485 PF02743 Cache domain LDN97_RS05485 PF00672 HAMP domain LDN97_RS05485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS05495 PF02447 GntP family permease LDN97_RS05500 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS05505 PF01261 Xylose isomerase-like TIM barrel LDN97_RS05510 PF00596 Class II Aldolase and Adducin N-terminal domain LDN97_RS05515 PF07005 Sugar-binding N-terminal domain LDN97_RS05515 PF17042 Nucleotide-binding C-terminal domain LDN97_RS05520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDN97_RS05520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDN97_RS05525 PF00455 DeoR C terminal sensor domain LDN97_RS05525 PF08220 DeoR-like helix-turn-helix domain LDN97_RS05535 PF07995 Glucose / Sorbosone dehydrogenase LDN97_RS05540 PF03976 Polyphosphate kinase 2 (PPK2) LDN97_RS05565 PF00800 Prephenate dehydratase LDN97_RS05565 PF01817 Chorismate mutase type II LDN97_RS05590 PF08349 Protein of unknown function (DUF1722) LDN97_RS05595 PF13411 MerR HTH family regulatory protein LDN97_RS05600 PF03441 FAD binding domain of DNA photolyase LDN97_RS05600 PF00875 DNA photolyase LDN97_RS05610 PF00106 short chain dehydrogenase LDN97_RS05650 PF00210 Ferritin-like domain LDN97_RS05655 PF03063 Prismane/CO dehydrogenase family LDN97_RS05660 PF00175 Oxidoreductase NAD-binding domain LDN97_RS05660 PF00970 Oxidoreductase FAD-binding domain LDN97_RS05660 PF00042 Globin LDN97_RS05665 PF16363 GDP-mannose 4,6 dehydratase LDN97_RS05680 PF01380 SIS domain LDN97_RS05680 PF01418 Helix-turn-helix domain, rpiR family LDN97_RS05700 PF13006 Insertion element 4 transposase N-terminal LDN97_RS05700 PF01609 Transposase DDE domain LDN97_RS05715 PF01609 Transposase DDE domain LDN97_RS05715 PF05598 Transposase domain (DUF772) LDN97_RS05745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS05745 PF08447 PAS fold LDN97_RS05745 PF13426 PAS domain LDN97_RS05755 PF01926 50S ribosome-binding GTPase LDN97_RS05755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDN97_RS05790 PF00589 Phage integrase family LDN97_RS05790 PF13356 Arm DNA-binding domain LDN97_RS05795 PF00722 Glycosyl hydrolases family 16 LDN97_RS05800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LDN97_RS05805 PF00232 Glycosyl hydrolase family 1 LDN97_RS05810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDN97_RS05810 PF02378 Phosphotransferase system, EIIC LDN97_RS05815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDN97_RS05825 PF00404 Dockerin type I domain LDN97_RS05825 PF00759 Glycosyl hydrolase family 9 LDN97_RS05825 PF02927 Cellulase N-terminal ig-like domain LDN97_RS05825 PF02018 Carbohydrate binding domain LDN97_RS05830 PF01915 Glycosyl hydrolase family 3 C-terminal domain LDN97_RS05830 PF00933 Glycosyl hydrolase family 3 N terminal domain LDN97_RS05830 PF14310 Fibronectin type III-like domain LDN97_RS05835 PF00672 HAMP domain LDN97_RS05835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS05835 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS05840 PF13416 Bacterial extracellular solute-binding protein LDN97_RS05845 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS05865 PF00873 AcrB/AcrD/AcrF family LDN97_RS05870 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS05870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS05875 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS05875 PF00072 Response regulator receiver domain LDN97_RS05880 PF00672 HAMP domain LDN97_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS05880 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS05890 PF01965 DJ-1/PfpI family LDN97_RS05895 PF08546 Ketopantoate reductase PanE/ApbA C terminal LDN97_RS05895 PF02558 Ketopantoate reductase PanE/ApbA LDN97_RS05900 PF04461 Protein of unknown function (DUF520) LDN97_RS05905 PF03502 Nucleoside-specific channel-forming protein, Tsx LDN97_RS05910 PF07690 Major Facilitator Superfamily LDN97_RS05920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDN97_RS05930 PF05175 Methyltransferase small domain LDN97_RS05935 PF01722 BolA-like protein LDN97_RS05940 PF11973 NQRA C-terminal domain LDN97_RS05940 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LDN97_RS05945 PF03116 NQR2, RnfD, RnfE family LDN97_RS05950 PF04205 FMN-binding domain LDN97_RS05955 PF02508 Rnf-Nqr subunit, membrane protein LDN97_RS05960 PF02508 Rnf-Nqr subunit, membrane protein LDN97_RS05965 PF00175 Oxidoreductase NAD-binding domain LDN97_RS05965 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS05965 PF00970 Oxidoreductase FAD-binding domain LDN97_RS05970 PF02424 ApbE family LDN97_RS05985 PF11798 IMS family HHH motif LDN97_RS05985 PF11799 impB/mucB/samB family C-terminal domain LDN97_RS05985 PF00817 impB/mucB/samB family LDN97_RS05990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS05990 PF00672 HAMP domain LDN97_RS05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS05995 PF03466 LysR substrate binding domain LDN97_RS06010 PF01728 FtsJ-like methyltransferase LDN97_RS06010 PF18125 RlmM ferredoxin-like domain LDN97_RS06020 PF00180 Isocitrate/isopropylmalate dehydrogenase LDN97_RS06020 PF18324 Hypothetical protein TT1725 LDN97_RS06025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDN97_RS06025 PF01367 5'-3' exonuclease, C-terminal SAM fold LDN97_RS06030 PF03641 Possible lysine decarboxylase LDN97_RS06030 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LDN97_RS06030 PF11892 Domain of unknown function (DUF3412) LDN97_RS06035 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS06045 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LDN97_RS06045 PF14489 QueF-like protein LDN97_RS06050 PF07348 Syd protein (SUKH-2) LDN97_RS06085 PF01695 IstB-like ATP binding protein LDN97_RS06090 PF00665 Integrase core domain LDN97_RS06105 PF00075 RNase H LDN97_RS06150 PF02796 Helix-turn-helix domain of resolvase LDN97_RS06150 PF00239 Resolvase, N terminal domain LDN97_RS06170 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LDN97_RS06195 PF04287 tRNA pseudouridine synthase C LDN97_RS06200 PF00849 RNA pseudouridylate synthase LDN97_RS06205 PF00258 Flavodoxin LDN97_RS06215 PF02264 LamB porin LDN97_RS06220 PF07148 Maltose operon periplasmic protein precursor (MalM) LDN97_RS06225 PF02378 Phosphotransferase system, EIIC LDN97_RS06225 PF00367 phosphotransferase system, EIIB LDN97_RS06230 PF11944 Protein of unknown function (DUF3461) LDN97_RS06235 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS06235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LDN97_RS06235 PF14602 Hexapeptide repeat of succinyl-transferase LDN97_RS06240 PF01842 ACT domain LDN97_RS06240 PF08335 GlnD PII-uridylyltransferase LDN97_RS06240 PF01966 HD domain LDN97_RS06240 PF01909 Nucleotidyltransferase domain LDN97_RS06245 PF00557 Metallopeptidase family M24 LDN97_RS06250 PF00318 Ribosomal protein S2 LDN97_RS06255 PF00889 Elongation factor TS LDN97_RS06260 PF00696 Amino acid kinase family LDN97_RS06265 PF01765 Ribosome recycling factor LDN97_RS06270 PF01255 Putative undecaprenyl diphosphate synthase LDN97_RS06280 PF13288 DXP reductoisomerase C-terminal domain LDN97_RS06280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LDN97_RS06280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LDN97_RS06285 PF02163 Peptidase family M50 LDN97_RS06285 PF17820 PDZ domain LDN97_RS06290 PF01103 Surface antigen LDN97_RS06290 PF07244 Surface antigen variable number repeat LDN97_RS06295 PF03938 Outer membrane protein (OmpH-like) LDN97_RS06300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LDN97_RS06300 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS06305 PF07977 FabA-like domain LDN97_RS06310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LDN97_RS06310 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS06315 PF02684 Lipid-A-disaccharide synthetase LDN97_RS06320 PF01351 Ribonuclease HII LDN97_RS06325 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDN97_RS06325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDN97_RS06325 PF14579 Helix-hairpin-helix motif LDN97_RS06325 PF02811 PHP domain LDN97_RS06325 PF01336 OB-fold nucleic acid binding domain LDN97_RS06330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDN97_RS06340 PF03466 LysR substrate binding domain LDN97_RS06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS06350 PF13520 Amino acid permease LDN97_RS06360 PF12848 ABC transporter LDN97_RS06360 PF16326 ABC transporter C-terminal domain LDN97_RS06360 PF00005 ABC transporter LDN97_RS06370 PF05649 Peptidase family M13 LDN97_RS06370 PF01431 Peptidase family M13 LDN97_RS06375 PF11734 TilS substrate C-terminal domain LDN97_RS06375 PF09179 TilS substrate binding domain LDN97_RS06375 PF01171 PP-loop family LDN97_RS06380 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS06385 PF02254 TrkA-N domain LDN97_RS06385 PF02080 TrkA-C domain LDN97_RS06385 PF00999 Sodium/hydrogen exchanger family LDN97_RS06405 PF00072 Response regulator receiver domain LDN97_RS06405 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS06415 PF00128 Alpha amylase, catalytic domain LDN97_RS06430 PF00535 Glycosyl transferase family 2 LDN97_RS06445 PF01471 Putative peptidoglycan binding domain LDN97_RS06445 PF03734 L,D-transpeptidase catalytic domain LDN97_RS06450 PF05951 Bacterial protein of unknown function (DUF882) LDN97_RS06460 PF03458 UPF0126 domain LDN97_RS06470 PF06470 SMC proteins Flexible Hinge Domain LDN97_RS06470 PF02463 RecF/RecN/SMC N terminal domain LDN97_RS06475 PF04354 ZipA, C-terminal FtsZ-binding domain LDN97_RS06480 PF01653 NAD-dependent DNA ligase adenylation domain LDN97_RS06480 PF12826 Helix-hairpin-helix motif LDN97_RS06480 PF03120 NAD-dependent DNA ligase OB-fold domain LDN97_RS06480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDN97_RS06480 PF00533 BRCA1 C Terminus (BRCT) domain LDN97_RS06490 PF03477 ATP cone domain LDN97_RS06490 PF13597 Anaerobic ribonucleoside-triphosphate reductase LDN97_RS06505 PF01679 Proteolipid membrane potential modulator LDN97_RS06525 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS06525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS06530 PF01047 MarR family LDN97_RS06535 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LDN97_RS06535 PF00989 PAS fold LDN97_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS06535 PF17203 Single cache domain 3 LDN97_RS06540 PF12431 Transcriptional regulator LDN97_RS06540 PF00072 Response regulator receiver domain LDN97_RS06550 PF00248 Aldo/keto reductase family LDN97_RS06555 PF00892 EamA-like transporter family LDN97_RS06565 PF00171 Aldehyde dehydrogenase family LDN97_RS06570 PF01590 GAF domain LDN97_RS06570 PF02954 Bacterial regulatory protein, Fis family LDN97_RS06570 PF00158 Sigma-54 interaction domain LDN97_RS06575 PF07694 5TMR of 5TMR-LYT LDN97_RS06575 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS06580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS06585 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS06585 PF00072 Response regulator receiver domain LDN97_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS06590 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS06590 PF11808 Phosphate regulon sensor protein PhoR LDN97_RS06590 PF00989 PAS fold LDN97_RS06595 PF12849 PBP superfamily domain LDN97_RS06600 PF01435 Peptidase family M48 LDN97_RS06610 PF00480 ROK family LDN97_RS06615 PF03932 CutC family LDN97_RS06620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS06620 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDN97_RS06625 PF00005 ABC transporter LDN97_RS06640 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS06645 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS06650 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS06655 PF00005 ABC transporter LDN97_RS06665 PF00293 NUDIX domain LDN97_RS06670 PF08534 Redoxin LDN97_RS06675 PF01699 Sodium/calcium exchanger protein LDN97_RS06680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDN97_RS06680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDN97_RS06685 PF01235 Sodium:alanine symporter family LDN97_RS06695 PF00860 Permease family LDN97_RS06700 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS06700 PF00072 Response regulator receiver domain LDN97_RS06705 PF10692 Protein of unknown function (DUF2498) LDN97_RS06710 PF01554 MatE LDN97_RS06715 PF12833 Helix-turn-helix domain LDN97_RS06720 PF03949 Malic enzyme, NAD binding domain LDN97_RS06720 PF00390 Malic enzyme, N-terminal domain LDN97_RS06725 PF00691 OmpA family LDN97_RS06725 PF01389 OmpA-like transmembrane domain LDN97_RS06730 PF00691 OmpA family LDN97_RS06730 PF01389 OmpA-like transmembrane domain LDN97_RS06735 PF00691 OmpA family LDN97_RS06735 PF01389 OmpA-like transmembrane domain LDN97_RS06750 PF00209 Sodium:neurotransmitter symporter family LDN97_RS06755 PF01734 Patatin-like phospholipase LDN97_RS06760 PF17158 Membrane-associated sensor, integral membrane domain LDN97_RS06760 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS06770 PF00873 AcrB/AcrD/AcrF family LDN97_RS06775 PF04055 Radical SAM superfamily LDN97_RS06775 PF08497 Radical SAM N-terminal LDN97_RS06775 PF11842 Domain of unknown function (DUF3362) LDN97_RS06805 PF02075 Crossover junction endodeoxyribonuclease RuvC LDN97_RS06810 PF00230 Major intrinsic protein LDN97_RS06820 PF01464 Transglycosylase SLT domain LDN97_RS06820 PF10145 Phage-related minor tail protein LDN97_RS06820 PF01551 Peptidase family M23 LDN97_RS06835 PF13396 Phospholipase_D-nuclease N-terminal LDN97_RS06835 PF13091 PLD-like domain LDN97_RS06845 PF00551 Formyl transferase LDN97_RS06845 PF01842 ACT domain LDN97_RS06850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDN97_RS06860 PF00085 Thioredoxin LDN97_RS06865 PF01648 4'-phosphopantetheinyl transferase superfamily LDN97_RS06870 PF00877 NlpC/P60 family LDN97_RS06875 PF05971 RNA methyltransferase LDN97_RS06880 PF01575 MaoC like domain LDN97_RS06890 PF03734 L,D-transpeptidase catalytic domain LDN97_RS06890 PF01476 LysM domain LDN97_RS06890 PF17969 L,D-transpeptidase C-terminal domain LDN97_RS06900 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS06900 PF00072 Response regulator receiver domain LDN97_RS06900 PF09308 LuxQ, periplasmic LDN97_RS06920 PF10725 Protein of unknown function (DUF2517) LDN97_RS06925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS06925 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS06925 PF01627 Hpt domain LDN97_RS06925 PF00989 PAS fold LDN97_RS06925 PF00072 Response regulator receiver domain LDN97_RS06930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDN97_RS06935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS06935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDN97_RS06940 PF02690 Na+/Pi-cotransporter LDN97_RS06950 PF13520 Amino acid permease LDN97_RS06955 PF00324 Amino acid permease LDN97_RS06965 PF00202 Aminotransferase class-III LDN97_RS06970 PF00171 Aldehyde dehydrogenase family LDN97_RS06975 PF07883 Cupin domain LDN97_RS06975 PF01381 Helix-turn-helix LDN97_RS06980 PF01266 FAD dependent oxidoreductase LDN97_RS07010 PF00072 Response regulator receiver domain LDN97_RS07010 PF02954 Bacterial regulatory protein, Fis family LDN97_RS07010 PF00158 Sigma-54 interaction domain LDN97_RS07015 PF02254 TrkA-N domain LDN97_RS07015 PF00999 Sodium/hydrogen exchanger family LDN97_RS07030 PF04381 Putative exonuclease, RdgC LDN97_RS07035 PF00583 Acetyltransferase (GNAT) family LDN97_RS07040 PF00149 Calcineurin-like phosphoesterase LDN97_RS07040 PF12320 Type 5 capsule protein repressor C-terminal domain LDN97_RS07050 PF01292 Prokaryotic cytochrome b561 LDN97_RS07055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDN97_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain LDN97_RS07060 PF05524 PEP-utilising enzyme, N-terminal LDN97_RS07060 PF00391 PEP-utilising enzyme, mobile domain LDN97_RS07065 PF00381 PTS HPr component phosphorylation site LDN97_RS07070 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS07075 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS07075 PF17862 AAA+ lid domain LDN97_RS07075 PF06480 FtsH Extracellular LDN97_RS07075 PF01434 Peptidase family M41 LDN97_RS07085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDN97_RS07085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDN97_RS07090 PF01980 tRNA-methyltransferase O LDN97_RS07090 PF18389 TrmO C-terminal domain LDN97_RS07110 PF00664 ABC transporter transmembrane region LDN97_RS07110 PF00005 ABC transporter LDN97_RS07115 PF00005 ABC transporter LDN97_RS07115 PF00664 ABC transporter transmembrane region LDN97_RS07130 PF00072 Response regulator receiver domain LDN97_RS07130 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS07140 PF03737 Aldolase/RraA LDN97_RS07155 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LDN97_RS07160 PF00588 SpoU rRNA Methylase family LDN97_RS07165 PF00696 Amino acid kinase family LDN97_RS07165 PF01842 ACT domain LDN97_RS07165 PF13840 ACT domain LDN97_RS07165 PF00742 Homoserine dehydrogenase LDN97_RS07165 PF03447 Homoserine dehydrogenase, NAD binding domain LDN97_RS07170 PF08544 GHMP kinases C terminal LDN97_RS07170 PF00288 GHMP kinases N terminal domain LDN97_RS07175 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS07175 PF14821 Threonine synthase N terminus LDN97_RS07205 PF02028 BCCT, betaine/carnitine/choline family transporter LDN97_RS07215 PF05114 Protein of unknown function (DUF692) LDN97_RS07260 PF04632 Fusaric acid resistance protein family LDN97_RS07265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LDN97_RS07270 PF12804 MobA-like NTP transferase domain LDN97_RS07275 PF03949 Malic enzyme, NAD binding domain LDN97_RS07275 PF00390 Malic enzyme, N-terminal domain LDN97_RS07285 PF00860 Permease family LDN97_RS07295 PF10282 Lactonase, 7-bladed beta-propeller LDN97_RS07300 PF01810 LysE type translocator LDN97_RS07305 PF12795 Mechanosensitive ion channel porin domain LDN97_RS07305 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDN97_RS07305 PF00924 Mechanosensitive ion channel LDN97_RS07310 PF00224 Pyruvate kinase, barrel domain LDN97_RS07310 PF02887 Pyruvate kinase, alpha/beta domain LDN97_RS07315 PF08007 Cupin superfamily protein LDN97_RS07320 PF08328 Adenylosuccinate lyase C-terminal LDN97_RS07320 PF00206 Lyase LDN97_RS07325 PF04356 Protein of unknown function (DUF489) LDN97_RS07335 PF00293 NUDIX domain LDN97_RS07340 PF00849 RNA pseudouridylate synthase LDN97_RS07345 PF00583 Acetyltransferase (GNAT) family LDN97_RS07350 PF09278 MerR, DNA binding LDN97_RS07350 PF00376 MerR family regulatory protein LDN97_RS07355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS07390 PF00180 Isocitrate/isopropylmalate dehydrogenase LDN97_RS07400 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS07405 PF03466 LysR substrate binding domain LDN97_RS07410 PF00816 H-NS histone family LDN97_RS07415 PF00793 DAHP synthetase I family LDN97_RS07420 PF04954 Siderophore-interacting protein LDN97_RS07420 PF08021 Siderophore-interacting FAD-binding domain LDN97_RS07425 PF02321 Outer membrane efflux protein LDN97_RS07430 PF12704 MacB-like periplasmic core domain LDN97_RS07430 PF00005 ABC transporter LDN97_RS07430 PF02687 FtsX-like permease family LDN97_RS07435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS07445 PF02463 RecF/RecN/SMC N terminal domain LDN97_RS07450 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS07450 PF17158 Membrane-associated sensor, integral membrane domain LDN97_RS07455 PF01513 ATP-NAD kinase LDN97_RS07460 PF01025 GrpE LDN97_RS07465 PF00012 Hsp70 protein LDN97_RS07470 PF00226 DnaJ domain LDN97_RS07470 PF01556 DnaJ C terminal domain LDN97_RS07470 PF00684 DnaJ central domain LDN97_RS07475 PF02264 LamB porin LDN97_RS07475 PF11471 Maltoporin periplasmic N-terminal extension LDN97_RS07480 PF00294 pfkB family carbohydrate kinase LDN97_RS07485 PF02378 Phosphotransferase system, EIIC LDN97_RS07485 PF00367 phosphotransferase system, EIIB LDN97_RS07490 PF08244 Glycosyl hydrolases family 32 C terminal LDN97_RS07490 PF00251 Glycosyl hydrolases family 32 N-terminal domain LDN97_RS07495 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS07495 PF13407 Periplasmic binding protein domain LDN97_RS07500 PF02308 MgtC family LDN97_RS07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS07520 PF01022 Bacterial regulatory protein, arsR family LDN97_RS07525 PF04143 Sulphur transport LDN97_RS07540 PF00873 AcrB/AcrD/AcrF family LDN97_RS07545 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS07545 PF00563 EAL domain LDN97_RS07545 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS07550 PF03099 Biotin/lipoate A/B protein ligase family LDN97_RS07550 PF10437 Bacterial lipoate protein ligase C-terminus LDN97_RS07565 PF00873 AcrB/AcrD/AcrF family LDN97_RS07570 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS07570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS07580 PF01609 Transposase DDE domain LDN97_RS07580 PF13006 Insertion element 4 transposase N-terminal LDN97_RS07585 PF03372 Endonuclease/Exonuclease/phosphatase family LDN97_RS07595 PF00072 Response regulator receiver domain LDN97_RS07600 PF00011 Hsp20/alpha crystallin family LDN97_RS07605 PF02424 ApbE family LDN97_RS07610 PF00127 Copper binding proteins, plastocyanin/azurin family LDN97_RS07625 PF01047 MarR family LDN97_RS07640 PF12323 Helix-turn-helix domain LDN97_RS07640 PF07282 Putative transposase DNA-binding domain LDN97_RS07640 PF01385 Probable transposase LDN97_RS07645 PF01156 Inosine-uridine preferring nucleoside hydrolase LDN97_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS07655 PF03466 LysR substrate binding domain LDN97_RS07660 PF02627 Carboxymuconolactone decarboxylase family LDN97_RS07665 PF06481 COX Aromatic Rich Motif LDN97_RS07665 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDN97_RS07670 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDN97_RS07675 PF00510 Cytochrome c oxidase subunit III LDN97_RS07680 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LDN97_RS07685 PF01040 UbiA prenyltransferase family LDN97_RS07690 PF07690 Major Facilitator Superfamily LDN97_RS07695 PF07237 Protein of unknown function (DUF1428) LDN97_RS07700 PF01609 Transposase DDE domain LDN97_RS07700 PF13006 Insertion element 4 transposase N-terminal LDN97_RS07705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LDN97_RS07710 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS07715 PF00005 ABC transporter LDN97_RS07720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDN97_RS07730 PF03466 LysR substrate binding domain LDN97_RS07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS07750 PF07804 HipA-like C-terminal domain LDN97_RS07750 PF13657 HipA N-terminal domain LDN97_RS07755 PF01381 Helix-turn-helix LDN97_RS07760 PF00669 Bacterial flagellin N-terminal helical region LDN97_RS07760 PF07196 Flagellin hook IN motif LDN97_RS07760 PF00700 Bacterial flagellin C-terminal helical region LDN97_RS07765 PF01609 Transposase DDE domain LDN97_RS07765 PF13808 DDE_Tnp_1-associated LDN97_RS07770 PF05598 Transposase domain (DUF772) LDN97_RS07770 PF01609 Transposase DDE domain LDN97_RS07775 PF00700 Bacterial flagellin C-terminal helical region LDN97_RS07775 PF07196 Flagellin hook IN motif LDN97_RS07775 PF00669 Bacterial flagellin N-terminal helical region LDN97_RS07780 PF00290 Tryptophan synthase alpha chain LDN97_RS07785 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS07790 PF00218 Indole-3-glycerol phosphate synthase LDN97_RS07790 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LDN97_RS07795 PF02885 Glycosyl transferase family, helical bundle domain LDN97_RS07795 PF00591 Glycosyl transferase family, a/b domain LDN97_RS07800 PF00591 Glycosyl transferase family, a/b domain LDN97_RS07800 PF02885 Glycosyl transferase family, helical bundle