locus-tag class description MRP56_RS00005 PF00308 Bacterial dnaA protein MRP56_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix MRP56_RS00005 PF11638 DnaA N-terminal domain MRP56_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MRP56_RS00010 PF02767 DNA polymerase III beta subunit, central domain MRP56_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MRP56_RS00015 PF02463 RecF/RecN/SMC N terminal domain MRP56_RS00020 PF00204 DNA gyrase B MRP56_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus MRP56_RS00020 PF18053 DNA gyrase B subunit insert domain MRP56_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00020 PF01751 Toprim domain MRP56_RS00030 PF08279 HTH domain MRP56_RS00030 PF13280 WYL domain MRP56_RS00035 PF00011 Hsp20/alpha crystallin family MRP56_RS00040 PF00011 Hsp20/alpha crystallin family MRP56_RS00045 PF00155 Aminotransferase class I and II MRP56_RS00060 PF07690 Major Facilitator Superfamily MRP56_RS00065 PF00072 Response regulator receiver domain MRP56_RS00065 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS00070 PF13493 Domain of unknown function (DUF4118) MRP56_RS00070 PF13492 GAF domain MRP56_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00070 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS00070 PF02702 Osmosensitive K+ channel His kinase sensor domain MRP56_RS00075 PF02669 K+-transporting ATPase, c chain MRP56_RS00085 PF03814 Potassium-transporting ATPase A subunit MRP56_RS00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS00095 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00100 PF00873 AcrB/AcrD/AcrF family MRP56_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS00110 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS00145 PF07690 Major Facilitator Superfamily MRP56_RS00155 PF00672 HAMP domain MRP56_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00155 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS00160 PF02954 Bacterial regulatory protein, Fis family MRP56_RS00160 PF00072 Response regulator receiver domain MRP56_RS00160 PF14532 Sigma-54 interaction domain MRP56_RS00175 PF12146 Serine aminopeptidase, S33 MRP56_RS00180 PF12105 SpoU, rRNA methylase, C-terminal MRP56_RS00180 PF00588 SpoU rRNA Methylase family MRP56_RS00185 PF02824 TGS domain MRP56_RS00185 PF04607 Region found in RelA / SpoT proteins MRP56_RS00185 PF13291 ACT domain MRP56_RS00190 PF01192 RNA polymerase Rpb6 MRP56_RS00195 PF00625 Guanylate kinase MRP56_RS00200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MRP56_RS00215 PF00892 EamA-like transporter family MRP56_RS00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS00235 PF03466 LysR substrate binding domain MRP56_RS00240 PF00579 tRNA synthetases class I (W and Y) MRP56_RS00245 PF00582 Universal stress protein family MRP56_RS00250 PF07055 Enoyl reductase FAD binding domain MRP56_RS00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MRP56_RS00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region MRP56_RS00255 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS00260 PF00210 Ferritin-like domain MRP56_RS00270 PF07690 Major Facilitator Superfamily MRP56_RS00275 PF01810 LysE type translocator MRP56_RS00290 PF16967 E-set like domain MRP56_RS00290 PF15976 CS1-pili formation C-terminal MRP56_RS00295 PF18649 EcpB C-terminal domain MRP56_RS00300 PF16449 Fimbrillin MatB MRP56_RS00305 PF00072 Response regulator receiver domain MRP56_RS00305 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00310 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS00310 PF01627 Hpt domain MRP56_RS00310 PF00989 PAS fold MRP56_RS00310 PF00072 Response regulator receiver domain MRP56_RS00310 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS00320 PF06580 Histidine kinase MRP56_RS00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00320 PF07694 5TMR of 5TMR-LYT MRP56_RS00325 PF00072 Response regulator receiver domain MRP56_RS00325 PF04397 LytTr DNA-binding domain MRP56_RS00330 PF07690 Major Facilitator Superfamily MRP56_RS00335 PF02222 ATP-grasp domain MRP56_RS00335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MRP56_RS00340 PF00731 AIR carboxylase MRP56_RS00355 PF03466 LysR substrate binding domain MRP56_RS00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS00360 PF00593 TonB dependent receptor MRP56_RS00360 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS00365 PF01177 Asp/Glu/Hydantoin racemase MRP56_RS00400 PF00899 ThiF family MRP56_RS00405 PF02657 Fe-S metabolism associated domain MRP56_RS00410 PF00266 Aminotransferase class-V MRP56_RS00415 PF00580 UvrD/REP helicase N-terminal domain MRP56_RS00415 PF13361 UvrD-like helicase C-terminal domain MRP56_RS00420 PF00563 EAL domain MRP56_RS00420 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS00420 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS00425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MRP56_RS00430 PF00107 Zinc-binding dehydrogenase MRP56_RS00430 PF08240 Alcohol dehydrogenase GroES-like domain MRP56_RS00435 PF00155 Aminotransferase class I and II MRP56_RS00440 PF08360 QacR-like protein, C-terminal region MRP56_RS00440 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS00445 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS00460 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) MRP56_RS00480 PF08340 Domain of unknown function (DUF1732) MRP56_RS00480 PF03755 YicC-like family, N-terminal region MRP56_RS00485 PF03725 3' exoribonuclease family, domain 2 MRP56_RS00485 PF01138 3' exoribonuclease family, domain 1 MRP56_RS00490 PF00156 Phosphoribosyl transferase domain MRP56_RS00495 PF00403 Heavy-metal-associated domain MRP56_RS00500 PF09278 MerR, DNA binding MRP56_RS00500 PF00376 MerR family regulatory protein MRP56_RS00505 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS00505 PF00360 Phytochrome region MRP56_RS00505 PF00563 EAL domain MRP56_RS00505 PF01590 GAF domain MRP56_RS00510 PF06288 Protein of unknown function (DUF1040) MRP56_RS00515 PF13746 4Fe-4S dicluster domain MRP56_RS00515 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MRP56_RS00515 PF12801 4Fe-4S binding domain MRP56_RS00520 PF01636 Phosphotransferase enzyme family MRP56_RS00525 PF01323 DSBA-like thioredoxin domain MRP56_RS00530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MRP56_RS00530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MRP56_RS00535 PF00857 Isochorismatase family MRP56_RS00545 PF04463 Protein of unknown function (DUF523) MRP56_RS00550 PF01553 Acyltransferase MRP56_RS00555 PF01553 Acyltransferase MRP56_RS00560 PF13335 Magnesium chelatase, subunit ChlI C-terminal MRP56_RS00560 PF01078 Magnesium chelatase, subunit ChlI MRP56_RS00565 PF00205 Thiamine pyrophosphate enzyme, central domain MRP56_RS00565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS00565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MRP56_RS00575 PF01063 Amino-transferase class IV MRP56_RS00580 PF00920 Dehydratase family MRP56_RS00585 PF00585 C-terminal regulatory domain of Threonine dehydratase MRP56_RS00585 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS00590 PF01389 OmpA-like transmembrane domain MRP56_RS00590 PF00691 OmpA family MRP56_RS00600 PF17764 3′ DNA-binding domain (3′BD) MRP56_RS00600 PF18074 Primosomal protein N C-terminal domain MRP56_RS00600 PF00271 Helicase conserved C-terminal domain MRP56_RS00600 PF00270 DEAD/DEAH box helicase MRP56_RS00600 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MRP56_RS00605 PF01197 Ribosomal protein L31 MRP56_RS00610 PF13460 NAD(P)H-binding MRP56_RS00610 PF11066 Protein of unknown function (DUF2867) MRP56_RS00615 PF03949 Malic enzyme, NAD binding domain MRP56_RS00615 PF00390 Malic enzyme, N-terminal domain MRP56_RS00625 PF00672 HAMP domain MRP56_RS00625 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS00630 PF00072 Response regulator receiver domain MRP56_RS00630 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS00635 PF05958 tRNA (Uracil-5-)-methyltransferase MRP56_RS00650 PF02903 Alpha amylase, N-terminal ig-like domain MRP56_RS00650 PF00128 Alpha amylase, catalytic domain MRP56_RS00665 PF00012 Hsp70 protein MRP56_RS00670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS00670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MRP56_RS00675 PF05981 CreA protein MRP56_RS00690 PF01258 Prokaryotic dksA/traR C4-type zinc finger MRP56_RS00695 PF00120 Glutamine synthetase, catalytic domain MRP56_RS00700 PF00202 Aminotransferase class-III MRP56_RS00705 PF13416 Bacterial extracellular solute-binding protein MRP56_RS00710 PF13416 Bacterial extracellular solute-binding protein MRP56_RS00715 PF08402 TOBE domain MRP56_RS00715 PF00005 ABC transporter MRP56_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS00725 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS00730 PF03475 3-alpha domain MRP56_RS00730 PF03473 MOSC domain MRP56_RS00745 PF03061 Thioesterase superfamily MRP56_RS00750 PF00270 DEAD/DEAH box helicase MRP56_RS00750 PF00271 Helicase conserved C-terminal domain MRP56_RS00750 PF00570 HRDC domain MRP56_RS00750 PF16124 RecQ zinc-binding MRP56_RS00750 PF09382 RQC domain MRP56_RS00755 PF00034 Cytochrome c MRP56_RS00760 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MRP56_RS00770 PF02592 Putative vitamin uptake transporter MRP56_RS00775 PF03737 Aldolase/RraA MRP56_RS00780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS00780 PF00672 HAMP domain MRP56_RS00785 PF00571 CBS domain MRP56_RS00785 PF01769 Divalent cation transporter MRP56_RS00785 PF03448 MgtE intracellular N domain MRP56_RS00790 PF10414 Sirohaem synthase dimerisation region MRP56_RS00790 PF14824 Sirohaem biosynthesis protein central MRP56_RS00790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MRP56_RS00795 PF01226 Formate/nitrite transporter MRP56_RS00800 PF13806 Rieske-like [2Fe-2S] domain MRP56_RS00810 PF18267 Rubredoxin NAD+ reductase C-terminal domain MRP56_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS00810 PF04324 BFD-like [2Fe-2S] binding domain MRP56_RS00810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MRP56_RS00810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MRP56_RS00825 PF00005 ABC transporter MRP56_RS00830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS00845 PF07690 Major Facilitator Superfamily MRP56_RS00850 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS00850 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS00850 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS00855 PF00227 Proteasome subunit MRP56_RS00865 PF05746 DALR anticodon binding domain MRP56_RS00865 PF00750 tRNA synthetases class I (R) MRP56_RS00865 PF03485 Arginyl tRNA synthetase N terminal domain MRP56_RS00875 PF04542 Sigma-70 region 2 MRP56_RS00875 PF04545 Sigma-70, region 4 MRP56_RS00880 PF12973 ChrR Cupin-like domain MRP56_RS00885 PF02673 Bacitracin resistance protein BacA MRP56_RS00890 PF00248 Aldo/keto reductase family MRP56_RS00895 PF01263 Aldose 1-epimerase MRP56_RS00900 PF00288 GHMP kinases N terminal domain MRP56_RS00900 PF08544 GHMP kinases C terminal MRP56_RS00900 PF10509 Galactokinase galactose-binding signature MRP56_RS00905 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MRP56_RS00905 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MRP56_RS00910 PF16363 GDP-mannose 4,6 dehydratase MRP56_RS00915 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS00920 PF16353 Domain of unknown function(DUF4981) MRP56_RS00920 PF00703 Glycosyl hydrolases family 2 MRP56_RS00920 PF02837 Glycosyl hydrolases family 2, sugar binding domain MRP56_RS00920 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MRP56_RS00920 PF02929 Beta galactosidase small chain MRP56_RS00925 PF13407 Periplasmic binding protein domain MRP56_RS00930 PF00005 ABC transporter MRP56_RS00935 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS00940 PF02743 Cache domain MRP56_RS00940 PF00672 HAMP domain MRP56_RS00965 PF00696 Amino acid kinase family MRP56_RS00970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MRP56_RS00970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MRP56_RS00975 PF03606 C4-dicarboxylate anaerobic carrier MRP56_RS00980 PF02863 Arginine repressor, C-terminal domain MRP56_RS00980 PF01316 Arginine repressor, DNA binding domain MRP56_RS00985 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MRP56_RS00985 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MRP56_RS00990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MRP56_RS00990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MRP56_RS01010 PF02666 Phosphatidylserine decarboxylase MRP56_RS01015 PF00672 HAMP domain MRP56_RS01015 PF02743 Cache domain MRP56_RS01015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS01020 PF08212 Lipocalin-like domain MRP56_RS01025 PF06719 AraC-type transcriptional regulator N-terminus MRP56_RS01025 PF12833 Helix-turn-helix domain MRP56_RS01030 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS01035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MRP56_RS01035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MRP56_RS01035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MRP56_RS01040 PF02233 NAD(P) transhydrogenase beta subunit MRP56_RS01050 PF03313 Serine dehydratase alpha chain MRP56_RS01055 PF00375 Sodium:dicarboxylate symporter family MRP56_RS01060 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS01060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS01065 PF13525 Outer membrane lipoprotein MRP56_RS01070 PF00849 RNA pseudouridylate synthase MRP56_RS01070 PF01479 S4 domain MRP56_RS01075 PF02578 Multi-copper polyphenol oxidoreductase laccase MRP56_RS01080 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS01080 PF17871 AAA lid domain MRP56_RS01080 PF02861 Clp amino terminal domain, pathogenicity island component MRP56_RS01080 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS01080 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS01090 PF03590 Aspartate-ammonia ligase MRP56_RS01095 PF01037 Lrp/AsnC ligand binding domain MRP56_RS01105 PF10063 Uncharacterized integral membrane protein (DUF2301) MRP56_RS01110 PF00478 IMP dehydrogenase / GMP reductase domain MRP56_RS01110 PF00571 CBS domain MRP56_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS01130 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS01140 PF00158 Sigma-54 interaction domain MRP56_RS01140 PF00072 Response regulator receiver domain MRP56_RS01145 PF06496 Protein of unknown function (DUF1097) MRP56_RS01150 PF00174 Oxidoreductase molybdopterin binding domain MRP56_RS01155 PF01794 Ferric reductase like transmembrane component MRP56_RS01170 PF00072 Response regulator receiver domain MRP56_RS01170 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS01185 PF00384 Molybdopterin oxidoreductase MRP56_RS01185 PF18364 Molybdopterin oxidoreductase N-terminal domain MRP56_RS01185 PF01568 Molydopterin dinucleotide binding domain MRP56_RS01190 PF03264 NapC/NirT cytochrome c family, N-terminal region MRP56_RS01195 PF01131 DNA topoisomerase MRP56_RS01195 PF01751 Toprim domain MRP56_RS01210 PF12852 Cupin MRP56_RS01210 PF12833 Helix-turn-helix domain MRP56_RS01215 PF02386 Cation transport protein MRP56_RS01220 PF02080 TrkA-C domain MRP56_RS01220 PF02254 TrkA-N domain MRP56_RS01225 PF01565 FAD binding domain MRP56_RS01225 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MRP56_RS01230 PF02237 Biotin protein ligase C terminal domain MRP56_RS01230 PF03099 Biotin/lipoate A/B protein ligase family MRP56_RS01230 PF08279 HTH domain MRP56_RS01235 PF00485 Phosphoribulokinase / Uridine kinase family MRP56_RS01250 PF03143 Elongation factor Tu C-terminal domain MRP56_RS01250 PF03144 Elongation factor Tu domain 2 MRP56_RS01250 PF00009 Elongation factor Tu GTP binding domain MRP56_RS01260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MRP56_RS01265 PF00467 KOW motif MRP56_RS01265 PF02357 Transcription termination factor nusG MRP56_RS01270 PF00298 Ribosomal protein L11, RNA binding domain MRP56_RS01270 PF03946 Ribosomal protein L11, N-terminal domain MRP56_RS01275 PF00687 Ribosomal protein L1p/L10e family MRP56_RS01280 PF00466 Ribosomal protein L10 MRP56_RS01285 PF16320 Ribosomal protein L7/L12 dimerisation domain MRP56_RS01285 PF00542 Ribosomal protein L7/L12 C-terminal domain MRP56_RS01290 PF04563 RNA polymerase beta subunit MRP56_RS01290 PF04561 RNA polymerase Rpb2, domain 2 MRP56_RS01290 PF04560 RNA polymerase Rpb2, domain 7 MRP56_RS01290 PF00562 RNA polymerase Rpb2, domain 6 MRP56_RS01290 PF10385 RNA polymerase beta subunit external 1 domain MRP56_RS01290 PF04565 RNA polymerase Rpb2, domain 3 MRP56_RS01295 PF04997 RNA polymerase Rpb1, domain 1 MRP56_RS01295 PF04998 RNA polymerase Rpb1, domain 5 MRP56_RS01295 PF00623 RNA polymerase Rpb1, domain 2 MRP56_RS01295 PF04983 RNA polymerase Rpb1, domain 3 MRP56_RS01295 PF05000 RNA polymerase Rpb1, domain 4 MRP56_RS01300 PF13309 HTH domain MRP56_RS01300 PF08348 YheO-like PAS domain MRP56_RS01305 PF01042 Endoribonuclease L-PSP MRP56_RS01310 PF02635 DsrE/DsrF-like family MRP56_RS01315 PF02635 DsrE/DsrF-like family MRP56_RS01320 PF04077 DsrH like protein MRP56_RS01325 PF00164 Ribosomal protein S12/S23 MRP56_RS01330 PF00177 Ribosomal protein S7p/S5e MRP56_RS01335 PF00009 Elongation factor Tu GTP binding domain MRP56_RS01335 PF03144 Elongation factor Tu domain 2 MRP56_RS01335 PF00679 Elongation factor G C-terminus MRP56_RS01335 PF14492 Elongation Factor G, domain II MRP56_RS01335 PF03764 Elongation factor G, domain IV MRP56_RS01340 PF03143 Elongation factor Tu C-terminal domain MRP56_RS01340 PF00009 Elongation factor Tu GTP binding domain MRP56_RS01340 PF03144 Elongation factor Tu domain 2 MRP56_RS01380 PF00860 Permease family MRP56_RS01385 PF02733 Dak1 domain MRP56_RS01390 PF02734 DAK2 domain MRP56_RS01395 PF03610 PTS system fructose IIA component MRP56_RS01395 PF00381 PTS HPr component phosphorylation site MRP56_RS01395 PF05524 PEP-utilising enzyme, N-terminal MRP56_RS01395 PF00391 PEP-utilising enzyme, mobile domain MRP56_RS01400 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS01405 PF02954 Bacterial regulatory protein, Fis family MRP56_RS01405 PF00989 PAS fold MRP56_RS01405 PF00158 Sigma-54 interaction domain MRP56_RS01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS01410 PF03466 LysR substrate binding domain MRP56_RS01415 PF04371 Porphyromonas-type peptidyl-arginine deiminase MRP56_RS01430 PF01594 AI-2E family transporter MRP56_RS01435 PF00293 NUDIX domain MRP56_RS01460 PF00199 Catalase MRP56_RS01460 PF06628 Catalase-related immune-responsive MRP56_RS01465 PF00583 Acetyltransferase (GNAT) family MRP56_RS01485 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS01495 PF00005 ABC transporter MRP56_RS01495 PF12857 TOBE-like domain MRP56_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS01520 PF07702 UTRA domain MRP56_RS01520 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS01530 PF03466 LysR substrate binding domain MRP56_RS01540 PF02678 Pirin MRP56_RS01540 PF17954 Quercetinase C-terminal cupin domain MRP56_RS01545 PF07681 DoxX MRP56_RS01550 PF17946 RecC C-terminal domain MRP56_RS01555 PF13361 UvrD-like helicase C-terminal domain MRP56_RS01555 PF00580 UvrD/REP helicase N-terminal domain MRP56_RS01555 PF12705 PD-(D/E)XK nuclease superfamily MRP56_RS01560 PF13538 UvrD-like helicase C-terminal domain MRP56_RS01570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS01580 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS01605 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS01605 PF00072 Response regulator receiver domain MRP56_RS01610 PF00672 HAMP domain MRP56_RS01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS01610 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS01615 PF00563 EAL domain MRP56_RS01615 PF01590 GAF domain MRP56_RS01615 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS01615 PF00360 Phytochrome region MRP56_RS01620 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS01620 PF00593 TonB dependent receptor MRP56_RS01625 PF00313 'Cold-shock' DNA-binding domain MRP56_RS01635 PF01545 Cation efflux family MRP56_RS01635 PF16916 Dimerisation domain of Zinc Transporter MRP56_RS01645 PF00436 Single-strand binding protein family MRP56_RS01650 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS01655 PF17760 UvrA interaction domain MRP56_RS01655 PF00005 ABC transporter MRP56_RS01655 PF17755 UvrA DNA-binding domain MRP56_RS01660 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS01665 PF03922 OmpW family MRP56_RS01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS01670 PF00672 HAMP domain MRP56_RS01685 PF02219 Methylenetetrahydrofolate reductase MRP56_RS01695 PF03594 Benzoate membrane transport protein MRP56_RS01700 PF07883 Cupin domain MRP56_RS01700 PF01381 Helix-turn-helix MRP56_RS01730 PF04363 Protein of unknown function (DUF496) MRP56_RS01740 PF04751 Protein of unknown function (DUF615) MRP56_RS01745 PF01523 Putative modulator of DNA gyrase MRP56_RS01750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MRP56_RS01755 PF01722 BolA-like protein MRP56_RS01765 PF05494 MlaC protein MRP56_RS01770 PF02470 MlaD protein MRP56_RS01775 PF02405 Permease MlaE MRP56_RS01780 PF00005 ABC transporter MRP56_RS01785 PF00571 CBS domain MRP56_RS01785 PF01380 SIS domain MRP56_RS01795 PF06835 Lipopolysaccharide-assembly, LptC-related MRP56_RS01800 PF03968 OstA-like protein MRP56_RS01805 PF00005 ABC transporter MRP56_RS01805 PF12399 Branched-chain amino acid ATP-binding cassette transporter MRP56_RS01810 PF04552 Sigma-54, DNA binding domain MRP56_RS01810 PF04963 Sigma-54 factor, core binding domain MRP56_RS01810 PF00309 Sigma-54 factor, Activator interacting domain (AID) MRP56_RS01815 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MRP56_RS01820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS01825 PF03668 P-loop ATPase protein family MRP56_RS01830 PF00381 PTS HPr component phosphorylation site MRP56_RS01835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS01835 PF08279 HTH domain MRP56_RS01835 PF05043 Mga helix-turn-helix domain MRP56_RS01835 PF00874 PRD domain MRP56_RS01840 PF07071 KDGP aldolase MRP56_RS01845 PF03841 L-seryl-tRNA selenium transferase MRP56_RS01850 PF01979 Amidohydrolase family MRP56_RS01880 PF13180 PDZ domain MRP56_RS01885 PF00595 PDZ domain MRP56_RS01885 PF13180 PDZ domain MRP56_RS01895 PF03969 AFG1-like ATPase MRP56_RS01900 PF00572 Ribosomal protein L13 MRP56_RS01905 PF00380 Ribosomal protein S9/S16 MRP56_RS01910 PF00355 Rieske [2Fe-2S] domain MRP56_RS01910 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MRP56_RS01915 PF00032 Cytochrome b(C-terminal)/b6/petD MRP56_RS01915 PF00033 Cytochrome b/b6/petB MRP56_RS01920 PF02167 Cytochrome C1 family MRP56_RS01925 PF00043 Glutathione S-transferase, C-terminal domain MRP56_RS01925 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS01930 PF04386 Stringent starvation protein B MRP56_RS01935 PF04972 BON domain MRP56_RS01940 PF13580 SIS domain MRP56_RS01945 PF02021 Uncharacterised protein family UPF0102 MRP56_RS01950 PF04348 LppC putative lipoprotein MRP56_RS01955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MRP56_RS01965 PF02381 MraZ protein, putative antitoxin-like MRP56_RS01970 PF01795 MraW methylase family MRP56_RS01975 PF04999 Cell division protein FtsL MRP56_RS01980 PF03717 Penicillin-binding Protein dimerisation domain MRP56_RS01980 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS01985 PF01225 Mur ligase family, catalytic domain MRP56_RS01985 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS01985 PF08245 Mur ligase middle domain MRP56_RS01990 PF08245 Mur ligase middle domain MRP56_RS01990 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS01990 PF01225 Mur ligase family, catalytic domain MRP56_RS01995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MRP56_RS01995 PF00953 Glycosyl transferase family 4 MRP56_RS02000 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS02000 PF08245 Mur ligase middle domain MRP56_RS02005 PF01098 Cell cycle protein MRP56_RS02010 PF04101 Glycosyltransferase family 28 C-terminal domain MRP56_RS02010 PF03033 Glycosyltransferase family 28 N-terminal domain MRP56_RS02015 PF08245 Mur ligase middle domain MRP56_RS02015 PF01225 Mur ligase family, catalytic domain MRP56_RS02015 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS02020 PF08478 POTRA domain, FtsQ-type MRP56_RS02020 PF03799 Cell division protein FtsQ MRP56_RS02025 PF02491 SHS2 domain inserted in FTSA MRP56_RS02030 PF12327 FtsZ family, C-terminal domain MRP56_RS02030 PF00091 Tubulin/FtsZ family, GTPase domain MRP56_RS02035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MRP56_RS02045 PF07516 SecA Wing and Scaffold domain MRP56_RS02045 PF02810 SEC-C motif MRP56_RS02045 PF07517 SecA DEAD-like domain MRP56_RS02045 PF01043 SecA preprotein cross-linking domain MRP56_RS02055 PF00293 NUDIX domain MRP56_RS02060 PF03884 DNA gyrase inhibitor YacG MRP56_RS02065 PF07072 Cell division protein MRP56_RS02070 PF01121 Dephospho-CoA kinase MRP56_RS02075 PF06750 Bacterial Peptidase A24 N-terminal domain MRP56_RS02075 PF01478 Type IV leader peptidase family MRP56_RS02080 PF00482 Type II secretion system (T2SS), protein F MRP56_RS02085 PF00437 Type II/IV secretion system protein MRP56_RS02085 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MRP56_RS02090 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS02095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MRP56_RS02095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MRP56_RS02105 PF01510 N-acetylmuramoyl-L-alanine amidase MRP56_RS02110 PF07729 FCD domain MRP56_RS02110 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS02115 PF17831 Pyruvate dehydrogenase E1 component middle domain MRP56_RS02115 PF00456 Transketolase, thiamine diphosphate binding domain MRP56_RS02120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MRP56_RS02120 PF00364 Biotin-requiring enzyme MRP56_RS02120 PF02817 e3 binding domain MRP56_RS02125 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS02125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS02135 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS02135 PF00672 HAMP domain MRP56_RS02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS02140 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS02140 PF00672 HAMP domain MRP56_RS02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS02145 PF01734 Patatin-like phospholipase MRP56_RS02150 PF00330 Aconitase family (aconitate hydratase) MRP56_RS02150 PF06434 Aconitate hydratase 2 N-terminus MRP56_RS02150 PF11791 Aconitate B N-terminal domain MRP56_RS02155 