CK627_RS00025	SM00344	helix_turn_helix ASNC type
CK627_RS00040	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS00045	SM00829	Enoylreductase
CK627_RS00065	SM00642	Alpha-amylase domain
CK627_RS00070	SM00642	Alpha-amylase domain
CK627_RS00080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CK627_RS00095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS00095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS00225	SM00382	ATPases associated with a variety of cellular activities
CK627_RS00230	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CK627_RS00235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS00235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS00295	SM01152	CK627_RS00295
CK627_RS00315	SM00382	ATPases associated with a variety of cellular activities
CK627_RS00330	SM00487	DEAD-like helicases superfamily
CK627_RS00330	SM00490	helicase superfamily c-terminal domain
CK627_RS00380	SM00411	bacterial (prokaryotic) histone like domain
CK627_RS00395	SM00382	ATPases associated with a variety of cellular activities
CK627_RS00420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS00420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS00420	SM00091	PAS domain
CK627_RS00420	SM00267	diguanylate cyclase
CK627_RS00435	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CK627_RS00440	SM01133	CK627_RS00440
CK627_RS00570	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS00735	SM01091	Transporter associated domain
CK627_RS00790	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CK627_RS00800	SM00382	ATPases associated with a variety of cellular activities
CK627_RS00810	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CK627_RS00810	SM00534	ATPase domain of DNA mismatch repair MUTS family
CK627_RS00825	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS00865	SM00382	ATPases associated with a variety of cellular activities
CK627_RS00885	SM00986	Uracil DNA glycosylase superfamily
CK627_RS00885	SM00987	UreE urease accessory protein, C-terminal domain 
CK627_RS00920	SM00563	Phosphate acyltransferases
CK627_RS00950	SM00271	DnaJ molecular chaperone homology domain
CK627_RS01010	SM00434	DNA Topoisomerase IV
CK627_RS01015	SM00387	Histidine kinase-like ATPases
CK627_RS01015	SM00433	TopoisomeraseII
CK627_RS01085	SM01118	CK627_RS01085
CK627_RS01110	SM00450	Rhodanese Homology Domain
CK627_RS01120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS01155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS01160	SM00382	ATPases associated with a variety of cellular activities
CK627_RS01170	SM00478	endonuclease III
CK627_RS01170	SM00525	CK627_RS01170
CK627_RS01195	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS01235	SM00267	diguanylate cyclase
CK627_RS01240	SM01130	CK627_RS01240
CK627_RS01310	SM00382	ATPases associated with a variety of cellular activities
CK627_RS01350	SM01266	CK627_RS01350
CK627_RS01355	SM00642	Alpha-amylase domain
CK627_RS01365	SM00354	helix_turn _helix lactose operon repressor
CK627_RS01380	SM00870	CK627_RS01380
CK627_RS01395	SM00851	MGS-like domain
CK627_RS01430	SM00260	Two component signalling adaptor domain
CK627_RS01430	SM00448	cheY-homologous receiver domain
CK627_RS01470	SM01207	CK627_RS01470
CK627_RS01475	SM00905	Dihydroneopterin aldolase
CK627_RS01495	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CK627_RS01525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS01525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS01530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS01555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS01555	SM00895	CK627_RS01555
CK627_RS01560	SM00644	CK627_RS01560
CK627_RS01625	SM00957	SecA DEAD-like domain
CK627_RS01625	SM00958	SecA preprotein cross-linking domain
CK627_RS01640	SM00864	Tubulin/FtsZ family, GTPase domain
CK627_RS01640	SM00865	Tubulin/FtsZ family, C-terminal domain
CK627_RS01645	SM00842	Cell division protein FtsA
CK627_RS01735	SM00749	bacterial OsmY and nodulation domain
CK627_RS01785	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CK627_RS01790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CK627_RS01870	SM00382	ATPases associated with a variety of cellular activities
CK627_RS01890	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS01895	SM00382	ATPases associated with a variety of cellular activities
CK627_RS01975	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS02005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS02005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS02015	SM00267	diguanylate cyclase
CK627_RS02025	SM00421	helix_turn_helix, Lux Regulon
CK627_RS02035	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS02055	SM00357	Cold shock protein domain
CK627_RS02065	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS02065	SM00267	diguanylate cyclase
CK627_RS02070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS02070	SM00387	Histidine kinase-like ATPases
CK627_RS02070	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS02075	SM00448	cheY-homologous receiver domain
CK627_RS02075	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS02095	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS02095	SM00091	PAS domain
CK627_RS02095	SM00267	diguanylate cyclase
CK627_RS02100	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS02165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS02165	SM00866	CK627_RS02165
CK627_RS02190	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02200	SM00267	diguanylate cyclase
CK627_RS02215	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS02215	SM00871	Bacterial transcription activator, effector binding domain
CK627_RS02245	SM00014	Acid phosphatase homologues
CK627_RS02255	SM00822	CK627_RS02255
CK627_RS02270	SM00091	PAS domain
CK627_RS02285	SM01120	CK627_RS02285
CK627_RS02340	SM00838	Elongation factor G C-terminus
CK627_RS02340	SM00889	Elongation factor G, domain IV
CK627_RS02380	SM00663	RNA polymerase I subunit A N-terminus
CK627_RS02405	SM00649	Ribosomal protein L11/L12
CK627_RS02410	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CK627_RS02410	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CK627_RS02465	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS02480	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CK627_RS02480	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CK627_RS02480	SM00493	CK627_RS02480
CK627_RS02500	SM00387	Histidine kinase-like ATPases
CK627_RS02505	SM00448	cheY-homologous receiver domain
CK627_RS02505	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS02540	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02540	SM00448	cheY-homologous receiver domain
CK627_RS02550	SM00387	Histidine kinase-like ATPases
CK627_RS02550	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS02570	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS02580	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS02585	SM00344	helix_turn_helix ASNC type
CK627_RS02595	SM00849	Metallo-beta-lactamase superfamily
CK627_RS02600	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02600	SM01086	C-terminal, D2-small domain, of ClpB protein
CK627_RS02610	SM00363	S4 RNA-binding domain
CK627_RS02645	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CK627_RS02645	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CK627_RS02655	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS02665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS02665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS02670	SM01118	CK627_RS02670
CK627_RS02740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS02740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS02750	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02760	SM01038	Beta galactosidase small chain
CK627_RS02765	SM00354	helix_turn _helix lactose operon repressor
CK627_RS02810	SM00464	Found in ATP-dependent protease La (LON)
CK627_RS02815	SM00836	DALR anticodon binding domain
CK627_RS02815	SM01016	Arginyl tRNA synthetase N terminal dom
CK627_RS02830	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02830	SM01086	C-terminal, D2-small domain, of ClpB protein
CK627_RS02865	SM00924	MgtE intracellular N domain
CK627_RS02870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS02870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS02870	SM01358	CK627_RS02870
CK627_RS02900	SM00341	Helicase and RNase D C-terminal
CK627_RS02900	SM00487	DEAD-like helicases superfamily
CK627_RS02900	SM00490	helicase superfamily c-terminal domain
CK627_RS02900	SM00956	CK627_RS02900
CK627_RS02935	SM00382	ATPases associated with a variety of cellular activities
CK627_RS02955	SM01230	CK627_RS02955
CK627_RS03000	SM00642	Alpha-amylase domain
CK627_RS03095	SM00984	UDP binding domain
CK627_RS03130	SM00822	CK627_RS03130
CK627_RS03155	SM00858	CK627_RS03155
CK627_RS03215	SM00448	cheY-homologous receiver domain
CK627_RS03215	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS03220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS03220	SM00387	Histidine kinase-like ATPases
CK627_RS03220	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS03230	SM00919	Malic enzyme, NAD binding domain
CK627_RS03230	SM01274	CK627_RS03230
CK627_RS03245	SM00487	DEAD-like helicases superfamily
CK627_RS03245	SM00490	helicase superfamily c-terminal domain
CK627_RS03295	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03300	SM00563	Phosphate acyltransferases
CK627_RS03305	SM00563	Phosphate acyltransferases
CK627_RS03330	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS03335	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03365	SM00267	diguanylate cyclase
CK627_RS03370	SM00422	helix_turn_helix, mercury resistance
CK627_RS03425	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03430	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03445	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03505	SM00829	Enoylreductase
CK627_RS03515	SM00052	Putative diguanylate phosphodiesterase
CK627_RS03515	SM00267	diguanylate cyclase
CK627_RS03565	SM00360	RNA recognition motif
CK627_RS03595	SM01001	AIR carboxylase
CK627_RS03610	SM00448	cheY-homologous receiver domain
CK627_RS03610	SM00850	LytTr DNA-binding domain
CK627_RS03615	SM00387	Histidine kinase-like ATPases
CK627_RS03640	SM00267	diguanylate cyclase
CK627_RS03685	SM00267	diguanylate cyclase
CK627_RS03705	SM00072	Guanylate kinase homologues.