domain LDN97_RS07800 PF00117 Glutamine amidotransferase class-I LDN97_RS07805 PF00425 chorismate binding enzyme LDN97_RS07805 PF04715 Anthranilate synthase component I, N terminal region LDN97_RS07810 PF02811 PHP domain LDN97_RS07815 PF01300 Telomere recombination LDN97_RS07820 PF02616 Segregation and condensation protein ScpA LDN97_RS07825 PF04079 Segregation and condensation complex subunit ScpB LDN97_RS07830 PF01479 S4 domain LDN97_RS07830 PF00849 RNA pseudouridylate synthase LDN97_RS07850 PF08361 MAATS-type transcriptional repressor, C-terminal region LDN97_RS07850 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS07855 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS07860 PF00873 AcrB/AcrD/AcrF family LDN97_RS07865 PF02321 Outer membrane efflux protein LDN97_RS07885 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS07890 PF02770 Acyl-CoA dehydrogenase, middle domain LDN97_RS07890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDN97_RS07890 PF09317 Domain of unknown function (DUF1974) LDN97_RS07890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDN97_RS07895 PF00873 AcrB/AcrD/AcrF family LDN97_RS07905 PF00224 Pyruvate kinase, barrel domain LDN97_RS07905 PF02887 Pyruvate kinase, alpha/beta domain LDN97_RS07915 PF13808 DDE_Tnp_1-associated LDN97_RS07915 PF01609 Transposase DDE domain LDN97_RS07925 PF01609 Transposase DDE domain LDN97_RS07935 PF01609 Transposase DDE domain LDN97_RS07940 PF02685 Glucokinase LDN97_RS07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS07950 PF00072 Response regulator receiver domain LDN97_RS07950 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS07955 PF16363 GDP-mannose 4,6 dehydratase LDN97_RS07960 PF04321 RmlD substrate binding domain LDN97_RS07965 PF00483 Nucleotidyl transferase LDN97_RS07970 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LDN97_RS07975 PF01943 Polysaccharide biosynthesis protein LDN97_RS07980 PF03275 UDP-galactopyranose mutase LDN97_RS07995 PF00535 Glycosyl transferase family 2 LDN97_RS08005 PF00535 Glycosyl transferase family 2 LDN97_RS08010 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS08015 PF02397 Bacterial sugar transferase LDN97_RS08020 PF02719 Polysaccharide biosynthesis protein LDN97_RS08035 PF02706 Chain length determinant protein LDN97_RS08060 PF04337 Protein of unknown function, DUF480 LDN97_RS08065 PF04434 SWIM zinc finger LDN97_RS08065 PF00176 SNF2 family N-terminal domain LDN97_RS08065 PF00271 Helicase conserved C-terminal domain LDN97_RS08070 PF05472 DNA replication terminus site-binding protein (Ter protein) LDN97_RS08080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LDN97_RS08085 PF00676 Dehydrogenase E1 component LDN97_RS08090 PF02779 Transketolase, pyrimidine binding domain LDN97_RS08090 PF02780 Transketolase, C-terminal domain LDN97_RS08095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDN97_RS08095 PF00364 Biotin-requiring enzyme LDN97_RS08095 PF02817 e3 binding domain LDN97_RS08100 PF00313 'Cold-shock' DNA-binding domain LDN97_RS08125 PF07282 Putative transposase DNA-binding domain LDN97_RS08125 PF01385 Probable transposase LDN97_RS08125 PF12323 Helix-turn-helix domain LDN97_RS08135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS08140 PF00892 EamA-like transporter family LDN97_RS08150 PF01966 HD domain LDN97_RS08155 PF00849 RNA pseudouridylate synthase LDN97_RS08155 PF01479 S4 domain LDN97_RS08165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS08175 PF12323 Helix-turn-helix domain LDN97_RS08175 PF01385 Probable transposase LDN97_RS08175 PF07282 Putative transposase DNA-binding domain LDN97_RS08180 PF12850 Calcineurin-like phosphoesterase superfamily domain LDN97_RS08195 PF13144 Chaperone for flagella basal body P-ring formation LDN97_RS08200 PF01584 CheW-like domain LDN97_RS08200 PF00072 Response regulator receiver domain LDN97_RS08205 PF03705 CheR methyltransferase, all-alpha domain LDN97_RS08205 PF01739 CheR methyltransferase, SAM binding domain LDN97_RS08210 PF00460 Flagella basal body rod protein LDN97_RS08215 PF00460 Flagella basal body rod protein LDN97_RS08215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDN97_RS08225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDN97_RS08225 PF07559 Flagellar basal body protein FlaE LDN97_RS08225 PF00460 Flagella basal body rod protein LDN97_RS08230 PF00460 Flagella basal body rod protein LDN97_RS08230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDN97_RS08235 PF00460 Flagella basal body rod protein LDN97_RS08235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDN97_RS08240 PF02107 Flagellar L-ring protein LDN97_RS08245 PF02119 Flagellar P-ring protein LDN97_RS08250 PF10135 Rod binding protein LDN97_RS08250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDN97_RS08255 PF07196 Flagellin hook IN motif LDN97_RS08255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDN97_RS08265 PF03448 MgtE intracellular N domain LDN97_RS08265 PF00571 CBS domain LDN97_RS08265 PF01769 Divalent cation transporter LDN97_RS08270 PF02541 Ppx/GppA phosphatase family LDN97_RS08275 PF13090 Polyphosphate kinase C-terminal domain 2 LDN97_RS08275 PF02503 Polyphosphate kinase middle domain LDN97_RS08275 PF13089 Polyphosphate kinase N-terminal domain LDN97_RS08275 PF17941 Polyphosphate kinase C-terminal domain 1 LDN97_RS08280 PF01842 ACT domain LDN97_RS08290 PF06490 Flagellar regulatory protein FleQ LDN97_RS08290 PF02954 Bacterial regulatory protein, Fis family LDN97_RS08290 PF00158 Sigma-54 interaction domain LDN97_RS08295 PF13188 PAS domain LDN97_RS08295 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS08300 PF00158 Sigma-54 interaction domain LDN97_RS08300 PF02954 Bacterial regulatory protein, Fis family LDN97_RS08300 PF00072 Response regulator receiver domain LDN97_RS08305 PF01784 NIF3 (NGG1p interacting factor 3) LDN97_RS08310 PF00551 Formyl transferase LDN97_RS08315 PF00586 AIR synthase related protein, N-terminal domain LDN97_RS08315 PF02769 AIR synthase related protein, C-terminal domain LDN97_RS08330 PF00308 Bacterial dnaA protein LDN97_RS08335 PF00463 Isocitrate lyase family LDN97_RS08340 PF01274 Malate synthase LDN97_RS08355 PF14437 MafB19-like deaminase LDN97_RS08360 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS08365 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS08370 PF00005 ABC transporter LDN97_RS08375 PF01895 PhoU domain LDN97_RS08380 PF00571 CBS domain LDN97_RS08380 PF03471 Transporter associated domain LDN97_RS08380 PF01595 Cyclin M transmembrane N-terminal domain LDN97_RS08390 PF02310 B12 binding domain LDN97_RS08390 PF02607 B12 binding domain LDN97_RS08390 PF02965 Vitamin B12 dependent methionine synthase, activation domain LDN97_RS08390 PF00809 Pterin binding enzyme LDN97_RS08390 PF02574 Homocysteine S-methyltransferase LDN97_RS08395 PF13520 Amino acid permease LDN97_RS08400 PF04116 Fatty acid hydroxylase superfamily LDN97_RS08405 PF00005 ABC transporter LDN97_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS08415 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS08420 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS08420 PF08448 PAS fold LDN97_RS08425 PF01272 Transcription elongation factor, GreA/GreB, C-term LDN97_RS08425 PF14760 Rnk N-terminus LDN97_RS08440 PF00245 Alkaline phosphatase LDN97_RS08445 PF00245 Alkaline phosphatase LDN97_RS08450 PF01926 50S ribosome-binding GTPase LDN97_RS08455 PF07690 Major Facilitator Superfamily LDN97_RS08460 PF00850 Histone deacetylase domain LDN97_RS08470 PF13307 Helicase C-terminal domain LDN97_RS08470 PF06733 DEAD_2 LDN97_RS08485 PF00155 Aminotransferase class I and II LDN97_RS08490 PF05872 Bacterial protein of unknown function (DUF853) LDN97_RS08505 PF00753 Metallo-beta-lactamase superfamily LDN97_RS08505 PF03772 Competence protein LDN97_RS08510 PF00664 ABC transporter transmembrane region LDN97_RS08510 PF00005 ABC transporter LDN97_RS08515 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LDN97_RS08520 PF03966 Trm112p-like protein LDN97_RS08525 PF02348 Cytidylyltransferase LDN97_RS08530 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS08530 PF00072 Response regulator receiver domain LDN97_RS08535 PF02151 UvrB/uvrC motif LDN97_RS08535 PF08459 UvrC Helix-hairpin-helix N-terminal LDN97_RS08535 PF01541 GIY-YIG catalytic domain LDN97_RS08540 PF01066 CDP-alcohol phosphatidyltransferase LDN97_RS08565 PF00107 Zinc-binding dehydrogenase LDN97_RS08565 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS08570 PF16925 Tetracyclin repressor-like, C-terminal domain LDN97_RS08570 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS08575 PF04226 Transglycosylase associated protein LDN97_RS08580 PF00149 Calcineurin-like phosphoesterase LDN97_RS08590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDN97_RS08595 PF09190 DALR domain LDN97_RS08595 PF01406 tRNA synthetases class I (C) catalytic domain LDN97_RS08620 PF00580 UvrD/REP helicase N-terminal domain LDN97_RS08620 PF13361 UvrD-like helicase C-terminal domain LDN97_RS08630 PF13808 DDE_Tnp_1-associated LDN97_RS08630 PF01609 Transposase DDE domain LDN97_RS08640 PF13185 GAF domain LDN97_RS08640 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS08675 PF01169 Uncharacterized protein family UPF0016 LDN97_RS08680 PF01253 Translation initiation factor SUI1 LDN97_RS08690 PF07670 Nucleoside recognition LDN97_RS08690 PF02421 Ferrous iron transport protein B LDN97_RS08690 PF17910 FeoB cytosolic helical domain LDN97_RS08690 PF07664 Ferrous iron transport protein B C terminus LDN97_RS08700 PF00437 Type II/IV secretion system protein LDN97_RS08715 PF01032 FecCD transport family LDN97_RS08720 PF00005 ABC transporter LDN97_RS08725 PF00793 DAHP synthetase I family LDN97_RS08730 PF01219 Prokaryotic diacylglycerol kinase LDN97_RS08735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDN97_RS08735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDN97_RS08735 PF01842 ACT domain LDN97_RS08740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDN97_RS08745 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDN97_RS08755 PF01113 Dihydrodipicolinate reductase, N-terminus LDN97_RS08755 PF05173 Dihydrodipicolinate reductase, C-terminus LDN97_RS08760 PF00117 Glutamine amidotransferase class-I LDN97_RS08760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDN97_RS08765 PF02142 MGS-like domain LDN97_RS08765 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDN97_RS08765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDN97_RS08770 PF08502 LeuA allosteric (dimerisation) domain LDN97_RS08770 PF00682 HMGL-like LDN97_RS08775 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS08780 PF07759 Protein of unknown function (DUF1615) LDN97_RS08800 PF00270 DEAD/DEAH box helicase LDN97_RS08800 PF00271 Helicase conserved C-terminal domain LDN97_RS08810 PF14521 Lysine-specific metallo-endopeptidase LDN97_RS08835 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS08840 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS08845 PF00005 ABC transporter LDN97_RS08850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDN97_RS08850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS08855 PF01645 Conserved region in glutamate synthase LDN97_RS08855 PF01493 GXGXG motif LDN97_RS08855 PF00310 Glutamine amidotransferases class-II LDN97_RS08855 PF04898 Glutamate synthase central domain LDN97_RS08860 PF16199 Radical_SAM C-terminal domain LDN97_RS08860 PF04055 Radical SAM superfamily LDN97_RS08865 PF03412 Peptidase C39 family LDN97_RS08865 PF00005 ABC transporter LDN97_RS08865 PF00664 ABC transporter transmembrane region LDN97_RS08905 PF00324 Amino acid permease LDN97_RS08915 PF03618 Kinase/pyrophosphorylase LDN97_RS08920 PF02896 PEP-utilising enzyme, TIM barrel domain LDN97_RS08920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDN97_RS08920 PF00391 PEP-utilising enzyme, mobile domain LDN97_RS08925 PF00005 ABC transporter LDN97_RS08945 PF03180 NLPA lipoprotein LDN97_RS08950 PF01569 PAP2 superfamily LDN97_RS08955 PF11890 Domain of unknown function (DUF3410) LDN97_RS08955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDN97_RS08955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDN97_RS08960 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDN97_RS08960 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDN97_RS08970 PF01416 tRNA pseudouridine synthase LDN97_RS08975 PF17848 Acetyl-coA carboxylase zinc finger domain LDN97_RS08975 PF01039 Carboxyl transferase domain LDN97_RS08980 PF08245 Mur ligase middle domain LDN97_RS08980 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS08985 PF05036 Sporulation related domain LDN97_RS08990 PF04358 DsrC like protein LDN97_RS08995 PF12805 FUSC-like inner membrane protein yccS LDN97_RS09005 PF01027 Inhibitor of apoptosis-promoting Bax1 LDN97_RS09015 PF00593 TonB dependent receptor LDN97_RS09015 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS09015 PF07660 Secretin and TonB N terminus short domain LDN97_RS09025 PF04303 PrpF protein LDN97_RS09030 PF00330 Aconitase family (aconitate hydratase) LDN97_RS09030 PF00694 Aconitase C-terminal domain LDN97_RS09035 PF00285 Citrate synthase, C-terminal domain LDN97_RS09045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS09045 PF08447 PAS fold LDN97_RS09050 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS09050 PF00563 EAL domain LDN97_RS09050 PF13426 PAS domain LDN97_RS09055 PF00849 RNA pseudouridylate synthase LDN97_RS09065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS09070 PF04209 homogentisate 1,2-dioxygenase LDN97_RS09080 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS09080 PF14497 Glutathione S-transferase, C-terminal domain LDN97_RS09095 PF00733 Asparagine synthase LDN97_RS09095 PF13537 Glutamine amidotransferase domain LDN97_RS09105 PF13344 Haloacid dehalogenase-like hydrolase LDN97_RS09110 PF00962 Adenosine/AMP deaminase LDN97_RS09115 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS09115 PF00107 Zinc-binding dehydrogenase LDN97_RS09120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS09125 PF03741 Integral membrane protein TerC family LDN97_RS09125 PF03471 Transporter associated domain LDN97_RS09135 PF13183 4Fe-4S dicluster domain LDN97_RS09135 PF01565 FAD binding domain LDN97_RS09135 PF02913 FAD linked oxidases, C-terminal domain LDN97_RS09145 PF03061 Thioesterase superfamily LDN97_RS09150 PF03880 DbpA RNA binding domain LDN97_RS09150 PF00271 Helicase conserved C-terminal domain LDN97_RS09150 PF00270 DEAD/DEAH box helicase LDN97_RS09160 PF08447 PAS fold LDN97_RS09160 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS09160 PF00563 EAL domain LDN97_RS09160 PF08448 PAS fold LDN97_RS09165 PF03466 LysR substrate binding domain LDN97_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS09170 PF07690 Major Facilitator Superfamily LDN97_RS09175 PF13726 Na+-H+ antiporter family LDN97_RS09175 PF03553 Na+/H+ antiporter family LDN97_RS09180 PF00929 Exonuclease LDN97_RS09185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS09185 PF00672 HAMP domain LDN97_RS09185 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS09190 PF18393 MotY N-terminal domain LDN97_RS09190 PF00691 OmpA family LDN97_RS09195 PF00459 Inositol monophosphatase family LDN97_RS09205 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS09205 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS09210 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS09210 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS09225 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS09230 PF00005 ABC transporter LDN97_RS09230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS09235 PF07690 Major Facilitator Superfamily LDN97_RS09245 PF05164 Cell division protein ZapA LDN97_RS09250 PF03695 Uncharacterised protein family (UPF0149) LDN97_RS09255 PF01494 FAD binding domain LDN97_RS09260 PF01494 FAD binding domain LDN97_RS09265 PF08669 Glycine cleavage T-protein C-terminal barrel domain LDN97_RS09265 PF01571 Aminomethyltransferase folate-binding domain LDN97_RS09270 PF01597 Glycine cleavage H-protein LDN97_RS09275 PF02347 Glycine cleavage system P-protein LDN97_RS09285 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS09285 PF00501 AMP-binding enzyme LDN97_RS09285 PF00391 PEP-utilising enzyme, mobile domain LDN97_RS09285 PF00550 Phosphopantetheine attachment site LDN97_RS09285 PF00975 Thioesterase domain LDN97_RS09285 PF00668 Condensation domain LDN97_RS09285 PF08241 Methyltransferase domain LDN97_RS09295 PF07690 Major Facilitator Superfamily LDN97_RS09300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS09300 PF13192 Thioredoxin domain LDN97_RS09305 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDN97_RS09305 PF00578 AhpC/TSA family LDN97_RS09310 PF00571 CBS domain LDN97_RS09315 PF02547 Queuosine biosynthesis protein LDN97_RS09320 PF01702 Queuine tRNA-ribosyltransferase LDN97_RS09325 PF02699 Preprotein translocase subunit LDN97_RS09330 PF13721 SecD export protein N-terminal TM region LDN97_RS09330 PF07549 SecD/SecF GG Motif LDN97_RS09330 PF02355 Protein export membrane protein LDN97_RS09335 PF02355 Protein export membrane protein LDN97_RS09335 PF07549 SecD/SecF GG Motif LDN97_RS09340 PF00581 Rhodanese-like domain LDN97_RS09345 PF07719 Tetratricopeptide repeat LDN97_RS09345 PF13181 Tetratricopeptide repeat LDN97_RS09350 PF01136 Peptidase family U32 LDN97_RS09355 PF01136 Peptidase family U32 LDN97_RS09360 PF02036 SCP-2 sterol transfer family LDN97_RS09365 PF00588 SpoU rRNA Methylase family LDN97_RS09370 PF02082 Transcriptional regulator LDN97_RS09375 PF00266 Aminotransferase class-V LDN97_RS09380 PF01592 NifU-like N terminal domain LDN97_RS09385 PF01521 Iron-sulphur cluster biosynthesis LDN97_RS09390 PF07743 HSCB C-terminal oligomerisation domain LDN97_RS09390 PF00226 DnaJ domain LDN97_RS09395 PF00012 Hsp70 protein LDN97_RS09400 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS09405 PF00883 Cytosol aminopeptidase family, catalytic domain LDN97_RS09405 PF12404 Peptidase LDN97_RS09410 PF00883 Cytosol aminopeptidase family, catalytic domain LDN97_RS09410 PF12404 Peptidase LDN97_RS09415 PF00334 Nucleoside diphosphate kinase LDN97_RS09420 PF04055 Radical SAM superfamily LDN97_RS09430 PF13464 Domain of unknown function (DUF4115) LDN97_RS09435 PF04551 GcpE protein LDN97_RS09440 PF03129 Anticodon binding domain LDN97_RS09440 PF13393 Histidyl-tRNA synthetase LDN97_RS09445 PF09976 Tetratricopeptide repeat-like domain LDN97_RS09450 PF13360 PQQ-like domain LDN97_RS09455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDN97_RS09455 PF01926 50S ribosome-binding GTPase LDN97_RS09460 PF07191 zinc-ribbons LDN97_RS09465 PF01464 Transglycosylase SLT domain LDN97_RS09465 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS09470 PF02769 AIR synthase related protein, C-terminal domain LDN97_RS09470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDN97_RS09470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LDN97_RS09475 PF00361 Proton-conducting membrane transporter LDN97_RS09480 PF00361 Proton-conducting membrane transporter LDN97_RS09485 PF00361 Proton-conducting membrane transporter LDN97_RS09485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDN97_RS09490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDN97_RS09495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LDN97_RS09500 PF12838 4Fe-4S dicluster domain LDN97_RS09505 PF00146 NADH dehydrogenase LDN97_RS09510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDN97_RS09510 PF00384 Molybdopterin oxidoreductase LDN97_RS09510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LDN97_RS09515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDN97_RS09515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDN97_RS09525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDN97_RS09525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDN97_RS09530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDN97_RS09535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LDN97_RS09540 PF00691 OmpA family LDN97_RS09540 PF13677 Membrane MotB of proton-channel complex MotA/MotB LDN97_RS09545 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS09555 PF00665 Integrase core domain LDN97_RS09560 PF01695 IstB-like ATP binding protein LDN97_RS09590 PF00589 Phage integrase family LDN97_RS09590 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS09610 PF04536 TPM domain LDN97_RS09620 PF03411 Penicillin-insensitive murein endopeptidase LDN97_RS09630 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LDN97_RS09635 PF00248 Aldo/keto reductase family LDN97_RS09650 PF01212 Beta-eliminating lyase LDN97_RS09660 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS09660 PF00072 Response regulator receiver domain LDN97_RS09665 PF03466 LysR substrate binding domain LDN97_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS09675 PF00563 EAL domain LDN97_RS09675 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS09675 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS09675 PF13188 PAS domain LDN97_RS09680 PF03806 AbgT putative transporter family LDN97_RS09685 PF00881 Nitroreductase family LDN97_RS09700 PF07690 Major Facilitator Superfamily LDN97_RS09705 PF03466 LysR substrate binding domain LDN97_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS09710 PF00925 GTP cyclohydrolase II LDN97_RS09715 PF02224 Cytidylate kinase LDN97_RS09720 PF00575 S1 RNA binding domain LDN97_RS09725 PF00216 Bacterial DNA-binding protein LDN97_RS09735 PF18073 Rubredoxin metal binding domain LDN97_RS09740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDN97_RS09755 PF06508 Queuosine biosynthesis protein QueC LDN97_RS09760 PF04055 Radical SAM superfamily LDN97_RS09765 PF12843 Putative quorum-sensing-regulated virulence factor LDN97_RS09770 PF01923 Cobalamin adenosyltransferase LDN97_RS09775 PF00816 H-NS histone family LDN97_RS09780 PF03553 Na+/H+ antiporter family LDN97_RS09785 PF00265 Thymidine kinase LDN97_RS09795 PF10722 Putative bacterial sensory transduction regulator LDN97_RS09805 PF01380 SIS domain LDN97_RS09805 PF01418 Helix-turn-helix domain, rpiR family LDN97_RS09810 PF02378 Phosphotransferase system, EIIC LDN97_RS09810 PF00367 phosphotransferase system, EIIB LDN97_RS09810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDN97_RS09815 PF00232 Glycosyl hydrolase family 1 LDN97_RS09835 PF00141 Peroxidase LDN97_RS09855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDN97_RS09855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDN97_RS09860 PF01053 Cys/Met metabolism PLP-dependent enzyme LDN97_RS09870 PF13460 NAD(P)H-binding LDN97_RS09875 PF03466 LysR substrate binding domain LDN97_RS09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS09880 PF02311 AraC-like ligand binding domain LDN97_RS09880 PF12833 Helix-turn-helix domain LDN97_RS09885 PF00563 EAL domain LDN97_RS09885 PF12792 CSS motif domain associated with EAL LDN97_RS09890 PF17158 Membrane-associated sensor, integral membrane domain LDN97_RS09890 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS09895 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS09895 PF00593 TonB dependent receptor LDN97_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS09905 PF03466 LysR substrate binding domain LDN97_RS09910 PF08267 Cobalamin-independent synthase, N-terminal domain LDN97_RS09910 PF01717 Cobalamin-independent synthase, Catalytic domain LDN97_RS09920 PF00571 CBS domain LDN97_RS09920 PF01743 Poly A polymerase head domain LDN97_RS09925 PF01266 FAD dependent oxidoreductase LDN97_RS09930 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LDN97_RS09940 PF00768 D-alanyl-D-alanine carboxypeptidase LDN97_RS09945 PF03918 Cytochrome C biogenesis protein LDN97_RS09950 PF08534 Redoxin LDN97_RS09955 PF01578 