PF12792 CSS motif domain associated with EAL MRP56_RS02155 PF00563 EAL domain MRP56_RS02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS02160 PF03466 LysR substrate binding domain MRP56_RS02165 PF01810 LysE type translocator MRP56_RS02170 PF04030 D-arabinono-1,4-lactone oxidase MRP56_RS02170 PF01565 FAD binding domain MRP56_RS02175 PF07683 Cobalamin synthesis protein cobW C-terminal domain MRP56_RS02175 PF02492 CobW/HypB/UreG, nucleotide-binding domain MRP56_RS02180 PF07690 Major Facilitator Superfamily MRP56_RS02190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MRP56_RS02195 PF02152 Dihydroneopterin aldolase MRP56_RS02200 PF02660 Glycerol-3-phosphate acyltransferase MRP56_RS02245 PF01584 CheW-like domain MRP56_RS02245 PF00072 Response regulator receiver domain MRP56_RS02255 PF08351 Domain of unknown function (DUF1726) MRP56_RS02255 PF13718 GNAT acetyltransferase 2 MRP56_RS02255 PF05127 Helicase MRP56_RS02255 PF17176 tRNA-binding domain MRP56_RS02270 PF00210 Ferritin-like domain MRP56_RS02280 PF02142 MGS-like domain MRP56_RS02295 PF00710 Asparaginase, N-terminal MRP56_RS02295 PF17763 Glutaminase/Asparaginase C-terminal domain MRP56_RS02310 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS02315 PF02378 Phosphotransferase system, EIIC MRP56_RS02315 PF00367 phosphotransferase system, EIIB MRP56_RS02320 PF11941 Domain of unknown function (DUF3459) MRP56_RS02320 PF00128 Alpha amylase, catalytic domain MRP56_RS02325 PF12464 Maltose acetyltransferase MRP56_RS02325 PF14602 Hexapeptide repeat of succinyl-transferase MRP56_RS02330 PF01037 Lrp/AsnC ligand binding domain MRP56_RS02335 PF00892 EamA-like transporter family MRP56_RS02345 PF00171 Aldehyde dehydrogenase family MRP56_RS02350 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS02360 PF00005 ABC transporter MRP56_RS02360 PF08402 TOBE domain MRP56_RS02365 PF13416 Bacterial extracellular solute-binding protein MRP56_RS02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS02370 PF03466 LysR substrate binding domain MRP56_RS02375 PF03553 Na+/H+ antiporter family MRP56_RS02415 PF08323 Starch synthase catalytic domain MRP56_RS02415 PF00534 Glycosyl transferases group 1 MRP56_RS02420 PF00483 Nucleotidyl transferase MRP56_RS02425 PF05175 Methyltransferase small domain MRP56_RS02425 PF08468 Methyltransferase small domain N-terminal MRP56_RS02430 PF00701 Dihydrodipicolinate synthetase family MRP56_RS02435 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS02435 PF01590 GAF domain MRP56_RS02435 PF00563 EAL domain MRP56_RS02435 PF00360 Phytochrome region MRP56_RS02445 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS02450 PF17209 Hfq protein MRP56_RS02455 PF04403 Paraquat-inducible protein A MRP56_RS02460 PF02470 MlaD protein MRP56_RS02465 PF03886 ABC-type transport auxiliary lipoprotein component MRP56_RS02470 PF00691 OmpA family MRP56_RS02470 PF01389 OmpA-like transmembrane domain MRP56_RS02480 PF00657 GDSL-like Lipase/Acylhydrolase MRP56_RS02485 PF04076 Bacterial OB fold (BOF) protein MRP56_RS02490 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MRP56_RS02490 PF01464 Transglycosylase SLT domain MRP56_RS02495 PF04362 Bacterial Fe(2+) trafficking MRP56_RS02500 PF14815 NUDIX domain MRP56_RS02500 PF10576 Iron-sulfur binding domain of endonuclease III MRP56_RS02500 PF00633 Helix-hairpin-helix motif MRP56_RS02500 PF00730 HhH-GPD superfamily base excision DNA repair protein MRP56_RS02505 PF16537 Type II secretion system protein B MRP56_RS02510 PF13401 AAA domain MRP56_RS02510 PF01471 Putative peptidoglycan binding domain MRP56_RS02515 PF01966 HD domain MRP56_RS02515 PF01743 Poly A polymerase head domain MRP56_RS02515 PF12627 Probable RNA and SrmB- binding site of polymerase A MRP56_RS02530 PF04172 LrgB-like family MRP56_RS02535 PF03788 LrgA family MRP56_RS02540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS02540 PF03466 LysR substrate binding domain MRP56_RS02545 PF00155 Aminotransferase class I and II MRP56_RS02545 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS02565 PF07350 Protein of unknown function (DUF1479) MRP56_RS02570 PF04073 Aminoacyl-tRNA editing domain MRP56_RS02575 PF01384 Phosphate transporter family MRP56_RS02580 PF01865 Protein of unknown function DUF47 MRP56_RS02595 PF03279 Bacterial lipid A biosynthesis acyltransferase MRP56_RS02600 PF00294 pfkB family carbohydrate kinase MRP56_RS02600 PF01467 Cytidylyltransferase-like MRP56_RS02605 PF02321 Outer membrane efflux protein MRP56_RS02610 PF00293 NUDIX domain MRP56_RS02615 PF06853 Protein of unknown function (DUF1249) MRP56_RS02620 PF00149 Calcineurin-like phosphoesterase MRP56_RS02625 PF05728 Uncharacterised protein family (UPF0227) MRP56_RS02630 PF00293 NUDIX domain MRP56_RS02640 PF07869 Protein of unknown function (DUF1656) MRP56_RS02645 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS02645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS02650 PF04632 Fusaric acid resistance protein family MRP56_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS02655 PF01751 Toprim domain MRP56_RS02655 PF00204 DNA gyrase B MRP56_RS02655 PF00986 DNA gyrase B subunit, carboxyl terminus MRP56_RS02660 PF03989 DNA gyrase C-terminal domain, beta-propeller MRP56_RS02660 PF00521 DNA gyrase/topoisomerase IV, subunit A MRP56_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS02675 PF03466 LysR substrate binding domain MRP56_RS02680 PF07690 Major Facilitator Superfamily MRP56_RS02715 PF00684 DnaJ central domain MRP56_RS02715 PF00226 DnaJ domain MRP56_RS02715 PF01556 DnaJ C terminal domain MRP56_RS02720 PF00578 AhpC/TSA family MRP56_RS02745 PF01553 Acyltransferase MRP56_RS02750 PF04012 PspA/IM30 family MRP56_RS02765 PF01541 GIY-YIG catalytic domain MRP56_RS02775 PF00892 EamA-like transporter family MRP56_RS02780 PF03167 Uracil DNA glycosylase superfamily MRP56_RS02785 PF00892 EamA-like transporter family MRP56_RS02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS02790 PF03466 LysR substrate binding domain MRP56_RS02795 PF00950 ABC 3 transport family MRP56_RS02800 PF00005 ABC transporter MRP56_RS02805 PF01297 Zinc-uptake complex component A periplasmic MRP56_RS02825 PF01476 LysM domain MRP56_RS02825 PF08525 Opacity-associated protein A N-terminal motif MRP56_RS02825 PF01551 Peptidase family M23 MRP56_RS02830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS02835 PF04222 Protein of unknown function (DUF416) MRP56_RS02850 PF02028 BCCT, betaine/carnitine/choline family transporter MRP56_RS02855 PF00488 MutS domain V MRP56_RS02855 PF05192 MutS domain III MRP56_RS02855 PF05190 MutS family domain IV MRP56_RS02855 PF01624 MutS domain I MRP56_RS02855 PF05188 MutS domain II MRP56_RS02860 PF02464 Competence-damaged protein MRP56_RS02865 PF00154 recA bacterial DNA recombination protein MRP56_RS02870 PF02631 RecX family MRP56_RS02875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MRP56_RS02875 PF02272 DHHA1 domain MRP56_RS02875 PF01411 tRNA synthetases class II (A) MRP56_RS02880 PF00696 Amino acid kinase family MRP56_RS02880 PF01842 ACT domain MRP56_RS02880 PF13840 ACT domain MRP56_RS02885 PF02599 Global regulator protein family MRP56_RS02925 PF00768 D-alanyl-D-alanine carboxypeptidase MRP56_RS02930 PF09335 SNARE associated Golgi protein MRP56_RS02935 PF00571 CBS domain MRP56_RS02935 PF01595 Cyclin M transmembrane N-terminal domain MRP56_RS02935 PF03471 Transporter associated domain MRP56_RS02940 PF08264 Anticodon-binding domain of tRNA MRP56_RS02940 PF00133 tRNA synthetases class I (I, L, M and V) MRP56_RS02940 PF10458 Valyl tRNA synthetase tRNA binding arm MRP56_RS02945 PF04364 DNA polymerase III chi subunit, HolC MRP56_RS02950 PF00883 Cytosol aminopeptidase family, catalytic domain MRP56_RS02950 PF02789 Cytosol aminopeptidase family, N-terminal domain MRP56_RS02955 PF03739 Lipopolysaccharide export system permease LptF/LptG MRP56_RS02960 PF03739 Lipopolysaccharide export system permease LptF/LptG MRP56_RS02975 PF13356 Arm DNA-binding domain MRP56_RS02975 PF00589 Phage integrase family MRP56_RS03005 PF17191 RecG wedge domain MRP56_RS03005 PF13749 Putative ATP-dependent DNA helicase recG C-terminal MRP56_RS03005 PF00270 DEAD/DEAH box helicase MRP56_RS03010 PF00909 Ammonium Transporter Family MRP56_RS03015 PF01938 TRAM domain MRP56_RS03015 PF05958 tRNA (Uracil-5-)-methyltransferase MRP56_RS03025 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS03030 PF01026 TatD related DNase MRP56_RS03035 PF07662 Na+ dependent nucleoside transporter C-terminus MRP56_RS03035 PF01773 Na+ dependent nucleoside transporter N-terminus MRP56_RS03035 PF07670 Nucleoside recognition MRP56_RS03045 PF01791 DeoC/LacD family aldolase MRP56_RS03050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MRP56_RS03050 PF02885 Glycosyl transferase family, helical bundle domain MRP56_RS03050 PF00591 Glycosyl transferase family, a/b domain MRP56_RS03055 PF01676 Metalloenzyme superfamily MRP56_RS03060 PF01048 Phosphorylase superfamily MRP56_RS03065 PF00563 EAL domain MRP56_RS03065 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS03065 PF05231 MASE1 MRP56_RS03065 PF08447 PAS fold MRP56_RS03065 PF08448 PAS fold MRP56_RS03065 PF13426 PAS domain MRP56_RS03075 PF18429 Domain of unknown function (DUF5609) MRP56_RS03090 PF18073 Rubredoxin metal binding domain MRP56_RS03095 PF07238 PilZ domain MRP56_RS03100 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MRP56_RS03110 PF00216 Bacterial DNA-binding protein MRP56_RS03125 PF01207 Dihydrouridine synthase (Dus) MRP56_RS03130 PF01475 Ferric uptake regulator family MRP56_RS03145 PF05525 Branched-chain amino acid transport protein MRP56_RS03150 PF05525 Branched-chain amino acid transport protein MRP56_RS03155 PF05175 Methyltransferase small domain MRP56_RS03160 PF00271 Helicase conserved C-terminal domain MRP56_RS03160 PF00270 DEAD/DEAH box helicase MRP56_RS03165 PF03883 Peroxide stress protein YaaA MRP56_RS03170 PF00437 Type II/IV secretion system protein MRP56_RS03175 PF00437 Type II/IV secretion system protein MRP56_RS03180 PF01168 Alanine racemase, N-terminal domain MRP56_RS03185 PF03807 NADP oxidoreductase coenzyme F420-dependent MRP56_RS03185 PF14748 Pyrroline-5-carboxylate reductase dimerisation MRP56_RS03190 PF02325 YGGT family MRP56_RS03195 PF02594 Uncharacterised ACR, YggU family COG1872 MRP56_RS03210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS03220 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS03225 PF10952 Protein of unknown function (DUF2753) MRP56_RS03230 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS03245 PF00106 short chain dehydrogenase MRP56_RS03250 PF04073 Aminoacyl-tRNA editing domain MRP56_RS03250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MRP56_RS03250 PF03129 Anticodon binding domain MRP56_RS03255 PF00672 HAMP domain MRP56_RS03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS03260 PF01330 RuvA N terminal domain MRP56_RS03260 PF07499 RuvA, C-terminal domain MRP56_RS03265 PF05496 Holliday junction DNA helicase RuvB P-loop domain MRP56_RS03265 PF17864 RuvB AAA lid domain MRP56_RS03265 PF05491 RuvB C-terminal winged helix domain MRP56_RS03270 PF01654 Cytochrome bd terminal oxidase subunit I MRP56_RS03275 PF02322 Cytochrome bd terminal oxidase subunit II MRP56_RS03280 PF08173 Membrane bound YbgT-like protein MRP56_RS03285 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MRP56_RS03290 PF03061 Thioesterase superfamily MRP56_RS03295 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS03300 PF02472 Biopolymer transport protein ExbD/TolR MRP56_RS03310 PF07676 WD40-like Beta Propeller Repeat MRP56_RS03310 PF04052 TolB amino-terminal domain MRP56_RS03315 PF00691 OmpA family MRP56_RS03320 PF13174 Tetratricopeptide repeat MRP56_RS03320 PF16331 TolA binding protein trimerisation MRP56_RS03395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS03395 PF00672 HAMP domain MRP56_RS03400 PF02445 Quinolinate synthetase A protein MRP56_RS03405 PF01263 Aldose 1-epimerase MRP56_RS03410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MRP56_RS03410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MRP56_RS03415 PF02446 4-alpha-glucanotransferase MRP56_RS03420 PF02806 Alpha amylase, C-terminal all-beta domain MRP56_RS03420 PF00128 Alpha amylase, catalytic domain MRP56_RS03420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MRP56_RS03425 PF00128 Alpha amylase, catalytic domain MRP56_RS03425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MRP56_RS03430 PF01641 SelR domain MRP56_RS03440 PF00293 NUDIX domain MRP56_RS03445 PF16884 N-terminal domain of oxidoreductase MRP56_RS03445 PF00107 Zinc-binding dehydrogenase MRP56_RS03450 PF02566 OsmC-like protein MRP56_RS03455 PF01047 MarR family MRP56_RS03470 PF01037 Lrp/AsnC ligand binding domain MRP56_RS03485 PF07690 Major Facilitator Superfamily MRP56_RS03505 PF00209 Sodium:neurotransmitter symporter family MRP56_RS03515 PF00209 Sodium:neurotransmitter symporter family MRP56_RS03540 PF00155 Aminotransferase class I and II MRP56_RS03540 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS03550 PF01810 LysE type translocator MRP56_RS03555 PF01177 Asp/Glu/Hydantoin racemase MRP56_RS03560 PF00394 Multicopper oxidase MRP56_RS03560 PF07732 Multicopper oxidase MRP56_RS03560 PF07731 Multicopper oxidase MRP56_RS03570 PF04074 YhcH/YjgK/YiaL MRP56_RS03575 PF00871 Acetokinase family MRP56_RS03580 PF00924 Mechanosensitive ion channel MRP56_RS03585 PF03734 L,D-transpeptidase catalytic domain MRP56_RS03585 PF17969 L,D-transpeptidase C-terminal domain MRP56_RS03590 PF00474 Sodium:solute symporter family MRP56_RS03620 PF02525 Flavodoxin-like fold MRP56_RS03625 PF03466 LysR substrate binding domain MRP56_RS03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS03630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MRP56_RS03640 PF12848 ABC transporter MRP56_RS03640 PF00005 ABC transporter MRP56_RS03645 PF01380 SIS domain MRP56_RS03645 PF00571 CBS domain MRP56_RS03650 PF01957 NfeD-like C-terminal, partner-binding MRP56_RS03655 PF01145 SPFH domain / Band 7 family MRP56_RS03655 PF16200 C-terminal region of band_7 MRP56_RS03660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MRP56_RS03660 PF14824 Sirohaem biosynthesis protein central MRP56_RS03660 PF10414 Sirohaem synthase dimerisation region MRP56_RS03665 PF01507 Phosphoadenosine phosphosulfate reductase family MRP56_RS03670 PF00009 Elongation factor Tu GTP binding domain MRP56_RS03675 PF02080 TrkA-C domain MRP56_RS03675 PF03600 Citrate transporter MRP56_RS03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS03715 PF08447 PAS fold MRP56_RS03735 PF00005 ABC transporter MRP56_RS03750 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MRP56_RS03765 PF00719 Inorganic pyrophosphatase MRP56_RS03770 PF08245 Mur ligase middle domain MRP56_RS03770 PF01225 Mur ligase family, catalytic domain MRP56_RS03770 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS03775 PF02441 Flavoprotein MRP56_RS03780 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS03785 PF00156 Phosphoribosyl transferase domain MRP56_RS03790 PF00005 ABC transporter MRP56_RS03795 PF01061 ABC-2 type transporter MRP56_RS03800 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component MRP56_RS03805 PF01869 BadF/BadG/BcrA/BcrD ATPase family MRP56_RS03825 PF02569 Pantoate-beta-alanine ligase MRP56_RS03830 PF02548 Ketopantoate hydroxymethyltransferase MRP56_RS03835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MRP56_RS03840 PF12626 Polymerase A arginine-rich C-terminus MRP56_RS03840 PF12627 Probable RNA and SrmB- binding site of polymerase A MRP56_RS03840 PF01743 Poly A polymerase head domain MRP56_RS03845 PF00749 tRNA synthetases class I (E and Q), catalytic domain MRP56_RS03850 PF01258 Prokaryotic dksA/traR C4-type zinc finger MRP56_RS03855 PF17746 SfsA N-terminal OB domain MRP56_RS03855 PF03749 Sugar fermentation stimulation protein RE domain MRP56_RS03865 PF04408 Helicase associated domain (HA2) MRP56_RS03865 PF00270 DEAD/DEAH box helicase MRP56_RS03865 PF08482 ATP-dependent helicase C-terminal MRP56_RS03865 PF00271 Helicase conserved C-terminal domain MRP56_RS03870 PF14814 Bifunctional transglycosylase second domain MRP56_RS03870 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS03870 PF00912 Transglycosylase MRP56_RS03875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS03880 PF00893 Small Multidrug Resistance protein MRP56_RS03885 PF00893 Small Multidrug Resistance protein MRP56_RS03895 PF11849 Domain of unknown function (DUF3369) MRP56_RS03905 PF01569 PAP2 superfamily MRP56_RS03920 PF00202 Aminotransferase class-III MRP56_RS03925 PF00654 Voltage gated chloride channel MRP56_RS03935 PF01521 Iron-sulphur cluster biosynthesis MRP56_RS03960 PF01810 LysE type translocator MRP56_RS03970 PF00816 H-NS histone family MRP56_RS03980 PF05930 Prophage CP4-57 regulatory protein (AlpA) MRP56_RS04010 PF00665 Integrase core domain MRP56_RS04015 PF01695 IstB-like ATP binding protein MRP56_RS04040 PF04002 RadC-like JAB domain MRP56_RS04085 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MRP56_RS04090 PF02384 N-6 DNA Methylase MRP56_RS04105 PF02463 RecF/RecN/SMC N terminal domain MRP56_RS04120 PF02954 Bacterial regulatory protein, Fis family MRP56_RS04125 PF01207 Dihydrouridine synthase (Dus) MRP56_RS04130 PF02321 Outer membrane efflux protein MRP56_RS04135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS04165 PF00072 Response regulator receiver domain MRP56_RS04170 PF00854 POT family MRP56_RS04175 PF00483 Nucleotidyl transferase MRP56_RS04185 PF00459 Inositol monophosphatase family MRP56_RS04190 PF03795 YCII-related domain MRP56_RS04195 PF04279 Intracellular septation protein A MRP56_RS04200 PF00282 Pyridoxal-dependent decarboxylase conserved domain MRP56_RS04205 PF03006 Haemolysin-III related MRP56_RS04210 PF06826 Predicted Permease Membrane Region MRP56_RS04210 PF02080 TrkA-C domain MRP56_RS04225 PF01584 CheW-like domain MRP56_RS04225 PF00072 Response regulator receiver domain MRP56_RS04230 PF13472 GDSL-like Lipase/Acylhydrolase family MRP56_RS04235 PF00005 ABC transporter MRP56_RS04245 PF08338 Domain of unknown function (DUF1731) MRP56_RS04245 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS04250 PF00563 EAL domain MRP56_RS04250 PF12792 CSS motif domain associated with EAL MRP56_RS04255 PF00155 Aminotransferase class I and II MRP56_RS04260 PF04389 Peptidase family M28 MRP56_RS04260 PF01483 Proprotein convertase P-domain MRP56_RS04265 PF02390 Putative methyltransferase MRP56_RS04270 PF04320 Protein with unknown function (DUF469) MRP56_RS04275 PF04960 Glutaminase MRP56_RS04280 PF00581 Rhodanese-like domain MRP56_RS04285 PF06004 Bacterial protein of unknown function (DUF903) MRP56_RS04290 PF00664 ABC transporter transmembrane region MRP56_RS04290 PF00005 ABC transporter MRP56_RS04295 PF00561 alpha/beta hydrolase fold MRP56_RS04310 PF00589 Phage integrase family MRP56_RS04330 PF00589 Phage integrase family MRP56_RS04330 PF02899 Phage integrase, N-terminal SAM-like domain MRP56_RS04365 PF05598 Transposase domain (DUF772) MRP56_RS04365 PF01609 Transposase DDE domain MRP56_RS04375 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS04375 PF01590 GAF domain MRP56_RS04375 PF00563 EAL domain MRP56_RS04375 PF00360 Phytochrome region MRP56_RS04385 PF00801 PKD domain MRP56_RS04385 PF05547 Immune inhibitor A peptidase M6 MRP56_RS04390 PF06877 Regulator of ribonuclease activity B MRP56_RS04395 PF00563 EAL domain MRP56_RS04395 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS04395 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS04405 PF12852 Cupin MRP56_RS04405 PF12833 Helix-turn-helix domain MRP56_RS04410 PF02627 Carboxymuconolactone decarboxylase family MRP56_RS04415 PF04224 Protein of unknown function, DUF417 MRP56_RS04430 PF09905 DNA-binding protein VF530 MRP56_RS04435 PF02666 Phosphatidylserine decarboxylase MRP56_RS04440 PF03193 RsgA GTPase MRP56_RS04445 PF00929 Exonuclease MRP56_RS04485 PF00313 'Cold-shock' DNA-binding domain MRP56_RS04495 PF00672 HAMP domain MRP56_RS04495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS04500 PF00749 tRNA synthetases class I (E and Q), catalytic domain MRP56_RS04535 PF06483 Chitinase C MRP56_RS04535 PF00704 Glycosyl hydrolases family 18 MRP56_RS04550 PF02472 Biopolymer transport protein ExbD/TolR MRP56_RS04555 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS04560 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS04570 PF00593 TonB dependent receptor MRP56_RS04570 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS04580 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS04580 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS04590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS04590 PF00005 ABC transporter MRP56_RS04595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS04595 PF00005 ABC transporter MRP56_RS04600 PF07687 Peptidase dimerisation domain MRP56_RS04600 PF01546 Peptidase family M20/M25/M40 MRP56_RS04605 PF00156 Phosphoribosyl transferase domain MRP56_RS04610 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MRP56_RS04615 PF07417 Sigma factor-binding transcriptional regulator Crl MRP56_RS04620 PF00696 Amino acid kinase family MRP56_RS04620 PF01472 PUA domain MRP56_RS04625 PF00171 Aldehyde dehydrogenase family MRP56_RS04635 PF00582 Universal stress protein family MRP56_RS04650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS04650 PF00384 Molybdopterin oxidoreductase MRP56_RS04650 PF01568 Molydopterin dinucleotide binding domain MRP56_RS04650 PF04324 BFD-like [2Fe-2S] binding domain MRP56_RS04655 PF10414 Sirohaem synthase dimerisation region MRP56_RS04655 PF14824 Sirohaem biosynthesis protein central MRP56_RS04655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MRP56_RS04665 PF00005 ABC transporter MRP56_RS04670 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS04675 PF00005 ABC transporter MRP56_RS04680 PF04324 BFD-like [2Fe-2S] binding domain MRP56_RS04680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MRP56_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS04680 PF13806 Rieske-like [2Fe-2S] domain MRP56_RS04680 PF18267 Rubredoxin NAD+ reductase C-terminal domain MRP56_RS04680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MRP56_RS04685 PF18267 Rubredoxin NAD+ reductase C-terminal domain MRP56_RS04685 PF13806 Rieske-like [2Fe-2S] domain MRP56_RS04685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MRP56_RS04685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MRP56_RS04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS04685 PF04324 BFD-like [2Fe-2S] binding domain MRP56_RS04690 PF00294 pfkB family carbohydrate kinase MRP56_RS04695 PF04227 Indigoidine synthase A like protein MRP56_RS04700 PF00194 Eukaryotic-type carbonic anhydrase MRP56_RS04705 PF03150 Di-haem cytochrome c peroxidase MRP56_RS04705 PF00034 Cytochrome c MRP56_RS04740 PF00550 Phosphopantetheine attachment site MRP56_RS04745 PF00550 Phosphopantetheine attachment site MRP56_RS04755 PF00501 AMP-binding enzyme MRP56_RS04755 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS04760 PF07977 FabA-like domain MRP56_RS04770 PF00221 Aromatic amino acid lyase MRP56_RS04795 PF02801 Beta-ketoacyl synthase, C-terminal domain MRP56_RS04795 PF00109 Beta-ketoacyl synthase, N-terminal domain MRP56_RS04810 PF00109 Beta-ketoacyl synthase, N-terminal domain MRP56_RS04810 PF02801 Beta-ketoacyl synthase, C-terminal domain MRP56_RS04820 PF00994 Probable molybdopterin binding domain MRP56_RS04830 PF06738 Putative threonine/serine exporter MRP56_RS04835 PF12821 Threonine/Serine exporter, ThrE MRP56_RS04840 PF00186 Dihydrofolate reductase MRP56_RS04845 PF00005 ABC transporter MRP56_RS04845 PF00571 CBS domain MRP56_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS04855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MRP56_RS04860 PF01507 Phosphoadenosine phosphosulfate reductase family MRP56_RS04865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MRP56_RS04865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MRP56_RS04870 PF00667 FAD binding domain MRP56_RS04870 PF00258 Flavodoxin MRP56_RS04870 PF00175 Oxidoreductase NAD-binding domain MRP56_RS04875 PF02567 Phenazine biosynthesis-like protein MRP56_RS04880 PF00152 tRNA synthetases class II (D, K and N) MRP56_RS04880 PF01336 OB-fold nucleic acid binding domain MRP56_RS04890 PF02743 Cache domain MRP56_RS04890 PF00672 HAMP domain MRP56_RS04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS04895 PF03616 Sodium/glutamate symporter MRP56_RS04900 PF17763 Glutaminase/Asparaginase C-terminal domain MRP56_RS04900 PF00710 Asparaginase, N-terminal MRP56_RS04905 PF07023 Protein of unknown function (DUF1315) MRP56_RS04910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MRP56_RS04910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MRP56_RS04925 PF01343 Peptidase family S49 MRP56_RS04930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MRP56_RS04930 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS04935 PF00881 Nitroreductase family MRP56_RS04950 PF12464 Maltose acetyltransferase MRP56_RS04950 PF14602 Hexapeptide repeat of succinyl-transferase MRP56_RS04955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MRP56_RS04955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS04955 PF01842 ACT domain MRP56_RS04965 PF08240 Alcohol dehydrogenase GroES-like domain MRP56_RS04965 PF00107 Zinc-binding dehydrogenase MRP56_RS04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS04970 PF03466 LysR substrate binding domain MRP56_RS04975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MRP56_RS04975 PF00367 phosphotransferase system, EIIB MRP56_RS04975 PF02378 Phosphotransferase system, EIIC MRP56_RS04980 PF00474 Sodium:solute symporter family MRP56_RS04990 PF02785 Biotin carboxylase C-terminal domain MRP56_RS04990 PF00289 Biotin carboxylase, N-terminal domain MRP56_RS04990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MRP56_RS04995 PF00364 Biotin-requiring enzyme MRP56_RS05000 PF01220 Dehydroquinase class II MRP56_RS05005 PF16177 Acetyl-coenzyme A synthetase N-terminus MRP56_RS05005 PF00501 AMP-binding enzyme MRP56_RS05005 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS05015 PF00563 EAL domain MRP56_RS05015 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS05015 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS05015 PF13188 PAS domain MRP56_RS05035 PF02613 Nitrate reductase delta subunit MRP56_RS05050 PF00464 Serine hydroxymethyltransferase MRP56_RS05060 PF03477 ATP cone domain MRP56_RS05065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MRP56_RS05065 PF01872 RibD