CK627_RS03710	SM01409	CK627_RS03710
CK627_RS03715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS03715	SM00954	Region found in RelA / SpoT proteins
CK627_RS03745	SM00448	cheY-homologous receiver domain
CK627_RS03750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS03750	SM00387	Histidine kinase-like ATPases
CK627_RS03750	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS03765	SM00458	Ricin-type beta-trefoil
CK627_RS03810	SM00091	PAS domain
CK627_RS03810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS03810	SM00387	Histidine kinase-like ATPases
CK627_RS03840	SM00387	Histidine kinase-like ATPases
CK627_RS03840	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS03845	SM00448	cheY-homologous receiver domain
CK627_RS03845	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS03855	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS03890	SM00387	Histidine kinase-like ATPases
CK627_RS03890	SM00433	TopoisomeraseII
CK627_RS03900	SM00480	DNA polymerase III beta subunit
CK627_RS03905	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03905	SM00760	Bacterial dnaA protein helix-turn-helix domain
CK627_RS03910	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS03910	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CK627_RS03920	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03935	SM01234	CK627_RS03935
CK627_RS03960	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03965	SM00382	ATPases associated with a variety of cellular activities
CK627_RS03980	SM01228	CK627_RS03980
CK627_RS03995	SM00470	ParB-like nuclease domain
CK627_RS04035	SM00382	ATPases associated with a variety of cellular activities
CK627_RS04060	SM00387	Histidine kinase-like ATPases
CK627_RS04060	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS04065	SM00448	cheY-homologous receiver domain
CK627_RS04065	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS04070	SM00420	helix_turn_helix, Deoxyribose operon repressor
CK627_RS04070	SM01134	CK627_RS04070
CK627_RS04080	SM00421	helix_turn_helix, Lux Regulon
CK627_RS04190	SM01004	Delta-aminolevulinic acid dehydratase
CK627_RS04200	SM00052	Putative diguanylate phosphodiesterase
CK627_RS04200	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS04200	SM00091	PAS domain
CK627_RS04200	SM00267	diguanylate cyclase
CK627_RS04205	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS04230	SM00487	DEAD-like helicases superfamily
CK627_RS04230	SM00490	helicase superfamily c-terminal domain
CK627_RS04240	SM00357	Cold shock protein domain
CK627_RS04240	SM00382	ATPases associated with a variety of cellular activities
CK627_RS04240	SM00959	Rho termination factor, N-terminal domain
CK627_RS04275	SM00450	Rhodanese Homology Domain
CK627_RS04285	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS04290	SM00382	ATPases associated with a variety of cellular activities
CK627_RS04295	SM00382	ATPases associated with a variety of cellular activities
CK627_RS04315	SM00354	helix_turn _helix lactose operon repressor
CK627_RS04330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS04330	SM00866	CK627_RS04330
CK627_RS04385	SM00836	DALR anticodon binding domain
CK627_RS04400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS04400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS04430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS04430	SM00387	Histidine kinase-like ATPases
CK627_RS04430	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS04435	SM00448	cheY-homologous receiver domain
CK627_RS04435	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS04500	SM00881	CoA binding domain
CK627_RS04580	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CK627_RS04580	SM01232	CK627_RS04580
CK627_RS04630	SM00354	helix_turn _helix lactose operon repressor
CK627_RS04635	SM00829	Enoylreductase
CK627_RS04670	SM00563	Phosphate acyltransferases
CK627_RS04705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS04705	SM00387	Histidine kinase-like ATPases
CK627_RS04705	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS04710	SM00448	cheY-homologous receiver domain
CK627_RS04710	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS04720	SM00971	Serine acetyltransferase, N-terminal
CK627_RS04740	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CK627_RS04740	SM00474	3'-5' exonuclease
CK627_RS04740	SM00475	5'-3' exonuclease
CK627_RS04740	SM00482	DNA polymerase A domain
CK627_RS04785	SM00354	helix_turn _helix lactose operon repressor
CK627_RS04790	SM01038	Beta galactosidase small chain
CK627_RS04835	SM00829	Enoylreductase
CK627_RS04855	SM00382	ATPases associated with a variety of cellular activities
CK627_RS04875	SM01321	CK627_RS04875
CK627_RS04905	SM00326	Src homology 3 domains
CK627_RS04970	SM00831	Cation transporter/ATPase, N-terminus
CK627_RS04980	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS05000	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS05020	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CK627_RS05020	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CK627_RS05075	SM00257	Lysin motif
CK627_RS05095	SM01001	AIR carboxylase
CK627_RS05145	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS05155	SM00382	ATPases associated with a variety of cellular activities
CK627_RS05155	SM00448	cheY-homologous receiver domain
CK627_RS05160	SM00091	PAS domain
CK627_RS05160	SM00387	Histidine kinase-like ATPases
CK627_RS05160	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS05170	SM01230	CK627_RS05170
CK627_RS05210	SM00487	DEAD-like helicases superfamily
CK627_RS05210	SM00490	helicase superfamily c-terminal domain
CK627_RS05215	SM00155	Phospholipase D. Active site motifs.
CK627_RS05240	SM00354	helix_turn _helix lactose operon repressor
CK627_RS05260	SM00450	Rhodanese Homology Domain
CK627_RS05305	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS05305	SM00732	Likely ribonuclease with RNase H fold.
CK627_RS05315	SM00448	cheY-homologous receiver domain
CK627_RS05315	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS05320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS05320	SM00387	Histidine kinase-like ATPases
CK627_RS05320	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS05330	SM01403	CK627_RS05330
CK627_RS05350	SM01382	CK627_RS05350
CK627_RS05350	SM01383	CK627_RS05350
CK627_RS05365	SM00322	K homology RNA-binding domain
CK627_RS05385	SM01374	CK627_RS05385
CK627_RS05455	SM00363	S4 RNA-binding domain
CK627_RS05455	SM01390	CK627_RS05455
CK627_RS05460	SM00662	RNA polymerases D
CK627_RS05620	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS05625	SM00155	Phospholipase D. Active site motifs.