Cytochrome C assembly protein LDN97_RS09955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LDN97_RS09960 PF03916 Polysulphide reductase, NrfD LDN97_RS09965 PF00037 4Fe-4S binding domain LDN97_RS09965 PF13247 4Fe-4S dicluster domain LDN97_RS09970 PF13435 Cytochrome c554 and c-prime LDN97_RS09970 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LDN97_RS09975 PF02335 Cytochrome c552 LDN97_RS09990 PF02754 Cysteine-rich domain LDN97_RS09990 PF13183 4Fe-4S dicluster domain LDN97_RS10000 PF00890 FAD binding domain LDN97_RS10005 PF04324 BFD-like [2Fe-2S] binding domain LDN97_RS10005 PF01266 FAD dependent oxidoreductase LDN97_RS10010 PF02810 SEC-C motif LDN97_RS10015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS10015 PF00672 HAMP domain LDN97_RS10015 PF17200 Single Cache domain 2 LDN97_RS10020 PF01047 MarR family LDN97_RS10020 PF00480 ROK family LDN97_RS10025 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LDN97_RS10025 PF17203 Single cache domain 3 LDN97_RS10025 PF00989 PAS fold LDN97_RS10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS10030 PF00072 Response regulator receiver domain LDN97_RS10035 PF01970 Tripartite tricarboxylate transporter TctA family LDN97_RS10050 PF10145 Phage-related minor tail protein LDN97_RS10050 PF01464 Transglycosylase SLT domain LDN97_RS10050 PF01551 Peptidase family M23 LDN97_RS10055 PF02080 TrkA-C domain LDN97_RS10055 PF06826 Predicted Permease Membrane Region LDN97_RS10065 PF17757 UvrB interaction domain LDN97_RS10065 PF00271 Helicase conserved C-terminal domain LDN97_RS10065 PF04851 Type III restriction enzyme, res subunit LDN97_RS10065 PF02151 UvrB/uvrC motif LDN97_RS10065 PF12344 Ultra-violet resistance protein B LDN97_RS10075 PF09335 SNARE associated Golgi protein LDN97_RS10080 PF02600 Disulfide bond formation protein DsbB LDN97_RS10085 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LDN97_RS10090 PF07840 FadR C-terminal domain LDN97_RS10090 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS10095 PF04293 SpoVR like protein LDN97_RS10100 PF04285 Protein of unknown function (DUF444) LDN97_RS10105 PF06798 PrkA serine protein kinase C-terminal domain LDN97_RS10105 PF08298 PrkA AAA domain LDN97_RS10110 PF16124 RecQ zinc-binding LDN97_RS10110 PF00270 DEAD/DEAH box helicase LDN97_RS10110 PF00271 Helicase conserved C-terminal domain LDN97_RS10110 PF00570 HRDC domain LDN97_RS10110 PF09382 RQC domain LDN97_RS10115 PF00375 Sodium:dicarboxylate symporter family LDN97_RS10120 PF03222 Tryptophan/tyrosine permease family LDN97_RS10125 PF00293 NUDIX domain LDN97_RS10130 PF00425 chorismate binding enzyme LDN97_RS10130 PF04715 Anthranilate synthase component I, N terminal region LDN97_RS10150 PF00343 Carbohydrate phosphorylase LDN97_RS10160 PF00939 Sodium:sulfate symporter transmembrane region LDN97_RS10165 PF00085 Thioredoxin LDN97_RS10170 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS10170 PF00672 HAMP domain LDN97_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS10170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDN97_RS10170 PF01627 Hpt domain LDN97_RS10170 PF00072 Response regulator receiver domain LDN97_RS10175 PF00005 ABC transporter LDN97_RS10175 PF00664 ABC transporter transmembrane region LDN97_RS10180 PF00664 ABC transporter transmembrane region LDN97_RS10180 PF00005 ABC transporter LDN97_RS10210 PF01575 MaoC like domain LDN97_RS10215 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LDN97_RS10215 PF00561 alpha/beta hydrolase fold LDN97_RS10235 PF08543 Phosphomethylpyrimidine kinase LDN97_RS10240 PF03992 Antibiotic biosynthesis monooxygenase LDN97_RS10245 PF13673 Acetyltransferase (GNAT) domain LDN97_RS10255 PF01928 CYTH domain LDN97_RS10265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LDN97_RS10275 PF13673 Acetyltransferase (GNAT) domain LDN97_RS10280 PF00271 Helicase conserved C-terminal domain LDN97_RS10280 PF00270 DEAD/DEAH box helicase LDN97_RS10285 PF00255 Glutathione peroxidase LDN97_RS10295 PF01820 D-ala D-ala ligase N-terminus LDN97_RS10295 PF07478 D-ala D-ala ligase C-terminus LDN97_RS10300 PF03942 DTW domain LDN97_RS10310 PF01925 Sulfite exporter TauE/SafE LDN97_RS10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS10315 PF03466 LysR substrate binding domain LDN97_RS10330 PF11398 Protein of unknown function (DUF2813) LDN97_RS10365 PF00883 Cytosol aminopeptidase family, catalytic domain LDN97_RS10365 PF02789 Cytosol aminopeptidase family, N-terminal domain LDN97_RS10370 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS10375 PF01546 Peptidase family M20/M25/M40 LDN97_RS10375 PF07687 Peptidase dimerisation domain LDN97_RS10380 PF00365 Phosphofructokinase LDN97_RS10385 PF00121 Triosephosphate isomerase LDN97_RS10390 PF02698 DUF218 domain LDN97_RS10395 PF13847 Methyltransferase domain LDN97_RS10400 PF17193 MukF C-terminal domain LDN97_RS10400 PF17192 MukF middle domain LDN97_RS10400 PF03882 MukF winged-helix domain LDN97_RS10405 PF04288 MukE-like family LDN97_RS10410 PF04310 MukB N-terminal LDN97_RS10410 PF16330 MukB hinge domain LDN97_RS10415 PF03330 Lytic transglycolase LDN97_RS10415 PF05036 Sporulation related domain LDN97_RS10420 PF00690 Cation transporter/ATPase, N-terminus LDN97_RS10420 PF00689 Cation transporting ATPase, C-terminus LDN97_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS10445 PF03466 LysR substrate binding domain LDN97_RS10450 PF01048 Phosphorylase superfamily LDN97_RS10455 PF01773 Na+ dependent nucleoside transporter N-terminus LDN97_RS10455 PF07670 Nucleoside recognition LDN97_RS10455 PF07662 Na+ dependent nucleoside transporter C-terminus LDN97_RS10460 PF01791 DeoC/LacD family aldolase LDN97_RS10485 PF01810 LysE type translocator LDN97_RS10490 PF08274 PhnA Zinc-Ribbon LDN97_RS10490 PF03831 PhnA domain LDN97_RS10500 PF08329 Chitinase A, N-terminal domain LDN97_RS10500 PF00704 Glycosyl hydrolases family 18 LDN97_RS10525 PF01713 Smr domain LDN97_RS10530 PF05175 Methyltransferase small domain LDN97_RS10535 PF01264 Chorismate synthase LDN97_RS10545 PF00270 DEAD/DEAH box helicase LDN97_RS10545 PF00271 Helicase conserved C-terminal domain LDN97_RS10560 PF03222 Tryptophan/tyrosine permease family LDN97_RS10565 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS10565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDN97_RS10570 PF00381 PTS HPr component phosphorylation site LDN97_RS10570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDN97_RS10575 PF00294 pfkB family carbohydrate kinase LDN97_RS10580 PF02378 Phosphotransferase system, EIIC LDN97_RS10580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDN97_RS10585 PF06945 Protein of unknown function (DUF1289) LDN97_RS10590 PF03562 MltA specific insert domain LDN97_RS10590 PF06725 3D domain LDN97_RS10595 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS10600 PF00268 Ribonucleotide reductase, small chain LDN97_RS10605 PF02867 Ribonucleotide reductase, barrel domain LDN97_RS10605 PF03477 ATP cone domain LDN97_RS10605 PF00317 Ribonucleotide reductase, all-alpha domain LDN97_RS10610 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS10620 PF03989 DNA gyrase C-terminal domain, beta-propeller LDN97_RS10620 PF00521 DNA gyrase/topoisomerase IV, subunit A LDN97_RS10630 PF04055 Radical SAM superfamily LDN97_RS10645 PF03129 Anticodon binding domain LDN97_RS10645 PF02824 TGS domain LDN97_RS10645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDN97_RS10645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDN97_RS10650 PF05198 Translation initiation factor IF-3, N-terminal domain LDN97_RS10650 PF00707 Translation initiation factor IF-3, C-terminal domain LDN97_RS10655 PF01632 Ribosomal protein L35 LDN97_RS10660 PF00453 Ribosomal protein L20 LDN97_RS10815 PF00717 Peptidase S24-like LDN97_RS10820 PF00817 impB/mucB/samB family LDN97_RS10820 PF11799 impB/mucB/samB family C-terminal domain LDN97_RS10820 PF13438 Domain of unknown function (DUF4113) LDN97_RS10880 PF06892 Phage regulatory protein CII (CP76) LDN97_RS10895 PF01381 Helix-turn-helix LDN97_RS10895 PF00717 Peptidase S24-like LDN97_RS10920 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS10920 PF00589 Phage integrase family LDN97_RS10925 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDN97_RS10925 PF01409 tRNA synthetases class II core domain (F) LDN97_RS10930 PF03483 B3/4 domain LDN97_RS10930 PF03484 tRNA synthetase B5 domain LDN97_RS10930 PF03147 Ferredoxin-fold anticodon binding domain LDN97_RS10930 PF01588 Putative tRNA binding domain LDN97_RS10930 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDN97_RS10935 PF00216 Bacterial DNA-binding protein LDN97_RS10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS10940 PF00072 Response regulator receiver domain LDN97_RS10940 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS10940 PF09456 RcsC Alpha-Beta-Loop (ABL) LDN97_RS10955 PF02146 Sir2 family LDN97_RS10965 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS10965 PF00563 EAL domain LDN97_RS10965 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS10970 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS10975 PF00294 pfkB family carbohydrate kinase LDN97_RS10980 PF13407 Periplasmic binding protein domain LDN97_RS10985 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS10990 PF00005 ABC transporter LDN97_RS10995 PF05025 RbsD / FucU transport protein family LDN97_RS11000 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS11000 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS11015 PF01171 PP-loop family LDN97_RS11020 PF00582 Universal stress protein family LDN97_RS11025 PF00027 Cyclic nucleotide-binding domain LDN97_RS11025 PF13545 Crp-like helix-turn-helix domain LDN97_RS11040 PF00403 Heavy-metal-associated domain LDN97_RS11050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LDN97_RS11050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LDN97_RS11065 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDN97_RS11075 PF13185 GAF domain LDN97_RS11080 PF04352 ProQ/FINO family LDN97_RS11080 PF17516 ProQ C-terminal domain LDN97_RS11085 PF17804 Tail specific protease N-terminal domain LDN97_RS11085 PF03572 Peptidase family S41 LDN97_RS11085 PF00595 PDZ domain LDN97_RS11085 PF11818 C-terminal domain of tail specific protease (DUF3340) LDN97_RS11090 PF01433 Peptidase family M1 domain LDN97_RS11090 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LDN97_RS11090 PF11940 Domain of unknown function (DUF3458) Ig-like fold LDN97_RS11100 PF05088 Bacterial NAD-glutamate dehydrogenase LDN97_RS11105 PF01180 Dihydroorotate dehydrogenase LDN97_RS11115 PF02926 THUMP domain LDN97_RS11115 PF01170 Putative RNA methylase family UPF0020 LDN97_RS11115 PF10672 S-adenosylmethionine-dependent methyltransferase LDN97_RS11125 PF16326 ABC transporter C-terminal domain LDN97_RS11125 PF12848 ABC transporter LDN97_RS11125 PF00005 ABC transporter LDN97_RS11135 PF04957 Ribosome modulation factor LDN97_RS11140 PF07977 FabA-like domain LDN97_RS11145 PF13654 AAA domain LDN97_RS11145 PF05362 Lon protease (S16) C-terminal proteolytic domain LDN97_RS11155 PF07130 YebG protein LDN97_RS11165 PF04403 Paraquat-inducible protein A LDN97_RS11170 PF02470 MlaD protein LDN97_RS11175 PF01189 16S rRNA methyltransferase RsmB/F LDN97_RS11175 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LDN97_RS11175 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LDN97_RS11215 PF00589 Phage integrase family LDN97_RS11220 PF01026 TatD related DNase LDN97_RS11225 PF09115 DNA polymerase III, delta subunit, C terminal LDN97_RS11230 PF02223 Thymidylate kinase LDN97_RS11235 PF02618 YceG-like family LDN97_RS11240 PF01063 Amino-transferase class IV LDN97_RS11245 PF00109 Beta-ketoacyl synthase, N-terminal domain LDN97_RS11245 PF02801 Beta-ketoacyl synthase, C-terminal domain LDN97_RS11250 PF00550 Phosphopantetheine attachment site LDN97_RS11260 PF00698 Acyl transferase domain LDN97_RS11265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDN97_RS11265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDN97_RS11270 PF02504 Fatty acid synthesis protein LDN97_RS11275 PF01783 Ribosomal L32p protein family LDN97_RS11280 PF02620 Large ribosomal RNA subunit accumulation protein YceD LDN97_RS11290 PF02545 Maf-like protein LDN97_RS11295 PF00849 RNA pseudouridylate synthase LDN97_RS11295 PF01479 S4 domain LDN97_RS11300 PF12111 Polyribonucleotide phosphorylase C terminal LDN97_RS11300 PF10150 Ribonuclease E/G family LDN97_RS11300 PF00575 S1 RNA binding domain LDN97_RS11305 PF01384 Phosphate transporter family LDN97_RS11310 PF00692 dUTPase LDN97_RS11315 PF00485 Phosphoribulokinase / Uridine kinase family LDN97_RS11320 PF10609 NUBPL iron-transfer P-loop NTPase LDN97_RS11325 PF08264 Anticodon-binding domain of tRNA LDN97_RS11325 PF09334 tRNA synthetases class I (M) LDN97_RS11325 PF01588 Putative tRNA binding domain LDN97_RS11330 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS11330 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS11335 PF00708 Acylphosphatase LDN97_RS11340 PF00672 HAMP domain LDN97_RS11340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS11340 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS11345 PF17785 PUA-like domain LDN97_RS11345 PF10672 S-adenosylmethionine-dependent methyltransferase LDN97_RS11365 PF00586 AIR synthase related protein, N-terminal domain LDN97_RS11365 PF02769 AIR synthase related protein, C-terminal domain LDN97_RS11375 PF00753 Metallo-beta-lactamase superfamily LDN97_RS11380 PF00072 Response regulator receiver domain LDN97_RS11385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS11385 PF00672 HAMP domain LDN97_RS11385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDN97_RS11385 PF01627 Hpt domain LDN97_RS11385 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS11385 PF00072 Response regulator receiver domain LDN97_RS11390 PF01386 Ribosomal L25p family LDN97_RS11400 PF00271 Helicase conserved C-terminal domain LDN97_RS11400 PF00270 DEAD/DEAH box helicase LDN97_RS11400 PF11898 Domain of unknown function (DUF3418) LDN97_RS11400 PF04408 Helicase associated domain (HA2) LDN97_RS11400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LDN97_RS11405 PF02272 DHHA1 domain LDN97_RS11405 PF01743 Poly A polymerase head domain LDN97_RS11405 PF01368 DHH family LDN97_RS11405 PF00571 CBS domain LDN97_RS11410 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS11410 PF00072 Response regulator receiver domain LDN97_RS11415 PF07670 Nucleoside recognition LDN97_RS11420 PF02678 Pirin LDN97_RS11420 PF05726 Pirin C-terminal cupin domain LDN97_RS11425 PF03466 LysR substrate binding domain LDN97_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS11430 PF02575 YbaB/EbfC DNA-binding family LDN97_RS11435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LDN97_RS11435 PF12169 DNA polymerase III subunits gamma and tau domain III LDN97_RS11435 PF12170 DNA polymerase III tau subunit V interacting with alpha LDN97_RS11440 PF00156 Phosphoribosyl transferase domain LDN97_RS11445 PF04304 Protein of unknown function (DUF454) LDN97_RS11450 PF01207 Dihydrouridine synthase (Dus) LDN97_RS11460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDN97_RS11460 PF12833 Helix-turn-helix domain LDN97_RS11460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDN97_RS11460 PF02805 Metal binding domain of Ada LDN97_RS11465 PF00892 EamA-like transporter family LDN97_RS11475 PF01612 3'-5' exonuclease LDN97_RS11475 PF00570 HRDC domain LDN97_RS11480 PF00501 AMP-binding enzyme LDN97_RS11480 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS11485 PF00561 alpha/beta hydrolase fold LDN97_RS11495 PF00814 Glycoprotease family LDN97_RS11500 PF13307 Helicase C-terminal domain LDN97_RS11500 PF04851 Type III restriction enzyme, res subunit LDN97_RS11510 PF08029 HisG, C-terminal domain LDN97_RS11510 PF01634 ATP phosphoribosyltransferase LDN97_RS11515 PF00815 Histidinol dehydrogenase LDN97_RS11520 PF00155 Aminotransferase class I and II LDN97_RS11525 PF00475 Imidazoleglycerol-phosphate dehydratase LDN97_RS11525 PF08645 Polynucleotide kinase 3 phosphatase LDN97_RS11530 PF00117 Glutamine amidotransferase class-I LDN97_RS11535 PF00977 Histidine biosynthesis protein LDN97_RS11540 PF00072 Response regulator receiver domain LDN97_RS11545 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS11545 PF08448 PAS fold LDN97_RS11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS11550 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS11550 PF01627 Hpt domain LDN97_RS11550 PF00072 Response regulator receiver domain LDN97_RS11555 PF00977 Histidine biosynthesis protein LDN97_RS11560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LDN97_RS11560 PF01502 Phosphoribosyl-AMP cyclohydrolase LDN97_RS11570 PF08279 HTH domain LDN97_RS11570 PF13280 WYL domain LDN97_RS11575 PF00501 AMP-binding enzyme LDN97_RS11575 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS11580 PF05433 Glycine zipper 2TM domain LDN97_RS11595 PF01032 FecCD transport family LDN97_RS11600 PF00005 ABC transporter LDN97_RS11605 PF07690 Major Facilitator Superfamily LDN97_RS11625 PF07152 YaeQ protein LDN97_RS11635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDN97_RS11635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDN97_RS11635 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS11640 PF00108 Thiolase, N-terminal domain LDN97_RS11640 PF02803 Thiolase, C-terminal domain LDN97_RS11645 PF07726 ATPase family associated with various cellular activities (AAA) LDN97_RS11645 PF17863 AAA lid domain LDN97_RS11650 PF01882 Protein of unknown function DUF58 LDN97_RS11675 PF04542 Sigma-70 region 2 LDN97_RS11675 PF08281 Sigma-70, region 4 LDN97_RS11685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LDN97_RS11690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LDN97_RS11695 PF00563 EAL domain LDN97_RS11695 PF08668 HDOD domain LDN97_RS11700 PF00108 Thiolase, N-terminal domain LDN97_RS11700 PF02803 Thiolase, C-terminal domain LDN97_RS11705 PF00376 MerR family regulatory protein LDN97_RS11705 PF09278 MerR, DNA binding LDN97_RS11710 PF00375 Sodium:dicarboxylate symporter family LDN97_RS11715 PF06865 Pyrimidine/purine nucleoside phosphorylase LDN97_RS11720 PF03315 Serine dehydratase beta chain LDN97_RS11720 PF03313 Serine dehydratase alpha chain LDN97_RS11725 PF03313 Serine dehydratase alpha chain LDN97_RS11725 PF03315 Serine dehydratase beta chain LDN97_RS11730 PF13406 Transglycosylase SLT domain LDN97_RS11735 PF05166 YcgL domain LDN97_RS11740 PF05209 Septum formation inhibitor MinC, N-terminal domain LDN97_RS11740 PF03775 Septum formation inhibitor MinC, C-terminal domain LDN97_RS11745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDN97_RS11750 PF03776 Septum formation topological specificity factor MinE LDN97_RS11755 PF04269 Protein of unknown function, DUF440 LDN97_RS11760 PF00912 Transglycosylase LDN97_RS11765 PF04269 Protein of unknown function, DUF440 LDN97_RS11775 PF13509 S1 domain LDN97_RS11775 PF17783 CvfB-like winged helix domain LDN97_RS11800 PF02525 Flavodoxin-like fold LDN97_RS11805 PF00892 EamA-like transporter family LDN97_RS11810 PF02222 ATP-grasp domain LDN97_RS11810 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS11815 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS11830 PF01695 IstB-like ATP binding protein LDN97_RS11835 PF00665 Integrase core domain LDN97_RS11905 PF00665 Integrase core domain LDN97_RS11910 PF01695 IstB-like ATP binding protein LDN97_RS11930 PF02796 Helix-turn-helix domain of resolvase LDN97_RS11930 PF00239 Resolvase, N terminal domain LDN97_RS11955 PF00677 Lumazine binding domain LDN97_RS11960 PF06786 Uncharacterised protein family (UPF0253) LDN97_RS11965 PF01554 MatE LDN97_RS11995 PF00136 DNA polymerase family B LDN97_RS11995 PF03104 DNA polymerase family B, exonuclease domain LDN97_RS12000 PF02678 Pirin LDN97_RS12000 PF05726 Pirin C-terminal cupin domain LDN97_RS12010 PF03279 Bacterial lipid A biosynthesis acyltransferase LDN97_RS12015 PF03279 Bacterial lipid A biosynthesis acyltransferase LDN97_RS12025 PF03466 LysR substrate binding domain LDN97_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS12030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDN97_RS12030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDN97_RS12035 PF01261 Xylose isomerase-like TIM barrel LDN97_RS12040 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS12045 PF00933 Glycosyl hydrolase family 3 N terminal domain LDN97_RS12055 PF03466 LysR substrate binding domain LDN97_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS12065 PF00232 Glycosyl hydrolase family 1 LDN97_RS12070 PF03466 LysR substrate binding domain LDN97_RS12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS12075 PF00072 Response regulator receiver domain LDN97_RS12075 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS12080 PF00384 Molybdopterin oxidoreductase LDN97_RS12085 PF02634 FdhD/NarQ family LDN97_RS12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS12100 PF03466 LysR substrate binding domain LDN97_RS12105 PF13407 Periplasmic binding protein domain LDN97_RS12110 PF00005 ABC transporter LDN97_RS12115 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS12120 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS12125 PF12706 Beta-lactamase superfamily domain LDN97_RS12130 PF10711 Hypothetical protein (DUF2513) LDN97_RS12220 PF00239 Resolvase, N terminal domain LDN97_RS12220 PF02796 Helix-turn-helix domain of resolvase LDN97_RS12225 PF01043 SecA preprotein cross-linking domain LDN97_RS12225 PF07517 SecA DEAD-like domain LDN97_RS12225 PF02810 SEC-C motif LDN97_RS12225 PF07516 SecA Wing and Scaffold domain LDN97_RS12240 PF01925 Sulfite exporter TauE/SafE LDN97_RS12245 PF13520 Amino acid permease LDN97_RS12255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDN97_RS12255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDN97_RS12260 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS12265 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS12270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDN97_RS12270 PF02770 Acyl-CoA dehydrogenase, middle domain LDN97_RS12270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDN97_RS12275 PF00171 Aldehyde dehydrogenase family LDN97_RS12280 PF02770 Acyl-CoA dehydrogenase, middle domain LDN97_RS12280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDN97_RS12280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDN97_RS12285 PF01039 Carboxyl transferase domain LDN97_RS12290 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS12295 PF02785 Biotin carboxylase C-terminal domain LDN97_RS12295 PF00289 Biotin carboxylase, N-terminal domain LDN97_RS12295 PF00364 Biotin-requiring enzyme LDN97_RS12295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDN97_RS12300 PF00682 HMGL-like LDN97_RS12305 PF09278 MerR, DNA binding LDN97_RS12305 PF00376 MerR family regulatory protein LDN97_RS12315 PF01184 GPR1/FUN34/yaaH family LDN97_RS12320 PF06167 Glucose-regulated metallo-peptidase M90 LDN97_RS12330 PF01235 Sodium:alanine symporter family LDN97_RS12335 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS12350 PF04341 Protein of unknown function, DUF485 LDN97_RS12355 PF00474 Sodium:solute symporter family LDN97_RS12360 PF00005 ABC transporter LDN97_RS12360 PF12848 ABC transporter LDN97_RS12370 PF13145 PPIC-type PPIASE domain LDN97_RS12375 PF00216 Bacterial DNA-binding protein LDN97_RS12380 PF05362 Lon protease (S16) C-terminal proteolytic domain LDN97_RS12380 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS12380 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDN97_RS12385 PF07724 AAA domain (Cdc48 subfamily) LDN97_RS12385 PF10431 C-terminal, D2-small domain, of ClpB protein LDN97_RS12385 PF06689 ClpX C4-type zinc finger LDN97_RS12390 