locus-tag class description NRK99_RS00005 PF00308 Bacterial dnaA protein NRK99_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NRK99_RS00005 PF11638 DnaA N-terminal domain NRK99_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NRK99_RS00010 PF02767 DNA polymerase III beta subunit, central domain NRK99_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NRK99_RS00015 PF02463 RecF/RecN/SMC N terminal domain NRK99_RS00020 PF00204 DNA gyrase B NRK99_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NRK99_RS00020 PF18053 DNA gyrase B subunit insert domain NRK99_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00020 PF01751 Toprim domain NRK99_RS00030 PF08279 HTH domain NRK99_RS00030 PF13280 WYL domain NRK99_RS00035 PF00011 Hsp20/alpha crystallin family NRK99_RS00040 PF00011 Hsp20/alpha crystallin family NRK99_RS00045 PF00155 Aminotransferase class I and II NRK99_RS00060 PF07690 Major Facilitator Superfamily NRK99_RS00065 PF00072 Response regulator receiver domain NRK99_RS00065 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS00070 PF13493 Domain of unknown function (DUF4118) NRK99_RS00070 PF13492 GAF domain NRK99_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00070 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS00070 PF02702 Osmosensitive K+ channel His kinase sensor domain NRK99_RS00075 PF02669 K+-transporting ATPase, c chain NRK99_RS00085 PF03814 Potassium-transporting ATPase A subunit NRK99_RS00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRK99_RS00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00100 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS00105 PF00873 AcrB/AcrD/AcrF family NRK99_RS00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS00115 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS00150 PF07690 Major Facilitator Superfamily NRK99_RS00160 PF00672 HAMP domain NRK99_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00160 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS00165 PF02954 Bacterial regulatory protein, Fis family NRK99_RS00165 PF00072 Response regulator receiver domain NRK99_RS00165 PF14532 Sigma-54 interaction domain NRK99_RS00175 PF12146 Serine aminopeptidase, S33 NRK99_RS00180 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS00185 PF00588 SpoU rRNA Methylase family NRK99_RS00185 PF12105 SpoU, rRNA methylase, C-terminal NRK99_RS00190 PF04607 Region found in RelA / SpoT proteins NRK99_RS00190 PF02824 TGS domain NRK99_RS00190 PF13291 ACT domain NRK99_RS00195 PF01192 RNA polymerase Rpb6 NRK99_RS00200 PF00625 Guanylate kinase NRK99_RS00205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRK99_RS00220 PF00892 EamA-like transporter family NRK99_RS00240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS00240 PF03466 LysR substrate binding domain NRK99_RS00245 PF00579 tRNA synthetases class I (W and Y) NRK99_RS00250 PF00582 Universal stress protein family NRK99_RS00255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRK99_RS00255 PF07055 Enoyl reductase FAD binding domain NRK99_RS00255 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRK99_RS00260 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS00265 PF00210 Ferritin-like domain NRK99_RS00275 PF07690 Major Facilitator Superfamily NRK99_RS00280 PF01810 LysE type translocator NRK99_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00285 PF06580 Histidine kinase NRK99_RS00285 PF07694 5TMR of 5TMR-LYT NRK99_RS00290 PF04397 LytTr DNA-binding domain NRK99_RS00290 PF00072 Response regulator receiver domain NRK99_RS00295 PF07690 Major Facilitator Superfamily NRK99_RS00300 PF02222 ATP-grasp domain NRK99_RS00300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRK99_RS00305 PF00731 AIR carboxylase NRK99_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS00320 PF03466 LysR substrate binding domain NRK99_RS00325 PF00593 TonB dependent receptor NRK99_RS00325 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS00330 PF01177 Asp/Glu/Hydantoin racemase NRK99_RS00360 PF00583 Acetyltransferase (GNAT) family NRK99_RS00360 PF13380 CoA binding domain NRK99_RS00360 PF13607 Succinyl-CoA ligase like flavodoxin domain NRK99_RS00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS00375 PF03466 LysR substrate binding domain NRK99_RS00380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NRK99_RS00380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NRK99_RS00385 PF00342 Phosphoglucose isomerase NRK99_RS00395 PF00924 Mechanosensitive ion channel NRK99_RS00395 PF05552 Conserved TM helix NRK99_RS00400 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS00405 PF00692 dUTPase NRK99_RS00410 PF04127 DNA / pantothenate metabolism flavoprotein NRK99_RS00410 PF02441 Flavoprotein NRK99_RS00415 PF04002 RadC-like JAB domain NRK99_RS00420 PF00830 Ribosomal L28 family NRK99_RS00425 PF00471 Ribosomal protein L33 NRK99_RS00435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NRK99_RS00435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NRK99_RS00435 PF06827 Zinc finger found in FPG and IleRS NRK99_RS00440 PF04393 Protein of unknown function (DUF535) NRK99_RS00445 PF01467 Cytidylyltransferase-like NRK99_RS00450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRK99_RS00455 PF00535 Glycosyl transferase family 2 NRK99_RS00460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRK99_RS00465 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NRK99_RS00470 PF03611 PTS system sugar-specific permease component NRK99_RS00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS00485 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS00485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRK99_RS00490 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS00490 PF00107 Zinc-binding dehydrogenase NRK99_RS00510 PF03748 Flagellar basal body-associated protein FliL NRK99_RS00515 PF04345 Chorismate lyase NRK99_RS00520 PF01040 UbiA prenyltransferase family NRK99_RS00525 PF01553 Acyltransferase NRK99_RS00530 PF00717 Peptidase S24-like NRK99_RS00530 PF01726 LexA DNA binding domain NRK99_RS00540 PF02630 SCO1/SenC NRK99_RS00545 PF01554 MatE NRK99_RS00550 PF00588 SpoU rRNA Methylase family NRK99_RS00555 PF16527 Two-component sensor protein CpxA, periplasmic domain NRK99_RS00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS00555 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS00555 PF00672 HAMP domain NRK99_RS00560 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS00560 PF00072 Response regulator receiver domain NRK99_RS00565 PF16916 Dimerisation domain of Zinc Transporter NRK99_RS00565 PF01545 Cation efflux family NRK99_RS00570 PF06426 Serine acetyltransferase, N-terminal NRK99_RS00570 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS00580 PF06005 Cell division protein ZapB NRK99_RS00590 PF00476 DNA polymerase family A NRK99_RS00590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRK99_RS00590 PF01367 5'-3' exonuclease, C-terminal SAM fold NRK99_RS00590 PF01612 3'-5' exonuclease NRK99_RS00595 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS00630 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS00635 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRK99_RS00635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRK99_RS00635 PF00703 Glycosyl hydrolases family 2 NRK99_RS00635 PF02929 Beta galactosidase small chain NRK99_RS00635 PF16353 Domain of unknown function(DUF4981) NRK99_RS00640 PF04074 YhcH/YjgK/YiaL NRK99_RS00645 PF13520 Amino acid permease NRK99_RS00650 PF01588 Putative tRNA binding domain NRK99_RS00655 PF13520 Amino acid permease NRK99_RS00660 PF13593 SBF-like CPA transporter family (DUF4137) NRK99_RS00665 PF03781 Sulfatase-modifying factor enzyme 1 NRK99_RS00665 PF12867 DinB superfamily NRK99_RS00675 PF00756 Putative esterase NRK99_RS00680 PF00107 Zinc-binding dehydrogenase NRK99_RS00680 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS00685 PF03466 LysR substrate binding domain NRK99_RS00690 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS00695 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS00700 PF00005 ABC transporter NRK99_RS00705 PF02608 ABC transporter substrate-binding protein PnrA-like NRK99_RS00715 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS00715 PF13361 UvrD-like helicase C-terminal domain NRK99_RS00720 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS00720 PF13361 UvrD-like helicase C-terminal domain NRK99_RS00725 PF00145 C-5 cytosine-specific DNA methylase NRK99_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS00745 PF03466 LysR substrate binding domain NRK99_RS00755 PF14001 YdfZ protein NRK99_RS00790 PF06206 CpeT/CpcT family (DUF1001) NRK99_RS00800 PF01810 LysE type translocator NRK99_RS00810 PF04143 Sulphur transport NRK99_RS00815 PF00690 Cation transporter/ATPase, N-terminus NRK99_RS00815 PF00689 Cation transporting ATPase, C-terminus NRK99_RS00820 PF01810 LysE type translocator NRK99_RS00825 PF12833 Helix-turn-helix domain NRK99_RS00830 PF00892 EamA-like transporter family NRK99_RS00840 PF00171 Aldehyde dehydrogenase family NRK99_RS00845 PF07883 Cupin domain NRK99_RS00845 PF01381 Helix-turn-helix NRK99_RS00850 PF00202 Aminotransferase class-III NRK99_RS00855 PF00171 Aldehyde dehydrogenase family NRK99_RS00860 PF00117 Glutamine amidotransferase class-I NRK99_RS00860 PF00958 GMP synthase C terminal domain NRK99_RS00860 PF02540 NAD synthase NRK99_RS00865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRK99_RS00865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRK99_RS00870 PF00294 pfkB family carbohydrate kinase NRK99_RS00875 PF02082 Transcriptional regulator NRK99_RS00890 PF02646 RmuC family NRK99_RS00895 PF02386 Cation transport protein NRK99_RS00900 PF02254 TrkA-N domain NRK99_RS00900 PF02080 TrkA-C domain NRK99_RS00905 PF01029 NusB family NRK99_RS00905 PF01189 16S rRNA methyltransferase RsmB/F NRK99_RS00910 PF00551 Formyl transferase NRK99_RS00910 PF02911 Formyl transferase, C-terminal domain NRK99_RS00915 PF01327 Polypeptide deformylase NRK99_RS00925 PF17782 DprA winged helix domain NRK99_RS00925 PF02481 DNA recombination-mediator protein A NRK99_RS00930 PF04361 Protein of unknown function (DUF494) NRK99_RS00935 PF01396 Topoisomerase DNA binding C4 zinc finger NRK99_RS00940 PF00731 AIR carboxylase NRK99_RS00945 PF01300 Telomere recombination NRK99_RS00950 PF01218 Coproporphyrinogen III oxidase NRK99_RS00955 PF08501 Shikimate dehydrogenase substrate binding domain NRK99_RS00955 PF01488 Shikimate / quinate 5-dehydrogenase NRK99_RS00955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NRK99_RS00960 PF07369 Protein of unknown function (DUF1488) NRK99_RS00965 PF01926 50S ribosome-binding GTPase NRK99_RS00970 PF00034 Cytochrome c NRK99_RS00975 PF04220 Der GTPase activator (YihI) NRK99_RS00980 PF10675 Protein of unknown function (DUF2489) NRK99_RS00985 PF04055 Radical SAM superfamily NRK99_RS00985 PF06969 HemN C-terminal domain NRK99_RS00990 PF00962 Adenosine/AMP deaminase NRK99_RS00995 PF00158 Sigma-54 interaction domain NRK99_RS00995 PF00072 Response regulator receiver domain NRK99_RS00995 PF02954 Bacterial regulatory protein, Fis family NRK99_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS01000 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS01000 PF00989 PAS fold NRK99_RS01010 PF00120 Glutamine synthetase, catalytic domain NRK99_RS01010 PF03951 Glutamine synthetase, beta-Grasp domain NRK99_RS01015 PF03144 Elongation factor Tu domain 2 NRK99_RS01015 PF00009 Elongation factor Tu GTP binding domain NRK99_RS01015 PF00679 Elongation factor G C-terminus NRK99_RS01020 PF03631 Virulence factor BrkB NRK99_RS01030 PF02580 D-Tyr-tRNA(Tyr) deacylase NRK99_RS01040 PF09500 Putative thioesterase (yiiD_Cterm) NRK99_RS01040 PF00583 Acetyltransferase (GNAT) family NRK99_RS01050 PF00271 Helicase conserved C-terminal domain NRK99_RS01050 PF00270 DEAD/DEAH box helicase NRK99_RS01050 PF17191 RecG wedge domain NRK99_RS01055 PF13091 PLD-like domain NRK99_RS01060 PF02447 GntP family permease NRK99_RS01065 PF01202 Shikimate kinase NRK99_RS01070 PF00920 Dehydratase family NRK99_RS01075 PF01081 KDPG and KHG aldolase NRK99_RS01080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRK99_RS01080 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS01090 PF01551 Peptidase family M23 NRK99_RS01095 PF01676 Metalloenzyme superfamily NRK99_RS01095 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NRK99_RS01100 PF00581 Rhodanese-like domain NRK99_RS01105 PF02556 Preprotein translocase subunit SecB NRK99_RS01110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NRK99_RS01110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NRK99_RS01115 PF01521 Iron-sulphur cluster biosynthesis NRK99_RS01115 PF01106 NifU-like domain NRK99_RS01120 PF00156 Phosphoribosyl transferase domain NRK99_RS01125 PF00561 alpha/beta hydrolase fold NRK99_RS01145 PF17674 HHH domain NRK99_RS01145 PF00575 S1 RNA binding domain NRK99_RS01145 PF09371 Tex-like protein N-terminal domain NRK99_RS01145 PF16921 Tex protein YqgF-like domain NRK99_RS01150 PF03449 Transcription elongation factor, N-terminal NRK99_RS01150 PF01272 Transcription elongation factor, GreA/GreB, C-term NRK99_RS01155 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS01155 PF00072 Response regulator receiver domain NRK99_RS01160 PF00672 HAMP domain NRK99_RS01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS01160 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS01170 PF00338 Ribosomal protein S10p/S20e NRK99_RS01175 PF00297 Ribosomal protein L3 NRK99_RS01180 PF00573 Ribosomal protein L4/L1 family NRK99_RS01185 PF00276 Ribosomal protein L23 NRK99_RS01190 PF03947 Ribosomal Proteins L2, C-terminal domain NRK99_RS01190 PF00181 Ribosomal Proteins L2, RNA binding domain NRK99_RS01195 PF00203 Ribosomal protein S19 NRK99_RS01200 PF00237 Ribosomal protein L22p/L17e NRK99_RS01205 PF00189 Ribosomal protein S3, C-terminal domain NRK99_RS01205 PF07650 KH domain NRK99_RS01210 PF00252 Ribosomal protein L16p/L10e NRK99_RS01215 PF00831 Ribosomal L29 protein NRK99_RS01220 PF00366 Ribosomal protein S17 NRK99_RS01225 PF00238 Ribosomal protein L14p/L23e NRK99_RS01230 PF00467 KOW motif NRK99_RS01230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NRK99_RS01235 PF00281 Ribosomal protein L5 NRK99_RS01235 PF00673 ribosomal L5P family C-terminus NRK99_RS01240 PF00253 Ribosomal protein S14p/S29e NRK99_RS01245 PF00410 Ribosomal protein S8 NRK99_RS01250 PF00347 Ribosomal protein L6 NRK99_RS01255 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NRK99_RS01260 PF00333 Ribosomal protein S5, N-terminal domain NRK99_RS01260 PF03719 Ribosomal protein S5, C-terminal domain NRK99_RS01265 PF00327 Ribosomal protein L30p/L7e NRK99_RS01270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NRK99_RS01275 PF00344 SecY translocase NRK99_RS01280 PF00444 Ribosomal protein L36 NRK99_RS01285 PF00416 Ribosomal protein S13/S18 NRK99_RS01290 PF00411 Ribosomal protein S11 NRK99_RS01295 PF01479 S4 domain NRK99_RS01295 PF00163 Ribosomal protein S4/S9 N-terminal domain NRK99_RS01300 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NRK99_RS01300 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NRK99_RS01300 PF01000 RNA polymerase Rpb3/RpoA insert domain NRK99_RS01305 PF01196 Ribosomal protein L17 NRK99_RS01350 PF00999 Sodium/hydrogen exchanger family NRK99_RS01350 PF02254 TrkA-N domain NRK99_RS01355 PF02525 Flavodoxin-like fold NRK99_RS01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS01360 PF03466 LysR substrate binding domain NRK99_RS01365 PF00106 short chain dehydrogenase NRK99_RS01380 PF00326 Prolyl oligopeptidase family NRK99_RS01380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRK99_RS01385 PF16868 NMT1-like family NRK99_RS01400 PF07947 YhhN family NRK99_RS01405 PF07690 Major Facilitator Superfamily NRK99_RS01410 PF13533 Biotin-lipoyl like NRK99_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS01415 PF03466 LysR substrate binding domain NRK99_RS01425 PF00375 Sodium:dicarboxylate symporter family NRK99_RS01430 PF10678 Protein of unknown function (DUF2492) NRK99_RS01435 PF01914 MarC family integral membrane protein NRK99_RS01440 PF03466 LysR substrate binding domain NRK99_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS01445 PF02416 mttA/Hcf106 family NRK99_RS01455 PF01464 Transglycosylase SLT domain NRK99_RS01465 PF13091 PLD-like domain NRK99_RS01475 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS01495 PF00448 SRP54-type protein, GTPase domain NRK99_RS01495 PF02881 SRP54-type protein, helical bundle domain NRK99_RS01500 PF00005 ABC transporter NRK99_RS01505 PF18075 FtsX extracellular domain NRK99_RS01510 PF04542 Sigma-70 region 2 NRK99_RS01510 PF00140 Sigma-70 factor, region 1.2 NRK99_RS01510 PF04545 Sigma-70, region 4 NRK99_RS01515 PF00484 Carbonic anhydrase NRK99_RS01520 PF07702 UTRA domain NRK99_RS01520 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS01525 PF01979 Amidohydrolase family NRK99_RS01530 PF00491 Arginase family NRK99_RS01535 PF01175 Urocanase Rossmann-like domain NRK99_RS01535 PF17392 Urocanase C-terminal domain NRK99_RS01535 PF17391 Urocanase N-terminal domain NRK99_RS01540 PF00221 Aromatic amino acid lyase NRK99_RS01545 PF01699 Sodium/calcium exchanger protein NRK99_RS01550 PF00563 EAL domain NRK99_RS01550 PF12792 CSS motif domain associated with EAL NRK99_RS01555 PF00563 EAL domain NRK99_RS01555 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS01555 PF17157 Gammaproteobacterial periplasmic sensor domain NRK99_RS01585 PF00263 Bacterial type II and III secretion system protein NRK99_RS01585 PF03958 Bacterial type II/III secretion system short domain NRK99_RS01600 PF00437 Type II/IV secretion system protein NRK99_RS01600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRK99_RS01605 PF00482 Type II secretion system (T2SS), protein F NRK99_RS01615 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS01625 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS01625 PF00114 Pilin (bacterial filament) NRK99_RS01655 PF04085 rod shape-determining protein MreC NRK99_RS01660 PF04093 rod shape-determining protein MreD NRK99_RS01665 PF02545 Maf-like protein NRK99_RS01670 PF10150 Ribonuclease E/G family NRK99_RS01670 PF00575 S1 RNA binding domain NRK99_RS01675 PF13116 Protein of unknown function NRK99_RS01675 PF13502 AsmA-like C-terminal region NRK99_RS01685 PF00795 Carbon-nitrogen hydrolase NRK99_RS01690 PF01523 Putative modulator of DNA gyrase NRK99_RS01700 PF01914 MarC family integral membrane protein NRK99_RS01705 PF07690 Major Facilitator Superfamily NRK99_RS01715 PF00072 Response regulator receiver domain NRK99_RS01720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS01720 PF00072 Response regulator receiver domain NRK99_RS01720 PF00672 HAMP domain NRK99_RS01720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS01720 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS01720 PF01627 Hpt domain NRK99_RS01730 PF08678 Rsbr N terminal NRK99_RS01730 PF01740 STAS domain NRK99_RS01735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS01735 PF08447 PAS fold NRK99_RS01735 PF13426 PAS domain NRK99_RS01750 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NRK99_RS01755 PF04228 Putative neutral zinc metallopeptidase NRK99_RS01765 PF08668 HDOD domain NRK99_RS01780 PF00999 Sodium/hydrogen exchanger family NRK99_RS01785 PF02607 B12 binding domain NRK99_RS01785 PF02310 B12 binding domain NRK99_RS01785 PF00809 Pterin binding enzyme NRK99_RS01785 PF02574 Homocysteine S-methyltransferase NRK99_RS01785 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRK99_RS01795 PF08443 RimK-like ATP-grasp domain NRK99_RS01795 PF18030 RimK PreATP-grasp domain NRK99_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS01805 PF00072 Response regulator receiver domain NRK99_RS01805 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS01820 PF01117 Aerolysin toxin NRK99_RS01820 PF03440 Aerolysin/Pertussis toxin (APT) domain NRK99_RS01825 PF13667 ThiC-associated domain NRK99_RS01825 PF01964 Radical SAM ThiC family NRK99_RS01830 PF02581 Thiamine monophosphate synthase NRK99_RS01835 PF00899 ThiF family NRK99_RS01845 PF05690 Thiazole biosynthesis protein ThiG NRK99_RS01850 PF06968 Biotin and Thiamin Synthesis associated domain NRK99_RS01850 PF04055 Radical SAM superfamily NRK99_RS01865 PF13302 Acetyltransferase (GNAT) domain NRK99_RS01875 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS01880 PF13036 Peptidoglycan-synthase activator LpoB NRK99_RS01895 PF17151 Periplasmic sensor domain NRK99_RS01895 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS01905 PF06055 Exopolysaccharide synthesis, ExoD NRK99_RS01920 PF08803 Putative mono-oxygenase ydhR NRK99_RS01925 PF01638 HxlR-like helix-turn-helix NRK99_RS01930 PF00583 Acetyltransferase (GNAT) family NRK99_RS01930 PF13508 Acetyltransferase (GNAT) domain NRK99_RS01950 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS01950 PF00593 TonB dependent receptor NRK99_RS01965 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NRK99_RS01970 PF03692 Putative zinc- or iron-chelating domain NRK99_RS01980 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NRK99_RS01985 PF02602 Uroporphyrinogen-III synthase HemD NRK99_RS01990 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NRK99_RS01990 PF03900 Porphobilinogen deaminase, C-terminal domain NRK99_RS01995 PF12633 Adenylate cyclase NT domain NRK99_RS01995 PF01295 Adenylate cyclase, class-I NRK99_RS02000 PF02230 Phospholipase/Carboxylesterase NRK99_RS02005 PF01491 Frataxin-like domain NRK99_RS02015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRK99_RS02015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRK99_RS02020 PF01678 Diaminopimelate epimerase NRK99_RS02030 PF02899 Phage integrase, N-terminal SAM-like domain NRK99_RS02030 PF00589 Phage integrase family NRK99_RS02035 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS02045 PF00027 Cyclic nucleotide-binding domain NRK99_RS02045 PF13545 Crp-like helix-turn-helix domain NRK99_RS02055 PF07722 Peptidase C26 NRK99_RS02075 PF00005 ABC transporter NRK99_RS02085 PF02464 Competence-damaged protein NRK99_RS02085 PF00994 Probable molybdopterin binding domain NRK99_RS02090 PF00013 KH domain NRK99_RS02090 PF12072 Domain of unknown function (DUF3552) NRK99_RS02090 PF01966 HD domain NRK99_RS02095 PF04204 Homoserine O-succinyltransferase NRK99_RS02105 PF01037 Lrp/AsnC ligand binding domain NRK99_RS02110 PF00884 Sulfatase NRK99_RS02125 PF16657 Maltogenic Amylase, C-terminal domain NRK99_RS02125 PF02903 Alpha amylase, N-terminal ig-like domain NRK99_RS02125 PF00128 Alpha amylase, catalytic domain NRK99_RS02130 PF02308 MgtC family NRK99_RS02150 PF00106 short chain dehydrogenase NRK99_RS02155 PF03577 Peptidase family C69 NRK99_RS02165 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS02175 PF01053 Cys/Met metabolism PLP-dependent enzyme NRK99_RS02185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS02185 PF12793 Sugar transport-related sRNA regulator N-term NRK99_RS02200 PF03280 Proteobacterial lipase chaperone protein NRK99_RS02205 PF00561 alpha/beta hydrolase fold NRK99_RS02215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRK99_RS02215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRK99_RS02220 PF02698 DUF218 domain NRK99_RS02225 PF01752 Collagenase NRK99_RS02225 PF08453 Peptidase family M9 N-terminal NRK99_RS02235 PF00419 Fimbrial protein NRK99_RS02245 PF13953 PapC C-terminal domain NRK99_RS02245 PF00577 Outer membrane usher protein NRK99_RS02245 PF13954 PapC N-terminal domain NRK99_RS02250 PF02753 Pili assembly chaperone PapD, C-terminal domain NRK99_RS02250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NRK99_RS02255 PF00419 Fimbrial protein NRK99_RS02260 PF00419 Fimbrial protein NRK99_RS02265 PF00072 Response regulator receiver domain NRK99_RS02265 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS02270 PF00501 AMP-binding enzyme NRK99_RS02275 PF13378 Enolase C-terminal domain-like NRK99_RS02280 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS02285 PF12697 Alpha/beta hydrolase family NRK99_RS02290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS02290 PF16582 Middle domain of thiamine pyrophosphate NRK99_RS02290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRK99_RS02295 PF00425 chorismate binding enzyme NRK99_RS02300 PF01040 UbiA prenyltransferase family NRK99_RS02330 PF03880 DbpA RNA binding domain NRK99_RS02330 PF00270 DEAD/DEAH box helicase NRK99_RS02330 PF00271 Helicase conserved C-terminal domain NRK99_RS02335 PF07670 Nucleoside recognition NRK99_RS02335 PF07662 Na+ dependent nucleoside transporter C-terminus NRK99_RS02335 PF01773 Na+ dependent nucleoside transporter N-terminus NRK99_RS02340 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRK99_RS02355 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NRK99_RS02360 PF01544 CorA-like Mg2+ transporter protein NRK99_RS02380 PF02080 TrkA-C domain NRK99_RS02380 PF00999 Sodium/hydrogen exchanger family NRK99_RS02380 PF03471 Transporter associated domain NRK99_RS02385 PF05068 Mannitol repressor NRK99_RS02390 PF01232 Mannitol dehydrogenase Rossmann domain NRK99_RS02390 PF08125 Mannitol dehydrogenase C-terminal domain NRK99_RS02395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS02395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRK99_RS02395 PF02378 Phosphotransferase system, EIIC NRK99_RS02405 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS02410 PF08206 Ribonuclease B OB domain NRK99_RS02410 PF00773 RNB domain NRK99_RS02410 PF17876 Cold shock domain NRK99_RS02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS02415 PF03466 LysR substrate binding domain NRK99_RS02420 PF00765 Autoinducer synthase NRK99_RS02425 PF03472 Autoinducer binding domain NRK99_RS02425 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS02430 PF01810 LysE type translocator NRK99_RS02435 PF00149 Calcineurin-like phosphoesterase NRK99_RS02435 PF02872 5'-nucleotidase, C-terminal domain NRK99_RS02440 PF05433 Glycine zipper 2TM domain NRK99_RS02445 PF00583 Acetyltransferase (GNAT) family NRK99_RS02455 PF01321 Creatinase/Prolidase N-terminal domain NRK99_RS02455 PF00557 Metallopeptidase family M24 NRK99_RS02460 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS02465 PF01293 Phosphoenolpyruvate carboxykinase NRK99_RS02470 PF01430 Hsp33 protein NRK99_RS02475 PF01479 S4 domain NRK99_RS02480 PF11356 Type II secretion system protein C NRK99_RS02485 PF00263 Bacterial type II and III secretion system protein NRK99_RS02485 PF03958 Bacterial type II/III secretion system short domain NRK99_RS02490 PF00437 Type II/IV secretion system protein NRK99_RS02495 PF00482 Type II secretion system (T2SS), protein F NRK99_RS02500 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS02500 PF08334 Type II secretion system (T2SS), protein G NRK99_RS02505 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS02505 PF12019 Type II transport protein GspH NRK99_RS02510 PF02501 Type II secretion system (T2SS), protein I NRK99_RS02510 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS02515 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS02515 PF11612 Type II secretion system (T2SS), protein J NRK99_RS02520 PF03934 Type II secretion system (T2SS), protein K NRK99_RS02525 PF12693 GspL periplasmic domain NRK99_RS02525 PF05134 Type II secretion system (T2SS), protein L NRK99_RS02530 PF04612 Type II secretion system (T2SS), protein M NRK99_RS02535 PF01203 Type II secretion system (T2SS), protein N NRK99_RS02540 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS02545 PF01479 S4 domain NRK99_RS02545 PF00579 tRNA synthetases class I (W and Y) NRK99_RS02550 PF03466 LysR substrate binding domain NRK99_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS02555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRK99_RS02560 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS02565 PF00293 NUDIX domain NRK99_RS02570 PF00459 Inositol monophosphatase family NRK99_RS02575 PF03222 Tryptophan/tyrosine permease family NRK99_RS02580 PF01588 Putative tRNA binding domain NRK99_RS02585 PF06445 GyrI-like small molecule binding domain NRK99_RS02585 PF12833 Helix-turn-helix domain NRK99_RS02590 PF01340 Met Apo-repressor, MetJ NRK99_RS02595 PF01053 Cys/Met metabolism PLP-dependent enzyme NRK99_RS02600 PF03447 Homoserine dehydrogenase, NAD binding domain NRK99_RS02600 PF00742 Homoserine dehydrogenase NRK99_RS02600 PF00696 Amino acid kinase family NRK99_RS02605 PF00311 Phosphoenolpyruvate carboxylase NRK99_RS02610 PF01546 Peptidase family M20/M25/M40 NRK99_RS02610 PF07687 Peptidase dimerisation domain NRK99_RS02615 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRK99_RS02615 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRK99_RS02620 PF00696 Amino acid kinase family NRK99_RS02625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRK99_RS02625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRK99_RS02630 PF00764 Arginosuccinate synthase NRK99_RS02635 PF00206 Lyase NRK99_RS02635 PF14698 Argininosuccinate lyase C-terminal NRK99_RS02660 PF12464 Maltose acetyltransferase NRK99_RS02660 PF14602 Hexapeptide repeat of succinyl-transferase NRK99_RS02665 PF13194 Domain of unknown function (DUF4010) NRK99_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS02690 PF00005 ABC transporter NRK99_RS02690 PF12857 TOBE-like domain NRK99_RS02695 PF03466 LysR substrate binding domain NRK99_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS02700 PF18416 N-acetylglucosamine binding protein domain 2 NRK99_RS02700 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRK99_RS02705 PF17200 Single Cache domain 2 NRK99_RS02705 PF00672 HAMP domain NRK99_RS02705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS02735 PF07676 WD40-like Beta Propeller Repeat NRK99_RS02735 PF14685 Tricorn protease PDZ domain NRK99_RS02735 PF14684 Tricorn protease C1 domain NRK99_RS02735 PF03572 Peptidase family S41 NRK99_RS02755 PF11230 Protein of unknown function (DUF3029) NRK99_RS02760 PF04055 Radical SAM superfamily NRK99_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS02770 PF03466 LysR substrate binding domain NRK99_RS02775 PF00155 Aminotransferase class I and II NRK99_RS02780 PF02583 Metal-sensitive transcriptional repressor NRK99_RS02795 PF11852 Domain of unknown function (DUF3372) NRK99_RS02795 PF03714 Bacterial pullanase-associated domain NRK99_RS02795 PF18494 Pullulanase Ins domain NRK99_RS02795 PF17967 Pullulanase N2 domain NRK99_RS02795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRK99_RS02800 PF00403 Heavy-metal-associated domain NRK99_RS02805 PF08534 Redoxin NRK99_RS02815 PF00271 Helicase conserved C-terminal domain NRK99_RS02815 PF00270 DEAD/DEAH box helicase NRK99_RS02830 PF03372 Endonuclease/Exonuclease/phosphatase family NRK99_RS02845 PF06062 Uncharacterised protein family (UPF0231) NRK99_RS02850 PF13556 PucR C-terminal helix-turn-helix domain NRK99_RS02850 PF05651 Putative sugar diacid recognition NRK99_RS02850 PF17853 GGDEF-like domain NRK99_RS02855 PF02447 GntP family permease NRK99_RS02860 PF02595 Glycerate kinase family NRK99_RS02870 PF00255 Glutathione peroxidase NRK99_RS02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS02875 