CK627_RS05655	SM00382	ATPases associated with a variety of cellular activities
CK627_RS05655	SM00962	SRP54-type protein, GTPase domain
CK627_RS05655	SM00963	SRP54-type protein, helical bundle domain
CK627_RS05660	SM00382	ATPases associated with a variety of cellular activities
CK627_RS05675	SM00947	Carbonic anhydrase
CK627_RS05680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS05680	SM00866	CK627_RS05680
CK627_RS05710	SM00052	Putative diguanylate phosphodiesterase
CK627_RS05715	SM00052	Putative diguanylate phosphodiesterase
CK627_RS05715	SM00267	diguanylate cyclase
CK627_RS05750	SM00965	Secretin and TonB N terminus short domain
CK627_RS05765	SM00382	ATPases associated with a variety of cellular activities
CK627_RS05835	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS05845	SM00886	Stress responsive A/B Barrel Domain
CK627_RS05885	SM00448	cheY-homologous receiver domain
CK627_RS05885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS05890	SM00387	Histidine kinase-like ATPases
CK627_RS05890	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS05890	SM00448	cheY-homologous receiver domain
CK627_RS05895	SM00331	Sigma factor PP2C-like phosphatases
CK627_RS05895	SM00387	Histidine kinase-like ATPases
CK627_RS05905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS05905	SM00091	PAS domain
CK627_RS05910	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS05955	SM01018	B12 binding domain
CK627_RS05965	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS05970	SM00448	cheY-homologous receiver domain
CK627_RS05970	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS05980	SM00999	Aerolysin toxin
CK627_RS06010	SM00876	Biotin and Thiamin Synthesis associated domain
CK627_RS06020	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS06055	SM00267	diguanylate cyclase
CK627_RS06165	SM01219	CK627_RS06165
CK627_RS06200	SM00100	Cyclic nucleotide-monophosphate binding domain
CK627_RS06230	SM00382	ATPases associated with a variety of cellular activities
CK627_RS06240	SM00852	Probable molybdopterin binding domain
CK627_RS06245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS06260	SM00344	helix_turn_helix ASNC type
CK627_RS06280	SM00642	Alpha-amylase domain
CK627_RS06420	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS06430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CK627_RS06480	SM00487	DEAD-like helicases superfamily
CK627_RS06480	SM00490	helicase superfamily c-terminal domain
CK627_RS06525	SM00271	DnaJ molecular chaperone homology domain
CK627_RS06560	SM00357	Cold shock protein domain
CK627_RS06560	SM00955	CK627_RS06560
CK627_RS06575	SM00421	helix_turn_helix, Lux Regulon
CK627_RS06610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS06610	SM00895	CK627_RS06610
CK627_RS06625	SM00363	S4 RNA-binding domain
CK627_RS06640	SM00382	ATPases associated with a variety of cellular activities
CK627_RS06690	SM00421	helix_turn_helix, Lux Regulon
CK627_RS06735	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS06765	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CK627_RS06815	SM01266	CK627_RS06815
CK627_RS06845	SM00382	ATPases associated with a variety of cellular activities
CK627_RS06860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS06860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS06860	SM01049	CK627_RS06860
CK627_RS06895	SM00245	tail specific protease
CK627_RS06975	SM00487	DEAD-like helicases superfamily
CK627_RS06975	SM00490	helicase superfamily c-terminal domain
CK627_RS07055	SM00938	Nitrogen regulatory protein P-II
CK627_RS07070	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07085	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07090	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS07090	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CK627_RS07110	SM00671	Sel1-like repeats.
CK627_RS07125	SM01091	Transporter associated domain
CK627_RS07135	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07135	SM00962	SRP54-type protein, GTPase domain
CK627_RS07135	SM00963	SRP54-type protein, helical bundle domain
CK627_RS07165	SM00927	DNA mismatch repair enzyme MutH
CK627_RS07175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS07205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CK627_RS07220	SM00904	Riboflavin kinase
CK627_RS07305	SM00938	Nitrogen regulatory protein P-II
CK627_RS07320	SM00267	diguanylate cyclase
CK627_RS07325	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS07325	SM00357	Cold shock protein domain
CK627_RS07325	SM00955	CK627_RS07325
CK627_RS07365	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CK627_RS07465	SM00829	Enoylreductase
CK627_RS07505	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07510	SM00327	von Willebrand factor (vWF) type A domain
CK627_RS07520	SM00344	helix_turn_helix ASNC type
CK627_RS07525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS07525	SM00091	PAS domain
CK627_RS07525	SM00267	diguanylate cyclase
CK627_RS07535	SM00267	diguanylate cyclase
CK627_RS07550	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS07585	SM00849	Metallo-beta-lactamase superfamily
CK627_RS07610	SM00487	DEAD-like helicases superfamily
CK627_RS07610	SM00490	helicase superfamily c-terminal domain
CK627_RS07700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS07700	SM00387	Histidine kinase-like ATPases
CK627_RS07700	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS07705	SM00448	cheY-homologous receiver domain
CK627_RS07705	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS07715	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07720	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS07725	SM00382	ATPases associated with a variety of cellular activities
CK627_RS07760	SM00822	CK627_RS07760
CK627_RS07775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS07775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS07785	SM00287	Bacterial SH3 domain homologues
CK627_RS07810	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CK627_RS07925	SM00358	Double-stranded RNA binding motif
CK627_RS07925	SM00535	Ribonuclease III family
CK627_RS08000	SM00420	helix_turn_helix, Deoxyribose operon repressor
CK627_RS08000	SM01134	CK627_RS08000
CK627_RS08005	SM00644	CK627_RS08005
CK627_RS08015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS08015	SM00387	Histidine kinase-like ATPases
CK627_RS08015	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS08015	SM00448	cheY-homologous receiver domain
CK627_RS08025	SM00954	Region found in RelA / SpoT proteins
CK627_RS08040	SM01192	CK627_RS08040
CK627_RS08040	SM01193	CK627_RS08040
CK627_RS08080	SM00257	Lysin motif
CK627_RS08105	SM00400	zinc finger
CK627_RS08105	SM00493	CK627_RS08105
CK627_RS08105	SM00766	DNA primase DnaG DnaB-binding
CK627_RS08135	SM00778	Zinc-binding domain of primase-helicase
CK627_RS08190	SM01209	CK627_RS08190
CK627_RS08190	SM01210	CK627_RS08190
CK627_RS08195	SM00798	AICARFT/IMPCHase bienzyme
CK627_RS08195	SM00851	MGS-like domain
CK627_RS08200	SM00422	helix_turn_helix, mercury resistance
CK627_RS08215	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS08290	SM00883	Chaperonin 10 Kd subunit
CK627_RS08305	SM00052	Putative diguanylate phosphodiesterase
CK627_RS08305	SM00267	diguanylate cyclase
CK627_RS08320	SM00260	Two component signalling adaptor domain
CK627_RS08320	SM00448	cheY-homologous receiver domain
CK627_RS08330	SM00382	ATPases associated with a variety of cellular activities
CK627_RS08345	SM00052	Putative diguanylate phosphodiesterase
CK627_RS08375	SM00450	Rhodanese Homology Domain
CK627_RS08390	SM00382	ATPases associated with a variety of cellular activities
CK627_RS08425	SM00052	Putative diguanylate phosphodiesterase
CK627_RS08425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS08425	SM00091	PAS domain
CK627_RS08425	SM00267	diguanylate cyclase
CK627_RS08460	SM00479	CK627_RS08460
CK627_RS08500	SM00357	Cold shock protein domain
CK627_RS08510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS08510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS08555	SM00495	Chitin-binding domain type 3