PF00574 Clp protease LDN97_RS12395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDN97_RS12395 PF05698 Bacterial trigger factor protein (TF) C-terminus LDN97_RS12395 PF05697 Bacterial trigger factor protein (TF) LDN97_RS12410 PF02687 FtsX-like permease family LDN97_RS12410 PF12704 MacB-like periplasmic core domain LDN97_RS12415 PF00005 ABC transporter LDN97_RS12420 PF02687 FtsX-like permease family LDN97_RS12420 PF12704 MacB-like periplasmic core domain LDN97_RS12435 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LDN97_RS12445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS12450 PF00892 EamA-like transporter family LDN97_RS12460 PF00300 Histidine phosphatase superfamily (branch 1) LDN97_RS12465 PF00675 Insulinase (Peptidase family M16) LDN97_RS12465 PF16187 Middle or third domain of peptidase_M16 LDN97_RS12465 PF05193 Peptidase M16 inactive domain LDN97_RS12470 PF05724 Thiopurine S-methyltransferase (TPMT) LDN97_RS12480 PF01047 MarR family LDN97_RS12500 PF02805 Metal binding domain of Ada LDN97_RS12500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDN97_RS12500 PF12833 Helix-turn-helix domain LDN97_RS12500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDN97_RS12505 PF01609 Transposase DDE domain LDN97_RS12505 PF05598 Transposase domain (DUF772) LDN97_RS12525 PF00117 Glutamine amidotransferase class-I LDN97_RS12525 PF00958 GMP synthase C terminal domain LDN97_RS12525 PF02540 NAD synthase LDN97_RS12530 PF00571 CBS domain LDN97_RS12530 PF00478 IMP dehydrogenase / GMP reductase domain LDN97_RS12540 PF00128 Alpha amylase, catalytic domain LDN97_RS12540 PF03423 Carbohydrate binding domain (family 25) LDN97_RS12540 PF01373 Glycosyl hydrolase family 14 LDN97_RS12550 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS12555 PF02472 Biopolymer transport protein ExbD/TolR LDN97_RS12565 PF02601 Exonuclease VII, large subunit LDN97_RS12565 PF13742 OB-fold nucleic acid binding domain LDN97_RS12570 PF04055 Radical SAM superfamily LDN97_RS12575 PF00691 OmpA family LDN97_RS12580 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS12580 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS12580 PF00563 EAL domain LDN97_RS12585 PF13689 YfiR/HmsC-like LDN97_RS12590 PF00158 Sigma-54 interaction domain LDN97_RS12590 PF18024 Helix-turn-helix domain LDN97_RS12595 PF01329 Pterin 4 alpha carbinolamine dehydratase LDN97_RS12600 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LDN97_RS12605 PF05128 Domain of unknown function (DUF697) LDN97_RS12610 PF04317 YcjX-like family, DUF463 LDN97_RS12620 PF06667 Phage shock protein B LDN97_RS12625 PF04012 PspA/IM30 family LDN97_RS12630 PF02954 Bacterial regulatory protein, Fis family LDN97_RS12630 PF00158 Sigma-54 interaction domain LDN97_RS12635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS12640 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS12645 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS12650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS12650 PF00005 ABC transporter LDN97_RS12655 PF00005 ABC transporter LDN97_RS12660 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LDN97_RS12665 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS12670 PF00367 phosphotransferase system, EIIB LDN97_RS12670 PF02378 Phosphotransferase system, EIIC LDN97_RS12675 PF00232 Glycosyl hydrolase family 1 LDN97_RS12680 PF00156 Phosphoribosyl transferase domain LDN97_RS12685 PF02674 Colicin V production protein LDN97_RS12690 PF02403 Seryl-tRNA synthetase N-terminal domain LDN97_RS12690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDN97_RS12695 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS12695 PF16193 AAA C-terminal domain LDN97_RS12695 PF12002 MgsA AAA+ ATPase C terminal LDN97_RS12700 PF03548 Outer membrane lipoprotein carrier protein LolA LDN97_RS12705 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LDN97_RS12705 PF17854 FtsK alpha domain LDN97_RS12705 PF01580 FtsK/SpoIIIE family LDN97_RS12705 PF09397 Ftsk gamma domain LDN97_RS12710 PF01037 Lrp/AsnC ligand binding domain LDN97_RS12715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDN97_RS12715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LDN97_RS12725 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS12730 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS12730 PF05230 MASE2 domain LDN97_RS12735 PF05433 Glycine zipper 2TM domain LDN97_RS12740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LDN97_RS12745 PF04377 Arginine-tRNA-protein transferase, C terminus LDN97_RS12745 PF04376 Arginine-tRNA-protein transferase, N terminus LDN97_RS12750 PF01176 Translation initiation factor 1A / IF-1 LDN97_RS12755 PF07724 AAA domain (Cdc48 subfamily) LDN97_RS12755 PF17871 AAA lid domain LDN97_RS12755 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS12755 PF02861 Clp amino terminal domain, pathogenicity island component LDN97_RS12755 PF10431 C-terminal, D2-small domain, of ClpB protein LDN97_RS12760 PF02617 ATP-dependent Clp protease adaptor protein ClpS LDN97_RS12765 PF00313 'Cold-shock' DNA-binding domain LDN97_RS12770 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDN97_RS12770 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDN97_RS12775 PF00893 Small Multidrug Resistance protein LDN97_RS12785 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LDN97_RS12785 PF18381 YcaO cyclodehydratase C-terminal domain LDN97_RS12790 PF01226 Formate/nitrite transporter LDN97_RS12795 PF02901 Pyruvate formate lyase-like LDN97_RS12795 PF01228 Glycine radical LDN97_RS12820 PF00665 Integrase core domain LDN97_RS12825 PF01695 IstB-like ATP binding protein LDN97_RS12850 PF00549 CoA-ligase LDN97_RS12850 PF02629 CoA binding domain LDN97_RS12855 PF00549 CoA-ligase LDN97_RS12855 PF08442 ATP-grasp domain LDN97_RS12860 PF00364 Biotin-requiring enzyme LDN97_RS12860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDN97_RS12860 PF02817 e3 binding domain LDN97_RS12865 PF16870 2-oxoglutarate dehydrogenase C-terminal LDN97_RS12865 PF02779 Transketolase, pyrimidine binding domain LDN97_RS12865 PF00676 Dehydrogenase E1 component LDN97_RS12865 PF16078 2-oxoglutarate dehydrogenase N-terminus LDN97_RS12870 PF13085 2Fe-2S iron-sulfur cluster binding domain LDN97_RS12875 PF00890 FAD binding domain LDN97_RS12875 PF02910 Fumarate reductase flavoprotein C-term LDN97_RS12880 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDN97_RS12885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDN97_RS12890 PF00285 Citrate synthase, C-terminal domain LDN97_RS12905 PF00109 Beta-ketoacyl synthase, N-terminal domain LDN97_RS12905 PF02801 Beta-ketoacyl synthase, C-terminal domain LDN97_RS12910 PF01266 FAD dependent oxidoreductase LDN97_RS12910 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LDN97_RS12920 PF03606 C4-dicarboxylate anaerobic carrier LDN97_RS12935 PF01863 Protein of unknown function DUF45 LDN97_RS12950 PF01197 Ribosomal protein L31 LDN97_RS12955 PF00444 Ribosomal protein L36 LDN97_RS12960 PF02311 AraC-like ligand binding domain LDN97_RS12960 PF12833 Helix-turn-helix domain LDN97_RS12965 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS12970 PF00005 ABC transporter LDN97_RS12975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDN97_RS12980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDN97_RS12985 PF00596 Class II Aldolase and Adducin N-terminal domain LDN97_RS12990 PF11762 L-arabinose isomerase C-terminal domain LDN97_RS12990 PF02610 L-arabinose isomerase LDN97_RS13005 PF17757 UvrB interaction domain LDN97_RS13005 PF12344 Ultra-violet resistance protein B LDN97_RS13005 PF00271 Helicase conserved C-terminal domain LDN97_RS13005 PF04851 Type III restriction enzyme, res subunit LDN97_RS13005 PF02151 UvrB/uvrC motif LDN97_RS13010 PF00270 DEAD/DEAH box helicase LDN97_RS13010 PF00570 HRDC domain LDN97_RS13010 PF00271 Helicase conserved C-terminal domain LDN97_RS13010 PF16124 RecQ zinc-binding LDN97_RS13010 PF09382 RQC domain LDN97_RS13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS13015 PF03466 LysR substrate binding domain LDN97_RS13020 PF00155 Aminotransferase class I and II LDN97_RS13025 PF00795 Carbon-nitrogen hydrolase LDN97_RS13030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS13040 PF03706 Lysylphosphatidylglycerol synthase TM region LDN97_RS13040 PF09924 Uncharacterised conserved protein (DUF2156) LDN97_RS13045 PF00149 Calcineurin-like phosphoesterase LDN97_RS13055 PF00224 Pyruvate kinase, barrel domain LDN97_RS13055 PF02887 Pyruvate kinase, alpha/beta domain LDN97_RS13060 PF07745 Glycosyl hydrolase family 53 LDN97_RS13065 PF00367 phosphotransferase system, EIIB LDN97_RS13065 PF02378 Phosphotransferase system, EIIC LDN97_RS13070 PF08532 Beta-galactosidase trimerisation domain LDN97_RS13070 PF08533 Beta-galactosidase C-terminal domain LDN97_RS13070 PF02449 Beta-galactosidase LDN97_RS13075 PF07745 Glycosyl hydrolase family 53 LDN97_RS13080 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS13085 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS13090 PF13416 Bacterial extracellular solute-binding protein LDN97_RS13095 PF00005 ABC transporter LDN97_RS13095 PF17912 MalK OB fold domain LDN97_RS13100 PF00672 HAMP domain LDN97_RS13100 PF02743 Cache domain LDN97_RS13100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS13110 PF07745 Glycosyl hydrolase family 53 LDN97_RS13115 PF02264 LamB porin LDN97_RS13120 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS13125 PF16363 GDP-mannose 4,6 dehydratase LDN97_RS13135 PF01695 IstB-like ATP binding protein LDN97_RS13140 PF00665 Integrase core domain LDN97_RS13150 PF10509 Galactokinase galactose-binding signature LDN97_RS13150 PF08544 GHMP kinases C terminal LDN97_RS13150 PF00288 GHMP kinases N terminal domain LDN97_RS13175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS13235 PF17482 Phage tail sheath C-terminal domain LDN97_RS13235 PF04984 Phage tail sheath protein subtilisin-like domain LDN97_RS13245 PF07484 Phage Tail Collar Domain LDN97_RS13345 PF05866 Endodeoxyribonuclease RusA LDN97_RS13430 PF05154 TM2 domain LDN97_RS13485 PF00436 Single-strand binding protein family LDN97_RS13500 PF13356 Arm DNA-binding domain LDN97_RS13500 PF14659 Phage integrase, N-terminal SAM-like domain LDN97_RS13500 PF00589 Phage integrase family LDN97_RS13505 PF08411 Exonuclease C-terminal LDN97_RS13505 PF00929 Exonuclease LDN97_RS13520 PF03788 LrgA family LDN97_RS13525 PF04172 LrgB-like family LDN97_RS13530 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LDN97_RS13530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDN97_RS13535 PF00501 AMP-binding enzyme LDN97_RS13540 PF08891 YfcL protein LDN97_RS13550 PF03741 Integral membrane protein TerC family LDN97_RS13555 PF00793 DAHP synthetase I family LDN97_RS13560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDN97_RS13565 PF00266 Aminotransferase class-V LDN97_RS13570 PF01012 Electron transfer flavoprotein domain LDN97_RS13570 PF00766 Electron transfer flavoprotein FAD-binding domain LDN97_RS13575 PF01012 Electron transfer flavoprotein domain LDN97_RS13585 PF01544 CorA-like Mg2+ transporter protein LDN97_RS13590 PF11143 Protein of unknown function (DUF2919) LDN97_RS13605 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS13605 PF00593 TonB dependent receptor LDN97_RS13610 PF01032 FecCD transport family LDN97_RS13615 PF01032 FecCD transport family LDN97_RS13620 PF00005 ABC transporter LDN97_RS13625 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LDN97_RS13625 PF01648 4'-phosphopantetheinyl transferase superfamily LDN97_RS13630 PF01497 Periplasmic binding protein LDN97_RS13635 PF00550 Phosphopantetheine attachment site LDN97_RS13635 PF00668 Condensation domain LDN97_RS13635 PF00501 AMP-binding enzyme LDN97_RS13635 PF00975 Thioesterase domain LDN97_RS13635 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS13640 PF00501 AMP-binding enzyme LDN97_RS13640 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS13640 PF00668 Condensation domain LDN97_RS13640 PF07993 Male sterility protein LDN97_RS13640 PF00550 Phosphopantetheine attachment site LDN97_RS13650 PF00975 Thioesterase domain LDN97_RS13650 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS13650 PF00501 AMP-binding enzyme LDN97_RS13650 PF00668 Condensation domain LDN97_RS13650 PF00550 Phosphopantetheine attachment site LDN97_RS13655 PF00857 Isochorismatase family LDN97_RS13655 PF00550 Phosphopantetheine attachment site LDN97_RS13660 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS13660 PF00501 AMP-binding enzyme LDN97_RS13665 PF00425 chorismate binding enzyme LDN97_RS13670 PF07273 Protein of unknown function (DUF1439) LDN97_RS13680 PF00483 Nucleotidyl transferase LDN97_RS13685 PF00563 EAL domain LDN97_RS13685 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS13685 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS13700 PF00672 HAMP domain LDN97_RS13700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS13700 PF17200 Single Cache domain 2 LDN97_RS13705 PF00294 pfkB family carbohydrate kinase LDN97_RS13710 PF01124 MAPEG family LDN97_RS13715 PF00762 Ferrochelatase LDN97_RS13720 PF05191 Adenylate kinase, active site lid LDN97_RS13725 PF00183 Hsp90 protein LDN97_RS13725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS13730 PF02132 RecR protein LDN97_RS13730 PF13662 Toprim domain LDN97_RS13735 PF07503 HypF finger LDN97_RS13735 PF00708 Acylphosphatase LDN97_RS13735 PF17788 HypF Kae1-like domain LDN97_RS13735 PF01300 Telomere recombination LDN97_RS13740 PF01455 HupF/HypC family LDN97_RS13745 PF01924 Hydrogenase formation hypA family LDN97_RS13750 PF00586 AIR synthase related protein, N-terminal domain LDN97_RS13750 PF02769 AIR synthase related protein, C-terminal domain LDN97_RS13755 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LDN97_RS13765 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDN97_RS13770 PF08402 TOBE domain LDN97_RS13770 PF00005 ABC transporter LDN97_RS13775 PF00005 ABC transporter LDN97_RS13780 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS13780 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS13785 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS13790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS13795 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LDN97_RS13805 PF00374 Nickel-dependent hydrogenase LDN97_RS13810 PF03916 Polysulphide reductase, NrfD LDN97_RS13815 PF13247 4Fe-4S dicluster domain LDN97_RS13820 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LDN97_RS13820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDN97_RS13825 PF01168 Alanine racemase, N-terminal domain LDN97_RS13825 PF00842 Alanine racemase, C-terminal domain LDN97_RS13860 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS13860 PF00589 Phage integrase family LDN97_RS13875 PF01740 STAS domain LDN97_RS13875 PF00916 Sulfate permease family LDN97_RS13895 PF14403 Circularly permuted ATP-grasp type 2 LDN97_RS13900 PF14403 Circularly permuted ATP-grasp type 2 LDN97_RS13900 PF04168 A predicted alpha-helical domain with a conserved ER motif. LDN97_RS13930 PF03239 Iron permease FTR1 family LDN97_RS13935 PF01593 Flavin containing amine oxidoreductase LDN97_RS13955 PF07690 Major Facilitator Superfamily LDN97_RS13965 PF03600 Citrate transporter LDN97_RS13975 PF00005 ABC transporter LDN97_RS13980 PF02687 FtsX-like permease family LDN97_RS13980 PF12704 MacB-like periplasmic core domain LDN97_RS14005 PF01565 FAD binding domain LDN97_RS14005 PF02913 FAD linked oxidases, C-terminal domain LDN97_RS14010 PF02589 LUD domain LDN97_RS14015 PF02589 LUD domain LDN97_RS14015 PF11870 Domain of unknown function (DUF3390) LDN97_RS14015 PF13183 4Fe-4S dicluster domain LDN97_RS14020 PF02754 Cysteine-rich domain LDN97_RS14025 PF02652 L-lactate permease LDN97_RS14030 PF03466 LysR substrate binding domain LDN97_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS14055 PF01625 Peptide methionine sulfoxide reductase LDN97_RS14060 PF00583 Acetyltransferase (GNAT) family LDN97_RS14060 PF00696 Amino acid kinase family LDN97_RS14065 PF01842 ACT domain LDN97_RS14065 PF00696 Amino acid kinase family LDN97_RS14075 PF00884 Sulfatase LDN97_RS14080 PF01906 Putative heavy-metal-binding LDN97_RS14095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS14100 PF05728 Uncharacterised protein family (UPF0227) LDN97_RS14105 PF01432 Peptidase family M3 LDN97_RS14105 PF08439 Oligopeptidase F LDN97_RS14110 PF01432 Peptidase family M3 LDN97_RS14110 PF08439 Oligopeptidase F LDN97_RS14115 PF05661 Protein of unknown function (DUF808) LDN97_RS14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS14125 PF08447 PAS fold LDN97_RS14125 PF13426 PAS domain LDN97_RS14130 PF07549 SecD/SecF GG Motif LDN97_RS14130 PF02355 Protein export membrane protein LDN97_RS14135 PF13721 SecD export protein N-terminal TM region LDN97_RS14135 PF02355 Protein export membrane protein LDN97_RS14135 PF07549 SecD/SecF GG Motif LDN97_RS14170 PF01230 HIT domain LDN97_RS14175 PF00672 HAMP domain LDN97_RS14175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS14185 PF01979 Amidohydrolase family LDN97_RS14205 PF00375 Sodium:dicarboxylate symporter family LDN97_RS14215 PF00842 Alanine racemase, C-terminal domain LDN97_RS14215 PF01168 Alanine racemase, N-terminal domain LDN97_RS14220 PF03741 Integral membrane protein TerC family LDN97_RS14225 PF00005 ABC transporter LDN97_RS14225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS14230 PF00005 ABC transporter LDN97_RS14230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14235 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS14250 PF01914 MarC family integral membrane protein LDN97_RS14255 PF00465 Iron-containing alcohol dehydrogenase LDN97_RS14255 PF00171 Aldehyde dehydrogenase family LDN97_RS14260 PF00072 Response regulator receiver domain LDN97_RS14265 PF06580 Histidine kinase LDN97_RS14265 PF07694 5TMR of 5TMR-LYT LDN97_RS14270 PF04397 LytTr DNA-binding domain LDN97_RS14270 PF00072 Response regulator receiver domain LDN97_RS14275 PF02554 Carbon starvation protein CstA LDN97_RS14280 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDN97_RS14280 PF00924 Mechanosensitive ion channel LDN97_RS14280 PF12795 Mechanosensitive ion channel porin domain LDN97_RS14285 PF11742 Protein of unknown function (DUF3302) LDN97_RS14290 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS14290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS14295 PF00271 Helicase conserved C-terminal domain LDN97_RS14295 PF04851 Type III restriction enzyme, res subunit LDN97_RS14300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LDN97_RS14305 PF00462 Glutaredoxin LDN97_RS14315 PF00155 Aminotransferase class I and II LDN97_RS14320 PF03606 C4-dicarboxylate anaerobic carrier LDN97_RS14325 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LDN97_RS14325 PF07055 Enoyl reductase FAD binding domain LDN97_RS14325 PF12241 Trans-2-enoyl-CoA reductase catalytic region LDN97_RS14340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS14340 PF08447 PAS fold LDN97_RS14340 PF13426 PAS domain LDN97_RS14350 PF00892 EamA-like transporter family LDN97_RS14355 PF02508 Rnf-Nqr subunit, membrane protein LDN97_RS14360 PF04060 Putative Fe-S cluster LDN97_RS14365 PF12838 4Fe-4S dicluster domain LDN97_RS14365 PF10531 SLBB domain LDN97_RS14365 PF13375 RnfC Barrel sandwich hybrid domain LDN97_RS14365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDN97_RS14370 PF03116 NQR2, RnfD, RnfE family LDN97_RS14375 PF04205 FMN-binding domain LDN97_RS14380 PF02508 Rnf-Nqr subunit, membrane protein LDN97_RS14385 PF10576 Iron-sulfur binding domain of endonuclease III LDN97_RS14385 PF00633 Helix-hairpin-helix motif LDN97_RS14385 PF00730 HhH-GPD superfamily base excision DNA repair protein LDN97_RS14390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS14395 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS14395 PF00672 HAMP domain LDN97_RS14395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS14400 PF02535 ZIP Zinc transporter LDN97_RS14410 PF01048 Phosphorylase superfamily LDN97_RS14420 PF01497 Periplasmic binding protein LDN97_RS14425 PF02719 Polysaccharide biosynthesis protein LDN97_RS14430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDN97_RS14440 PF08666 SAF domain LDN97_RS14440 PF03102 NeuB family LDN97_RS14445 PF02350 UDP-N-acetylglucosamine 2-epimerase LDN97_RS14455 PF08241 Methyltransferase domain LDN97_RS14460 PF00483 Nucleotidyl transferase LDN97_RS14465 PF02348 Cytidylyltransferase LDN97_RS14480 PF02561 Flagellar protein FliS LDN97_RS14485 PF07196 Flagellin hook IN motif LDN97_RS14485 PF07195 Flagellar hook-associated protein 2 C-terminus LDN97_RS14485 PF02465 Flagellar hook-associated protein 2 N-terminus LDN97_RS14495 PF00700 Bacterial flagellin C-terminal helical region LDN97_RS14495 PF07196 Flagellin hook IN motif LDN97_RS14495 PF00669 Bacterial flagellin N-terminal helical region LDN97_RS14510 PF07196 Flagellin hook IN motif LDN97_RS14510 PF00669 Bacterial flagellin N-terminal helical region LDN97_RS14510 PF00669 Bacterial flagellin N-terminal helical region LDN97_RS14510 PF07196 Flagellin hook IN motif LDN97_RS14510 PF00700 Bacterial flagellin C-terminal helical region LDN97_RS14510 PF00700 Bacterial flagellin C-terminal helical region LDN97_RS14515 PF03458 UPF0126 domain LDN97_RS14525 PF02926 THUMP domain LDN97_RS14525 PF02568 Thiamine biosynthesis protein (ThiI) LDN97_RS14535 PF06832 Penicillin-Binding Protein C-terminus Family LDN97_RS14535 PF00912 Transglycosylase LDN97_RS14535 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS14540 PF07678 A-macroglobulin TED domain LDN97_RS14540 PF01835 MG2 domain LDN97_RS14540 PF17962 Bacterial macroglobulin domain 6 LDN97_RS14540 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LDN97_RS14540 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LDN97_RS14540 PF00207 Alpha-2-macroglobulin family LDN97_RS14540 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LDN97_RS14540 PF07703 Alpha-2-macroglobulin bait region domain LDN97_RS14540 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LDN97_RS14545 PF01594 AI-2E family transporter LDN97_RS14550 PF02321 Outer membrane efflux protein LDN97_RS14555 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS14555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS14570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS14570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDN97_RS14575 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS14575 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS14575 PF00563 EAL domain LDN97_RS14580 PF04055 Radical SAM superfamily LDN97_RS14590 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14595 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14600 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS14605 PF00005 ABC transporter LDN97_RS14610 PF03956 Lysine exporter LysO LDN97_RS14615 PF01979 Amidohydrolase family LDN97_RS14620 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS14630 PF04336 Acyl carrier protein phosphodiesterase LDN97_RS14645 PF03960 ArsC family LDN97_RS14650 PF00578 AhpC/TSA family LDN97_RS14655 PF01435 Peptidase family M48 LDN97_RS14655 PF13181 Tetratricopeptide repeat LDN97_RS14660 PF01206 Sulfurtransferase TusA LDN97_RS14665 PF01594 AI-2E family transporter LDN97_RS14675 PF00561 alpha/beta hydrolase fold LDN97_RS14680 PF03976 Polyphosphate kinase 2 (PPK2) LDN97_RS14685 PF08402 TOBE domain LDN97_RS14685 PF00005 ABC transporter LDN97_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14695 PF14785 Maltose transport system permease protein MalF P2 domain LDN97_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS14700 PF01547 Bacterial extracellular solute-binding protein LDN97_RS14705 PF04245 37-kD