PF03466 LysR substrate binding domain NRK99_RS02880 PF07670 Nucleoside recognition NRK99_RS02880 PF07662 Na+ dependent nucleoside transporter C-terminus NRK99_RS02880 PF01773 Na+ dependent nucleoside transporter N-terminus NRK99_RS02885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRK99_RS02885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRK99_RS02890 PF00472 RF-1 domain NRK99_RS02895 PF00543 Nitrogen regulatory protein P-II NRK99_RS02900 PF13416 Bacterial extracellular solute-binding protein NRK99_RS02910 PF00005 ABC transporter NRK99_RS02910 PF08402 TOBE domain NRK99_RS02915 PF04261 Dyp-type peroxidase family NRK99_RS02920 PF01316 Arginine repressor, DNA binding domain NRK99_RS02920 PF02863 Arginine repressor, C-terminal domain NRK99_RS02925 PF00005 ABC transporter NRK99_RS02930 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS02935 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS02940 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS02945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NRK99_RS02945 PF00056 lactate/malate dehydrogenase, NAD binding domain NRK99_RS02950 PF08238 Sel1 repeat NRK99_RS02955 PF00970 Oxidoreductase FAD-binding domain NRK99_RS02955 PF00042 Globin NRK99_RS02955 PF00175 Oxidoreductase NAD-binding domain NRK99_RS02960 PF02082 Transcriptional regulator NRK99_RS02965 PF00571 CBS domain NRK99_RS02965 PF03471 Transporter associated domain NRK99_RS02965 PF01595 Cyclin M transmembrane N-terminal domain NRK99_RS02970 PF01578 Cytochrome C assembly protein NRK99_RS02975 PF02978 Signal peptide binding domain NRK99_RS02975 PF02881 SRP54-type protein, helical bundle domain NRK99_RS02975 PF00448 SRP54-type protein, GTPase domain NRK99_RS02980 PF00886 Ribosomal protein S16 NRK99_RS02985 PF05239 PRC-barrel domain NRK99_RS02985 PF01782 RimM N-terminal domain NRK99_RS02990 PF01746 tRNA (Guanine-1)-methyltransferase NRK99_RS02995 PF01245 Ribosomal protein L19 NRK99_RS03005 PF02976 DNA mismatch repair enzyme MutH NRK99_RS03010 PF00293 NUDIX domain NRK99_RS03015 PF01590 GAF domain NRK99_RS03015 PF05524 PEP-utilising enzyme, N-terminal NRK99_RS03015 PF00391 PEP-utilising enzyme, mobile domain NRK99_RS03015 PF02896 PEP-utilising enzyme, TIM barrel domain NRK99_RS03020 PF01790 Prolipoprotein diacylglyceryl transferase NRK99_RS03025 PF00303 Thymidylate synthase NRK99_RS03030 PF06965 Na+/H+ antiporter 1 NRK99_RS03070 PF17482 Phage tail sheath C-terminal domain NRK99_RS03070 PF04984 Phage tail sheath protein subtilisin-like domain NRK99_RS03245 PF00145 C-5 cytosine-specific DNA methylase NRK99_RS03310 PF06892 Phage regulatory protein CII (CP76) NRK99_RS03340 PF02899 Phage integrase, N-terminal SAM-like domain NRK99_RS03340 PF00589 Phage integrase family NRK99_RS03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS03345 PF03466 LysR substrate binding domain NRK99_RS03350 PF01022 Bacterial regulatory protein, arsR family NRK99_RS03355 PF01649 Ribosomal protein S20 NRK99_RS03360 PF03023 Lipid II flippase MurJ NRK99_RS03365 PF06574 FAD synthetase NRK99_RS03365 PF01687 Riboflavin kinase NRK99_RS03370 PF06827 Zinc finger found in FPG and IleRS NRK99_RS03370 PF00133 tRNA synthetases class I (I, L, M and V) NRK99_RS03370 PF08264 Anticodon-binding domain of tRNA NRK99_RS03375 PF01252 Signal peptidase (SPase) II NRK99_RS03380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS03385 PF02401 LytB protein NRK99_RS03390 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS03390 PF12019 Type II transport protein GspH NRK99_RS03410 PF05567 Neisseria PilC beta-propeller domain NRK99_RS03415 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NRK99_RS03415 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS03445 PF00795 Carbon-nitrogen hydrolase NRK99_RS03445 PF02540 NAD synthase NRK99_RS03450 PF00543 Nitrogen regulatory protein P-II NRK99_RS03460 PF02664 S-Ribosylhomocysteinase (LuxS) NRK99_RS03465 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS03470 PF17876 Cold shock domain NRK99_RS03470 PF08461 Ribonuclease R winged-helix domain NRK99_RS03470 PF08206 Ribonuclease B OB domain NRK99_RS03470 PF00773 RNB domain NRK99_RS03470 PF00575 S1 RNA binding domain NRK99_RS03500 PF00588 SpoU rRNA Methylase family NRK99_RS03500 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRK99_RS03515 PF13673 Acetyltransferase (GNAT) domain NRK99_RS03520 PF00892 EamA-like transporter family NRK99_RS03540 PF07690 Major Facilitator Superfamily NRK99_RS03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS03550 PF03466 LysR substrate binding domain NRK99_RS03560 PF01566 Natural resistance-associated macrophage protein NRK99_RS03565 PF01250 Ribosomal protein S6 NRK99_RS03570 PF01084 Ribosomal protein S18 NRK99_RS03575 PF03948 Ribosomal protein L9, C-terminal domain NRK99_RS03575 PF01281 Ribosomal protein L9, N-terminal domain NRK99_RS03580 PF00970 Oxidoreductase FAD-binding domain NRK99_RS03580 PF00175 Oxidoreductase NAD-binding domain NRK99_RS03605 PF00698 Acyl transferase domain NRK99_RS03605 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS03605 PF08990 Erythronolide synthase docking NRK99_RS03605 PF16197 Ketoacyl-synthetase C-terminal extension NRK99_RS03605 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS03605 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS03605 PF08659 KR domain NRK99_RS03605 PF00550 Phosphopantetheine attachment site NRK99_RS03605 PF14765 Polyketide synthase dehydratase NRK99_RS03610 PF09335 SNARE associated Golgi protein NRK99_RS03615 PF05193 Peptidase M16 inactive domain NRK99_RS03615 PF00675 Insulinase (Peptidase family M16) NRK99_RS03620 PF04262 Glutamate-cysteine ligase NRK99_RS03625 PF00501 AMP-binding enzyme NRK99_RS03635 PF00583 Acetyltransferase (GNAT) family NRK99_RS03645 PF07728 AAA domain (dynein-related subfamily) NRK99_RS03645 PF12592 Protein of unknown function (DUF3763) NRK99_RS03645 PF17868 AAA lid domain NRK99_RS03650 PF05762 VWA domain containing CoxE-like protein NRK99_RS03660 PF01037 Lrp/AsnC ligand binding domain NRK99_RS03665 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS03665 PF13426 PAS domain NRK99_RS03665 PF00563 EAL domain NRK99_RS03670 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS03670 PF00072 Response regulator receiver domain NRK99_RS03675 PF00009 Elongation factor Tu GTP binding domain NRK99_RS03675 PF03144 Elongation factor Tu domain 2 NRK99_RS03675 PF16658 Class II release factor RF3, C-terminal domain NRK99_RS03685 PF00583 Acetyltransferase (GNAT) family NRK99_RS03690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRK99_RS03700 PF04480 Protein of unknown function (DUF559) NRK99_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS03705 PF03466 LysR substrate binding domain NRK99_RS03710 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRK99_RS03715 PF01425 Amidase NRK99_RS03725 PF00753 Metallo-beta-lactamase superfamily NRK99_RS03735 PF02627 Carboxymuconolactone decarboxylase family NRK99_RS03740 PF02525 Flavodoxin-like fold NRK99_RS03750 PF00271 Helicase conserved C-terminal domain NRK99_RS03750 PF00270 DEAD/DEAH box helicase NRK99_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS03755 PF03466 LysR substrate binding domain NRK99_RS03770 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NRK99_RS03785 PF00445 Ribonuclease T2 family NRK99_RS03795 PF03060 Nitronate monooxygenase NRK99_RS03825 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NRK99_RS03825 PF00293 NUDIX domain NRK99_RS03825 PF09297 NADH pyrophosphatase zinc ribbon domain NRK99_RS03830 PF00672 HAMP domain NRK99_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS03830 PF16527 Two-component sensor protein CpxA, periplasmic domain NRK99_RS03830 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS03835 PF00072 Response regulator receiver domain NRK99_RS03835 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS03840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS03845 PF00005 ABC transporter NRK99_RS03845 PF12704 MacB-like periplasmic core domain NRK99_RS03845 PF02687 FtsX-like permease family NRK99_RS03850 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS03855 PF00005 ABC transporter NRK99_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS03875 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS03880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRK99_RS03880 PF00326 Prolyl oligopeptidase family NRK99_RS03885 PF05170 AsmA family NRK99_RS03900 PF08335 GlnD PII-uridylyltransferase NRK99_RS03900 PF03710 Glutamate-ammonia ligase adenylyltransferase NRK99_RS03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS03910 PF02743 Cache domain NRK99_RS03910 PF00672 HAMP domain NRK99_RS03915 PF00520 Ion transport protein NRK99_RS03915 PF00027 Cyclic nucleotide-binding domain NRK99_RS03920 PF08239 Bacterial SH3 domain NRK99_RS03925 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NRK99_RS03925 PF14850 DNA-binding domain of Proline dehydrogenase NRK99_RS03925 PF01619 Proline dehydrogenase NRK99_RS03925 PF00171 Aldehyde dehydrogenase family NRK99_RS03930 PF00293 NUDIX domain NRK99_RS03930 PF09297 NADH pyrophosphatase zinc ribbon domain NRK99_RS03935 PF01208 Uroporphyrinogen decarboxylase (URO-D) NRK99_RS03940 PF00480 ROK family NRK99_RS03945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRK99_RS03945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRK99_RS03950 PF00162 Phosphoglycerate kinase NRK99_RS03955 PF01116 Fructose-bisphosphate aldolase class-II NRK99_RS03960 PF01266 FAD dependent oxidoreductase NRK99_RS03980 PF02683 Cytochrome C biogenesis protein transmembrane region NRK99_RS03980 PF11412 Disulphide bond corrector protein DsbC NRK99_RS03985 PF03091 CutA1 divalent ion tolerance protein NRK99_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS04000 PF03466 LysR substrate binding domain NRK99_RS04005 PF01571 Aminomethyltransferase folate-binding domain NRK99_RS04010 PF03937 Flavinator of succinate dehydrogenase NRK99_RS04020 PF02910 Fumarate reductase flavoprotein C-term NRK99_RS04020 PF00890 FAD binding domain NRK99_RS04025 PF04542 Sigma-70 region 2 NRK99_RS04025 PF08281 Sigma-70, region 4 NRK99_RS04030 PF03872 Anti sigma-E protein RseA, N-terminal domain NRK99_RS04030 PF03873 Anti sigma-E protein RseA, C-terminal domain NRK99_RS04035 PF03888 MucB/RseB N-terminal domain NRK99_RS04035 PF17188 MucB/RseB C-terminal domain NRK99_RS04045 PF06421 GTP-binding protein LepA C-terminus NRK99_RS04045 PF03144 Elongation factor Tu domain 2 NRK99_RS04045 PF00679 Elongation factor G C-terminus NRK99_RS04045 PF00009 Elongation factor Tu GTP binding domain NRK99_RS04050 PF10502 Signal peptidase, peptidase S26 NRK99_RS04055 PF14622 Ribonuclease-III-like NRK99_RS04055 PF00035 Double-stranded RNA binding motif NRK99_RS04060 PF07650 KH domain NRK99_RS04060 PF01926 50S ribosome-binding GTPase NRK99_RS04065 PF02565 Recombination protein O C terminal NRK99_RS04065 PF11967 Recombination protein O N terminal NRK99_RS04070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NRK99_RS04080 PF01116 Fructose-bisphosphate aldolase class-II NRK99_RS04085 PF01979 Amidohydrolase family NRK99_RS04090 PF03610 PTS system fructose IIA component NRK99_RS04095 PF03613 PTS system mannose/fructose/sorbose family IID component NRK99_RS04100 PF03609 PTS system sorbose-specific iic component NRK99_RS04105 PF03830 PTS system sorbose subfamily IIB component NRK99_RS04110 PF01380 SIS domain NRK99_RS04115 PF08013 Tagatose 6 phosphate kinase NRK99_RS04120 PF00455 DeoR C terminal sensor domain NRK99_RS04120 PF08220 DeoR-like helix-turn-helix domain NRK99_RS04125 PF01510 N-acetylmuramoyl-L-alanine amidase NRK99_RS04130 PF07308 Protein of unknown function (DUF1456) NRK99_RS04135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS04135 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS04135 PF01627 Hpt domain NRK99_RS04135 PF00072 Response regulator receiver domain NRK99_RS04135 PF00672 HAMP domain NRK99_RS04140 PF01938 TRAM domain NRK99_RS04140 PF05958 tRNA (Uracil-5-)-methyltransferase NRK99_RS04145 PF02824 TGS domain NRK99_RS04145 PF13291 ACT domain NRK99_RS04145 PF04607 Region found in RelA / SpoT proteins NRK99_RS04150 PF03819 MazG nucleotide pyrophosphohydrolase domain NRK99_RS04155 PF00117 Glutamine amidotransferase class-I NRK99_RS04155 PF06418 CTP synthase N-terminus NRK99_RS04160 PF00113 Enolase, C-terminal TIM barrel domain NRK99_RS04160 PF03952 Enolase, N-terminal domain NRK99_RS04165 PF04977 Septum formation initiator NRK99_RS04170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NRK99_RS04175 PF02542 YgbB family NRK99_RS04180 PF01142 tRNA pseudouridine synthase D (TruD) NRK99_RS04185 PF01975 Survival protein SurE NRK99_RS04195 PF09335 SNARE associated Golgi protein NRK99_RS04200 PF01476 LysM domain NRK99_RS04200 PF01551 Peptidase family M23 NRK99_RS04205 PF04542 Sigma-70 region 2 NRK99_RS04205 PF00140 Sigma-70 factor, region 1.2 NRK99_RS04205 PF04545 Sigma-70, region 4 NRK99_RS04205 PF04539 Sigma-70 region 3 NRK99_RS04210 PF00814 Glycoprotease family NRK99_RS04215 PF01165 Ribosomal protein S21 NRK99_RS04220 PF09424 Yqey-like protein NRK99_RS04225 PF08275 DNA primase catalytic core, N-terminal domain NRK99_RS04225 PF10410 DnaB-helicase binding domain of primase NRK99_RS04225 PF08278 DNA primase DnaG DnaB-binding NRK99_RS04225 PF01807 CHC2 zinc finger NRK99_RS04230 PF04546 Sigma-70, non-essential region NRK99_RS04230 PF03979 Sigma-70 factor, region 1.1 NRK99_RS04230 PF00140 Sigma-70 factor, region 1.2 NRK99_RS04230 PF04545 Sigma-70, region 4 NRK99_RS04230 PF04539 Sigma-70 region 3 NRK99_RS04230 PF04542 Sigma-70 region 2 NRK99_RS04250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NRK99_RS04250 PF02844 Phosphoribosylglycinamide synthetase, N domain NRK99_RS04250 PF02843 Phosphoribosylglycinamide synthetase, C domain NRK99_RS04255 PF01808 AICARFT/IMPCHase bienzyme NRK99_RS04255 PF02142 MGS-like domain NRK99_RS04260 PF13411 MerR HTH family regulatory protein NRK99_RS04270 PF03889 Alternative ribosome-rescue factor A NRK99_RS04275 PF06969 HemN C-terminal domain NRK99_RS04275 PF04055 Radical SAM superfamily NRK99_RS04280 PF01725 Ham1 family NRK99_RS04285 PF07690 Major Facilitator Superfamily NRK99_RS04290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRK99_RS04290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRK99_RS04300 PF13302 Acetyltransferase (GNAT) domain NRK99_RS04305 PF13302 Acetyltransferase (GNAT) domain NRK99_RS04310 PF01447 Thermolysin metallopeptidase, catalytic domain NRK99_RS04310 PF03413 Peptidase propeptide and YPEB domain NRK99_RS04310 PF04151 Bacterial pre-peptidase C-terminal domain NRK99_RS04310 PF02868 Thermolysin metallopeptidase, alpha-helical domain NRK99_RS04310 PF07504 Fungalysin/Thermolysin Propeptide Motif NRK99_RS04315 PF03466 LysR substrate binding domain NRK99_RS04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS04320 PF07690 Major Facilitator Superfamily NRK99_RS04325 PF00267 Gram-negative porin NRK99_RS04330 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRK99_RS04335 PF10415 Fumarase C C-terminus NRK99_RS04335 PF00206 Lyase NRK99_RS04340 PF04186 FxsA cytoplasmic membrane protein NRK99_RS04345 PF01554 MatE NRK99_RS04350 PF00166 Chaperonin 10 Kd subunit NRK99_RS04355 PF00118 TCP-1/cpn60 chaperonin family NRK99_RS04365 PF00563 EAL domain NRK99_RS04365 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS04365 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS04365 PF13188 PAS domain NRK99_RS04375 PF00849 RNA pseudouridylate synthase NRK99_RS04380 PF12137 RNA polymerase recycling family C-terminal NRK99_RS04380 PF18337 RapA N-terminal Tudor like domain NRK99_RS04380 PF00176 SNF2 family N-terminal domain NRK99_RS04380 PF00271 Helicase conserved C-terminal domain NRK99_RS04380 PF18339 RapA N-terminal Tudor like domain 1 NRK99_RS04410 PF00317 Ribonucleotide reductase, all-alpha domain NRK99_RS04410 PF02867 Ribonucleotide reductase, barrel domain NRK99_RS04410 PF08343 Ribonucleotide reductase N-terminal NRK99_RS04420 PF02562 PhoH-like protein NRK99_RS04420 PF13638 PIN domain NRK99_RS04430 PF00005 ABC transporter NRK99_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS04455 PF00694 Aconitase C-terminal domain NRK99_RS04460 PF00330 Aconitase family (aconitate hydratase) NRK99_RS04465 PF00180 Isocitrate/isopropylmalate dehydrogenase NRK99_RS04470 PF08502 LeuA allosteric (dimerisation) domain NRK99_RS04470 PF00682 HMGL-like NRK99_RS04480 PF01569 PAP2 superfamily NRK99_RS04495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS04495 PF00205 Thiamine pyrophosphate enzyme, central domain NRK99_RS04495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRK99_RS04500 PF10369 Small subunit of acetolactate synthase NRK99_RS04505 PF07085 DRTGG domain NRK99_RS04505 PF01515 Phosphate acetyl/butaryl transferase NRK99_RS04510 PF00871 Acetokinase family NRK99_RS04515 PF04217 Protein of unknown function, DUF412 NRK99_RS04520 PF03887 YfbU domain NRK99_RS04525 PF00578 AhpC/TSA family NRK99_RS04530 PF01842 ACT domain NRK99_RS04535 PF00701 Dihydrodipicolinate synthetase family NRK99_RS04540 PF06804 NlpB/DapX lipoprotein NRK99_RS04545 PF01259 SAICAR synthetase NRK99_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS04555 PF03466 LysR substrate binding domain NRK99_RS04560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NRK99_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS04580 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS04580 PF18415 Histidine kinase receptor ArcB trans-membrane domain NRK99_RS04580 PF01627 Hpt domain NRK99_RS04580 PF00989 PAS fold NRK99_RS04580 PF00072 Response regulator receiver domain NRK99_RS04585 PF13286 Phosphohydrolase-associated domain NRK99_RS04585 PF01966 HD domain NRK99_RS04595 PF09456 RcsC Alpha-Beta-Loop (ABL) NRK99_RS04595 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS04595 PF00072 Response regulator receiver domain NRK99_RS04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS04600 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS04600 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS04600 PF00563 EAL domain NRK99_RS04605 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS04605 PF00672 HAMP domain NRK99_RS04605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS04610 PF02357 Transcription termination factor nusG NRK99_RS04615 PF03180 NLPA lipoprotein NRK99_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS04625 PF09383 NIL domain NRK99_RS04625 PF00005 ABC transporter NRK99_RS04635 PF00480 ROK family NRK99_RS04640 PF08331 Domain of unknown function (DUF1730) NRK99_RS04645 PF01256 Carbohydrate kinase NRK99_RS04645 PF03853 YjeF-related protein N-terminus NRK99_RS04650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NRK99_RS04655 PF01520 N-acetylmuramoyl-L-alanine amidase NRK99_RS04660 PF01119 DNA mismatch repair protein, C-terminal domain NRK99_RS04660 PF08676 MutL C terminal dimerisation domain NRK99_RS04670 PF17209 Hfq protein NRK99_RS04675 PF16360 GTP-binding GTPase Middle Region NRK99_RS04675 PF13167 GTP-binding GTPase N-terminal NRK99_RS04675 PF01926 50S ribosome-binding GTPase NRK99_RS04680 PF01145 SPFH domain / Band 7 family NRK99_RS04680 PF12221 Bacterial membrane protein N terminal NRK99_RS04685 PF01145 SPFH domain / Band 7 family NRK99_RS04690 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NRK99_RS04695 PF00348 Polyprenyl synthetase NRK99_RS04700 PF00829 Ribosomal prokaryotic L21 protein NRK99_RS04705 PF01016 Ribosomal L27 protein NRK99_RS04710 PF01926 50S ribosome-binding GTPase NRK99_RS04710 PF01018 GTP1/OBG NRK99_RS04715 PF07670 Nucleoside recognition NRK99_RS04720 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS04720 PF00501 AMP-binding enzyme NRK99_RS04740 PF00296 Luciferase-like monooxygenase NRK99_RS04750 PF00149 Calcineurin-like phosphoesterase NRK99_RS04755 PF04379 ApaG domain NRK99_RS04760 PF00398 Ribosomal RNA adenine dimethylase NRK99_RS04765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NRK99_RS04770 PF09312 SurA N-terminal domain NRK99_RS04770 PF00639 PPIC-type PPIASE domain NRK99_RS04775 PF03968 OstA-like protein NRK99_RS04775 PF04453 LPS transport system D NRK99_RS04780 PF01636 Phosphotransferase enzyme family NRK99_RS04785 PF00483 Nucleotidyl transferase NRK99_RS04790 PF00226 DnaJ domain NRK99_RS04790 PF05099 Tellurite resistance protein TerB NRK99_RS04795 PF00860 Permease family NRK99_RS04805 PF12848 ABC transporter NRK99_RS04805 PF00005 ABC transporter NRK99_RS04820 PF01048 Phosphorylase superfamily NRK99_RS04825 PF01464 Transglycosylase SLT domain NRK99_RS04835 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS04850 PF00005 ABC transporter NRK99_RS04855 PF01032 FecCD transport family NRK99_RS04865 PF06228 Haem utilisation ChuX/HutX NRK99_RS04870 PF01243 Pyridoxamine 5'-phosphate oxidase NRK99_RS04890 PF00593 TonB dependent receptor NRK99_RS04890 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS04895 PF12832 MFS_1 like family NRK99_RS04905 PF13443 Cro/C1-type HTH DNA-binding domain NRK99_RS04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS04915 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS04915 PF00989 PAS fold NRK99_RS04920 PF00704 Glycosyl hydrolases family 18 NRK99_RS04920 PF08329 Chitinase A, N-terminal domain NRK99_RS04925 PF12561 ToxR activated gene A lipoprotein domain NRK99_RS04925 PF17945 Beta/Gamma crystallin NRK99_RS04930 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRK99_RS04930 PF18416 N-acetylglucosamine binding protein domain 2 NRK99_RS04935 PF08241 Methyltransferase domain NRK99_RS04940 PF00027 Cyclic nucleotide-binding domain NRK99_RS04940 PF13545 Crp-like helix-turn-helix domain NRK99_RS04945 PF02566 OsmC-like protein NRK99_RS04960 PF00485 Phosphoribulokinase / Uridine kinase family NRK99_RS04965 PF00893 Small Multidrug Resistance protein NRK99_RS04970 PF00892 EamA-like transporter family NRK99_RS04975 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NRK99_RS04980 PF01522 Polysaccharide deacetylase NRK99_RS04985 PF02911 Formyl transferase, C-terminal domain NRK99_RS04985 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS04985 PF00551 Formyl transferase NRK99_RS04990 PF00535 Glycosyl transferase family 2 NRK99_RS04995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRK99_RS05000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRK99_RS05000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRK99_RS05000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRK99_RS05005 PF06794 Uncharacterised protein family (UPF0270) NRK99_RS05010 PF00561 alpha/beta hydrolase fold NRK99_RS05015 PF01584 CheW-like domain NRK99_RS05015 PF00072 Response regulator receiver domain NRK99_RS05025 PF09526 Probable metal-binding protein (DUF2387) NRK99_RS05030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS05035 PF04102 SlyX NRK99_RS05045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS05045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRK99_RS05050 PF00072 Response regulator receiver domain NRK99_RS05050 PF02954 Bacterial regulatory protein, Fis family NRK99_RS05050 PF00158 Sigma-54 interaction domain NRK99_RS05070 PF00149 Calcineurin-like phosphoesterase NRK99_RS05070 PF02872 5'-nucleotidase, C-terminal domain NRK99_RS05075 PF00563 EAL domain NRK99_RS05075 PF12792 CSS motif domain associated with EAL NRK99_RS05085 PF03796 DnaB-like helicase C terminal domain NRK99_RS05085 PF00772 DnaB-like helicase N terminal domain NRK99_RS05090 PF01168 Alanine racemase, N-terminal domain NRK99_RS05090 PF00842 Alanine racemase, C-terminal domain NRK99_RS05095 PF12838 4Fe-4S dicluster domain NRK99_RS05100 PF01136 Peptidase family U32 NRK99_RS05100 PF16325 Peptidase family U32 C-terminal domain NRK99_RS05105 PF00563 EAL domain NRK99_RS05105 PF01590 GAF domain NRK99_RS05105 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS05105 PF00989 PAS fold NRK99_RS05130 PF00266 Aminotransferase class-V NRK99_RS05135 PF01339 CheB methylesterase NRK99_RS05135 PF00072 Response regulator receiver domain NRK99_RS05140 PF03975 CheD chemotactic sensory transduction NRK99_RS05145 PF01739 CheR methyltransferase, SAM binding domain NRK99_RS05145 PF03705 CheR methyltransferase, all-alpha domain NRK99_RS05150 PF00672 HAMP domain NRK99_RS05150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS05155 PF01584 CheW-like domain NRK99_RS05160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS05160 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS05160 PF00672 HAMP domain NRK99_RS05165 PF09078 CheY binding NRK99_RS05165 PF02895 Signal transducing histidine kinase, homodimeric domain NRK99_RS05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS05165 PF01584 CheW-like domain NRK99_RS05165 PF01627 Hpt domain NRK99_RS05175 PF00072 Response regulator receiver domain NRK99_RS05180 PF00672 HAMP domain NRK99_RS05180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS05185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRK99_RS05185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRK99_RS05190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS05190 PF03466 LysR substrate binding domain NRK99_RS05195 PF01810 LysE type translocator NRK99_RS05200 PF12392 Collagenase NRK99_RS05200 PF01136 Peptidase family U32 NRK99_RS05215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRK99_RS05215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRK99_RS05220 PF02805 Metal binding domain of Ada NRK99_RS05220 PF12833 Helix-turn-helix domain NRK99_RS05220 PF00730 HhH-GPD superfamily base excision DNA repair protein NRK99_RS05220 PF06029 AlkA N-terminal domain NRK99_RS05230 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NRK99_RS05255 PF00106 short chain dehydrogenase NRK99_RS05260 PF03573 outer membrane porin, OprD family NRK99_RS05265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS05265 PF00672 HAMP domain NRK99_RS05265 PF02743 Cache domain NRK99_RS05275 PF02447 GntP family permease NRK99_RS05280 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS05285 PF01261 Xylose isomerase-like TIM barrel NRK99_RS05290 PF00596 Class II Aldolase and Adducin N-terminal domain NRK99_RS05295 PF17042 Nucleotide-binding C-terminal domain NRK99_RS05295 PF07005 Sugar-binding N-terminal domain NRK99_RS05300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRK99_RS05300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRK99_RS05305 PF00455 DeoR C terminal sensor domain NRK99_RS05305 PF08220 DeoR-like helix-turn-helix domain NRK99_RS05330 PF00800 Prephenate dehydratase NRK99_RS05330 PF01817 Chorismate mutase type II NRK99_RS05360 PF08349 Protein of unknown function (DUF1722) NRK99_RS05365 PF13411 MerR HTH family regulatory protein NRK99_RS05370 PF00875 DNA photolyase NRK99_RS05370 PF03441 FAD binding domain of DNA photolyase NRK99_RS05380 PF00106 short chain dehydrogenase NRK99_RS05420 PF00210 Ferritin-like domain NRK99_RS05425 PF03063 Prismane/CO dehydrogenase family NRK99_RS05430 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS05430 PF00175 Oxidoreductase NAD-binding domain NRK99_RS05430 PF00970 Oxidoreductase FAD-binding domain NRK99_RS05435 PF16363 GDP-mannose 4,6 dehydratase NRK99_RS05440 PF06965 Na+/H+ antiporter 1 NRK99_RS05440 PF13462 Thioredoxin NRK99_RS05450 PF08479 POTRA domain, ShlB-type NRK99_RS05450 PF17287 POTRA domain NRK99_RS05450 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NRK99_RS05455 PF13332 Hemagglutinin repeat NRK99_RS05455 PF15605 Bacterial toxin 28 NRK99_RS05455 PF04829 Pre-toxin domain with VENN motif NRK99_RS05455 PF04829 Pre-toxin domain with VENN motif NRK99_RS05455 PF15605 Bacterial toxin 28 NRK99_RS05455 PF05860 haemagglutination activity domain NRK99_RS05455 PF05860 haemagglutination activity domain NRK99_RS05455 PF13332 Hemagglutinin repeat NRK99_RS05460 PF18616 CDI immunity proteins NRK99_RS05475 PF03472 Autoinducer binding domain NRK99_RS05475 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS05480 PF05638 Type VI secretion system effector, Hcp NRK99_RS05490 PF04717 Type VI secretion system, phage-baseplate injector NRK99_RS05495 PF13503 Domain of unknown function (DUF4123) NRK99_RS05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS05520 PF03466 LysR substrate binding domain NRK99_RS05525 PF03306 Alpha-acetolactate decarboxylase NRK99_RS05530 PF00205 Thiamine pyrophosphate enzyme, central domain NRK99_RS05530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS05530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRK99_RS05535 PF01965 DJ-1/PfpI family NRK99_RS05540 PF08546 Ketopantoate reductase PanE/ApbA C terminal NRK99_RS05540 PF02558 Ketopantoate reductase PanE/ApbA NRK99_RS05545 PF04461 Protein of unknown function (DUF520) NRK99_RS05550 PF03502 Nucleoside-specific channel-forming protein, Tsx NRK99_RS05555 PF07690 Major Facilitator Superfamily NRK99_RS05565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRK99_RS05575 PF05175 Methyltransferase small domain NRK99_RS05580 PF01722 BolA-like protein NRK99_RS05585 PF11973 NQRA C-terminal domain NRK99_RS05585 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NRK99_RS05590 PF03116 NQR2, RnfD, RnfE family NRK99_RS05595 PF04205 FMN-binding domain NRK99_RS05600 PF02508 Rnf-Nqr subunit, membrane protein NRK99_RS05605 PF02508 Rnf-Nqr subunit, membrane protein NRK99_RS05610 PF00970 Oxidoreductase FAD-binding domain NRK99_RS05610 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS05610 PF00175 Oxidoreductase NAD-binding domain NRK99_RS05615 PF02424 ApbE family NRK99_RS05630 PF11798 IMS family HHH motif NRK99_RS05630 PF11799 impB/mucB/samB family C-terminal domain NRK99_RS05630 PF00817 impB/mucB/samB family NRK99_RS05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS05635 PF00672 HAMP domain NRK99_RS05640 PF03466 LysR substrate binding domain NRK99_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS05650 PF04241 Protein of unknown function (DUF423) NRK99_RS05655 PF01728 FtsJ-like methyltransferase NRK99_RS05655 PF18125 RlmM ferredoxin-like domain NRK99_RS05665 PF00180 Isocitrate/isopropylmalate dehydrogenase NRK99_RS05665 PF18324 Hypothetical protein TT1725 NRK99_RS05670 PF01367 5'-3' exonuclease, C-terminal SAM fold NRK99_RS05670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRK99_RS05675 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NRK99_RS05675 PF03641 Possible lysine decarboxylase NRK99_RS05675 PF11892 Domain of unknown function (DUF3412) NRK99_RS05680 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS05690 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NRK99_RS05690 PF14489 QueF-like protein NRK99_RS05695 PF07348 Syd protein (SUKH-2) NRK99_RS05700 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NRK99_RS05725 PF04287 tRNA pseudouridine synthase C NRK99_RS05730 PF00849 RNA pseudouridylate synthase NRK99_RS05735 PF00258 Flavodoxin NRK99_RS05740 PF02264 LamB porin NRK99_RS05745 PF07148 Maltose operon periplasmic protein precursor (MalM) NRK99_RS05750 PF00367 phosphotransferase system, EIIB NRK99_RS05750 PF02378 Phosphotransferase system, EIIC NRK99_RS05755 PF11944 Protein of unknown function (DUF3461) NRK99_RS05760 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS05760 