CK627_RS08555	SM00636	CK627_RS08555
CK627_RS08560	SM00028	Tetratricopeptide repeats
CK627_RS08610	SM00382	ATPases associated with a variety of cellular activities
CK627_RS08615	SM00382	ATPases associated with a variety of cellular activities
CK627_RS08655	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CK627_RS08700	SM01057	Eukaryotic-type carbonic anhydrase
CK627_RS08710	SM00477	DNA/RNA non-specific endonuclease
CK627_RS08710	SM00892	DNA/RNA non-specific endonuclease
CK627_RS08735	SM00563	Phosphate acyltransferases
CK627_RS08795	SM00825	Beta-ketoacyl synthase
CK627_RS08805	SM00822	CK627_RS08805
CK627_RS08810	SM00825	Beta-ketoacyl synthase
CK627_RS08820	SM00852	Probable molybdopterin binding domain
CK627_RS08845	SM00382	ATPases associated with a variety of cellular activities
CK627_RS08890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS08890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS08900	SM00870	CK627_RS08900
CK627_RS08910	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CK627_RS08935	SM00869	Autotransporter beta-domain
CK627_RS08945	SM01266	CK627_RS08945
CK627_RS08960	SM00829	Enoylreductase
CK627_RS08985	SM00878	Biotin carboxylase C-terminal domain
CK627_RS09010	SM00052	Putative diguanylate phosphodiesterase
CK627_RS09010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS09010	SM00091	PAS domain
CK627_RS09010	SM00267	diguanylate cyclase
CK627_RS09045	SM00448	cheY-homologous receiver domain
CK627_RS09045	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS09060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS09060	SM00387	Histidine kinase-like ATPases
CK627_RS09060	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS09060	SM00448	cheY-homologous receiver domain
CK627_RS09125	SM00382	ATPases associated with a variety of cellular activities
CK627_RS09145	SM00861	Transketolase, pyrimidine binding domain
CK627_RS09180	SM01103	CK627_RS09180
CK627_RS09190	SM00382	ATPases associated with a variety of cellular activities
CK627_RS09230	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS09250	SM01387	CK627_RS09250
CK627_RS09255	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS09255	SM00322	K homology RNA-binding domain
CK627_RS09265	SM00267	diguanylate cyclase
CK627_RS09345	SM00267	diguanylate cyclase
CK627_RS09365	SM00422	helix_turn_helix, mercury resistance
CK627_RS09425	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS09440	SM00936	Penicillin-binding protein 5, C-terminal domain 
CK627_RS09505	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS09505	SM01091	Transporter associated domain
CK627_RS09520	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS09535	SM00357	Cold shock protein domain
CK627_RS09540	SM00267	diguanylate cyclase
CK627_RS09565	SM00267	diguanylate cyclase
CK627_RS09590	SM00841	Elongation factor P, C-terminal
CK627_RS09590	SM01185	CK627_RS09590
CK627_RS09600	SM01240	CK627_RS09600
CK627_RS09610	SM00387	Histidine kinase-like ATPases
CK627_RS09610	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS09615	SM00448	cheY-homologous receiver domain
CK627_RS09615	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS09625	SM00822	CK627_RS09625
CK627_RS09630	SM01236	CK627_RS09630
CK627_RS09695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS09695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS09735	SM00849	Metallo-beta-lactamase superfamily
CK627_RS09745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS09745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS09760	SM00842	Cell division protein FtsA
CK627_RS09780	SM00965	Secretin and TonB N terminus short domain
CK627_RS09845	SM01150	CK627_RS09845
CK627_RS09860	SM00890	Domain of unknown function
CK627_RS09880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS09890	SM00382	ATPases associated with a variety of cellular activities
CK627_RS09905	SM00642	Alpha-amylase domain
CK627_RS09915	SM01022	CK627_RS09915
CK627_RS09920	SM00100	Cyclic nucleotide-monophosphate binding domain
CK627_RS09995	SM01400	CK627_RS09995
CK627_RS10020	SM00937	CK627_RS10020
CK627_RS10055	SM00986	Uracil DNA glycosylase superfamily
CK627_RS10055	SM00987	UreE urease accessory protein, C-terminal domain 
CK627_RS10080	SM00460	Transglutaminase/protease-like homologues
CK627_RS10090	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10105	SM00732	Likely ribonuclease with RNase H fold.
CK627_RS10115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS10115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS10135	SM00731	SprT homologues.
CK627_RS10145	SM00861	Transketolase, pyrimidine binding domain
CK627_RS10175	SM00363	S4 RNA-binding domain
CK627_RS10185	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS10195	SM00788	Adenylosuccinate synthetase
CK627_RS10225	SM00822	CK627_RS10225
CK627_RS10240	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CK627_RS10240	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CK627_RS10240	SM00493	CK627_RS10240
CK627_RS10255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS10275	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10280	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10300	SM00091	PAS domain
CK627_RS10300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS10300	SM00387	Histidine kinase-like ATPases
CK627_RS10300	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS10300	SM00448	cheY-homologous receiver domain
CK627_RS10330	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS10360	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS10360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS10370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS10380	SM00852	Probable molybdopterin binding domain
CK627_RS10390	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10405	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10405	SM00448	cheY-homologous receiver domain
CK627_RS10410	SM00387	Histidine kinase-like ATPases
CK627_RS10410	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS10455	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CK627_RS10470	SM00919	Malic enzyme, NAD binding domain
CK627_RS10470	SM01274	CK627_RS10470
CK627_RS10490	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS10495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS10495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS10570	SM00267	diguanylate cyclase
CK627_RS10595	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS10610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS10635	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10640	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10655	SM00448	cheY-homologous receiver domain
CK627_RS10655	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS10720	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10745	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS10745	SM00387	Histidine kinase-like ATPases
CK627_RS10745	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS10745	SM00448	cheY-homologous receiver domain
CK627_RS10745	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
CK627_RS10750	SM00267	diguanylate cyclase
CK627_RS10750	SM00448	cheY-homologous receiver domain
CK627_RS10755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS10755	SM00091	PAS domain
CK627_RS10755	SM00387	Histidine kinase-like ATPases
CK627_RS10755	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS10755	SM00448	cheY-homologous receiver domain
CK627_RS10755	SM01079	CK627_RS10755
CK627_RS10800	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS10820	SM00528	Domain in histone-like proteins of HNS family
CK627_RS10840	SM00382	ATPases associated with a variety of cellular activities
CK627_RS10855	SM01131	CK627_RS10855
CK627_RS10880	SM00271	DnaJ molecular chaperone homology domain
CK627_RS10900	SM00640	Glycosyl hydrolases family 32
CK627_RS10905	SM00354	helix_turn _helix lactose operon repressor
CK627_RS10925	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CK627_RS10950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS10950	SM00091	PAS domain
CK627_RS10950	SM00267	diguanylate cyclase