nucleoid-associated bacterial protein LDN97_RS14710 PF07208 Protein of unknown function (DUF1414) LDN97_RS14715 PF00884 Sulfatase LDN97_RS14715 PF11893 Domain of unknown function (DUF3413) LDN97_RS14720 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS14720 PF00593 TonB dependent receptor LDN97_RS14725 PF00326 Prolyl oligopeptidase family LDN97_RS14725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LDN97_RS14745 PF03974 Ecotin LDN97_RS14750 PF04219 Protein of unknown function, DUF LDN97_RS14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS14755 PF03466 LysR substrate binding domain LDN97_RS14760 PF01817 Chorismate mutase type II LDN97_RS14760 PF02153 Prephenate dehydrogenase LDN97_RS14765 PF00793 DAHP synthetase I family LDN97_RS14770 PF03009 Glycerophosphoryl diester phosphodiesterase family LDN97_RS14775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LDN97_RS14775 PF01266 FAD dependent oxidoreductase LDN97_RS14780 PF00455 DeoR C terminal sensor domain LDN97_RS14780 PF08220 DeoR-like helix-turn-helix domain LDN97_RS14785 PF07690 Major Facilitator Superfamily LDN97_RS14790 PF00230 Major intrinsic protein LDN97_RS14795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDN97_RS14795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDN97_RS14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS14800 PF03466 LysR substrate binding domain LDN97_RS14820 PF00248 Aldo/keto reductase family LDN97_RS14825 PF07690 Major Facilitator Superfamily LDN97_RS14835 PF02322 Cytochrome bd terminal oxidase subunit II LDN97_RS14840 PF01654 Cytochrome bd terminal oxidase subunit I LDN97_RS14845 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS14845 PF00155 Aminotransferase class I and II LDN97_RS14855 PF04391 Protein of unknown function (DUF533) LDN97_RS14865 PF10689 Protein of unknown function (DUF2496) LDN97_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS14875 PF03466 LysR substrate binding domain LDN97_RS14885 PF07690 Major Facilitator Superfamily LDN97_RS14890 PF01479 S4 domain LDN97_RS14890 PF00849 RNA pseudouridylate synthase LDN97_RS14895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LDN97_RS14895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LDN97_RS14915 PF04851 Type III restriction enzyme, res subunit LDN97_RS14915 PF00271 Helicase conserved C-terminal domain LDN97_RS14920 PF00300 Histidine phosphatase superfamily (branch 1) LDN97_RS14925 PF00563 EAL domain LDN97_RS14925 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS14925 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS14940 PF17810 Arginine decarboxylase helical bundle domain LDN97_RS14940 PF17944 Arginine decarboxylase C-terminal helical extension LDN97_RS14940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDN97_RS14945 PF07687 Peptidase dimerisation domain LDN97_RS14945 PF01546 Peptidase family M20/M25/M40 LDN97_RS14960 PF05221 S-adenosyl-L-homocysteine hydrolase LDN97_RS14960 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LDN97_RS14970 PF04264 YceI-like domain LDN97_RS14975 PF03466 LysR substrate binding domain LDN97_RS14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS14985 PF01268 Formate--tetrahydrofolate ligase LDN97_RS14990 PF17200 Single Cache domain 2 LDN97_RS14990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS14990 PF00672 HAMP domain LDN97_RS14995 PF01227 GTP cyclohydrolase I LDN97_RS15000 PF03453 MoeA N-terminal region (domain I and II) LDN97_RS15000 PF03454 MoeA C-terminal region (domain IV) LDN97_RS15000 PF00994 Probable molybdopterin binding domain LDN97_RS15005 PF00899 ThiF family LDN97_RS15010 PF12697 Alpha/beta hydrolase family LDN97_RS15015 PF03459 TOBE domain LDN97_RS15015 PF00005 ABC transporter LDN97_RS15020 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS15030 PF02391 MoaE protein LDN97_RS15035 PF02597 ThiS family LDN97_RS15040 PF01967 MoaC family LDN97_RS15045 PF00994 Probable molybdopterin binding domain LDN97_RS15050 PF03264 NapC/NirT cytochrome c family, N-terminal region LDN97_RS15055 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LDN97_RS15060 PF13237 4Fe-4S dicluster domain LDN97_RS15060 PF12801 4Fe-4S binding domain LDN97_RS15065 PF12838 4Fe-4S dicluster domain LDN97_RS15065 PF12800 4Fe-4S binding domain LDN97_RS15070 PF10518 TAT (twin-arginine translocation) pathway signal sequence LDN97_RS15070 PF01568 Molydopterin dinucleotide binding domain LDN97_RS15070 PF00384 Molybdopterin oxidoreductase LDN97_RS15070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDN97_RS15080 PF13187 4Fe-4S dicluster domain LDN97_RS15080 PF00037 4Fe-4S binding domain LDN97_RS15080 PF12800 4Fe-4S binding domain LDN97_RS15085 PF06463 Molybdenum Cofactor Synthesis C LDN97_RS15085 PF04055 Radical SAM superfamily LDN97_RS15090 PF07730 Histidine kinase LDN97_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS15090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LDN97_RS15090 PF00672 HAMP domain LDN97_RS15095 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS15095 PF00072 Response regulator receiver domain LDN97_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS15110 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS15110 PF09456 RcsC Alpha-Beta-Loop (ABL) LDN97_RS15110 PF00072 Response regulator receiver domain LDN97_RS15120 PF01933 Uncharacterised protein family UPF0052 LDN97_RS15130 PF13230 Glutamine amidotransferases class-II LDN97_RS15135 PF13580 SIS domain LDN97_RS15140 PF09317 Domain of unknown function (DUF1974) LDN97_RS15140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDN97_RS15140 PF02770 Acyl-CoA dehydrogenase, middle domain LDN97_RS15140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDN97_RS15145 PF11849 Domain of unknown function (DUF3369) LDN97_RS15155 PF00929 Exonuclease LDN97_RS15160 PF00075 RNase H LDN97_RS15165 PF08241 Methyltransferase domain LDN97_RS15170 PF00753 Metallo-beta-lactamase superfamily LDN97_RS15170 PF16123 Hydroxyacylglutathione hydrolase C-terminus LDN97_RS15180 PF01464 Transglycosylase SLT domain LDN97_RS15180 PF01476 LysM domain LDN97_RS15185 PF03372 Endonuclease/Exonuclease/phosphatase family LDN97_RS15195 PF03061 Thioesterase superfamily LDN97_RS15205 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS15210 PF01464 Transglycosylase SLT domain LDN97_RS15210 PF14718 Soluble lytic murein transglycosylase L domain LDN97_RS15215 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS15215 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS15215 PF00563 EAL domain LDN97_RS15220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDN97_RS15240 PF04357 TamB, inner membrane protein subunit of TAM complex LDN97_RS15245 PF17243 POTRA domain TamA domain 1 LDN97_RS15245 PF07244 Surface antigen variable number repeat LDN97_RS15245 PF01103 Surface antigen LDN97_RS15265 PF02627 Carboxymuconolactone decarboxylase family LDN97_RS15270 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS15270 PF00403 Heavy-metal-associated domain LDN97_RS15270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDN97_RS15275 PF13416 Bacterial extracellular solute-binding protein LDN97_RS15285 PF00005 ABC transporter LDN97_RS15290 PF01066 CDP-alcohol phosphatidyltransferase LDN97_RS15295 PF13406 Transglycosylase SLT domain LDN97_RS15300 PF01047 MarR family LDN97_RS15310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDN97_RS15310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDN97_RS15310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDN97_RS15310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDN97_RS15315 PF03925 SeqA protein C-terminal domain LDN97_RS15315 PF17206 SeqA protein N-terminal domain LDN97_RS15320 PF12697 Alpha/beta hydrolase family LDN97_RS15330 PF01402 Ribbon-helix-helix protein, copG family LDN97_RS15335 PF00258 Flavodoxin LDN97_RS15345 PF01475 Ferric uptake regulator family LDN97_RS15350 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LDN97_RS15350 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDN97_RS15355 PF03173 Putative carbohydrate binding domain LDN97_RS15355 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LDN97_RS15355 PF00728 Glycosyl hydrolase family 20, catalytic domain LDN97_RS15355 PF02838 Glycosyl hydrolase family 20, domain 2 LDN97_RS15360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDN97_RS15360 PF00367 phosphotransferase system, EIIB LDN97_RS15360 PF02378 Phosphotransferase system, EIIC LDN97_RS15365 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LDN97_RS15370 PF01979 Amidohydrolase family LDN97_RS15375 PF00480 ROK family LDN97_RS15375 PF01047 MarR family LDN97_RS15380 PF08019 Phosphoethanolamine transferase EptA/EptB LDN97_RS15380 PF00884 Sulfatase LDN97_RS15385 PF01709 Transcriptional regulator LDN97_RS15390 PF01336 OB-fold nucleic acid binding domain LDN97_RS15390 PF00152 tRNA synthetases class II (D, K and N) LDN97_RS15390 PF02938 GAD domain LDN97_RS15395 PF01904 Protein of unknown function DUF72 LDN97_RS15400 PF13649 Methyltransferase domain LDN97_RS15405 PF08003 Protein of unknown function (DUF1698) LDN97_RS15425 PF03466 LysR substrate binding domain LDN97_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS15430 PF00877 NlpC/P60 family LDN97_RS15440 PF00171 Aldehyde dehydrogenase family LDN97_RS15445 PF08359 YsiA-like protein, C-terminal region LDN97_RS15445 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS15455 PF00465 Iron-containing alcohol dehydrogenase LDN97_RS15460 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS15480 PF01554 MatE LDN97_RS15490 PF04325 Protein of unknown function (DUF465) LDN97_RS15495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LDN97_RS15495 PF10371 Domain of unknown function LDN97_RS15495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LDN97_RS15495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LDN97_RS15495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDN97_RS15500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDN97_RS15500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDN97_RS15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS15505 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS15505 PF03476 MOSC N-terminal beta barrel domain LDN97_RS15505 PF03473 MOSC domain LDN97_RS15505 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS15505 PF03476 MOSC N-terminal beta barrel domain LDN97_RS15505 PF03473 MOSC domain LDN97_RS15510 PF01435 Peptidase family M48 LDN97_RS15520 PF08241 Methyltransferase domain LDN97_RS15520 PF12697 Alpha/beta hydrolase family LDN97_RS15525 PF00155 Aminotransferase class I and II LDN97_RS15530 PF06968 Biotin and Thiamin Synthesis associated domain LDN97_RS15530 PF04055 Radical SAM superfamily LDN97_RS15535 PF00202 Aminotransferase class-III LDN97_RS15550 PF00152 tRNA synthetases class II (D, K and N) LDN97_RS15550 PF01336 OB-fold nucleic acid binding domain LDN97_RS15555 PF03605 Anaerobic c4-dicarboxylate membrane transporter LDN97_RS15565 PF07687 Peptidase dimerisation domain LDN97_RS15565 PF01546 Peptidase family M20/M25/M40 LDN97_RS15570 PF03606 C4-dicarboxylate anaerobic carrier LDN97_RS15585 PF02796 Helix-turn-helix domain of resolvase LDN97_RS15585 PF00239 Resolvase, N terminal domain LDN97_RS15600 PF13408 Recombinase zinc beta ribbon domain LDN97_RS15600 PF00239 Resolvase, N terminal domain LDN97_RS15600 PF07508 Recombinase LDN97_RS15605 PF03960 ArsC family LDN97_RS15610 PF01546 Peptidase family M20/M25/M40 LDN97_RS15610 PF07687 Peptidase dimerisation domain LDN97_RS15615 PF02557 D-alanyl-D-alanine carboxypeptidase LDN97_RS15625 PF02080 TrkA-C domain LDN97_RS15625 PF00999 Sodium/hydrogen exchanger family LDN97_RS15625 PF03471 Transporter associated domain LDN97_RS15635 PF01810 LysE type translocator LDN97_RS15640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS15640 PF00672 HAMP domain LDN97_RS15645 PF07509 Protein of unknown function (DUF1523) LDN97_RS15665 PF01156 Inosine-uridine preferring nucleoside hydrolase LDN97_RS15670 PF00849 RNA pseudouridylate synthase LDN97_RS15675 PF01048 Phosphorylase superfamily LDN97_RS15680 PF00465 Iron-containing alcohol dehydrogenase LDN97_RS15685 PF04355 SmpA / OmlA family LDN97_RS15690 PF13460 NAD(P)H-binding LDN97_RS15695 PF03658 RnfH family Ubiquitin LDN97_RS15700 PF03364 Polyketide cyclase / dehydrase and lipid transport LDN97_RS15705 PF01668 SmpB protein LDN97_RS15725 PF13508 Acetyltransferase (GNAT) domain LDN97_RS15745 PF01546 Peptidase family M20/M25/M40 LDN97_RS15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS15750 PF03466 LysR substrate binding domain LDN97_RS15755 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LDN97_RS15755 PF01243 Pyridoxamine 5'-phosphate oxidase LDN97_RS15770 PF01189 16S rRNA methyltransferase RsmB/F LDN97_RS15770 PF01029 NusB family LDN97_RS15775 PF00462 Glutaredoxin LDN97_RS15780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDN97_RS15780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDN97_RS15785 PF04333 MlaA lipoprotein LDN97_RS15795 PF03918 Cytochrome C biogenesis protein LDN97_RS15800 PF08534 Redoxin LDN97_RS15805 PF01578 Cytochrome C assembly protein LDN97_RS15805 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LDN97_RS15810 PF03100 CcmE LDN97_RS15815 PF04995 Heme exporter protein D (CcmD) LDN97_RS15820 PF01578 Cytochrome C assembly protein LDN97_RS15825 PF03379 CcmB protein LDN97_RS15830 PF00005 ABC transporter LDN97_RS15840 PF01584 CheW-like domain LDN97_RS15850 PF13614 AAA domain LDN97_RS15855 PF13677 Membrane MotB of proton-channel complex MotA/MotB LDN97_RS15855 PF00691 OmpA family LDN97_RS15860 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS15865 PF00072 Response regulator receiver domain LDN97_RS15865 PF01339 CheB methylesterase LDN97_RS15870 PF01584 CheW-like domain LDN97_RS15870 PF02895 Signal transducing histidine kinase, homodimeric domain LDN97_RS15870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS15870 PF00072 Response regulator receiver domain LDN97_RS15870 PF01627 Hpt domain LDN97_RS15875 PF04344 Chemotaxis phosphatase, CheZ LDN97_RS15880 PF00072 Response regulator receiver domain LDN97_RS15885 PF04542 Sigma-70 region 2 LDN97_RS15885 PF04539 Sigma-70 region 3 LDN97_RS15885 PF04545 Sigma-70, region 4 LDN97_RS15890 PF10609 NUBPL iron-transfer P-loop NTPase LDN97_RS15895 PF00448 SRP54-type protein, GTPase domain LDN97_RS15900 PF00771 FHIPEP family LDN97_RS15905 PF01312 FlhB HrpN YscU SpaS Family LDN97_RS15910 PF01311 Bacterial export proteins, family 1 LDN97_RS15915 PF01313 Bacterial export proteins, family 3 LDN97_RS15920 PF00813 FliP family LDN97_RS15925 PF04347 Flagellar biosynthesis protein, FliO LDN97_RS15930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDN97_RS15935 PF02154 Flagellar motor switch protein FliM LDN97_RS15935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDN97_RS15955 PF18269 T3SS EscN ATPase C-terminal domain LDN97_RS15955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDN97_RS15965 PF01706 FliG C-terminal domain LDN97_RS15965 PF14841 FliG middle domain LDN97_RS15965 PF14842 FliG N-terminal domain LDN97_RS15970 PF01514 Secretory protein of YscJ/FliF family LDN97_RS15970 PF08345 Flagellar M-ring protein C-terminal LDN97_RS15975 PF02049 Flagellar hook-basal body complex protein FliE LDN97_RS15990 PF03960 ArsC family LDN97_RS15995 PF01758 Sodium Bile acid symporter family LDN97_RS16000 PF01022 Bacterial regulatory protein, arsR family LDN97_RS16005 PF00072 Response regulator receiver domain LDN97_RS16010 PF00919 Uncharacterized protein family UPF0004 LDN97_RS16010 PF18693 TRAM domain LDN97_RS16010 PF04055 Radical SAM superfamily LDN97_RS16015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS16020 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS16025 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS16025 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS16030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS16030 PF00005 ABC transporter LDN97_RS16035 PF00005 ABC transporter LDN97_RS16035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS16045 PF01869 BadF/BadG/BcrA/BcrD ATPase family LDN97_RS16050 PF00728 Glycosyl hydrolase family 20, catalytic domain LDN97_RS16050 PF02838 Glycosyl hydrolase family 20, domain 2 LDN97_RS16055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS16055 PF08447 PAS fold LDN97_RS16070 PF01131 DNA topoisomerase LDN97_RS16070 PF01396 Topoisomerase DNA binding C4 zinc finger LDN97_RS16070 PF08272 Topoisomerase I zinc-ribbon-like LDN97_RS16070 PF01751 Toprim domain LDN97_RS16075 PF04996 Succinylarginine dihydrolase LDN97_RS16080 PF01343 Peptidase family S49 LDN97_RS16080 PF08496 Peptidase family S49 N-terminal LDN97_RS16085 PF00106 short chain dehydrogenase LDN97_RS16090 PF03466 LysR substrate binding domain LDN97_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16095 PF07690 Major Facilitator Superfamily LDN97_RS16100 PF00155 Aminotransferase class I and II LDN97_RS16110 PF03466 LysR substrate binding domain LDN97_RS16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16115 PF00709 Adenylosuccinate synthetase LDN97_RS16125 PF01161 Phosphatidylethanolamine-binding protein LDN97_RS16135 PF01204 Trehalase LDN97_RS16140 PF00579 tRNA synthetases class I (W and Y) LDN97_RS16145 PF01476 LysM domain LDN97_RS16145 PF08525 Opacity-associated protein A N-terminal motif LDN97_RS16145 PF01551 Peptidase family M23 LDN97_RS16150 PF03702 Anhydro-N-acetylmuramic acid kinase LDN97_RS16165 PF01042 Endoribonuclease L-PSP LDN97_RS16175 PF00456 Transketolase, thiamine diphosphate binding domain LDN97_RS16175 PF02779 Transketolase, pyrimidine binding domain LDN97_RS16175 PF02780 Transketolase, C-terminal domain LDN97_RS16180 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDN97_RS16180 PF02772 S-adenosylmethionine synthetase, central domain LDN97_RS16180 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDN97_RS16185 PF10263 SprT-like family LDN97_RS16185 PF17283 SprT-like zinc ribbon domain LDN97_RS16190 PF04231 Endonuclease I LDN97_RS16195 PF04452 RNA methyltransferase LDN97_RS16200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LDN97_RS16200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LDN97_RS16205 PF02622 Uncharacterized ACR, COG1678 LDN97_RS16210 PF03652 Holliday junction resolvase LDN97_RS16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16215 PF03466 LysR substrate binding domain LDN97_RS16220 PF07690 Major Facilitator Superfamily LDN97_RS16225 PF00144 Beta-lactamase LDN97_RS16230 PF01235 Sodium:alanine symporter family LDN97_RS16235 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDN97_RS16250 PF03167 Uracil DNA glycosylase superfamily LDN97_RS16255 PF01228 Glycine radical LDN97_RS16260 PF00375 Sodium:dicarboxylate symporter family LDN97_RS16265 PF00793 DAHP synthetase I family LDN97_RS16270 PF13369 Transglutaminase-like superfamily LDN97_RS16280 PF17827 PrmC N-terminal domain LDN97_RS16280 PF13847 Methyltransferase domain LDN97_RS16285 PF03462 PCRF domain LDN97_RS16285 PF00472 RF-1 domain LDN97_RS16290 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LDN97_RS16290 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LDN97_RS16290 PF01488 Shikimate / quinate 5-dehydrogenase LDN97_RS16295 PF03550 Outer membrane lipoprotein LolB LDN97_RS16300 PF08544 GHMP kinases C terminal LDN97_RS16300 PF00288 GHMP kinases N terminal domain LDN97_RS16310 PF14572 Phosphoribosyl synthetase-associated domain LDN97_RS16310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDN97_RS16315 PF01195 Peptidyl-tRNA hydrolase LDN97_RS16320 PF01926 50S ribosome-binding GTPase LDN97_RS16320 PF06071 Protein of unknown function (DUF933) LDN97_RS16365 PF02080 TrkA-C domain LDN97_RS16365 PF03600 Citrate transporter LDN97_RS16370 PF04266 ASCH domain LDN97_RS16375 PF07859 alpha/beta hydrolase fold LDN97_RS16385 PF07690 Major Facilitator Superfamily LDN97_RS16390 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS16405 PF00171 Aldehyde dehydrogenase family LDN97_RS16410 PF04958 Arginine N-succinyltransferase beta subunit LDN97_RS16415 PF00202 Aminotransferase class-III LDN97_RS16420 PF00117 Glutamine amidotransferase class-I LDN97_RS16430 PF00579 tRNA synthetases class I (W and Y) LDN97_RS16435 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS16440 PF00834 Ribulose-phosphate 3 epimerase family LDN97_RS16445 PF02086 D12 class N6 adenine-specific DNA methyltransferase LDN97_RS16450 PF05036 Sporulation related domain LDN97_RS16455 PF01761 3-dehydroquinate synthase LDN97_RS16460 PF01202 Shikimate kinase LDN97_RS16465 PF11741 AMIN domain LDN97_RS16465 PF00263 Bacterial type II and III secretion system protein LDN97_RS16465 PF03958 Bacterial type II/III secretion system short domain LDN97_RS16465 PF07660 Secretin and TonB N terminus short domain LDN97_RS16475 PF04350 Pilus assembly protein, PilO LDN97_RS16485 PF11104 Type IV pilus assembly protein PilM; LDN97_RS16490 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS16490 PF17092 Penicillin-binding protein OB-like domain LDN97_RS16490 PF00912 Transglycosylase LDN97_RS16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16495 PF03466 LysR substrate binding domain LDN97_RS16510 PF03466 LysR substrate binding domain LDN97_RS16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16525 PF02753 Pili assembly chaperone PapD, C-terminal domain LDN97_RS16525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDN97_RS16530 PF13953 PapC C-terminal domain LDN97_RS16530 PF13954 PapC N-terminal domain LDN97_RS16530 PF00577 Outer membrane usher protein LDN97_RS16535 PF02753 Pili assembly chaperone PapD, C-terminal domain LDN97_RS16535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDN97_RS16540 PF00419 Fimbrial protein LDN97_RS16545 PF01476 LysM domain LDN97_RS16545 PF08525 Opacity-associated protein A N-terminal motif LDN97_RS16545 PF01551 Peptidase family M23 LDN97_RS16555 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDN97_RS16555 PF00924 Mechanosensitive ion channel LDN97_RS16555 PF12795 Mechanosensitive ion channel porin domain LDN97_RS16560 PF03009 Glycerophosphoryl diester phosphodiesterase family LDN97_RS16565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS16565 PF00672 HAMP domain LDN97_RS16565 PF02743 Cache domain LDN97_RS16570 PF00890 FAD binding domain LDN97_RS16570 PF02910 Fumarate reductase flavoprotein C-term LDN97_RS16575 PF13085 2Fe-2S iron-sulfur cluster binding domain LDN97_RS16575 PF13183 4Fe-4S dicluster domain LDN97_RS16580 PF02300 Fumarate reductase subunit C LDN97_RS16585 PF02313 Fumarate reductase subunit D LDN97_RS16600 PF06224 Winged helix DNA-binding domain LDN97_RS16605 PF13847 Methyltransferase domain LDN97_RS16615 PF00501 AMP-binding enzyme LDN97_RS16625 PF00106 short chain dehydrogenase LDN97_RS16635 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS16635 PF00072 Response regulator receiver domain LDN97_RS16640 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS16640 PF08521 Two-component sensor kinase N-terminal LDN97_RS16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS16645 PF08443 RimK-like ATP-grasp domain LDN97_RS16645 PF18030 RimK PreATP-grasp domain LDN97_RS16650 PF00478 IMP dehydrogenase / GMP reductase domain LDN97_RS16660 PF01132 Elongation factor P (EF-P) OB domain LDN97_RS16660 PF08207 Elongation factor P (EF-P) KOW-like domain LDN97_RS16660 PF09285 Elongation factor P, C-terminal LDN97_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS16675 PF03180 NLPA lipoprotein LDN97_RS16680 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LDN97_RS16680 PF03171 2OG-Fe(II) oxygenase superfamily LDN97_RS16690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDN97_RS16690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDN97_RS16700 