PF14602 Hexapeptide repeat of succinyl-transferase NRK99_RS05760 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NRK99_RS05765 PF08335 GlnD PII-uridylyltransferase NRK99_RS05765 PF01842 ACT domain NRK99_RS05765 PF01966 HD domain NRK99_RS05765 PF01909 Nucleotidyltransferase domain NRK99_RS05770 PF00557 Metallopeptidase family M24 NRK99_RS05775 PF00318 Ribosomal protein S2 NRK99_RS05780 PF00889 Elongation factor TS NRK99_RS05785 PF00696 Amino acid kinase family NRK99_RS05790 PF01765 Ribosome recycling factor NRK99_RS05795 PF01255 Putative undecaprenyl diphosphate synthase NRK99_RS05805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NRK99_RS05805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NRK99_RS05805 PF13288 DXP reductoisomerase C-terminal domain NRK99_RS05810 PF02163 Peptidase family M50 NRK99_RS05810 PF17820 PDZ domain NRK99_RS05815 PF07244 Surface antigen variable number repeat NRK99_RS05815 PF01103 Surface antigen NRK99_RS05820 PF03938 Outer membrane protein (OmpH-like) NRK99_RS05825 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS05825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NRK99_RS05830 PF07977 FabA-like domain NRK99_RS05835 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS05835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NRK99_RS05840 PF02684 Lipid-A-disaccharide synthetase NRK99_RS05845 PF01351 Ribonuclease HII NRK99_RS05850 PF01336 OB-fold nucleic acid binding domain NRK99_RS05850 PF02811 PHP domain NRK99_RS05850 PF14579 Helix-hairpin-helix motif NRK99_RS05850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRK99_RS05850 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRK99_RS05855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NRK99_RS05860 PF18500 CadC C-terminal domain 1 NRK99_RS05860 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS05865 PF13520 Amino acid permease NRK99_RS05870 PF01276 Orn/Lys/Arg decarboxylase, major domain NRK99_RS05870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NRK99_RS05870 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NRK99_RS05875 PF08543 Phosphomethylpyrimidine kinase NRK99_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS05885 PF03466 LysR substrate binding domain NRK99_RS05895 PF13520 Amino acid permease NRK99_RS05900 PF13302 Acetyltransferase (GNAT) domain NRK99_RS05905 PF12848 ABC transporter NRK99_RS05905 PF00005 ABC transporter NRK99_RS05910 PF00834 Ribulose-phosphate 3 epimerase family NRK99_RS05915 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS05920 PF00579 tRNA synthetases class I (W and Y) NRK99_RS05930 PF00117 Glutamine amidotransferase class-I NRK99_RS05935 PF00202 Aminotransferase class-III NRK99_RS05940 PF04958 Arginine N-succinyltransferase beta subunit NRK99_RS05945 PF00171 Aldehyde dehydrogenase family NRK99_RS05955 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS05960 PF07690 Major Facilitator Superfamily NRK99_RS05965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS05965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRK99_RS05965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRK99_RS05965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRK99_RS05965 PF10371 Domain of unknown function NRK99_RS05985 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS05985 PF00155 Aminotransferase class I and II NRK99_RS05995 PF12848 ABC transporter NRK99_RS05995 PF00005 ABC transporter NRK99_RS06005 PF16657 Maltogenic Amylase, C-terminal domain NRK99_RS06005 PF00128 Alpha amylase, catalytic domain NRK99_RS06015 PF04266 ASCH domain NRK99_RS06025 PF01048 Phosphorylase superfamily NRK99_RS06030 PF04973 Nicotinamide mononucleotide transporter NRK99_RS06035 PF03600 Citrate transporter NRK99_RS06035 PF02080 TrkA-C domain NRK99_RS06075 PF06071 Protein of unknown function (DUF933) NRK99_RS06075 PF01926 50S ribosome-binding GTPase NRK99_RS06080 PF01195 Peptidyl-tRNA hydrolase NRK99_RS06085 PF02872 5'-nucleotidase, C-terminal domain NRK99_RS06085 PF00149 Calcineurin-like phosphoesterase NRK99_RS06090 PF14572 Phosphoribosyl synthetase-associated domain NRK99_RS06090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NRK99_RS06100 PF00288 GHMP kinases N terminal domain NRK99_RS06100 PF08544 GHMP kinases C terminal NRK99_RS06105 PF03550 Outer membrane lipoprotein LolB NRK99_RS06110 PF01488 Shikimate / quinate 5-dehydrogenase NRK99_RS06110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NRK99_RS06110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NRK99_RS06115 PF03462 PCRF domain NRK99_RS06115 PF00472 RF-1 domain NRK99_RS06120 PF13847 Methyltransferase domain NRK99_RS06120 PF17827 PrmC N-terminal domain NRK99_RS06130 PF13369 Transglutaminase-like superfamily NRK99_RS06135 PF00793 DAHP synthetase I family NRK99_RS06140 PF00375 Sodium:dicarboxylate symporter family NRK99_RS06145 PF01228 Glycine radical NRK99_RS06150 PF03167 Uracil DNA glycosylase superfamily NRK99_RS06165 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRK99_RS06170 PF01235 Sodium:alanine symporter family NRK99_RS06175 PF01841 Transglutaminase-like superfamily NRK99_RS06175 PF13559 Domain of unknown function (DUF4129) NRK99_RS06175 PF11992 Domain of unknown function (DUF3488) NRK99_RS06185 PF17863 AAA lid domain NRK99_RS06185 PF07726 ATPase family associated with various cellular activities (AAA) NRK99_RS06190 PF00144 Beta-lactamase NRK99_RS06195 PF00854 POT family NRK99_RS06200 PF03652 Holliday junction resolvase NRK99_RS06205 PF02622 Uncharacterized ACR, COG1678 NRK99_RS06210 PF00672 HAMP domain NRK99_RS06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS06210 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS06215 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NRK99_RS06215 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NRK99_RS06220 PF04452 RNA methyltransferase NRK99_RS06225 PF04231 Endonuclease I NRK99_RS06230 PF10263 SprT-like family NRK99_RS06235 PF02772 S-adenosylmethionine synthetase, central domain NRK99_RS06235 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRK99_RS06235 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRK99_RS06240 PF00456 Transketolase, thiamine diphosphate binding domain NRK99_RS06240 PF02780 Transketolase, C-terminal domain NRK99_RS06240 PF02779 Transketolase, pyrimidine binding domain NRK99_RS06250 PF01042 Endoribonuclease L-PSP NRK99_RS06255 PF03702 Anhydro-N-acetylmuramic acid kinase NRK99_RS06260 PF01476 LysM domain NRK99_RS06260 PF08525 Opacity-associated protein A N-terminal motif NRK99_RS06260 PF01551 Peptidase family M23 NRK99_RS06265 PF00579 tRNA synthetases class I (W and Y) NRK99_RS06270 PF01204 Trehalase NRK99_RS06280 PF01161 Phosphatidylethanolamine-binding protein NRK99_RS06285 PF00709 Adenylosuccinate synthetase NRK99_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS06290 PF03466 LysR substrate binding domain NRK99_RS06300 PF00155 Aminotransferase class I and II NRK99_RS06305 PF07690 Major Facilitator Superfamily NRK99_RS06310 PF03466 LysR substrate binding domain NRK99_RS06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS06315 PF00106 short chain dehydrogenase NRK99_RS06320 PF08496 Peptidase family S49 N-terminal NRK99_RS06320 PF01343 Peptidase family S49 NRK99_RS06325 PF04996 Succinylarginine dihydrolase NRK99_RS06330 PF01396 Topoisomerase DNA binding C4 zinc finger NRK99_RS06330 PF01751 Toprim domain NRK99_RS06330 PF01131 DNA topoisomerase NRK99_RS06330 PF08272 Topoisomerase I zinc-ribbon-like NRK99_RS06345 PF08447 PAS fold NRK99_RS06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS06350 PF00728 Glycosyl hydrolase family 20, catalytic domain NRK99_RS06350 PF02838 Glycosyl hydrolase family 20, domain 2 NRK99_RS06355 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRK99_RS06365 PF00005 ABC transporter NRK99_RS06365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS06370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS06370 PF00005 ABC transporter NRK99_RS06375 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS06380 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS06385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS06390 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS06390 PF09308 LuxQ, periplasmic NRK99_RS06390 PF00072 Response regulator receiver domain NRK99_RS06410 PF10725 Protein of unknown function (DUF2517) NRK99_RS06430 PF05114 Protein of unknown function (DUF692) NRK99_RS06450 PF08447 PAS fold NRK99_RS06450 PF13426 PAS domain NRK99_RS06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS06465 PF04632 Fusaric acid resistance protein family NRK99_RS06470 PF00994 Probable molybdopterin binding domain NRK99_RS06470 PF03454 MoeA C-terminal region (domain IV) NRK99_RS06470 PF03453 MoeA N-terminal region (domain I and II) NRK99_RS06475 PF12804 MobA-like NTP transferase domain NRK99_RS06480 PF00005 ABC transporter NRK99_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS06490 PF12849 PBP superfamily domain NRK99_RS06495 PF02954 Bacterial regulatory protein, Fis family NRK99_RS06495 PF00158 Sigma-54 interaction domain NRK99_RS06495 PF00072 Response regulator receiver domain NRK99_RS06500 PF00989 PAS fold NRK99_RS06500 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS06510 PF02634 FdhD/NarQ family NRK99_RS06550 PF00384 Molybdopterin oxidoreductase NRK99_RS06550 PF12838 4Fe-4S dicluster domain NRK99_RS06550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRK99_RS06550 PF00384 Molybdopterin oxidoreductase NRK99_RS06550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRK99_RS06550 PF12838 4Fe-4S dicluster domain NRK99_RS06550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRK99_RS06550 PF01568 Molydopterin dinucleotide binding domain NRK99_RS06550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRK99_RS06550 PF01568 Molydopterin dinucleotide binding domain NRK99_RS06555 PF13247 4Fe-4S dicluster domain NRK99_RS06565 PF00390 Malic enzyme, N-terminal domain NRK99_RS06565 PF03949 Malic enzyme, NAD binding domain NRK99_RS06580 PF00860 Permease family NRK99_RS06585 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS06590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS06590 PF00672 HAMP domain NRK99_RS06600 PF10282 Lactonase, 7-bladed beta-propeller NRK99_RS06610 PF00924 Mechanosensitive ion channel NRK99_RS06610 PF12795 Mechanosensitive ion channel porin domain NRK99_RS06610 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRK99_RS06615 PF02887 Pyruvate kinase, alpha/beta domain NRK99_RS06615 PF00224 Pyruvate kinase, barrel domain NRK99_RS06625 PF04389 Peptidase family M28 NRK99_RS06625 PF04151 Bacterial pre-peptidase C-terminal domain NRK99_RS06630 PF00999 Sodium/hydrogen exchanger family NRK99_RS06630 PF02254 TrkA-N domain NRK99_RS06640 PF04381 Putative exonuclease, RdgC NRK99_RS06650 PF12320 Type 5 capsule protein repressor C-terminal domain NRK99_RS06650 PF00149 Calcineurin-like phosphoesterase NRK99_RS06665 PF01292 Prokaryotic cytochrome b561 NRK99_RS06670 PF00072 Response regulator receiver domain NRK99_RS06670 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS06675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRK99_RS06680 PF00391 PEP-utilising enzyme, mobile domain NRK99_RS06680 PF05524 PEP-utilising enzyme, N-terminal NRK99_RS06680 PF02896 PEP-utilising enzyme, TIM barrel domain NRK99_RS06685 PF00381 PTS HPr component phosphorylation site NRK99_RS06690 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS06695 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS06695 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS06695 PF17871 AAA lid domain NRK99_RS06695 PF02861 Clp amino terminal domain, pathogenicity island component NRK99_RS06695 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS06705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRK99_RS06705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRK99_RS06710 PF00672 HAMP domain NRK99_RS06710 PF01966 HD domain NRK99_RS06715 PF01980 tRNA-methyltransferase O NRK99_RS06715 PF18389 TrmO C-terminal domain NRK99_RS06735 PF00005 ABC transporter NRK99_RS06735 PF00664 ABC transporter transmembrane region NRK99_RS06740 PF00664 ABC transporter transmembrane region NRK99_RS06740 PF00005 ABC transporter NRK99_RS06755 PF00072 Response regulator receiver domain NRK99_RS06755 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS06765 PF03737 Aldolase/RraA NRK99_RS06780 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NRK99_RS06785 PF00588 SpoU rRNA Methylase family NRK99_RS06790 PF00742 Homoserine dehydrogenase NRK99_RS06790 PF00696 Amino acid kinase family NRK99_RS06790 PF03447 Homoserine dehydrogenase, NAD binding domain NRK99_RS06790 PF01842 ACT domain NRK99_RS06790 PF13840 ACT domain NRK99_RS06795 PF08544 GHMP kinases C terminal NRK99_RS06795 PF00288 GHMP kinases N terminal domain NRK99_RS06800 PF14821 Threonine synthase N terminus NRK99_RS06800 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS06805 PF13474 SnoaL-like domain NRK99_RS06820 PF00005 ABC transporter NRK99_RS06820 PF12848 ABC transporter NRK99_RS06850 PF01048 Phosphorylase superfamily NRK99_RS06870 PF00072 Response regulator receiver domain NRK99_RS06870 PF01627 Hpt domain NRK99_RS06870 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS06870 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS06870 PF00989 PAS fold NRK99_RS06875 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS06875 PF00563 EAL domain NRK99_RS06875 PF00360 Phytochrome region NRK99_RS06875 PF01590 GAF domain NRK99_RS06880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS06880 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS06880 PF00072 Response regulator receiver domain NRK99_RS06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS06880 PF01627 Hpt domain NRK99_RS06880 PF00672 HAMP domain NRK99_RS06885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NRK99_RS06890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS06890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRK99_RS06895 PF02690 Na+/Pi-cotransporter NRK99_RS06905 PF13520 Amino acid permease NRK99_RS06915 PF00324 Amino acid permease NRK99_RS06925 PF00202 Aminotransferase class-III NRK99_RS06930 PF00171 Aldehyde dehydrogenase family NRK99_RS06935 PF07883 Cupin domain NRK99_RS06935 PF01381 Helix-turn-helix NRK99_RS06940 PF01266 FAD dependent oxidoreductase NRK99_RS06955 PF00816 H-NS histone family NRK99_RS06960 PF00793 DAHP synthetase I family NRK99_RS06965 PF04954 Siderophore-interacting protein NRK99_RS06965 PF08021 Siderophore-interacting FAD-binding domain NRK99_RS06970 PF02321 Outer membrane efflux protein NRK99_RS06975 PF00005 ABC transporter NRK99_RS06975 PF02687 FtsX-like permease family NRK99_RS06975 PF12704 MacB-like periplasmic core domain NRK99_RS06980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS06990 PF02833 DHHA2 domain NRK99_RS06990 PF01368 DHH family NRK99_RS06995 PF02463 RecF/RecN/SMC N terminal domain NRK99_RS07000 PF01513 ATP-NAD kinase NRK99_RS07005 PF01025 GrpE NRK99_RS07010 PF00012 Hsp70 protein NRK99_RS07015 PF00226 DnaJ domain NRK99_RS07015 PF01556 DnaJ C terminal domain NRK99_RS07015 PF00684 DnaJ central domain NRK99_RS07020 PF11471 Maltoporin periplasmic N-terminal extension NRK99_RS07020 PF02264 LamB porin NRK99_RS07025 PF00294 pfkB family carbohydrate kinase NRK99_RS07030 PF02378 Phosphotransferase system, EIIC NRK99_RS07030 PF00367 phosphotransferase system, EIIB NRK99_RS07035 PF08244 Glycosyl hydrolases family 32 C terminal NRK99_RS07035 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRK99_RS07040 PF13407 Periplasmic binding protein domain NRK99_RS07040 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS07045 PF02308 MgtC family NRK99_RS07060 PF01022 Bacterial regulatory protein, arsR family NRK99_RS07065 PF04143 Sulphur transport NRK99_RS07080 PF00873 AcrB/AcrD/AcrF family NRK99_RS07085 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS07085 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS07085 PF00563 EAL domain NRK99_RS07090 PF03099 Biotin/lipoate A/B protein ligase family NRK99_RS07090 PF10437 Bacterial lipoate protein ligase C-terminus NRK99_RS07105 PF00873 AcrB/AcrD/AcrF family NRK99_RS07110 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS07110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS07125 PF00873 AcrB/AcrD/AcrF family NRK99_RS07130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS07135 PF03372 Endonuclease/Exonuclease/phosphatase family NRK99_RS07150 PF00011 Hsp20/alpha crystallin family NRK99_RS07160 PF02424 ApbE family NRK99_RS07165 PF00127 Copper binding proteins, plastocyanin/azurin family NRK99_RS07185 PF01156 Inosine-uridine preferring nucleoside hydrolase NRK99_RS07195 PF00034 Cytochrome c NRK99_RS07195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRK99_RS07205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRK99_RS07205 PF06481 COX Aromatic Rich Motif NRK99_RS07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRK99_RS07215 PF00510 Cytochrome c oxidase subunit III NRK99_RS07220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NRK99_RS07225 PF01040 UbiA prenyltransferase family NRK99_RS07230 PF07690 Major Facilitator Superfamily NRK99_RS07240 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRK99_RS07245 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS07250 PF00005 ABC transporter NRK99_RS07255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRK99_RS07265 PF07662 Na+ dependent nucleoside transporter C-terminus NRK99_RS07265 PF01773 Na+ dependent nucleoside transporter N-terminus NRK99_RS07265 PF07670 Nucleoside recognition NRK99_RS07285 PF13657 HipA N-terminal domain NRK99_RS07285 PF07804 HipA-like C-terminal domain NRK99_RS07290 PF01381 Helix-turn-helix NRK99_RS07295 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRK99_RS07305 PF10137 Predicted nucleotide-binding protein containing TIR-like domain NRK99_RS07310 PF00290 Tryptophan synthase alpha chain NRK99_RS07315 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS07320 PF00218 Indole-3-glycerol phosphate synthase NRK99_RS07320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NRK99_RS07325 PF02885 Glycosyl transferase family, helical bundle domain NRK99_RS07325 PF00591 Glycosyl transferase family, a/b domain NRK99_RS07330 PF00117 Glutamine amidotransferase class-I NRK99_RS07330 PF02885 Glycosyl transferase family, helical bundle domain NRK99_RS07330 PF00591 Glycosyl transferase family, a/b domain NRK99_RS07335 PF04715 Anthranilate synthase component I, N terminal region NRK99_RS07335 PF00425 chorismate binding enzyme NRK99_RS07340 PF02811 PHP domain NRK99_RS07345 PF01300 Telomere recombination NRK99_RS07350 PF02616 Segregation and condensation protein ScpA NRK99_RS07355 PF04079 Segregation and condensation complex subunit ScpB NRK99_RS07360 PF00849 RNA pseudouridylate synthase NRK99_RS07360 PF01479 S4 domain NRK99_RS07385 PF08361 MAATS-type transcriptional repressor, C-terminal region NRK99_RS07385 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS07390 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS07390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS07395 PF00873 AcrB/AcrD/AcrF family NRK99_RS07400 PF02321 Outer membrane efflux protein NRK99_RS07410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRK99_RS07410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRK99_RS07410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRK99_RS07415 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS07425 PF00534 Glycosyl transferases group 1 NRK99_RS07435 PF00733 Asparagine synthase NRK99_RS07435 PF13537 Glutamine amidotransferase domain NRK99_RS07440 PF13477 Glycosyl transferase 4-like NRK99_RS07440 PF00534 Glycosyl transferases group 1 NRK99_RS07445 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS07450 PF02397 Bacterial sugar transferase NRK99_RS07455 PF02719 Polysaccharide biosynthesis protein NRK99_RS07460 PF16363 GDP-mannose 4,6 dehydratase NRK99_RS07465 PF04321 RmlD substrate binding domain NRK99_RS07470 PF00483 Nucleotidyl transferase NRK99_RS07475 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NRK99_RS07480 PF02706 Chain length determinant protein NRK99_RS07490 PF04337 Protein of unknown function, DUF480 NRK99_RS07495 PF00271 Helicase conserved C-terminal domain NRK99_RS07495 PF00176 SNF2 family N-terminal domain NRK99_RS07495 PF04434 SWIM zinc finger NRK99_RS07500 PF05472 DNA replication terminus site-binding protein (Ter protein) NRK99_RS07510 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NRK99_RS07515 PF00676 Dehydrogenase E1 component NRK99_RS07520 PF02779 Transketolase, pyrimidine binding domain NRK99_RS07520 PF02780 Transketolase, C-terminal domain NRK99_RS07525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRK99_RS07525 PF00364 Biotin-requiring enzyme NRK99_RS07525 PF02817 e3 binding domain NRK99_RS07530 PF00313 'Cold-shock' DNA-binding domain NRK99_RS07555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS07560 PF00892 EamA-like transporter family NRK99_RS07565 PF00455 DeoR C terminal sensor domain NRK99_RS07565 PF08220 DeoR-like helix-turn-helix domain NRK99_RS07570 PF02901 Pyruvate formate lyase-like NRK99_RS07570 PF01228 Glycine radical NRK99_RS07575 PF04055 Radical SAM superfamily NRK99_RS07580 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRK99_RS07590 PF11871 Domain of unknown function (DUF3391) NRK99_RS07590 PF01966 HD domain NRK99_RS07595 PF01479 S4 domain NRK99_RS07595 PF00849 RNA pseudouridylate synthase NRK99_RS07605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS07610 PF12850 Calcineurin-like phosphoesterase superfamily domain NRK99_RS07625 PF13144 Chaperone for flagella basal body P-ring formation NRK99_RS07630 PF00072 Response regulator receiver domain NRK99_RS07630 PF01584 CheW-like domain NRK99_RS07635 PF01739 CheR methyltransferase, SAM binding domain NRK99_RS07635 PF03705 CheR methyltransferase, all-alpha domain NRK99_RS07640 PF00460 Flagella basal body rod protein NRK99_RS07645 PF00460 Flagella basal body rod protein NRK99_RS07645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS07655 PF07559 Flagellar basal body protein FlaE NRK99_RS07655 PF00460 Flagella basal body rod protein NRK99_RS07655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS07660 PF00460 Flagella basal body rod protein NRK99_RS07660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS07665 PF00460 Flagella basal body rod protein NRK99_RS07665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS07670 PF02107 Flagellar L-ring protein NRK99_RS07675 PF02119 Flagellar P-ring protein NRK99_RS07680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRK99_RS07680 PF10135 Rod binding protein NRK99_RS07685 PF00460 Flagella basal body rod protein NRK99_RS07685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS07690 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS07695 PF00571 CBS domain NRK99_RS07695 PF01769 Divalent cation transporter NRK99_RS07695 PF03448 MgtE intracellular N domain NRK99_RS07700 PF02541 Ppx/GppA phosphatase family NRK99_RS07705 PF17941 Polyphosphate kinase C-terminal domain 1 NRK99_RS07705 PF02503 Polyphosphate kinase middle domain NRK99_RS07705 PF13090 Polyphosphate kinase C-terminal domain 2 NRK99_RS07705 PF13089 Polyphosphate kinase N-terminal domain NRK99_RS07710 PF01842 ACT domain NRK99_RS07720 PF06490 Flagellar regulatory protein FleQ NRK99_RS07720 PF02954 Bacterial regulatory protein, Fis family NRK99_RS07720 PF00158 Sigma-54 interaction domain NRK99_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS07725 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS07725 PF13188 PAS domain NRK99_RS07730 PF02954 Bacterial regulatory protein, Fis family NRK99_RS07730 PF00072 Response regulator receiver domain NRK99_RS07730 PF00158 Sigma-54 interaction domain NRK99_RS07735 PF01784 NIF3 (NGG1p interacting factor 3) NRK99_RS07740 PF00551 Formyl transferase NRK99_RS07745 PF00586 AIR synthase related protein, N-terminal domain NRK99_RS07745 PF02769 AIR synthase related protein, C-terminal domain NRK99_RS07760 PF00308 Bacterial dnaA protein NRK99_RS07765 PF00463 Isocitrate lyase family NRK99_RS07770 PF01274 Malate synthase NRK99_RS07785 PF14437 MafB19-like deaminase NRK99_RS07790 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS07795 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS07800 PF00005 ABC transporter NRK99_RS07805 PF01895 PhoU domain NRK99_RS07810 PF00571 CBS domain NRK99_RS07810 PF03471 Transporter associated domain NRK99_RS07810 PF01595 Cyclin M transmembrane N-terminal domain NRK99_RS07825 PF13520 Amino acid permease NRK99_RS07830 PF04116 Fatty acid hydroxylase superfamily NRK99_RS07845 PF00005 ABC transporter NRK99_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS07855 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS07860 PF07690 Major Facilitator Superfamily NRK99_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS07865 PF07730 Histidine kinase NRK99_RS07865 PF05231 MASE1 NRK99_RS07870 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS07870 PF00072 Response regulator receiver domain NRK99_RS07875 PF01272 Transcription elongation factor, GreA/GreB, C-term NRK99_RS07875 PF14760 Rnk N-terminus NRK99_RS07890 PF00245 Alkaline phosphatase NRK99_RS07895 PF00245 Alkaline phosphatase NRK99_RS07900 PF01926 50S ribosome-binding GTPase NRK99_RS07905 PF07690 Major Facilitator Superfamily NRK99_RS07915 PF00850 Histone deacetylase domain NRK99_RS07925 PF06733 DEAD_2 NRK99_RS07925 PF13307 Helicase C-terminal domain NRK99_RS07930 PF13609 Gram-negative porin NRK99_RS07940 PF00155 Aminotransferase class I and II NRK99_RS07945 PF05872 Bacterial protein of unknown function (DUF853) NRK99_RS07960 PF03772 Competence protein NRK99_RS07960 PF00753 Metallo-beta-lactamase superfamily NRK99_RS07965 PF00664 ABC transporter transmembrane region NRK99_RS07965 PF00005 ABC transporter NRK99_RS07970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NRK99_RS07975 PF03966 Trm112p-like protein NRK99_RS07980 PF02348 Cytidylyltransferase NRK99_RS07985 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS07985 PF00072 Response regulator receiver domain NRK99_RS07990 PF01541 GIY-YIG catalytic domain NRK99_RS07990 PF08459 UvrC Helix-hairpin-helix N-terminal NRK99_RS07990 PF02151 UvrB/uvrC motif NRK99_RS07995 PF01066 CDP-alcohol phosphatidyltransferase NRK99_RS08020 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB NRK99_RS08025 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRK99_RS08045 PF00037 4Fe-4S binding domain NRK99_RS08045 PF13247 4Fe-4S dicluster domain NRK99_RS08050 PF03916 Polysulphide reductase, NrfD NRK99_RS08055 PF00149 Calcineurin-like phosphoesterase NRK99_RS08065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRK99_RS08070 PF01406 tRNA synthetases class I (C) catalytic domain NRK99_RS08070 PF09190 DALR domain NRK99_RS08075 PF07179 SseB protein N-terminal domain NRK99_RS08075 PF14581 SseB protein C-terminal domain NRK99_RS08085 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS08085 PF13185 GAF domain NRK99_RS08115 PF01169 Uncharacterized protein family UPF0016 NRK99_RS08120 PF01253 Translation initiation factor SUI1 NRK99_RS08130 PF07670 Nucleoside recognition NRK99_RS08130 PF02421 Ferrous iron transport protein B NRK99_RS08130 PF07664 Ferrous iron transport protein B C terminus NRK99_RS08145 PF00483 Nucleotidyl transferase NRK99_RS08150 PF00437 Type II/IV secretion system protein NRK99_RS08160 PF00989 PAS fold NRK99_RS08160 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS08160 PF00072 Response regulator receiver domain NRK99_RS08160 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS08160 PF01627 Hpt domain NRK99_RS08165 PF01032 FecCD transport family NRK99_RS08170 PF00005 ABC transporter NRK99_RS08175 PF00793 DAHP synthetase I family NRK99_RS08180 PF01219 Prokaryotic diacylglycerol kinase NRK99_RS08185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRK99_RS08185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS08185 PF01842 ACT domain NRK99_RS08190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NRK99_RS08195 PF01812 5-formyltetrahydrofolate cyclo-ligase family NRK99_RS08205 PF05173 Dihydrodipicolinate reductase, C-terminus NRK99_RS08205 PF01113 Dihydrodipicolinate reductase, N-terminus NRK99_RS08210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NRK99_RS08210 PF00117 Glutamine amidotransferase class-I NRK99_RS08215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRK99_RS08215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NRK99_RS08215 PF02142 MGS-like domain NRK99_RS08220 PF00682 HMGL-like NRK99_RS08220 PF08502 LeuA allosteric (dimerisation) domain NRK99_RS08230 PF13533 Biotin-lipoyl like NRK99_RS08235 PF07690 Major Facilitator Superfamily NRK99_RS08240 PF07759 Protein of unknown function (DUF1615) NRK99_RS08250 PF08378 Nuclease-related domain NRK99_RS08280 PF13302 Acetyltransferase (GNAT) domain NRK99_RS08285 PF00271 Helicase conserved C-terminal domain NRK99_RS08285 PF00270 DEAD/DEAH box helicase NRK99_RS08295 PF14521 Lysine-specific metallo-endopeptidase NRK99_RS08310 PF00376 MerR family regulatory protein NRK99_RS08310 PF09278 MerR, DNA binding NRK99_RS08325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRK99_RS08325 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS08330 PF01493 GXGXG motif NRK99_RS08330 PF01645 Conserved region in glutamate synthase NRK99_RS08330 PF04898 Glutamate synthase central domain NRK99_RS08330 PF00310 Glutamine amidotransferases class-II NRK99_RS08335 PF16199 Radical_SAM C-terminal domain NRK99_RS08335 PF04055 Radical SAM superfamily NRK99_RS08340 PF00664 ABC transporter transmembrane region NRK99_RS08340 PF03412 Peptidase C39 family NRK99_RS08340 PF00005 ABC transporter NRK99_RS08380 PF00324 Amino acid permease NRK99_RS08390 PF03618 Kinase/pyrophosphorylase NRK99_RS08395 PF00391 PEP-utilising enzyme, mobile domain NRK99_RS08395 PF02896 PEP-utilising enzyme, TIM barrel domain NRK99_RS08395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRK99_RS08405 PF01915 Glycosyl hydrolase family 3 C-terminal domain NRK99_RS08405 PF14310 Fibronectin type III-like domain NRK99_RS08405 PF00933 Glycosyl hydrolase family 3 N terminal domain NRK99_RS08415 PF00082 Subtilase family NRK99_RS08415 PF01483 Proprotein convertase P-domain NRK99_RS08435 PF03180 NLPA lipoprotein NRK99_RS08440 PF01569 PAP2 superfamily NRK99_RS08445 PF11890 Domain of unknown function (DUF3410) NRK99_RS08445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRK99_RS08445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS08450 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRK99_RS08450 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRK99_RS08460 PF01416 tRNA pseudouridine synthase NRK99_RS08465 PF17848 Acetyl-coA carboxylase zinc finger domain NRK99_RS08465 PF01039 Carboxyl transferase domain NRK99_RS08470 PF08245 Mur ligase middle domain NRK99_RS08470 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS08475 PF05036 Sporulation related domain NRK99_RS08480 PF04358 DsrC like protein NRK99_RS08485 PF12805 FUSC-like inner membrane