C-terminal domain MRP56_RS05070 PF00677 Lumazine binding domain MRP56_RS05075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MRP56_RS05075 PF00925 GTP cyclohydrolase II MRP56_RS05085 PF00885 6,7-dimethyl-8-ribityllumazine synthase MRP56_RS05090 PF01029 NusB family MRP56_RS05095 PF02769 AIR synthase related protein, C-terminal domain MRP56_RS05095 PF00586 AIR synthase related protein, N-terminal domain MRP56_RS05100 PF04608 Phosphatidylglycerophosphatase A MRP56_RS05105 PF00005 ABC transporter MRP56_RS05105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS05110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS05115 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS05120 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS05125 PF02779 Transketolase, pyrimidine binding domain MRP56_RS05125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MRP56_RS05125 PF02780 Transketolase, C-terminal domain MRP56_RS05130 PF00348 Polyprenyl synthetase MRP56_RS05135 PF02609 Exonuclease VII small subunit MRP56_RS05140 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS05145 PF00691 OmpA family MRP56_RS05145 PF13677 Membrane MotB of proton-channel complex MotA/MotB MRP56_RS05150 PF01272 Transcription elongation factor, GreA/GreB, C-term MRP56_RS05150 PF03449 Transcription elongation factor, N-terminal MRP56_RS05160 PF01985 CRS1 / YhbY (CRM) domain MRP56_RS05165 PF01728 FtsJ-like methyltransferase MRP56_RS05170 PF06480 FtsH Extracellular MRP56_RS05170 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS05170 PF17862 AAA+ lid domain MRP56_RS05170 PF01434 Peptidase family M41 MRP56_RS05175 PF00809 Pterin binding enzyme MRP56_RS05180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MRP56_RS05180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MRP56_RS05180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MRP56_RS05180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MRP56_RS05185 PF00121 Triosephosphate isomerase MRP56_RS05190 PF03840 Preprotein translocase SecG subunit MRP56_RS05205 PF02576 RimP N-terminal domain MRP56_RS05205 PF17384 RimP C-terminal SH3 domain MRP56_RS05210 PF13184 NusA-like KH domain MRP56_RS05210 PF00575 S1 RNA binding domain MRP56_RS05210 PF08529 NusA N-terminal domain MRP56_RS05215 PF00009 Elongation factor Tu GTP binding domain MRP56_RS05215 PF11987 Translation-initiation factor 2 MRP56_RS05215 PF08364 Bacterial translation initiation factor IF-2 associated region MRP56_RS05215 PF04760 Translation initiation factor IF-2, N-terminal region MRP56_RS05220 PF02033 Ribosome-binding factor A MRP56_RS05225 PF09157 Pseudouridine synthase II TruB, C-terminal MRP56_RS05225 PF16198 tRNA pseudouridylate synthase B C-terminal domain MRP56_RS05225 PF01509 TruB family pseudouridylate synthase (N terminal domain) MRP56_RS05230 PF00312 Ribosomal protein S15 MRP56_RS05235 PF01138 3' exoribonuclease family, domain 1 MRP56_RS05235 PF00575 S1 RNA binding domain MRP56_RS05235 PF03725 3' exoribonuclease family, domain 2 MRP56_RS05235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MRP56_RS05235 PF00013 KH domain MRP56_RS05240 PF07690 Major Facilitator Superfamily MRP56_RS05245 PF00563 EAL domain MRP56_RS05245 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS05245 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS05250 PF02635 DsrE/DsrF-like family MRP56_RS05260 PF10415 Fumarase C C-terminus MRP56_RS05260 PF00206 Lyase MRP56_RS05265 PF03575 Peptidase family S51 MRP56_RS05270 PF02554 Carbon starvation protein CstA MRP56_RS05270 PF13722 5TM C-terminal transporter carbon starvation CstA MRP56_RS05275 PF04397 LytTr DNA-binding domain MRP56_RS05275 PF00072 Response regulator receiver domain MRP56_RS05280 PF07694 5TMR of 5TMR-LYT MRP56_RS05280 PF06580 Histidine kinase MRP56_RS05285 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS05285 PF00072 Response regulator receiver domain MRP56_RS05290 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS05290 PF00989 PAS fold MRP56_RS05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS05295 PF13247 4Fe-4S dicluster domain MRP56_RS05300 PF03916 Polysulphide reductase, NrfD MRP56_RS05305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS05305 PF00384 Molybdopterin oxidoreductase MRP56_RS05305 PF01568 Molydopterin dinucleotide binding domain MRP56_RS05325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MRP56_RS05330 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MRP56_RS05335 PF17969 L,D-transpeptidase C-terminal domain MRP56_RS05335 PF03734 L,D-transpeptidase catalytic domain MRP56_RS05345 PF01523 Putative modulator of DNA gyrase MRP56_RS05350 PF01523 Putative modulator of DNA gyrase MRP56_RS05355 PF00258 Flavodoxin MRP56_RS05360 PF00589 Phage integrase family MRP56_RS05360 PF02899 Phage integrase, N-terminal SAM-like domain MRP56_RS05365 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS05370 PF01741 Large-conductance mechanosensitive channel, MscL MRP56_RS05375 PF10411 Disulfide bond isomerase protein N-terminus MRP56_RS05375 PF13098 Thioredoxin-like domain MRP56_RS05380 PF01368 DHH family MRP56_RS05380 PF02272 DHHA1 domain MRP56_RS05380 PF17768 RecJ OB domain MRP56_RS05385 PF13411 MerR HTH family regulatory protein MRP56_RS05400 PF02508 Rnf-Nqr subunit, membrane protein MRP56_RS05405 PF06821 Serine hydrolase MRP56_RS05415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MRP56_RS05415 PF04055 Radical SAM superfamily MRP56_RS05420 PF03099 Biotin/lipoate A/B protein ligase family MRP56_RS05425 PF04359 Protein of unknown function (DUF493) MRP56_RS05430 PF07943 Penicillin-binding protein 5, C-terminal domain MRP56_RS05430 PF00768 D-alanyl-D-alanine carboxypeptidase MRP56_RS05435 PF03330 Lytic transglycolase MRP56_RS05435 PF05036 Sporulation related domain MRP56_RS05440 PF13406 Transglycosylase SLT domain MRP56_RS05445 PF01098 Cell cycle protein MRP56_RS05450 PF01098 Cell cycle protein MRP56_RS05455 PF03717 Penicillin-binding Protein dimerisation domain MRP56_RS05455 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS05460 PF02590 Predicted SPOUT methyltransferase MRP56_RS05470 PF01467 Cytidylyltransferase-like MRP56_RS05485 PF08264 Anticodon-binding domain of tRNA MRP56_RS05485 PF13603 Leucyl-tRNA synthetase, Domain 2 MRP56_RS05485 PF00133 tRNA synthetases class I (I, L, M and V) MRP56_RS05490 PF07295 Zinc-ribbon containing domain MRP56_RS05495 PF00795 Carbon-nitrogen hydrolase MRP56_RS05500 PF03471 Transporter associated domain MRP56_RS05500 PF00571 CBS domain MRP56_RS05505 PF02130 Uncharacterized protein family UPF0054 MRP56_RS05510 PF02562 PhoH-like protein MRP56_RS05515 PF04055 Radical SAM superfamily MRP56_RS05515 PF00919 Uncharacterized protein family UPF0004 MRP56_RS05515 PF01938 TRAM domain MRP56_RS05520 PF01494 FAD binding domain MRP56_RS05525 PF00857 Isochorismatase family MRP56_RS05530 PF00313 'Cold-shock' DNA-binding domain MRP56_RS05535 PF05230 MASE2 domain MRP56_RS05535 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS05540 PF03466 LysR substrate binding domain MRP56_RS05550 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS05560 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS05570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS05570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MRP56_RS05580 PF09997 Predicted membrane protein (DUF2238) MRP56_RS05585 PF09285 Elongation factor P, C-terminal MRP56_RS05585 PF08207 Elongation factor P (EF-P) KOW-like domain MRP56_RS05585 PF01132 Elongation factor P (EF-P) OB domain MRP56_RS05595 PF00478 IMP dehydrogenase / GMP reductase domain MRP56_RS05605 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS05605 PF08521 Two-component sensor kinase N-terminal MRP56_RS05610 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS05610 PF00072 Response regulator receiver domain MRP56_RS05630 PF00501 AMP-binding enzyme MRP56_RS05645 PF06224 Winged helix DNA-binding domain MRP56_RS05665 PF02313 Fumarate reductase subunit D MRP56_RS05670 PF02300 Fumarate reductase subunit C MRP56_RS05675 PF13085 2Fe-2S iron-sulfur cluster binding domain MRP56_RS05675 PF13183 4Fe-4S dicluster domain MRP56_RS05680 PF02910 Fumarate reductase flavoprotein C-term MRP56_RS05680 PF00890 FAD binding domain MRP56_RS05685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS05685 PF00672 HAMP domain MRP56_RS05685 PF02743 Cache domain MRP56_RS05690 PF03009 Glycerophosphoryl diester phosphodiesterase family MRP56_RS05695 PF00924 Mechanosensitive ion channel MRP56_RS05695 PF12795 Mechanosensitive ion channel porin domain MRP56_RS05695 PF12794 Mechanosensitive ion channel inner membrane domain 1 MRP56_RS05720 PF03466 LysR substrate binding domain MRP56_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS05735 PF02743 Cache domain MRP56_RS05735 PF00672 HAMP domain MRP56_RS05735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS05740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS05740 PF03466 LysR substrate binding domain MRP56_RS05745 PF00912 Transglycosylase MRP56_RS05745 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS05745 PF17092 Penicillin-binding protein OB-like domain MRP56_RS05750 PF11104 Type IV pilus assembly protein PilM; MRP56_RS05760 PF04350 Pilus assembly protein, PilO MRP56_RS05770 PF00263 Bacterial type II and III secretion system protein MRP56_RS05770 PF11741 AMIN domain MRP56_RS05770 PF07660 Secretin and TonB N terminus short domain MRP56_RS05770 PF03958 Bacterial type II/III secretion system short domain MRP56_RS05775 PF01202 Shikimate kinase MRP56_RS05780 PF01761 3-dehydroquinate synthase MRP56_RS05790 PF02086 D12 class N6 adenine-specific DNA methyltransferase MRP56_RS05800 PF00834 Ribulose-phosphate 3 epimerase family MRP56_RS05805 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS05810 PF00579 tRNA synthetases class I (W and Y) MRP56_RS05820 PF00117 Glutamine amidotransferase class-I MRP56_RS05825 PF00202 Aminotransferase class-III MRP56_RS05830 PF04958 Arginine N-succinyltransferase beta subunit MRP56_RS05835 PF00171 Aldehyde dehydrogenase family MRP56_RS05845 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS05850 PF07690 Major Facilitator Superfamily MRP56_RS05855 PF10371 Domain of unknown function MRP56_RS05855 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MRP56_RS05855 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MRP56_RS05855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS05855 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MRP56_RS05860 PF07690 Major Facilitator Superfamily MRP56_RS05865 PF00005 ABC transporter MRP56_RS05865 PF12848 ABC transporter MRP56_RS05875 PF00128 Alpha amylase, catalytic domain MRP56_RS05875 PF16657 Maltogenic Amylase, C-terminal domain MRP56_RS05885 PF04266 ASCH domain MRP56_RS05895 PF01048 Phosphorylase superfamily MRP56_RS05900 PF04973 Nicotinamide mononucleotide transporter MRP56_RS05905 PF02080 TrkA-C domain MRP56_RS05905 PF03600 Citrate transporter MRP56_RS05950 PF01926 50S ribosome-binding GTPase MRP56_RS05950 PF06071 Protein of unknown function (DUF933) MRP56_RS05955 PF01195 Peptidyl-tRNA hydrolase MRP56_RS05960 PF02872 5'-nucleotidase, C-terminal domain MRP56_RS05960 PF00149 Calcineurin-like phosphoesterase MRP56_RS05965 PF14572 Phosphoribosyl synthetase-associated domain MRP56_RS05965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MRP56_RS05975 PF08544 GHMP kinases C terminal MRP56_RS05975 PF00288 GHMP kinases N terminal domain MRP56_RS05980 PF03550 Outer membrane lipoprotein LolB MRP56_RS05985 PF01488 Shikimate / quinate 5-dehydrogenase MRP56_RS05985 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MRP56_RS05985 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MRP56_RS05990 PF03462 PCRF domain MRP56_RS05990 PF00472 RF-1 domain MRP56_RS05995 PF13847 Methyltransferase domain MRP56_RS05995 PF17827 PrmC N-terminal domain MRP56_RS06005 PF13369 Transglutaminase-like superfamily MRP56_RS06010 PF00793 DAHP synthetase I family MRP56_RS06015 PF00375 Sodium:dicarboxylate symporter family MRP56_RS06020 PF01228 Glycine radical MRP56_RS06025 PF03167 Uracil DNA glycosylase superfamily MRP56_RS06040 PF00923 Transaldolase/Fructose-6-phosphate aldolase MRP56_RS06045 PF01235 Sodium:alanine symporter family MRP56_RS06050 PF11992 Domain of unknown function (DUF3488) MRP56_RS06050 PF01841 Transglutaminase-like superfamily MRP56_RS06050 PF13559 Domain of unknown function (DUF4129) MRP56_RS06060 PF17863 AAA lid domain MRP56_RS06060 PF07726 ATPase family associated with various cellular activities (AAA) MRP56_RS06065 PF00144 Beta-lactamase MRP56_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS06080 PF03466 LysR substrate binding domain MRP56_RS06090 PF00854 POT family MRP56_RS06095 PF03652 Holliday junction resolvase MRP56_RS06100 PF02622 Uncharacterized ACR, COG1678 MRP56_RS06105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS06105 PF00672 HAMP domain MRP56_RS06105 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS06110 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MRP56_RS06110 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MRP56_RS06115 PF04452 RNA methyltransferase MRP56_RS06120 PF04231 Endonuclease I MRP56_RS06125 PF10263 SprT-like family MRP56_RS06125 PF17283 SprT-like zinc ribbon domain MRP56_RS06130 PF02773 S-adenosylmethionine synthetase, C-terminal domain MRP56_RS06130 PF02772 S-adenosylmethionine synthetase, central domain MRP56_RS06130 PF00438 S-adenosylmethionine synthetase, N-terminal domain MRP56_RS06135 PF02779 Transketolase, pyrimidine binding domain MRP56_RS06135 PF02780 Transketolase, C-terminal domain MRP56_RS06135 PF00456 Transketolase, thiamine diphosphate binding domain MRP56_RS06145 PF01042 Endoribonuclease L-PSP MRP56_RS06150 PF01965 DJ-1/PfpI family MRP56_RS06155 PF03702 Anhydro-N-acetylmuramic acid kinase MRP56_RS06160 PF01476 LysM domain MRP56_RS06160 PF08525 Opacity-associated protein A N-terminal motif MRP56_RS06160 PF01551 Peptidase family M23 MRP56_RS06165 PF00579 tRNA synthetases class I (W and Y) MRP56_RS06170 PF01204 Trehalase MRP56_RS06180 PF01161 Phosphatidylethanolamine-binding protein MRP56_RS06185 PF00709 Adenylosuccinate synthetase MRP56_RS06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS06190 PF03466 LysR substrate binding domain MRP56_RS06200 PF00155 Aminotransferase class I and II MRP56_RS06205 PF07690 Major Facilitator Superfamily MRP56_RS06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS06210 PF03466 LysR substrate binding domain MRP56_RS06215 PF00106 short chain dehydrogenase MRP56_RS06220 PF08496 Peptidase family S49 N-terminal MRP56_RS06220 PF01343 Peptidase family S49 MRP56_RS06225 PF04996 Succinylarginine dihydrolase MRP56_RS06230 PF01131 DNA topoisomerase MRP56_RS06230 PF08272 Topoisomerase I zinc-ribbon-like MRP56_RS06230 PF01751 Toprim domain MRP56_RS06230 PF01396 Topoisomerase DNA binding C4 zinc finger MRP56_RS06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS06245 PF08447 PAS fold MRP56_RS06250 PF00728 Glycosyl hydrolase family 20, catalytic domain MRP56_RS06250 PF02838 Glycosyl hydrolase family 20, domain 2 MRP56_RS06255 PF01869 BadF/BadG/BcrA/BcrD ATPase family MRP56_RS06265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS06265 PF00005 ABC transporter MRP56_RS06270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS06270 PF00005 ABC transporter MRP56_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS06275 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS06285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS06290 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS06290 PF09308 LuxQ, periplasmic MRP56_RS06290 PF00072 Response regulator receiver domain MRP56_RS06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS06310 PF10725 Protein of unknown function (DUF2517) MRP56_RS06320 PF05114 Protein of unknown function (DUF692) MRP56_RS06355 PF04632 Fusaric acid resistance protein family MRP56_RS06360 PF00994 Probable molybdopterin binding domain MRP56_RS06360 PF03454 MoeA C-terminal region (domain IV) MRP56_RS06360 PF03453 MoeA N-terminal region (domain I and II) MRP56_RS06365 PF12804 MobA-like NTP transferase domain MRP56_RS06370 PF00005 ABC transporter MRP56_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS06380 PF12849 PBP superfamily domain MRP56_RS06385 PF00072 Response regulator receiver domain MRP56_RS06385 PF02954 Bacterial regulatory protein, Fis family MRP56_RS06385 PF00158 Sigma-54 interaction domain MRP56_RS06390 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS06390 PF00989 PAS fold MRP56_RS06395 PF12727 PBP superfamily domain MRP56_RS06395 PF12728 Helix-turn-helix domain MRP56_RS06400 PF02634 FdhD/NarQ family MRP56_RS06435 PF01568 Molydopterin dinucleotide binding domain MRP56_RS06435 PF12838 4Fe-4S dicluster domain MRP56_RS06435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS06435 PF12838 4Fe-4S dicluster domain MRP56_RS06435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS06435 PF00384 Molybdopterin oxidoreductase MRP56_RS06435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MRP56_RS06435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MRP56_RS06435 PF00384 Molybdopterin oxidoreductase MRP56_RS06435 PF01568 Molydopterin dinucleotide binding domain MRP56_RS06440 PF13247 4Fe-4S dicluster domain MRP56_RS06450 PF00072 Response regulator receiver domain MRP56_RS06455 PF03949 Malic enzyme, NAD binding domain MRP56_RS06455 PF00390 Malic enzyme, N-terminal domain MRP56_RS06460 PF05433 Glycine zipper 2TM domain MRP56_RS06460 PF16998 17 kDa outer membrane surface antigen MRP56_RS06470 PF00860 Permease family MRP56_RS06475 PF10282 Lactonase, 7-bladed beta-propeller MRP56_RS06485 PF00924 Mechanosensitive ion channel MRP56_RS06485 PF12795 Mechanosensitive ion channel porin domain MRP56_RS06485 PF12794 Mechanosensitive ion channel inner membrane domain 1 MRP56_RS06490 PF00224 Pyruvate kinase, barrel domain MRP56_RS06490 PF02887 Pyruvate kinase, alpha/beta domain MRP56_RS06500 PF04151 Bacterial pre-peptidase C-terminal domain MRP56_RS06500 PF04389 Peptidase family M28 MRP56_RS06505 PF00999 Sodium/hydrogen exchanger family MRP56_RS06505 PF02254 TrkA-N domain MRP56_RS06515 PF04381 Putative exonuclease, RdgC MRP56_RS06525 PF00149 Calcineurin-like phosphoesterase MRP56_RS06525 PF12320 Type 5 capsule protein repressor C-terminal domain MRP56_RS06535 PF01292 Prokaryotic cytochrome b561 MRP56_RS06545 PF00072 Response regulator receiver domain MRP56_RS06545 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS06550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MRP56_RS06555 PF00391 PEP-utilising enzyme, mobile domain MRP56_RS06555 PF02896 PEP-utilising enzyme, TIM barrel domain MRP56_RS06555 PF05524 PEP-utilising enzyme, N-terminal MRP56_RS06560 PF00381 PTS HPr component phosphorylation site MRP56_RS06565 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS06570 PF17871 AAA lid domain MRP56_RS06570 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS06570 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS06570 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS06570 PF02861 Clp amino terminal domain, pathogenicity island component MRP56_RS06580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MRP56_RS06580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MRP56_RS06585 PF01980 tRNA-methyltransferase O MRP56_RS06585 PF18389 TrmO C-terminal domain MRP56_RS06605 PF00664 ABC transporter transmembrane region MRP56_RS06605 PF00005 ABC transporter MRP56_RS06610 PF00005 ABC transporter MRP56_RS06610 PF00664 ABC transporter transmembrane region MRP56_RS06625 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS06625 PF00072 Response regulator receiver domain MRP56_RS06635 PF03737 Aldolase/RraA MRP56_RS06650 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MRP56_RS06655 PF00588 SpoU rRNA Methylase family MRP56_RS06660 PF00696 Amino acid kinase family MRP56_RS06660 PF01842 ACT domain MRP56_RS06660 PF13840 ACT domain MRP56_RS06660 PF00742 Homoserine dehydrogenase MRP56_RS06660 PF03447 Homoserine dehydrogenase, NAD binding domain MRP56_RS06665 PF08544 GHMP kinases C terminal MRP56_RS06665 PF00288 GHMP kinases N terminal domain MRP56_RS06670 PF14821 Threonine synthase N terminus MRP56_RS06670 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS06685 PF00005 ABC transporter MRP56_RS06685 PF12848 ABC transporter MRP56_RS06705 PF01048 Phosphorylase superfamily MRP56_RS06720 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS06720 PF01627 Hpt domain MRP56_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS06720 PF00989 PAS fold MRP56_RS06720 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS06720 PF00072 Response regulator receiver domain MRP56_RS06725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MRP56_RS06730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS06730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MRP56_RS06735 PF02690 Na+/Pi-cotransporter MRP56_RS06745 PF13520 Amino acid permease MRP56_RS06755 PF00324 Amino acid permease MRP56_RS06760 PF00202 Aminotransferase class-III MRP56_RS06765 PF00171 Aldehyde dehydrogenase family MRP56_RS06770 PF07883 Cupin domain MRP56_RS06770 PF01381 Helix-turn-helix MRP56_RS06775 PF01266 FAD dependent oxidoreductase MRP56_RS06790 PF00816 H-NS histone family MRP56_RS06795 PF00793 DAHP synthetase I family MRP56_RS06800 PF04954 Siderophore-interacting protein MRP56_RS06800 PF08021 Siderophore-interacting FAD-binding domain MRP56_RS06805 PF02321 Outer membrane efflux protein MRP56_RS06810 PF12704 MacB-like periplasmic core domain MRP56_RS06810 PF00005 ABC transporter MRP56_RS06810 PF02687 FtsX-like permease family MRP56_RS06815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS06825 PF01368 DHH family MRP56_RS06825 PF02833 DHHA2 domain MRP56_RS06830 PF02463 RecF/RecN/SMC N terminal domain MRP56_RS06835 PF01513 ATP-NAD kinase MRP56_RS06840 PF01025 GrpE MRP56_RS06845 PF00012 Hsp70 protein MRP56_RS06850 PF00226 DnaJ domain MRP56_RS06850 PF01556 DnaJ C terminal domain MRP56_RS06850 PF00684 DnaJ central domain MRP56_RS06855 PF11471 Maltoporin periplasmic N-terminal extension MRP56_RS06855 PF02264 LamB porin MRP56_RS06860 PF00294 pfkB family carbohydrate kinase MRP56_RS06865 PF02378 Phosphotransferase system, EIIC MRP56_RS06865 PF00367 phosphotransferase system, EIIB MRP56_RS06870 PF00251 Glycosyl hydrolases family 32 N-terminal domain MRP56_RS06870 PF08244 Glycosyl hydrolases family 32 C terminal MRP56_RS06875 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS06875 PF13407 Periplasmic binding protein domain MRP56_RS06880 PF02308 MgtC family MRP56_RS06895 PF01022 Bacterial regulatory protein, arsR family MRP56_RS06900 PF04143 Sulphur transport MRP56_RS06915 PF00873 AcrB/AcrD/AcrF family MRP56_RS06920 PF00563 EAL domain MRP56_RS06920 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS06920 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS06925 PF03099 Biotin/lipoate A/B protein ligase family MRP56_RS06925 PF10437 Bacterial lipoate protein ligase C-terminus MRP56_RS06945 PF00873 AcrB/AcrD/AcrF family MRP56_RS06950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS06950 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS06960 PF00873 AcrB/AcrD/AcrF family MRP56_RS06965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS06970 PF03372 Endonuclease/Exonuclease/phosphatase family MRP56_RS06985 PF07690 Major Facilitator Superfamily MRP56_RS06990 PF02424 ApbE family MRP56_RS06995 PF00127 Copper binding proteins, plastocyanin/azurin family MRP56_RS07010 PF01156 Inosine-uridine preferring nucleoside hydrolase MRP56_RS07020 PF00034 Cytochrome c MRP56_RS07020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MRP56_RS07030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MRP56_RS07030 PF06481 COX Aromatic Rich Motif MRP56_RS07035 PF00115 Cytochrome C and Quinol oxidase polypeptide I MRP56_RS07040 PF00510 Cytochrome c oxidase subunit III MRP56_RS07045 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MRP56_RS07050 PF01040 UbiA prenyltransferase family MRP56_RS07055 PF07690 Major Facilitator Superfamily MRP56_RS07065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MRP56_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS07075 PF00005 ABC transporter MRP56_RS07080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MRP56_RS07090 PF07662 Na+ dependent nucleoside transporter C-terminus MRP56_RS07090 PF01773 Na+ dependent nucleoside transporter N-terminus MRP56_RS07090 PF07670 Nucleoside recognition MRP56_RS07110 PF04307 LexA-binding, inner membrane-associated putative hydrolase MRP56_RS07130 PF00290 Tryptophan synthase alpha chain MRP56_RS07135 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS07140 PF00218 Indole-3-glycerol phosphate synthase MRP56_RS07140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MRP56_RS07145 PF02885 Glycosyl transferase family, helical bundle domain MRP56_RS07145 PF00591 Glycosyl transferase family, a/b domain MRP56_RS07150 PF00117 Glutamine amidotransferase class-I MRP56_RS07150 PF02885 Glycosyl transferase family, helical bundle domain MRP56_RS07150 PF00591 Glycosyl transferase family, a/b domain MRP56_RS07155 PF00425 chorismate binding enzyme MRP56_RS07155 PF04715 Anthranilate synthase component I, N terminal region MRP56_RS07160 PF02811 PHP domain MRP56_RS07165 PF01300 Telomere recombination MRP56_RS07170 PF02616 Segregation and condensation protein ScpA MRP56_RS07175 PF04079 Segregation and condensation complex subunit ScpB MRP56_RS07180 PF00849 RNA pseudouridylate synthase MRP56_RS07180 PF01479 S4 domain MRP56_RS07200 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS07200 PF08361 MAATS-type transcriptional repressor, C-terminal region MRP56_RS07205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS07205 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS07210 PF00873 AcrB/AcrD/AcrF family MRP56_RS07215 PF02321 Outer membrane efflux protein MRP56_RS07220 PF16363 GDP-mannose 4,6 dehydratase MRP56_RS07225 PF02350 UDP-N-acetylglucosamine 2-epimerase MRP56_RS07230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MRP56_RS07230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MRP56_RS07230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MRP56_RS07235 PF16363 GDP-mannose 4,6 dehydratase MRP56_RS07240 PF04321 RmlD substrate binding domain MRP56_RS07245 PF00483 Nucleotidyl transferase MRP56_RS07250 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MRP56_RS07255 PF05523 WxcM-like, C-terminal MRP56_RS07265 PF00106 short chain dehydrogenase