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS16700 PF17152 Periplasmic sensor domain LDN97_RS16710 PF17151 Periplasmic sensor domain LDN97_RS16710 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS16715 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS16725 PF03466 LysR substrate binding domain LDN97_RS16730 PF00857 Isochorismatase family LDN97_RS16735 PF01494 FAD binding domain LDN97_RS16740 PF00919 Uncharacterized protein family UPF0004 LDN97_RS16740 PF04055 Radical SAM superfamily LDN97_RS16740 PF01938 TRAM domain LDN97_RS16745 PF02562 PhoH-like protein LDN97_RS16750 PF02130 Uncharacterized protein family UPF0054 LDN97_RS16755 PF03471 Transporter associated domain LDN97_RS16755 PF00571 CBS domain LDN97_RS16760 PF00795 Carbon-nitrogen hydrolase LDN97_RS16765 PF07295 Zinc-ribbon containing domain LDN97_RS16770 PF08264 Anticodon-binding domain of tRNA LDN97_RS16770 PF13603 Leucyl-tRNA synthetase, Domain 2 LDN97_RS16770 PF00133 tRNA synthetases class I (I, L, M and V) LDN97_RS16785 PF01467 Cytidylyltransferase-like LDN97_RS16795 PF02590 Predicted SPOUT methyltransferase LDN97_RS16800 PF03717 Penicillin-binding Protein dimerisation domain LDN97_RS16800 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS16805 PF01098 Cell cycle protein LDN97_RS16810 PF13406 Transglycosylase SLT domain LDN97_RS16815 PF03330 Lytic transglycolase LDN97_RS16815 PF05036 Sporulation related domain LDN97_RS16820 PF07943 Penicillin-binding protein 5, C-terminal domain LDN97_RS16820 PF00768 D-alanyl-D-alanine carboxypeptidase LDN97_RS16825 PF04359 Protein of unknown function (DUF493) LDN97_RS16830 PF03099 Biotin/lipoate A/B protein ligase family LDN97_RS16835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LDN97_RS16835 PF04055 Radical SAM superfamily LDN97_RS16845 PF02508 Rnf-Nqr subunit, membrane protein LDN97_RS16860 PF13411 MerR HTH family regulatory protein LDN97_RS16865 PF01368 DHH family LDN97_RS16865 PF02272 DHHA1 domain LDN97_RS16865 PF17768 RecJ OB domain LDN97_RS16875 PF01741 Large-conductance mechanosensitive channel, MscL LDN97_RS16880 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS16880 PF00589 Phage integrase family LDN97_RS16885 PF00258 Flavodoxin LDN97_RS16890 PF01523 Putative modulator of DNA gyrase LDN97_RS16900 PF01523 Putative modulator of DNA gyrase LDN97_RS16910 PF17969 L,D-transpeptidase C-terminal domain LDN97_RS16910 PF03734 L,D-transpeptidase catalytic domain LDN97_RS16915 PF01136 Peptidase family U32 LDN97_RS16915 PF16325 Peptidase family U32 C-terminal domain LDN97_RS16920 PF12838 4Fe-4S dicluster domain LDN97_RS16925 PF06476 Protein of unknown function (DUF1090) LDN97_RS16930 PF02635 DsrE/DsrF-like family LDN97_RS16935 PF07690 Major Facilitator Superfamily LDN97_RS16940 PF00575 S1 RNA binding domain LDN97_RS16940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LDN97_RS16940 PF00013 KH domain LDN97_RS16940 PF01138 3' exoribonuclease family, domain 1 LDN97_RS16940 PF03725 3' exoribonuclease family, domain 2 LDN97_RS16945 PF00312 Ribosomal protein S15 LDN97_RS16950 PF09157 Pseudouridine synthase II TruB, C-terminal LDN97_RS16950 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDN97_RS16950 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDN97_RS16955 PF02033 Ribosome-binding factor A LDN97_RS16960 PF04760 Translation initiation factor IF-2, N-terminal region LDN97_RS16960 PF11987 Translation-initiation factor 2 LDN97_RS16960 PF00009 Elongation factor Tu GTP binding domain LDN97_RS16960 PF08364 Bacterial translation initiation factor IF-2 associated region LDN97_RS16965 PF13184 NusA-like KH domain LDN97_RS16965 PF08529 NusA N-terminal domain LDN97_RS16965 PF00575 S1 RNA binding domain LDN97_RS16970 PF02576 RimP N-terminal domain LDN97_RS16970 PF17384 RimP C-terminal SH3 domain LDN97_RS16985 PF03840 Preprotein translocase SecG subunit LDN97_RS16990 PF00121 Triosephosphate isomerase LDN97_RS16995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDN97_RS16995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDN97_RS16995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDN97_RS16995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDN97_RS17000 PF00809 Pterin binding enzyme LDN97_RS17005 PF01434 Peptidase family M41 LDN97_RS17005 PF06480 FtsH Extracellular LDN97_RS17005 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS17005 PF17862 AAA+ lid domain LDN97_RS17010 PF01728 FtsJ-like methyltransferase LDN97_RS17015 PF01985 CRS1 / YhbY (CRM) domain LDN97_RS17025 PF01272 Transcription elongation factor, GreA/GreB, C-term LDN97_RS17025 PF03449 Transcription elongation factor, N-terminal LDN97_RS17030 PF13677 Membrane MotB of proton-channel complex MotA/MotB LDN97_RS17030 PF00691 OmpA family LDN97_RS17035 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS17040 PF02609 Exonuclease VII small subunit LDN97_RS17045 PF00348 Polyprenyl synthetase LDN97_RS17050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDN97_RS17050 PF02779 Transketolase, pyrimidine binding domain LDN97_RS17050 PF02780 Transketolase, C-terminal domain LDN97_RS17055 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17055 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS17060 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS17070 PF00005 ABC transporter LDN97_RS17070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS17075 PF04608 Phosphatidylglycerophosphatase A LDN97_RS17080 PF00586 AIR synthase related protein, N-terminal domain LDN97_RS17080 PF02769 AIR synthase related protein, C-terminal domain LDN97_RS17085 PF01029 NusB family LDN97_RS17090 PF00885 6,7-dimethyl-8-ribityllumazine synthase LDN97_RS17095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDN97_RS17095 PF00925 GTP cyclohydrolase II LDN97_RS17100 PF00677 Lumazine binding domain LDN97_RS17105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDN97_RS17105 PF01872 RibD C-terminal domain LDN97_RS17110 PF03477 ATP cone domain LDN97_RS17120 PF00464 Serine hydroxymethyltransferase LDN97_RS17130 PF02613 Nitrate reductase delta subunit LDN97_RS17140 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS17140 PF00563 EAL domain LDN97_RS17140 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS17145 PF16177 Acetyl-coenzyme A synthetase N-terminus LDN97_RS17145 PF00501 AMP-binding enzyme LDN97_RS17145 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS17150 PF01220 Dehydroquinase class II LDN97_RS17155 PF00364 Biotin-requiring enzyme LDN97_RS17160 PF02785 Biotin carboxylase C-terminal domain LDN97_RS17160 PF00289 Biotin carboxylase, N-terminal domain LDN97_RS17160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDN97_RS17165 PF06196 Protein of unknown function (DUF997) LDN97_RS17170 PF00474 Sodium:solute symporter family LDN97_RS17175 PF00367 phosphotransferase system, EIIB LDN97_RS17175 PF02378 Phosphotransferase system, EIIC LDN97_RS17175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDN97_RS17180 PF03466 LysR substrate binding domain LDN97_RS17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS17185 PF00107 Zinc-binding dehydrogenase LDN97_RS17185 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS17195 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS17195 PF12464 Maltose acetyltransferase LDN97_RS17210 PF00881 Nitroreductase family LDN97_RS17215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS17215 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS17220 PF01343 Peptidase family S49 LDN97_RS17235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDN97_RS17235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDN97_RS17240 PF07023 Protein of unknown function (DUF1315) LDN97_RS17245 PF00710 Asparaginase, N-terminal LDN97_RS17245 PF17763 Glutaminase/Asparaginase C-terminal domain LDN97_RS17250 PF03616 Sodium/glutamate symporter LDN97_RS17255 PF00672 HAMP domain LDN97_RS17255 PF02743 Cache domain LDN97_RS17255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS17265 PF01336 OB-fold nucleic acid binding domain LDN97_RS17265 PF00152 tRNA synthetases class II (D, K and N) LDN97_RS17270 PF02567 Phenazine biosynthesis-like protein LDN97_RS17275 PF00667 FAD binding domain LDN97_RS17275 PF00258 Flavodoxin LDN97_RS17275 PF00175 Oxidoreductase NAD-binding domain LDN97_RS17280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDN97_RS17280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDN97_RS17285 PF01507 Phosphoadenosine phosphosulfate reductase family LDN97_RS17290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDN97_RS17295 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17300 PF00005 ABC transporter LDN97_RS17300 PF00571 CBS domain LDN97_RS17305 PF00186 Dihydrofolate reductase LDN97_RS17310 PF12821 Threonine/Serine exporter, ThrE LDN97_RS17315 PF06738 Putative threonine/serine exporter LDN97_RS17325 PF00994 Probable molybdopterin binding domain LDN97_RS17340 PF00194 Eukaryotic-type carbonic anhydrase LDN97_RS17345 PF04227 Indigoidine synthase A like protein LDN97_RS17350 PF00294 pfkB family carbohydrate kinase LDN97_RS17355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDN97_RS17355 PF04324 BFD-like [2Fe-2S] binding domain LDN97_RS17355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDN97_RS17355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS17355 PF13806 Rieske-like [2Fe-2S] domain LDN97_RS17355 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDN97_RS17360 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDN97_RS17360 PF04324 BFD-like [2Fe-2S] binding domain LDN97_RS17360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDN97_RS17360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDN97_RS17360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS17360 PF13806 Rieske-like [2Fe-2S] domain LDN97_RS17365 PF00005 ABC transporter LDN97_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17375 PF00005 ABC transporter LDN97_RS17385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDN97_RS17385 PF14824 Sirohaem biosynthesis protein central LDN97_RS17385 PF10414 Sirohaem synthase dimerisation region LDN97_RS17390 PF01568 Molydopterin dinucleotide binding domain LDN97_RS17390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDN97_RS17390 PF04324 BFD-like [2Fe-2S] binding domain LDN97_RS17390 PF00384 Molybdopterin oxidoreductase LDN97_RS17405 PF00582 Universal stress protein family LDN97_RS17415 PF00171 Aldehyde dehydrogenase family LDN97_RS17420 PF00696 Amino acid kinase family LDN97_RS17420 PF01472 PUA domain LDN97_RS17425 PF07417 Sigma factor-binding transcriptional regulator Crl LDN97_RS17430 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LDN97_RS17435 PF00156 Phosphoribosyl transferase domain LDN97_RS17440 PF07687 Peptidase dimerisation domain LDN97_RS17440 PF01546 Peptidase family M20/M25/M40 LDN97_RS17445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS17445 PF00005 ABC transporter LDN97_RS17450 PF00005 ABC transporter LDN97_RS17450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDN97_RS17455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS17460 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17460 PF12911 N-terminal TM domain of oligopeptide transport permease C LDN97_RS17465 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS17470 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS17470 PF00593 TonB dependent receptor LDN97_RS17480 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS17485 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS17490 PF02472 Biopolymer transport protein ExbD/TolR LDN97_RS17505 PF00704 Glycosyl hydrolases family 18 LDN97_RS17505 PF06483 Chitinase C LDN97_RS17540 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDN97_RS17545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDN97_RS17550 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDN97_RS17555 PF00672 HAMP domain LDN97_RS17555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS17565 PF00313 'Cold-shock' DNA-binding domain LDN97_RS17595 PF00929 Exonuclease LDN97_RS17600 PF03193 RsgA GTPase LDN97_RS17605 PF02666 Phosphatidylserine decarboxylase LDN97_RS17610 PF09905 DNA-binding protein VF530 LDN97_RS17625 PF02627 Carboxymuconolactone decarboxylase family LDN97_RS17630 PF12833 Helix-turn-helix domain LDN97_RS17630 PF12852 Cupin LDN97_RS17640 PF00563 EAL domain LDN97_RS17640 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS17640 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS17645 PF06877 Regulator of ribonuclease activity B LDN97_RS17655 PF00563 EAL domain LDN97_RS17655 PF01590 GAF domain LDN97_RS17655 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS17655 PF00360 Phytochrome region LDN97_RS17660 PF01609 Transposase DDE domain LDN97_RS17660 PF05598 Transposase domain (DUF772) LDN97_RS17695 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS17695 PF00589 Phage integrase family LDN97_RS17705 PF13426 PAS domain LDN97_RS17705 PF08448 PAS fold LDN97_RS17705 PF08447 PAS fold LDN97_RS17705 PF05231 MASE1 LDN97_RS17705 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS17705 PF00563 EAL domain LDN97_RS17725 PF00589 Phage integrase family LDN97_RS17745 PF00561 alpha/beta hydrolase fold LDN97_RS17750 PF00005 ABC transporter LDN97_RS17750 PF00664 ABC transporter transmembrane region LDN97_RS17755 PF06004 Bacterial protein of unknown function (DUF903) LDN97_RS17760 PF00581 Rhodanese-like domain LDN97_RS17765 PF04960 Glutaminase LDN97_RS17770 PF04320 Protein with unknown function (DUF469) LDN97_RS17775 PF02390 Putative methyltransferase LDN97_RS17780 PF01483 Proprotein convertase P-domain LDN97_RS17780 PF04389 Peptidase family M28 LDN97_RS17785 PF00155 Aminotransferase class I and II LDN97_RS17790 PF00563 EAL domain LDN97_RS17790 PF12792 CSS motif domain associated with EAL LDN97_RS17795 PF01370 NAD dependent epimerase/dehydratase family LDN97_RS17795 PF08338 Domain of unknown function (DUF1731) LDN97_RS17805 PF00005 ABC transporter LDN97_RS17810 PF13472 GDSL-like Lipase/Acylhydrolase family LDN97_RS17815 PF01584 CheW-like domain LDN97_RS17815 PF00072 Response regulator receiver domain LDN97_RS17820 PF00267 Gram-negative porin LDN97_RS17825 PF00571 CBS domain LDN97_RS17825 PF00478 IMP dehydrogenase / GMP reductase domain LDN97_RS17830 PF00005 ABC transporter LDN97_RS17830 PF12848 ABC transporter LDN97_RS17840 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LDN97_RS17880 PF13411 MerR HTH family regulatory protein LDN97_RS17890 PF00474 Sodium:solute symporter family LDN97_RS17905 PF17969 L,D-transpeptidase C-terminal domain LDN97_RS17905 PF03734 L,D-transpeptidase catalytic domain LDN97_RS17910 PF00924 Mechanosensitive ion channel LDN97_RS17915 PF00871 Acetokinase family LDN97_RS17920 PF04074 YhcH/YjgK/YiaL LDN97_RS17930 PF13302 Acetyltransferase (GNAT) domain LDN97_RS17935 PF13302 Acetyltransferase (GNAT) domain LDN97_RS17940 PF04151 Bacterial pre-peptidase C-terminal domain LDN97_RS17940 PF07504 Fungalysin/Thermolysin Propeptide Motif LDN97_RS17940 PF03413 Peptidase propeptide and YPEB domain LDN97_RS17940 PF01447 Thermolysin metallopeptidase, catalytic domain LDN97_RS17940 PF02868 Thermolysin metallopeptidase, alpha-helical domain LDN97_RS17945 PF03466 LysR substrate binding domain LDN97_RS17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS17950 PF07690 Major Facilitator Superfamily LDN97_RS17970 PF02080 TrkA-C domain LDN97_RS17970 PF06826 Predicted Permease Membrane Region LDN97_RS17975 PF03006 Haemolysin-III related LDN97_RS17980 PF00282 Pyridoxal-dependent decarboxylase conserved domain LDN97_RS17985 PF04279 Intracellular septation protein A LDN97_RS17990 PF03795 YCII-related domain LDN97_RS17995 PF00459 Inositol monophosphatase family LDN97_RS18005 PF00483 Nucleotidyl transferase LDN97_RS18010 PF00854 POT family LDN97_RS18015 PF00072 Response regulator receiver domain LDN97_RS18045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS18055 PF01207 Dihydrouridine synthase (Dus) LDN97_RS18060 PF02954 Bacterial regulatory protein, Fis family LDN97_RS18090 PF01521 Iron-sulphur cluster biosynthesis LDN97_RS18100 PF00654 Voltage gated chloride channel LDN97_RS18105 PF00202 Aminotransferase class-III LDN97_RS18120 PF01569 PAP2 superfamily LDN97_RS18130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS18130 PF03466 LysR substrate binding domain LDN97_RS18135 PF00893 Small Multidrug Resistance protein LDN97_RS18140 PF00893 Small Multidrug Resistance protein LDN97_RS18145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS18150 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS18150 PF14814 Bifunctional transglycosylase second domain LDN97_RS18150 PF00912 Transglycosylase LDN97_RS18155 PF08482 ATP-dependent helicase C-terminal LDN97_RS18155 PF00271 Helicase conserved C-terminal domain LDN97_RS18155 PF04408 Helicase associated domain (HA2) LDN97_RS18155 PF00270 DEAD/DEAH box helicase LDN97_RS18165 PF17746 SfsA N-terminal OB domain LDN97_RS18165 PF03749 Sugar fermentation stimulation protein RE domain LDN97_RS18170 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDN97_RS18175 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDN97_RS18180 PF01743 Poly A polymerase head domain LDN97_RS18180 PF12626 Polymerase A arginine-rich C-terminus LDN97_RS18180 PF12627 Probable RNA and SrmB- binding site of polymerase A LDN97_RS18185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDN97_RS18190 PF02548 Ketopantoate hydroxymethyltransferase LDN97_RS18195 PF02569 Pantoate-beta-alanine ligase LDN97_RS18205 PF01061 ABC-2 type transporter LDN97_RS18210 PF00005 ABC transporter LDN97_RS18215 PF00156 Phosphoribosyl transferase domain LDN97_RS18220 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS18225 PF02441 Flavoprotein LDN97_RS18230 PF01225 Mur ligase family, catalytic domain LDN97_RS18230 PF02875 Mur ligase family, glutamate ligase domain LDN97_RS18230 PF08245 Mur ligase middle domain LDN97_RS18235 PF00719 Inorganic pyrophosphatase LDN97_RS18250 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LDN97_RS18265 PF00005 ABC transporter LDN97_RS18285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS18285 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS18285 PF00672 HAMP domain LDN97_RS18330 PF03600 Citrate transporter LDN97_RS18330 PF02080 TrkA-C domain LDN97_RS18335 PF00009 Elongation factor Tu GTP binding domain LDN97_RS18340 PF01507 Phosphoadenosine phosphosulfate reductase family LDN97_RS18345 PF10414 Sirohaem synthase dimerisation region LDN97_RS18345 PF14824 Sirohaem biosynthesis protein central LDN97_RS18345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDN97_RS18350 PF01145 SPFH domain / Band 7 family LDN97_RS18350 PF16200 C-terminal region of band_7 LDN97_RS18355 PF01957 NfeD-like C-terminal, partner-binding LDN97_RS18370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDN97_RS18370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDN97_RS18375 PF07690 Major Facilitator Superfamily LDN97_RS18380 PF01725 Ham1 family LDN97_RS18385 PF04055 Radical SAM superfamily LDN97_RS18385 PF06969 HemN C-terminal domain LDN97_RS18390 PF03889 Alternative ribosome-rescue factor A LDN97_RS18400 PF13411 MerR HTH family regulatory protein LDN97_RS18405 PF01808 AICARFT/IMPCHase bienzyme LDN97_RS18405 PF02142 MGS-like domain LDN97_RS18410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDN97_RS18410 PF02843 Phosphoribosylglycinamide synthetase, C domain LDN97_RS18410 PF02844 Phosphoribosylglycinamide synthetase, N domain LDN97_RS18425 PF00128 Alpha amylase, catalytic domain LDN97_RS18440 PF04546 Sigma-70, non-essential region LDN97_RS18440 PF03979 Sigma-70 factor, region 1.1 LDN97_RS18440 PF00140 Sigma-70 factor, region 1.2 LDN97_RS18440 PF04542 Sigma-70 region 2 LDN97_RS18440 PF04539 Sigma-70 region 3 LDN97_RS18440 PF04545 Sigma-70, region 4 LDN97_RS18445 PF08278 DNA primase DnaG DnaB-binding LDN97_RS18445 PF01807 CHC2 zinc finger LDN97_RS18445 PF10410 DnaB-helicase binding domain of primase LDN97_RS18445 PF08275 DNA primase catalytic core, N-terminal domain LDN97_RS18450 PF09424 Yqey-like protein LDN97_RS18455 PF01165 Ribosomal protein S21 LDN97_RS18460 PF00814 Glycoprotease family LDN97_RS18470 PF00140 Sigma-70 factor, region 1.2 LDN97_RS18470 PF04542 Sigma-70 region 2 LDN97_RS18470 PF04539 Sigma-70 region 3 LDN97_RS18470 PF04545 Sigma-70, region 4 LDN97_RS18475 PF01476 LysM domain LDN97_RS18475 PF01551 Peptidase family M23 LDN97_RS18480 PF09335 SNARE associated Golgi protein LDN97_RS18490 PF01975 Survival protein SurE LDN97_RS18495 PF01142 tRNA pseudouridine synthase D (TruD) LDN97_RS18500 PF02542 YgbB family LDN97_RS18505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LDN97_RS18510 PF04977 Septum formation initiator LDN97_RS18515 PF00113 Enolase, C-terminal TIM barrel domain LDN97_RS18515 PF03952 Enolase, N-terminal domain LDN97_RS18520 PF00117 Glutamine amidotransferase class-I LDN97_RS18520 PF06418 CTP synthase N-terminus LDN97_RS18525 PF03819 MazG nucleotide pyrophosphohydrolase domain LDN97_RS18530 PF13291 ACT domain LDN97_RS18530 PF02824 TGS domain LDN97_RS18530 PF04607 Region found in RelA / SpoT proteins LDN97_RS18535 PF01938 TRAM domain LDN97_RS18535 PF05958 tRNA (Uracil-5-)-methyltransferase LDN97_RS18540 PF01627 Hpt domain LDN97_RS18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS18540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDN97_RS18540 PF00072 Response regulator receiver domain LDN97_RS18540 PF00672 HAMP domain LDN97_RS18540 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS18545 PF07308 Protein of unknown function (DUF1456) LDN97_RS18550 PF01510 N-acetylmuramoyl-L-alanine amidase LDN97_RS18555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LDN97_RS18560 PF11967 Recombination protein O N terminal LDN97_RS18560 PF02565 Recombination protein O C terminal LDN97_RS18565 PF07650 KH domain LDN97_RS18565 PF01926 50S ribosome-binding GTPase LDN97_RS18570 PF14622 Ribonuclease-III-like LDN97_RS18570 PF00035 Double-stranded RNA binding motif LDN97_RS18575 PF10502 Signal peptidase, peptidase S26 LDN97_RS18580 PF00679 Elongation factor G C-terminus LDN97_RS18580 PF00009 Elongation factor Tu GTP binding domain LDN97_RS18580 PF03144 Elongation factor Tu domain 2 LDN97_RS18580 PF06421 GTP-binding protein LepA C-terminus LDN97_RS18590 PF03888 MucB/RseB N-terminal domain LDN97_RS18590 PF17188 MucB/RseB C-terminal domain LDN97_RS18595 PF03873 Anti sigma-E protein RseA, C-terminal domain LDN97_RS18595 PF03872 Anti sigma-E protein RseA, N-terminal domain LDN97_RS18600 PF04542 Sigma-70 region 2 LDN97_RS18600 PF08281 Sigma-70, region 4 LDN97_RS18605 PF00890 FAD binding domain LDN97_RS18605 PF02910 Fumarate reductase flavoprotein C-term LDN97_RS18615 PF03937 Flavinator of succinate dehydrogenase LDN97_RS18620 PF01571 Aminomethyltransferase folate-binding domain LDN97_RS18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS18625 PF03466 LysR substrate binding domain LDN97_RS18640 PF03091 CutA1 divalent ion tolerance protein LDN97_RS18645 PF02683 Cytochrome C biogenesis protein transmembrane region LDN97_RS18645 PF11412 Disulphide bond corrector protein DsbC LDN97_RS18655 PF01266 FAD dependent oxidoreductase LDN97_RS18660 PF01116 Fructose-bisphosphate aldolase class-II LDN97_RS18665 PF00162 Phosphoglycerate kinase LDN97_RS18670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDN97_RS18670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDN97_RS18675 PF00480 ROK family LDN97_RS18680 PF01208 Uroporphyrinogen decarboxylase (URO-D) LDN97_RS18685 PF00293 NUDIX domain LDN97_RS18685 PF09297 NADH pyrophosphatase zinc ribbon domain LDN97_RS18690 PF08239 Bacterial SH3 domain LDN97_RS18695 PF00027 Cyclic nucleotide-binding domain LDN97_RS18695 