protein yccS NRK99_RS08490 PF01027 Inhibitor of apoptosis-promoting Bax1 NRK99_RS08510 PF02463 RecF/RecN/SMC N terminal domain NRK99_RS08510 PF06470 SMC proteins Flexible Hinge Domain NRK99_RS08515 PF13361 UvrD-like helicase C-terminal domain NRK99_RS08515 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS08535 PF13361 UvrD-like helicase C-terminal domain NRK99_RS08535 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS08535 PF12462 DNA helicase IV / RNA helicase N terminal NRK99_RS08575 PF04002 RadC-like JAB domain NRK99_RS08605 PF05930 Prophage CP4-57 regulatory protein (AlpA) NRK99_RS08620 PF05638 Type VI secretion system effector, Hcp NRK99_RS08625 PF04717 Type VI secretion system, phage-baseplate injector NRK99_RS08635 PF05593 RHS Repeat NRK99_RS08635 PF05488 PAAR motif NRK99_RS08655 PF00589 Phage integrase family NRK99_RS08655 PF13356 Arm DNA-binding domain NRK99_RS08665 PF03496 ADP-ribosyltransferase exoenzyme NRK99_RS08670 PF01312 FlhB HrpN YscU SpaS Family NRK99_RS08675 PF01311 Bacterial export proteins, family 1 NRK99_RS08680 PF01313 Bacterial export proteins, family 3 NRK99_RS08685 PF00813 FliP family NRK99_RS08690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRK99_RS08695 PF02120 Flagellar hook-length control protein FliK NRK99_RS08705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS08705 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRK99_RS08705 PF18269 T3SS EscN ATPase C-terminal domain NRK99_RS08710 PF07201 HrpJ-like domain NRK99_RS08715 PF09059 TyeA NRK99_RS08735 PF00771 FHIPEP family NRK99_RS08740 PF09621 Type III secretion system regulator (LcrR) NRK99_RS08750 PF04792 V antigen (LcrV) protein NRK99_RS08755 PF07720 Tetratricopeptide repeat NRK99_RS08760 PF04888 Secretion system effector C (SseC) like family NRK99_RS08765 PF05844 YopD protein NRK99_RS08770 PF05932 Tir chaperone protein (CesT) family NRK99_RS08785 PF12833 Helix-turn-helix domain NRK99_RS08790 PF16806 Antiactivator protein ExsD NRK99_RS08795 PF05932 Tir chaperone protein (CesT) family NRK99_RS08800 PF03958 Bacterial type II/III secretion system short domain NRK99_RS08800 PF00263 Bacterial type II and III secretion system protein NRK99_RS08805 PF16697 Inner membrane component of T3SS, cytoplasmic domain NRK99_RS08805 PF16693 Inner membrane component of T3SS, periplasmic domain NRK99_RS08815 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF NRK99_RS08820 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) NRK99_RS08825 PF09025 YopR, type III needle-polymerisation regulator NRK99_RS08830 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI NRK99_RS08835 PF01514 Secretory protein of YscJ/FliF family NRK99_RS08845 PF02108 Flagellar assembly protein FliH NRK99_RS08860 PF08019 Phosphoethanolamine transferase EptA/EptB NRK99_RS08860 PF00884 Sulfatase NRK99_RS08865 PF03706 Lysylphosphatidylglycerol synthase TM region NRK99_RS08865 PF09924 Uncharacterised conserved protein (DUF2156) NRK99_RS08875 PF08447 PAS fold NRK99_RS08875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS08880 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS08880 PF13426 PAS domain NRK99_RS08880 PF00563 EAL domain NRK99_RS08885 PF00849 RNA pseudouridylate synthase NRK99_RS08895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS08900 PF04209 homogentisate 1,2-dioxygenase NRK99_RS08910 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS08910 PF14497 Glutathione S-transferase, C-terminal domain NRK99_RS08930 PF13537 Glutamine amidotransferase domain NRK99_RS08930 PF00733 Asparagine synthase NRK99_RS08940 PF00999 Sodium/hydrogen exchanger family NRK99_RS08940 PF02254 TrkA-N domain NRK99_RS08945 PF13344 Haloacid dehalogenase-like hydrolase NRK99_RS08950 PF00962 Adenosine/AMP deaminase NRK99_RS08955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRK99_RS08960 PF03741 Integral membrane protein TerC family NRK99_RS08960 PF03471 Transporter associated domain NRK99_RS08970 PF02913 FAD linked oxidases, C-terminal domain NRK99_RS08970 PF13183 4Fe-4S dicluster domain NRK99_RS08970 PF01565 FAD binding domain NRK99_RS08980 PF03061 Thioesterase superfamily NRK99_RS08985 PF00270 DEAD/DEAH box helicase NRK99_RS08985 PF03880 DbpA RNA binding domain NRK99_RS08985 PF00271 Helicase conserved C-terminal domain NRK99_RS08990 PF03553 Na+/H+ antiporter family NRK99_RS08990 PF13726 Na+-H+ antiporter family NRK99_RS08995 PF00929 Exonuclease NRK99_RS09000 PF00672 HAMP domain NRK99_RS09000 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS09000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS09005 PF18393 MotY N-terminal domain NRK99_RS09005 PF00691 OmpA family NRK99_RS09010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS09015 PF00730 HhH-GPD superfamily base excision DNA repair protein NRK99_RS09015 PF00633 Helix-hairpin-helix motif NRK99_RS09015 PF10576 Iron-sulfur binding domain of endonuclease III NRK99_RS09020 PF02508 Rnf-Nqr subunit, membrane protein NRK99_RS09025 PF04205 FMN-binding domain NRK99_RS09030 PF03116 NQR2, RnfD, RnfE family NRK99_RS09035 PF10531 SLBB domain NRK99_RS09035 PF12838 4Fe-4S dicluster domain NRK99_RS09035 PF13375 RnfC Barrel sandwich hybrid domain NRK99_RS09035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRK99_RS09040 PF04060 Putative Fe-S cluster NRK99_RS09045 PF02508 Rnf-Nqr subunit, membrane protein NRK99_RS09050 PF00892 EamA-like transporter family NRK99_RS09055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS09055 PF08447 PAS fold NRK99_RS09055 PF13426 PAS domain NRK99_RS09065 PF07055 Enoyl reductase FAD binding domain NRK99_RS09065 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRK99_RS09065 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRK99_RS09070 PF03606 C4-dicarboxylate anaerobic carrier NRK99_RS09075 PF12795 Mechanosensitive ion channel porin domain NRK99_RS09075 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRK99_RS09075 PF00924 Mechanosensitive ion channel NRK99_RS09080 PF00155 Aminotransferase class I and II NRK99_RS09090 PF00462 Glutaredoxin NRK99_RS09095 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NRK99_RS09100 PF00271 Helicase conserved C-terminal domain NRK99_RS09100 PF04851 Type III restriction enzyme, res subunit NRK99_RS09105 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS09105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS09110 PF11742 Protein of unknown function (DUF3302) NRK99_RS09115 PF02554 Carbon starvation protein CstA NRK99_RS09120 PF00072 Response regulator receiver domain NRK99_RS09120 PF04397 LytTr DNA-binding domain NRK99_RS09125 PF06580 Histidine kinase NRK99_RS09125 PF07694 5TMR of 5TMR-LYT NRK99_RS09130 PF01966 HD domain NRK99_RS09135 PF00171 Aldehyde dehydrogenase family NRK99_RS09135 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS09145 PF01914 MarC family integral membrane protein NRK99_RS09150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS09160 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS09165 PF00005 ABC transporter NRK99_RS09165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS09170 PF00005 ABC transporter NRK99_RS09170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS09175 PF03741 Integral membrane protein TerC family NRK99_RS09180 PF00842 Alanine racemase, C-terminal domain NRK99_RS09180 PF01168 Alanine racemase, N-terminal domain NRK99_RS09190 PF00375 Sodium:dicarboxylate symporter family NRK99_RS09205 PF01979 Amidohydrolase family NRK99_RS09215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS09215 PF00672 HAMP domain NRK99_RS09220 PF01230 HIT domain NRK99_RS09255 PF07549 SecD/SecF GG Motif NRK99_RS09255 PF02355 Protein export membrane protein NRK99_RS09255 PF13721 SecD export protein N-terminal TM region NRK99_RS09260 PF02355 Protein export membrane protein NRK99_RS09260 PF07549 SecD/SecF GG Motif NRK99_RS09265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS09265 PF08447 PAS fold NRK99_RS09265 PF13426 PAS domain NRK99_RS09275 PF05661 Protein of unknown function (DUF808) NRK99_RS09280 PF08439 Oligopeptidase F NRK99_RS09280 PF01432 Peptidase family M3 NRK99_RS09285 PF08439 Oligopeptidase F NRK99_RS09285 PF01432 Peptidase family M3 NRK99_RS09290 PF00860 Permease family NRK99_RS09295 PF05728 Uncharacterised protein family (UPF0227) NRK99_RS09300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS09320 PF01906 Putative heavy-metal-binding NRK99_RS09330 PF02016 LD-carboxypeptidase N-terminal domain NRK99_RS09330 PF17676 LD-carboxypeptidase C-terminal domain NRK99_RS09335 PF00884 Sulfatase NRK99_RS09345 PF00696 Amino acid kinase family NRK99_RS09345 PF01842 ACT domain NRK99_RS09350 PF00583 Acetyltransferase (GNAT) family NRK99_RS09350 PF00696 Amino acid kinase family NRK99_RS09355 PF01625 Peptide methionine sulfoxide reductase NRK99_RS09375 PF00561 alpha/beta hydrolase fold NRK99_RS09380 PF03466 LysR substrate binding domain NRK99_RS09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS09385 PF02652 L-lactate permease NRK99_RS09390 PF02754 Cysteine-rich domain NRK99_RS09395 PF11870 Domain of unknown function (DUF3390) NRK99_RS09395 PF02589 LUD domain NRK99_RS09395 PF13183 4Fe-4S dicluster domain NRK99_RS09400 PF02589 LUD domain NRK99_RS09405 PF01565 FAD binding domain NRK99_RS09405 PF02913 FAD linked oxidases, C-terminal domain NRK99_RS09425 PF12704 MacB-like periplasmic core domain NRK99_RS09425 PF02687 FtsX-like permease family NRK99_RS09430 PF00005 ABC transporter NRK99_RS09440 PF03600 Citrate transporter NRK99_RS09450 PF07690 Major Facilitator Superfamily NRK99_RS09465 PF01593 Flavin containing amine oxidoreductase NRK99_RS09470 PF03239 Iron permease FTR1 family NRK99_RS09495 PF13533 Biotin-lipoyl like NRK99_RS09510 PF00916 Sulfate permease family NRK99_RS09510 PF01740 STAS domain NRK99_RS09525 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS09535 PF01168 Alanine racemase, N-terminal domain NRK99_RS09535 PF00842 Alanine racemase, C-terminal domain NRK99_RS09540 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NRK99_RS09540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRK99_RS09545 PF13247 4Fe-4S dicluster domain NRK99_RS09550 PF03916 Polysulphide reductase, NrfD NRK99_RS09555 PF00374 Nickel-dependent hydrogenase NRK99_RS09560 PF01750 Hydrogenase maturation protease NRK99_RS09565 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE NRK99_RS09570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS09580 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS09580 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS09585 PF00005 ABC transporter NRK99_RS09590 PF00005 ABC transporter NRK99_RS09595 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRK99_RS09605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NRK99_RS09610 PF00586 AIR synthase related protein, N-terminal domain NRK99_RS09610 PF02769 AIR synthase related protein, C-terminal domain NRK99_RS09615 PF01924 Hydrogenase formation hypA family NRK99_RS09620 PF01455 HupF/HypC family NRK99_RS09625 PF01300 Telomere recombination NRK99_RS09625 PF00708 Acylphosphatase NRK99_RS09625 PF17788 HypF Kae1-like domain NRK99_RS09625 PF07503 HypF finger NRK99_RS09630 PF09107 Elongation factor SelB, winged helix NRK99_RS09630 PF09106 Elongation factor SelB, winged helix NRK99_RS09630 PF09105 Elongation factor SelB, winged helix NRK99_RS09630 PF03144 Elongation factor Tu domain 2 NRK99_RS09630 PF00009 Elongation factor Tu GTP binding domain NRK99_RS09635 PF12390 Selenocysteine synthase N terminal NRK99_RS09635 PF03841 L-seryl-tRNA selenium transferase NRK99_RS09645 PF01750 Hydrogenase maturation protease NRK99_RS09650 PF07450 Formate hydrogenlyase maturation protein HycH NRK99_RS09655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRK99_RS09660 PF12838 4Fe-4S dicluster domain NRK99_RS09665 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRK99_RS09665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRK99_RS09665 PF00374 Nickel-dependent hydrogenase NRK99_RS09670 PF00146 NADH dehydrogenase NRK99_RS09675 PF00361 Proton-conducting membrane transporter NRK99_RS09680 PF00037 4Fe-4S binding domain NRK99_RS09680 PF12798 4Fe-4S binding domain NRK99_RS09685 PF00202 Aminotransferase class-III NRK99_RS09690 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS09690 PF00107 Zinc-binding dehydrogenase NRK99_RS09695 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS09700 PF07690 Major Facilitator Superfamily NRK99_RS09710 PF02705 K+ potassium transporter NRK99_RS09720 PF13247 4Fe-4S dicluster domain NRK99_RS09720 PF12800 4Fe-4S binding domain NRK99_RS09735 PF00158 Sigma-54 interaction domain NRK99_RS09735 PF01590 GAF domain NRK99_RS09735 PF02954 Bacterial regulatory protein, Fis family NRK99_RS09740 PF02634 FdhD/NarQ family NRK99_RS09745 PF02132 RecR protein NRK99_RS09745 PF13662 Toprim domain NRK99_RS09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS09750 PF00183 Hsp90 protein NRK99_RS09755 PF05191 Adenylate kinase, active site lid NRK99_RS09760 PF00762 Ferrochelatase NRK99_RS09765 PF01124 MAPEG family NRK99_RS09770 PF00294 pfkB family carbohydrate kinase NRK99_RS09785 PF00563 EAL domain NRK99_RS09785 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS09785 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS09790 PF00483 Nucleotidyl transferase NRK99_RS09800 PF07273 Protein of unknown function (DUF1439) NRK99_RS09810 PF00425 chorismate binding enzyme NRK99_RS09815 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS09815 PF00501 AMP-binding enzyme NRK99_RS09820 PF00550 Phosphopantetheine attachment site NRK99_RS09820 PF00857 Isochorismatase family NRK99_RS09825 PF00501 AMP-binding enzyme NRK99_RS09825 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS09825 PF00668 Condensation domain NRK99_RS09825 PF00550 Phosphopantetheine attachment site NRK99_RS09825 PF00975 Thioesterase domain NRK99_RS09835 PF00501 AMP-binding enzyme NRK99_RS09835 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS09835 PF00668 Condensation domain NRK99_RS09835 PF07993 Male sterility protein NRK99_RS09835 PF00550 Phosphopantetheine attachment site NRK99_RS09840 PF00501 AMP-binding enzyme NRK99_RS09840 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS09840 PF00668 Condensation domain NRK99_RS09840 PF16197 Ketoacyl-synthetase C-terminal extension NRK99_RS09840 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS09840 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS09840 PF08659 KR domain NRK99_RS09840 PF00550 Phosphopantetheine attachment site NRK99_RS09840 PF14765 Polyketide synthase dehydratase NRK99_RS09845 PF01497 Periplasmic binding protein NRK99_RS09850 PF01648 4'-phosphopantetheinyl transferase superfamily NRK99_RS09850 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NRK99_RS09855 PF00005 ABC transporter NRK99_RS09860 PF01032 FecCD transport family NRK99_RS09865 PF01032 FecCD transport family NRK99_RS09870 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS09870 PF00593 TonB dependent receptor NRK99_RS09885 PF11143 Protein of unknown function (DUF2919) NRK99_RS09890 PF01544 CorA-like Mg2+ transporter protein NRK99_RS09900 PF01012 Electron transfer flavoprotein domain NRK99_RS09905 PF00766 Electron transfer flavoprotein FAD-binding domain NRK99_RS09905 PF01012 Electron transfer flavoprotein domain NRK99_RS09910 PF00266 Aminotransferase class-V NRK99_RS09915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRK99_RS09920 PF00793 DAHP synthetase I family NRK99_RS09925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS09925 PF00672 HAMP domain NRK99_RS09930 PF04055 Radical SAM superfamily NRK99_RS09935 PF13742 OB-fold nucleic acid binding domain NRK99_RS09935 PF02601 Exonuclease VII, large subunit NRK99_RS09940 PF00892 EamA-like transporter family NRK99_RS09945 PF02472 Biopolymer transport protein ExbD/TolR NRK99_RS09950 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS09960 PF02705 K+ potassium transporter NRK99_RS09965 PF00478 IMP dehydrogenase / GMP reductase domain NRK99_RS09965 PF00571 CBS domain NRK99_RS09970 PF02540 NAD synthase NRK99_RS09970 PF00958 GMP synthase C terminal domain NRK99_RS09970 PF00117 Glutamine amidotransferase class-I NRK99_RS09985 PF02805 Metal binding domain of Ada NRK99_RS09985 PF12833 Helix-turn-helix domain NRK99_RS09985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRK99_RS09985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRK99_RS10005 PF05724 Thiopurine S-methyltransferase (TPMT) NRK99_RS10010 PF00675 Insulinase (Peptidase family M16) NRK99_RS10010 PF05193 Peptidase M16 inactive domain NRK99_RS10015 PF00300 Histidine phosphatase superfamily (branch 1) NRK99_RS10025 PF00892 EamA-like transporter family NRK99_RS10030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS10035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NRK99_RS10040 PF00271 Helicase conserved C-terminal domain NRK99_RS10040 PF00270 DEAD/DEAH box helicase NRK99_RS10040 PF03461 TRCF domain NRK99_RS10040 PF02559 CarD-like/TRCF domain NRK99_RS10040 PF17757 UvrB interaction domain NRK99_RS10050 PF12704 MacB-like periplasmic core domain NRK99_RS10050 PF02687 FtsX-like permease family NRK99_RS10055 PF00005 ABC transporter NRK99_RS10060 PF12704 MacB-like periplasmic core domain NRK99_RS10060 PF02687 FtsX-like permease family NRK99_RS10075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS10075 PF05698 Bacterial trigger factor protein (TF) C-terminus NRK99_RS10075 PF05697 Bacterial trigger factor protein (TF) NRK99_RS10080 PF00574 Clp protease NRK99_RS10085 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS10085 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS10085 PF06689 ClpX C4-type zinc finger NRK99_RS10090 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS10090 PF05362 Lon protease (S16) C-terminal proteolytic domain NRK99_RS10090 PF02190 ATP-dependent protease La (LON) substrate-binding domain NRK99_RS10095 PF00216 Bacterial DNA-binding protein NRK99_RS10105 PF00005 ABC transporter NRK99_RS10105 PF12848 ABC transporter NRK99_RS10110 PF00474 Sodium:solute symporter family NRK99_RS10115 PF04341 Protein of unknown function, DUF485 NRK99_RS10130 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS10135 PF01235 Sodium:alanine symporter family NRK99_RS10145 PF06167 Glucose-regulated metallo-peptidase M90 NRK99_RS10150 PF01184 GPR1/FUN34/yaaH family NRK99_RS10165 PF00376 MerR family regulatory protein NRK99_RS10165 PF09278 MerR, DNA binding NRK99_RS10170 PF00682 HMGL-like NRK99_RS10175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRK99_RS10175 PF00364 Biotin-requiring enzyme NRK99_RS10175 PF00289 Biotin carboxylase, N-terminal domain NRK99_RS10175 PF02785 Biotin carboxylase C-terminal domain NRK99_RS10180 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS10185 PF01039 Carboxyl transferase domain NRK99_RS10190 PF02770 Acyl-CoA dehydrogenase, middle domain NRK99_RS10190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRK99_RS10190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRK99_RS10195 PF00171 Aldehyde dehydrogenase family NRK99_RS10200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRK99_RS10200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRK99_RS10200 PF02770 Acyl-CoA dehydrogenase, middle domain NRK99_RS10205 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS10210 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS10215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRK99_RS10215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRK99_RS10225 PF13520 Amino acid permease NRK99_RS10230 PF01925 Sulfite exporter TauE/SafE NRK99_RS10240 PF03466 LysR substrate binding domain NRK99_RS10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS10245 PF12146 Serine aminopeptidase, S33 NRK99_RS10250 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NRK99_RS10250 PF07676 WD40-like Beta Propeller Repeat NRK99_RS10250 PF00326 Prolyl oligopeptidase family NRK99_RS10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS10260 PF03466 LysR substrate binding domain NRK99_RS10265 PF00248 Aldo/keto reductase family NRK99_RS10270 PF12706 Beta-lactamase superfamily domain NRK99_RS10275 PF00672 HAMP domain NRK99_RS10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS10275 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS10275 PF01627 Hpt domain NRK99_RS10275 PF00072 Response regulator receiver domain NRK99_RS10275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS10305 PF00072 Response regulator receiver domain NRK99_RS10305 PF00211 Adenylate and Guanylate cyclase catalytic domain NRK99_RS10310 PF00534 Glycosyl transferases group 1 NRK99_RS10315 PF02397 Bacterial sugar transferase NRK99_RS10320 PF00535 Glycosyl transferase family 2 NRK99_RS10320 PF07238 PilZ domain NRK99_RS10320 PF03552 Cellulose synthase NRK99_RS10325 PF00534 Glycosyl transferases group 1 NRK99_RS10325 PF13439 Glycosyltransferase Family 4 NRK99_RS10395 PF00534 Glycosyl transferases group 1 NRK99_RS10400 PF00862 Sucrose synthase NRK99_RS10400 PF00534 Glycosyl transferases group 1 NRK99_RS10405 PF03466 LysR substrate binding domain NRK99_RS10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS10410 PF00232 Glycosyl hydrolase family 1 NRK99_RS10415 PF01966 HD domain NRK99_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS10425 PF03466 LysR substrate binding domain NRK99_RS10430 PF01261 Xylose isomerase-like TIM barrel NRK99_RS10435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRK99_RS10435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRK99_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS10440 PF03466 LysR substrate binding domain NRK99_RS10450 PF03279 Bacterial lipid A biosynthesis acyltransferase NRK99_RS10455 PF03279 Bacterial lipid A biosynthesis acyltransferase NRK99_RS10470 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS10480 PF00136 DNA polymerase family B NRK99_RS10480 PF03104 DNA polymerase family B, exonuclease domain NRK99_RS10510 PF01554 MatE NRK99_RS10515 PF06786 Uncharacterised protein family (UPF0253) NRK99_RS10520 PF00677 Lumazine binding domain NRK99_RS10530 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS10535 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS10535 PF02222 ATP-grasp domain NRK99_RS10540 PF00892 EamA-like transporter family NRK99_RS10545 PF02525 Flavodoxin-like fold NRK99_RS10570 PF17783 CvfB-like winged helix domain NRK99_RS10570 PF13509 S1 domain NRK99_RS10580 PF04269 Protein of unknown function, DUF440 NRK99_RS10590 PF00912 Transglycosylase NRK99_RS10595 PF04269 Protein of unknown function, DUF440 NRK99_RS10600 PF03776 Septum formation topological specificity factor MinE NRK99_RS10605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NRK99_RS10610 PF05209 Septum formation inhibitor MinC, N-terminal domain NRK99_RS10610 PF03775 Septum formation inhibitor MinC, C-terminal domain NRK99_RS10615 PF05166 YcgL domain NRK99_RS10620 PF13406 Transglycosylase SLT domain NRK99_RS10625 PF03313 Serine dehydratase alpha chain NRK99_RS10625 PF03315 Serine dehydratase beta chain NRK99_RS10630 PF03313 Serine dehydratase alpha chain NRK99_RS10630 PF03315 Serine dehydratase beta chain NRK99_RS10635 PF06865 Pyrimidine/purine nucleoside phosphorylase NRK99_RS10640 PF00375 Sodium:dicarboxylate symporter family NRK99_RS10645 PF00376 MerR family regulatory protein NRK99_RS10645 PF09278 MerR, DNA binding NRK99_RS10650 PF02803 Thiolase, C-terminal domain NRK99_RS10650 PF00108 Thiolase, N-terminal domain NRK99_RS10655 PF08668 HDOD domain NRK99_RS10655 PF00563 EAL domain NRK99_RS10660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRK99_RS10665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRK99_RS10675 PF04542 Sigma-70 region 2 NRK99_RS10675 PF08281 Sigma-70, region 4 NRK99_RS10700 PF01882 Protein of unknown function DUF58 NRK99_RS10705 PF07726 ATPase family associated with various cellular activities (AAA) NRK99_RS10705 PF17863 AAA lid domain NRK99_RS10710 PF02803 Thiolase, C-terminal domain NRK99_RS10710 PF00108 Thiolase, N-terminal domain NRK99_RS10715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRK99_RS10715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRK99_RS10715 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS10725 PF07152 YaeQ protein NRK99_RS10745 PF00158 Sigma-54 interaction domain NRK99_RS10745 PF13188 PAS domain NRK99_RS10745 PF02954 Bacterial regulatory protein, Fis family NRK99_RS10750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRK99_RS10750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRK99_RS10755 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS10760 PF07687 Peptidase dimerisation domain NRK99_RS10760 PF01546 Peptidase family M20/M25/M40 NRK99_RS10765 PF01979 Amidohydrolase family NRK99_RS10770 PF00696 Amino acid kinase family NRK99_RS10775 PF00892 EamA-like transporter family NRK99_RS10780 PF13478 XdhC Rossmann domain NRK99_RS10780 PF02625 XdhC and CoxI family NRK99_RS10790 PF12804 MobA-like NTP transferase domain NRK99_RS10795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRK99_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS10800 PF01979 Amidohydrolase family NRK99_RS10805 PF00941 FAD binding domain in molybdopterin dehydrogenase NRK99_RS10810 PF01799 [2Fe-2S] binding domain NRK99_RS10810 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRK99_RS10810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRK99_RS10815 PF00860 Permease family NRK99_RS10820 PF01979 Amidohydrolase family NRK99_RS10825 PF00860 Permease family NRK99_RS10830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRK99_RS10830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRK99_RS10835 PF03450 CO dehydrogenase flavoprotein C-terminal domain NRK99_RS10835 PF00941 FAD binding domain in molybdopterin dehydrogenase NRK99_RS10840 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS10840 PF01799 [2Fe-2S] binding domain NRK99_RS10850 PF05433 Glycine zipper 2TM domain NRK99_RS10860 PF03606 C4-dicarboxylate anaerobic carrier NRK99_RS10865 PF00501 AMP-binding enzyme NRK99_RS10865 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS10875 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NRK99_RS10875 PF01502 Phosphoribosyl-AMP cyclohydrolase NRK99_RS10880 PF00977 Histidine biosynthesis protein NRK99_RS10885 PF01627 Hpt domain NRK99_RS10885 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS10885 PF00072 Response regulator receiver domain NRK99_RS10890 PF08448 PAS fold NRK99_RS10890 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS10895 PF00072 Response regulator receiver domain NRK99_RS10900 PF00977 Histidine biosynthesis protein NRK99_RS10905 PF00117 Glutamine amidotransferase class-I NRK99_RS10910 PF08645 Polynucleotide kinase 3 phosphatase NRK99_RS10910 PF00475 Imidazoleglycerol-phosphate dehydratase NRK99_RS10915 PF00155 Aminotransferase class I and II NRK99_RS10920 PF00815 Histidinol dehydrogenase NRK99_RS10925 PF01634 ATP phosphoribosyltransferase NRK99_RS10925 PF08029 HisG, C-terminal domain NRK99_RS10935 PF04851 Type III restriction enzyme, res subunit NRK99_RS10935 PF13307 Helicase C-terminal domain NRK99_RS10940 PF00814 Glycoprotease family NRK99_RS10950 PF00561 alpha/beta hydrolase fold NRK99_RS10955 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS10955 PF00501 AMP-binding enzyme NRK99_RS10960 PF00570 HRDC domain NRK99_RS10960 PF01612 3'-5' exonuclease NRK99_RS10965 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS10975 PF01207 Dihydrouridine synthase (Dus) NRK99_RS10980 PF04304 Protein of unknown function (DUF454) NRK99_RS10985 PF00156 Phosphoribosyl transferase domain NRK99_RS10990 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NRK99_RS10990 PF12169 DNA polymerase III subunits gamma and tau domain III NRK99_RS10990 PF12170 DNA polymerase III tau subunit V interacting with alpha NRK99_RS10995 PF02575 YbaB/EbfC DNA-binding family NRK99_RS11000 PF00141 Peroxidase NRK99_RS11010 PF07670 Nucleoside recognition NRK99_RS11015 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS11015 PF00072 Response regulator receiver domain NRK99_RS11020 PF00571 CBS domain NRK99_RS11020 PF02272 DHHA1 domain NRK99_RS11020 PF01743 Poly A polymerase head domain NRK99_RS11020 PF01368 DHH family NRK99_RS11025 PF04408 Helicase associated domain (HA2) NRK99_RS11025 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NRK99_RS11025 PF00270 DEAD/DEAH box helicase NRK99_RS11025 PF00271 Helicase conserved C-terminal domain NRK99_RS11025 PF11898 Domain of unknown function (DUF3418) NRK99_RS11035 PF01386 Ribosomal L25p family NRK99_RS11040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS11040 PF00072 Response regulator receiver domain NRK99_RS11040 PF01627 Hpt domain NRK99_RS11040 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS11040 PF00672 HAMP domain NRK99_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS11045 PF00072 Response regulator receiver domain NRK99_RS11050 PF00753 Metallo-beta-lactamase superfamily NRK99_RS11060 PF02769 AIR synthase related protein, C-terminal domain NRK99_RS11060 PF00586 AIR synthase related protein, N-terminal domain NRK99_RS11075 PF10672 S-adenosylmethionine-dependent methyltransferase NRK99_RS11075 PF17785 PUA-like domain NRK99_RS11080 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS11080 PF00672 HAMP domain NRK99_RS11085 PF00708 Acylphosphatase NRK99_RS11090 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS11090 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS11095 PF08264 Anticodon-binding domain of tRNA NRK99_RS11095 PF09334 tRNA synthetases class I (M) NRK99_RS11095 PF01588 Putative tRNA binding domain NRK99_RS11100 PF10609 NUBPL iron-transfer P-loop NTPase NRK99_RS11105 PF00485 Phosphoribulokinase / Uridine kinase family NRK99_RS11110 PF00692 dUTPase NRK99_RS11115 PF01384 Phosphate transporter family NRK99_RS11120 PF12111 Polyribonucleotide phosphorylase C terminal NRK99_RS11120 PF10150 Ribonuclease E/G family NRK99_RS11120 PF00575 S1 RNA binding domain NRK99_RS11125 PF01479 S4 domain NRK99_RS11125 PF00849 RNA pseudouridylate synthase NRK99_RS11130 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS11135 PF02545 Maf-like protein NRK99_RS11145 PF02620 Large ribosomal RNA subunit accumulation protein YceD NRK99_RS11150 PF01783 Ribosomal L32p protein family NRK99_RS11155 PF02504 Fatty acid synthesis protein NRK99_RS11160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRK99_RS11160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRK99_RS11165 PF00698 Acyl transferase domain NRK99_RS11175 PF00550 Phosphopantetheine attachment site NRK99_RS11180 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS11180 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS11185 PF01063 Amino-transferase class IV NRK99_RS11190 PF02618 YceG-like family NRK99_RS11195 PF02223 Thymidylate kinase NRK99_RS11200 PF09115 DNA polymerase III, delta subunit, C terminal NRK99_RS11205 PF01026 TatD related DNase NRK99_RS11210 PF00589 Phage integrase family NRK99_RS11220 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NRK99_RS11220 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NRK99_RS11220 PF01189 16S rRNA methyltransferase RsmB/F NRK99_RS11225 PF02470 MlaD