CK627_RS11010	SM00028	Tetratricopeptide repeats
CK627_RS11010	SM00448	cheY-homologous receiver domain
CK627_RS11115	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11120	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS11140	SM00247	Beta/gamma crystallins
CK627_RS11210	SM00481	DNA polymerase alpha chain like domain
CK627_RS11230	SM00363	S4 RNA-binding domain
CK627_RS11315	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11405	SM00226	Low molecular weight phosphatase family
CK627_RS11445	SM00487	DEAD-like helicases superfamily
CK627_RS11445	SM00490	helicase superfamily c-terminal domain
CK627_RS11470	SM00861	Transketolase, pyrimidine binding domain
CK627_RS11480	SM00357	Cold shock protein domain
CK627_RS11515	SM00420	helix_turn_helix, Deoxyribose operon repressor
CK627_RS11515	SM01134	CK627_RS11515
CK627_RS11540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS11545	SM00363	S4 RNA-binding domain
CK627_RS11575	SM00858	CK627_RS11575
CK627_RS11580	SM00260	Two component signalling adaptor domain
CK627_RS11580	SM00448	cheY-homologous receiver domain
CK627_RS11585	SM00138	Methyltransferase, chemotaxis proteins 
CK627_RS11630	SM00047	Lysozyme subfamily 2
CK627_RS11645	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS11645	SM00924	MgtE intracellular N domain
CK627_RS11670	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11675	SM00091	PAS domain
CK627_RS11675	SM00387	Histidine kinase-like ATPases
CK627_RS11675	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS11680	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11680	SM00448	cheY-homologous receiver domain
CK627_RS11750	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11760	SM01091	Transporter associated domain
CK627_RS11795	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11805	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS11805	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CK627_RS11815	SM00387	Histidine kinase-like ATPases
CK627_RS11820	SM00421	helix_turn_helix, Lux Regulon
CK627_RS11820	SM00448	cheY-homologous receiver domain
CK627_RS11845	SM00098	Alkaline phosphatase homologues
CK627_RS11850	SM00098	Alkaline phosphatase homologues
CK627_RS11875	SM00491	CK627_RS11875
CK627_RS11910	SM00849	Metallo-beta-lactamase superfamily
CK627_RS11915	SM00382	ATPases associated with a variety of cellular activities
CK627_RS11935	SM00421	helix_turn_helix, Lux Regulon
CK627_RS11935	SM00448	cheY-homologous receiver domain
CK627_RS11940	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CK627_RS11940	SM00465	GIY-YIG type nucleases (URI domain)
CK627_RS12030	SM00840	CK627_RS12030
CK627_RS12060	SM00267	diguanylate cyclase
CK627_RS12065	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS12100	SM00899	CK627_RS12100
CK627_RS12125	SM00382	ATPases associated with a variety of cellular activities
CK627_RS12135	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS12145	SM00382	ATPases associated with a variety of cellular activities
CK627_RS12185	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CK627_RS12190	SM00851	MGS-like domain
CK627_RS12190	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CK627_RS12195	SM00917	LeuA allosteric (dimerisation) domain
CK627_RS12245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS12260	SM00487	DEAD-like helicases superfamily
CK627_RS12260	SM00490	helicase superfamily c-terminal domain
CK627_RS12270	SM01351	CK627_RS12270
CK627_RS12285	SM00422	helix_turn_helix, mercury resistance
CK627_RS12310	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS12315	SM00382	ATPases associated with a variety of cellular activities
CK627_RS12335	SM00052	Putative diguanylate phosphodiesterase
CK627_RS12335	SM00267	diguanylate cyclase
CK627_RS12340	SM00327	von Willebrand factor (vWF) type A domain
CK627_RS12375	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS12380	SM01217	CK627_RS12380
CK627_RS12415	SM00014	Acid phosphatase homologues
CK627_RS12425	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CK627_RS12500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS12505	SM00267	diguanylate cyclase
CK627_RS12575	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS12575	SM01091	Transporter associated domain
CK627_RS12600	SM00487	DEAD-like helicases superfamily
CK627_RS12600	SM00490	helicase superfamily c-terminal domain
CK627_RS12610	SM00479	CK627_RS12610
CK627_RS12615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS12630	SM00478	endonuclease III
CK627_RS12630	SM00525	CK627_RS12630
CK627_RS12640	SM00900	CK627_RS12640
CK627_RS12670	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS12670	SM00091	PAS domain
CK627_RS12670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS12680	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS12855	SM00959	Rho termination factor, N-terminal domain
CK627_RS12950	SM00487	DEAD-like helicases superfamily
CK627_RS12950	SM00490	helicase superfamily c-terminal domain
CK627_RS12970	SM00448	cheY-homologous receiver domain
CK627_RS12970	SM00850	LytTr DNA-binding domain
CK627_RS12975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS12980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS13015	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13020	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13030	SM01005	Alanine racemase, C-terminal domain
CK627_RS13065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS13065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS13115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS13115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS13280	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13375	SM01005	Alanine racemase, C-terminal domain
CK627_RS13425	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13430	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS13540	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13550	SM00493	CK627_RS13550
CK627_RS13555	SM00387	Histidine kinase-like ATPases
CK627_RS13595	SM00052	Putative diguanylate phosphodiesterase
CK627_RS13595	SM00267	diguanylate cyclase
CK627_RS13630	SM00823	Phosphopantetheine attachment site
CK627_RS13635	SM00822	CK627_RS13635
CK627_RS13640	SM00823	Phosphopantetheine attachment site
CK627_RS13660	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13705	SM00893	Electron transfer flavoprotein domain
CK627_RS13710	SM00893	Electron transfer flavoprotein domain
CK627_RS13730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS13730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS13735	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS13770	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS13770	SM01240	CK627_RS13770
CK627_RS13830	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS13840	SM00364	Leucine-rich repeats, bacterial type
CK627_RS13840	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CK627_RS13855	SM00855	Phosphoglycerate mutase family
CK627_RS13880	SM00487	DEAD-like helicases superfamily
CK627_RS13880	SM00490	helicase superfamily c-terminal domain
CK627_RS13880	SM00982	CK627_RS13880
CK627_RS13880	SM01058	CarD-like/TRCF domain
CK627_RS13895	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS13930	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13930	SM00994	ClpX C4-type zinc finger
CK627_RS13930	SM01086	C-terminal, D2-small domain, of ClpB protein
CK627_RS13935	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13935	SM00464	Found in ATP-dependent protease La (LON)
CK627_RS13940	SM00411	bacterial (prokaryotic) histone like domain
CK627_RS13950	SM00382	ATPases associated with a variety of cellular activities
CK627_RS13965	SM00479	CK627_RS13965
CK627_RS13970	SM00100	Cyclic nucleotide-monophosphate binding domain
CK627_RS13970	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS14010	SM00422	helix_turn_helix, mercury resistance
CK627_RS14020	SM00878	Biotin carboxylase C-terminal domain
CK627_RS14020	SM01209	CK627_RS14020
CK627_RS14065	SM00822	CK627_RS14065
CK627_RS14120	SM00387	Histidine kinase-like ATPases