PF00520 Ion transport protein LDN97_RS18700 PF02743 Cache domain LDN97_RS18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS18700 PF00672 HAMP domain LDN97_RS18710 PF08335 GlnD PII-uridylyltransferase LDN97_RS18710 PF03710 Glutamate-ammonia ligase adenylyltransferase LDN97_RS18725 PF00326 Prolyl oligopeptidase family LDN97_RS18725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LDN97_RS18730 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS18735 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS18740 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS18745 PF00005 ABC transporter LDN97_RS18750 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS18755 PF13194 Domain of unknown function (DUF4010) LDN97_RS18760 PF14602 Hexapeptide repeat of succinyl-transferase LDN97_RS18760 PF12464 Maltose acetyltransferase LDN97_RS18790 PF14552 Tautomerase enzyme LDN97_RS18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS18795 PF03466 LysR substrate binding domain LDN97_RS18800 PF14698 Argininosuccinate lyase C-terminal LDN97_RS18800 PF00206 Lyase LDN97_RS18805 PF00764 Arginosuccinate synthase LDN97_RS18810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDN97_RS18810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDN97_RS18815 PF00696 Amino acid kinase family LDN97_RS18820 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDN97_RS18820 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDN97_RS18825 PF07687 Peptidase dimerisation domain LDN97_RS18825 PF01546 Peptidase family M20/M25/M40 LDN97_RS18830 PF00311 Phosphoenolpyruvate carboxylase LDN97_RS18835 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS18840 PF04073 Aminoacyl-tRNA editing domain LDN97_RS18860 PF00155 Aminotransferase class I and II LDN97_RS18860 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS18875 PF03466 LysR substrate binding domain LDN97_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS18880 PF03788 LrgA family LDN97_RS18885 PF04172 LrgB-like family LDN97_RS18890 PF03447 Homoserine dehydrogenase, NAD binding domain LDN97_RS18890 PF00742 Homoserine dehydrogenase LDN97_RS18890 PF00696 Amino acid kinase family LDN97_RS18895 PF01053 Cys/Met metabolism PLP-dependent enzyme LDN97_RS18900 PF01340 Met Apo-repressor, MetJ LDN97_RS18910 PF01588 Putative tRNA binding domain LDN97_RS18915 PF03222 Tryptophan/tyrosine permease family LDN97_RS18920 PF00459 Inositol monophosphatase family LDN97_RS18925 PF00293 NUDIX domain LDN97_RS18930 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS18935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDN97_RS18940 PF03466 LysR substrate binding domain LDN97_RS18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS18945 PF00579 tRNA synthetases class I (W and Y) LDN97_RS18945 PF01479 S4 domain LDN97_RS18950 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS18955 PF01203 Type II secretion system (T2SS), protein N LDN97_RS18960 PF04612 Type II secretion system (T2SS), protein M LDN97_RS18965 PF12693 GspL periplasmic domain LDN97_RS18965 PF05134 Type II secretion system (T2SS), protein L LDN97_RS18970 PF03934 Type II secretion system (T2SS), protein K LDN97_RS18990 PF11612 Type II secretion system (T2SS), protein J LDN97_RS18990 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS18995 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS18995 PF02501 Type II secretion system (T2SS), protein I LDN97_RS19000 PF12019 Type II transport protein GspH LDN97_RS19000 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS19005 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS19005 PF08334 Type II secretion system (T2SS), protein G LDN97_RS19010 PF00482 Type II secretion system (T2SS), protein F LDN97_RS19015 PF00437 Type II/IV secretion system protein LDN97_RS19020 PF00263 Bacterial type II and III secretion system protein LDN97_RS19020 PF03958 Bacterial type II/III secretion system short domain LDN97_RS19025 PF11356 Type II secretion system protein C LDN97_RS19030 PF01479 S4 domain LDN97_RS19035 PF01430 Hsp33 protein LDN97_RS19040 PF01293 Phosphoenolpyruvate carboxykinase LDN97_RS19045 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS19050 PF01321 Creatinase/Prolidase N-terminal domain LDN97_RS19050 PF00557 Metallopeptidase family M24 LDN97_RS19055 PF00583 Acetyltransferase (GNAT) family LDN97_RS19060 PF05433 Glycine zipper 2TM domain LDN97_RS19065 PF01928 CYTH domain LDN97_RS19070 PF01865 Protein of unknown function DUF47 LDN97_RS19075 PF01384 Phosphate transporter family LDN97_RS19080 PF01743 Poly A polymerase head domain LDN97_RS19080 PF01966 HD domain LDN97_RS19080 PF12627 Probable RNA and SrmB- binding site of polymerase A LDN97_RS19085 PF01471 Putative peptidoglycan binding domain LDN97_RS19085 PF13401 AAA domain LDN97_RS19090 PF16537 Type II secretion system protein B LDN97_RS19095 PF10576 Iron-sulfur binding domain of endonuclease III LDN97_RS19095 PF00633 Helix-hairpin-helix motif LDN97_RS19095 PF00730 HhH-GPD superfamily base excision DNA repair protein LDN97_RS19095 PF14815 NUDIX domain LDN97_RS19100 PF04362 Bacterial Fe(2+) trafficking LDN97_RS19105 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LDN97_RS19105 PF01464 Transglycosylase SLT domain LDN97_RS19115 PF00657 GDSL-like Lipase/Acylhydrolase LDN97_RS19120 PF00691 OmpA family LDN97_RS19120 PF01389 OmpA-like transmembrane domain LDN97_RS19125 PF03886 ABC-type transport auxiliary lipoprotein component LDN97_RS19130 PF02470 MlaD protein LDN97_RS19135 PF04403 Paraquat-inducible protein A LDN97_RS19140 PF17209 Hfq protein LDN97_RS19145 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS19150 PF00360 Phytochrome region LDN97_RS19150 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS19150 PF01590 GAF domain LDN97_RS19150 PF00563 EAL domain LDN97_RS19155 PF00701 Dihydrodipicolinate synthetase family LDN97_RS19160 PF05175 Methyltransferase small domain LDN97_RS19160 PF08468 Methyltransferase small domain N-terminal LDN97_RS19170 PF08323 Starch synthase catalytic domain LDN97_RS19170 PF00534 Glycosyl transferases group 1 LDN97_RS19205 PF03553 Na+/H+ antiporter family LDN97_RS19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS19210 PF03466 LysR substrate binding domain LDN97_RS19215 PF13416 Bacterial extracellular solute-binding protein LDN97_RS19220 PF08402 TOBE domain LDN97_RS19220 PF00005 ABC transporter LDN97_RS19225 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS19230 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS19235 PF00171 Aldehyde dehydrogenase family LDN97_RS19240 PF01040 UbiA prenyltransferase family LDN97_RS19265 PF00510 Cytochrome c oxidase subunit III LDN97_RS19270 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LDN97_RS19275 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDN97_RS19280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDN97_RS19280 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LDN97_RS19285 PF05127 Helicase LDN97_RS19285 PF17176 tRNA-binding domain LDN97_RS19285 PF13718 GNAT acetyltransferase 2 LDN97_RS19285 PF08351 Domain of unknown function (DUF1726) LDN97_RS19300 PF00210 Ferritin-like domain LDN97_RS19305 PF02142 MGS-like domain LDN97_RS19320 PF17763 Glutaminase/Asparaginase C-terminal domain LDN97_RS19320 PF00710 Asparaginase, N-terminal LDN97_RS19335 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS19340 PF00367 phosphotransferase system, EIIB LDN97_RS19340 PF02378 Phosphotransferase system, EIIC LDN97_RS19345 PF00128 Alpha amylase, catalytic domain LDN97_RS19345 PF11941 Domain of unknown function (DUF3459) LDN97_RS19350 PF14602 Hexapeptide repeat of succinyl-transferase LDN97_RS19350 PF12464 Maltose acetyltransferase LDN97_RS19355 PF01037 Lrp/AsnC ligand binding domain LDN97_RS19360 PF00892 EamA-like transporter family LDN97_RS19385 PF04222 Protein of unknown function (DUF416) LDN97_RS19390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDN97_RS19395 PF01551 Peptidase family M23 LDN97_RS19395 PF08525 Opacity-associated protein A N-terminal motif LDN97_RS19395 PF01476 LysM domain LDN97_RS19415 PF01297 Zinc-uptake complex component A periplasmic LDN97_RS19420 PF00005 ABC transporter LDN97_RS19425 PF00950 ABC 3 transport family LDN97_RS19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS19430 PF03466 LysR substrate binding domain LDN97_RS19440 PF03167 Uracil DNA glycosylase superfamily LDN97_RS19445 PF00892 EamA-like transporter family LDN97_RS19450 PF01541 GIY-YIG catalytic domain LDN97_RS19465 PF04012 PspA/IM30 family LDN97_RS19470 PF01553 Acyltransferase LDN97_RS19490 PF00578 AhpC/TSA family LDN97_RS19500 PF00226 DnaJ domain LDN97_RS19500 PF00684 DnaJ central domain LDN97_RS19500 PF01556 DnaJ C terminal domain LDN97_RS19545 PF03989 DNA gyrase C-terminal domain, beta-propeller LDN97_RS19545 PF00521 DNA gyrase/topoisomerase IV, subunit A LDN97_RS19550 PF00204 DNA gyrase B LDN97_RS19550 PF00986 DNA gyrase B subunit, carboxyl terminus LDN97_RS19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS19550 PF01751 Toprim domain LDN97_RS19555 PF04632 Fusaric acid resistance protein family LDN97_RS19560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS19560 PF00529 HlyD membrane-fusion protein of T1SS LDN97_RS19565 PF07869 Protein of unknown function (DUF1656) LDN97_RS19575 PF00293 NUDIX domain LDN97_RS19580 PF05728 Uncharacterised protein family (UPF0227) LDN97_RS19585 PF00149 Calcineurin-like phosphoesterase LDN97_RS19590 PF06853 Protein of unknown function (DUF1249) LDN97_RS19595 PF00293 NUDIX domain LDN97_RS19600 PF02321 Outer membrane efflux protein LDN97_RS19605 PF01467 Cytidylyltransferase-like LDN97_RS19605 PF00294 pfkB family carbohydrate kinase LDN97_RS19610 PF03279 Bacterial lipid A biosynthesis acyltransferase LDN97_RS19615 PF02872 5'-nucleotidase, C-terminal domain LDN97_RS19615 PF00149 Calcineurin-like phosphoesterase LDN97_RS19620 PF01810 LysE type translocator LDN97_RS19625 PF03472 Autoinducer binding domain LDN97_RS19625 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS19630 PF00765 Autoinducer synthase LDN97_RS19635 PF03466 LysR substrate binding domain LDN97_RS19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS19640 PF08206 Ribonuclease B OB domain LDN97_RS19640 PF00773 RNB domain LDN97_RS19640 PF17876 Cold shock domain LDN97_RS19645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDN97_RS19645 PF02378 Phosphotransferase system, EIIC LDN97_RS19645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDN97_RS19650 PF01232 Mannitol dehydrogenase Rossmann domain LDN97_RS19650 PF08125 Mannitol dehydrogenase C-terminal domain LDN97_RS19655 PF05068 Mannitol repressor LDN97_RS19660 PF02080 TrkA-C domain LDN97_RS19660 PF03471 Transporter associated domain LDN97_RS19660 PF00999 Sodium/hydrogen exchanger family LDN97_RS19675 PF01544 CorA-like Mg2+ transporter protein LDN97_RS19680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LDN97_RS19695 PF07670 Nucleoside recognition LDN97_RS19695 PF07662 Na+ dependent nucleoside transporter C-terminus LDN97_RS19695 PF01773 Na+ dependent nucleoside transporter N-terminus LDN97_RS19700 PF03880 DbpA RNA binding domain LDN97_RS19700 PF00270 DEAD/DEAH box helicase LDN97_RS19700 PF00271 Helicase conserved C-terminal domain LDN97_RS19720 PF01040 UbiA prenyltransferase family LDN97_RS19725 PF00425 chorismate binding enzyme LDN97_RS19730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDN97_RS19730 PF16582 Middle domain of thiamine pyrophosphate LDN97_RS19730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDN97_RS19735 PF12697 Alpha/beta hydrolase family LDN97_RS19740 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS19745 PF13378 Enolase C-terminal domain-like LDN97_RS19750 PF00501 AMP-binding enzyme LDN97_RS19750 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS19755 PF01752 Collagenase LDN97_RS19755 PF08453 Peptidase family M9 N-terminal LDN97_RS19760 PF02698 DUF218 domain LDN97_RS19765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDN97_RS19765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDN97_RS19775 PF00561 alpha/beta hydrolase fold LDN97_RS19795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDN97_RS19795 PF12793 Sugar transport-related sRNA regulator N-term LDN97_RS19805 PF01053 Cys/Met metabolism PLP-dependent enzyme LDN97_RS19815 PF00465 Iron-containing alcohol dehydrogenase LDN97_RS19830 PF00106 short chain dehydrogenase LDN97_RS19850 PF02308 MgtC family LDN97_RS19855 PF00128 Alpha amylase, catalytic domain LDN97_RS19855 PF02903 Alpha amylase, N-terminal ig-like domain LDN97_RS19855 PF16657 Maltogenic Amylase, C-terminal domain LDN97_RS19865 PF00884 Sulfatase LDN97_RS19870 PF01037 Lrp/AsnC ligand binding domain LDN97_RS19880 PF04204 Homoserine O-succinyltransferase LDN97_RS19890 PF00994 Probable molybdopterin binding domain LDN97_RS19890 PF02464 Competence-damaged protein LDN97_RS19895 PF04307 LexA-binding, inner membrane-associated putative hydrolase LDN97_RS19910 PF07722 Peptidase C26 LDN97_RS19920 PF13419 Haloacid dehalogenase-like hydrolase LDN97_RS19925 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS19925 PF00589 Phage integrase family LDN97_RS19935 PF01678 Diaminopimelate epimerase LDN97_RS19940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDN97_RS19940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDN97_RS19950 PF01491 Frataxin-like domain LDN97_RS19955 PF02230 Phospholipase/Carboxylesterase LDN97_RS19960 PF01295 Adenylate cyclase, class-I LDN97_RS19960 PF12633 Adenylate cyclase NT domain LDN97_RS19965 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LDN97_RS19965 PF03900 Porphobilinogen deaminase, C-terminal domain LDN97_RS19970 PF02602 Uroporphyrinogen-III synthase HemD LDN97_RS19975 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LDN97_RS19980 PF07219 HemY protein N-terminus LDN97_RS19980 PF07719 Tetratricopeptide repeat LDN97_RS19990 PF01523 Putative modulator of DNA gyrase LDN97_RS19995 PF04751 Protein of unknown function (DUF615) LDN97_RS20005 PF04363 Protein of unknown function (DUF496) LDN97_RS20035 PF01381 Helix-turn-helix LDN97_RS20035 PF07883 Cupin domain LDN97_RS20040 PF03594 Benzoate membrane transport protein LDN97_RS20050 PF02219 Methylenetetrahydrofolate reductase LDN97_RS20065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS20065 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS20065 PF00672 HAMP domain LDN97_RS20070 PF03922 OmpW family LDN97_RS20075 PF00005 ABC transporter LDN97_RS20075 PF17755 UvrA DNA-binding domain LDN97_RS20075 PF17760 UvrA interaction domain LDN97_RS20080 PF00196 Bacterial regulatory proteins, luxR family LDN97_RS20085 PF00436 Single-strand binding protein family LDN97_RS20100 PF00313 'Cold-shock' DNA-binding domain LDN97_RS20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS20105 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS20105 PF00672 HAMP domain LDN97_RS20110 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS20110 PF00072 Response regulator receiver domain LDN97_RS20120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS20120 PF00672 HAMP domain LDN97_RS20130 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS20130 PF08448 PAS fold LDN97_RS20135 PF00543 Nitrogen regulatory protein P-II LDN97_RS20140 PF00909 Ammonium Transporter Family LDN97_RS20150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS20160 PF00912 Transglycosylase LDN97_RS20160 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS20165 PF13538 UvrD-like helicase C-terminal domain LDN97_RS20170 PF12705 PD-(D/E)XK nuclease superfamily LDN97_RS20170 PF00580 UvrD/REP helicase N-terminal domain LDN97_RS20170 PF13361 UvrD-like helicase C-terminal domain LDN97_RS20175 PF17946 RecC C-terminal domain LDN97_RS20180 PF07681 DoxX LDN97_RS20185 PF02678 Pirin LDN97_RS20185 PF17954 Quercetinase C-terminal cupin domain LDN97_RS20195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS20195 PF03466 LysR substrate binding domain LDN97_RS20205 PF00392 Bacterial regulatory proteins, gntR family LDN97_RS20205 PF07702 UTRA domain LDN97_RS20220 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS20230 PF00005 ABC transporter LDN97_RS20230 PF08402 TOBE domain LDN97_RS20240 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS20240 PF00072 Response regulator receiver domain LDN97_RS20260 PF00583 Acetyltransferase (GNAT) family LDN97_RS20265 PF00199 Catalase LDN97_RS20265 PF06628 Catalase-related immune-responsive LDN97_RS20285 PF00293 NUDIX domain LDN97_RS20290 PF01594 AI-2E family transporter LDN97_RS20295 PF00106 short chain dehydrogenase LDN97_RS20300 PF04371 Porphyromonas-type peptidyl-arginine deiminase LDN97_RS20305 PF13416 Bacterial extracellular solute-binding protein LDN97_RS20310 PF00795 Carbon-nitrogen hydrolase LDN97_RS20315 PF04371 Porphyromonas-type peptidyl-arginine deiminase LDN97_RS20320 PF03466 LysR substrate binding domain LDN97_RS20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS20325 PF00158 Sigma-54 interaction domain LDN97_RS20325 PF00989 PAS fold LDN97_RS20325 PF02954 Bacterial regulatory protein, Fis family LDN97_RS20330 PF00391 PEP-utilising enzyme, mobile domain LDN97_RS20330 PF05524 PEP-utilising enzyme, N-terminal LDN97_RS20330 PF03610 PTS system fructose IIA component LDN97_RS20330 PF00381 PTS HPr component phosphorylation site LDN97_RS20335 PF02734 DAK2 domain LDN97_RS20340 PF02733 Dak1 domain LDN97_RS20345 PF00860 Permease family LDN97_RS20350 PF01695 IstB-like ATP binding protein LDN97_RS20355 PF00665 Integrase core domain LDN97_RS20360 PF03079 ARD/ARD' family LDN97_RS20395 PF00009 Elongation factor Tu GTP binding domain LDN97_RS20395 PF03143 Elongation factor Tu C-terminal domain LDN97_RS20395 PF03144 Elongation factor Tu domain 2 LDN97_RS20400 PF03144 Elongation factor Tu domain 2 LDN97_RS20400 PF00009 Elongation factor Tu GTP binding domain LDN97_RS20400 PF03764 Elongation factor G, domain IV LDN97_RS20400 PF14492 Elongation Factor G, domain II LDN97_RS20400 PF00679 Elongation factor G C-terminus LDN97_RS20405 PF00177 Ribosomal protein S7p/S5e LDN97_RS20410 PF00164 Ribosomal protein S12/S23 LDN97_RS20415 PF04077 DsrH like protein LDN97_RS20420 PF02635 DsrE/DsrF-like family LDN97_RS20425 PF02635 DsrE/DsrF-like family LDN97_RS20430 PF01042 Endoribonuclease L-PSP LDN97_RS20435 PF13309 HTH domain LDN97_RS20435 PF08348 YheO-like PAS domain LDN97_RS20440 PF04997 RNA polymerase Rpb1, domain 1 LDN97_RS20440 PF05000 RNA polymerase Rpb1, domain 4 LDN97_RS20440 PF04983 RNA polymerase Rpb1, domain 3 LDN97_RS20440 PF04998 RNA polymerase Rpb1, domain 5 LDN97_RS20440 PF00623 RNA polymerase Rpb1, domain 2 LDN97_RS20445 PF04560 RNA polymerase Rpb2, domain 7 LDN97_RS20445 PF00562 RNA polymerase Rpb2, domain 6 LDN97_RS20445 PF10385 RNA polymerase beta subunit external 1 domain LDN97_RS20445 PF04565 RNA polymerase Rpb2, domain 3 LDN97_RS20445 PF04561 RNA polymerase Rpb2, domain 2 LDN97_RS20445 PF04563 RNA polymerase beta subunit LDN97_RS20450 PF16320 Ribosomal protein L7/L12 dimerisation domain LDN97_RS20450 PF00542 Ribosomal protein L7/L12 C-terminal domain LDN97_RS20455 PF00466 Ribosomal protein L10 LDN97_RS20460 PF00687 Ribosomal protein L1p/L10e family LDN97_RS20465 PF03946 Ribosomal protein L11, N-terminal domain LDN97_RS20465 PF00298 Ribosomal protein L11, RNA binding domain LDN97_RS20470 PF00467 KOW motif LDN97_RS20470 PF02357 Transcription termination factor nusG LDN97_RS20475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LDN97_RS20485 PF03144 Elongation factor Tu domain 2 LDN97_RS20485 PF03143 Elongation factor Tu C-terminal domain LDN97_RS20485 PF00009 Elongation factor Tu GTP binding domain LDN97_RS20500 PF00485 Phosphoribulokinase / Uridine kinase family LDN97_RS20505 PF02237 Biotin protein ligase C terminal domain LDN97_RS20505 PF03099 Biotin/lipoate A/B protein ligase family LDN97_RS20505 PF08279 HTH domain LDN97_RS20510 PF01565 FAD binding domain LDN97_RS20510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDN97_RS20515 PF02254 TrkA-N domain LDN97_RS20515 PF02080 TrkA-C domain LDN97_RS20520 PF02386 Cation transport protein LDN97_RS20525 PF01131 DNA topoisomerase LDN97_RS20525 PF01751 Toprim domain LDN97_RS20530 PF03264 NapC/NirT cytochrome c family, N-terminal region LDN97_RS20535 PF18364 Molybdopterin oxidoreductase N-terminal domain LDN97_RS20535 PF00384 Molybdopterin oxidoreductase LDN97_RS20535 PF01568 Molydopterin dinucleotide binding domain LDN97_RS20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS20550 PF00072 Response regulator receiver domain LDN97_RS20550 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS20565 PF01794 Ferric reductase like transmembrane component LDN97_RS20570 PF00174 Oxidoreductase molybdopterin binding domain LDN97_RS20575 PF06496 Protein of unknown function (DUF1097) LDN97_RS20580 PF00072 Response regulator receiver domain LDN97_RS20580 PF00158 Sigma-54 interaction domain LDN97_RS20590 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS20610 PF00571 CBS domain LDN97_RS20610 PF00478 IMP dehydrogenase / GMP reductase domain LDN97_RS20620 PF01037 Lrp/AsnC ligand binding domain LDN97_RS20625 PF03590 Aspartate-ammonia ligase LDN97_RS20635 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS20635 PF07724 AAA domain (Cdc48 subfamily) LDN97_RS20635 PF17871 AAA lid domain LDN97_RS20635 PF02861 Clp amino terminal domain, pathogenicity island component LDN97_RS20635 PF10431 C-terminal, D2-small domain, of ClpB protein LDN97_RS20640 PF02578 Multi-copper polyphenol oxidoreductase laccase LDN97_RS20645 PF01479 S4 domain LDN97_RS20645 PF00849 RNA pseudouridylate synthase LDN97_RS20650 PF13525 Outer membrane lipoprotein LDN97_RS20655 PF03313 Serine dehydratase alpha chain LDN97_RS20660 PF08348 YheO-like PAS domain LDN97_RS20660 PF13309 HTH domain LDN97_RS20665 PF02233 NAD(P) transhydrogenase beta subunit LDN97_RS20670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDN97_RS20670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LDN97_RS20670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LDN97_RS20675 PF00465 Iron-containing alcohol dehydrogenase LDN97_RS20680 PF06719 AraC-type transcriptional regulator N-terminus LDN97_RS20680 PF12833 Helix-turn-helix domain LDN97_RS20685 PF08212 Lipocalin-like domain LDN97_RS20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS20695 PF00672 HAMP domain LDN97_RS20705 PF03466 LysR substrate binding domain LDN97_RS20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS20725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDN97_RS20725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDN97_RS20730 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LDN97_RS20730 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LDN97_RS20735 PF01316 Arginine repressor, DNA binding domain LDN97_RS20735 PF02863 Arginine repressor, C-terminal domain LDN97_RS20740 PF03606 C4-dicarboxylate anaerobic carrier LDN97_RS20745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDN97_RS20745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDN97_RS20750 PF00696 Amino acid kinase family LDN97_RS20765 PF02743 Cache domain LDN97_RS20765 PF00672 HAMP domain LDN97_RS20765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS20770 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS20775 PF00005 ABC transporter LDN97_RS20780 PF13407 Periplasmic binding protein domain LDN97_RS20785 PF02837 Glycosyl hydrolases family 2, sugar binding domain LDN97_RS20785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LDN97_RS20785 PF16353 Domain of unknown function(DUF4981) LDN97_RS20785 PF02929 Beta galactosidase small chain LDN97_RS20785 PF00703 Glycosyl hydrolases family 2 LDN97_RS20790 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS20795 PF16363 