protein NRK99_RS11230 PF04403 Paraquat-inducible protein A NRK99_RS11245 PF00285 Citrate synthase, C-terminal domain NRK99_RS11250 PF03972 MmgE/PrpD family NRK99_RS11265 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NRK99_RS11265 PF06974 Protein of unknown function (DUF1298) NRK99_RS11290 PF00106 short chain dehydrogenase NRK99_RS11300 PF07130 YebG protein NRK99_RS11325 PF05707 Zonular occludens toxin (Zot) NRK99_RS11330 PF10734 Protein of unknown function (DUF2523) NRK99_RS11370 PF13654 AAA domain NRK99_RS11370 PF05362 Lon protease (S16) C-terminal proteolytic domain NRK99_RS11375 PF07977 FabA-like domain NRK99_RS11380 PF04957 Ribosome modulation factor NRK99_RS11390 PF00005 ABC transporter NRK99_RS11390 PF16326 ABC transporter C-terminal domain NRK99_RS11390 PF12848 ABC transporter NRK99_RS11400 PF01170 Putative RNA methylase family UPF0020 NRK99_RS11400 PF02926 THUMP domain NRK99_RS11400 PF10672 S-adenosylmethionine-dependent methyltransferase NRK99_RS11405 PF07126 Cell-division protein ZapC NRK99_RS11410 PF01180 Dihydroorotate dehydrogenase NRK99_RS11415 PF05088 Bacterial NAD-glutamate dehydrogenase NRK99_RS11425 PF11940 Domain of unknown function (DUF3458) Ig-like fold NRK99_RS11425 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NRK99_RS11425 PF01433 Peptidase family M1 domain NRK99_RS11430 PF03572 Peptidase family S41 NRK99_RS11430 PF17804 Tail specific protease N-terminal domain NRK99_RS11430 PF11818 C-terminal domain of tail specific protease (DUF3340) NRK99_RS11430 PF00595 PDZ domain NRK99_RS11435 PF04352 ProQ/FINO family NRK99_RS11435 PF17516 ProQ C-terminal domain NRK99_RS11440 PF13185 GAF domain NRK99_RS11450 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRK99_RS11465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRK99_RS11465 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NRK99_RS11475 PF00403 Heavy-metal-associated domain NRK99_RS11490 PF13545 Crp-like helix-turn-helix domain NRK99_RS11490 PF00027 Cyclic nucleotide-binding domain NRK99_RS11495 PF00582 Universal stress protein family NRK99_RS11500 PF01171 PP-loop family NRK99_RS11515 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS11515 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS11520 PF05025 RbsD / FucU transport protein family NRK99_RS11525 PF00005 ABC transporter NRK99_RS11530 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS11535 PF13407 Periplasmic binding protein domain NRK99_RS11540 PF00294 pfkB family carbohydrate kinase NRK99_RS11545 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS11550 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS11550 PF17152 Periplasmic sensor domain NRK99_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS11575 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS11575 PF09456 RcsC Alpha-Beta-Loop (ABL) NRK99_RS11575 PF00072 Response regulator receiver domain NRK99_RS11580 PF00216 Bacterial DNA-binding protein NRK99_RS11585 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NRK99_RS11585 PF03147 Ferredoxin-fold anticodon binding domain NRK99_RS11585 PF01588 Putative tRNA binding domain NRK99_RS11585 PF03483 B3/4 domain NRK99_RS11585 PF03484 tRNA synthetase B5 domain NRK99_RS11590 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NRK99_RS11590 PF01409 tRNA synthetases class II core domain (F) NRK99_RS11595 PF00453 Ribosomal protein L20 NRK99_RS11600 PF01632 Ribosomal protein L35 NRK99_RS11605 PF05198 Translation initiation factor IF-3, N-terminal domain NRK99_RS11605 PF00707 Translation initiation factor IF-3, C-terminal domain NRK99_RS11610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRK99_RS11610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRK99_RS11610 PF03129 Anticodon binding domain NRK99_RS11610 PF02824 TGS domain NRK99_RS11620 PF04055 Radical SAM superfamily NRK99_RS11630 PF03989 DNA gyrase C-terminal domain, beta-propeller NRK99_RS11630 PF00521 DNA gyrase/topoisomerase IV, subunit A NRK99_RS11640 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS11645 PF03477 ATP cone domain NRK99_RS11645 PF02867 Ribonucleotide reductase, barrel domain NRK99_RS11645 PF00317 Ribonucleotide reductase, all-alpha domain NRK99_RS11650 PF00268 Ribonucleotide reductase, small chain NRK99_RS11655 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS11660 PF06725 3D domain NRK99_RS11660 PF03562 MltA specific insert domain NRK99_RS11665 PF06945 Protein of unknown function (DUF1289) NRK99_RS11670 PF02378 Phosphotransferase system, EIIC NRK99_RS11670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRK99_RS11675 PF00294 pfkB family carbohydrate kinase NRK99_RS11680 PF00381 PTS HPr component phosphorylation site NRK99_RS11680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS11685 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS11685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRK99_RS11690 PF03222 Tryptophan/tyrosine permease family NRK99_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS11705 PF00271 Helicase conserved C-terminal domain NRK99_RS11705 PF00270 DEAD/DEAH box helicase NRK99_RS11715 PF01264 Chorismate synthase NRK99_RS11720 PF05175 Methyltransferase small domain NRK99_RS11725 PF01713 Smr domain NRK99_RS11735 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS11735 PF08448 PAS fold NRK99_RS11740 PF00300 Histidine phosphatase superfamily (branch 1) NRK99_RS11755 PF08329 Chitinase A, N-terminal domain NRK99_RS11755 PF00704 Glycosyl hydrolases family 18 NRK99_RS11765 PF03831 PhnA domain NRK99_RS11765 PF08274 PhnA Zinc-Ribbon NRK99_RS11785 PF02567 Phenazine biosynthesis-like protein NRK99_RS11810 PF01327 Polypeptide deformylase NRK99_RS11835 PF03330 Lytic transglycolase NRK99_RS11845 PF04310 MukB N-terminal NRK99_RS11845 PF16330 MukB hinge domain NRK99_RS11850 PF04288 MukE-like family NRK99_RS11855 PF03882 MukF winged-helix domain NRK99_RS11855 PF17193 MukF C-terminal domain NRK99_RS11855 PF17192 MukF middle domain NRK99_RS11860 PF13847 Methyltransferase domain NRK99_RS11865 PF02698 DUF218 domain NRK99_RS11870 PF00121 Triosephosphate isomerase NRK99_RS11875 PF00365 Phosphofructokinase NRK99_RS11880 PF07687 Peptidase dimerisation domain NRK99_RS11880 PF01546 Peptidase family M20/M25/M40 NRK99_RS11885 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS11890 PF00883 Cytosol aminopeptidase family, catalytic domain NRK99_RS11890 PF02789 Cytosol aminopeptidase family, N-terminal domain NRK99_RS11935 PF00128 Alpha amylase, catalytic domain NRK99_RS11935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRK99_RS11945 PF11398 Protein of unknown function (DUF2813) NRK99_RS11955 PF14525 AraC-binding-like domain NRK99_RS11955 PF12833 Helix-turn-helix domain NRK99_RS11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS11965 PF03466 LysR substrate binding domain NRK99_RS11970 PF01925 Sulfite exporter TauE/SafE NRK99_RS11975 PF03942 DTW domain NRK99_RS11980 PF18029 Glyoxalase-like domain NRK99_RS11980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS11985 PF07478 D-ala D-ala ligase C-terminus NRK99_RS11985 PF01820 D-ala D-ala ligase N-terminus NRK99_RS11995 PF00255 Glutathione peroxidase NRK99_RS12000 PF00271 Helicase conserved C-terminal domain NRK99_RS12000 PF00270 DEAD/DEAH box helicase NRK99_RS12005 PF13673 Acetyltransferase (GNAT) domain NRK99_RS12020 PF01928 CYTH domain NRK99_RS12035 PF00583 Acetyltransferase (GNAT) family NRK99_RS12040 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS12045 PF03992 Antibiotic biosynthesis monooxygenase NRK99_RS12050 PF08543 Phosphomethylpyrimidine kinase NRK99_RS12070 PF00561 alpha/beta hydrolase fold NRK99_RS12070 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NRK99_RS12075 PF01575 MaoC like domain NRK99_RS12095 PF00664 ABC transporter transmembrane region NRK99_RS12095 PF00005 ABC transporter NRK99_RS12100 PF00664 ABC transporter transmembrane region NRK99_RS12100 PF00005 ABC transporter NRK99_RS12105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRK99_RS12105 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS12105 PF00672 HAMP domain NRK99_RS12105 PF01627 Hpt domain NRK99_RS12105 PF00072 Response regulator receiver domain NRK99_RS12110 PF00085 Thioredoxin NRK99_RS12115 PF00939 Sodium:sulfate symporter transmembrane region NRK99_RS12120 PF00343 Carbohydrate phosphorylase NRK99_RS12140 PF04715 Anthranilate synthase component I, N terminal region NRK99_RS12140 PF00425 chorismate binding enzyme NRK99_RS12145 PF00293 NUDIX domain NRK99_RS12150 PF03222 Tryptophan/tyrosine permease family NRK99_RS12155 PF00375 Sodium:dicarboxylate symporter family NRK99_RS12160 PF16124 RecQ zinc-binding NRK99_RS12160 PF00570 HRDC domain NRK99_RS12160 PF00271 Helicase conserved C-terminal domain NRK99_RS12160 PF09382 RQC domain NRK99_RS12160 PF00270 DEAD/DEAH box helicase NRK99_RS12165 PF08298 PrkA AAA domain NRK99_RS12165 PF06798 PrkA serine protein kinase C-terminal domain NRK99_RS12170 PF04285 Protein of unknown function (DUF444) NRK99_RS12175 PF04293 SpoVR like protein NRK99_RS12180 PF07840 FadR C-terminal domain NRK99_RS12180 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS12185 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NRK99_RS12190 PF02600 Disulfide bond formation protein DsbB NRK99_RS12195 PF09335 SNARE associated Golgi protein NRK99_RS12205 PF00271 Helicase conserved C-terminal domain NRK99_RS12205 PF17757 UvrB interaction domain NRK99_RS12205 PF12344 Ultra-violet resistance protein B NRK99_RS12205 PF02151 UvrB/uvrC motif NRK99_RS12205 PF04851 Type III restriction enzyme, res subunit NRK99_RS12215 PF06826 Predicted Permease Membrane Region NRK99_RS12215 PF02080 TrkA-C domain NRK99_RS12220 PF01464 Transglycosylase SLT domain NRK99_RS12220 PF01551 Peptidase family M23 NRK99_RS12220 PF10145 Phage-related minor tail protein NRK99_RS12225 PF03401 Tripartite tricarboxylate transporter family receptor NRK99_RS12235 PF01970 Tripartite tricarboxylate transporter TctA family NRK99_RS12240 PF00072 Response regulator receiver domain NRK99_RS12240 PF12431 Transcriptional regulator NRK99_RS12240 PF08279 HTH domain NRK99_RS12245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS12245 PF00989 PAS fold NRK99_RS12245 PF17203 Single cache domain 3 NRK99_RS12245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRK99_RS12250 PF00480 ROK family NRK99_RS12250 PF01047 MarR family NRK99_RS12255 PF17200 Single Cache domain 2 NRK99_RS12255 PF00672 HAMP domain NRK99_RS12255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS12260 PF02810 SEC-C motif NRK99_RS12265 PF04324 BFD-like [2Fe-2S] binding domain NRK99_RS12265 PF01266 FAD dependent oxidoreductase NRK99_RS12270 PF00890 FAD binding domain NRK99_RS12275 PF02754 Cysteine-rich domain NRK99_RS12275 PF13183 4Fe-4S dicluster domain NRK99_RS12285 PF02335 Cytochrome c552 NRK99_RS12290 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRK99_RS12290 PF13435 Cytochrome c554 and c-prime NRK99_RS12295 PF00037 4Fe-4S binding domain NRK99_RS12295 PF13247 4Fe-4S dicluster domain NRK99_RS12300 PF03916 Polysulphide reductase, NrfD NRK99_RS12305 PF01578 Cytochrome C assembly protein NRK99_RS12305 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRK99_RS12310 PF08534 Redoxin NRK99_RS12315 PF03918 Cytochrome C biogenesis protein NRK99_RS12325 PF00768 D-alanyl-D-alanine carboxypeptidase NRK99_RS12330 PF01212 Beta-eliminating lyase NRK99_RS12340 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NRK99_RS12345 PF01266 FAD dependent oxidoreductase NRK99_RS12350 PF00571 CBS domain NRK99_RS12350 PF00478 IMP dehydrogenase / GMP reductase domain NRK99_RS12365 PF08267 Cobalamin-independent synthase, N-terminal domain NRK99_RS12365 PF01717 Cobalamin-independent synthase, Catalytic domain NRK99_RS12370 PF03466 LysR substrate binding domain NRK99_RS12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS12380 PF00593 TonB dependent receptor NRK99_RS12380 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS12385 PF12833 Helix-turn-helix domain NRK99_RS12390 PF00106 short chain dehydrogenase NRK99_RS12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS12395 PF03466 LysR substrate binding domain NRK99_RS12400 PF13460 NAD(P)H-binding NRK99_RS12410 PF01053 Cys/Met metabolism PLP-dependent enzyme NRK99_RS12415 PF00675 Insulinase (Peptidase family M16) NRK99_RS12415 PF05193 Peptidase M16 inactive domain NRK99_RS12420 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRK99_RS12420 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRK99_RS12425 PF00893 Small Multidrug Resistance protein NRK99_RS12430 PF18381 YcaO cyclodehydratase C-terminal domain NRK99_RS12430 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NRK99_RS12435 PF01226 Formate/nitrite transporter NRK99_RS12440 PF01228 Glycine radical NRK99_RS12440 PF02901 Pyruvate formate lyase-like NRK99_RS12450 PF00202 Aminotransferase class-III NRK99_RS12455 PF00266 Aminotransferase class-V NRK99_RS12460 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS12460 PF07702 UTRA domain NRK99_RS12470 PF00005 ABC transporter NRK99_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS12480 PF01266 FAD dependent oxidoreductase NRK99_RS12485 PF03692 Putative zinc- or iron-chelating domain NRK99_RS12500 PF00549 CoA-ligase NRK99_RS12500 PF02629 CoA binding domain NRK99_RS12505 PF00549 CoA-ligase NRK99_RS12505 PF08442 ATP-grasp domain NRK99_RS12510 PF02817 e3 binding domain NRK99_RS12510 PF00364 Biotin-requiring enzyme NRK99_RS12510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRK99_RS12515 PF00676 Dehydrogenase E1 component NRK99_RS12515 PF16078 2-oxoglutarate dehydrogenase N-terminus NRK99_RS12515 PF02779 Transketolase, pyrimidine binding domain NRK99_RS12515 PF16870 2-oxoglutarate dehydrogenase C-terminal NRK99_RS12520 PF13085 2Fe-2S iron-sulfur cluster binding domain NRK99_RS12525 PF00890 FAD binding domain NRK99_RS12525 PF02910 Fumarate reductase flavoprotein C-term NRK99_RS12530 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRK99_RS12535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRK99_RS12540 PF00285 Citrate synthase, C-terminal domain NRK99_RS12555 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS12555 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS12560 PF01266 FAD dependent oxidoreductase NRK99_RS12560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NRK99_RS12570 PF03606 C4-dicarboxylate anaerobic carrier NRK99_RS12585 PF01863 Protein of unknown function DUF45 NRK99_RS12600 PF01197 Ribosomal protein L31 NRK99_RS12605 PF00444 Ribosomal protein L36 NRK99_RS12610 PF02678 Pirin NRK99_RS12610 PF05726 Pirin C-terminal cupin domain NRK99_RS12615 PF03466 LysR substrate binding domain NRK99_RS12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS12620 PF08411 Exonuclease C-terminal NRK99_RS12620 PF00929 Exonuclease NRK99_RS12635 PF03788 LrgA family NRK99_RS12640 PF04172 LrgB-like family NRK99_RS12645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRK99_RS12645 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NRK99_RS12650 PF00501 AMP-binding enzyme NRK99_RS12655 PF08891 YfcL protein NRK99_RS12665 PF03741 Integral membrane protein TerC family NRK99_RS12670 PF00691 OmpA family NRK99_RS12675 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS12675 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS12675 PF00563 EAL domain NRK99_RS12680 PF13689 YfiR/HmsC-like NRK99_RS12685 PF18024 Helix-turn-helix domain NRK99_RS12685 PF00158 Sigma-54 interaction domain NRK99_RS12695 PF01329 Pterin 4 alpha carbinolamine dehydratase NRK99_RS12700 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NRK99_RS12705 PF05128 Domain of unknown function (DUF697) NRK99_RS12710 PF04317 YcjX-like family, DUF463 NRK99_RS12720 PF06667 Phage shock protein B NRK99_RS12725 PF04012 PspA/IM30 family NRK99_RS12730 PF02954 Bacterial regulatory protein, Fis family NRK99_RS12730 PF00158 Sigma-54 interaction domain NRK99_RS12735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS12740 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS12745 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS12750 PF00005 ABC transporter NRK99_RS12750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS12755 PF00005 ABC transporter NRK99_RS12760 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NRK99_RS12765 PF00156 Phosphoribosyl transferase domain NRK99_RS12770 PF02674 Colicin V production protein NRK99_RS12775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRK99_RS12775 PF02403 Seryl-tRNA synthetase N-terminal domain NRK99_RS12780 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS12780 PF16193 AAA C-terminal domain NRK99_RS12780 PF12002 MgsA AAA+ ATPase C terminal NRK99_RS12785 PF03548 Outer membrane lipoprotein carrier protein LolA NRK99_RS12790 PF01580 FtsK/SpoIIIE family NRK99_RS12790 PF09397 Ftsk gamma domain NRK99_RS12790 PF17854 FtsK alpha domain NRK99_RS12790 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NRK99_RS12795 PF01037 Lrp/AsnC ligand binding domain NRK99_RS12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS12805 PF17158 Membrane-associated sensor, integral membrane domain NRK99_RS12805 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS12810 PF05433 Glycine zipper 2TM domain NRK99_RS12815 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NRK99_RS12820 PF04377 Arginine-tRNA-protein transferase, C terminus NRK99_RS12820 PF04376 Arginine-tRNA-protein transferase, N terminus NRK99_RS12825 PF01176 Translation initiation factor 1A / IF-1 NRK99_RS12830 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS12830 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS12830 PF17871 AAA lid domain NRK99_RS12830 PF02861 Clp amino terminal domain, pathogenicity island component NRK99_RS12830 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS12835 PF02617 ATP-dependent Clp protease adaptor protein ClpS NRK99_RS12840 PF00313 'Cold-shock' DNA-binding domain NRK99_RS12845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NRK99_RS12845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NRK99_RS12895 PF04717 Type VI secretion system, phage-baseplate injector NRK99_RS12910 PF06744 Type VI secretion protein IcmF C-terminal NRK99_RS12910 PF14331 ImcF-related N-terminal domain NRK99_RS12910 PF06761 Intracellular multiplication and human macrophage-killing NRK99_RS12925 PF00158 Sigma-54 interaction domain NRK99_RS12925 PF02954 Bacterial regulatory protein, Fis family NRK99_RS12930 PF17871 AAA lid domain NRK99_RS12930 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS12930 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS12930 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS12940 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NRK99_RS12960 PF05947 Type VI secretion system, TssF NRK99_RS12970 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NRK99_RS12995 PF03527 RHS protein NRK99_RS12995 PF05593 RHS Repeat NRK99_RS13005 PF04717 Type VI secretion system, phage-baseplate injector NRK99_RS13010 PF05638 Type VI secretion system effector, Hcp NRK99_RS13020 PF10722 Putative bacterial sensory transduction regulator NRK99_RS13030 PF00265 Thymidine kinase NRK99_RS13035 PF03553 Na+/H+ antiporter family NRK99_RS13040 PF00816 H-NS histone family NRK99_RS13045 PF01923 Cobalamin adenosyltransferase NRK99_RS13050 PF12843 Putative quorum-sensing-regulated virulence factor NRK99_RS13055 PF04055 Radical SAM superfamily NRK99_RS13060 PF06508 Queuosine biosynthesis protein QueC NRK99_RS13075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NRK99_RS13080 PF18073 Rubredoxin metal binding domain NRK99_RS13090 PF00216 Bacterial DNA-binding protein NRK99_RS13095 PF00575 S1 RNA binding domain NRK99_RS13100 PF02224 Cytidylate kinase NRK99_RS13105 PF00925 GTP cyclohydrolase II NRK99_RS13120 PF03466 LysR substrate binding domain NRK99_RS13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS13125 PF03466 LysR substrate binding domain NRK99_RS13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS13130 PF07690 Major Facilitator Superfamily NRK99_RS13145 PF00881 Nitroreductase family NRK99_RS13150 PF13188 PAS domain NRK99_RS13150 PF00563 EAL domain NRK99_RS13150 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS13150 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS13160 PF03466 LysR substrate binding domain NRK99_RS13160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS13165 PF00072 Response regulator receiver domain NRK99_RS13175 PF01212 Beta-eliminating lyase NRK99_RS13190 PF00248 Aldo/keto reductase family NRK99_RS13195 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NRK99_RS13205 PF03411 Penicillin-insensitive murein endopeptidase NRK99_RS13215 PF04536 TPM domain NRK99_RS13240 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS13245 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRK99_RS13245 PF00691 OmpA family NRK99_RS13250 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NRK99_RS13255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRK99_RS13260 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRK99_RS13260 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRK99_RS13270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRK99_RS13270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRK99_RS13275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRK99_RS13275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRK99_RS13275 PF00384 Molybdopterin oxidoreductase NRK99_RS13280 PF00146 NADH dehydrogenase NRK99_RS13285 PF12838 4Fe-4S dicluster domain NRK99_RS13290 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NRK99_RS13295 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NRK99_RS13300 PF00361 Proton-conducting membrane transporter NRK99_RS13300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NRK99_RS13305 PF00361 Proton-conducting membrane transporter NRK99_RS13310 PF00361 Proton-conducting membrane transporter NRK99_RS13320 PF00072 Response regulator receiver domain NRK99_RS13325 PF01966 HD domain NRK99_RS13330 PF02769 AIR synthase related protein, C-terminal domain NRK99_RS13330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NRK99_RS13330 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NRK99_RS13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS13335 PF01464 Transglycosylase SLT domain NRK99_RS13340 PF07191 zinc-ribbons NRK99_RS13345 PF01926 50S ribosome-binding GTPase NRK99_RS13345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NRK99_RS13350 PF13360 PQQ-like domain NRK99_RS13355 PF09976 Tetratricopeptide repeat-like domain NRK99_RS13360 PF03129 Anticodon binding domain NRK99_RS13360 PF13393 Histidyl-tRNA synthetase NRK99_RS13365 PF04551 GcpE protein NRK99_RS13370 PF13464 Domain of unknown function (DUF4115) NRK99_RS13380 PF04055 Radical SAM superfamily NRK99_RS13385 PF00334 Nucleoside diphosphate kinase NRK99_RS13390 PF12404 Peptidase NRK99_RS13390 PF00883 Cytosol aminopeptidase family, catalytic domain NRK99_RS13395 PF00883 Cytosol aminopeptidase family, catalytic domain NRK99_RS13395 PF12404 Peptidase NRK99_RS13400 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS13405 PF00012 Hsp70 protein NRK99_RS13410 PF07743 HSCB C-terminal oligomerisation domain NRK99_RS13415 PF01521 Iron-sulphur cluster biosynthesis NRK99_RS13420 PF01592 NifU-like N terminal domain NRK99_RS13425 PF00266 Aminotransferase class-V NRK99_RS13430 PF02082 Transcriptional regulator NRK99_RS13435 PF00588 SpoU rRNA Methylase family NRK99_RS13445 PF02036 SCP-2 sterol transfer family NRK99_RS13450 PF01136 Peptidase family U32 NRK99_RS13455 PF01136 Peptidase family U32 NRK99_RS13460 PF13181 Tetratricopeptide repeat NRK99_RS13460 PF07719 Tetratricopeptide repeat NRK99_RS13470 PF07549 SecD/SecF GG Motif NRK99_RS13470 PF02355 Protein export membrane protein NRK99_RS13475 PF07549 SecD/SecF GG Motif NRK99_RS13475 PF13721 SecD export protein N-terminal TM region NRK99_RS13475 PF02355 Protein export membrane protein NRK99_RS13480 PF02699 Preprotein translocase subunit NRK99_RS13485 PF01702 Queuine tRNA-ribosyltransferase NRK99_RS13490 PF02547 Queuosine biosynthesis protein NRK99_RS13495 PF00571 CBS domain NRK99_RS13500 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRK99_RS13500 PF00578 AhpC/TSA family NRK99_RS13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS13505 PF13192 Thioredoxin domain NRK99_RS13510 PF07690 Major Facilitator Superfamily NRK99_RS13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS13515 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS13515 PF00989 PAS fold NRK99_RS13525 PF08241 Methyltransferase domain NRK99_RS13530 PF00884 Sulfatase NRK99_RS13535 PF04055 Radical SAM superfamily NRK99_RS13535 PF13186 Iron-sulfur cluster-binding domain NRK99_RS13545 PF14490 Helix-hairpin-helix containing domain NRK99_RS13545 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NRK99_RS13545 PF13538 UvrD-like helicase C-terminal domain NRK99_RS13550 PF09722 Protein of unknown function (DUF2384) NRK99_RS13575 PF00665 Integrase core domain NRK99_RS13600 PF02347 Glycine cleavage system P-protein NRK99_RS13605 PF01597 Glycine cleavage H-protein NRK99_RS13610 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRK99_RS13610 PF01571 Aminomethyltransferase folate-binding domain NRK99_RS13615 PF01494 FAD binding domain NRK99_RS13620 PF01494 FAD binding domain NRK99_RS13625 PF03695 Uncharacterised protein family (UPF0149) NRK99_RS13630 PF05164 Cell division protein ZapA NRK99_RS13640 PF07690 Major Facilitator Superfamily NRK99_RS13645 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS13645 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS13655 PF00459 Inositol monophosphatase family NRK99_RS13660 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS13660 PF00672 HAMP domain NRK99_RS13665 PF02535 ZIP Zinc transporter NRK99_RS13675 PF01048 Phosphorylase superfamily NRK99_RS13685 PF01497 Periplasmic binding protein NRK99_RS13700 PF02561 Flagellar protein FliS NRK99_RS13705 PF02465 Flagellar hook-associated protein 2 N-terminus NRK99_RS13705 PF07195 Flagellar hook-associated protein 2 C-terminus NRK99_RS13705 PF07196 Flagellin hook IN motif NRK99_RS13715 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS13715 PF07196 Flagellin hook IN motif NRK99_RS13715 PF00700 Bacterial flagellin C-terminal helical region NRK99_RS13720 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS13720 PF00700 Bacterial flagellin C-terminal helical region NRK99_RS13720 PF07196 Flagellin hook IN motif NRK99_RS13725 PF03458 UPF0126 domain NRK99_RS13735 PF02926 THUMP domain NRK99_RS13735 PF02568 Thiamine biosynthesis protein (ThiI) NRK99_RS13750 PF10711 Hypothetical protein (DUF2513) NRK99_RS13765 PF02796 Helix-turn-helix domain of resolvase NRK99_RS13765 PF00239 Resolvase, N terminal domain NRK99_RS13790 PF06832 Penicillin-Binding Protein C-terminus Family NRK99_RS13790 PF00912 Transglycosylase NRK99_RS13790 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS13795 PF00207 Alpha-2-macroglobulin family NRK99_RS13795 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NRK99_RS13795 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NRK99_RS13795 PF17962 Bacterial macroglobulin domain 6 NRK99_RS13795 PF01835 MG2 domain NRK99_RS13795 PF07678 A-macroglobulin TED domain NRK99_RS13795 PF07703 Alpha-2-macroglobulin bait region domain NRK99_RS13795 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NRK99_RS13795 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NRK99_RS13800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRK99_RS13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS13805 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS13805 PF00563 EAL domain NRK99_RS13805 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS13810 PF04055 Radical SAM superfamily NRK99_RS13820 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS13830 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS13835 PF00005 ABC transporter NRK99_RS13840 PF03956 Lysine exporter LysO NRK99_RS13845 PF01979 Amidohydrolase family NRK99_RS13850 PF04336 Acyl carrier protein phosphodiesterase NRK99_RS13870 PF03960 ArsC family NRK99_RS13875 PF00578 AhpC/TSA family NRK99_RS13880 PF13181 Tetratricopeptide repeat NRK99_RS13880 PF01435 Peptidase family M48 NRK99_RS13885 PF01206 Sulfurtransferase TusA NRK99_RS13890 PF01594 AI-2E family transporter NRK99_RS13900 PF00561 alpha/beta hydrolase fold NRK99_RS13905 PF03976 Polyphosphate kinase 2 (PPK2) NRK99_RS13910 PF08402 TOBE domain NRK99_RS13910 PF00005 ABC transporter NRK99_RS13915 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS13920 PF14785 Maltose transport system permease protein MalF P2 domain NRK99_RS13920 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS13925 PF01547 Bacterial extracellular solute-binding protein NRK99_RS13930 PF04245 37-kD nucleoid-associated bacterial protein NRK99_RS13935 PF07208 Protein of unknown function (DUF1414) NRK99_RS13940 PF11893 Domain of unknown function (DUF3413) NRK99_RS13940 PF00884 Sulfatase NRK99_RS13945 PF00593 TonB dependent receptor NRK99_RS13945 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS13950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRK99_RS13950 PF00326 Prolyl oligopeptidase family NRK99_RS13970 PF03974 Ecotin NRK99_RS13975 PF04219 Protein of unknown function, DUF NRK99_RS13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS13980 PF03466 LysR substrate binding domain NRK99_RS13985 PF01817 Chorismate mutase type II NRK99_RS13985 PF02153 Prephenate dehydrogenase NRK99_RS13990 PF00793 DAHP synthetase I family NRK99_RS13995 PF03009 Glycerophosphoryl diester phosphodiesterase family NRK99_RS14000 PF01266 FAD dependent oxidoreductase NRK99_RS14000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NRK99_RS14010 PF00455 DeoR C terminal sensor domain NRK99_RS14010 PF08220 DeoR-like helix-turn-helix domain NRK99_RS14015 PF07690 Major Facilitator Superfamily NRK99_RS14020 PF00230 Major intrinsic protein NRK99_RS14025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRK99_RS14025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRK99_RS14030 PF02743 Cache domain NRK99_RS14030 PF00672 HAMP domain NRK99_RS14030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS14040 PF03466 LysR substrate binding domain NRK99_RS14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14070 PF00248 Aldo/keto reductase family NRK99_RS14075 PF07690 Major Facilitator Superfamily NRK99_RS14090 PF05114 Protein of unknown function (DUF692) NRK99_RS14110 PF02322 Cytochrome bd terminal oxidase subunit II NRK99_RS14115 PF01654 Cytochrome bd terminal oxidase subunit I NRK99_RS14120 PF00155 Aminotransferase class I and II NRK99_RS14120 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS14130 PF04391 Protein of unknown function (DUF533) NRK99_RS14135 PF00892 EamA-like transporter family NRK99_RS14150 PF10689 Protein of unknown function (DUF2496) NRK99_RS14160 PF07690 Major Facilitator Superfamily NRK99_RS14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14165 PF03466 LysR substrate binding domain NRK99_RS14175 PF07690 Major Facilitator Superfamily NRK99_RS14180 PF09102 Exotoxin A, targeting NRK99_RS14180 PF09009 Exotoxin A