MRP56_RS07270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MRP56_RS07295 PF13936 Helix-turn-helix domain MRP56_RS07295 PF00665 Integrase core domain MRP56_RS07310 PF00535 Glycosyl transferase family 2 MRP56_RS07320 PF00117 Glutamine amidotransferase class-I MRP56_RS07325 PF00977 Histidine biosynthesis protein MRP56_RS07330 PF08485 Polysaccharide biosynthesis protein C-terminal MRP56_RS07330 PF02719 Polysaccharide biosynthesis protein MRP56_RS07335 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS07340 PF02350 UDP-N-acetylglucosamine 2-epimerase MRP56_RS07350 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS07355 PF02397 Bacterial sugar transferase MRP56_RS07360 PF02719 Polysaccharide biosynthesis protein MRP56_RS07365 PF16363 GDP-mannose 4,6 dehydratase MRP56_RS07370 PF04321 RmlD substrate binding domain MRP56_RS07375 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MRP56_RS07380 PF02706 Chain length determinant protein MRP56_RS07390 PF13614 AAA domain MRP56_RS07390 PF13807 G-rich domain on putative tyrosine kinase MRP56_RS07390 PF02706 Chain length determinant protein MRP56_RS07410 PF06082 Exopolysaccharide biosynthesis protein YbjH MRP56_RS07425 PF04337 Protein of unknown function, DUF480 MRP56_RS07430 PF00176 SNF2 family N-terminal domain MRP56_RS07430 PF04434 SWIM zinc finger MRP56_RS07430 PF00271 Helicase conserved C-terminal domain MRP56_RS07435 PF05472 DNA replication terminus site-binding protein (Ter protein) MRP56_RS07445 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MRP56_RS07450 PF00676 Dehydrogenase E1 component MRP56_RS07455 PF02779 Transketolase, pyrimidine binding domain MRP56_RS07455 PF02780 Transketolase, C-terminal domain MRP56_RS07460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MRP56_RS07460 PF00364 Biotin-requiring enzyme MRP56_RS07460 PF02817 e3 binding domain MRP56_RS07465 PF00313 'Cold-shock' DNA-binding domain MRP56_RS07490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS07495 PF00892 EamA-like transporter family MRP56_RS07500 PF00455 DeoR C terminal sensor domain MRP56_RS07500 PF08220 DeoR-like helix-turn-helix domain MRP56_RS07505 PF01228 Glycine radical MRP56_RS07505 PF02901 Pyruvate formate lyase-like MRP56_RS07510 PF04055 Radical SAM superfamily MRP56_RS07515 PF00923 Transaldolase/Fructose-6-phosphate aldolase MRP56_RS07525 PF11871 Domain of unknown function (DUF3391) MRP56_RS07525 PF01966 HD domain MRP56_RS07530 PF00849 RNA pseudouridylate synthase MRP56_RS07530 PF01479 S4 domain MRP56_RS07540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS07545 PF12850 Calcineurin-like phosphoesterase superfamily domain MRP56_RS07560 PF13144 Chaperone for flagella basal body P-ring formation MRP56_RS07565 PF00072 Response regulator receiver domain MRP56_RS07565 PF01584 CheW-like domain MRP56_RS07570 PF03705 CheR methyltransferase, all-alpha domain MRP56_RS07570 PF01739 CheR methyltransferase, SAM binding domain MRP56_RS07575 PF00460 Flagella basal body rod protein MRP56_RS07580 PF00460 Flagella basal body rod protein MRP56_RS07580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MRP56_RS07590 PF07559 Flagellar basal body protein FlaE MRP56_RS07590 PF00460 Flagella basal body rod protein MRP56_RS07590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MRP56_RS07595 PF00460 Flagella basal body rod protein MRP56_RS07595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MRP56_RS07600 PF00460 Flagella basal body rod protein MRP56_RS07600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MRP56_RS07605 PF02107 Flagellar L-ring protein MRP56_RS07610 PF02119 Flagellar P-ring protein MRP56_RS07615 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MRP56_RS07615 PF10135 Rod binding protein MRP56_RS07620 PF00460 Flagella basal body rod protein MRP56_RS07620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MRP56_RS07625 PF00669 Bacterial flagellin N-terminal helical region MRP56_RS07630 PF01769 Divalent cation transporter MRP56_RS07630 PF03448 MgtE intracellular N domain MRP56_RS07630 PF00571 CBS domain MRP56_RS07635 PF02541 Ppx/GppA phosphatase family MRP56_RS07640 PF02503 Polyphosphate kinase middle domain MRP56_RS07640 PF13089 Polyphosphate kinase N-terminal domain MRP56_RS07640 PF17941 Polyphosphate kinase C-terminal domain 1 MRP56_RS07640 PF13090 Polyphosphate kinase C-terminal domain 2 MRP56_RS07645 PF01842 ACT domain MRP56_RS07655 PF00158 Sigma-54 interaction domain MRP56_RS07655 PF06490 Flagellar regulatory protein FleQ MRP56_RS07655 PF02954 Bacterial regulatory protein, Fis family MRP56_RS07660 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS07660 PF13188 PAS domain MRP56_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS07665 PF02954 Bacterial regulatory protein, Fis family MRP56_RS07665 PF00072 Response regulator receiver domain MRP56_RS07665 PF00158 Sigma-54 interaction domain MRP56_RS07670 PF01784 NIF3 (NGG1p interacting factor 3) MRP56_RS07675 PF00551 Formyl transferase MRP56_RS07680 PF00586 AIR synthase related protein, N-terminal domain MRP56_RS07680 PF02769 AIR synthase related protein, C-terminal domain MRP56_RS07695 PF00308 Bacterial dnaA protein MRP56_RS07700 PF00463 Isocitrate lyase family MRP56_RS07705 PF01274 Malate synthase MRP56_RS07720 PF14437 MafB19-like deaminase MRP56_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS07735 PF00005 ABC transporter MRP56_RS07740 PF01895 PhoU domain MRP56_RS07745 PF03471 Transporter associated domain MRP56_RS07745 PF01595 Cyclin M transmembrane N-terminal domain MRP56_RS07745 PF00571 CBS domain MRP56_RS07755 PF02607 B12 binding domain MRP56_RS07755 PF02965 Vitamin B12 dependent methionine synthase, activation domain MRP56_RS07755 PF00809 Pterin binding enzyme MRP56_RS07755 PF02574 Homocysteine S-methyltransferase MRP56_RS07755 PF02310 B12 binding domain MRP56_RS07760 PF13520 Amino acid permease MRP56_RS07765 PF04116 Fatty acid hydroxylase superfamily MRP56_RS07775 PF00005 ABC transporter MRP56_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS07785 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS07790 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS07790 PF08448 PAS fold MRP56_RS07795 PF07690 Major Facilitator Superfamily MRP56_RS07800 PF05231 MASE1 MRP56_RS07800 PF07730 Histidine kinase MRP56_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS07805 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS07805 PF00072 Response regulator receiver domain MRP56_RS07810 PF01272 Transcription elongation factor, GreA/GreB, C-term MRP56_RS07810 PF14760 Rnk N-terminus MRP56_RS07825 PF00245 Alkaline phosphatase MRP56_RS07830 PF00245 Alkaline phosphatase MRP56_RS07835 PF01926 50S ribosome-binding GTPase MRP56_RS07840 PF07690 Major Facilitator Superfamily MRP56_RS07845 PF00850 Histone deacetylase domain MRP56_RS07855 PF13307 Helicase C-terminal domain MRP56_RS07855 PF06733 DEAD_2 MRP56_RS07860 PF13609 Gram-negative porin MRP56_RS07870 PF00155 Aminotransferase class I and II MRP56_RS07875 PF05872 Bacterial protein of unknown function (DUF853) MRP56_RS07890 PF00753 Metallo-beta-lactamase superfamily MRP56_RS07890 PF03772 Competence protein MRP56_RS07895 PF00005 ABC transporter MRP56_RS07895 PF00664 ABC transporter transmembrane region MRP56_RS07900 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MRP56_RS07905 PF03966 Trm112p-like protein MRP56_RS07910 PF02348 Cytidylyltransferase MRP56_RS07915 PF00072 Response regulator receiver domain MRP56_RS07915 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS07920 PF08459 UvrC Helix-hairpin-helix N-terminal MRP56_RS07920 PF02151 UvrB/uvrC motif MRP56_RS07920 PF01541 GIY-YIG catalytic domain MRP56_RS07925 PF01066 CDP-alcohol phosphatidyltransferase MRP56_RS07945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS07945 PF13426 PAS domain MRP56_RS07945 PF08447 PAS fold MRP56_RS07950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS07950 PF00672 HAMP domain MRP56_RS07955 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB MRP56_RS07960 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MRP56_RS07985 PF00037 4Fe-4S binding domain MRP56_RS07985 PF13247 4Fe-4S dicluster domain MRP56_RS07990 PF03916 Polysulphide reductase, NrfD MRP56_RS07995 PF00149 Calcineurin-like phosphoesterase MRP56_RS08005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MRP56_RS08010 PF09190 DALR domain MRP56_RS08010 PF01406 tRNA synthetases class I (C) catalytic domain MRP56_RS08025 PF13185 GAF domain MRP56_RS08025 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS08055 PF01169 Uncharacterized protein family UPF0016 MRP56_RS08060 PF01253 Translation initiation factor SUI1 MRP56_RS08070 PF07664 Ferrous iron transport protein B C terminus MRP56_RS08070 PF07670 Nucleoside recognition MRP56_RS08070 PF02421 Ferrous iron transport protein B MRP56_RS08085 PF00483 Nucleotidyl transferase MRP56_RS08090 PF00437 Type II/IV secretion system protein MRP56_RS08100 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS08100 PF00072 Response regulator receiver domain MRP56_RS08100 PF00989 PAS fold MRP56_RS08100 PF01627 Hpt domain MRP56_RS08100 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS08105 PF01032 FecCD transport family MRP56_RS08110 PF00005 ABC transporter MRP56_RS08115 PF00583 Acetyltransferase (GNAT) family MRP56_RS08120 PF00793 DAHP synthetase I family MRP56_RS08125 PF01219 Prokaryotic diacylglycerol kinase MRP56_RS08130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MRP56_RS08130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS08130 PF01842 ACT domain MRP56_RS08135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MRP56_RS08140 PF01812 5-formyltetrahydrofolate cyclo-ligase family MRP56_RS08150 PF05173 Dihydrodipicolinate reductase, C-terminus MRP56_RS08150 PF01113 Dihydrodipicolinate reductase, N-terminus MRP56_RS08155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MRP56_RS08155 PF00117 Glutamine amidotransferase class-I MRP56_RS08160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MRP56_RS08160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MRP56_RS08160 PF02142 MGS-like domain MRP56_RS08165 PF08502 LeuA allosteric (dimerisation) domain MRP56_RS08165 PF00682 HMGL-like MRP56_RS08170 PF07759 Protein of unknown function (DUF1615) MRP56_RS08195 PF13302 Acetyltransferase (GNAT) domain MRP56_RS08200 PF00270 DEAD/DEAH box helicase MRP56_RS08200 PF00271 Helicase conserved C-terminal domain MRP56_RS08210 PF14521 Lysine-specific metallo-endopeptidase MRP56_RS08225 PF09278 MerR, DNA binding MRP56_RS08225 PF00376 MerR family regulatory protein MRP56_RS08240 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS08250 PF00005 ABC transporter MRP56_RS08255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MRP56_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS08260 PF01645 Conserved region in glutamate synthase MRP56_RS08260 PF04898 Glutamate synthase central domain MRP56_RS08260 PF01493 GXGXG motif MRP56_RS08260 PF00310 Glutamine amidotransferases class-II MRP56_RS08265 PF04055 Radical SAM superfamily MRP56_RS08265 PF16199 Radical_SAM C-terminal domain MRP56_RS08270 PF00664 ABC transporter transmembrane region MRP56_RS08270 PF03412 Peptidase C39 family MRP56_RS08270 PF00005 ABC transporter MRP56_RS08320 PF00324 Amino acid permease MRP56_RS08330 PF03618 Kinase/pyrophosphorylase MRP56_RS08335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MRP56_RS08335 PF02896 PEP-utilising enzyme, TIM barrel domain MRP56_RS08335 PF00391 PEP-utilising enzyme, mobile domain MRP56_RS08345 PF14310 Fibronectin type III-like domain MRP56_RS08345 PF00933 Glycosyl hydrolase family 3 N terminal domain MRP56_RS08345 PF01915 Glycosyl hydrolase family 3 C-terminal domain MRP56_RS08355 PF00082 Subtilase family MRP56_RS08355 PF01483 Proprotein convertase P-domain MRP56_RS08375 PF03180 NLPA lipoprotein MRP56_RS08380 PF01569 PAP2 superfamily MRP56_RS08385 PF11890 Domain of unknown function (DUF3410) MRP56_RS08385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MRP56_RS08385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MRP56_RS08390 PF01118 Semialdehyde dehydrogenase, NAD binding domain MRP56_RS08390 PF02774 Semialdehyde dehydrogenase, dimerisation domain MRP56_RS08400 PF01416 tRNA pseudouridine synthase MRP56_RS08405 PF01039 Carboxyl transferase domain MRP56_RS08405 PF17848 Acetyl-coA carboxylase zinc finger domain MRP56_RS08410 PF02875 Mur ligase family, glutamate ligase domain MRP56_RS08410 PF08245 Mur ligase middle domain MRP56_RS08415 PF05036 Sporulation related domain MRP56_RS08420 PF04358 DsrC like protein MRP56_RS08425 PF12805 FUSC-like inner membrane protein yccS MRP56_RS08430 PF01027 Inhibitor of apoptosis-promoting Bax1 MRP56_RS08450 PF08019 Phosphoethanolamine transferase EptA/EptB MRP56_RS08450 PF00884 Sulfatase MRP56_RS08460 PF03706 Lysylphosphatidylglycerol synthase TM region MRP56_RS08460 PF09924 Uncharacterised conserved protein (DUF2156) MRP56_RS08470 PF08447 PAS fold MRP56_RS08470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS08475 PF13426 PAS domain MRP56_RS08475 PF00563 EAL domain MRP56_RS08475 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS08480 PF00849 RNA pseudouridylate synthase MRP56_RS08490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS08495 PF04209 homogentisate 1,2-dioxygenase MRP56_RS08505 PF14497 Glutathione S-transferase, C-terminal domain MRP56_RS08505 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS08510 PF13417 Glutathione S-transferase, N-terminal domain MRP56_RS08510 PF00043 Glutathione S-transferase, C-terminal domain MRP56_RS08520 PF13537 Glutamine amidotransferase domain MRP56_RS08520 PF00733 Asparagine synthase MRP56_RS08530 PF02254 TrkA-N domain MRP56_RS08530 PF00999 Sodium/hydrogen exchanger family MRP56_RS08535 PF13344 Haloacid dehalogenase-like hydrolase MRP56_RS08540 PF00962 Adenosine/AMP deaminase MRP56_RS08545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MRP56_RS08550 PF03471 Transporter associated domain MRP56_RS08550 PF03741 Integral membrane protein TerC family MRP56_RS08560 PF13183 4Fe-4S dicluster domain MRP56_RS08560 PF02913 FAD linked oxidases, C-terminal domain MRP56_RS08560 PF01565 FAD binding domain MRP56_RS08570 PF03061 Thioesterase superfamily MRP56_RS08575 PF00271 Helicase conserved C-terminal domain MRP56_RS08575 PF00270 DEAD/DEAH box helicase MRP56_RS08575 PF03880 DbpA RNA binding domain MRP56_RS08580 PF13726 Na+-H+ antiporter family MRP56_RS08580 PF03553 Na+/H+ antiporter family MRP56_RS08585 PF00929 Exonuclease MRP56_RS08590 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS08590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS08590 PF00672 HAMP domain MRP56_RS08595 PF18393 MotY N-terminal domain MRP56_RS08595 PF00691 OmpA family MRP56_RS08600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS08605 PF10576 Iron-sulfur binding domain of endonuclease III MRP56_RS08605 PF00633 Helix-hairpin-helix motif MRP56_RS08605 PF00730 HhH-GPD superfamily base excision DNA repair protein MRP56_RS08610 PF02508 Rnf-Nqr subunit, membrane protein MRP56_RS08615 PF04205 FMN-binding domain MRP56_RS08620 PF03116 NQR2, RnfD, RnfE family MRP56_RS08625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MRP56_RS08625 PF12838 4Fe-4S dicluster domain MRP56_RS08625 PF13375 RnfC Barrel sandwich hybrid domain MRP56_RS08625 PF10531 SLBB domain MRP56_RS08630 PF04060 Putative Fe-S cluster MRP56_RS08635 PF02508 Rnf-Nqr subunit, membrane protein MRP56_RS08640 PF00892 EamA-like transporter family MRP56_RS08655 PF12241 Trans-2-enoyl-CoA reductase catalytic region MRP56_RS08655 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MRP56_RS08655 PF07055 Enoyl reductase FAD binding domain MRP56_RS08660 PF03606 C4-dicarboxylate anaerobic carrier MRP56_RS08665 PF00155 Aminotransferase class I and II MRP56_RS08675 PF00462 Glutaredoxin MRP56_RS08680 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MRP56_RS08685 PF00271 Helicase conserved C-terminal domain MRP56_RS08685 PF04851 Type III restriction enzyme, res subunit MRP56_RS08690 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS08690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS08695 PF11742 Protein of unknown function (DUF3302) MRP56_RS08700 PF02554 Carbon starvation protein CstA MRP56_RS08705 PF04397 LytTr DNA-binding domain MRP56_RS08705 PF00072 Response regulator receiver domain MRP56_RS08710 PF06580 Histidine kinase MRP56_RS08710 PF07694 5TMR of 5TMR-LYT MRP56_RS08715 PF01966 HD domain MRP56_RS08720 PF00171 Aldehyde dehydrogenase family MRP56_RS08720 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS08730 PF01914 MarC family integral membrane protein MRP56_RS08735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS08740 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS08745 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS08750 PF00005 ABC transporter MRP56_RS08750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS08755 PF00005 ABC transporter MRP56_RS08755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS08760 PF03741 Integral membrane protein TerC family MRP56_RS08765 PF00842 Alanine racemase, C-terminal domain MRP56_RS08765 PF01168 Alanine racemase, N-terminal domain MRP56_RS08775 PF00375 Sodium:dicarboxylate symporter family MRP56_RS08790 PF01979 Amidohydrolase family MRP56_RS08800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS08800 PF00672 HAMP domain MRP56_RS08805 PF01230 HIT domain MRP56_RS08840 PF07549 SecD/SecF GG Motif MRP56_RS08840 PF13721 SecD export protein N-terminal TM region MRP56_RS08840 PF02355 Protein export membrane protein MRP56_RS08845 PF07549 SecD/SecF GG Motif MRP56_RS08845 PF02355 Protein export membrane protein MRP56_RS08855 PF05661 Protein of unknown function (DUF808) MRP56_RS08860 PF01432 Peptidase family M3 MRP56_RS08860 PF08439 Oligopeptidase F MRP56_RS08865 PF08439 Oligopeptidase F MRP56_RS08865 PF01432 Peptidase family M3 MRP56_RS08870 PF00860 Permease family MRP56_RS08875 PF05728 Uncharacterised protein family (UPF0227) MRP56_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS08900 PF01906 Putative heavy-metal-binding MRP56_RS08910 PF14824 Sirohaem biosynthesis protein central MRP56_RS08910 PF10414 Sirohaem synthase dimerisation region MRP56_RS08910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MRP56_RS08915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MRP56_RS08915 PF13187 4Fe-4S dicluster domain MRP56_RS08915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MRP56_RS08920 PF00175 Oxidoreductase NAD-binding domain MRP56_RS08920 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B MRP56_RS08925 PF17179 4Fe-4S dicluster domain MRP56_RS08930 PF01734 Patatin-like phospholipase MRP56_RS08935 PF17676 LD-carboxypeptidase C-terminal domain MRP56_RS08935 PF02016 LD-carboxypeptidase N-terminal domain MRP56_RS08940 PF00884 Sulfatase MRP56_RS08955 PF00696 Amino acid kinase family MRP56_RS08955 PF01842 ACT domain MRP56_RS08960 PF00696 Amino acid kinase family MRP56_RS08960 PF00583 Acetyltransferase (GNAT) family MRP56_RS08965 PF01625 Peptide methionine sulfoxide reductase MRP56_RS08985 PF00561 alpha/beta hydrolase fold MRP56_RS08990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS09000 PF03466 LysR substrate binding domain MRP56_RS09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS09005 PF02652 L-lactate permease MRP56_RS09010 PF02754 Cysteine-rich domain MRP56_RS09015 PF02589 LUD domain MRP56_RS09015 PF13183 4Fe-4S dicluster domain MRP56_RS09015 PF11870 Domain of unknown function (DUF3390) MRP56_RS09020 PF02589 LUD domain MRP56_RS09025 PF01565 FAD binding domain MRP56_RS09025 PF02913 FAD linked oxidases, C-terminal domain MRP56_RS09045 PF12704 MacB-like periplasmic core domain MRP56_RS09045 PF02687 FtsX-like permease family MRP56_RS09050 PF00005 ABC transporter MRP56_RS09060 PF07690 Major Facilitator Superfamily MRP56_RS09075 PF01593 Flavin containing amine oxidoreductase MRP56_RS09080 PF03239 Iron permease FTR1 family MRP56_RS09095 PF03350 Uncharacterized protein family, UPF0114 MRP56_RS09110 PF00916 Sulfate permease family MRP56_RS09110 PF01740 STAS domain MRP56_RS09130 PF00842 Alanine racemase, C-terminal domain MRP56_RS09130 PF01168 Alanine racemase, N-terminal domain MRP56_RS09135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS09135 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS09135 PF00672 HAMP domain MRP56_RS09140 PF00563 EAL domain MRP56_RS09140 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS09140 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS09145 PF00072 Response regulator receiver domain MRP56_RS09145 PF01339 CheB methylesterase MRP56_RS09150 PF03705 CheR methyltransferase, all-alpha domain MRP56_RS09150 PF01739 CheR methyltransferase, SAM binding domain MRP56_RS09155 PF01584 CheW-like domain MRP56_RS09160 PF17202 Single cache domain 3 MRP56_RS09160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS09160 PF00672 HAMP domain MRP56_RS09165 PF01584 CheW-like domain MRP56_RS09165 PF09078 CheY binding MRP56_RS09165 PF02895 Signal transducing histidine kinase, homodimeric domain MRP56_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS09165 PF01627 Hpt domain MRP56_RS09175 PF00158 Sigma-54 interaction domain MRP56_RS09175 PF02954 Bacterial regulatory protein, Fis family MRP56_RS09175 PF00072 Response regulator receiver domain MRP56_RS09180 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MRP56_RS09180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MRP56_RS09185 PF13247 4Fe-4S dicluster domain MRP56_RS09190 PF03916 Polysulphide reductase, NrfD MRP56_RS09195 PF00374 Nickel-dependent hydrogenase MRP56_RS09200 PF01750 Hydrogenase maturation protease MRP56_RS09205 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MRP56_RS09210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS09215 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS09220 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS09225 PF00005 ABC transporter MRP56_RS09230 PF00005 ABC transporter MRP56_RS09230 PF08402 TOBE domain MRP56_RS09235 PF02492 CobW/HypB/UreG, nucleotide-binding domain MRP56_RS09245 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MRP56_RS09250 PF00586 AIR synthase related protein, N-terminal domain MRP56_RS09250 PF02769 AIR synthase related protein, C-terminal domain MRP56_RS09255 PF01924 Hydrogenase formation hypA family MRP56_RS09260 PF01455 HupF/HypC family MRP56_RS09265 PF00708 Acylphosphatase MRP56_RS09265 PF17788 HypF Kae1-like domain MRP56_RS09265 PF01300 Telomere recombination MRP56_RS09265 PF07503 HypF finger MRP56_RS09270 PF00009 Elongation factor Tu GTP binding domain MRP56_RS09270 PF03144 Elongation factor Tu domain 2 MRP56_RS09270 PF09105 Elongation factor SelB, winged helix MRP56_RS09270 PF09106 Elongation factor SelB, winged helix MRP56_RS09270 PF09107 Elongation factor SelB, winged helix MRP56_RS09275 PF12390 Selenocysteine synthase N terminal MRP56_RS09275 PF03841 L-seryl-tRNA selenium transferase MRP56_RS09285 PF01750 Hydrogenase maturation protease MRP56_RS09290 PF07450 Formate hydrogenlyase maturation protein HycH MRP56_RS09295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MRP56_RS09300 PF12838 4Fe-4S dicluster domain MRP56_RS09305 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MRP56_RS09305 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MRP56_RS09305 PF00374 Nickel-dependent hydrogenase MRP56_RS09310 PF00146 NADH dehydrogenase MRP56_RS09315 PF00361 Proton-conducting membrane transporter MRP56_RS09320 PF12798 4Fe-4S binding domain MRP56_RS09320 PF00037 4Fe-4S binding domain MRP56_RS09325 PF02705 K+ potassium transporter MRP56_RS09335 PF12800 4Fe-4S binding domain MRP56_RS09335 PF13247 4Fe-4S dicluster domain MRP56_RS09350 PF00158 Sigma-54 interaction domain MRP56_RS09350 PF01590 GAF domain MRP56_RS09350 PF02954 Bacterial regulatory protein, Fis family MRP56_RS09355 PF02634 FdhD/NarQ family MRP56_RS09360 PF02132 RecR protein MRP56_RS09360 PF13662 Toprim domain MRP56_RS09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS09365 PF00183 Hsp90 protein MRP56_RS09370 PF05191 Adenylate kinase, active site lid MRP56_RS09375 PF00762 Ferrochelatase MRP56_RS09385 PF00294 pfkB family carbohydrate kinase MRP56_RS09400 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS09400 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS09400 PF00563 EAL domain MRP56_RS09405 PF00483 Nucleotidyl transferase MRP56_RS09415 PF07273 Protein of unknown function (DUF1439) MRP56_RS09420 PF00425 chorismate binding enzyme MRP56_RS09425 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS09425 PF00501 AMP-binding enzyme MRP56_RS09430 PF00857 Isochorismatase family MRP56_RS09430 PF00550 Phosphopantetheine attachment site MRP56_RS09435 PF00975 Thioesterase domain MRP56_RS09435 PF00550 Phosphopantetheine attachment site MRP56_RS09435 PF00668 Condensation domain MRP56_RS09435 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS09435 PF00501 AMP-binding enzyme MRP56_RS09445 PF00501 AMP-binding enzyme MRP56_RS09445 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS09445 PF00668 Condensation domain MRP56_RS09445 PF00550 Phosphopantetheine attachment site MRP56_RS09445 PF07993 Male sterility protein MRP56_RS09450 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS09450 PF00975 Thioesterase domain MRP56_RS09450 PF00550 Phosphopantetheine attachment site MRP56_RS09450 PF00501 AMP-binding enzyme MRP56_RS09450 PF00668 Condensation domain MRP56_RS09455 PF01497 Periplasmic binding protein MRP56_RS09460 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MRP56_RS09460 PF01648 4'-phosphopantetheinyl transferase superfamily MRP56_RS09465 PF00005 ABC transporter MRP56_RS09470 PF01032 FecCD transport family MRP56_RS09475 PF01032 FecCD transport family MRP56_RS09480 PF00593 TonB dependent receptor MRP56_RS09480 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS09495 PF11143 Protein of unknown function (DUF2919) MRP56_RS09500 PF01544 CorA-like Mg2+ transporter protein MRP56_RS09510 PF01012 Electron transfer flavoprotein domain MRP56_RS09515 PF00766 Electron transfer flavoprotein FAD-binding domain MRP56_RS09515 PF01012 Electron transfer flavoprotein domain MRP56_RS09520 PF00266 Aminotransferase class-V MRP56_RS09525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MRP56_RS09530 PF00793 DAHP synthetase I family MRP56_RS09535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS09535 PF00672 HAMP domain MRP56_RS09540 PF04055 Radical SAM superfamily MRP56_RS09545 PF02601 Exonuclease VII, large subunit MRP56_RS09545 PF13742 OB-fold nucleic acid binding domain MRP56_RS09550 