CK627_RS14120	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS14120	SM00448	cheY-homologous receiver domain
CK627_RS14150	SM00331	Sigma factor PP2C-like phosphatases
CK627_RS14150	SM00448	cheY-homologous receiver domain
CK627_RS14250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS14255	SM00822	CK627_RS14255
CK627_RS14265	SM00518	AP endonuclease family 2
CK627_RS14295	SM00090	RIO-like kinase
CK627_RS14305	SM00267	diguanylate cyclase
CK627_RS14315	SM00486	DNA polymerase type-B family
CK627_RS14400	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS14485	SM00422	helix_turn_helix, mercury resistance
CK627_RS14495	SM00052	Putative diguanylate phosphodiesterase
CK627_RS14525	SM00028	Tetratricopeptide repeats
CK627_RS14530	SM00327	von Willebrand factor (vWF) type A domain
CK627_RS14565	SM01322	CK627_RS14565
CK627_RS14580	SM00382	ATPases associated with a variety of cellular activities
CK627_RS14640	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CK627_RS14645	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CK627_RS14665	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CK627_RS14670	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CK627_RS14680	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CK627_RS14725	SM00073	Histidine Phosphotransfer domain
CK627_RS14725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS14725	SM00091	PAS domain
CK627_RS14725	SM00387	Histidine kinase-like ATPases
CK627_RS14725	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS14725	SM00448	cheY-homologous receiver domain
CK627_RS14730	SM00091	PAS domain
CK627_RS14735	SM00448	cheY-homologous receiver domain
CK627_RS14735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS14775	SM00491	CK627_RS14775
CK627_RS14800	SM00341	Helicase and RNase D C-terminal
CK627_RS14800	SM00474	3'-5' exonuclease
CK627_RS14805	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS14830	SM00382	ATPases associated with a variety of cellular activities
CK627_RS14855	SM00421	helix_turn_helix, Lux Regulon
CK627_RS14860	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS14865	SM00382	ATPases associated with a variety of cellular activities
CK627_RS14865	SM00487	DEAD-like helicases superfamily
CK627_RS14865	SM00490	helicase superfamily c-terminal domain
CK627_RS14865	SM00847	Helicase associated domain (HA2)  Add an annotation
CK627_RS14880	SM00387	Histidine kinase-like ATPases
CK627_RS14880	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS14880	SM00448	cheY-homologous receiver domain
CK627_RS14885	SM00448	cheY-homologous receiver domain
CK627_RS14885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS14890	SM00849	Metallo-beta-lactamase superfamily
CK627_RS14895	SM00450	Rhodanese Homology Domain
CK627_RS14915	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CK627_RS14920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS14960	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS14965	SM00363	S4 RNA-binding domain
CK627_RS15015	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CK627_RS15020	SM00822	CK627_RS15020
CK627_RS15030	SM00825	Beta-ketoacyl synthase
CK627_RS15050	SM00382	ATPases associated with a variety of cellular activities
CK627_RS15140	SM00822	CK627_RS15140
CK627_RS15265	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS15290	SM00382	ATPases associated with a variety of cellular activities
CK627_RS15300	SM00981	CK627_RS15300
CK627_RS15330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CK627_RS15330	SM00245	tail specific protease
CK627_RS15335	SM00945	ProQ/FINO family
CK627_RS15390	SM00100	Cyclic nucleotide-monophosphate binding domain
CK627_RS15390	SM00419	helix_turn_helix, cAMP Regulatory protein
CK627_RS15425	SM00382	ATPases associated with a variety of cellular activities
CK627_RS15445	SM00354	helix_turn _helix lactose operon repressor
CK627_RS15450	SM00267	diguanylate cyclase
CK627_RS15475	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS15475	SM00387	Histidine kinase-like ATPases
CK627_RS15475	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS15475	SM00448	cheY-homologous receiver domain
CK627_RS15480	SM00411	bacterial (prokaryotic) histone like domain
CK627_RS15485	SM00873	B3/4 domain
CK627_RS15485	SM00874	tRNA synthetase B5 domain
CK627_RS15485	SM00896	Ferredoxin-fold anticodon binding domain
CK627_RS15510	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CK627_RS15515	SM00671	Sel1-like repeats.
CK627_RS15520	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS15525	SM00434	DNA Topoisomerase IV
CK627_RS15555	SM00925	MltA specific insert domain
CK627_RS15580	SM00354	helix_turn _helix lactose operon repressor
CK627_RS15600	SM00487	DEAD-like helicases superfamily
CK627_RS15600	SM00490	helicase superfamily c-terminal domain
CK627_RS15605	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS15620	SM00463	Small MutS-related domain
CK627_RS15630	SM00091	PAS domain
CK627_RS15630	SM00267	diguanylate cyclase
CK627_RS15635	SM00855	Phosphoglycerate mutase family
CK627_RS15650	SM00495	Chitin-binding domain type 3
CK627_RS15660	SM00782	PhnA Zinc-Ribbon
CK627_RS15845	SM00642	Alpha-amylase domain
CK627_RS15860	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS15880	SM01144	CK627_RS15880
CK627_RS15895	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CK627_RS15905	SM00487	DEAD-like helicases superfamily
CK627_RS15905	SM00490	helicase superfamily c-terminal domain
CK627_RS15925	SM01118	CK627_RS15925
CK627_RS15995	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16005	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16010	SM00387	Histidine kinase-like ATPases
CK627_RS16010	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS16010	SM00448	cheY-homologous receiver domain
CK627_RS16070	SM00487	DEAD-like helicases superfamily
CK627_RS16070	SM00490	helicase superfamily c-terminal domain
CK627_RS16075	SM00763	PrkA AAA domain
CK627_RS16090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS16115	SM00487	DEAD-like helicases superfamily
CK627_RS16115	SM00490	helicase superfamily c-terminal domain
CK627_RS16135	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS16155	SM00448	cheY-homologous receiver domain
CK627_RS16160	SM00387	Histidine kinase-like ATPases
CK627_RS16170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS16170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS16170	SM01049	CK627_RS16170
CK627_RS16260	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS16290	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS16290	SM00871	Bacterial transcription activator, effector binding domain
CK627_RS16295	SM00822	CK627_RS16295
CK627_RS16325	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CK627_RS16365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS16365	SM00866	CK627_RS16365
CK627_RS16375	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16395	SM00881	CoA binding domain
CK627_RS16410	SM00861	Transketolase, pyrimidine binding domain
CK627_RS16450	SM00825	Beta-ketoacyl synthase
CK627_RS16570	SM00267	diguanylate cyclase
CK627_RS16570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS16580	SM00091	PAS domain
CK627_RS16580	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16625	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16645	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16650	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16675	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16685	SM00843	CK627_RS16685
CK627_RS16690	SM00344	helix_turn_helix ASNC type
CK627_RS16700	SM00267	diguanylate cyclase
CK627_RS16700	SM00448	cheY-homologous receiver domain
CK627_RS16720	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS16725	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16725	SM01086	C-terminal, D2-small domain, of ClpB protein
CK627_RS16735	SM00357	Cold shock protein domain
CK627_RS16795	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16800	SM00382	ATPases associated with a variety of cellular activities
CK627_RS16800	SM01086	C-terminal, D2-small domain, of ClpB protein
CK627_RS16850	SM00671	Sel1-like repeats.