catalytic NRK99_RS14180 PF09101 Exotoxin A binding NRK99_RS14185 PF01479 S4 domain NRK99_RS14185 PF00849 RNA pseudouridylate synthase NRK99_RS14195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS14205 PF01844 HNH endonuclease NRK99_RS14210 PF00300 Histidine phosphatase superfamily (branch 1) NRK99_RS14215 PF13309 HTH domain NRK99_RS14215 PF08348 YheO-like PAS domain NRK99_RS14220 PF03313 Serine dehydratase alpha chain NRK99_RS14225 PF01042 Endoribonuclease L-PSP NRK99_RS14235 PF00672 HAMP domain NRK99_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14250 PF03466 LysR substrate binding domain NRK99_RS14255 PF00753 Metallo-beta-lactamase superfamily NRK99_RS14255 PF14864 Alkyl sulfatase C-terminal NRK99_RS14255 PF14863 Alkyl sulfatase dimerisation NRK99_RS14265 PF17944 Arginine decarboxylase C-terminal helical extension NRK99_RS14265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRK99_RS14265 PF17810 Arginine decarboxylase helical bundle domain NRK99_RS14275 PF07687 Peptidase dimerisation domain NRK99_RS14275 PF01546 Peptidase family M20/M25/M40 NRK99_RS14300 PF04264 YceI-like domain NRK99_RS14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14305 PF03466 LysR substrate binding domain NRK99_RS14315 PF01268 Formate--tetrahydrofolate ligase NRK99_RS14320 PF00672 HAMP domain NRK99_RS14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS14320 PF17200 Single Cache domain 2 NRK99_RS14325 PF01227 GTP cyclohydrolase I NRK99_RS14330 PF00994 Probable molybdopterin binding domain NRK99_RS14330 PF03454 MoeA C-terminal region (domain IV) NRK99_RS14330 PF03453 MoeA N-terminal region (domain I and II) NRK99_RS14335 PF00899 ThiF family NRK99_RS14340 PF06291 Bor protein NRK99_RS14345 PF06291 Bor protein NRK99_RS14355 PF06406 StbA protein NRK99_RS14360 PF00561 alpha/beta hydrolase fold NRK99_RS14365 PF00005 ABC transporter NRK99_RS14365 PF03459 TOBE domain NRK99_RS14370 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS14380 PF02391 MoaE protein NRK99_RS14385 PF02597 ThiS family NRK99_RS14390 PF01967 MoaC family NRK99_RS14395 PF00994 Probable molybdopterin binding domain NRK99_RS14400 PF03264 NapC/NirT cytochrome c family, N-terminal region NRK99_RS14405 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NRK99_RS14410 PF13237 4Fe-4S dicluster domain NRK99_RS14410 PF12801 4Fe-4S binding domain NRK99_RS14415 PF12838 4Fe-4S dicluster domain NRK99_RS14415 PF12800 4Fe-4S binding domain NRK99_RS14420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRK99_RS14420 PF01568 Molydopterin dinucleotide binding domain NRK99_RS14420 PF10518 TAT (twin-arginine translocation) pathway signal sequence NRK99_RS14420 PF00384 Molybdopterin oxidoreductase NRK99_RS14430 PF13187 4Fe-4S dicluster domain NRK99_RS14430 PF12800 4Fe-4S binding domain NRK99_RS14430 PF00037 4Fe-4S binding domain NRK99_RS14435 PF06463 Molybdenum Cofactor Synthesis C NRK99_RS14435 PF04055 Radical SAM superfamily NRK99_RS14440 PF00672 HAMP domain NRK99_RS14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS14440 PF07730 Histidine kinase NRK99_RS14440 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NRK99_RS14445 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS14445 PF00072 Response regulator receiver domain NRK99_RS14455 PF09456 RcsC Alpha-Beta-Loop (ABL) NRK99_RS14455 PF00072 Response regulator receiver domain NRK99_RS14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS14455 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS14465 PF01933 Uncharacterised protein family UPF0052 NRK99_RS14475 PF13230 Glutamine amidotransferases class-II NRK99_RS14480 PF13580 SIS domain NRK99_RS14485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRK99_RS14485 PF02770 Acyl-CoA dehydrogenase, middle domain NRK99_RS14485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRK99_RS14485 PF09317 Domain of unknown function (DUF1974) NRK99_RS14490 PF11849 Domain of unknown function (DUF3369) NRK99_RS14500 PF00929 Exonuclease NRK99_RS14505 PF00075 RNase H NRK99_RS14510 PF08241 Methyltransferase domain NRK99_RS14515 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRK99_RS14515 PF00753 Metallo-beta-lactamase superfamily NRK99_RS14520 PF01476 LysM domain NRK99_RS14520 PF01464 Transglycosylase SLT domain NRK99_RS14525 PF03372 Endonuclease/Exonuclease/phosphatase family NRK99_RS14535 PF03061 Thioesterase superfamily NRK99_RS14545 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS14550 PF01464 Transglycosylase SLT domain NRK99_RS14550 PF14718 Soluble lytic murein transglycosylase L domain NRK99_RS14555 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS14555 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS14555 PF00563 EAL domain NRK99_RS14560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRK99_RS14580 PF04357 TamB, inner membrane protein subunit of TAM complex NRK99_RS14585 PF17243 POTRA domain TamA domain 1 NRK99_RS14585 PF01103 Surface antigen NRK99_RS14585 PF07244 Surface antigen variable number repeat NRK99_RS14600 PF01625 Peptide methionine sulfoxide reductase NRK99_RS14610 PF02627 Carboxymuconolactone decarboxylase family NRK99_RS14615 PF00403 Heavy-metal-associated domain NRK99_RS14615 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS14615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRK99_RS14620 PF13416 Bacterial extracellular solute-binding protein NRK99_RS14630 PF00005 ABC transporter NRK99_RS14635 PF01066 CDP-alcohol phosphatidyltransferase NRK99_RS14640 PF13406 Transglycosylase SLT domain NRK99_RS14655 PF01047 MarR family NRK99_RS14665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRK99_RS14665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRK99_RS14665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRK99_RS14665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRK99_RS14670 PF03925 SeqA protein C-terminal domain NRK99_RS14670 PF17206 SeqA protein N-terminal domain NRK99_RS14675 PF12697 Alpha/beta hydrolase family NRK99_RS14685 PF01402 Ribbon-helix-helix protein, copG family NRK99_RS14690 PF00258 Flavodoxin NRK99_RS14700 PF01475 Ferric uptake regulator family NRK99_RS14705 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRK99_RS14705 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NRK99_RS14710 PF03173 Putative carbohydrate binding domain NRK99_RS14710 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NRK99_RS14710 PF00728 Glycosyl hydrolase family 20, catalytic domain NRK99_RS14710 PF02838 Glycosyl hydrolase family 20, domain 2 NRK99_RS14715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRK99_RS14715 PF00367 phosphotransferase system, EIIB NRK99_RS14715 PF02378 Phosphotransferase system, EIIC NRK99_RS14720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NRK99_RS14725 PF01979 Amidohydrolase family NRK99_RS14730 PF00480 ROK family NRK99_RS14730 PF01047 MarR family NRK99_RS14735 PF00884 Sulfatase NRK99_RS14735 PF08019 Phosphoethanolamine transferase EptA/EptB NRK99_RS14740 PF01709 Transcriptional regulator NRK99_RS14745 PF02938 GAD domain NRK99_RS14745 PF00152 tRNA synthetases class II (D, K and N) NRK99_RS14745 PF01336 OB-fold nucleic acid binding domain NRK99_RS14750 PF01904 Protein of unknown function DUF72 NRK99_RS14755 PF13649 Methyltransferase domain NRK99_RS14760 PF08003 Protein of unknown function (DUF1698) NRK99_RS14780 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRK99_RS14780 PF00578 AhpC/TSA family NRK99_RS14785 PF03466 LysR substrate binding domain NRK99_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14790 PF12563 Hemolytic toxin N terminal NRK99_RS14790 PF07968 Leukocidin/Hemolysin toxin family NRK99_RS14795 PF00877 NlpC/P60 family NRK99_RS14805 PF00171 Aldehyde dehydrogenase family NRK99_RS14810 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS14810 PF08359 YsiA-like protein, C-terminal region NRK99_RS14820 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS14830 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS14850 PF01554 MatE NRK99_RS14860 PF04325 Protein of unknown function (DUF465) NRK99_RS14865 PF12833 Helix-turn-helix domain NRK99_RS14865 PF02311 AraC-like ligand binding domain NRK99_RS14870 PF01804 Penicillin amidase NRK99_RS14875 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRK99_RS14875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS14875 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRK99_RS14875 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRK99_RS14875 PF10371 Domain of unknown function NRK99_RS14880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRK99_RS14880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRK99_RS14880 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS14885 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS14885 PF03473 MOSC domain NRK99_RS14885 PF03476 MOSC N-terminal beta barrel domain NRK99_RS14885 PF03476 MOSC N-terminal beta barrel domain NRK99_RS14885 PF00111 2Fe-2S iron-sulfur cluster binding domain NRK99_RS14885 PF03473 MOSC domain NRK99_RS14890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS14890 PF08447 PAS fold NRK99_RS14890 PF13426 PAS domain NRK99_RS14895 PF01435 Peptidase family M48 NRK99_RS14905 PF12697 Alpha/beta hydrolase family NRK99_RS14905 PF08241 Methyltransferase domain NRK99_RS14910 PF00155 Aminotransferase class I and II NRK99_RS14915 PF06968 Biotin and Thiamin Synthesis associated domain NRK99_RS14915 PF04055 Radical SAM superfamily NRK99_RS14920 PF00202 Aminotransferase class-III NRK99_RS14935 PF01336 OB-fold nucleic acid binding domain NRK99_RS14935 PF00152 tRNA synthetases class II (D, K and N) NRK99_RS14940 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRK99_RS14950 PF07687 Peptidase dimerisation domain NRK99_RS14950 PF01546 Peptidase family M20/M25/M40 NRK99_RS14955 PF03606 C4-dicarboxylate anaerobic carrier NRK99_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS14965 PF03466 LysR substrate binding domain NRK99_RS14970 PF03960 ArsC family NRK99_RS14975 PF07687 Peptidase dimerisation domain NRK99_RS14975 PF01546 Peptidase family M20/M25/M40 NRK99_RS14980 PF02557 D-alanyl-D-alanine carboxypeptidase NRK99_RS14990 PF02080 TrkA-C domain NRK99_RS14990 PF03471 Transporter associated domain NRK99_RS14990 PF00999 Sodium/hydrogen exchanger family NRK99_RS15000 PF03471 Transporter associated domain NRK99_RS15000 PF00999 Sodium/hydrogen exchanger family NRK99_RS15000 PF02080 TrkA-C domain NRK99_RS15010 PF01810 LysE type translocator NRK99_RS15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS15015 PF00672 HAMP domain NRK99_RS15015 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS15020 PF07509 Protein of unknown function (DUF1523) NRK99_RS15035 PF01156 Inosine-uridine preferring nucleoside hydrolase NRK99_RS15040 PF00849 RNA pseudouridylate synthase NRK99_RS15045 PF01048 Phosphorylase superfamily NRK99_RS15050 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS15055 PF04355 SmpA / OmlA family NRK99_RS15060 PF13460 NAD(P)H-binding NRK99_RS15065 PF03658 RnfH family Ubiquitin NRK99_RS15070 PF03364 Polyketide cyclase / dehydrase and lipid transport NRK99_RS15075 PF01668 SmpB protein NRK99_RS15085 PF04851 Type III restriction enzyme, res subunit NRK99_RS15085 PF00271 Helicase conserved C-terminal domain NRK99_RS15085 PF08463 EcoEI R protein C-terminal NRK99_RS15085 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NRK99_RS15090 PF12161 HsdM N-terminal domain NRK99_RS15090 PF02384 N-6 DNA Methylase NRK99_RS15095 PF01420 Type I restriction modification DNA specificity domain NRK99_RS15125 PF03466 LysR substrate binding domain NRK99_RS15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS15130 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS15140 PF01740 STAS domain NRK99_RS15140 PF00916 Sulfate permease family NRK99_RS15145 PF00180 Isocitrate/isopropylmalate dehydrogenase NRK99_RS15150 PF12833 Helix-turn-helix domain NRK99_RS15155 PF01238 Phosphomannose isomerase type I NRK99_RS15185 PF00155 Aminotransferase class I and II NRK99_RS15190 PF00367 phosphotransferase system, EIIB NRK99_RS15190 PF02378 Phosphotransferase system, EIIC NRK99_RS15195 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS15195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRK99_RS15205 PF00583 Acetyltransferase (GNAT) family NRK99_RS15220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS15220 PF02378 Phosphotransferase system, EIIC NRK99_RS15220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRK99_RS15225 PF07690 Major Facilitator Superfamily NRK99_RS15230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS15230 PF02378 Phosphotransferase system, EIIC NRK99_RS15230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRK99_RS15240 PF00849 RNA pseudouridylate synthase NRK99_RS15245 PF00293 NUDIX domain NRK99_RS15255 PF04356 Protein of unknown function (DUF489) NRK99_RS15260 PF00206 Lyase NRK99_RS15260 PF08328 Adenylosuccinate lyase C-terminal NRK99_RS15265 PF08007 Cupin superfamily protein NRK99_RS15280 PF13508 Acetyltransferase (GNAT) domain NRK99_RS15290 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS15290 PF13417 Glutathione S-transferase, N-terminal domain NRK99_RS15295 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NRK99_RS15295 PF01243 Pyridoxamine 5'-phosphate oxidase NRK99_RS15310 PF01189 16S rRNA methyltransferase RsmB/F NRK99_RS15310 PF01029 NusB family NRK99_RS15315 PF00462 Glutaredoxin NRK99_RS15320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRK99_RS15320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRK99_RS15325 PF04333 MlaA lipoprotein NRK99_RS15335 PF03918 Cytochrome C biogenesis protein NRK99_RS15340 PF08534 Redoxin NRK99_RS15345 PF01578 Cytochrome C assembly protein NRK99_RS15345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRK99_RS15350 PF03100 CcmE NRK99_RS15355 PF04995 Heme exporter protein D (CcmD) NRK99_RS15360 PF01578 Cytochrome C assembly protein NRK99_RS15365 PF03379 CcmB protein NRK99_RS15370 PF00005 ABC transporter NRK99_RS15380 PF01584 CheW-like domain NRK99_RS15390 PF13614 AAA domain NRK99_RS15395 PF00691 OmpA family NRK99_RS15395 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRK99_RS15400 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS15405 PF01339 CheB methylesterase NRK99_RS15405 PF00072 Response regulator receiver domain NRK99_RS15410 PF01627 Hpt domain NRK99_RS15410 PF00072 Response regulator receiver domain NRK99_RS15410 PF02895 Signal transducing histidine kinase, homodimeric domain NRK99_RS15410 PF01584 CheW-like domain NRK99_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS15415 PF04344 Chemotaxis phosphatase, CheZ NRK99_RS15420 PF00072 Response regulator receiver domain NRK99_RS15425 PF04545 Sigma-70, region 4 NRK99_RS15425 PF04539 Sigma-70 region 3 NRK99_RS15425 PF04542 Sigma-70 region 2 NRK99_RS15430 PF10609 NUBPL iron-transfer P-loop NTPase NRK99_RS15435 PF00448 SRP54-type protein, GTPase domain NRK99_RS15440 PF00771 FHIPEP family NRK99_RS15445 PF01312 FlhB HrpN YscU SpaS Family NRK99_RS15450 PF01311 Bacterial export proteins, family 1 NRK99_RS15455 PF01313 Bacterial export proteins, family 3 NRK99_RS15460 PF00813 FliP family NRK99_RS15465 PF04347 Flagellar biosynthesis protein, FliO NRK99_RS15470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRK99_RS15475 PF02154 Flagellar motor switch protein FliM NRK99_RS15475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRK99_RS15495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS15495 PF18269 T3SS EscN ATPase C-terminal domain NRK99_RS15505 PF01706 FliG C-terminal domain NRK99_RS15505 PF14841 FliG middle domain NRK99_RS15505 PF14842 FliG N-terminal domain NRK99_RS15510 PF08345 Flagellar M-ring protein C-terminal NRK99_RS15510 PF01514 Secretory protein of YscJ/FliF family NRK99_RS15515 PF02049 Flagellar hook-basal body complex protein FliE NRK99_RS15530 PF03960 ArsC family NRK99_RS15535 PF01758 Sodium Bile acid symporter family NRK99_RS15540 PF02374 Anion-transporting ATPase NRK99_RS15545 PF06953 Arsenical resistance operon trans-acting repressor ArsD NRK99_RS15550 PF01022 Bacterial regulatory protein, arsR family NRK99_RS15555 PF02001 Protein of unknown function DUF134 NRK99_RS15565 PF00072 Response regulator receiver domain NRK99_RS15570 PF04055 Radical SAM superfamily NRK99_RS15570 PF18693 TRAM domain NRK99_RS15570 PF00919 Uncharacterized protein family UPF0004 NRK99_RS15575 PF00072 Response regulator receiver domain NRK99_RS15575 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS15585 PF02685 Glucokinase NRK99_RS15590 PF01418 Helix-turn-helix domain, rpiR family NRK99_RS15590 PF01380 SIS domain NRK99_RS15595 PF00224 Pyruvate kinase, barrel domain NRK99_RS15595 PF02887 Pyruvate kinase, alpha/beta domain NRK99_RS15605 PF00873 AcrB/AcrD/AcrF family NRK99_RS15610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRK99_RS15610 PF09317 Domain of unknown function (DUF1974) NRK99_RS15610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRK99_RS15610 PF02770 Acyl-CoA dehydrogenase, middle domain NRK99_RS15615 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS15630 PF00384 Molybdopterin oxidoreductase NRK99_RS15635 PF02634 FdhD/NarQ family NRK99_RS15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS15640 PF03466 LysR substrate binding domain NRK99_RS15660 PF00936 BMC domain NRK99_RS15665 PF00936 BMC domain NRK99_RS15670 PF00936 BMC domain NRK99_RS15675 PF00171 Aldehyde dehydrogenase family NRK99_RS15675 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS15685 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS15685 PF00171 Aldehyde dehydrogenase family NRK99_RS15690 PF02901 Pyruvate formate lyase-like NRK99_RS15690 PF01228 Glycine radical NRK99_RS15695 PF04055 Radical SAM superfamily NRK99_RS15695 PF13187 4Fe-4S dicluster domain NRK99_RS15700 PF00936 BMC domain NRK99_RS15705 PF06130 Phosphate propanoyltransferase NRK99_RS15715 PF00893 Small Multidrug Resistance protein NRK99_RS15720 PF00893 Small Multidrug Resistance protein NRK99_RS15725 PF13426 PAS domain NRK99_RS15725 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS15725 PF00672 HAMP domain NRK99_RS15730 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS15730 PF00072 Response regulator receiver domain NRK99_RS15735 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS15735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS15740 PF00873 AcrB/AcrD/AcrF family NRK99_RS15745 PF07690 Major Facilitator Superfamily NRK99_RS15760 PF01476 LysM domain NRK99_RS15760 PF17969 L,D-transpeptidase C-terminal domain NRK99_RS15760 PF03734 L,D-transpeptidase catalytic domain NRK99_RS15770 PF01575 MaoC like domain NRK99_RS15775 PF05971 RNA methyltransferase NRK99_RS15780 PF00877 NlpC/P60 family NRK99_RS15785 PF01648 4'-phosphopantetheinyl transferase superfamily NRK99_RS15790 PF00085 Thioredoxin NRK99_RS15800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRK99_RS15805 PF01842 ACT domain NRK99_RS15805 PF00551 Formyl transferase NRK99_RS15815 PF13091 PLD-like domain NRK99_RS15815 PF13396 Phospholipase_D-nuclease N-terminal NRK99_RS15830 PF01551 Peptidase family M23 NRK99_RS15835 PF00128 Alpha amylase, catalytic domain NRK99_RS15840 PF10145 Phage-related minor tail protein NRK99_RS15840 PF01464 Transglycosylase SLT domain NRK99_RS15840 PF01551 Peptidase family M23 NRK99_RS15845 PF00230 Major intrinsic protein NRK99_RS15850 PF02075 Crossover junction endodeoxyribonuclease RuvC NRK99_RS15855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRK99_RS15910 PF08497 Radical SAM N-terminal NRK99_RS15910 PF04055 Radical SAM superfamily NRK99_RS15910 PF11842 Domain of unknown function (DUF3362) NRK99_RS15920 PF00873 AcrB/AcrD/AcrF family NRK99_RS15925 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS15930 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS15935 PF01734 Patatin-like phospholipase NRK99_RS15940 PF00209 Sodium:neurotransmitter symporter family NRK99_RS15955 PF01389 OmpA-like transmembrane domain NRK99_RS15955 PF00691 OmpA family NRK99_RS15960 PF00691 OmpA family NRK99_RS15960 PF01389 OmpA-like transmembrane domain NRK99_RS15965 PF00691 OmpA family NRK99_RS15965 PF01389 OmpA-like transmembrane domain NRK99_RS15970 PF00390 Malic enzyme, N-terminal domain NRK99_RS15970 PF03949 Malic enzyme, NAD binding domain NRK99_RS15975 PF06719 AraC-type transcriptional regulator N-terminus NRK99_RS15975 PF12833 Helix-turn-helix domain NRK99_RS15980 PF01554 MatE NRK99_RS15985 PF10692 Protein of unknown function (DUF2498) NRK99_RS15990 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS15990 PF00072 Response regulator receiver domain NRK99_RS15995 PF00860 Permease family NRK99_RS16010 PF04829 Pre-toxin domain with VENN motif NRK99_RS16010 PF15526 Novel toxin 21 NRK99_RS16010 PF05860 haemagglutination activity domain NRK99_RS16010 PF13332 Hemagglutinin repeat NRK99_RS16010 PF05594 Haemagluttinin repeat NRK99_RS16010 PF04829 Pre-toxin domain with VENN motif NRK99_RS16010 PF15526 Novel toxin 21 NRK99_RS16010 PF05860 haemagglutination activity domain NRK99_RS16010 PF05594 Haemagluttinin repeat NRK99_RS16010 PF13332 Hemagglutinin repeat NRK99_RS16015 PF17287 POTRA domain NRK99_RS16015 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NRK99_RS16015 PF08479 POTRA domain, ShlB-type NRK99_RS16020 PF01235 Sodium:alanine symporter family NRK99_RS16025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRK99_RS16025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRK99_RS16030 PF01699 Sodium/calcium exchanger protein NRK99_RS16035 PF08534 Redoxin NRK99_RS16045 PF00293 NUDIX domain NRK99_RS16055 PF00005 ABC transporter NRK99_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS16070 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS16085 PF00005 ABC transporter NRK99_RS16090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRK99_RS16090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRK99_RS16100 PF03932 CutC family NRK99_RS16105 PF00480 ROK family NRK99_RS16115 PF01435 Peptidase family M48 NRK99_RS16120 PF12849 PBP superfamily domain NRK99_RS16125 PF11808 Phosphate regulon sensor protein PhoR NRK99_RS16125 PF00989 PAS fold NRK99_RS16125 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS16130 PF00072 Response regulator receiver domain NRK99_RS16130 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS16135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS16140 PF02515 CoA-transferase family III NRK99_RS16145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRK99_RS16145 PF02770 Acyl-CoA dehydrogenase, middle domain NRK99_RS16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRK99_RS16150 PF00158 Sigma-54 interaction domain NRK99_RS16150 PF02954 Bacterial regulatory protein, Fis family NRK99_RS16150 PF01590 GAF domain NRK99_RS16155 PF00171 Aldehyde dehydrogenase family NRK99_RS16165 PF00892 EamA-like transporter family NRK99_RS16170 PF12431 Transcriptional regulator NRK99_RS16170 PF00072 Response regulator receiver domain NRK99_RS16175 PF17203 Single cache domain 3 NRK99_RS16175 PF00989 PAS fold NRK99_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS16175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRK99_RS16180 PF03949 Malic enzyme, NAD binding domain NRK99_RS16180 PF00390 Malic enzyme, N-terminal domain NRK99_RS16185 PF03390 2-hydroxycarboxylate transporter family NRK99_RS16195 PF01047 MarR family NRK99_RS16200 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS16200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS16225 PF01679 Proteolipid membrane potential modulator NRK99_RS16235 PF03477 ATP cone domain NRK99_RS16235 PF13597 Anaerobic ribonucleoside-triphosphate reductase NRK99_RS16245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NRK99_RS16245 PF01653 NAD-dependent DNA ligase adenylation domain NRK99_RS16245 PF00533 BRCA1 C Terminus (BRCT) domain NRK99_RS16245 PF03120 NAD-dependent DNA ligase OB-fold domain NRK99_RS16245 PF12826 Helix-hairpin-helix motif NRK99_RS16250 PF04354 ZipA, C-terminal FtsZ-binding domain NRK99_RS16255 PF02463 RecF/RecN/SMC N terminal domain NRK99_RS16255 PF06470 SMC proteins Flexible Hinge Domain NRK99_RS16265 PF03458 UPF0126 domain NRK99_RS16275 PF05951 Bacterial protein of unknown function (DUF882) NRK99_RS16280 PF01471 Putative peptidoglycan binding domain NRK99_RS16280 PF03734 L,D-transpeptidase catalytic domain NRK99_RS16295 PF00535 Glycosyl transferase family 2 NRK99_RS16310 PF00128 Alpha amylase, catalytic domain NRK99_RS16320 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS16320 PF00072 Response regulator receiver domain NRK99_RS16340 PF02254 TrkA-N domain NRK99_RS16340 PF02080 TrkA-C domain NRK99_RS16340 PF00999 Sodium/hydrogen exchanger family NRK99_RS16345 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS16350 PF01171 PP-loop family NRK99_RS16350 PF09179 TilS substrate binding domain NRK99_RS16350 PF11734 TilS substrate C-terminal domain NRK99_RS16355 PF01431 Peptidase family M13 NRK99_RS16355 PF05649 Peptidase family M13 NRK99_RS16365 PF02086 D12 class N6 adenine-specific DNA methyltransferase NRK99_RS16375 PF01761 3-dehydroquinate synthase NRK99_RS16380 PF01202 Shikimate kinase NRK99_RS16385 PF07660 Secretin and TonB N terminus short domain NRK99_RS16385 PF11741 AMIN domain NRK99_RS16385 PF00263 Bacterial type II and III secretion system protein NRK99_RS16385 PF03958 Bacterial type II/III secretion system short domain NRK99_RS16395 PF04350 Pilus assembly protein, PilO NRK99_RS16405 PF11104 Type IV pilus assembly protein PilM; NRK99_RS16410 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS16410 PF17092 Penicillin-binding protein OB-like domain NRK99_RS16410 PF00912 Transglycosylase NRK99_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS16415 PF03466 LysR substrate binding domain NRK99_RS16420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS16420 PF00672 HAMP domain NRK99_RS16435 PF03466 LysR substrate binding domain NRK99_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS16450 PF01551 Peptidase family M23 NRK99_RS16450 PF01476 LysM domain NRK99_RS16450 PF08525 Opacity-associated protein A N-terminal motif NRK99_RS16460 PF12795 Mechanosensitive ion channel porin domain NRK99_RS16460 PF00924 Mechanosensitive ion channel NRK99_RS16460 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRK99_RS16465 PF03009 Glycerophosphoryl diester phosphodiesterase family NRK99_RS16470 PF00672 HAMP domain NRK99_RS16470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS16470 PF02743 Cache domain NRK99_RS16475 PF00890 FAD binding domain NRK99_RS16475 PF02910 Fumarate reductase flavoprotein C-term NRK99_RS16480 PF13085 2Fe-2S iron-sulfur cluster binding domain NRK99_RS16480 PF13183 4Fe-4S dicluster domain NRK99_RS16485 PF02300 Fumarate reductase subunit C NRK99_RS16490 PF02313 Fumarate reductase subunit D NRK99_RS16510 PF06224 Winged helix DNA-binding domain NRK99_RS16525 PF00501 AMP-binding enzyme NRK99_RS16545 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS16545 PF00072 Response regulator receiver domain NRK99_RS16550 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS16550 PF08521 Two-component sensor kinase N-terminal NRK99_RS16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS16570 PF00478 IMP dehydrogenase / GMP reductase domain NRK99_RS16580 PF09285 Elongation factor P, C-terminal NRK99_RS16580 PF08207 Elongation factor P (EF-P) KOW-like domain NRK99_RS16580 PF01132 Elongation factor P (EF-P) OB domain NRK99_RS16585 PF09997 Predicted membrane protein (DUF2238) NRK99_RS16595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRK99_RS16595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS16605 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS16615 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS16625 PF03466 LysR substrate binding domain NRK99_RS16630 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS16630 PF05230 MASE2 domain NRK99_RS16640 PF00857 Isochorismatase family NRK99_RS16645 PF01494 FAD binding domain NRK99_RS16650 PF04055 Radical SAM superfamily NRK99_RS16650 PF01938 TRAM domain NRK99_RS16650 PF00919 Uncharacterized protein family UPF0004 NRK99_RS16655 PF02562 PhoH-like protein NRK99_RS16660 PF02130 Uncharacterized protein family UPF0054 NRK99_RS16665 PF00571 CBS domain NRK99_RS16665 PF03471 Transporter associated domain NRK99_RS16670 PF00795 Carbon-nitrogen hydrolase NRK99_RS16675 PF07295 Zinc-ribbon containing domain NRK99_RS16680 PF08264 Anticodon-binding domain of tRNA NRK99_RS16680 PF00133 tRNA synthetases class I (I, L, M and V) NRK99_RS16680 PF13603 Leucyl-tRNA synthetase, Domain 2 NRK99_RS16695 PF01467 Cytidylyltransferase-like NRK99_RS16705 PF02590 Predicted SPOUT methyltransferase NRK99_RS16710 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS16710 PF03717 Penicillin-binding Protein dimerisation domain NRK99_RS16715 PF01098 Cell cycle protein NRK99_RS16720 PF13406 Transglycosylase SLT domain NRK99_RS16725 PF03330 Lytic transglycolase NRK99_RS16725 PF05036 Sporulation related domain NRK99_RS16730 PF07943 Penicillin-binding protein 5, C-terminal domain NRK99_RS16730 PF00768 D-alanyl-D-alanine carboxypeptidase NRK99_RS16735 PF04359 Protein of unknown function (DUF493) NRK99_RS16740 PF03099 Biotin/lipoate A/B protein ligase family NRK99_RS16745 PF04055 Radical SAM superfamily NRK99_RS16745 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NRK99_RS16750 PF06821 Serine hydrolase NRK99_RS16755 PF02508 Rnf-Nqr subunit, membrane protein NRK99_RS16770 PF13411 MerR HTH family regulatory protein NRK99_RS16775 PF01368 DHH family NRK99_RS16775 PF02272 DHHA1 domain NRK99_RS16775 PF17768 RecJ OB domain NRK99_RS16785 PF01741 Large-conductance mechanosensitive channel, MscL NRK99_RS16790 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS16795 PF02899 Phage integrase, N-terminal SAM-like domain NRK99_RS16795 PF00589 Phage integrase family NRK99_RS16800 PF00258 Flavodoxin NRK99_RS16805 PF01523 Putative modulator of DNA gyrase NRK99_RS16810 PF01523 Putative modulator of DNA gyrase NRK99_RS16820 PF17969 L,D-transpeptidase C-terminal domain NRK99_RS16820 PF03734 L,D-transpeptidase catalytic domain NRK99_RS16825 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NRK99_RS16830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRK99_RS16850 PF03575 Peptidase family S51 NRK99_RS16855 PF10415 Fumarase C C-terminus NRK99_RS16855 PF00206 Lyase NRK99_RS16865 PF02635 DsrE/DsrF-like family NRK99_RS16870 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS16875 PF07690 Major Facilitator Superfamily NRK99_RS16880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRK99_RS16880 PF01138 3' exoribonuclease family, domain 1 NRK99_RS16880 PF03725 3' exoribonuclease family, domain 2 NRK99_RS16880 PF00575 S1 RNA binding domain NRK99_RS16880 PF00013 KH domain NRK99_RS16885 PF00312 Ribosomal protein S15 NRK99_RS16890 PF01509 TruB family pseudouridylate synthase (N terminal domain) NRK99_RS16890 PF09157 Pseudouridine synthase II TruB, C-terminal NRK99_RS16890 PF16198 tRNA pseudouridylate synthase B C-terminal domain NRK99_RS16895 PF02033 Ribosome-binding factor A NRK99_RS16900 PF00009 Elongation factor Tu GTP binding domain NRK99_RS16900 PF11987 Translation-initiation