PF00892 EamA-like transporter family MRP56_RS09555 PF02472 Biopolymer transport protein ExbD/TolR MRP56_RS09560 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS09570 PF02705 K+ potassium transporter MRP56_RS09575 PF00478 IMP dehydrogenase / GMP reductase domain MRP56_RS09575 PF00571 CBS domain MRP56_RS09580 PF00117 Glutamine amidotransferase class-I MRP56_RS09580 PF00958 GMP synthase C terminal domain MRP56_RS09580 PF02540 NAD synthase MRP56_RS09600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MRP56_RS09600 PF02805 Metal binding domain of Ada MRP56_RS09600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MRP56_RS09600 PF12833 Helix-turn-helix domain MRP56_RS09615 PF05724 Thiopurine S-methyltransferase (TPMT) MRP56_RS09620 PF05193 Peptidase M16 inactive domain MRP56_RS09620 PF00675 Insulinase (Peptidase family M16) MRP56_RS09625 PF00300 Histidine phosphatase superfamily (branch 1) MRP56_RS09635 PF00892 EamA-like transporter family MRP56_RS09640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS09645 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MRP56_RS09650 PF02559 CarD-like/TRCF domain MRP56_RS09650 PF00271 Helicase conserved C-terminal domain MRP56_RS09650 PF17757 UvrB interaction domain MRP56_RS09650 PF03461 TRCF domain MRP56_RS09650 PF00270 DEAD/DEAH box helicase MRP56_RS09660 PF02687 FtsX-like permease family MRP56_RS09660 PF12704 MacB-like periplasmic core domain MRP56_RS09665 PF00005 ABC transporter MRP56_RS09670 PF12704 MacB-like periplasmic core domain MRP56_RS09670 PF02687 FtsX-like permease family MRP56_RS09685 PF05698 Bacterial trigger factor protein (TF) C-terminus MRP56_RS09685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS09685 PF05697 Bacterial trigger factor protein (TF) MRP56_RS09690 PF00574 Clp protease MRP56_RS09695 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS09695 PF06689 ClpX C4-type zinc finger MRP56_RS09695 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS09700 PF02190 ATP-dependent protease La (LON) substrate-binding domain MRP56_RS09700 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS09700 PF05362 Lon protease (S16) C-terminal proteolytic domain MRP56_RS09705 PF00216 Bacterial DNA-binding protein MRP56_RS09710 PF13145 PPIC-type PPIASE domain MRP56_RS09715 PF00005 ABC transporter MRP56_RS09715 PF12848 ABC transporter MRP56_RS09720 PF00474 Sodium:solute symporter family MRP56_RS09725 PF04341 Protein of unknown function, DUF485 MRP56_RS09740 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS09745 PF01235 Sodium:alanine symporter family MRP56_RS09755 PF06167 Glucose-regulated metallo-peptidase M90 MRP56_RS09760 PF01184 GPR1/FUN34/yaaH family MRP56_RS09775 PF00376 MerR family regulatory protein MRP56_RS09775 PF09278 MerR, DNA binding MRP56_RS09780 PF00682 HMGL-like MRP56_RS09785 PF02785 Biotin carboxylase C-terminal domain MRP56_RS09785 PF00364 Biotin-requiring enzyme MRP56_RS09785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MRP56_RS09785 PF00289 Biotin carboxylase, N-terminal domain MRP56_RS09790 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS09795 PF01039 Carboxyl transferase domain MRP56_RS09800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MRP56_RS09800 PF02770 Acyl-CoA dehydrogenase, middle domain MRP56_RS09800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MRP56_RS09805 PF00171 Aldehyde dehydrogenase family MRP56_RS09810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MRP56_RS09810 PF02770 Acyl-CoA dehydrogenase, middle domain MRP56_RS09810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MRP56_RS09815 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS09820 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS09825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MRP56_RS09825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MRP56_RS09835 PF13520 Amino acid permease MRP56_RS09840 PF01925 Sulfite exporter TauE/SafE MRP56_RS09850 PF14659 Phage integrase, N-terminal SAM-like domain MRP56_RS09850 PF00589 Phage integrase family MRP56_RS09865 PF02384 N-6 DNA Methylase MRP56_RS09890 PF04002 RadC-like JAB domain MRP56_RS09905 PF02796 Helix-turn-helix domain of resolvase MRP56_RS09905 PF00239 Resolvase, N terminal domain MRP56_RS09925 PF03466 LysR substrate binding domain MRP56_RS09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS09935 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS09935 PF13188 PAS domain MRP56_RS09935 PF00563 EAL domain MRP56_RS09935 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS09940 PF03466 LysR substrate binding domain MRP56_RS09945 PF00232 Glycosyl hydrolase family 1 MRP56_RS09950 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS09950 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS09950 PF00563 EAL domain MRP56_RS09950 PF13188 PAS domain MRP56_RS09960 PF01966 HD domain MRP56_RS09970 PF03466 LysR substrate binding domain MRP56_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS09975 PF01261 Xylose isomerase-like TIM barrel MRP56_RS09980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MRP56_RS09980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MRP56_RS09985 PF03466 LysR substrate binding domain MRP56_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS09995 PF03279 Bacterial lipid A biosynthesis acyltransferase MRP56_RS10000 PF03279 Bacterial lipid A biosynthesis acyltransferase MRP56_RS10015 PF17151 Periplasmic sensor domain MRP56_RS10015 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS10025 PF00136 DNA polymerase family B MRP56_RS10025 PF03104 DNA polymerase family B, exonuclease domain MRP56_RS10055 PF01554 MatE MRP56_RS10060 PF06786 Uncharacterised protein family (UPF0253) MRP56_RS10065 PF00677 Lumazine binding domain MRP56_RS10075 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS10080 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS10080 PF02222 ATP-grasp domain MRP56_RS10085 PF00892 EamA-like transporter family MRP56_RS10090 PF02525 Flavodoxin-like fold MRP56_RS10115 PF13509 S1 domain MRP56_RS10115 PF17783 CvfB-like winged helix domain MRP56_RS10125 PF04269 Protein of unknown function, DUF440 MRP56_RS10130 PF00912 Transglycosylase MRP56_RS10135 PF04269 Protein of unknown function, DUF440 MRP56_RS10140 PF03776 Septum formation topological specificity factor MinE MRP56_RS10145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MRP56_RS10150 PF03775 Septum formation inhibitor MinC, C-terminal domain MRP56_RS10150 PF05209 Septum formation inhibitor MinC, N-terminal domain MRP56_RS10155 PF05166 YcgL domain MRP56_RS10160 PF13406 Transglycosylase SLT domain MRP56_RS10165 PF03313 Serine dehydratase alpha chain MRP56_RS10165 PF03315 Serine dehydratase beta chain MRP56_RS10170 PF03313 Serine dehydratase alpha chain MRP56_RS10170 PF03315 Serine dehydratase beta chain MRP56_RS10175 PF06865 Pyrimidine/purine nucleoside phosphorylase MRP56_RS10180 PF00375 Sodium:dicarboxylate symporter family MRP56_RS10185 PF00376 MerR family regulatory protein MRP56_RS10185 PF09278 MerR, DNA binding MRP56_RS10190 PF00108 Thiolase, N-terminal domain MRP56_RS10190 PF02803 Thiolase, C-terminal domain MRP56_RS10195 PF08668 HDOD domain MRP56_RS10195 PF00563 EAL domain MRP56_RS10200 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MRP56_RS10205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MRP56_RS10215 PF04542 Sigma-70 region 2 MRP56_RS10215 PF08281 Sigma-70, region 4 MRP56_RS10240 PF01882 Protein of unknown function DUF58 MRP56_RS10245 PF17863 AAA lid domain MRP56_RS10245 PF07726 ATPase family associated with various cellular activities (AAA) MRP56_RS10250 PF00108 Thiolase, N-terminal domain MRP56_RS10250 PF02803 Thiolase, C-terminal domain MRP56_RS10255 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS10255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MRP56_RS10255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MRP56_RS10265 PF07152 YaeQ protein MRP56_RS10275 PF02954 Bacterial regulatory protein, Fis family MRP56_RS10275 PF13188 PAS domain MRP56_RS10275 PF00158 Sigma-54 interaction domain MRP56_RS10280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MRP56_RS10280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MRP56_RS10285 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS10290 PF01546 Peptidase family M20/M25/M40 MRP56_RS10290 PF07687 Peptidase dimerisation domain MRP56_RS10295 PF01979 Amidohydrolase family MRP56_RS10300 PF00696 Amino acid kinase family MRP56_RS10305 PF00892 EamA-like transporter family MRP56_RS10310 PF13478 XdhC Rossmann domain MRP56_RS10310 PF02625 XdhC and CoxI family MRP56_RS10320 PF12804 MobA-like NTP transferase domain MRP56_RS10325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MRP56_RS10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS10330 PF01979 Amidohydrolase family MRP56_RS10335 PF00941 FAD binding domain in molybdopterin dehydrogenase MRP56_RS10340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MRP56_RS10340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MRP56_RS10340 PF01799 [2Fe-2S] binding domain MRP56_RS10345 PF00860 Permease family MRP56_RS10350 PF01979 Amidohydrolase family MRP56_RS10355 PF00860 Permease family MRP56_RS10360 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MRP56_RS10360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MRP56_RS10365 PF03450 CO dehydrogenase flavoprotein C-terminal domain MRP56_RS10365 PF00941 FAD binding domain in molybdopterin dehydrogenase MRP56_RS10370 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS10370 PF01799 [2Fe-2S] binding domain MRP56_RS10380 PF05433 Glycine zipper 2TM domain MRP56_RS10390 PF03606 C4-dicarboxylate anaerobic carrier MRP56_RS10395 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS10395 PF00501 AMP-binding enzyme MRP56_RS10400 PF01502 Phosphoribosyl-AMP cyclohydrolase MRP56_RS10400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MRP56_RS10405 PF00977 Histidine biosynthesis protein MRP56_RS10410 PF00072 Response regulator receiver domain MRP56_RS10410 PF01627 Hpt domain MRP56_RS10410 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS10415 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS10415 PF08448 PAS fold MRP56_RS10420 PF00072 Response regulator receiver domain MRP56_RS10425 PF00977 Histidine biosynthesis protein MRP56_RS10430 PF00117 Glutamine amidotransferase class-I MRP56_RS10435 PF00475 Imidazoleglycerol-phosphate dehydratase MRP56_RS10435 PF08645 Polynucleotide kinase 3 phosphatase MRP56_RS10440 PF00155 Aminotransferase class I and II MRP56_RS10445 PF00815 Histidinol dehydrogenase MRP56_RS10450 PF08029 HisG, C-terminal domain MRP56_RS10450 PF01634 ATP phosphoribosyltransferase MRP56_RS10460 PF13307 Helicase C-terminal domain MRP56_RS10460 PF04851 Type III restriction enzyme, res subunit MRP56_RS10465 PF00814 Glycoprotease family MRP56_RS10475 PF12697 Alpha/beta hydrolase family MRP56_RS10475 PF08241 Methyltransferase domain MRP56_RS10480 PF00501 AMP-binding enzyme MRP56_RS10480 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS10485 PF01612 3'-5' exonuclease MRP56_RS10485 PF00570 HRDC domain MRP56_RS10490 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS10500 PF01207 Dihydrouridine synthase (Dus) MRP56_RS10505 PF04304 Protein of unknown function (DUF454) MRP56_RS10510 PF00156 Phosphoribosyl transferase domain MRP56_RS10515 PF12170 DNA polymerase III tau subunit V interacting with alpha MRP56_RS10515 PF12169 DNA polymerase III subunits gamma and tau domain III MRP56_RS10515 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MRP56_RS10520 PF02575 YbaB/EbfC DNA-binding family MRP56_RS10535 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS10535 PF00072 Response regulator receiver domain MRP56_RS10540 PF00571 CBS domain MRP56_RS10540 PF01368 DHH family MRP56_RS10540 PF02272 DHHA1 domain MRP56_RS10540 PF01743 Poly A polymerase head domain MRP56_RS10545 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MRP56_RS10545 PF00271 Helicase conserved C-terminal domain MRP56_RS10545 PF00270 DEAD/DEAH box helicase MRP56_RS10545 PF04408 Helicase associated domain (HA2) MRP56_RS10545 PF11898 Domain of unknown function (DUF3418) MRP56_RS10555 PF01386 Ribosomal L25p family MRP56_RS10560 PF00672 HAMP domain MRP56_RS10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS10560 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS10560 PF01627 Hpt domain MRP56_RS10560 PF00072 Response regulator receiver domain MRP56_RS10560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MRP56_RS10565 PF00072 Response regulator receiver domain MRP56_RS10570 PF00753 Metallo-beta-lactamase superfamily MRP56_RS10580 PF00586 AIR synthase related protein, N-terminal domain MRP56_RS10580 PF02769 AIR synthase related protein, C-terminal domain MRP56_RS10595 PF17785 PUA-like domain MRP56_RS10595 PF10672 S-adenosylmethionine-dependent methyltransferase MRP56_RS10600 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS10600 PF00672 HAMP domain MRP56_RS10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS10605 PF00708 Acylphosphatase MRP56_RS10610 PF00043 Glutathione S-transferase, C-terminal domain MRP56_RS10610 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS10615 PF01588 Putative tRNA binding domain MRP56_RS10615 PF09334 tRNA synthetases class I (M) MRP56_RS10615 PF08264 Anticodon-binding domain of tRNA MRP56_RS10620 PF10609 NUBPL iron-transfer P-loop NTPase MRP56_RS10625 PF00485 Phosphoribulokinase / Uridine kinase family MRP56_RS10630 PF00692 dUTPase MRP56_RS10635 PF01384 Phosphate transporter family MRP56_RS10640 PF09278 MerR, DNA binding MRP56_RS10640 PF00376 MerR family regulatory protein MRP56_RS10645 PF02411 MerT mercuric transport protein MRP56_RS10650 PF00403 Heavy-metal-associated domain MRP56_RS10655 PF03203 MerC mercury resistance protein MRP56_RS10660 PF00403 Heavy-metal-associated domain MRP56_RS10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS10660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS10665 PF13411 MerR HTH family regulatory protein MRP56_RS10670 PF05052 MerE protein MRP56_RS10675 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS10675 PF13188 PAS domain MRP56_RS10675 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS10675 PF00563 EAL domain MRP56_RS10685 PF13610 DDE domain MRP56_RS10690 PF01636 Phosphotransferase enzyme family MRP56_RS10720 PF13610 DDE domain MRP56_RS10725 PF01636 Phosphotransferase enzyme family MRP56_RS10740 PF13610 DDE domain MRP56_RS10745 PF03551 Transcriptional regulator PadR-like family MRP56_RS10760 PF00809 Pterin binding enzyme MRP56_RS10765 PF00893 Small Multidrug Resistance protein MRP56_RS10780 PF00186 Dihydrofolate reductase MRP56_RS10785 PF00589 Phage integrase family MRP56_RS10785 PF13495 Phage integrase, N-terminal SAM-like domain MRP56_RS10790 PF13610 DDE domain MRP56_RS10795 PF02522 Aminoglycoside 3-N-acetyltransferase MRP56_RS10830 PF13276 HTH-like domain MRP56_RS10830 PF01527 Transposase MRP56_RS10830 PF00665 Integrase core domain MRP56_RS10830 PF13333 Integrase core domain MRP56_RS10845 PF16653 Saccharopine dehydrogenase C-terminal domain MRP56_RS10845 PF03435 Saccharopine dehydrogenase NADP binding domain MRP56_RS10850 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS10875 PF00809 Pterin binding enzyme MRP56_RS10880 PF00893 Small Multidrug Resistance protein MRP56_RS10890 PF13495 Phage integrase, N-terminal SAM-like domain MRP56_RS10890 PF00589 Phage integrase family MRP56_RS10900 PF11809 Domain of unknown function (DUF3330) MRP56_RS10900 PF00563 EAL domain MRP56_RS10905 PF02796 Helix-turn-helix domain of resolvase MRP56_RS10905 PF00239 Resolvase, N terminal domain MRP56_RS10910 PF13700 Domain of unknown function (DUF4158) MRP56_RS10910 PF01526 Tn3 transposase DDE domain MRP56_RS10920 PF02909 Tetracyclin repressor-like, C-terminal domain MRP56_RS10920 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS10925 PF07690 Major Facilitator Superfamily MRP56_RS10930 PF00892 EamA-like transporter family MRP56_RS10945 PF00575 S1 RNA binding domain MRP56_RS10945 PF12111 Polyribonucleotide phosphorylase C terminal MRP56_RS10945 PF10150 Ribonuclease E/G family MRP56_RS10950 PF00849 RNA pseudouridylate synthase MRP56_RS10950 PF01479 S4 domain MRP56_RS10955 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS10960 PF02545 Maf-like protein MRP56_RS10965 PF07690 Major Facilitator Superfamily MRP56_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS10970 PF03466 LysR substrate binding domain MRP56_RS10980 PF02620 Large ribosomal RNA subunit accumulation protein YceD MRP56_RS10985 PF01783 Ribosomal L32p protein family MRP56_RS10990 PF02504 Fatty acid synthesis protein MRP56_RS10995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MRP56_RS10995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MRP56_RS11000 PF00698 Acyl transferase domain MRP56_RS11010 PF00550 Phosphopantetheine attachment site MRP56_RS11015 PF00109 Beta-ketoacyl synthase, N-terminal domain MRP56_RS11015 PF02801 Beta-ketoacyl synthase, C-terminal domain MRP56_RS11020 PF01063 Amino-transferase class IV MRP56_RS11025 PF02618 YceG-like family MRP56_RS11030 PF02223 Thymidylate kinase MRP56_RS11035 PF09115 DNA polymerase III, delta subunit, C terminal MRP56_RS11040 PF01026 TatD related DNase MRP56_RS11045 PF00589 Phage integrase family MRP56_RS11055 PF01189 16S rRNA methyltransferase RsmB/F MRP56_RS11055 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MRP56_RS11055 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MRP56_RS11060 PF02470 MlaD protein MRP56_RS11065 PF04403 Paraquat-inducible protein A MRP56_RS11080 PF00285 Citrate synthase, C-terminal domain MRP56_RS11085 PF03972 MmgE/PrpD family MRP56_RS11100 PF06974 Protein of unknown function (DUF1298) MRP56_RS11100 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MRP56_RS11125 PF00106 short chain dehydrogenase MRP56_RS11135 PF07130 YebG protein MRP56_RS11195 PF13654 AAA domain MRP56_RS11195 PF05362 Lon protease (S16) C-terminal proteolytic domain MRP56_RS11200 PF07977 FabA-like domain MRP56_RS11205 PF04957 Ribosome modulation factor MRP56_RS11215 PF16326 ABC transporter C-terminal domain MRP56_RS11215 PF12848 ABC transporter MRP56_RS11215 PF00005 ABC transporter MRP56_RS11225 PF10672 S-adenosylmethionine-dependent methyltransferase MRP56_RS11225 PF02926 THUMP domain MRP56_RS11225 PF01170 Putative RNA methylase family UPF0020 MRP56_RS11230 PF07126 Cell-division protein ZapC MRP56_RS11235 PF01180 Dihydroorotate dehydrogenase MRP56_RS11240 PF05088 Bacterial NAD-glutamate dehydrogenase MRP56_RS11250 PF11940 Domain of unknown function (DUF3458) Ig-like fold MRP56_RS11250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MRP56_RS11250 PF01433 Peptidase family M1 domain MRP56_RS11255 PF00595 PDZ domain MRP56_RS11255 PF11818 C-terminal domain of tail specific protease (DUF3340) MRP56_RS11255 PF03572 Peptidase family S41 MRP56_RS11255 PF17804 Tail specific protease N-terminal domain MRP56_RS11260 PF17516 ProQ C-terminal domain MRP56_RS11260 PF04352 ProQ/FINO family MRP56_RS11265 PF13185 GAF domain MRP56_RS11275 PF00115 Cytochrome C and Quinol oxidase polypeptide I MRP56_RS11290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MRP56_RS11290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MRP56_RS11300 PF00403 Heavy-metal-associated domain MRP56_RS11315 PF13545 Crp-like helix-turn-helix domain MRP56_RS11315 PF00027 Cyclic nucleotide-binding domain MRP56_RS11320 PF00582 Universal stress protein family MRP56_RS11325 PF01171 PP-loop family MRP56_RS11340 PF00043 Glutathione S-transferase, C-terminal domain MRP56_RS11340 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS11345 PF05025 RbsD / FucU transport protein family MRP56_RS11350 PF00005 ABC transporter MRP56_RS11355 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS11360 PF13407 Periplasmic binding protein domain MRP56_RS11365 PF00294 pfkB family carbohydrate kinase MRP56_RS11370 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS11375 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS11375 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS11375 PF00563 EAL domain MRP56_RS11385 PF02146 Sir2 family MRP56_RS11400 PF09456 RcsC Alpha-Beta-Loop (ABL) MRP56_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS11400 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS11400 PF00072 Response regulator receiver domain MRP56_RS11405 PF00216 Bacterial DNA-binding protein MRP56_RS11410 PF03484 tRNA synthetase B5 domain MRP56_RS11410 PF03147 Ferredoxin-fold anticodon binding domain MRP56_RS11410 PF03483 B3/4 domain MRP56_RS11410 PF01588 Putative tRNA binding domain MRP56_RS11410 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MRP56_RS11415 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MRP56_RS11415 PF01409 tRNA synthetases class II core domain (F) MRP56_RS11420 PF00453 Ribosomal protein L20 MRP56_RS11425 PF01632 Ribosomal protein L35 MRP56_RS11430 PF05198 Translation initiation factor IF-3, N-terminal domain MRP56_RS11430 PF00707 Translation initiation factor IF-3, C-terminal domain MRP56_RS11435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MRP56_RS11435 PF02824 TGS domain MRP56_RS11435 PF03129 Anticodon binding domain MRP56_RS11435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MRP56_RS11445 PF04055 Radical SAM superfamily MRP56_RS11455 PF03989 DNA gyrase C-terminal domain, beta-propeller MRP56_RS11455 PF00521 DNA gyrase/topoisomerase IV, subunit A MRP56_RS11465 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS11470 PF02867 Ribonucleotide reductase, barrel domain MRP56_RS11470 PF00317 Ribonucleotide reductase, all-alpha domain MRP56_RS11470 PF03477 ATP cone domain MRP56_RS11475 PF00268 Ribonucleotide reductase, small chain MRP56_RS11480 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS11485 PF03562 MltA specific insert domain MRP56_RS11485 PF06725 3D domain MRP56_RS11490 PF06945 Protein of unknown function (DUF1289) MRP56_RS11500 PF03613 PTS system mannose/fructose/sorbose family IID component MRP56_RS11505 PF03609 PTS system sorbose-specific iic component MRP56_RS11510 PF03610 PTS system fructose IIA component MRP56_RS11510 PF03830 PTS system sorbose subfamily IIB component MRP56_RS11525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS11525 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS11530 PF06560 Glucose-6-phosphate isomerase (GPI) MRP56_RS11535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MRP56_RS11535 PF02378 Phosphotransferase system, EIIC MRP56_RS11540 PF00294 pfkB family carbohydrate kinase MRP56_RS11545 PF00381 PTS HPr component phosphorylation site MRP56_RS11545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS11550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS11550 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS11555 PF03222 Tryptophan/tyrosine permease family MRP56_RS11570 PF00270 DEAD/DEAH box helicase MRP56_RS11570 PF00271 Helicase conserved C-terminal domain MRP56_RS11580 PF01264 Chorismate synthase MRP56_RS11585 PF05175 Methyltransferase small domain MRP56_RS11590 PF01713 Smr domain MRP56_RS11600 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS11600 PF08448 PAS fold MRP56_RS11605 PF00300 Histidine phosphatase superfamily (branch 1) MRP56_RS11620 PF08329 Chitinase A, N-terminal domain MRP56_RS11620 PF00704 Glycosyl hydrolases family 18 MRP56_RS11630 PF03831 PhnA domain MRP56_RS11630 PF08274 PhnA Zinc-Ribbon MRP56_RS11640 PF02567 Phenazine biosynthesis-like protein MRP56_RS11670 PF01327 Polypeptide deformylase MRP56_RS11685 PF03330 Lytic transglycolase MRP56_RS11685 PF05036 Sporulation related domain MRP56_RS11690 PF16330 MukB hinge domain MRP56_RS11690 PF04310 MukB N-terminal MRP56_RS11695 PF04288 MukE-like family MRP56_RS11700 PF17192 MukF middle domain MRP56_RS11700 PF17193 MukF C-terminal domain MRP56_RS11700 PF03882 MukF winged-helix domain MRP56_RS11705 PF13847 Methyltransferase domain MRP56_RS11710 PF02698 DUF218 domain MRP56_RS11715 PF00121 Triosephosphate isomerase MRP56_RS11720 PF00365 Phosphofructokinase MRP56_RS11725 PF07687 Peptidase dimerisation domain MRP56_RS11725 PF01546 Peptidase family M20/M25/M40 MRP56_RS11730 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS11735 PF02789 Cytosol aminopeptidase family, N-terminal domain MRP56_RS11735 PF00883 Cytosol aminopeptidase family, catalytic domain MRP56_RS11775 PF00128 Alpha amylase, catalytic domain MRP56_RS11775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MRP56_RS11785 PF11398 Protein of unknown function (DUF2813) MRP56_RS11790 PF12833 Helix-turn-helix domain MRP56_RS11790 PF14525 AraC-binding-like domain MRP56_RS11800 PF03466 LysR substrate binding domain MRP56_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS11805 PF01925 Sulfite exporter TauE/SafE MRP56_RS11810 PF03942 DTW domain MRP56_RS11815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS11815 PF18029 Glyoxalase-like domain MRP56_RS11820 PF07478 D-ala D-ala ligase C-terminus MRP56_RS11820 PF01820 D-ala D-ala ligase N-terminus MRP56_RS11830 PF00255 Glutathione peroxidase MRP56_RS11835 PF00270 DEAD/DEAH box helicase MRP56_RS11835 PF00271 Helicase conserved C-terminal domain MRP56_RS11840 PF13673 Acetyltransferase (GNAT) domain MRP56_RS11850 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MRP56_RS11860 PF01928 CYTH domain MRP56_RS11870 PF00583 Acetyltransferase (GNAT) family MRP56_RS11875 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS11880 PF03992 Antibiotic biosynthesis monooxygenase MRP56_RS11885 PF08543 Phosphomethylpyrimidine kinase MRP56_RS11905 PF00561 alpha/beta hydrolase fold MRP56_RS11905 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MRP56_RS11910 PF01575 MaoC like domain MRP56_RS11930 PF00005 ABC transporter MRP56_RS11930 PF00664 ABC transporter transmembrane region MRP56_RS11935 PF00005 ABC transporter MRP56_RS11935 PF00664 ABC transporter transmembrane region MRP56_RS11940 PF00672 HAMP domain MRP56_RS11940 PF00072 Response regulator receiver domain MRP56_RS11940 PF01627 Hpt domain MRP56_RS11940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS11940 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS11940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MRP56_RS11945 PF00085 Thioredoxin MRP56_RS11950 PF00939 Sodium:sulfate symporter transmembrane region MRP56_RS11955 PF00343 Carbohydrate phosphorylase MRP56_RS11975 PF00425 chorismate binding enzyme MRP56_RS11975 PF04715 Anthranilate synthase component I, N terminal region MRP56_RS11980 PF00293 NUDIX domain MRP56_RS11985 PF03222 Tryptophan/tyrosine