CK627_RS16895	SM01154	CK627_RS16895
CK627_RS16910	SM00528	Domain in histone-like proteins of HNS family
CK627_RS16935	SM01144	CK627_RS16935
CK627_RS16945	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CK627_RS16950	SM00028	Tetratricopeptide repeats
CK627_RS16960	SM00411	bacterial (prokaryotic) histone like domain
CK627_RS16965	SM00316	Ribosomal protein S1-like RNA-binding domain
CK627_RS17010	SM00052	Putative diguanylate phosphodiesterase
CK627_RS17010	SM00267	diguanylate cyclase
CK627_RS17025	SM00448	cheY-homologous receiver domain
CK627_RS17030	SM00091	PAS domain
CK627_RS17055	SM00360	RNA recognition motif
CK627_RS17125	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CK627_RS17130	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CK627_RS17130	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CK627_RS17170	SM00897	FIST N domain
CK627_RS17170	SM01204	CK627_RS17170
CK627_RS17175	SM00091	PAS domain
CK627_RS17175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS17180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS17185	SM01211	CK627_RS17185
CK627_RS17190	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS17210	SM00564	beta-propeller repeat
CK627_RS17230	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS17235	SM00028	Tetratricopeptide repeats
CK627_RS17245	SM00562	CK627_RS17245
CK627_RS17270	SM00271	DnaJ molecular chaperone homology domain
CK627_RS17320	SM00028	Tetratricopeptide repeats
CK627_RS17325	SM00450	Rhodanese Homology Domain
CK627_RS17340	SM01323	CK627_RS17340
CK627_RS17355	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS17375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CK627_RS17375	SM00387	Histidine kinase-like ATPases
CK627_RS17460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS17460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS17540	SM00981	CK627_RS17540
CK627_RS17555	SM01359	CK627_RS17555
CK627_RS17555	SM01360	CK627_RS17555
CK627_RS17560	SM00450	Rhodanese Homology Domain
CK627_RS17565	SM00052	Putative diguanylate phosphodiesterase
CK627_RS17565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CK627_RS17565	SM00091	PAS domain
CK627_RS17565	SM00267	diguanylate cyclase
CK627_RS17590	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS17590	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CK627_RS17595	SM00382	ATPases associated with a variety of cellular activities
CK627_RS17665	SM00382	ATPases associated with a variety of cellular activities
CK627_RS17740	SM00830	Chorismate mutase type II
CK627_RS17760	SM00420	helix_turn_helix, Deoxyribose operon repressor
CK627_RS17760	SM01134	CK627_RS17760
CK627_RS17780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS17780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS17860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CK627_RS17895	SM00871	Bacterial transcription activator, effector binding domain
CK627_RS17925	SM00363	S4 RNA-binding domain
CK627_RS17950	SM00507	HNH nucleases
CK627_RS17955	SM00855	Phosphoglycerate mutase family
CK627_RS17980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS18000	SM00849	Metallo-beta-lactamase superfamily
CK627_RS18030	SM00563	Phosphate acyltransferases
CK627_RS18040	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CK627_RS18050	SM00867	YceI-like domain 
CK627_RS18070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS18070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS18080	SM00852	Probable molybdopterin binding domain
CK627_RS18095	SM00382	ATPases associated with a variety of cellular activities
CK627_RS18125	SM00852	Probable molybdopterin binding domain
CK627_RS18150	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CK627_RS18165	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS18170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS18170	SM00387	Histidine kinase-like ATPases
CK627_RS18175	SM00421	helix_turn_helix, Lux Regulon
CK627_RS18175	SM00448	cheY-homologous receiver domain
CK627_RS18180	SM00464	Found in ATP-dependent protease La (LON)
CK627_RS18185	SM00387	Histidine kinase-like ATPases
CK627_RS18185	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS18185	SM00448	cheY-homologous receiver domain
CK627_RS18190	SM00897	FIST N domain
CK627_RS18190	SM01204	CK627_RS18190
CK627_RS18220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS18230	SM00479	CK627_RS18230
CK627_RS18245	SM00849	Metallo-beta-lactamase superfamily
CK627_RS18250	SM00257	Lysin motif
CK627_RS18275	SM00354	helix_turn _helix lactose operon repressor
CK627_RS18285	SM00052	Putative diguanylate phosphodiesterase
CK627_RS18285	SM00267	diguanylate cyclase
CK627_RS18360	SM00382	ATPases associated with a variety of cellular activities
CK627_RS18385	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS18440	SM01081	Putative carbohydrate binding domain
CK627_RS18525	SM00458	Ricin-type beta-trefoil
CK627_RS18600	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS18610	SM00890	Domain of unknown function
CK627_RS18625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS18650	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS18650	SM00876	Biotin and Thiamin Synthesis associated domain
CK627_RS18660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS18725	SM01091	Transporter associated domain
CK627_RS18750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS18750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS18795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CK627_RS18945	SM00028	Tetratricopeptide repeats
CK627_RS18970	SM01329	CK627_RS18970
CK627_RS18975	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS19015	SM00354	helix_turn _helix lactose operon repressor
CK627_RS19025	SM00422	helix_turn_helix, mercury resistance
CK627_RS19095	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CK627_RS19195	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19205	SM00260	Two component signalling adaptor domain
CK627_RS19210	SM00260	Two component signalling adaptor domain
CK627_RS19230	SM00448	cheY-homologous receiver domain
CK627_RS19235	SM00073	Histidine Phosphotransfer domain
CK627_RS19235	SM00260	Two component signalling adaptor domain
CK627_RS19235	SM00387	Histidine kinase-like ATPases
CK627_RS19235	SM01231	CK627_RS19235
CK627_RS19245	SM00448	cheY-homologous receiver domain
CK627_RS19260	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19260	SM00962	SRP54-type protein, GTPase domain
CK627_RS19320	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19365	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CK627_RS19395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS19400	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS19420	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19430	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19435	SM00448	cheY-homologous receiver domain
CK627_RS19435	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS19440	SM00387	Histidine kinase-like ATPases
CK627_RS19480	SM00481	DNA polymerase alpha chain like domain
CK627_RS19520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS19520	SM00387	Histidine kinase-like ATPases
CK627_RS19520	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS19525	SM00448	cheY-homologous receiver domain
CK627_RS19525	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS19610	SM00155	Phospholipase D. Active site motifs.