factor 2 NRK99_RS16900 PF08364 Bacterial translation initiation factor IF-2 associated region NRK99_RS16900 PF04760 Translation initiation factor IF-2, N-terminal region NRK99_RS16905 PF13184 NusA-like KH domain NRK99_RS16905 PF08529 NusA N-terminal domain NRK99_RS16905 PF00575 S1 RNA binding domain NRK99_RS16910 PF02576 RimP N-terminal domain NRK99_RS16910 PF17384 RimP C-terminal SH3 domain NRK99_RS16925 PF03840 Preprotein translocase SecG subunit NRK99_RS16930 PF00121 Triosephosphate isomerase NRK99_RS16935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRK99_RS16935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRK99_RS16935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRK99_RS16935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRK99_RS16940 PF00809 Pterin binding enzyme NRK99_RS16945 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS16945 PF17862 AAA+ lid domain NRK99_RS16945 PF06480 FtsH Extracellular NRK99_RS16945 PF01434 Peptidase family M41 NRK99_RS16950 PF01728 FtsJ-like methyltransferase NRK99_RS16955 PF01985 CRS1 / YhbY (CRM) domain NRK99_RS16965 PF01272 Transcription elongation factor, GreA/GreB, C-term NRK99_RS16965 PF03449 Transcription elongation factor, N-terminal NRK99_RS16970 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRK99_RS16970 PF00691 OmpA family NRK99_RS16975 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS16980 PF02609 Exonuclease VII small subunit NRK99_RS16985 PF00348 Polyprenyl synthetase NRK99_RS16990 PF02780 Transketolase, C-terminal domain NRK99_RS16990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NRK99_RS16990 PF02779 Transketolase, pyrimidine binding domain NRK99_RS16995 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS16995 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS17005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS17010 PF00005 ABC transporter NRK99_RS17010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS17015 PF04608 Phosphatidylglycerophosphatase A NRK99_RS17020 PF00586 AIR synthase related protein, N-terminal domain NRK99_RS17020 PF02769 AIR synthase related protein, C-terminal domain NRK99_RS17025 PF01029 NusB family NRK99_RS17030 PF00885 6,7-dimethyl-8-ribityllumazine synthase NRK99_RS17035 PF00925 GTP cyclohydrolase II NRK99_RS17035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRK99_RS17040 PF00677 Lumazine binding domain NRK99_RS17045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRK99_RS17045 PF01872 RibD C-terminal domain NRK99_RS17050 PF03477 ATP cone domain NRK99_RS17065 PF00464 Serine hydroxymethyltransferase NRK99_RS17075 PF00072 Response regulator receiver domain NRK99_RS17075 PF01627 Hpt domain NRK99_RS17075 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS17075 PF00672 HAMP domain NRK99_RS17080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRK99_RS17090 PF00072 Response regulator receiver domain NRK99_RS17090 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS17095 PF03264 NapC/NirT cytochrome c family, N-terminal region NRK99_RS17100 PF18364 Molybdopterin oxidoreductase N-terminal domain NRK99_RS17100 PF01568 Molydopterin dinucleotide binding domain NRK99_RS17100 PF00384 Molybdopterin oxidoreductase NRK99_RS17105 PF02613 Nitrate reductase delta subunit NRK99_RS17125 PF00563 EAL domain NRK99_RS17125 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS17125 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS17125 PF13188 PAS domain NRK99_RS17135 PF16177 Acetyl-coenzyme A synthetase N-terminus NRK99_RS17135 PF00501 AMP-binding enzyme NRK99_RS17135 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS17140 PF01220 Dehydroquinase class II NRK99_RS17145 PF00364 Biotin-requiring enzyme NRK99_RS17150 PF02785 Biotin carboxylase C-terminal domain NRK99_RS17150 PF00289 Biotin carboxylase, N-terminal domain NRK99_RS17150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRK99_RS17155 PF06196 Protein of unknown function (DUF997) NRK99_RS17160 PF00474 Sodium:solute symporter family NRK99_RS17165 PF02378 Phosphotransferase system, EIIC NRK99_RS17165 PF00367 phosphotransferase system, EIIB NRK99_RS17165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRK99_RS17170 PF03466 LysR substrate binding domain NRK99_RS17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS17175 PF00107 Zinc-binding dehydrogenase NRK99_RS17175 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS17185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS17185 PF01842 ACT domain NRK99_RS17185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRK99_RS17190 PF14602 Hexapeptide repeat of succinyl-transferase NRK99_RS17190 PF12464 Maltose acetyltransferase NRK99_RS17195 PF00881 Nitroreductase family NRK99_RS17200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRK99_RS17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS17205 PF01343 Peptidase family S49 NRK99_RS17220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRK99_RS17220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRK99_RS17225 PF07023 Protein of unknown function (DUF1315) NRK99_RS17230 PF00710 Asparaginase, N-terminal NRK99_RS17230 PF17763 Glutaminase/Asparaginase C-terminal domain NRK99_RS17235 PF03616 Sodium/glutamate symporter NRK99_RS17240 PF02743 Cache domain NRK99_RS17240 PF00672 HAMP domain NRK99_RS17240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS17250 PF00152 tRNA synthetases class II (D, K and N) NRK99_RS17250 PF01336 OB-fold nucleic acid binding domain NRK99_RS17255 PF02567 Phenazine biosynthesis-like protein NRK99_RS17260 PF00175 Oxidoreductase NAD-binding domain NRK99_RS17260 PF00667 FAD binding domain NRK99_RS17260 PF00258 Flavodoxin NRK99_RS17265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRK99_RS17265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRK99_RS17270 PF01507 Phosphoadenosine phosphosulfate reductase family NRK99_RS17275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRK99_RS17280 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS17285 PF00005 ABC transporter NRK99_RS17285 PF00571 CBS domain NRK99_RS17290 PF00186 Dihydrofolate reductase NRK99_RS17295 PF12821 Threonine/Serine exporter, ThrE NRK99_RS17300 PF06738 Putative threonine/serine exporter NRK99_RS17310 PF00994 Probable molybdopterin binding domain NRK99_RS17320 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS17320 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS17335 PF00109 Beta-ketoacyl synthase, N-terminal domain NRK99_RS17335 PF02801 Beta-ketoacyl synthase, C-terminal domain NRK99_RS17360 PF00221 Aromatic amino acid lyase NRK99_RS17370 PF07977 FabA-like domain NRK99_RS17375 PF00501 AMP-binding enzyme NRK99_RS17375 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS17385 PF00550 Phosphopantetheine attachment site NRK99_RS17390 PF00550 Phosphopantetheine attachment site NRK99_RS17425 PF03150 Di-haem cytochrome c peroxidase NRK99_RS17425 PF00034 Cytochrome c NRK99_RS17430 PF00194 Eukaryotic-type carbonic anhydrase NRK99_RS17435 PF04227 Indigoidine synthase A like protein NRK99_RS17440 PF00294 pfkB family carbohydrate kinase NRK99_RS17460 PF00582 Universal stress protein family NRK99_RS17475 PF01472 PUA domain NRK99_RS17475 PF00696 Amino acid kinase family NRK99_RS17480 PF07417 Sigma factor-binding transcriptional regulator Crl NRK99_RS17485 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NRK99_RS17490 PF00156 Phosphoribosyl transferase domain NRK99_RS17495 PF07687 Peptidase dimerisation domain NRK99_RS17495 PF01546 Peptidase family M20/M25/M40 NRK99_RS17500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS17500 PF00005 ABC transporter NRK99_RS17505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRK99_RS17505 PF00005 ABC transporter NRK99_RS17515 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS17515 PF12911 N-terminal TM domain of oligopeptide transport permease C NRK99_RS17520 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS17525 PF00593 TonB dependent receptor NRK99_RS17525 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS17535 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS17540 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS17545 PF02472 Biopolymer transport protein ExbD/TolR NRK99_RS17560 PF06483 Chitinase C NRK99_RS17560 PF00704 Glycosyl hydrolases family 18 NRK99_RS17595 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRK99_RS17600 PF00672 HAMP domain NRK99_RS17600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS17610 PF00313 'Cold-shock' DNA-binding domain NRK99_RS17650 PF00929 Exonuclease NRK99_RS17655 PF03193 RsgA GTPase NRK99_RS17660 PF02666 Phosphatidylserine decarboxylase NRK99_RS17665 PF09905 DNA-binding protein VF530 NRK99_RS17685 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS17685 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS17685 PF00563 EAL domain NRK99_RS17690 PF06877 Regulator of ribonuclease activity B NRK99_RS17695 PF05547 Immune inhibitor A peptidase M6 NRK99_RS17695 PF00801 PKD domain NRK99_RS17710 PF00561 alpha/beta hydrolase fold NRK99_RS17715 PF00664 ABC transporter transmembrane region NRK99_RS17715 PF00005 ABC transporter NRK99_RS17720 PF06004 Bacterial protein of unknown function (DUF903) NRK99_RS17725 PF05922 Peptidase inhibitor I9 NRK99_RS17725 PF00082 Subtilase family NRK99_RS17730 PF00581 Rhodanese-like domain NRK99_RS17735 PF04960 Glutaminase NRK99_RS17740 PF04320 Protein with unknown function (DUF469) NRK99_RS17745 PF02390 Putative methyltransferase NRK99_RS17750 PF01483 Proprotein convertase P-domain NRK99_RS17750 PF04389 Peptidase family M28 NRK99_RS17755 PF00155 Aminotransferase class I and II NRK99_RS17760 PF12792 CSS motif domain associated with EAL NRK99_RS17760 PF00563 EAL domain NRK99_RS17765 PF08338 Domain of unknown function (DUF1731) NRK99_RS17765 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS17775 PF00005 ABC transporter NRK99_RS17780 PF13472 GDSL-like Lipase/Acylhydrolase family NRK99_RS17785 PF01584 CheW-like domain NRK99_RS17785 PF00072 Response regulator receiver domain NRK99_RS17805 PF02080 TrkA-C domain NRK99_RS17805 PF06826 Predicted Permease Membrane Region NRK99_RS17810 PF03006 Haemolysin-III related NRK99_RS17815 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRK99_RS17820 PF04279 Intracellular septation protein A NRK99_RS17825 PF03795 YCII-related domain NRK99_RS17830 PF00459 Inositol monophosphatase family NRK99_RS17840 PF00483 Nucleotidyl transferase NRK99_RS17845 PF00854 POT family NRK99_RS17850 PF00072 Response regulator receiver domain NRK99_RS17880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS17885 PF02321 Outer membrane efflux protein NRK99_RS17890 PF01207 Dihydrouridine synthase (Dus) NRK99_RS17895 PF02954 Bacterial regulatory protein, Fis family NRK99_RS17925 PF01521 Iron-sulphur cluster biosynthesis NRK99_RS17935 PF00654 Voltage gated chloride channel NRK99_RS17940 PF00202 Aminotransferase class-III NRK99_RS17955 PF01569 PAP2 superfamily NRK99_RS17965 PF11849 Domain of unknown function (DUF3369) NRK99_RS17975 PF00893 Small Multidrug Resistance protein NRK99_RS17980 PF00893 Small Multidrug Resistance protein NRK99_RS17985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS17990 PF14814 Bifunctional transglycosylase second domain NRK99_RS17990 PF00912 Transglycosylase NRK99_RS17990 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS17995 PF00270 DEAD/DEAH box helicase NRK99_RS17995 PF04408 Helicase associated domain (HA2) NRK99_RS17995 PF00271 Helicase conserved C-terminal domain NRK99_RS17995 PF08482 ATP-dependent helicase C-terminal NRK99_RS18005 PF03749 Sugar fermentation stimulation protein RE domain NRK99_RS18005 PF17746 SfsA N-terminal OB domain NRK99_RS18010 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRK99_RS18015 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRK99_RS18020 PF01743 Poly A polymerase head domain NRK99_RS18020 PF12626 Polymerase A arginine-rich C-terminus NRK99_RS18020 PF12627 Probable RNA and SrmB- binding site of polymerase A NRK99_RS18025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRK99_RS18030 PF02548 Ketopantoate hydroxymethyltransferase NRK99_RS18035 PF02569 Pantoate-beta-alanine ligase NRK99_RS18065 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRK99_RS18070 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component NRK99_RS18075 PF01061 ABC-2 type transporter NRK99_RS18080 PF00005 ABC transporter NRK99_RS18085 PF00156 Phosphoribosyl transferase domain NRK99_RS18090 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS18095 PF02441 Flavoprotein NRK99_RS18100 PF01225 Mur ligase family, catalytic domain NRK99_RS18100 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS18100 PF08245 Mur ligase middle domain NRK99_RS18105 PF00719 Inorganic pyrophosphatase NRK99_RS18120 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NRK99_RS18135 PF00005 ABC transporter NRK99_RS18155 PF08447 PAS fold NRK99_RS18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS18160 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS18160 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS18190 PF03600 Citrate transporter NRK99_RS18190 PF02080 TrkA-C domain NRK99_RS18195 PF00009 Elongation factor Tu GTP binding domain NRK99_RS18200 PF01507 Phosphoadenosine phosphosulfate reductase family NRK99_RS18205 PF10414 Sirohaem synthase dimerisation region NRK99_RS18205 PF14824 Sirohaem biosynthesis protein central NRK99_RS18205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRK99_RS18210 PF01145 SPFH domain / Band 7 family NRK99_RS18210 PF16200 C-terminal region of band_7 NRK99_RS18215 PF01957 NfeD-like C-terminal, partner-binding NRK99_RS18220 PF00571 CBS domain NRK99_RS18220 PF01380 SIS domain NRK99_RS18225 PF12848 ABC transporter NRK99_RS18225 PF00005 ABC transporter NRK99_RS18235 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NRK99_RS18275 PF00474 Sodium:solute symporter family NRK99_RS18280 PF03734 L,D-transpeptidase catalytic domain NRK99_RS18280 PF17969 L,D-transpeptidase C-terminal domain NRK99_RS18285 PF00924 Mechanosensitive ion channel NRK99_RS18290 PF00871 Acetokinase family NRK99_RS18295 PF04074 YhcH/YjgK/YiaL NRK99_RS18305 PF00394 Multicopper oxidase NRK99_RS18305 PF07731 Multicopper oxidase NRK99_RS18305 PF07732 Multicopper oxidase NRK99_RS18310 PF01177 Asp/Glu/Hydantoin racemase NRK99_RS18315 PF01810 LysE type translocator NRK99_RS18325 PF00155 Aminotransferase class I and II NRK99_RS18325 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS18350 PF00209 Sodium:neurotransmitter symporter family NRK99_RS18360 PF00209 Sodium:neurotransmitter symporter family NRK99_RS18380 PF07690 Major Facilitator Superfamily NRK99_RS18390 PF01037 Lrp/AsnC ligand binding domain NRK99_RS18405 PF01047 MarR family NRK99_RS18410 PF00107 Zinc-binding dehydrogenase NRK99_RS18410 PF16884 N-terminal domain of oxidoreductase NRK99_RS18415 PF00293 NUDIX domain NRK99_RS18425 PF01641 SelR domain NRK99_RS18430 PF00128 Alpha amylase, catalytic domain NRK99_RS18430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRK99_RS18435 PF00128 Alpha amylase, catalytic domain NRK99_RS18435 PF02806 Alpha amylase, C-terminal all-beta domain NRK99_RS18435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRK99_RS18440 PF02446 4-alpha-glucanotransferase NRK99_RS18445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRK99_RS18445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRK99_RS18450 PF01263 Aldose 1-epimerase NRK99_RS18455 PF02445 Quinolinate synthetase A protein NRK99_RS18460 PF00672 HAMP domain NRK99_RS18460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS18535 PF16331 TolA binding protein trimerisation NRK99_RS18535 PF13174 Tetratricopeptide repeat NRK99_RS18540 PF00691 OmpA family NRK99_RS18545 PF04052 TolB amino-terminal domain NRK99_RS18545 PF07676 WD40-like Beta Propeller Repeat NRK99_RS18555 PF02472 Biopolymer transport protein ExbD/TolR NRK99_RS18560 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS18565 PF03061 Thioesterase superfamily NRK99_RS18570 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NRK99_RS18575 PF08173 Membrane bound YbgT-like protein NRK99_RS18580 PF02322 Cytochrome bd terminal oxidase subunit II NRK99_RS18585 PF01654 Cytochrome bd terminal oxidase subunit I NRK99_RS18590 PF17864 RuvB AAA lid domain NRK99_RS18590 PF05491 RuvB C-terminal winged helix domain NRK99_RS18590 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRK99_RS18595 PF01330 RuvA N terminal domain NRK99_RS18595 PF07499 RuvA, C-terminal domain NRK99_RS18600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS18600 PF00672 HAMP domain NRK99_RS18605 PF03129 Anticodon binding domain NRK99_RS18605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRK99_RS18605 PF04073 Aminoacyl-tRNA editing domain NRK99_RS18610 PF00106 short chain dehydrogenase NRK99_RS18625 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS18630 PF10952 Protein of unknown function (DUF2753) NRK99_RS18635 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS18645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRK99_RS18660 PF02594 Uncharacterised ACR, YggU family COG1872 NRK99_RS18665 PF02325 YGGT family NRK99_RS18670 PF03807 NADP oxidoreductase coenzyme F420-dependent NRK99_RS18670 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRK99_RS18675 PF01168 Alanine racemase, N-terminal domain NRK99_RS18680 PF00437 Type II/IV secretion system protein NRK99_RS18685 PF00437 Type II/IV secretion system protein NRK99_RS18690 PF03883 Peroxide stress protein YaaA NRK99_RS18695 PF00270 DEAD/DEAH box helicase NRK99_RS18695 PF00271 Helicase conserved C-terminal domain NRK99_RS18700 PF05175 Methyltransferase small domain NRK99_RS18705 PF05525 Branched-chain amino acid transport protein NRK99_RS18710 PF05525 Branched-chain amino acid transport protein NRK99_RS18725 PF01475 Ferric uptake regulator family NRK99_RS18730 PF01207 Dihydrouridine synthase (Dus) NRK99_RS18745 PF00216 Bacterial DNA-binding protein NRK99_RS18755 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NRK99_RS18760 PF07238 PilZ domain NRK99_RS18765 PF18073 Rubredoxin metal binding domain NRK99_RS18780 PF18429 Domain of unknown function (DUF5609) NRK99_RS18790 PF13426 PAS domain NRK99_RS18790 PF00563 EAL domain NRK99_RS18790 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS18790 PF05231 MASE1 NRK99_RS18790 PF08448 PAS fold NRK99_RS18790 PF08447 PAS fold NRK99_RS18795 PF01048 Phosphorylase superfamily NRK99_RS18800 PF01676 Metalloenzyme superfamily NRK99_RS18805 PF00591 Glycosyl transferase family, a/b domain NRK99_RS18805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NRK99_RS18805 PF02885 Glycosyl transferase family, helical bundle domain NRK99_RS18810 PF01791 DeoC/LacD family aldolase NRK99_RS18820 PF07670 Nucleoside recognition NRK99_RS18820 PF07662 Na+ dependent nucleoside transporter C-terminus NRK99_RS18820 PF01773 Na+ dependent nucleoside transporter N-terminus NRK99_RS18825 PF01026 TatD related DNase NRK99_RS18830 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS18840 PF00583 Acetyltransferase (GNAT) family NRK99_RS18845 PF01938 TRAM domain NRK99_RS18845 PF05958 tRNA (Uracil-5-)-methyltransferase NRK99_RS18850 PF00909 Ammonium Transporter Family NRK99_RS18855 PF00589 Phage integrase family NRK99_RS18855 PF02899 Phage integrase, N-terminal SAM-like domain NRK99_RS19085 PF03739 Lipopolysaccharide export system permease LptF/LptG NRK99_RS19090 PF03739 Lipopolysaccharide export system permease LptF/LptG NRK99_RS19095 PF00883 Cytosol aminopeptidase family, catalytic domain NRK99_RS19095 PF02789 Cytosol aminopeptidase family, N-terminal domain NRK99_RS19100 PF04364 DNA polymerase III chi subunit, HolC NRK99_RS19105 PF08264 Anticodon-binding domain of tRNA NRK99_RS19105 PF00133 tRNA synthetases class I (I, L, M and V) NRK99_RS19105 PF10458 Valyl tRNA synthetase tRNA binding arm NRK99_RS19110 PF00571 CBS domain NRK99_RS19110 PF01595 Cyclin M transmembrane N-terminal domain NRK99_RS19110 PF03471 Transporter associated domain NRK99_RS19115 PF09335 SNARE associated Golgi protein NRK99_RS19120 PF00768 D-alanyl-D-alanine carboxypeptidase NRK99_RS19155 PF02599 Global regulator protein family NRK99_RS19160 PF00696 Amino acid kinase family NRK99_RS19160 PF01842 ACT domain NRK99_RS19160 PF13840 ACT domain NRK99_RS19165 PF02272 DHHA1 domain NRK99_RS19165 PF01411 tRNA synthetases class II (A) NRK99_RS19165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRK99_RS19170 PF02631 RecX family NRK99_RS19175 PF00154 recA bacterial DNA recombination protein NRK99_RS19180 PF02464 Competence-damaged protein NRK99_RS19185 PF01624 MutS domain I NRK99_RS19185 PF05188 MutS domain II NRK99_RS19185 PF05190 MutS family domain IV NRK99_RS19185 PF05192 MutS domain III NRK99_RS19185 PF00488 MutS domain V NRK99_RS19190 PF02028 BCCT, betaine/carnitine/choline family transporter NRK99_RS19205 PF04222 Protein of unknown function (DUF416) NRK99_RS19210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS19215 PF01551 Peptidase family M23 NRK99_RS19215 PF08525 Opacity-associated protein A N-terminal motif NRK99_RS19215 PF01476 LysM domain NRK99_RS19235 PF01297 Zinc-uptake complex component A periplasmic NRK99_RS19240 PF00005 ABC transporter NRK99_RS19245 PF00950 ABC 3 transport family NRK99_RS19250 PF03466 LysR substrate binding domain NRK99_RS19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19255 PF00892 EamA-like transporter family NRK99_RS19260 PF03167 Uracil DNA glycosylase superfamily NRK99_RS19265 PF00892 EamA-like transporter family NRK99_RS19275 PF01541 GIY-YIG catalytic domain NRK99_RS19290 PF04012 PspA/IM30 family NRK99_RS19295 PF01553 Acyltransferase NRK99_RS19315 PF00578 AhpC/TSA family NRK99_RS19325 PF00226 DnaJ domain NRK99_RS19325 PF01556 DnaJ C terminal domain NRK99_RS19325 PF00684 DnaJ central domain NRK99_RS19370 PF03466 LysR substrate binding domain NRK99_RS19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19380 PF02600 Disulfide bond formation protein DsbB NRK99_RS19385 PF07690 Major Facilitator Superfamily NRK99_RS19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19390 PF03466 LysR substrate binding domain NRK99_RS19400 PF03989 DNA gyrase C-terminal domain, beta-propeller NRK99_RS19400 PF00521 DNA gyrase/topoisomerase IV, subunit A NRK99_RS19405 PF01751 Toprim domain NRK99_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS19405 PF00204 DNA gyrase B NRK99_RS19405 PF00986 DNA gyrase B subunit, carboxyl terminus NRK99_RS19410 PF04632 Fusaric acid resistance protein family NRK99_RS19415 PF00529 HlyD membrane-fusion protein of T1SS NRK99_RS19415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRK99_RS19420 PF07869 Protein of unknown function (DUF1656) NRK99_RS19430 PF00293 NUDIX domain NRK99_RS19435 PF05728 Uncharacterised protein family (UPF0227) NRK99_RS19440 PF00149 Calcineurin-like phosphoesterase NRK99_RS19445 PF06853 Protein of unknown function (DUF1249) NRK99_RS19450 PF00293 NUDIX domain NRK99_RS19455 PF02321 Outer membrane efflux protein NRK99_RS19460 PF00294 pfkB family carbohydrate kinase NRK99_RS19460 PF01467 Cytidylyltransferase-like NRK99_RS19465 PF03279 Bacterial lipid A biosynthesis acyltransferase NRK99_RS19480 PF01865 Protein of unknown function DUF47 NRK99_RS19485 PF01384 Phosphate transporter family NRK99_RS19490 PF04073 Aminoacyl-tRNA editing domain NRK99_RS19510 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS19510 PF00155 Aminotransferase class I and II NRK99_RS19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19520 PF03466 LysR substrate binding domain NRK99_RS19525 PF03788 LrgA family NRK99_RS19530 PF04172 LrgB-like family NRK99_RS19545 PF01743 Poly A polymerase head domain NRK99_RS19545 PF12627 Probable RNA and SrmB- binding site of polymerase A NRK99_RS19545 PF01966 HD domain NRK99_RS19550 PF01471 Putative peptidoglycan binding domain NRK99_RS19550 PF13401 AAA domain NRK99_RS19555 PF16537 Type II secretion system protein B NRK99_RS19560 PF10576 Iron-sulfur binding domain of endonuclease III NRK99_RS19560 PF00633 Helix-hairpin-helix motif NRK99_RS19560 PF00730 HhH-GPD superfamily base excision DNA repair protein NRK99_RS19560 PF14815 NUDIX domain NRK99_RS19565 PF04362 Bacterial Fe(2+) trafficking NRK99_RS19570 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NRK99_RS19570 PF01464 Transglycosylase SLT domain NRK99_RS19575 PF04076 Bacterial OB fold (BOF) protein NRK99_RS19580 PF00657 GDSL-like Lipase/Acylhydrolase NRK99_RS19590 PF01389 OmpA-like transmembrane domain NRK99_RS19590 PF00691 OmpA family NRK99_RS19595 PF03886 ABC-type transport auxiliary lipoprotein component NRK99_RS19600 PF02470 MlaD protein NRK99_RS19605 PF04403 Paraquat-inducible protein A NRK99_RS19610 PF17209 Hfq protein NRK99_RS19615 PF13419 Haloacid dehalogenase-like hydrolase NRK99_RS19625 PF00360 Phytochrome region NRK99_RS19625 PF00563 EAL domain NRK99_RS19625 PF01590 GAF domain NRK99_RS19625 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS19630 PF00701 Dihydrodipicolinate synthetase family NRK99_RS19635 PF05175 Methyltransferase small domain NRK99_RS19635 PF08468 Methyltransferase small domain N-terminal NRK99_RS19640 PF00483 Nucleotidyl transferase NRK99_RS19645 PF00534 Glycosyl transferases group 1 NRK99_RS19645 PF08323 Starch synthase catalytic domain NRK99_RS19680 PF03553 Na+/H+ antiporter family NRK99_RS19685 PF03466 LysR substrate binding domain NRK99_RS19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19690 PF13416 Bacterial extracellular solute-binding protein NRK99_RS19695 PF08402 TOBE domain NRK99_RS19695 PF00005 ABC transporter NRK99_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS19710 PF00171 Aldehyde dehydrogenase family NRK99_RS19735 PF14602 Hexapeptide repeat of succinyl-transferase NRK99_RS19735 PF12464 Maltose acetyltransferase NRK99_RS19740 PF00128 Alpha amylase, catalytic domain NRK99_RS19740 PF11941 Domain of unknown function (DUF3459) NRK99_RS19745 PF00367 phosphotransferase system, EIIB NRK99_RS19745 PF02378 Phosphotransferase system, EIIC NRK99_RS19750 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS19765 PF00710 Asparaginase, N-terminal NRK99_RS19765 PF17763 Glutaminase/Asparaginase C-terminal domain NRK99_RS19780 PF02142 MGS-like domain NRK99_RS19790 PF00210 Ferritin-like domain NRK99_RS19805 PF08351 Domain of unknown function (DUF1726) NRK99_RS19805 PF17176 tRNA-binding domain NRK99_RS19805 PF05127 Helicase NRK99_RS19805 PF13718 GNAT acetyltransferase 2 NRK99_RS19810 PF00106 short chain dehydrogenase NRK99_RS19815 PF01584 CheW-like domain NRK99_RS19815 PF00072 Response regulator receiver domain NRK99_RS19820 PF07670 Nucleoside recognition NRK99_RS19855 PF02660 Glycerol-3-phosphate acyltransferase NRK99_RS19860 PF02152 Dihydroneopterin aldolase NRK99_RS19865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRK99_RS19875 PF07690 Major Facilitator Superfamily NRK99_RS19880 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRK99_RS19880 PF07683 Cobalamin synthesis protein cobW C-terminal domain NRK99_RS19885 PF04030 D-arabinono-1,4-lactone oxidase NRK99_RS19885 PF01565 FAD binding domain NRK99_RS19890 PF01810 LysE type translocator NRK99_RS19895 PF03466 LysR substrate binding domain NRK99_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS19900 PF00563 EAL domain NRK99_RS19900 PF12792 CSS motif domain associated with EAL NRK99_RS19905 PF06434 Aconitate hydratase 2 N-terminus NRK99_RS19905 PF11791 Aconitate B N-terminal domain NRK99_RS19905 PF00330 Aconitase family (aconitate hydratase) NRK99_RS19910 PF01734 Patatin-like phospholipase NRK99_RS19915 PF00672 HAMP domain NRK99_RS19915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS19915 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS19920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS19920 PF00672 HAMP domain NRK99_RS19920 PF12729 Four helix bundle sensory module for signal transduction NRK99_RS19930 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS19930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRK99_RS19935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRK99_RS19935 PF00364 Biotin-requiring enzyme NRK99_RS19935 PF02817 e3 binding domain NRK99_RS19940 PF17831 Pyruvate dehydrogenase E1 component middle domain NRK99_RS19940 PF00456 Transketolase, thiamine diphosphate binding domain NRK99_RS19945 PF07729 FCD domain NRK99_RS19945 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS19950 PF01510 N-acetylmuramoyl-L-alanine amidase NRK99_RS19960 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NRK99_RS19960 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NRK99_RS19965 PF07963 Prokaryotic N-terminal methylation motif NRK99_RS19970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRK99_RS19970 PF00437 Type II/IV secretion system protein NRK99_RS19975 PF00482 Type II secretion system (T2SS), protein F NRK99_RS19980 PF06750 Bacterial Peptidase A24 N-terminal domain NRK99_RS19980 PF01478 Type IV leader peptidase family NRK99_RS19985 PF01121 Dephospho-CoA kinase NRK99_RS19990 PF07072 Cell division protein NRK99_RS19995 PF03884 DNA gyrase inhibitor YacG NRK99_RS20000 PF00293 NUDIX domain NRK99_RS20010 PF02810 SEC-C motif NRK99_RS20010 PF01043 SecA preprotein cross-linking domain NRK99_RS20010 PF07517 SecA DEAD-like domain NRK99_RS20010 PF07516 SecA Wing and Scaffold domain NRK99_RS20020 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NRK99_RS20025 PF12327 FtsZ family, C-terminal domain NRK99_RS20025 PF00091 Tubulin/FtsZ family, GTPase domain NRK99_RS20030 PF02491 SHS2 domain inserted in FTSA NRK99_RS20035 PF03799 Cell division protein FtsQ NRK99_RS20035 PF08478 POTRA domain, FtsQ-type NRK99_RS20040 PF08245 Mur ligase middle domain NRK99_RS20040 PF01225 Mur ligase family, catalytic domain NRK99_RS20040 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS20045 PF03033 Glycosyltransferase family 28 N-terminal domain NRK99_RS20045 PF04101 Glycosyltransferase family 28 C-terminal domain NRK99_RS20050 PF01098 Cell cycle protein NRK99_RS20055 PF08245 Mur ligase middle domain NRK99_RS20055 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS20060 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NRK99_RS20060 PF00953 Glycosyl transferase family 4 NRK99_RS20065 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS20065 PF01225 Mur ligase family, catalytic domain NRK99_RS20065 PF08245 Mur ligase middle domain NRK99_RS20070 PF02875 Mur ligase family, glutamate ligase domain NRK99_RS20070 PF08245 Mur ligase middle domain NRK99_RS20070 PF01225 Mur ligase family, catalytic domain NRK99_RS20075 PF03717 Penicillin-binding Protein dimerisation domain NRK99_RS20075 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS20080 PF04999 Cell division protein FtsL NRK99_RS20085 PF01795 MraW methylase family NRK99_RS20090 PF02381 MraZ protein, putative antitoxin-like NRK99_RS20100 PF01464 Transglycosylase SLT domain NRK99_RS20100 PF01476 LysM domain NRK99_RS20105 PF00691 OmpA family NRK99_RS20105 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRK99_RS20110 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS20115 PF04545 Sigma-70, region 4 NRK99_RS20115 PF04542 Sigma-70 