permease family MRP56_RS11990 PF00375 Sodium:dicarboxylate symporter family MRP56_RS11995 PF16124 RecQ zinc-binding MRP56_RS11995 PF00570 HRDC domain MRP56_RS11995 PF00271 Helicase conserved C-terminal domain MRP56_RS11995 PF00270 DEAD/DEAH box helicase MRP56_RS11995 PF09382 RQC domain MRP56_RS12000 PF08298 PrkA AAA domain MRP56_RS12000 PF06798 PrkA serine protein kinase C-terminal domain MRP56_RS12005 PF04285 Protein of unknown function (DUF444) MRP56_RS12010 PF04293 SpoVR like protein MRP56_RS12015 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS12015 PF07840 FadR C-terminal domain MRP56_RS12020 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MRP56_RS12025 PF02600 Disulfide bond formation protein DsbB MRP56_RS12030 PF09335 SNARE associated Golgi protein MRP56_RS12040 PF12344 Ultra-violet resistance protein B MRP56_RS12040 PF02151 UvrB/uvrC motif MRP56_RS12040 PF04851 Type III restriction enzyme, res subunit MRP56_RS12040 PF00271 Helicase conserved C-terminal domain MRP56_RS12040 PF17757 UvrB interaction domain MRP56_RS12050 PF06826 Predicted Permease Membrane Region MRP56_RS12050 PF02080 TrkA-C domain MRP56_RS12070 PF01970 Tripartite tricarboxylate transporter TctA family MRP56_RS12075 PF12431 Transcriptional regulator MRP56_RS12075 PF08279 HTH domain MRP56_RS12075 PF00072 Response regulator receiver domain MRP56_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS12080 PF00989 PAS fold MRP56_RS12080 PF17203 Single cache domain 3 MRP56_RS12080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MRP56_RS12085 PF00480 ROK family MRP56_RS12085 PF01047 MarR family MRP56_RS12090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS12090 PF17200 Single Cache domain 2 MRP56_RS12090 PF00672 HAMP domain MRP56_RS12095 PF02810 SEC-C motif MRP56_RS12100 PF04324 BFD-like [2Fe-2S] binding domain MRP56_RS12100 PF01266 FAD dependent oxidoreductase MRP56_RS12105 PF00890 FAD binding domain MRP56_RS12110 PF13183 4Fe-4S dicluster domain MRP56_RS12110 PF02754 Cysteine-rich domain MRP56_RS12125 PF02335 Cytochrome c552 MRP56_RS12130 PF13435 Cytochrome c554 and c-prime MRP56_RS12130 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MRP56_RS12135 PF00037 4Fe-4S binding domain MRP56_RS12135 PF13247 4Fe-4S dicluster domain MRP56_RS12140 PF03916 Polysulphide reductase, NrfD MRP56_RS12145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MRP56_RS12145 PF01578 Cytochrome C assembly protein MRP56_RS12150 PF08534 Redoxin MRP56_RS12155 PF03918 Cytochrome C biogenesis protein MRP56_RS12160 PF00293 NUDIX domain MRP56_RS12165 PF00768 D-alanyl-D-alanine carboxypeptidase MRP56_RS12180 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MRP56_RS12185 PF01266 FAD dependent oxidoreductase MRP56_RS12195 PF07969 Amidohydrolase family MRP56_RS12200 PF00478 IMP dehydrogenase / GMP reductase domain MRP56_RS12200 PF00571 CBS domain MRP56_RS12210 PF08267 Cobalamin-independent synthase, N-terminal domain MRP56_RS12210 PF01717 Cobalamin-independent synthase, Catalytic domain MRP56_RS12215 PF03466 LysR substrate binding domain MRP56_RS12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS12225 PF00593 TonB dependent receptor MRP56_RS12225 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS12230 PF12833 Helix-turn-helix domain MRP56_RS12235 PF00106 short chain dehydrogenase MRP56_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS12240 PF03466 LysR substrate binding domain MRP56_RS12245 PF13460 NAD(P)H-binding MRP56_RS12255 PF01053 Cys/Met metabolism PLP-dependent enzyme MRP56_RS12260 PF05193 Peptidase M16 inactive domain MRP56_RS12260 PF00675 Insulinase (Peptidase family M16) MRP56_RS12265 PF02774 Semialdehyde dehydrogenase, dimerisation domain MRP56_RS12265 PF01118 Semialdehyde dehydrogenase, NAD binding domain MRP56_RS12270 PF00893 Small Multidrug Resistance protein MRP56_RS12275 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MRP56_RS12275 PF18381 YcaO cyclodehydratase C-terminal domain MRP56_RS12280 PF01226 Formate/nitrite transporter MRP56_RS12285 PF02901 Pyruvate formate lyase-like MRP56_RS12285 PF01228 Glycine radical MRP56_RS12295 PF00202 Aminotransferase class-III MRP56_RS12300 PF00266 Aminotransferase class-V MRP56_RS12305 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS12305 PF07702 UTRA domain MRP56_RS12315 PF00005 ABC transporter MRP56_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS12325 PF01266 FAD dependent oxidoreductase MRP56_RS12330 PF03692 Putative zinc- or iron-chelating domain MRP56_RS12340 PF00549 CoA-ligase MRP56_RS12340 PF02629 CoA binding domain MRP56_RS12345 PF00549 CoA-ligase MRP56_RS12345 PF08442 ATP-grasp domain MRP56_RS12350 PF00364 Biotin-requiring enzyme MRP56_RS12350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MRP56_RS12350 PF02817 e3 binding domain MRP56_RS12355 PF16078 2-oxoglutarate dehydrogenase N-terminus MRP56_RS12355 PF00676 Dehydrogenase E1 component MRP56_RS12355 PF16870 2-oxoglutarate dehydrogenase C-terminal MRP56_RS12355 PF02779 Transketolase, pyrimidine binding domain MRP56_RS12360 PF13085 2Fe-2S iron-sulfur cluster binding domain MRP56_RS12365 PF00890 FAD binding domain MRP56_RS12365 PF02910 Fumarate reductase flavoprotein C-term MRP56_RS12370 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MRP56_RS12375 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MRP56_RS12380 PF00285 Citrate synthase, C-terminal domain MRP56_RS12395 PF02801 Beta-ketoacyl synthase, C-terminal domain MRP56_RS12395 PF00109 Beta-ketoacyl synthase, N-terminal domain MRP56_RS12400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MRP56_RS12400 PF01266 FAD dependent oxidoreductase MRP56_RS12410 PF03606 C4-dicarboxylate anaerobic carrier MRP56_RS12425 PF01863 Protein of unknown function DUF45 MRP56_RS12440 PF01197 Ribosomal protein L31 MRP56_RS12445 PF00444 Ribosomal protein L36 MRP56_RS12450 PF05726 Pirin C-terminal cupin domain MRP56_RS12450 PF02678 Pirin MRP56_RS12455 PF03466 LysR substrate binding domain MRP56_RS12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS12460 PF12833 Helix-turn-helix domain MRP56_RS12460 PF02311 AraC-like ligand binding domain MRP56_RS12465 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS12470 PF00005 ABC transporter MRP56_RS12475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS12480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MRP56_RS12485 PF00596 Class II Aldolase and Adducin N-terminal domain MRP56_RS12490 PF02610 L-arabinose isomerase MRP56_RS12490 PF11762 L-arabinose isomerase C-terminal domain MRP56_RS12580 PF00574 Clp protease MRP56_RS12595 PF02413 Caudovirales tail fibre assembly protein, lambda gpK MRP56_RS12600 PF07471 Phage DNA packaging protein Nu1 MRP56_RS12625 PF05866 Endodeoxyribonuclease RusA MRP56_RS12675 PF01381 Helix-turn-helix MRP56_RS12685 PF01726 LexA DNA binding domain MRP56_RS12685 PF00717 Peptidase S24-like MRP56_RS12700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MRP56_RS12700 PF03120 NAD-dependent DNA ligase OB-fold domain MRP56_RS12700 PF12826 Helix-hairpin-helix motif MRP56_RS12700 PF00533 BRCA1 C Terminus (BRCT) domain MRP56_RS12700 PF01653 NAD-dependent DNA ligase adenylation domain MRP56_RS12735 PF13356 Arm DNA-binding domain MRP56_RS12735 PF14659 Phage integrase, N-terminal SAM-like domain MRP56_RS12735 PF00589 Phage integrase family MRP56_RS12740 PF08411 Exonuclease C-terminal MRP56_RS12740 PF00929 Exonuclease MRP56_RS12755 PF03788 LrgA family MRP56_RS12760 PF04172 LrgB-like family MRP56_RS12765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MRP56_RS12765 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MRP56_RS12770 PF00501 AMP-binding enzyme MRP56_RS12775 PF08891 YfcL protein MRP56_RS12785 PF03741 Integral membrane protein TerC family MRP56_RS12790 PF00691 OmpA family MRP56_RS12795 PF17152 Periplasmic sensor domain MRP56_RS12795 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS12800 PF13689 YfiR/HmsC-like MRP56_RS12805 PF18024 Helix-turn-helix domain MRP56_RS12805 PF00158 Sigma-54 interaction domain MRP56_RS12820 PF01329 Pterin 4 alpha carbinolamine dehydratase MRP56_RS12825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MRP56_RS12830 PF05128 Domain of unknown function (DUF697) MRP56_RS12835 PF04317 YcjX-like family, DUF463 MRP56_RS12845 PF06667 Phage shock protein B MRP56_RS12850 PF04012 PspA/IM30 family MRP56_RS12855 PF00158 Sigma-54 interaction domain MRP56_RS12855 PF02954 Bacterial regulatory protein, Fis family MRP56_RS12860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS12870 PF12911 N-terminal TM domain of oligopeptide transport permease C MRP56_RS12875 PF00005 ABC transporter MRP56_RS12875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MRP56_RS12880 PF00005 ABC transporter MRP56_RS12885 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MRP56_RS12890 PF00156 Phosphoribosyl transferase domain MRP56_RS12895 PF02674 Colicin V production protein MRP56_RS12900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MRP56_RS12900 PF02403 Seryl-tRNA synthetase N-terminal domain MRP56_RS12905 PF12002 MgsA AAA+ ATPase C terminal MRP56_RS12905 PF16193 AAA C-terminal domain MRP56_RS12905 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS12910 PF03548 Outer membrane lipoprotein carrier protein LolA MRP56_RS12915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MRP56_RS12915 PF17854 FtsK alpha domain MRP56_RS12915 PF09397 Ftsk gamma domain MRP56_RS12915 PF01580 FtsK/SpoIIIE family MRP56_RS12920 PF01037 Lrp/AsnC ligand binding domain MRP56_RS12925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MRP56_RS12925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MRP56_RS12930 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS12935 PF17158 Membrane-associated sensor, integral membrane domain MRP56_RS12935 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS12940 PF05433 Glycine zipper 2TM domain MRP56_RS12945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MRP56_RS12950 PF04377 Arginine-tRNA-protein transferase, C terminus MRP56_RS12950 PF04376 Arginine-tRNA-protein transferase, N terminus MRP56_RS12955 PF01176 Translation initiation factor 1A / IF-1 MRP56_RS12960 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS12960 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS12960 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS12960 PF17871 AAA lid domain MRP56_RS12960 PF02861 Clp amino terminal domain, pathogenicity island component MRP56_RS12965 PF02617 ATP-dependent Clp protease adaptor protein ClpS MRP56_RS12970 PF00313 'Cold-shock' DNA-binding domain MRP56_RS12975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MRP56_RS12975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MRP56_RS13005 PF04717 Type VI secretion system, phage-baseplate injector MRP56_RS13035 PF02954 Bacterial regulatory protein, Fis family MRP56_RS13035 PF00158 Sigma-54 interaction domain MRP56_RS13040 PF00004 ATPase family associated with various cellular activities (AAA) MRP56_RS13040 PF07724 AAA domain (Cdc48 subfamily) MRP56_RS13040 PF17871 AAA lid domain MRP56_RS13040 PF10431 C-terminal, D2-small domain, of ClpB protein MRP56_RS13050 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MRP56_RS13070 PF05947 Type VI secretion system, TssF MRP56_RS13080 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MRP56_RS13110 PF04717 Type VI secretion system, phage-baseplate injector MRP56_RS13115 PF05638 Type VI secretion system effector, Hcp MRP56_RS13130 PF10722 Putative bacterial sensory transduction regulator MRP56_RS13140 PF00265 Thymidine kinase MRP56_RS13145 PF03553 Na+/H+ antiporter family MRP56_RS13150 PF00816 H-NS histone family MRP56_RS13155 PF01923 Cobalamin adenosyltransferase MRP56_RS13160 PF12843 Putative quorum-sensing-regulated virulence factor MRP56_RS13165 PF04055 Radical SAM superfamily MRP56_RS13170 PF06508 Queuosine biosynthesis protein QueC MRP56_RS13185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MRP56_RS13190 PF18073 Rubredoxin metal binding domain MRP56_RS13200 PF00216 Bacterial DNA-binding protein MRP56_RS13205 PF00575 S1 RNA binding domain MRP56_RS13210 PF02224 Cytidylate kinase MRP56_RS13215 PF00925 GTP cyclohydrolase II MRP56_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS13220 PF03466 LysR substrate binding domain MRP56_RS13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS13225 PF03466 LysR substrate binding domain MRP56_RS13230 PF07690 Major Facilitator Superfamily MRP56_RS13245 PF00881 Nitroreductase family MRP56_RS13250 PF00563 EAL domain MRP56_RS13250 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS13250 PF13188 PAS domain MRP56_RS13250 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS13260 PF03466 LysR substrate binding domain MRP56_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS13265 PF00072 Response regulator receiver domain MRP56_RS13275 PF01212 Beta-eliminating lyase MRP56_RS13290 PF00248 Aldo/keto reductase family MRP56_RS13295 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MRP56_RS13305 PF03411 Penicillin-insensitive murein endopeptidase MRP56_RS13315 PF04536 TPM domain MRP56_RS13330 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS13335 PF00691 OmpA family MRP56_RS13335 PF13677 Membrane MotB of proton-channel complex MotA/MotB MRP56_RS13340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MRP56_RS13345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MRP56_RS13350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MRP56_RS13350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MRP56_RS13360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MRP56_RS13360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MRP56_RS13365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MRP56_RS13365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS13365 PF00384 Molybdopterin oxidoreductase MRP56_RS13370 PF00146 NADH dehydrogenase MRP56_RS13375 PF12838 4Fe-4S dicluster domain MRP56_RS13380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MRP56_RS13385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MRP56_RS13390 PF00361 Proton-conducting membrane transporter MRP56_RS13390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MRP56_RS13395 PF00361 Proton-conducting membrane transporter MRP56_RS13400 PF00361 Proton-conducting membrane transporter MRP56_RS13405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MRP56_RS13405 PF02769 AIR synthase related protein, C-terminal domain MRP56_RS13405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MRP56_RS13410 PF01464 Transglycosylase SLT domain MRP56_RS13410 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS13415 PF07191 zinc-ribbons MRP56_RS13420 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MRP56_RS13420 PF01926 50S ribosome-binding GTPase MRP56_RS13425 PF13360 PQQ-like domain MRP56_RS13430 PF09976 Tetratricopeptide repeat-like domain MRP56_RS13435 PF03129 Anticodon binding domain MRP56_RS13435 PF13393 Histidyl-tRNA synthetase MRP56_RS13440 PF04551 GcpE protein MRP56_RS13445 PF13464 Domain of unknown function (DUF4115) MRP56_RS13455 PF04055 Radical SAM superfamily MRP56_RS13460 PF00334 Nucleoside diphosphate kinase MRP56_RS13465 PF00883 Cytosol aminopeptidase family, catalytic domain MRP56_RS13465 PF12404 Peptidase MRP56_RS13470 PF00883 Cytosol aminopeptidase family, catalytic domain MRP56_RS13470 PF12404 Peptidase MRP56_RS13475 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS13480 PF00012 Hsp70 protein MRP56_RS13485 PF07743 HSCB C-terminal oligomerisation domain MRP56_RS13490 PF01521 Iron-sulphur cluster biosynthesis MRP56_RS13495 PF01592 NifU-like N terminal domain MRP56_RS13500 PF00266 Aminotransferase class-V MRP56_RS13505 PF02082 Transcriptional regulator MRP56_RS13510 PF00588 SpoU rRNA Methylase family MRP56_RS13520 PF02036 SCP-2 sterol transfer family MRP56_RS13525 PF01136 Peptidase family U32 MRP56_RS13530 PF01136 Peptidase family U32 MRP56_RS13535 PF13181 Tetratricopeptide repeat MRP56_RS13535 PF07719 Tetratricopeptide repeat MRP56_RS13545 PF07549 SecD/SecF GG Motif MRP56_RS13545 PF02355 Protein export membrane protein MRP56_RS13550 PF07549 SecD/SecF GG Motif MRP56_RS13550 PF13721 SecD export protein N-terminal TM region MRP56_RS13550 PF02355 Protein export membrane protein MRP56_RS13555 PF02699 Preprotein translocase subunit MRP56_RS13560 PF01702 Queuine tRNA-ribosyltransferase MRP56_RS13565 PF02547 Queuosine biosynthesis protein MRP56_RS13570 PF00571 CBS domain MRP56_RS13575 PF10417 C-terminal domain of 1-Cys peroxiredoxin MRP56_RS13575 PF00578 AhpC/TSA family MRP56_RS13580 PF13192 Thioredoxin domain MRP56_RS13580 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS13585 PF07690 Major Facilitator Superfamily MRP56_RS13595 PF08241 Methyltransferase domain MRP56_RS13600 PF03960 ArsC family MRP56_RS13605 PF01758 Sodium Bile acid symporter family MRP56_RS13610 PF02374 Anion-transporting ATPase MRP56_RS13615 PF06953 Arsenical resistance operon trans-acting repressor ArsD MRP56_RS13635 PF02347 Glycine cleavage system P-protein MRP56_RS13640 PF01597 Glycine cleavage H-protein MRP56_RS13645 PF08669 Glycine cleavage T-protein C-terminal barrel domain MRP56_RS13645 PF01571 Aminomethyltransferase folate-binding domain MRP56_RS13650 PF01494 FAD binding domain MRP56_RS13655 PF01494 FAD binding domain MRP56_RS13660 PF03695 Uncharacterised protein family (UPF0149) MRP56_RS13665 PF05164 Cell division protein ZapA MRP56_RS13675 PF07690 Major Facilitator Superfamily MRP56_RS13680 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS13680 PF00043 Glutathione S-transferase, C-terminal domain MRP56_RS13690 PF00459 Inositol monophosphatase family MRP56_RS13695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS13695 PF00672 HAMP domain MRP56_RS13695 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS13700 PF02535 ZIP Zinc transporter MRP56_RS13710 PF01048 Phosphorylase superfamily MRP56_RS13720 PF01497 Periplasmic binding protein MRP56_RS13725 PF02719 Polysaccharide biosynthesis protein MRP56_RS13730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MRP56_RS13740 PF03102 NeuB family MRP56_RS13740 PF08666 SAF domain MRP56_RS13745 PF02350 UDP-N-acetylglucosamine 2-epimerase MRP56_RS13760 PF00483 Nucleotidyl transferase MRP56_RS13765 PF02348 Cytidylyltransferase MRP56_RS13780 PF02561 Flagellar protein FliS MRP56_RS13785 PF02465 Flagellar hook-associated protein 2 N-terminus MRP56_RS13785 PF07196 Flagellin hook IN motif MRP56_RS13785 PF07195 Flagellar hook-associated protein 2 C-terminus MRP56_RS13795 PF00700 Bacterial flagellin C-terminal helical region MRP56_RS13795 PF07196 Flagellin hook IN motif MRP56_RS13795 PF00669 Bacterial flagellin N-terminal helical region MRP56_RS13800 PF00700 Bacterial flagellin C-terminal helical region MRP56_RS13800 PF07196 Flagellin hook IN motif MRP56_RS13800 PF00669 Bacterial flagellin N-terminal helical region MRP56_RS13805 PF03458 UPF0126 domain MRP56_RS13815 PF02568 Thiamine biosynthesis protein (ThiI) MRP56_RS13815 PF02926 THUMP domain MRP56_RS13825 PF06832 Penicillin-Binding Protein C-terminus Family MRP56_RS13825 PF00912 Transglycosylase MRP56_RS13825 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS13830 PF07678 A-macroglobulin TED domain MRP56_RS13830 PF00207 Alpha-2-macroglobulin family MRP56_RS13830 PF07703 Alpha-2-macroglobulin bait region domain MRP56_RS13830 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MRP56_RS13830 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MRP56_RS13830 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MRP56_RS13830 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MRP56_RS13830 PF17962 Bacterial macroglobulin domain 6 MRP56_RS13830 PF01835 MG2 domain MRP56_RS13835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS13840 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS13840 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS13840 PF00563 EAL domain MRP56_RS13845 PF04055 Radical SAM superfamily MRP56_RS13855 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS13860 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS13865 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS13870 PF00005 ABC transporter MRP56_RS13875 PF03956 Lysine exporter LysO MRP56_RS13880 PF01979 Amidohydrolase family MRP56_RS13885 PF04336 Acyl carrier protein phosphodiesterase MRP56_RS13900 PF03960 ArsC family MRP56_RS13905 PF00578 AhpC/TSA family MRP56_RS13910 PF01435 Peptidase family M48 MRP56_RS13910 PF13181 Tetratricopeptide repeat MRP56_RS13915 PF01206 Sulfurtransferase TusA MRP56_RS13920 PF01594 AI-2E family transporter MRP56_RS13930 PF00561 alpha/beta hydrolase fold MRP56_RS13935 PF03976 Polyphosphate kinase 2 (PPK2) MRP56_RS13940 PF00005 ABC transporter MRP56_RS13940 PF08402 TOBE domain MRP56_RS13945 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS13950 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS13950 PF14785 Maltose transport system permease protein MalF P2 domain MRP56_RS13955 PF01547 Bacterial extracellular solute-binding protein MRP56_RS13960 PF04245 37-kD nucleoid-associated bacterial protein MRP56_RS13965 PF07208 Protein of unknown function (DUF1414) MRP56_RS13970 PF11893 Domain of unknown function (DUF3413) MRP56_RS13970 PF00884 Sulfatase MRP56_RS13975 PF00593 TonB dependent receptor MRP56_RS13975 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS13980 PF00326 Prolyl oligopeptidase family MRP56_RS13980 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MRP56_RS14000 PF03974 Ecotin MRP56_RS14005 PF04219 Protein of unknown function, DUF MRP56_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14010 PF03466 LysR substrate binding domain MRP56_RS14015 PF01817 Chorismate mutase type II MRP56_RS14015 PF02153 Prephenate dehydrogenase MRP56_RS14020 PF00793 DAHP synthetase I family MRP56_RS14025 PF03009 Glycerophosphoryl diester phosphodiesterase family MRP56_RS14030 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MRP56_RS14030 PF01266 FAD dependent oxidoreductase MRP56_RS14040 PF08220 DeoR-like helix-turn-helix domain MRP56_RS14040 PF00455 DeoR C terminal sensor domain MRP56_RS14045 PF07690 Major Facilitator Superfamily MRP56_RS14050 PF00230 Major intrinsic protein MRP56_RS14055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MRP56_RS14055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MRP56_RS14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14060 PF03466 LysR substrate binding domain MRP56_RS14085 PF00248 Aldo/keto reductase family MRP56_RS14090 PF07690 Major Facilitator Superfamily MRP56_RS14100 PF02322 Cytochrome bd terminal oxidase subunit II MRP56_RS14105 PF01654 Cytochrome bd terminal oxidase subunit I MRP56_RS14110 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS14110 PF00155 Aminotransferase class I and II MRP56_RS14120 PF04391 Protein of unknown function (DUF533) MRP56_RS14135 PF10689 Protein of unknown function (DUF2496) MRP56_RS14145 PF07690 Major Facilitator Superfamily MRP56_RS14150 PF03466 LysR substrate binding domain MRP56_RS14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14160 PF07690 Major Facilitator Superfamily MRP56_RS14165 PF09101 Exotoxin A binding MRP56_RS14165 PF09009 Exotoxin A catalytic MRP56_RS14165 PF09102 Exotoxin A, targeting MRP56_RS14170 PF00849 RNA pseudouridylate synthase MRP56_RS14170 PF01479 S4 domain MRP56_RS14175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MRP56_RS14175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MRP56_RS14185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS14195 PF01844 HNH endonuclease MRP56_RS14200 PF00300 Histidine phosphatase superfamily (branch 1) MRP56_RS14205 PF13309 HTH domain MRP56_RS14205 PF08348 YheO-like PAS domain MRP56_RS14210 PF03313 Serine dehydratase alpha chain MRP56_RS14215 PF01042 Endoribonuclease L-PSP MRP56_RS14225 PF00672 HAMP domain MRP56_RS14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS14240 PF17810 Arginine decarboxylase helical bundle domain MRP56_RS14240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MRP56_RS14240 PF17944 Arginine decarboxylase C-terminal helical extension MRP56_RS14250 PF07687 Peptidase dimerisation domain MRP56_RS14250 PF01546 Peptidase family M20/M25/M40 MRP56_RS14275 PF04264 YceI-like domain MRP56_RS14280 PF03466 LysR substrate binding domain MRP56_RS14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14290 PF01268 Formate--tetrahydrofolate ligase MRP56_RS14295 PF00672 HAMP domain MRP56_RS14295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS14295 PF17200 Single Cache domain 2 MRP56_RS14300 PF01227 GTP cyclohydrolase I MRP56_RS14305 PF00994 Probable molybdopterin binding domain MRP56_RS14305 PF03454 MoeA C-terminal region (domain IV) MRP56_RS14305 PF03453 MoeA N-terminal region (domain I and II) MRP56_RS14310 PF00899 ThiF family MRP56_RS14315 PF00561 alpha/beta hydrolase fold MRP56_RS14320 PF00005 ABC transporter MRP56_RS14320 PF03459 TOBE domain MRP56_RS14325 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS14335 PF02391 MoaE protein MRP56_RS14340 PF02597 ThiS family MRP56_RS14345 PF01967 MoaC family MRP56_RS14350 PF00994 Probable molybdopterin binding domain MRP56_RS14355 PF03264 NapC/NirT cytochrome c family, N-terminal region MRP56_RS14360 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MRP56_RS14365 PF13237 4Fe-4S dicluster domain MRP56_RS14365 PF12801 4Fe-4S binding domain MRP56_RS14370 PF12838 4Fe-4S dicluster domain MRP56_RS14370 PF12800 4Fe-4S binding domain MRP56_RS14375 PF00384 Molybdopterin oxidoreductase MRP56_RS14375 PF10518 TAT (twin-arginine translocation) pathway signal sequence MRP56_RS14375 PF01568 Molydopterin dinucleotide binding domain MRP56_RS14375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MRP56_RS14385 PF13187 4Fe-4S dicluster domain MRP56_RS14385 PF12800 4Fe-4S binding domain MRP56_RS14385 PF00037 4Fe-4S binding domain MRP56_RS14390 PF04055 Radical SAM superfamily MRP56_RS14390 PF06463 Molybdenum Cofactor Synthesis C MRP56_RS14395 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MRP56_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS14395 PF00672 HAMP domain MRP56_RS14395 PF07730 Histidine kinase MRP56_RS14400 PF00072 Response regulator receiver domain MRP56_RS14400 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS14410 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS14410 PF00672 HAMP domain MRP56_RS14410 PF17149 Periplasmic sensor domain found in signal transduction proteins MRP56_RS14410 PF01627 Hpt domain MRP56_RS14410 PF00072 Response regulator receiver domain MRP56_RS14420 PF01933 Uncharacterised protein family UPF0052 