GDP-mannose 4,6 dehydratase LDN97_RS20800 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LDN97_RS20800 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LDN97_RS20805 PF10509 Galactokinase galactose-binding signature LDN97_RS20805 PF00288 GHMP kinases N terminal domain LDN97_RS20805 PF08544 GHMP kinases C terminal LDN97_RS20810 PF01263 Aldose 1-epimerase LDN97_RS20815 PF00248 Aldo/keto reductase family LDN97_RS20820 PF02673 Bacitracin resistance protein BacA LDN97_RS20825 PF12973 ChrR Cupin-like domain LDN97_RS20830 PF04545 Sigma-70, region 4 LDN97_RS20830 PF04542 Sigma-70 region 2 LDN97_RS20840 PF00750 tRNA synthetases class I (R) LDN97_RS20840 PF03485 Arginyl tRNA synthetase N terminal domain LDN97_RS20840 PF05746 DALR anticodon binding domain LDN97_RS20850 PF00227 Proteasome subunit LDN97_RS20855 PF00004 ATPase family associated with various cellular activities (AAA) LDN97_RS20855 PF10431 C-terminal, D2-small domain, of ClpB protein LDN97_RS20855 PF07724 AAA domain (Cdc48 subfamily) LDN97_RS20860 PF07690 Major Facilitator Superfamily LDN97_RS20875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDN97_RS20880 PF00005 ABC transporter LDN97_RS20895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDN97_RS20895 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDN97_RS20895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDN97_RS20895 PF04324 BFD-like [2Fe-2S] binding domain LDN97_RS20895 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS20900 PF13806 Rieske-like [2Fe-2S] domain LDN97_RS20905 PF01226 Formate/nitrite transporter LDN97_RS20910 PF10414 Sirohaem synthase dimerisation region LDN97_RS20910 PF14824 Sirohaem biosynthesis protein central LDN97_RS20910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDN97_RS20915 PF01769 Divalent cation transporter LDN97_RS20915 PF00571 CBS domain LDN97_RS20915 PF03448 MgtE intracellular N domain LDN97_RS20920 PF03737 Aldolase/RraA LDN97_RS20925 PF02592 Putative vitamin uptake transporter LDN97_RS20935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LDN97_RS20940 PF00034 Cytochrome c LDN97_RS20945 PF16124 RecQ zinc-binding LDN97_RS20945 PF00570 HRDC domain LDN97_RS20945 PF00271 Helicase conserved C-terminal domain LDN97_RS20945 PF00270 DEAD/DEAH box helicase LDN97_RS20945 PF09382 RQC domain LDN97_RS20950 PF03061 Thioesterase superfamily LDN97_RS20965 PF03475 3-alpha domain LDN97_RS20965 PF03473 MOSC domain LDN97_RS20970 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS20975 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS20980 PF00005 ABC transporter LDN97_RS20980 PF08402 TOBE domain LDN97_RS20985 PF13416 Bacterial extracellular solute-binding protein LDN97_RS20990 PF13416 Bacterial extracellular solute-binding protein LDN97_RS20995 PF00202 Aminotransferase class-III LDN97_RS21000 PF00120 Glutamine synthetase, catalytic domain LDN97_RS21005 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDN97_RS21020 PF05981 CreA protein LDN97_RS21025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDN97_RS21025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDN97_RS21030 PF00012 Hsp70 protein LDN97_RS21045 PF00128 Alpha amylase, catalytic domain LDN97_RS21045 PF02903 Alpha amylase, N-terminal ig-like domain LDN97_RS21060 PF05958 tRNA (Uracil-5-)-methyltransferase LDN97_RS21065 PF00072 Response regulator receiver domain LDN97_RS21065 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS21070 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS21070 PF00672 HAMP domain LDN97_RS21080 PF03949 Malic enzyme, NAD binding domain LDN97_RS21080 PF00390 Malic enzyme, N-terminal domain LDN97_RS21085 PF13460 NAD(P)H-binding LDN97_RS21085 PF11066 Protein of unknown function (DUF2867) LDN97_RS21090 PF01197 Ribosomal protein L31 LDN97_RS21095 PF00271 Helicase conserved C-terminal domain LDN97_RS21095 PF17764 3′ DNA-binding domain (3′BD) LDN97_RS21095 PF18074 Primosomal protein N C-terminal domain LDN97_RS21095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDN97_RS21095 PF00270 DEAD/DEAH box helicase LDN97_RS21100 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS21110 PF00691 OmpA family LDN97_RS21110 PF01389 OmpA-like transmembrane domain LDN97_RS21115 PF00585 C-terminal regulatory domain of Threonine dehydratase LDN97_RS21115 PF00291 Pyridoxal-phosphate dependent enzyme LDN97_RS21120 PF00920 Dehydratase family LDN97_RS21125 PF01063 Amino-transferase class IV LDN97_RS21135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDN97_RS21135 PF00205 Thiamine pyrophosphate enzyme, central domain LDN97_RS21135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDN97_RS21140 PF01078 Magnesium chelatase, subunit ChlI LDN97_RS21140 PF13335 Magnesium chelatase, subunit ChlI C-terminal LDN97_RS21145 PF01553 Acyltransferase LDN97_RS21150 PF01553 Acyltransferase LDN97_RS21155 PF04463 Protein of unknown function (DUF523) LDN97_RS21165 PF00857 Isochorismatase family LDN97_RS21170 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDN97_RS21170 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDN97_RS21175 PF01323 DSBA-like thioredoxin domain LDN97_RS21180 PF01636 Phosphotransferase enzyme family LDN97_RS21185 PF12801 4Fe-4S binding domain LDN97_RS21185 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LDN97_RS21185 PF13746 4Fe-4S dicluster domain LDN97_RS21190 PF06288 Protein of unknown function (DUF1040) LDN97_RS21195 PF00563 EAL domain LDN97_RS21195 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS21195 PF01590 GAF domain LDN97_RS21195 PF00360 Phytochrome region LDN97_RS21200 PF00376 MerR family regulatory protein LDN97_RS21200 PF09278 MerR, DNA binding LDN97_RS21205 PF00403 Heavy-metal-associated domain LDN97_RS21210 PF00156 Phosphoribosyl transferase domain LDN97_RS21215 PF03725 3' exoribonuclease family, domain 2 LDN97_RS21215 PF01138 3' exoribonuclease family, domain 1 LDN97_RS21220 PF03755 YicC-like family, N-terminal region LDN97_RS21220 PF08340 Domain of unknown function (DUF1732) LDN97_RS21265 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LDN97_RS21270 PF01867 CRISPR associated protein Cas1 LDN97_RS21275 PF08798 CRISPR associated protein LDN97_RS21285 PF09344 CT1975-like protein LDN97_RS21295 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) LDN97_RS21300 PF18395 Cas3 C-terminal domain LDN97_RS21300 PF18019 HD domain LDN97_RS21320 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LDN97_RS21325 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDN97_RS21330 PF00535 Glycosyl transferase family 2 LDN97_RS21335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDN97_RS21340 PF01467 Cytidylyltransferase-like LDN97_RS21345 PF04393 Protein of unknown function (DUF535) LDN97_RS21350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDN97_RS21350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDN97_RS21350 PF06827 Zinc finger found in FPG and IleRS LDN97_RS21360 PF00471 Ribosomal protein L33 LDN97_RS21365 PF00830 Ribosomal L28 family LDN97_RS21370 PF04002 RadC-like JAB domain LDN97_RS21375 PF04127 DNA / pantothenate metabolism flavoprotein LDN97_RS21375 PF02441 Flavoprotein LDN97_RS21380 PF00692 dUTPase LDN97_RS21385 PF00440 Bacterial regulatory proteins, tetR family LDN97_RS21410 PF05552 Conserved TM helix LDN97_RS21410 PF00924 Mechanosensitive ion channel LDN97_RS21420 PF00342 Phosphoglucose isomerase LDN97_RS21430 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LDN97_RS21430 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDN97_RS21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS21435 PF03466 LysR substrate binding domain LDN97_RS21445 PF13380 CoA binding domain LDN97_RS21445 PF13607 Succinyl-CoA ligase like flavodoxin domain LDN97_RS21445 PF00583 Acetyltransferase (GNAT) family LDN97_RS21475 PF12724 Flavodoxin domain LDN97_RS21480 PF02386 Cation transport protein LDN97_RS21485 PF09186 Domain of unknown function (DUF1949) LDN97_RS21485 PF01205 Uncharacterized protein family UPF0029 LDN97_RS21490 PF00557 Metallopeptidase family M24 LDN97_RS21495 PF13193 AMP-binding enzyme C-terminal domain LDN97_RS21495 PF00501 AMP-binding enzyme LDN97_RS21500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDN97_RS21500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDN97_RS21500 PF00378 Enoyl-CoA hydratase/isomerase LDN97_RS21505 PF02803 Thiolase, C-terminal domain LDN97_RS21505 PF00108 Thiolase, N-terminal domain LDN97_RS21510 PF00072 Response regulator receiver domain LDN97_RS21510 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS21515 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS21515 PF00672 HAMP domain LDN97_RS21515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS21520 PF01547 Bacterial extracellular solute-binding protein LDN97_RS21540 PF01206 Sulfurtransferase TusA LDN97_RS21545 PF01042 Endoribonuclease L-PSP LDN97_RS21565 PF13488 Glycine zipper LDN97_RS21565 PF00691 OmpA family LDN97_RS21575 PF00857 Isochorismatase family LDN97_RS21580 PF03352 Methyladenine glycosylase LDN97_RS21585 PF02091 Glycyl-tRNA synthetase alpha subunit LDN97_RS21590 PF05746 DALR anticodon binding domain LDN97_RS21590 PF02092 Glycyl-tRNA synthetase beta subunit LDN97_RS21600 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS21600 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS21600 PF00563 EAL domain LDN97_RS21620 PF03222 Tryptophan/tyrosine permease family LDN97_RS21625 PF03222 Tryptophan/tyrosine permease family LDN97_RS21630 PF01212 Beta-eliminating lyase LDN97_RS21640 PF12801 4Fe-4S binding domain LDN97_RS21650 PF18113 Rubredoxin binding C-terminal domain LDN97_RS21650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDN97_RS21655 PF00753 Metallo-beta-lactamase superfamily LDN97_RS21655 PF00258 Flavodoxin LDN97_RS21655 PF00301 Rubredoxin LDN97_RS21660 PF01590 GAF domain LDN97_RS21660 PF00158 Sigma-54 interaction domain LDN97_RS21665 PF00356 Bacterial regulatory proteins, lacI family LDN97_RS21670 PF13458 Periplasmic binding protein LDN97_RS21675 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS21680 PF02653 Branched-chain amino acid transport system / permease component LDN97_RS21680 PF11862 Domain of unknown function (DUF3382) LDN97_RS21685 PF00005 ABC transporter LDN97_RS21685 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDN97_RS21690 PF00005 ABC transporter LDN97_RS21700 PF01810 LysE type translocator LDN97_RS21705 PF00581 Rhodanese-like domain LDN97_RS21710 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LDN97_RS21710 PF01694 Rhomboid family LDN97_RS21715 PF12262 Bacterial virulence factor lipase N-terminal LDN97_RS21720 PF04380 Membrane fusogenic activity LDN97_RS21725 PF00175 Oxidoreductase NAD-binding domain LDN97_RS21730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LDN97_RS21740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDN97_RS21740 PF07498 Rho termination factor, N-terminal domain LDN97_RS21740 PF07497 Rho termination factor, RNA-binding domain LDN97_RS21745 PF00085 Thioredoxin LDN97_RS21750 PF00270 DEAD/DEAH box helicase LDN97_RS21750 PF00271 Helicase conserved C-terminal domain LDN97_RS21755 PF02541 Ppx/GppA phosphatase family LDN97_RS21765 PF04445 Putative SAM-dependent methyltransferase LDN97_RS21770 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS21770 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS21770 PF00563 EAL domain LDN97_RS21775 PF01432 Peptidase family M3 LDN97_RS21780 PF00490 Delta-aminolevulinic acid dehydratase LDN97_RS21785 PF01026 TatD related DNase LDN97_RS21790 PF00902 Sec-independent protein translocase protein (TatC) LDN97_RS21795 PF02416 mttA/Hcf106 family LDN97_RS21800 PF02416 mttA/Hcf106 family LDN97_RS21805 PF03109 ABC1 family LDN97_RS21810 PF02036 SCP-2 sterol transfer family LDN97_RS21815 PF01209 ubiE/COQ5 methyltransferase family LDN97_RS21820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDN97_RS21830 PF01695 IstB-like ATP binding protein LDN97_RS21835 PF00665 Integrase core domain LDN97_RS21880 PF03544 Gram-negative bacterial TonB protein C-terminal LDN97_RS21885 PF02472 Biopolymer transport protein ExbD/TolR LDN97_RS21890 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS21895 PF01618 MotA/TolQ/ExbB proton channel family LDN97_RS21910 PF00072 Response regulator receiver domain LDN97_RS21910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDN97_RS21910 PF01627 Hpt domain LDN97_RS21910 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS21910 PF00672 HAMP domain LDN97_RS21915 PF00072 Response regulator receiver domain LDN97_RS21920 PF01380 SIS domain LDN97_RS21925 PF00455 DeoR C terminal sensor domain LDN97_RS21925 PF08220 DeoR-like helix-turn-helix domain LDN97_RS21930 PF00072 Response regulator receiver domain LDN97_RS21930 PF00486 Transcriptional regulatory protein, C terminal LDN97_RS21935 PF00672 HAMP domain LDN97_RS21935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDN97_RS21935 PF00512 His Kinase A (phospho-acceptor) domain LDN97_RS21940 PF00905 Penicillin binding protein transpeptidase domain LDN97_RS21945 PF06123 Inner membrane protein CreD LDN97_RS21950 PF00132 Bacterial transferase hexapeptide (six repeats) LDN97_RS21950 PF14602 Hexapeptide repeat of succinyl-transferase LDN97_RS21950 PF12804 MobA-like NTP transferase domain LDN97_RS21955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDN97_RS21955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDN97_RS21960 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDN97_RS21960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDN97_RS21965 PF00231 ATP synthase LDN97_RS21970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDN97_RS21970 PF00306 ATP synthase alpha/beta chain, C terminal domain LDN97_RS21970 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDN97_RS21975 PF00213 ATP synthase delta (OSCP) subunit LDN97_RS21980 PF00430 ATP synthase B/B' CF(0) LDN97_RS21985 PF00137 ATP synthase subunit C LDN97_RS21990 PF00119 ATP synthase A chain LDN97_RS22000 PF17762 HTH domain found in ParB protein LDN97_RS22000 PF02195 ParB-like nuclease domain LDN97_RS22005 PF13614 AAA domain LDN97_RS22010 PF02527 rRNA small subunit methyltransferase G LDN97_RS22015 PF01134 Glucose inhibited division protein A LDN97_RS22015 PF13932 GidA associated domain LDN97_RS22020 PF00258 Flavodoxin LDN97_RS22025 PF00593 TonB dependent receptor LDN97_RS22025 PF07715 TonB-dependent Receptor Plug Domain LDN97_RS22030 PF00005 ABC transporter LDN97_RS22035 PF00005 ABC transporter LDN97_RS22040 PF01497 Periplasmic binding protein LDN97_RS22045 PF01032 FecCD transport family LDN97_RS22050 PF12631 MnmE helical domain LDN97_RS22050 PF01926 50S ribosome-binding GTPase LDN97_RS22050 PF10396 GTP-binding protein TrmE N-terminus LDN97_RS22055 PF02096 60Kd inner membrane protein LDN97_RS22055 PF14849 YidC periplasmic domain LDN97_RS22060 PF01809 Putative membrane protein insertion efficiency factor LDN97_RS22065 PF00825 Ribonuclease P LDN97_RS22070 PF00468 Ribosomal protein L34 LDN97_RS22075 PF00005 ABC transporter LDN97_RS22080 PF00528 Binding-protein-dependent transport system inner membrane component LDN97_RS22085 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDN97_RS22130 PF01695 IstB-like ATP binding protein LDN97_RS22135 PF00665 Integrase core domain LDN97_RS22140 PF04381 Putative exonuclease, RdgC LDN97_RS22145 PF01609 Transposase DDE domain LDN97_RS22190 PF00565 Staphylococcal nuclease homologue LDN97_RS22195 PF00216 Bacterial DNA-binding protein LDN97_RS22220 PF13614 AAA domain LDN97_RS22225 PF02195 ParB-like nuclease domain LDN97_RS22225 PF08535 KorB domain LDN97_RS22225 PF06613 KorB C-terminal beta-barrel domain LDN97_RS22265 PF10544 T5orf172 domain LDN97_RS22285 PF01131 DNA topoisomerase LDN97_RS22285 PF01751 Toprim domain LDN97_RS22355 PF00263 Bacterial type II and III secretion system protein LDN97_RS22355 PF03958 Bacterial type II/III secretion system short domain LDN97_RS22380 PF10411 Disulfide bond isomerase protein N-terminus LDN97_RS22380 PF13098 Thioredoxin-like domain LDN97_RS22400 PF12477 Sex factor F TraW protein N terminal LDN97_RS22410 PF06834 TraU protein LDN97_RS22415 PF06986 Type-1V conjugative transfer system mating pair stabilisation LDN97_RS22420 PF01609 Transposase DDE domain LDN97_RS22430 PF01609 Transposase DDE domain LDN97_RS22435 PF07516 SecA Wing and Scaffold domain LDN97_RS22435 PF01043 SecA preprotein cross-linking domain LDN97_RS22435 PF02810 SEC-C motif LDN97_RS22435 PF07517 SecA DEAD-like domain LDN97_RS22450 PF00483 Nucleotidyl transferase LDN97_RS22490 PF07728 AAA domain (dynein-related subfamily) LDN97_RS22490 PF08406 CbbQ/NirQ/NorQ C-terminal LDN97_RS22555 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS22615 PF02796 Helix-turn-helix domain of resolvase LDN97_RS22615 PF00239 Resolvase, N terminal domain LDN97_RS22650 PF00239 Resolvase, N terminal domain LDN97_RS22650 PF02796 Helix-turn-helix domain of resolvase LDN97_RS22655 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LDN97_RS22660 PF03707 Bacterial signalling protein N terminal repeat LDN97_RS22660 PF00563 EAL domain LDN97_RS22660 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS22665 PF13407 Periplasmic binding protein domain LDN97_RS22690 PF02796 Helix-turn-helix domain of resolvase LDN97_RS22690 PF00239 Resolvase, N terminal domain LDN97_RS22715 PF01526 Tn3 transposase DDE domain LDN97_RS22715 PF13700 Domain of unknown function (DUF4158) LDN97_RS22730 PF03743 Bacterial conjugation TrbI-like protein LDN97_RS22740 PF03466 LysR substrate binding domain LDN97_RS22740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS22745 PF01047 MarR family LDN97_RS22780 PF01625 Peptide methionine sulfoxide reductase LDN97_RS22790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDN97_RS22790 PF03466 LysR substrate binding domain LDN97_RS22795 PF01641 SelR domain LDN97_RS22800 PF01625 Peptide methionine sulfoxide reductase LDN97_RS22805 PF02798 Glutathione S-transferase, N-terminal domain LDN97_RS22805 PF00043 Glutathione S-transferase, C-terminal domain LDN97_RS22855 PF08240 Alcohol dehydrogenase GroES-like domain LDN97_RS22855 PF00107 Zinc-binding dehydrogenase LDN97_RS22860 PF00174 Oxidoreductase molybdopterin binding domain LDN97_RS22865 PF00111 2Fe-2S iron-sulfur cluster binding domain LDN97_RS22865 PF00175 Oxidoreductase NAD-binding domain LDN97_RS22865 PF00970 Oxidoreductase FAD-binding domain LDN97_RS22870 PF00108 Thiolase, N-terminal domain LDN97_RS22870 PF02803 Thiolase, C-terminal domain LDN97_RS22875 PF00462 Glutaredoxin LDN97_RS22970 PF02899 Phage integrase, N-terminal SAM-like domain LDN97_RS22970 PF00589 Phage integrase family LDN97_RS22975 PF01381 Helix-turn-helix LDN97_RS22980 PF07804 HipA-like C-terminal domain LDN97_RS22980 PF13657 HipA N-terminal domain LDN97_RS22990 PF00665 Integrase core domain LDN97_RS22995 PF01695 IstB-like ATP binding protein LDN97_RS23005 PF05638 Type VI secretion system effector, Hcp LDN97_RS23015 PF04717 Type VI secretion system, phage-baseplate injector LDN97_RS23050 PF01609 Transposase DDE domain LDN97_RS23050 PF13808 DDE_Tnp_1-associated LDN97_RS23065 PF02463 RecF/RecN/SMC N terminal domain LDN97_RS23100 PF12729 Four helix bundle sensory module for signal transduction LDN97_RS23100 PF00672 HAMP domain LDN97_RS23100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS23105 PF05598 Transposase domain (DUF772) LDN97_RS23105 PF01609 Transposase DDE domain LDN97_RS23120 PF01695 IstB-like ATP binding protein LDN97_RS23125 PF00665 Integrase core domain LDN97_RS23140 PF06122 Conjugative relaxosome accessory transposon protein LDN97_RS23205 PF07042 TrfA protein LDN97_RS23215 PF02796 Helix-turn-helix domain of resolvase LDN97_RS23215 PF00239 Resolvase, N terminal domain LDN97_RS23255 PF03230 Antirestriction protein LDN97_RS23270 PF17383 Uncharacterized KorC regulated protein A LDN97_RS23275 PF10892 Protein of unknown function (DUF2688) LDN97_RS23280 PF17394 Uncharacterized KleE stable inheritance protein LDN97_RS23285 PF10959 Protein of unknown function (DUF2761) LDN97_RS23290 PF16509 TrfB plasmid transcriptional repressor LDN97_RS23295 PF13614 AAA domain LDN97_RS23300 PF08535 KorB domain LDN97_RS23300 PF06613 KorB C-terminal beta-barrel domain LDN97_RS23300 PF02195 ParB-like nuclease domain LDN97_RS23305 PF11740 Plasmid replication region DNA-binding N-term LDN97_RS23320 PF11657 Transcriptional activator TraM LDN97_RS23325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDN97_RS23330 PF17273 Family of unknown function (DUF5338) LDN97_RS23340 PF03432 Relaxase/Mobilisation nuclease domain LDN97_RS23340 PF18821 Large polyvalent protein-associated domain 7 LDN97_RS23345 PF02534 Type IV secretory system Conjugative DNA transfer LDN97_RS23350 PF10502 Signal peptidase, peptidase S26 LDN97_RS23355 PF01131 DNA topoisomerase LDN97_RS23355 PF01751 Toprim domain LDN97_RS23365 PF08401 Domain of unknown function (DUF1738) LDN97_RS23365 PF18818 Metallopeptidase superfamily domain LDN97_RS23365 PF13362 Toprim domain LDN97_RS23370 PF13495 Phage integrase, N-terminal SAM-like domain LDN97_RS23370 PF00589 Phage integrase family LDN97_RS23375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDN97_RS23400 PF00893 Small Multidrug Resistance protein LDN97_RS23405 PF00893 Small Multidrug Resistance protein LDN97_RS23410 PF00809 Pterin binding enzyme LDN97_RS23480 PF00239 Resolvase, N terminal domain LDN97_RS23480 PF02796 Helix-turn-helix domain of resolvase LDN97_RS23530 PF03743 Bacterial conjugation TrbI-like protein LDN97_RS23540 PF03524 Conjugal transfer protein LDN97_RS23550 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LDN97_RS23555 PF05101 Type IV secretory pathway, VirB3-like protein LDN97_RS23560 PF04956 TrbC/VIRB2 family LDN97_RS23565 PF00437 Type II/IV secretion system protein LDN97_RS23570 PF16509 TrfB plasmid transcriptional repressor LDN97_RS23575 PF00436 Single-strand binding protein family LDN97_RS23590 PF03389 MobA/MobL family LDN97_RS23590 PF01443 Viral (Superfamily 1) RNA helicase LDN97_RS23590 PF17841 BID domain of Bartonella effector protein (Bep) LDN97_RS23595 PF07820 TraC-like protein LDN97_RS23605 PF02534 Type IV secretory system Conjugative DNA transfer LDN97_RS23615 PF00565 Staphylococcal nuclease homologue LDN97_RS23620 PF11740 Plasmid replication region DNA-binding N-term LDN97_RS23635 PF00376 MerR family regulatory protein LDN97_RS23635 PF13614 AAA domain LDN97_RS23645 PF00239 Resolvase, N terminal domain LDN97_RS23645 PF02796 Helix-turn-helix domain of resolvase LDN97_RS23650 PF13495 Phage integrase, N-terminal SAM-like domain LDN97_RS23650 PF00589 Phage integrase family LDN97_RS23665 PF00239 Resolvase, N terminal domain LDN97_RS23665 PF02796 Helix-turn-helix domain of resolvase LDN97_RS23685 PF00730 HhH-GPD superfamily base excision DNA repair protein LDN97_RS23700 PF13180 PDZ domain LDN97_RS23730 PF05598 Transposase domain (DUF772) LDN97_RS23730 PF01609 Transposase DDE domain LDN97_RS23735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS23735 PF08447 PAS fold LDN97_RS23770 PF05713 Bacterial mobilisation protein (MobC) LDN97_RS23785 PF04899 MbeD/MobD like LDN97_RS23790 PF00990 Diguanylate cyclase, GGDEF domain LDN97_RS23835 PF16793 RepB DNA-primase from phage plasmid LDN97_RS23835 PF03389 MobA/MobL family LDN97_RS23860 PF05713 Bacterial mobilisation protein (MobC) LDN97_RS23890 PF04899 MbeD/MobD like LDN97_RS23910 PF07963 Prokaryotic N-terminal methylation motif LDN97_RS23910 PF08334 Type II secretion system (T2SS), protein G LDN97_RS23925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS23925 PF08447 PAS fold LDN97_RS23925 PF13426 PAS domain LDN97_RS23935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDN97_RS23935 PF08447 PAS fold LDN97_RS23935 PF13426 PAS domain