CK627_RS19630	SM00642	Alpha-amylase domain
CK627_RS19685	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS19700	SM00729	Elongator protein 3, MiaB family, Radical SAM
CK627_RS19720	SM00267	diguanylate cyclase
CK627_RS19735	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS19760	SM00919	Malic enzyme, NAD binding domain
CK627_RS19760	SM01274	CK627_RS19760
CK627_RS19765	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS19780	SM00267	diguanylate cyclase
CK627_RS19830	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19845	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS19860	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19900	SM00387	Histidine kinase-like ATPases
CK627_RS19900	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS19905	SM00448	cheY-homologous receiver domain
CK627_RS19905	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS19925	SM00382	ATPases associated with a variety of cellular activities
CK627_RS19935	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS19945	SM00448	cheY-homologous receiver domain
CK627_RS19950	SM00387	Histidine kinase-like ATPases
CK627_RS19955	SM00919	Malic enzyme, NAD binding domain
CK627_RS19955	SM01274	CK627_RS19955
CK627_RS19970	SM00347	helix_turn_helix multiple antibiotic resistance protein
CK627_RS19985	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS20020	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CK627_RS20020	SM00292	breast cancer carboxy-terminal domain
CK627_RS20020	SM00532	Ligase N family
CK627_RS20025	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CK627_RS20060	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS20085	SM00642	Alpha-amylase domain
CK627_RS20095	SM00421	helix_turn_helix, Lux Regulon
CK627_RS20095	SM00448	cheY-homologous receiver domain
CK627_RS20120	SM00267	diguanylate cyclase
CK627_RS20125	SM00977	TilS substrate C-terminal domain
CK627_RS20140	SM00382	ATPases associated with a variety of cellular activities
CK627_RS20185	SM00862	Transcriptional regulatory protein, C terminal
CK627_RS20195	SM00481	DNA polymerase alpha chain like domain
CK627_RS20225	SM00935	Outer membrane protein (OmpH-like)
CK627_RS20235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CK627_RS20280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS20360	SM00028	Tetratricopeptide repeats
CK627_RS20365	SM00267	diguanylate cyclase
CK627_RS20375	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CK627_RS20375	SM00475	5'-3' exonuclease
CK627_RS20380	SM01329	CK627_RS20380
CK627_RS20410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS20410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS20450	SM00900	CK627_RS20450
CK627_RS20565	SM00421	helix_turn_helix, Lux Regulon
CK627_RS20660	SM00422	helix_turn_helix, mercury resistance
CK627_RS20695	SM00830	Chorismate mutase type II
CK627_RS20720	SM00420	helix_turn_helix, Deoxyribose operon repressor
CK627_RS20720	SM01134	CK627_RS20720
CK627_RS20735	SM01007	Class II Aldolase and Adducin N-terminal domain
CK627_RS20760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS20760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS20790	SM00463	Small MutS-related domain
CK627_RS20800	SM00857	Resolvase, N terminal domain
CK627_RS20910	SM00507	HNH nucleases
CK627_RS21005	SM00342	helix_turn_helix, arabinose operon control protein
CK627_RS21005	SM00478	endonuclease III
CK627_RS21005	SM01009	AlkA N-terminal domain
CK627_RS21045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS21050	SM00448	cheY-homologous receiver domain
CK627_RS21060	SM00073	Histidine Phosphotransfer domain
CK627_RS21060	SM00260	Two component signalling adaptor domain
CK627_RS21060	SM00387	Histidine kinase-like ATPases
CK627_RS21060	SM01231	CK627_RS21060
CK627_RS21065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS21065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS21070	SM00260	Two component signalling adaptor domain
CK627_RS21075	SM00091	PAS domain
CK627_RS21075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS21075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS21080	SM00138	Methyltransferase, chemotaxis proteins 
CK627_RS21090	SM00448	cheY-homologous receiver domain
CK627_RS21120	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS21120	SM00387	Histidine kinase-like ATPases
CK627_RS21120	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS21120	SM00448	cheY-homologous receiver domain
CK627_RS21125	SM00421	helix_turn_helix, Lux Regulon
CK627_RS21125	SM00448	cheY-homologous receiver domain
CK627_RS21150	SM00052	Putative diguanylate phosphodiesterase
CK627_RS21165	SM01005	Alanine racemase, C-terminal domain
CK627_RS21170	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21180	SM00978	CK627_RS21180
CK627_RS21185	SM00052	Putative diguanylate phosphodiesterase
CK627_RS21210	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21210	SM00448	cheY-homologous receiver domain
CK627_RS21220	SM00320	WD40 repeats
CK627_RS21245	SM00260	Two component signalling adaptor domain
CK627_RS21245	SM00448	cheY-homologous receiver domain
CK627_RS21260	SM00984	UDP binding domain
CK627_RS21320	SM00100	Cyclic nucleotide-monophosphate binding domain
CK627_RS21320	SM00419	helix_turn_helix, cAMP Regulatory protein
CK627_RS21330	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CK627_RS21330	SM00495	Chitin-binding domain type 3
CK627_RS21340	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CK627_RS21340	SM00495	Chitin-binding domain type 3
CK627_RS21340	SM00636	CK627_RS21340
CK627_RS21345	SM00387	Histidine kinase-like ATPases
CK627_RS21345	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS21345	SM00448	cheY-homologous receiver domain
CK627_RS21355	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS21415	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21460	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21475	SM00271	DnaJ molecular chaperone homology domain
CK627_RS21505	SM00650	Ribosomal RNA adenine dimethylases
CK627_RS21520	SM00530	Helix-turn-helix XRE-family like proteins 
CK627_RS21530	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS21580	SM00244	prohibitin homologues
CK627_RS21585	SM00244	prohibitin homologues
CK627_RS21605	SM00853	MutL C terminal dimerisation domain
CK627_RS21605	SM01340	CK627_RS21605
CK627_RS21610	SM00257	Lysin motif
CK627_RS21610	SM00646	CK627_RS21610
CK627_RS21645	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21645	SM00930	CK627_RS21645
CK627_RS21660	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CK627_RS21665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS21665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CK627_RS21670	SM00052	Putative diguanylate phosphodiesterase
CK627_RS21670	SM00448	cheY-homologous receiver domain
CK627_RS21675	SM00062	Bacterial periplasmic substrate-binding proteins
CK627_RS21675	SM00073	Histidine Phosphotransfer domain
CK627_RS21675	SM00091	PAS domain
CK627_RS21675	SM00387	Histidine kinase-like ATPases
CK627_RS21675	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS21675	SM00448	cheY-homologous receiver domain
CK627_RS21685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS21690	SM00073	Histidine Phosphotransfer domain
CK627_RS21690	SM00091	PAS domain
CK627_RS21690	SM00387	Histidine kinase-like ATPases
CK627_RS21690	SM00388	His Kinase A (phosphoacceptor) domain
CK627_RS21690	SM00448	cheY-homologous receiver domain
CK627_RS21735	SM01130	CK627_RS21735
CK627_RS21790	SM00014	Acid phosphatase homologues
CK627_RS21800	SM00917	LeuA allosteric (dimerisation) domain
CK627_RS21805	SM01329	CK627_RS21805
CK627_RS21840	SM00382	ATPases associated with a variety of cellular activities
CK627_RS21845	SM00670	Large family of predicted nucleotide-binding domains
CK627_RS21890	SM00487	DEAD-like helicases superfamily
CK627_RS21890	SM00490	helicase superfamily c-terminal domain
CK627_RS21900	SM00327	von Willebrand factor (vWF) type A domain
CK627_RS21900	SM00564	beta-propeller repeat
CK627_RS21935	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CK627_RS21950	SM00448	cheY-homologous receiver domain
CK627_RS21960	SM00382	ATPases associated with a variety of cellular activities
CK627_RS22055	SM00014	Acid phosphatase homologues
CK627_RS22065	SM00448	cheY-homologous receiver domain
CK627_RS22065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CK627_RS22095	SM00487	DEAD-like helicases superfamily
CK627_RS22095	SM00490	helicase superfamily c-terminal domain
CK627_RS22095	SM00847	Helicase associated domain (HA2)  Add an annotation
CK627_RS22140	SM00450	Rhodanese Homology Domain
CK627_RS22170	SM00382	ATPases associated with a variety of cellular activities
CK627_RS22225	SM00382	ATPases associated with a variety of cellular activities
CK627_RS22245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CK627_RS22290	SM00244	prohibitin homologues
CK627_RS22300	SM00116	Domain in cystathionine beta-synthase and other proteins.
CK627_RS22305	SM00382	ATPases associated with a variety of cellular activities
CK627_RS22390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