MRP56_RS14430 PF13230 Glutamine amidotransferases class-II MRP56_RS14435 PF13580 SIS domain MRP56_RS14440 PF02770 Acyl-CoA dehydrogenase, middle domain MRP56_RS14440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MRP56_RS14440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MRP56_RS14440 PF09317 Domain of unknown function (DUF1974) MRP56_RS14445 PF11849 Domain of unknown function (DUF3369) MRP56_RS14455 PF00929 Exonuclease MRP56_RS14460 PF00075 RNase H MRP56_RS14465 PF08241 Methyltransferase domain MRP56_RS14470 PF16123 Hydroxyacylglutathione hydrolase C-terminus MRP56_RS14470 PF00753 Metallo-beta-lactamase superfamily MRP56_RS14480 PF01476 LysM domain MRP56_RS14480 PF01464 Transglycosylase SLT domain MRP56_RS14485 PF03372 Endonuclease/Exonuclease/phosphatase family MRP56_RS14495 PF03061 Thioesterase superfamily MRP56_RS14505 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS14510 PF01464 Transglycosylase SLT domain MRP56_RS14510 PF14718 Soluble lytic murein transglycosylase L domain MRP56_RS14515 PF00563 EAL domain MRP56_RS14515 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS14515 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS14520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MRP56_RS14540 PF04357 TamB, inner membrane protein subunit of TAM complex MRP56_RS14545 PF01103 Surface antigen MRP56_RS14545 PF07244 Surface antigen variable number repeat MRP56_RS14545 PF17243 POTRA domain TamA domain 1 MRP56_RS14560 PF01625 Peptide methionine sulfoxide reductase MRP56_RS14570 PF02627 Carboxymuconolactone decarboxylase family MRP56_RS14575 PF00403 Heavy-metal-associated domain MRP56_RS14575 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS14575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MRP56_RS14580 PF13416 Bacterial extracellular solute-binding protein MRP56_RS14590 PF00005 ABC transporter MRP56_RS14595 PF01066 CDP-alcohol phosphatidyltransferase MRP56_RS14600 PF13406 Transglycosylase SLT domain MRP56_RS14615 PF01047 MarR family MRP56_RS14625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MRP56_RS14625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MRP56_RS14625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MRP56_RS14625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MRP56_RS14630 PF03925 SeqA protein C-terminal domain MRP56_RS14630 PF17206 SeqA protein N-terminal domain MRP56_RS14635 PF12697 Alpha/beta hydrolase family MRP56_RS14645 PF01402 Ribbon-helix-helix protein, copG family MRP56_RS14650 PF00258 Flavodoxin MRP56_RS14660 PF01475 Ferric uptake regulator family MRP56_RS14665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MRP56_RS14665 PF00749 tRNA synthetases class I (E and Q), catalytic domain MRP56_RS14670 PF02838 Glycosyl hydrolase family 20, domain 2 MRP56_RS14670 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MRP56_RS14670 PF00728 Glycosyl hydrolase family 20, catalytic domain MRP56_RS14670 PF03173 Putative carbohydrate binding domain MRP56_RS14675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MRP56_RS14675 PF00367 phosphotransferase system, EIIB MRP56_RS14675 PF02378 Phosphotransferase system, EIIC MRP56_RS14680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MRP56_RS14685 PF01979 Amidohydrolase family MRP56_RS14690 PF00480 ROK family MRP56_RS14690 PF01047 MarR family MRP56_RS14695 PF00884 Sulfatase MRP56_RS14695 PF08019 Phosphoethanolamine transferase EptA/EptB MRP56_RS14700 PF01709 Transcriptional regulator MRP56_RS14705 PF01336 OB-fold nucleic acid binding domain MRP56_RS14705 PF02938 GAD domain MRP56_RS14705 PF00152 tRNA synthetases class II (D, K and N) MRP56_RS14715 PF13649 Methyltransferase domain MRP56_RS14720 PF08003 Protein of unknown function (DUF1698) MRP56_RS14740 PF00578 AhpC/TSA family MRP56_RS14740 PF10417 C-terminal domain of 1-Cys peroxiredoxin MRP56_RS14745 PF03466 LysR substrate binding domain MRP56_RS14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14750 PF12563 Hemolytic toxin N terminal MRP56_RS14750 PF07968 Leukocidin/Hemolysin toxin family MRP56_RS14755 PF00877 NlpC/P60 family MRP56_RS14765 PF00171 Aldehyde dehydrogenase family MRP56_RS14770 PF08359 YsiA-like protein, C-terminal region MRP56_RS14770 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS14780 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS14790 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS14810 PF01554 MatE MRP56_RS14830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MRP56_RS14830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS14830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MRP56_RS14830 PF10371 Domain of unknown function MRP56_RS14830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MRP56_RS14835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MRP56_RS14835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MRP56_RS14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS14840 PF03473 MOSC domain MRP56_RS14840 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS14840 PF03476 MOSC N-terminal beta barrel domain MRP56_RS14840 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS14840 PF03473 MOSC domain MRP56_RS14840 PF03476 MOSC N-terminal beta barrel domain MRP56_RS14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS14845 PF13426 PAS domain MRP56_RS14845 PF08447 PAS fold MRP56_RS14850 PF01435 Peptidase family M48 MRP56_RS14860 PF12697 Alpha/beta hydrolase family MRP56_RS14860 PF08241 Methyltransferase domain MRP56_RS14865 PF00155 Aminotransferase class I and II MRP56_RS14870 PF06968 Biotin and Thiamin Synthesis associated domain MRP56_RS14870 PF04055 Radical SAM superfamily MRP56_RS14875 PF00202 Aminotransferase class-III MRP56_RS14890 PF01336 OB-fold nucleic acid binding domain MRP56_RS14890 PF00152 tRNA synthetases class II (D, K and N) MRP56_RS14895 PF03605 Anaerobic c4-dicarboxylate membrane transporter MRP56_RS14905 PF07687 Peptidase dimerisation domain MRP56_RS14905 PF01546 Peptidase family M20/M25/M40 MRP56_RS14910 PF03606 C4-dicarboxylate anaerobic carrier MRP56_RS14920 PF03466 LysR substrate binding domain MRP56_RS14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS14925 PF03960 ArsC family MRP56_RS14930 PF01546 Peptidase family M20/M25/M40 MRP56_RS14930 PF07687 Peptidase dimerisation domain MRP56_RS14935 PF02557 D-alanyl-D-alanine carboxypeptidase MRP56_RS14945 PF03471 Transporter associated domain MRP56_RS14945 PF02080 TrkA-C domain MRP56_RS14945 PF00999 Sodium/hydrogen exchanger family MRP56_RS14955 PF03471 Transporter associated domain MRP56_RS14955 PF02080 TrkA-C domain MRP56_RS14955 PF00999 Sodium/hydrogen exchanger family MRP56_RS14965 PF01810 LysE type translocator MRP56_RS14970 PF00672 HAMP domain MRP56_RS14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS14975 PF07509 Protein of unknown function (DUF1523) MRP56_RS14990 PF01156 Inosine-uridine preferring nucleoside hydrolase MRP56_RS14995 PF00849 RNA pseudouridylate synthase MRP56_RS15000 PF01048 Phosphorylase superfamily MRP56_RS15005 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS15010 PF04355 SmpA / OmlA family MRP56_RS15015 PF13460 NAD(P)H-binding MRP56_RS15020 PF03658 RnfH family Ubiquitin MRP56_RS15025 PF03364 Polyketide cyclase / dehydrase and lipid transport MRP56_RS15030 PF01668 SmpB protein MRP56_RS15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS15050 PF03466 LysR substrate binding domain MRP56_RS15055 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS15065 PF00180 Isocitrate/isopropylmalate dehydrogenase MRP56_RS15070 PF12833 Helix-turn-helix domain MRP56_RS15075 PF01238 Phosphomannose isomerase type I MRP56_RS15100 PF00155 Aminotransferase class I and II MRP56_RS15105 PF00367 phosphotransferase system, EIIB MRP56_RS15105 PF02378 Phosphotransferase system, EIIC MRP56_RS15110 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS15110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS15115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MRP56_RS15115 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS15120 PF13411 MerR HTH family regulatory protein MRP56_RS15130 PF00583 Acetyltransferase (GNAT) family MRP56_RS15150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS15150 PF02378 Phosphotransferase system, EIIC MRP56_RS15150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MRP56_RS15155 PF07690 Major Facilitator Superfamily MRP56_RS15160 PF02378 Phosphotransferase system, EIIC MRP56_RS15160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS15160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MRP56_RS15170 PF00849 RNA pseudouridylate synthase MRP56_RS15175 PF00293 NUDIX domain MRP56_RS15185 PF04356 Protein of unknown function (DUF489) MRP56_RS15190 PF00206 Lyase MRP56_RS15190 PF08328 Adenylosuccinate lyase C-terminal MRP56_RS15195 PF08007 Cupin superfamily protein MRP56_RS15205 PF13508 Acetyltransferase (GNAT) domain MRP56_RS15215 PF02798 Glutathione S-transferase, N-terminal domain MRP56_RS15220 PF01243 Pyridoxamine 5'-phosphate oxidase MRP56_RS15220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MRP56_RS15235 PF01189 16S rRNA methyltransferase RsmB/F MRP56_RS15235 PF01029 NusB family MRP56_RS15240 PF00462 Glutaredoxin MRP56_RS15245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MRP56_RS15245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MRP56_RS15250 PF04333 MlaA lipoprotein MRP56_RS15255 PF03918 Cytochrome C biogenesis protein MRP56_RS15260 PF03918 Cytochrome C biogenesis protein MRP56_RS15265 PF08534 Redoxin MRP56_RS15270 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MRP56_RS15270 PF01578 Cytochrome C assembly protein MRP56_RS15275 PF03100 CcmE MRP56_RS15280 PF04995 Heme exporter protein D (CcmD) MRP56_RS15285 PF01578 Cytochrome C assembly protein MRP56_RS15290 PF03379 CcmB protein MRP56_RS15295 PF00005 ABC transporter MRP56_RS15305 PF01584 CheW-like domain MRP56_RS15315 PF13614 AAA domain MRP56_RS15320 PF13677 Membrane MotB of proton-channel complex MotA/MotB MRP56_RS15320 PF00691 OmpA family MRP56_RS15325 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS15330 PF01339 CheB methylesterase MRP56_RS15330 PF00072 Response regulator receiver domain MRP56_RS15335 PF00072 Response regulator receiver domain MRP56_RS15335 PF01627 Hpt domain MRP56_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS15335 PF02895 Signal transducing histidine kinase, homodimeric domain MRP56_RS15335 PF01584 CheW-like domain MRP56_RS15340 PF04344 Chemotaxis phosphatase, CheZ MRP56_RS15345 PF00072 Response regulator receiver domain MRP56_RS15350 PF04542 Sigma-70 region 2 MRP56_RS15350 PF04539 Sigma-70 region 3 MRP56_RS15350 PF04545 Sigma-70, region 4 MRP56_RS15355 PF10609 NUBPL iron-transfer P-loop NTPase MRP56_RS15360 PF00448 SRP54-type protein, GTPase domain MRP56_RS15365 PF00771 FHIPEP family MRP56_RS15370 PF01312 FlhB HrpN YscU SpaS Family MRP56_RS15375 PF01311 Bacterial export proteins, family 1 MRP56_RS15380 PF01313 Bacterial export proteins, family 3 MRP56_RS15385 PF00813 FliP family MRP56_RS15390 PF04347 Flagellar biosynthesis protein, FliO MRP56_RS15395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MRP56_RS15400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MRP56_RS15400 PF02154 Flagellar motor switch protein FliM MRP56_RS15420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MRP56_RS15420 PF18269 T3SS EscN ATPase C-terminal domain MRP56_RS15430 PF01706 FliG C-terminal domain MRP56_RS15430 PF14841 FliG middle domain MRP56_RS15430 PF14842 FliG N-terminal domain MRP56_RS15435 PF01514 Secretory protein of YscJ/FliF family MRP56_RS15435 PF08345 Flagellar M-ring protein C-terminal MRP56_RS15440 PF02049 Flagellar hook-basal body complex protein FliE MRP56_RS15450 PF00072 Response regulator receiver domain MRP56_RS15455 PF04055 Radical SAM superfamily MRP56_RS15455 PF00919 Uncharacterized protein family UPF0004 MRP56_RS15455 PF18693 TRAM domain MRP56_RS15465 PF16671 Actin cross-linking domain MRP56_RS15465 PF12146 Serine aminopeptidase, S33 MRP56_RS15465 PF11647 Membrane Localization Domain MRP56_RS15465 PF11713 Peptidase C80 family MRP56_RS15465 PF07634 RtxA repeat MRP56_RS15470 PF02794 RTX toxin acyltransferase family MRP56_RS15480 PF00005 ABC transporter MRP56_RS15480 PF00664 ABC transporter transmembrane region MRP56_RS15480 PF03412 Peptidase C39 family MRP56_RS15490 PF00664 ABC transporter transmembrane region MRP56_RS15490 PF00005 ABC transporter MRP56_RS15490 PF03412 Peptidase C39 family MRP56_RS15495 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS15495 PF00072 Response regulator receiver domain MRP56_RS15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS15505 PF02685 Glucokinase MRP56_RS15510 PF01418 Helix-turn-helix domain, rpiR family MRP56_RS15510 PF01380 SIS domain MRP56_RS15515 PF02887 Pyruvate kinase, alpha/beta domain MRP56_RS15515 PF00224 Pyruvate kinase, barrel domain MRP56_RS15525 PF00873 AcrB/AcrD/AcrF family MRP56_RS15530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MRP56_RS15530 PF09317 Domain of unknown function (DUF1974) MRP56_RS15530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MRP56_RS15530 PF02770 Acyl-CoA dehydrogenase, middle domain MRP56_RS15535 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS15550 PF00384 Molybdopterin oxidoreductase MRP56_RS15555 PF02634 FdhD/NarQ family MRP56_RS15560 PF03466 LysR substrate binding domain MRP56_RS15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS15580 PF00936 BMC domain MRP56_RS15585 PF00936 BMC domain MRP56_RS15590 PF00936 BMC domain MRP56_RS15595 PF00171 Aldehyde dehydrogenase family MRP56_RS15595 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS15605 PF00171 Aldehyde dehydrogenase family MRP56_RS15605 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS15610 PF01228 Glycine radical MRP56_RS15610 PF02901 Pyruvate formate lyase-like MRP56_RS15615 PF04055 Radical SAM superfamily MRP56_RS15615 PF13187 4Fe-4S dicluster domain MRP56_RS15620 PF00936 BMC domain MRP56_RS15625 PF06130 Phosphate propanoyltransferase MRP56_RS15635 PF00893 Small Multidrug Resistance protein MRP56_RS15640 PF00893 Small Multidrug Resistance protein MRP56_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS15645 PF00672 HAMP domain MRP56_RS15645 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS15645 PF13426 PAS domain MRP56_RS15650 PF00072 Response regulator receiver domain MRP56_RS15650 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS15655 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS15655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS15660 PF00873 AcrB/AcrD/AcrF family MRP56_RS15670 PF17969 L,D-transpeptidase C-terminal domain MRP56_RS15670 PF03734 L,D-transpeptidase catalytic domain MRP56_RS15670 PF01476 LysM domain MRP56_RS15680 PF01575 MaoC like domain MRP56_RS15685 PF05971 RNA methyltransferase MRP56_RS15690 PF00877 NlpC/P60 family MRP56_RS15695 PF01648 4'-phosphopantetheinyl transferase superfamily MRP56_RS15700 PF00085 Thioredoxin MRP56_RS15710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MRP56_RS15715 PF01842 ACT domain MRP56_RS15715 PF00551 Formyl transferase MRP56_RS15725 PF13396 Phospholipase_D-nuclease N-terminal MRP56_RS15725 PF13091 PLD-like domain MRP56_RS15740 PF01551 Peptidase family M23 MRP56_RS15745 PF00128 Alpha amylase, catalytic domain MRP56_RS15750 PF01464 Transglycosylase SLT domain MRP56_RS15750 PF10145 Phage-related minor tail protein MRP56_RS15750 PF01551 Peptidase family M23 MRP56_RS15755 PF00230 Major intrinsic protein MRP56_RS15760 PF02075 Crossover junction endodeoxyribonuclease RuvC MRP56_RS15765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MRP56_RS15785 PF05656 Protein of unknown function (DUF805) MRP56_RS15790 PF12833 Helix-turn-helix domain MRP56_RS15805 PF11842 Domain of unknown function (DUF3362) MRP56_RS15805 PF04055 Radical SAM superfamily MRP56_RS15805 PF08497 Radical SAM N-terminal MRP56_RS15815 PF00873 AcrB/AcrD/AcrF family MRP56_RS15820 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS15820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS15825 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS15830 PF01734 Patatin-like phospholipase MRP56_RS15835 PF00209 Sodium:neurotransmitter symporter family MRP56_RS15850 PF00691 OmpA family MRP56_RS15850 PF01389 OmpA-like transmembrane domain MRP56_RS15855 PF00691 OmpA family MRP56_RS15855 PF01389 OmpA-like transmembrane domain MRP56_RS15860 PF00691 OmpA family MRP56_RS15860 PF01389 OmpA-like transmembrane domain MRP56_RS15865 PF00390 Malic enzyme, N-terminal domain MRP56_RS15865 PF03949 Malic enzyme, NAD binding domain MRP56_RS15870 PF12833 Helix-turn-helix domain MRP56_RS15875 PF01554 MatE MRP56_RS15880 PF10692 Protein of unknown function (DUF2498) MRP56_RS15885 PF00072 Response regulator receiver domain MRP56_RS15885 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS15890 PF00860 Permease family MRP56_RS15900 PF01235 Sodium:alanine symporter family MRP56_RS15905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MRP56_RS15905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MRP56_RS15910 PF01699 Sodium/calcium exchanger protein MRP56_RS15915 PF08534 Redoxin MRP56_RS15925 PF00293 NUDIX domain MRP56_RS15945 PF00005 ABC transporter MRP56_RS15950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS15950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MRP56_RS15960 PF03932 CutC family MRP56_RS15965 PF00480 ROK family MRP56_RS15975 PF01435 Peptidase family M48 MRP56_RS15980 PF12849 PBP superfamily domain MRP56_RS15985 PF00989 PAS fold MRP56_RS15985 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS15985 PF11808 Phosphate regulon sensor protein PhoR MRP56_RS15990 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS15990 PF00072 Response regulator receiver domain MRP56_RS15995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MRP56_RS16000 PF02515 CoA-transferase family III MRP56_RS16005 PF02770 Acyl-CoA dehydrogenase, middle domain MRP56_RS16005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MRP56_RS16005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MRP56_RS16010 PF01590 GAF domain MRP56_RS16010 PF02954 Bacterial regulatory protein, Fis family MRP56_RS16010 PF00158 Sigma-54 interaction domain MRP56_RS16015 PF00171 Aldehyde dehydrogenase family MRP56_RS16025 PF00892 EamA-like transporter family MRP56_RS16030 PF12431 Transcriptional regulator MRP56_RS16030 PF00072 Response regulator receiver domain MRP56_RS16035 PF00989 PAS fold MRP56_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS16035 PF17203 Single cache domain 3 MRP56_RS16035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MRP56_RS16040 PF03949 Malic enzyme, NAD binding domain MRP56_RS16040 PF00390 Malic enzyme, N-terminal domain MRP56_RS16045 PF03390 2-hydroxycarboxylate transporter family MRP56_RS16055 PF01047 MarR family MRP56_RS16060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS16060 PF00529 HlyD membrane-fusion protein of T1SS MRP56_RS16085 PF01679 Proteolipid membrane potential modulator MRP56_RS16095 PF13597 Anaerobic ribonucleoside-triphosphate reductase MRP56_RS16095 PF03477 ATP cone domain MRP56_RS16105 PF12826 Helix-hairpin-helix motif MRP56_RS16105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MRP56_RS16105 PF03120 NAD-dependent DNA ligase OB-fold domain MRP56_RS16105 PF01653 NAD-dependent DNA ligase adenylation domain MRP56_RS16105 PF00533 BRCA1 C Terminus (BRCT) domain MRP56_RS16110 PF04354 ZipA, C-terminal FtsZ-binding domain MRP56_RS16115 PF06470 SMC proteins Flexible Hinge Domain MRP56_RS16115 PF02463 RecF/RecN/SMC N terminal domain MRP56_RS16125 PF03458 UPF0126 domain MRP56_RS16135 PF05951 Bacterial protein of unknown function (DUF882) MRP56_RS16140 PF01471 Putative peptidoglycan binding domain MRP56_RS16140 PF03734 L,D-transpeptidase catalytic domain MRP56_RS16155 PF00535 Glycosyl transferase family 2 MRP56_RS16170 PF00128 Alpha amylase, catalytic domain MRP56_RS16180 PF00072 Response regulator receiver domain MRP56_RS16180 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS16200 PF02254 TrkA-N domain MRP56_RS16200 PF00999 Sodium/hydrogen exchanger family MRP56_RS16200 PF02080 TrkA-C domain MRP56_RS16205 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS16210 PF11734 TilS substrate C-terminal domain MRP56_RS16210 PF09179 TilS substrate binding domain MRP56_RS16210 PF01171 PP-loop family MRP56_RS16215 PF05649 Peptidase family M13 MRP56_RS16215 PF01431 Peptidase family M13 MRP56_RS16225 PF12848 ABC transporter MRP56_RS16225 PF16326 ABC transporter C-terminal domain MRP56_RS16225 PF00005 ABC transporter MRP56_RS16230 PF13302 Acetyltransferase (GNAT) domain MRP56_RS16235 PF13520 Amino acid permease MRP56_RS16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16240 PF03466 LysR substrate binding domain MRP56_RS16245 PF12146 Serine aminopeptidase, S33 MRP56_RS16250 PF12146 Serine aminopeptidase, S33 MRP56_RS16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16255 PF03466 LysR substrate binding domain MRP56_RS16260 PF12706 Beta-lactamase superfamily domain MRP56_RS16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16270 PF03466 LysR substrate binding domain MRP56_RS16280 PF08543 Phosphomethylpyrimidine kinase MRP56_RS16285 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MRP56_RS16285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MRP56_RS16285 PF01276 Orn/Lys/Arg decarboxylase, major domain MRP56_RS16290 PF13520 Amino acid permease MRP56_RS16295 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS16295 PF18500 CadC C-terminal domain 1 MRP56_RS16300 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MRP56_RS16305 PF07733 Bacterial DNA polymerase III alpha NTPase domain MRP56_RS16305 PF01336 OB-fold nucleic acid binding domain MRP56_RS16305 PF02811 PHP domain MRP56_RS16305 PF14579 Helix-hairpin-helix motif MRP56_RS16305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MRP56_RS16310 PF01351 Ribonuclease HII MRP56_RS16315 PF02684 Lipid-A-disaccharide synthetase MRP56_RS16320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MRP56_RS16320 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS16325 PF07977 FabA-like domain MRP56_RS16330 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS16330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MRP56_RS16335 PF03938 Outer membrane protein (OmpH-like) MRP56_RS16340 PF07244 Surface antigen variable number repeat MRP56_RS16340 PF01103 Surface antigen MRP56_RS16345 PF02163 Peptidase family M50 MRP56_RS16345 PF17820 PDZ domain MRP56_RS16350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MRP56_RS16350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MRP56_RS16350 PF13288 DXP reductoisomerase C-terminal domain MRP56_RS16360 PF01255 Putative undecaprenyl diphosphate synthase MRP56_RS16365 PF01765 Ribosome recycling factor MRP56_RS16370 PF00696 Amino acid kinase family MRP56_RS16375 PF00889 Elongation factor TS MRP56_RS16380 PF00318 Ribosomal protein S2 MRP56_RS16385 PF00557 Metallopeptidase family M24 MRP56_RS16390 PF08335 GlnD PII-uridylyltransferase MRP56_RS16390 PF01966 HD domain MRP56_RS16390 PF01842 ACT domain MRP56_RS16390 PF01909 Nucleotidyltransferase domain MRP56_RS16395 PF14602 Hexapeptide repeat of succinyl-transferase MRP56_RS16395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MRP56_RS16395 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS16400 PF11944 Protein of unknown function (DUF3461) MRP56_RS16405 PF00367 phosphotransferase system, EIIB MRP56_RS16405 PF02378 Phosphotransferase system, EIIC MRP56_RS16410 PF07148 Maltose operon periplasmic protein precursor (MalM) MRP56_RS16420 PF00258 Flavodoxin MRP56_RS16425 PF00849 RNA pseudouridylate synthase MRP56_RS16430 PF04287 tRNA pseudouridine synthase C MRP56_RS16455 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MRP56_RS16460 PF07348 Syd protein (SUKH-2) MRP56_RS16465 PF14489 QueF-like protein MRP56_RS16465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MRP56_RS16475 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS16480 PF03641 Possible lysine decarboxylase MRP56_RS16480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MRP56_RS16480 PF11892 Domain of unknown function (DUF3412) MRP56_RS16485 PF01367 5'-3' exonuclease, C-terminal SAM fold MRP56_RS16485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MRP56_RS16490 PF00180 Isocitrate/isopropylmalate dehydrogenase MRP56_RS16490 PF18324 Hypothetical protein TT1725 MRP56_RS16500 PF01728 FtsJ-like methyltransferase MRP56_RS16500 PF18125 RlmM ferredoxin-like domain MRP56_RS16505 PF04241 Protein of unknown function (DUF423) MRP56_RS16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16515 PF03466 LysR substrate binding domain MRP56_RS16520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS16520 PF00672 HAMP domain MRP56_RS16525 PF00817 impB/mucB/samB family MRP56_RS16525 PF11799 impB/mucB/samB family C-terminal domain MRP56_RS16525 PF11798 IMS family HHH motif MRP56_RS16540 PF02424 ApbE family MRP56_RS16545 PF00175 Oxidoreductase NAD-binding domain MRP56_RS16545 PF00970 Oxidoreductase FAD-binding domain MRP56_RS16545 PF00111 2Fe-2S iron-sulfur cluster binding domain MRP56_RS16550 PF02508 Rnf-Nqr subunit, membrane protein MRP56_RS16555 PF02508 Rnf-Nqr subunit, membrane protein MRP56_RS16560 PF04205 FMN-binding domain MRP56_RS16565 PF03116 NQR2, RnfD, RnfE family MRP56_RS16570 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MRP56_RS16570 PF11973 NQRA C-terminal domain MRP56_RS16580 PF01722 BolA-like protein MRP56_RS16585 PF05175 Methyltransferase small domain MRP56_RS16595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MRP56_RS16605 PF07690 Major Facilitator Superfamily MRP56_RS16610 PF03502 Nucleoside-specific channel-forming protein, Tsx MRP56_RS16615 PF04461 Protein of unknown function (DUF520) MRP56_RS16620 PF02558 Ketopantoate reductase PanE/ApbA MRP56_RS16620 PF08546 Ketopantoate reductase PanE/ApbA C terminal MRP56_RS16625 PF01965 DJ-1/PfpI family MRP56_RS16630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS16630 PF00205 Thiamine pyrophosphate enzyme, central domain MRP56_RS16630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MRP56_RS16635 PF03306 Alpha-acetolactate decarboxylase MRP56_RS16640 PF03466 LysR substrate binding domain MRP56_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16670 PF04717 Type VI secretion system, phage-baseplate injector MRP56_RS16680 PF05638 Type VI secretion system effector, Hcp MRP56_RS16685 PF03472 Autoinducer binding domain MRP56_RS16685 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS16695 