region 2 NRK99_RS20135 PF02561 Flagellar protein FliS NRK99_RS20140 PF07195 Flagellar hook-associated protein 2 C-terminus NRK99_RS20140 PF02465 Flagellar hook-associated protein 2 N-terminus NRK99_RS20140 PF07196 Flagellin hook IN motif NRK99_RS20145 PF00700 Bacterial flagellin C-terminal helical region NRK99_RS20145 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS20150 PF00700 Bacterial flagellin C-terminal helical region NRK99_RS20150 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS20165 PF00669 Bacterial flagellin N-terminal helical region NRK99_RS20170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS20170 PF00460 Flagella basal body rod protein NRK99_RS20180 PF02119 Flagellar P-ring protein NRK99_RS20185 PF02107 Flagellar L-ring protein NRK99_RS20190 PF00460 Flagella basal body rod protein NRK99_RS20190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS20195 PF00460 Flagella basal body rod protein NRK99_RS20195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS20200 PF07559 Flagellar basal body protein FlaE NRK99_RS20200 PF00460 Flagella basal body rod protein NRK99_RS20200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS20205 PF03963 Flagellar hook capping protein - N-terminal region NRK99_RS20205 PF13860 FlgD Ig-like domain NRK99_RS20205 PF13861 FlgD Tudor-like domain NRK99_RS20210 PF00460 Flagella basal body rod protein NRK99_RS20210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRK99_RS20215 PF00460 Flagella basal body rod protein NRK99_RS20240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS20240 PF18269 T3SS EscN ATPase C-terminal domain NRK99_RS20250 PF01706 FliG C-terminal domain NRK99_RS20250 PF14841 FliG middle domain NRK99_RS20250 PF14842 FliG N-terminal domain NRK99_RS20255 PF01514 Secretory protein of YscJ/FliF family NRK99_RS20255 PF08345 Flagellar M-ring protein C-terminal NRK99_RS20260 PF02049 Flagellar hook-basal body complex protein FliE NRK99_RS20265 PF00072 Response regulator receiver domain NRK99_RS20265 PF02954 Bacterial regulatory protein, Fis family NRK99_RS20265 PF00158 Sigma-54 interaction domain NRK99_RS20270 PF00771 FHIPEP family NRK99_RS20275 PF01312 FlhB HrpN YscU SpaS Family NRK99_RS20280 PF01311 Bacterial export proteins, family 1 NRK99_RS20285 PF01313 Bacterial export proteins, family 3 NRK99_RS20290 PF00813 FliP family NRK99_RS20295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRK99_RS20310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRK99_RS20315 PF04348 LppC putative lipoprotein NRK99_RS20320 PF02021 Uncharacterised protein family UPF0102 NRK99_RS20325 PF13580 SIS domain NRK99_RS20330 PF04972 BON domain NRK99_RS20335 PF04386 Stringent starvation protein B NRK99_RS20340 PF00043 Glutathione S-transferase, C-terminal domain NRK99_RS20340 PF02798 Glutathione S-transferase, N-terminal domain NRK99_RS20345 PF02167 Cytochrome C1 family NRK99_RS20350 PF00032 Cytochrome b(C-terminal)/b6/petD NRK99_RS20350 PF00033 Cytochrome b/b6/petB NRK99_RS20355 PF00355 Rieske [2Fe-2S] domain NRK99_RS20355 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NRK99_RS20360 PF00380 Ribosomal protein S9/S16 NRK99_RS20365 PF00572 Ribosomal protein L13 NRK99_RS20370 PF03969 AFG1-like ATPase NRK99_RS20380 PF13180 PDZ domain NRK99_RS20380 PF00595 PDZ domain NRK99_RS20385 PF13180 PDZ domain NRK99_RS20415 PF01979 Amidohydrolase family NRK99_RS20420 PF03841 L-seryl-tRNA selenium transferase NRK99_RS20425 PF07071 KDGP aldolase NRK99_RS20430 PF08279 HTH domain NRK99_RS20430 PF05043 Mga helix-turn-helix domain NRK99_RS20430 PF00874 PRD domain NRK99_RS20430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS20435 PF00381 PTS HPr component phosphorylation site NRK99_RS20440 PF03668 P-loop ATPase protein family NRK99_RS20445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRK99_RS20450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRK99_RS20455 PF00309 Sigma-54 factor, Activator interacting domain (AID) NRK99_RS20455 PF04963 Sigma-54 factor, core binding domain NRK99_RS20455 PF04552 Sigma-54, DNA binding domain NRK99_RS20460 PF00005 ABC transporter NRK99_RS20460 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRK99_RS20465 PF03968 OstA-like protein NRK99_RS20470 PF06835 Lipopolysaccharide-assembly, LptC-related NRK99_RS20480 PF00571 CBS domain NRK99_RS20480 PF01380 SIS domain NRK99_RS20485 PF00005 ABC transporter NRK99_RS20490 PF02405 Permease MlaE NRK99_RS20495 PF02470 MlaD protein NRK99_RS20500 PF05494 MlaC protein NRK99_RS20510 PF01722 BolA-like protein NRK99_RS20515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRK99_RS20520 PF01523 Putative modulator of DNA gyrase NRK99_RS20525 PF04751 Protein of unknown function (DUF615) NRK99_RS20535 PF04363 Protein of unknown function (DUF496) NRK99_RS20570 PF01381 Helix-turn-helix NRK99_RS20570 PF07883 Cupin domain NRK99_RS20575 PF03594 Benzoate membrane transport protein NRK99_RS20585 PF02219 Methylenetetrahydrofolate reductase NRK99_RS20600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS20600 PF00672 HAMP domain NRK99_RS20605 PF03922 OmpW family NRK99_RS20610 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS20615 PF00005 ABC transporter NRK99_RS20615 PF17755 UvrA DNA-binding domain NRK99_RS20615 PF17760 UvrA interaction domain NRK99_RS20620 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS20625 PF00436 Single-strand binding protein family NRK99_RS20640 PF01545 Cation efflux family NRK99_RS20640 PF16916 Dimerisation domain of Zinc Transporter NRK99_RS20650 PF00313 'Cold-shock' DNA-binding domain NRK99_RS20655 PF00593 TonB dependent receptor NRK99_RS20655 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS20660 PF00360 Phytochrome region NRK99_RS20660 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS20660 PF01590 GAF domain NRK99_RS20660 PF00563 EAL domain NRK99_RS20665 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS20665 PF00672 HAMP domain NRK99_RS20670 PF00072 Response regulator receiver domain NRK99_RS20670 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS20695 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS20705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRK99_RS20715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS20715 PF03466 LysR substrate binding domain NRK99_RS20730 PF13538 UvrD-like helicase C-terminal domain NRK99_RS20735 PF13361 UvrD-like helicase C-terminal domain NRK99_RS20735 PF12705 PD-(D/E)XK nuclease superfamily NRK99_RS20735 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS20740 PF17946 RecC C-terminal domain NRK99_RS20745 PF07681 DoxX NRK99_RS20750 PF17954 Quercetinase C-terminal cupin domain NRK99_RS20750 PF02678 Pirin NRK99_RS20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS20760 PF03466 LysR substrate binding domain NRK99_RS20770 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS20770 PF07702 UTRA domain NRK99_RS20785 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS20795 PF08402 TOBE domain NRK99_RS20795 PF00005 ABC transporter NRK99_RS20805 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS20825 PF00583 Acetyltransferase (GNAT) family NRK99_RS20850 PF01569 PAP2 superfamily NRK99_RS20855 PF01594 AI-2E family transporter NRK99_RS20870 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRK99_RS20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS20875 PF03466 LysR substrate binding domain NRK99_RS20880 PF02954 Bacterial regulatory protein, Fis family NRK99_RS20880 PF00158 Sigma-54 interaction domain NRK99_RS20880 PF00989 PAS fold NRK99_RS20885 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS20890 PF00381 PTS HPr component phosphorylation site NRK99_RS20890 PF00391 PEP-utilising enzyme, mobile domain NRK99_RS20890 PF05524 PEP-utilising enzyme, N-terminal NRK99_RS20890 PF03610 PTS system fructose IIA component NRK99_RS20895 PF02734 DAK2 domain NRK99_RS20900 PF02733 Dak1 domain NRK99_RS20905 PF00860 Permease family NRK99_RS20945 PF03143 Elongation factor Tu C-terminal domain NRK99_RS20945 PF00009 Elongation factor Tu GTP binding domain NRK99_RS20945 PF03144 Elongation factor Tu domain 2 NRK99_RS20950 PF03144 Elongation factor Tu domain 2 NRK99_RS20950 PF00009 Elongation factor Tu GTP binding domain NRK99_RS20950 PF03764 Elongation factor G, domain IV NRK99_RS20950 PF14492 Elongation Factor G, domain II NRK99_RS20950 PF00679 Elongation factor G C-terminus NRK99_RS20955 PF00177 Ribosomal protein S7p/S5e NRK99_RS20960 PF00164 Ribosomal protein S12/S23 NRK99_RS20965 PF04077 DsrH like protein NRK99_RS20970 PF02635 DsrE/DsrF-like family NRK99_RS20975 PF02635 DsrE/DsrF-like family NRK99_RS20980 PF01042 Endoribonuclease L-PSP NRK99_RS20985 PF08348 YheO-like PAS domain NRK99_RS20985 PF13309 HTH domain NRK99_RS20990 PF04998 RNA polymerase Rpb1, domain 5 NRK99_RS20990 PF04997 RNA polymerase Rpb1, domain 1 NRK99_RS20990 PF00623 RNA polymerase Rpb1, domain 2 NRK99_RS20990 PF04983 RNA polymerase Rpb1, domain 3 NRK99_RS20990 PF05000 RNA polymerase Rpb1, domain 4 NRK99_RS20995 PF04563 RNA polymerase beta subunit NRK99_RS20995 PF04561 RNA polymerase Rpb2, domain 2 NRK99_RS20995 PF10385 RNA polymerase beta subunit external 1 domain NRK99_RS20995 PF00562 RNA polymerase Rpb2, domain 6 NRK99_RS20995 PF04560 RNA polymerase Rpb2, domain 7 NRK99_RS20995 PF04565 RNA polymerase Rpb2, domain 3 NRK99_RS21000 PF16320 Ribosomal protein L7/L12 dimerisation domain NRK99_RS21000 PF00542 Ribosomal protein L7/L12 C-terminal domain NRK99_RS21005 PF00466 Ribosomal protein L10 NRK99_RS21010 PF00687 Ribosomal protein L1p/L10e family NRK99_RS21015 PF03946 Ribosomal protein L11, N-terminal domain NRK99_RS21015 PF00298 Ribosomal protein L11, RNA binding domain NRK99_RS21020 PF02357 Transcription termination factor nusG NRK99_RS21020 PF00467 KOW motif NRK99_RS21025 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NRK99_RS21035 PF00009 Elongation factor Tu GTP binding domain NRK99_RS21035 PF03143 Elongation factor Tu C-terminal domain NRK99_RS21035 PF03144 Elongation factor Tu domain 2 NRK99_RS21050 PF00485 Phosphoribulokinase / Uridine kinase family NRK99_RS21055 PF02237 Biotin protein ligase C terminal domain NRK99_RS21055 PF03099 Biotin/lipoate A/B protein ligase family NRK99_RS21055 PF08279 HTH domain NRK99_RS21060 PF01565 FAD binding domain NRK99_RS21060 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NRK99_RS21065 PF02254 TrkA-N domain NRK99_RS21065 PF02080 TrkA-C domain NRK99_RS21070 PF02386 Cation transport protein NRK99_RS21075 PF12833 Helix-turn-helix domain NRK99_RS21075 PF12852 Cupin NRK99_RS21090 PF01751 Toprim domain NRK99_RS21090 PF01131 DNA topoisomerase NRK99_RS21095 PF03264 NapC/NirT cytochrome c family, N-terminal region NRK99_RS21100 PF00384 Molybdopterin oxidoreductase NRK99_RS21100 PF18364 Molybdopterin oxidoreductase N-terminal domain NRK99_RS21100 PF01568 Molydopterin dinucleotide binding domain NRK99_RS21110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS21115 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS21115 PF00072 Response regulator receiver domain NRK99_RS21130 PF01794 Ferric reductase like transmembrane component NRK99_RS21135 PF00174 Oxidoreductase molybdopterin binding domain NRK99_RS21140 PF06496 Protein of unknown function (DUF1097) NRK99_RS21145 PF00072 Response regulator receiver domain NRK99_RS21145 PF00158 Sigma-54 interaction domain NRK99_RS21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS21155 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS21175 PF00571 CBS domain NRK99_RS21175 PF00478 IMP dehydrogenase / GMP reductase domain NRK99_RS21180 PF10063 Uncharacterized integral membrane protein (DUF2301) NRK99_RS21190 PF01037 Lrp/AsnC ligand binding domain NRK99_RS21195 PF03590 Aspartate-ammonia ligase NRK99_RS21205 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS21205 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS21205 PF17871 AAA lid domain NRK99_RS21205 PF02861 Clp amino terminal domain, pathogenicity island component NRK99_RS21205 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS21210 PF02578 Multi-copper polyphenol oxidoreductase laccase NRK99_RS21215 PF01479 S4 domain NRK99_RS21215 PF00849 RNA pseudouridylate synthase NRK99_RS21220 PF13525 Outer membrane lipoprotein NRK99_RS21225 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS21225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRK99_RS21230 PF00375 Sodium:dicarboxylate symporter family NRK99_RS21235 PF03313 Serine dehydratase alpha chain NRK99_RS21245 PF02233 NAD(P) transhydrogenase beta subunit NRK99_RS21250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRK99_RS21250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRK99_RS21250 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NRK99_RS21255 PF00465 Iron-containing alcohol dehydrogenase NRK99_RS21260 PF12833 Helix-turn-helix domain NRK99_RS21260 PF06719 AraC-type transcriptional regulator N-terminus NRK99_RS21265 PF08212 Lipocalin-like domain NRK99_RS21270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS21270 PF00672 HAMP domain NRK99_RS21270 PF02743 Cache domain NRK99_RS21280 PF02666 Phosphatidylserine decarboxylase NRK99_RS21300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRK99_RS21300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRK99_RS21305 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NRK99_RS21305 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NRK99_RS21310 PF01316 Arginine repressor, DNA binding domain NRK99_RS21310 PF02863 Arginine repressor, C-terminal domain NRK99_RS21315 PF03606 C4-dicarboxylate anaerobic carrier NRK99_RS21320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRK99_RS21320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRK99_RS21325 PF00696 Amino acid kinase family NRK99_RS21350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS21350 PF00672 HAMP domain NRK99_RS21350 PF02743 Cache domain NRK99_RS21355 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS21360 PF00005 ABC transporter NRK99_RS21365 PF13407 Periplasmic binding protein domain NRK99_RS21370 PF16353 Domain of unknown function(DUF4981) NRK99_RS21370 PF02929 Beta galactosidase small chain NRK99_RS21370 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRK99_RS21370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRK99_RS21370 PF00703 Glycosyl hydrolases family 2 NRK99_RS21375 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS21380 PF16363 GDP-mannose 4,6 dehydratase NRK99_RS21385 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NRK99_RS21385 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NRK99_RS21390 PF10509 Galactokinase galactose-binding signature NRK99_RS21390 PF08544 GHMP kinases C terminal NRK99_RS21390 PF00288 GHMP kinases N terminal domain NRK99_RS21395 PF01263 Aldose 1-epimerase NRK99_RS21400 PF00248 Aldo/keto reductase family NRK99_RS21405 PF02673 Bacitracin resistance protein BacA NRK99_RS21410 PF12973 ChrR Cupin-like domain NRK99_RS21415 PF04542 Sigma-70 region 2 NRK99_RS21415 PF04545 Sigma-70, region 4 NRK99_RS21425 PF03485 Arginyl tRNA synthetase N terminal domain NRK99_RS21425 PF05746 DALR anticodon binding domain NRK99_RS21425 PF00750 tRNA synthetases class I (R) NRK99_RS21435 PF00227 Proteasome subunit NRK99_RS21440 PF07724 AAA domain (Cdc48 subfamily) NRK99_RS21440 PF10431 C-terminal, D2-small domain, of ClpB protein NRK99_RS21440 PF00004 ATPase family associated with various cellular activities (AAA) NRK99_RS21445 PF07690 Major Facilitator Superfamily NRK99_RS21450 PF03466 LysR substrate binding domain NRK99_RS21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRK99_RS21455 PF04324 BFD-like [2Fe-2S] binding domain NRK99_RS21455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRK99_RS21455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRK99_RS21455 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRK99_RS21455 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRK99_RS21460 PF13806 Rieske-like [2Fe-2S] domain NRK99_RS21465 PF01226 Formate/nitrite transporter NRK99_RS21470 PF10414 Sirohaem synthase dimerisation region NRK99_RS21470 PF14824 Sirohaem biosynthesis protein central NRK99_RS21470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRK99_RS21475 PF01769 Divalent cation transporter NRK99_RS21475 PF03448 MgtE intracellular N domain NRK99_RS21475 PF00571 CBS domain NRK99_RS21480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRK99_RS21480 PF00672 HAMP domain NRK99_RS21485 PF03737 Aldolase/RraA NRK99_RS21490 PF02592 Putative vitamin uptake transporter NRK99_RS21500 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NRK99_RS21505 PF00034 Cytochrome c NRK99_RS21510 PF09382 RQC domain NRK99_RS21510 PF16124 RecQ zinc-binding NRK99_RS21510 PF00570 HRDC domain NRK99_RS21510 PF00271 Helicase conserved C-terminal domain NRK99_RS21510 PF00270 DEAD/DEAH box helicase NRK99_RS21515 PF03061 Thioesterase superfamily NRK99_RS21530 PF03475 3-alpha domain NRK99_RS21530 PF03473 MOSC domain NRK99_RS21535 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS21540 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS21545 PF00005 ABC transporter NRK99_RS21545 PF08402 TOBE domain NRK99_RS21550 PF13416 Bacterial extracellular solute-binding protein NRK99_RS21555 PF13416 Bacterial extracellular solute-binding protein NRK99_RS21560 PF00202 Aminotransferase class-III NRK99_RS21565 PF00120 Glutamine synthetase, catalytic domain NRK99_RS21570 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRK99_RS21585 PF05981 CreA protein NRK99_RS21590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRK99_RS21590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRK99_RS21595 PF00012 Hsp70 protein NRK99_RS21600 PF03724 META domain NRK99_RS21610 PF00128 Alpha amylase, catalytic domain NRK99_RS21610 PF02903 Alpha amylase, N-terminal ig-like domain NRK99_RS21615 PF02719 Polysaccharide biosynthesis protein NRK99_RS21620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRK99_RS21630 PF13537 Glutamine amidotransferase domain NRK99_RS21630 PF00733 Asparagine synthase NRK99_RS21635 PF00534 Glycosyl transferases group 1 NRK99_RS21635 PF13439 Glycosyltransferase Family 4 NRK99_RS21650 PF03275 UDP-galactopyranose mutase NRK99_RS21655 PF00535 Glycosyl transferase family 2 NRK99_RS21670 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS21670 PF00501 AMP-binding enzyme NRK99_RS21690 PF02348 Cytidylyltransferase NRK99_RS21700 PF03102 NeuB family NRK99_RS21700 PF08666 SAF domain NRK99_RS21720 PF09940 Domain of unknown function (DUF2172) NRK99_RS21720 PF16254 Domain of unknown function (DUF4910) NRK99_RS21720 PF16221 winged helix-turn-helix NRK99_RS21755 PF05958 tRNA (Uracil-5-)-methyltransferase NRK99_RS21760 PF00072 Response regulator receiver domain NRK99_RS21760 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS21765 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS21765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS21765 PF00672 HAMP domain NRK99_RS21775 PF00390 Malic enzyme, N-terminal domain NRK99_RS21775 PF03949 Malic enzyme, NAD binding domain NRK99_RS21780 PF11066 Protein of unknown function (DUF2867) NRK99_RS21780 PF13460 NAD(P)H-binding NRK99_RS21785 PF01197 Ribosomal protein L31 NRK99_RS21790 PF00270 DEAD/DEAH box helicase NRK99_RS21790 PF00271 Helicase conserved C-terminal domain NRK99_RS21790 PF18074 Primosomal protein N C-terminal domain NRK99_RS21790 PF17764 3′ DNA-binding domain (3′BD) NRK99_RS21790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NRK99_RS21800 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS21810 PF01389 OmpA-like transmembrane domain NRK99_RS21810 PF00691 OmpA family NRK99_RS21815 PF00291 Pyridoxal-phosphate dependent enzyme NRK99_RS21815 PF00585 C-terminal regulatory domain of Threonine dehydratase NRK99_RS21820 PF00920 Dehydratase family NRK99_RS21825 PF01063 Amino-transferase class IV NRK99_RS21835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRK99_RS21835 PF00205 Thiamine pyrophosphate enzyme, central domain NRK99_RS21835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRK99_RS21840 PF13335 Magnesium chelatase, subunit ChlI C-terminal NRK99_RS21840 PF01078 Magnesium chelatase, subunit ChlI NRK99_RS21845 PF01553 Acyltransferase NRK99_RS21850 PF01553 Acyltransferase NRK99_RS21855 PF04463 Protein of unknown function (DUF523) NRK99_RS21865 PF00857 Isochorismatase family NRK99_RS21870 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NRK99_RS21870 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NRK99_RS21880 PF00005 ABC transporter NRK99_RS21885 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS21890 PF01323 DSBA-like thioredoxin domain NRK99_RS21895 PF01636 Phosphotransferase enzyme family NRK99_RS21900 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NRK99_RS21900 PF12801 4Fe-4S binding domain NRK99_RS21900 PF13746 4Fe-4S dicluster domain NRK99_RS21905 PF06288 Protein of unknown function (DUF1040) NRK99_RS21910 PF00563 EAL domain NRK99_RS21910 PF01590 GAF domain NRK99_RS21910 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS21910 PF00360 Phytochrome region NRK99_RS21915 PF09278 MerR, DNA binding NRK99_RS21915 PF00376 MerR family regulatory protein NRK99_RS21920 PF00403 Heavy-metal-associated domain NRK99_RS21925 PF00156 Phosphoribosyl transferase domain NRK99_RS21930 PF03725 3' exoribonuclease family, domain 2 NRK99_RS21930 PF01138 3' exoribonuclease family, domain 1 NRK99_RS21935 PF03755 YicC-like family, N-terminal region NRK99_RS21935 PF08340 Domain of unknown function (DUF1732) NRK99_RS21940 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRK99_RS21950 PF00550 Phosphopantetheine attachment site NRK99_RS21950 PF00668 Condensation domain NRK99_RS21950 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS21950 PF00501 AMP-binding enzyme NRK99_RS21955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NRK99_RS21960 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS21960 PF00668 Condensation domain NRK99_RS21960 PF00550 Phosphopantetheine attachment site NRK99_RS21960 PF00975 Thioesterase domain NRK99_RS21960 PF00501 AMP-binding enzyme NRK99_RS21970 PF04954 Siderophore-interacting protein NRK99_RS21970 PF08021 Siderophore-interacting FAD-binding domain NRK99_RS21970 PF00005 ABC transporter NRK99_RS21970 PF00664 ABC transporter transmembrane region NRK99_RS21975 PF00005 ABC transporter NRK99_RS21980 PF01032 FecCD transport family NRK99_RS21985 PF01032 FecCD transport family NRK99_RS21990 PF00005 ABC transporter NRK99_RS21995 PF01497 Periplasmic binding protein NRK99_RS22000 PF00593 TonB dependent receptor NRK99_RS22000 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS22020 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NRK99_RS22035 PF01370 NAD dependent epimerase/dehydratase family NRK99_RS22040 PF08360 QacR-like protein, C-terminal region NRK99_RS22040 PF00440 Bacterial regulatory proteins, tetR family NRK99_RS22045 PF00155 Aminotransferase class I and II NRK99_RS22050 PF00107 Zinc-binding dehydrogenase NRK99_RS22050 PF08240 Alcohol dehydrogenase GroES-like domain NRK99_RS22055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRK99_RS22060 PF13188 PAS domain NRK99_RS22060 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS22060 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS22060 PF00563 EAL domain NRK99_RS22065 PF00580 UvrD/REP helicase N-terminal domain NRK99_RS22065 PF13361 UvrD-like helicase C-terminal domain NRK99_RS22070 PF00266 Aminotransferase class-V NRK99_RS22075 PF02657 Fe-S metabolism associated domain NRK99_RS22080 PF00899 ThiF family NRK99_RS22110 PF12724 Flavodoxin domain NRK99_RS22115 PF02386 Cation transport protein NRK99_RS22120 PF09186 Domain of unknown function (DUF1949) NRK99_RS22120 PF01205 Uncharacterized protein family UPF0029 NRK99_RS22125 PF00557 Metallopeptidase family M24 NRK99_RS22130 PF13193 AMP-binding enzyme C-terminal domain NRK99_RS22130 PF00501 AMP-binding enzyme NRK99_RS22135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRK99_RS22135 PF00378 Enoyl-CoA hydratase/isomerase NRK99_RS22135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRK99_RS22140 PF00108 Thiolase, N-terminal domain NRK99_RS22140 PF02803 Thiolase, C-terminal domain NRK99_RS22145 PF00072 Response regulator receiver domain NRK99_RS22145 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS22150 PF00672 HAMP domain NRK99_RS22150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS22150 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS22155 PF01547 Bacterial extracellular solute-binding protein NRK99_RS22165 PF01206 Sulfurtransferase TusA NRK99_RS22170 PF01042 Endoribonuclease L-PSP NRK99_RS22180 PF00691 OmpA family NRK99_RS22180 PF13488 Glycine zipper NRK99_RS22185 PF00857 Isochorismatase family NRK99_RS22190 PF03352 Methyladenine glycosylase NRK99_RS22195 PF02091 Glycyl-tRNA synthetase alpha subunit NRK99_RS22200 PF05746 DALR anticodon binding domain NRK99_RS22200 PF02092 Glycyl-tRNA synthetase beta subunit NRK99_RS22215 PF14306 PUA-like domain NRK99_RS22215 PF01747 ATP-sulfurylase NRK99_RS22235 PF03496 ADP-ribosyltransferase exoenzyme NRK99_RS22235 PF03545 Yersinia virulence determinant (YopE) NRK99_RS22240 PF05932 Tir chaperone protein (CesT) family NRK99_RS22250 PF03222 Tryptophan/tyrosine permease family NRK99_RS22255 PF12801 4Fe-4S binding domain NRK99_RS22260 PF00392 Bacterial regulatory proteins, gntR family NRK99_RS22260 PF07702 UTRA domain NRK99_RS22265 PF00367 phosphotransferase system, EIIB NRK99_RS22265 PF02378 Phosphotransferase system, EIIC NRK99_RS22270 PF02056 Family 4 glycosyl hydrolase NRK99_RS22270 PF11975 Family 4 glycosyl hydrolase C-terminal domain NRK99_RS22275 PF00356 Bacterial regulatory proteins, lacI family NRK99_RS22280 PF13458 Periplasmic binding protein NRK99_RS22285 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS22290 PF11862 Domain of unknown function (DUF3382) NRK99_RS22290 PF02653 Branched-chain amino acid transport system / permease component NRK99_RS22295 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRK99_RS22295 PF00005 ABC transporter NRK99_RS22300 PF00005 ABC transporter NRK99_RS22315 PF00581 Rhodanese-like domain NRK99_RS22320 PF01694 Rhomboid family NRK99_RS22320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NRK99_RS22325 PF12262 Bacterial virulence factor lipase N-terminal NRK99_RS22330 PF04380 Membrane fusogenic activity NRK99_RS22335 PF00175 Oxidoreductase NAD-binding domain NRK99_RS22340 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NRK99_RS22350 PF07497 Rho termination factor, RNA-binding domain NRK99_RS22350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS22350 PF07498 Rho termination factor, N-terminal domain NRK99_RS22355 PF00085 Thioredoxin NRK99_RS22360 PF00270 DEAD/DEAH box helicase NRK99_RS22360 PF00271 Helicase conserved C-terminal domain NRK99_RS22365 PF02541 Ppx/GppA phosphatase family NRK99_RS22380 PF04445 Putative SAM-dependent methyltransferase NRK99_RS22385 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRK99_RS22390 PF00990 Diguanylate cyclase, GGDEF domain NRK99_RS22390 PF03707 Bacterial signalling protein N terminal repeat NRK99_RS22390 PF00563 EAL domain NRK99_RS22395 PF01432 Peptidase family M3 NRK99_RS22400 PF00490 Delta-aminolevulinic acid dehydratase NRK99_RS22405 PF01026 TatD related DNase NRK99_RS22410 PF00902 Sec-independent protein translocase protein (TatC) NRK99_RS22415 PF02416 mttA/Hcf106 family NRK99_RS22420 PF02416 mttA/Hcf106 family NRK99_RS22425 PF03109 ABC1 family NRK99_RS22430 PF02036 SCP-2 sterol transfer family NRK99_RS22435 PF01209 ubiE/COQ5 methyltransferase family NRK99_RS22440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NRK99_RS22445 PF07969 Amidohydrolase family NRK99_RS22490 PF03544 Gram-negative bacterial TonB protein C-terminal NRK99_RS22495 PF02472 Biopolymer transport protein ExbD/TolR NRK99_RS22500 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS22505 PF01618 MotA/TolQ/ExbB proton channel family NRK99_RS22515 PF03472 Autoinducer binding domain NRK99_RS22515 PF00196 Bacterial regulatory proteins, luxR family NRK99_RS22520 PF01380 SIS domain NRK99_RS22525 PF00455 DeoR C terminal sensor domain NRK99_RS22525 PF08220 DeoR-like helix-turn-helix domain NRK99_RS22530 PF00072 Response regulator receiver domain NRK99_RS22530 PF00486 Transcriptional regulatory protein, C terminal NRK99_RS22535 PF00672 HAMP domain NRK99_RS22535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRK99_RS22535 PF00512 His Kinase A (phospho-acceptor) domain NRK99_RS22540 PF00905 Penicillin binding protein transpeptidase domain NRK99_RS22545 PF06123 Inner membrane protein CreD NRK99_RS22550 PF12804 MobA-like NTP transferase domain NRK99_RS22550 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS22550 PF14602 Hexapeptide repeat of succinyl-transferase NRK99_RS22555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NRK99_RS22555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NRK99_RS22560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS22560 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRK99_RS22565 PF00231 ATP synthase NRK99_RS22570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRK99_RS22570 PF00306 ATP synthase alpha/beta chain, C terminal domain NRK99_RS22570 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRK99_RS22575 PF00213 ATP synthase delta (OSCP) subunit NRK99_RS22580 PF00430 ATP synthase B/B' CF(0) NRK99_RS22585 PF00137 ATP synthase subunit C NRK99_RS22590 PF00119 ATP synthase A chain NRK99_RS22600 PF02195 ParB-like nuclease domain NRK99_RS22600 PF17762 HTH domain found in ParB protein NRK99_RS22605 PF13614 AAA domain NRK99_RS22610 PF02527 rRNA small subunit methyltransferase G NRK99_RS22615 PF01134 Glucose inhibited division protein A NRK99_RS22615 PF13932 GidA associated domain NRK99_RS22620 PF00258 Flavodoxin NRK99_RS22625 PF07715 TonB-dependent Receptor Plug Domain NRK99_RS22625 PF00593 TonB dependent receptor NRK99_RS22630 PF00005 ABC transporter NRK99_RS22635 PF00005 ABC transporter NRK99_RS22645 PF01032 FecCD transport family NRK99_RS22650 PF13657 HipA N-terminal domain NRK99_RS22650 PF07804 HipA-like C-terminal domain NRK99_RS22665 PF13610 DDE domain NRK99_RS22680 PF00809 Pterin binding enzyme NRK99_RS22685 PF00893 Small Multidrug Resistance protein NRK99_RS22695 PF00132 Bacterial transferase hexapeptide (six repeats) NRK99_RS22705 PF13610 DDE domain NRK99_RS22710 PF01420 Type I restriction modification DNA specificity domain NRK99_RS22750 PF02899 Phage integrase, N-terminal SAM-like domain NRK99_RS22750 PF00589 Phage integrase family NRK99_RS22755 PF01926 50S ribosome-binding GTPase NRK99_RS22755 PF12631 MnmE helical domain NRK99_RS22755 PF10396 GTP-binding protein TrmE N-terminus NRK99_RS22760 PF02096 60Kd inner membrane protein NRK99_RS22760 PF14849 YidC periplasmic domain NRK99_RS22765 PF01809 Putative membrane protein insertion efficiency factor NRK99_RS22770 PF00825 Ribonuclease P NRK99_RS22775 PF00468 Ribosomal protein L34 NRK99_RS22780 PF00005 ABC transporter NRK99_RS22785 PF00528 Binding-protein-dependent transport system inner membrane component NRK99_RS22790 PF00497 Bacterial extracellular solute-binding proteins, family 3