PF06965 Na+/H+ antiporter 1 MRP56_RS16695 PF13462 Thioredoxin MRP56_RS16700 PF16363 GDP-mannose 4,6 dehydratase MRP56_RS16705 PF00970 Oxidoreductase FAD-binding domain MRP56_RS16705 PF00042 Globin MRP56_RS16705 PF00175 Oxidoreductase NAD-binding domain MRP56_RS16710 PF03063 Prismane/CO dehydrogenase family MRP56_RS16715 PF00210 Ferritin-like domain MRP56_RS16755 PF00106 short chain dehydrogenase MRP56_RS16765 PF03441 FAD binding domain of DNA photolyase MRP56_RS16765 PF00875 DNA photolyase MRP56_RS16770 PF13411 MerR HTH family regulatory protein MRP56_RS16775 PF08349 Protein of unknown function (DUF1722) MRP56_RS16805 PF01817 Chorismate mutase type II MRP56_RS16805 PF00800 Prephenate dehydratase MRP56_RS16840 PF02743 Cache domain MRP56_RS16840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS16840 PF00672 HAMP domain MRP56_RS16845 PF03573 outer membrane porin, OprD family MRP56_RS16850 PF00106 short chain dehydrogenase MRP56_RS16875 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MRP56_RS16885 PF12833 Helix-turn-helix domain MRP56_RS16885 PF06029 AlkA N-terminal domain MRP56_RS16885 PF02805 Metal binding domain of Ada MRP56_RS16885 PF00730 HhH-GPD superfamily base excision DNA repair protein MRP56_RS16890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MRP56_RS16890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MRP56_RS16900 PF12392 Collagenase MRP56_RS16900 PF01136 Peptidase family U32 MRP56_RS16905 PF01810 LysE type translocator MRP56_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS16910 PF03466 LysR substrate binding domain MRP56_RS16915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MRP56_RS16915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MRP56_RS16920 PF00672 HAMP domain MRP56_RS16920 PF02743 Cache domain MRP56_RS16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS16925 PF00072 Response regulator receiver domain MRP56_RS16935 PF01627 Hpt domain MRP56_RS16935 PF01584 CheW-like domain MRP56_RS16935 PF02895 Signal transducing histidine kinase, homodimeric domain MRP56_RS16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS16935 PF07194 P2 response regulator binding domain MRP56_RS16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS16940 PF00672 HAMP domain MRP56_RS16940 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS16945 PF01584 CheW-like domain MRP56_RS16950 PF02203 Tar ligand binding domain homologue MRP56_RS16950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS16950 PF00672 HAMP domain MRP56_RS16955 PF03705 CheR methyltransferase, all-alpha domain MRP56_RS16955 PF01739 CheR methyltransferase, SAM binding domain MRP56_RS16960 PF03975 CheD chemotactic sensory transduction MRP56_RS16965 PF01339 CheB methylesterase MRP56_RS16965 PF00072 Response regulator receiver domain MRP56_RS16970 PF00266 Aminotransferase class-V MRP56_RS17000 PF00665 Integrase core domain MRP56_RS17005 PF01695 IstB-like ATP binding protein MRP56_RS17010 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS17010 PF01627 Hpt domain MRP56_RS17010 PF00072 Response regulator receiver domain MRP56_RS17010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MRP56_RS17010 PF00672 HAMP domain MRP56_RS17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS17015 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS17015 PF00072 Response regulator receiver domain MRP56_RS17025 PF15976 CS1-pili formation C-terminal MRP56_RS17025 PF16967 E-set like domain MRP56_RS17040 PF00989 PAS fold MRP56_RS17040 PF01590 GAF domain MRP56_RS17040 PF00563 EAL domain MRP56_RS17040 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS17045 PF16325 Peptidase family U32 C-terminal domain MRP56_RS17045 PF01136 Peptidase family U32 MRP56_RS17050 PF12838 4Fe-4S dicluster domain MRP56_RS17060 PF01168 Alanine racemase, N-terminal domain MRP56_RS17060 PF00842 Alanine racemase, C-terminal domain MRP56_RS17065 PF03796 DnaB-like helicase C terminal domain MRP56_RS17065 PF00772 DnaB-like helicase N terminal domain MRP56_RS17075 PF12792 CSS motif domain associated with EAL MRP56_RS17075 PF00563 EAL domain MRP56_RS17080 PF02872 5'-nucleotidase, C-terminal domain MRP56_RS17080 PF00149 Calcineurin-like phosphoesterase MRP56_RS17100 PF00158 Sigma-54 interaction domain MRP56_RS17100 PF00072 Response regulator receiver domain MRP56_RS17100 PF02954 Bacterial regulatory protein, Fis family MRP56_RS17105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MRP56_RS17105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS17115 PF04102 SlyX MRP56_RS17120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS17125 PF09526 Probable metal-binding protein (DUF2387) MRP56_RS17135 PF00072 Response regulator receiver domain MRP56_RS17135 PF01584 CheW-like domain MRP56_RS17140 PF00561 alpha/beta hydrolase fold MRP56_RS17145 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS17145 PF01590 GAF domain MRP56_RS17145 PF00563 EAL domain MRP56_RS17145 PF00360 Phytochrome region MRP56_RS17150 PF06794 Uncharacterised protein family (UPF0270) MRP56_RS17155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MRP56_RS17155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MRP56_RS17155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MRP56_RS17160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MRP56_RS17165 PF00535 Glycosyl transferase family 2 MRP56_RS17170 PF00551 Formyl transferase MRP56_RS17170 PF02911 Formyl transferase, C-terminal domain MRP56_RS17170 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS17175 PF01522 Polysaccharide deacetylase MRP56_RS17180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MRP56_RS17185 PF00892 EamA-like transporter family MRP56_RS17190 PF00893 Small Multidrug Resistance protein MRP56_RS17195 PF00485 Phosphoribulokinase / Uridine kinase family MRP56_RS17210 PF02566 OsmC-like protein MRP56_RS17215 PF13545 Crp-like helix-turn-helix domain MRP56_RS17215 PF00027 Cyclic nucleotide-binding domain MRP56_RS17220 PF13847 Methyltransferase domain MRP56_RS17225 PF18416 N-acetylglucosamine binding protein domain 2 MRP56_RS17225 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MRP56_RS17230 PF17945 Beta/Gamma crystallin MRP56_RS17230 PF12561 ToxR activated gene A lipoprotein domain MRP56_RS17235 PF08329 Chitinase A, N-terminal domain MRP56_RS17235 PF00704 Glycosyl hydrolases family 18 MRP56_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS17240 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS17240 PF00989 PAS fold MRP56_RS17250 PF13443 Cro/C1-type HTH DNA-binding domain MRP56_RS17255 PF12832 MFS_1 like family MRP56_RS17260 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS17260 PF00593 TonB dependent receptor MRP56_RS17280 PF01243 Pyridoxamine 5'-phosphate oxidase MRP56_RS17285 PF06228 Haem utilisation ChuX/HutX MRP56_RS17295 PF01032 FecCD transport family MRP56_RS17300 PF00005 ABC transporter MRP56_RS17310 PF01370 NAD dependent epimerase/dehydratase family MRP56_RS17320 PF01791 DeoC/LacD family aldolase MRP56_RS17325 PF01773 Na+ dependent nucleoside transporter N-terminus MRP56_RS17325 PF07662 Na+ dependent nucleoside transporter C-terminus MRP56_RS17325 PF07670 Nucleoside recognition MRP56_RS17330 PF01048 Phosphorylase superfamily MRP56_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS17335 PF03466 LysR substrate binding domain MRP56_RS17350 PF01464 Transglycosylase SLT domain MRP56_RS17355 PF01048 Phosphorylase superfamily MRP56_RS17370 PF00005 ABC transporter MRP56_RS17370 PF12848 ABC transporter MRP56_RS17380 PF00860 Permease family MRP56_RS17385 PF00226 DnaJ domain MRP56_RS17385 PF05099 Tellurite resistance protein TerB MRP56_RS17390 PF00483 Nucleotidyl transferase MRP56_RS17395 PF01636 Phosphotransferase enzyme family MRP56_RS17400 PF03968 OstA-like protein MRP56_RS17400 PF04453 LPS transport system D MRP56_RS17405 PF00639 PPIC-type PPIASE domain MRP56_RS17405 PF09312 SurA N-terminal domain MRP56_RS17410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MRP56_RS17415 PF00398 Ribosomal RNA adenine dimethylase MRP56_RS17420 PF04379 ApaG domain MRP56_RS17425 PF00149 Calcineurin-like phosphoesterase MRP56_RS17435 PF00296 Luciferase-like monooxygenase MRP56_RS17455 PF00501 AMP-binding enzyme MRP56_RS17455 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS17460 PF07670 Nucleoside recognition MRP56_RS17465 PF01018 GTP1/OBG MRP56_RS17465 PF01926 50S ribosome-binding GTPase MRP56_RS17470 PF01016 Ribosomal L27 protein MRP56_RS17475 PF00829 Ribosomal prokaryotic L21 protein MRP56_RS17480 PF00348 Polyprenyl synthetase MRP56_RS17485 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MRP56_RS17490 PF01145 SPFH domain / Band 7 family MRP56_RS17495 PF12221 Bacterial membrane protein N terminal MRP56_RS17495 PF01145 SPFH domain / Band 7 family MRP56_RS17500 PF13167 GTP-binding GTPase N-terminal MRP56_RS17500 PF16360 GTP-binding GTPase Middle Region MRP56_RS17500 PF01926 50S ribosome-binding GTPase MRP56_RS17505 PF17209 Hfq protein MRP56_RS17515 PF08676 MutL C terminal dimerisation domain MRP56_RS17515 PF01119 DNA mismatch repair protein, C-terminal domain MRP56_RS17520 PF01520 N-acetylmuramoyl-L-alanine amidase MRP56_RS17525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MRP56_RS17530 PF01256 Carbohydrate kinase MRP56_RS17530 PF03853 YjeF-related protein N-terminus MRP56_RS17535 PF08331 Domain of unknown function (DUF1730) MRP56_RS17540 PF00480 ROK family MRP56_RS17550 PF00005 ABC transporter MRP56_RS17550 PF09383 NIL domain MRP56_RS17555 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS17560 PF03180 NLPA lipoprotein MRP56_RS17565 PF02357 Transcription termination factor nusG MRP56_RS17570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS17570 PF00672 HAMP domain MRP56_RS17570 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS17575 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS17575 PF00563 EAL domain MRP56_RS17575 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS17580 PF00072 Response regulator receiver domain MRP56_RS17580 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS17580 PF09456 RcsC Alpha-Beta-Loop (ABL) MRP56_RS17590 PF13286 Phosphohydrolase-associated domain MRP56_RS17590 PF01966 HD domain MRP56_RS17595 PF00989 PAS fold MRP56_RS17595 PF01627 Hpt domain MRP56_RS17595 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS17595 PF00072 Response regulator receiver domain MRP56_RS17595 PF18415 Histidine kinase receptor ArcB trans-membrane domain MRP56_RS17615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MRP56_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS17620 PF03466 LysR substrate binding domain MRP56_RS17630 PF01259 SAICAR synthetase MRP56_RS17635 PF06804 NlpB/DapX lipoprotein MRP56_RS17640 PF00701 Dihydrodipicolinate synthetase family MRP56_RS17645 PF01842 ACT domain MRP56_RS17650 PF00578 AhpC/TSA family MRP56_RS17655 PF03887 YfbU domain MRP56_RS17660 PF04217 Protein of unknown function, DUF412 MRP56_RS17665 PF00871 Acetokinase family MRP56_RS17670 PF07085 DRTGG domain MRP56_RS17670 PF01515 Phosphate acetyl/butaryl transferase MRP56_RS17675 PF10369 Small subunit of acetolactate synthase MRP56_RS17680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS17680 PF00205 Thiamine pyrophosphate enzyme, central domain MRP56_RS17680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MRP56_RS17690 PF04101 Glycosyltransferase family 28 C-terminal domain MRP56_RS17690 PF03033 Glycosyltransferase family 28 N-terminal domain MRP56_RS17695 PF01569 PAP2 superfamily MRP56_RS17705 PF00682 HMGL-like MRP56_RS17705 PF08502 LeuA allosteric (dimerisation) domain MRP56_RS17710 PF00180 Isocitrate/isopropylmalate dehydrogenase MRP56_RS17715 PF00330 Aconitase family (aconitate hydratase) MRP56_RS17720 PF00694 Aconitase C-terminal domain MRP56_RS17740 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS17745 PF00005 ABC transporter MRP56_RS17755 PF02562 PhoH-like protein MRP56_RS17755 PF13638 PIN domain MRP56_RS17765 PF02867 Ribonucleotide reductase, barrel domain MRP56_RS17765 PF00317 Ribonucleotide reductase, all-alpha domain MRP56_RS17765 PF08343 Ribonucleotide reductase N-terminal MRP56_RS17795 PF00271 Helicase conserved C-terminal domain MRP56_RS17795 PF12137 RNA polymerase recycling family C-terminal MRP56_RS17795 PF00176 SNF2 family N-terminal domain MRP56_RS17795 PF18339 RapA N-terminal Tudor like domain 1 MRP56_RS17795 PF18337 RapA N-terminal Tudor like domain MRP56_RS17800 PF00849 RNA pseudouridylate synthase MRP56_RS17810 PF13188 PAS domain MRP56_RS17810 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS17810 PF00563 EAL domain MRP56_RS17810 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS17820 PF00118 TCP-1/cpn60 chaperonin family MRP56_RS17825 PF00166 Chaperonin 10 Kd subunit MRP56_RS17830 PF01554 MatE MRP56_RS17835 PF04186 FxsA cytoplasmic membrane protein MRP56_RS17840 PF00206 Lyase MRP56_RS17840 PF10415 Fumarase C C-terminus MRP56_RS17845 PF03605 Anaerobic c4-dicarboxylate membrane transporter MRP56_RS17850 PF00267 Gram-negative porin MRP56_RS17855 PF07690 Major Facilitator Superfamily MRP56_RS17860 PF03466 LysR substrate binding domain MRP56_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS17865 PF04151 Bacterial pre-peptidase C-terminal domain MRP56_RS17865 PF02868 Thermolysin metallopeptidase, alpha-helical domain MRP56_RS17865 PF01447 Thermolysin metallopeptidase, catalytic domain MRP56_RS17865 PF03413 Peptidase propeptide and YPEB domain MRP56_RS17865 PF07504 Fungalysin/Thermolysin Propeptide Motif MRP56_RS17870 PF13302 Acetyltransferase (GNAT) domain MRP56_RS17875 PF13302 Acetyltransferase (GNAT) domain MRP56_RS17885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MRP56_RS17885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MRP56_RS17890 PF07690 Major Facilitator Superfamily MRP56_RS17895 PF01725 Ham1 family MRP56_RS17900 PF04055 Radical SAM superfamily MRP56_RS17900 PF06969 HemN C-terminal domain MRP56_RS17905 PF03889 Alternative ribosome-rescue factor A MRP56_RS17915 PF13411 MerR HTH family regulatory protein MRP56_RS17920 PF01808 AICARFT/IMPCHase bienzyme MRP56_RS17920 PF02142 MGS-like domain MRP56_RS17925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MRP56_RS17925 PF02843 Phosphoribosylglycinamide synthetase, C domain MRP56_RS17925 PF02844 Phosphoribosylglycinamide synthetase, N domain MRP56_RS17940 PF00128 Alpha amylase, catalytic domain MRP56_RS17950 PF00140 Sigma-70 factor, region 1.2 MRP56_RS17950 PF04542 Sigma-70 region 2 MRP56_RS17950 PF04539 Sigma-70 region 3 MRP56_RS17950 PF04545 Sigma-70, region 4 MRP56_RS17950 PF04546 Sigma-70, non-essential region MRP56_RS17950 PF03979 Sigma-70 factor, region 1.1 MRP56_RS17955 PF10410 DnaB-helicase binding domain of primase MRP56_RS17955 PF08278 DNA primase DnaG DnaB-binding MRP56_RS17955 PF08275 DNA primase catalytic core, N-terminal domain MRP56_RS17955 PF01807 CHC2 zinc finger MRP56_RS17960 PF09424 Yqey-like protein MRP56_RS17965 PF01165 Ribosomal protein S21 MRP56_RS17970 PF00814 Glycoprotease family MRP56_RS17975 PF04545 Sigma-70, region 4 MRP56_RS17975 PF04539 Sigma-70 region 3 MRP56_RS17975 PF04542 Sigma-70 region 2 MRP56_RS17975 PF00140 Sigma-70 factor, region 1.2 MRP56_RS17980 PF01551 Peptidase family M23 MRP56_RS17980 PF01476 LysM domain MRP56_RS17985 PF09335 SNARE associated Golgi protein MRP56_RS17995 PF01975 Survival protein SurE MRP56_RS18000 PF01142 tRNA pseudouridine synthase D (TruD) MRP56_RS18005 PF02542 YgbB family MRP56_RS18010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MRP56_RS18015 PF04977 Septum formation initiator MRP56_RS18020 PF03952 Enolase, N-terminal domain MRP56_RS18020 PF00113 Enolase, C-terminal TIM barrel domain MRP56_RS18025 PF00117 Glutamine amidotransferase class-I MRP56_RS18025 PF06418 CTP synthase N-terminus MRP56_RS18030 PF03819 MazG nucleotide pyrophosphohydrolase domain MRP56_RS18035 PF13291 ACT domain MRP56_RS18035 PF04607 Region found in RelA / SpoT proteins MRP56_RS18035 PF02824 TGS domain MRP56_RS18040 PF01938 TRAM domain MRP56_RS18040 PF05958 tRNA (Uracil-5-)-methyltransferase MRP56_RS18045 PF00072 Response regulator receiver domain MRP56_RS18045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MRP56_RS18045 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS18045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS18045 PF00672 HAMP domain MRP56_RS18045 PF01627 Hpt domain MRP56_RS18050 PF07308 Protein of unknown function (DUF1456) MRP56_RS18055 PF01510 N-acetylmuramoyl-L-alanine amidase MRP56_RS18060 PF00455 DeoR C terminal sensor domain MRP56_RS18060 PF08220 DeoR-like helix-turn-helix domain MRP56_RS18065 PF08013 Tagatose 6 phosphate kinase MRP56_RS18070 PF01380 SIS domain MRP56_RS18075 PF03830 PTS system sorbose subfamily IIB component MRP56_RS18080 PF03609 PTS system sorbose-specific iic component MRP56_RS18085 PF03613 PTS system mannose/fructose/sorbose family IID component MRP56_RS18090 PF03610 PTS system fructose IIA component MRP56_RS18095 PF01979 Amidohydrolase family MRP56_RS18100 PF01116 Fructose-bisphosphate aldolase class-II MRP56_RS18110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MRP56_RS18115 PF11967 Recombination protein O N terminal MRP56_RS18115 PF02565 Recombination protein O C terminal MRP56_RS18120 PF07650 KH domain MRP56_RS18120 PF01926 50S ribosome-binding GTPase MRP56_RS18125 PF00035 Double-stranded RNA binding motif MRP56_RS18125 PF14622 Ribonuclease-III-like MRP56_RS18130 PF10502 Signal peptidase, peptidase S26 MRP56_RS18135 PF00679 Elongation factor G C-terminus MRP56_RS18135 PF00009 Elongation factor Tu GTP binding domain MRP56_RS18135 PF06421 GTP-binding protein LepA C-terminus MRP56_RS18135 PF03144 Elongation factor Tu domain 2 MRP56_RS18145 PF03888 MucB/RseB N-terminal domain MRP56_RS18145 PF17188 MucB/RseB C-terminal domain MRP56_RS18150 PF03873 Anti sigma-E protein RseA, C-terminal domain MRP56_RS18150 PF03872 Anti sigma-E protein RseA, N-terminal domain MRP56_RS18155 PF04542 Sigma-70 region 2 MRP56_RS18155 PF08281 Sigma-70, region 4 MRP56_RS18160 PF00890 FAD binding domain MRP56_RS18160 PF02910 Fumarate reductase flavoprotein C-term MRP56_RS18170 PF03937 Flavinator of succinate dehydrogenase MRP56_RS18175 PF01571 Aminomethyltransferase folate-binding domain MRP56_RS18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS18180 PF03466 LysR substrate binding domain MRP56_RS18195 PF03091 CutA1 divalent ion tolerance protein MRP56_RS18200 PF11412 Disulphide bond corrector protein DsbC MRP56_RS18200 PF02683 Cytochrome C biogenesis protein transmembrane region MRP56_RS18210 PF01266 FAD dependent oxidoreductase MRP56_RS18215 PF01116 Fructose-bisphosphate aldolase class-II MRP56_RS18220 PF00162 Phosphoglycerate kinase MRP56_RS18225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MRP56_RS18225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MRP56_RS18230 PF00480 ROK family MRP56_RS18235 PF01208 Uroporphyrinogen decarboxylase (URO-D) MRP56_RS18240 PF00293 NUDIX domain MRP56_RS18240 PF09297 NADH pyrophosphatase zinc ribbon domain MRP56_RS18245 PF00171 Aldehyde dehydrogenase family MRP56_RS18245 PF01619 Proline dehydrogenase MRP56_RS18245 PF14850 DNA-binding domain of Proline dehydrogenase MRP56_RS18245 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MRP56_RS18250 PF08239 Bacterial SH3 domain MRP56_RS18255 PF00027 Cyclic nucleotide-binding domain MRP56_RS18255 PF00520 Ion transport protein MRP56_RS18260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS18260 PF00672 HAMP domain MRP56_RS18260 PF02743 Cache domain MRP56_RS18270 PF08335 GlnD PII-uridylyltransferase MRP56_RS18270 PF03710 Glutamate-ammonia ligase adenylyltransferase MRP56_RS18290 PF00326 Prolyl oligopeptidase family MRP56_RS18290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MRP56_RS18295 PF00291 Pyridoxal-phosphate dependent enzyme MRP56_RS18300 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS18305 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS18310 PF00005 ABC transporter MRP56_RS18315 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS18320 PF02687 FtsX-like permease family MRP56_RS18320 PF00005 ABC transporter MRP56_RS18320 PF12704 MacB-like periplasmic core domain MRP56_RS18325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MRP56_RS18330 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS18330 PF00072 Response regulator receiver domain MRP56_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS18335 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS18335 PF00672 HAMP domain MRP56_RS18335 PF16527 Two-component sensor protein CpxA, periplasmic domain MRP56_RS18340 PF09297 NADH pyrophosphatase zinc ribbon domain MRP56_RS18340 PF00293 NUDIX domain MRP56_RS18340 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MRP56_RS18375 PF03060 Nitronate monooxygenase MRP56_RS18385 PF00445 Ribonuclease T2 family MRP56_RS18400 PF03150 Di-haem cytochrome c peroxidase MRP56_RS18400 PF00034 Cytochrome c MRP56_RS18405 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MRP56_RS18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS18425 PF03466 LysR substrate binding domain MRP56_RS18430 PF00271 Helicase conserved C-terminal domain MRP56_RS18430 PF00270 DEAD/DEAH box helicase MRP56_RS18445 PF00753 Metallo-beta-lactamase superfamily MRP56_RS18450 PF13286 Phosphohydrolase-associated domain MRP56_RS18450 PF01966 HD domain MRP56_RS18455 PF13286 Phosphohydrolase-associated domain MRP56_RS18455 PF01966 HD domain MRP56_RS18460 PF01425 Amidase MRP56_RS18465 PF04371 Porphyromonas-type peptidyl-arginine deiminase MRP56_RS18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS18470 PF03466 LysR substrate binding domain MRP56_RS18475 PF04480 Protein of unknown function (DUF559) MRP56_RS18485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MRP56_RS18490 PF00583 Acetyltransferase (GNAT) family MRP56_RS18510 PF00009 Elongation factor Tu GTP binding domain MRP56_RS18510 PF03144 Elongation factor Tu domain 2 MRP56_RS18510 PF16658 Class II release factor RF3, C-terminal domain MRP56_RS18515 PF00072 Response regulator receiver domain MRP56_RS18515 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS18520 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS18525 PF05762 VWA domain containing CoxE-like protein MRP56_RS18530 PF17868 AAA lid domain MRP56_RS18530 PF12592 Protein of unknown function (DUF3763) MRP56_RS18530 PF07728 AAA domain (dynein-related subfamily) MRP56_RS18540 PF00583 Acetyltransferase (GNAT) family MRP56_RS18550 PF00501 AMP-binding enzyme MRP56_RS18560 PF04262 Glutamate-cysteine ligase MRP56_RS18565 PF05193 Peptidase M16 inactive domain MRP56_RS18565 PF00675 Insulinase (Peptidase family M16) MRP56_RS18570 PF09335 SNARE associated Golgi protein MRP56_RS18575 PF00698 Acyl transferase domain MRP56_RS18575 PF14765 Polyketide synthase dehydratase MRP56_RS18575 PF00550 Phosphopantetheine attachment site MRP56_RS18575 PF08659 KR domain MRP56_RS18575 PF02801 Beta-ketoacyl synthase, C-terminal domain MRP56_RS18575 PF00109 Beta-ketoacyl synthase, N-terminal domain MRP56_RS18575 PF16197 Ketoacyl-synthetase C-terminal extension MRP56_RS18575 PF08990 Erythronolide synthase docking MRP56_RS18575 PF08240 Alcohol dehydrogenase GroES-like domain MRP56_RS18595 PF00175 Oxidoreductase NAD-binding domain MRP56_RS18595 PF00970 Oxidoreductase FAD-binding domain MRP56_RS18600 PF03948 Ribosomal protein L9, C-terminal domain MRP56_RS18600 PF01281 Ribosomal protein L9, N-terminal domain MRP56_RS18605 PF01084 Ribosomal protein S18 MRP56_RS18610 PF01250 Ribosomal protein S6 MRP56_RS18615 PF01566 Natural resistance-associated macrophage protein MRP56_RS18620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MRP56_RS18620 PF01411 tRNA synthetases class II (A) MRP56_RS18620 PF02272 DHHA1 domain MRP56_RS18635 PF13673 Acetyltransferase (GNAT) domain MRP56_RS18645 PF08032 RNA 2'-O ribose methyltransferase substrate binding MRP56_RS18645 PF00588 SpoU rRNA Methylase family MRP56_RS18650 PF08461 Ribonuclease R winged-helix domain MRP56_RS18650 PF00773 RNB domain MRP56_RS18650 PF17876 Cold shock domain MRP56_RS18650 PF00575 S1 RNA binding domain MRP56_RS18650 PF08206 Ribonuclease B OB domain MRP56_RS18655 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS18660 PF02664 S-Ribosylhomocysteinase (LuxS) MRP56_RS18670 PF00543 Nitrogen regulatory protein P-II MRP56_RS18675 PF00795 Carbon-nitrogen hydrolase MRP56_RS18675 PF02540 NAD synthase MRP56_RS18695 PF05598 Transposase domain (DUF772) MRP56_RS18695 PF01609 Transposase DDE domain MRP56_RS18720 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MRP56_RS18720 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS18725 PF02401 LytB protein MRP56_RS18730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MRP56_RS18735 PF01252 Signal peptidase (SPase) II MRP56_RS18740 PF00133 tRNA synthetases class I (I, L, M and V) MRP56_RS18740 PF06827 Zinc finger found in FPG and IleRS MRP56_RS18740 PF08264 Anticodon-binding domain of tRNA MRP56_RS18745 PF06574 FAD synthetase MRP56_RS18745 PF01687 Riboflavin kinase MRP56_RS18755 PF03023 Lipid II flippase MurJ MRP56_RS18760 PF01649 Ribosomal protein S20 MRP56_RS18765 PF01022 Bacterial regulatory protein, arsR family MRP56_RS18770 PF03466 LysR substrate binding domain MRP56_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS18780 PF06965 Na+/H+ antiporter 1 MRP56_RS18785 PF00303 Thymidylate synthase MRP56_RS18790 PF01790 Prolipoprotein diacylglyceryl transferase MRP56_RS18795 PF02896 PEP-utilising enzyme, TIM barrel domain MRP56_RS18795 PF00391 PEP-utilising enzyme, mobile domain MRP56_RS18795 PF05524 PEP-utilising enzyme, N-terminal MRP56_RS18795 PF01590 GAF domain MRP56_RS18800 PF00293 NUDIX domain MRP56_RS18805 PF02976 DNA mismatch repair enzyme MutH MRP56_RS18815 PF01245 Ribosomal protein L19 MRP56_RS18820 PF01746 tRNA (Guanine-1)-methyltransferase MRP56_RS18825 PF05239 PRC-barrel domain MRP56_RS18825 PF01782 RimM N-terminal domain MRP56_RS18830 PF00886 Ribosomal protein S16 MRP56_RS18835 PF00448 SRP54-type protein, GTPase domain MRP56_RS18835 PF02881 SRP54-type protein, helical bundle domain MRP56_RS18835 PF02978 Signal peptide binding domain MRP56_RS18840 PF01578 Cytochrome C assembly protein MRP56_RS18845 PF00571 CBS domain MRP56_RS18845 PF03471 Transporter associated domain MRP56_RS18845 PF01595 Cyclin M transmembrane N-terminal domain MRP56_RS18850 PF02082 Transcriptional regulator MRP56_RS18855 PF00042 Globin MRP56_RS18855 PF00175 Oxidoreductase NAD-binding domain MRP56_RS18855 PF00970 Oxidoreductase FAD-binding domain MRP56_RS18860 PF08238 Sel1 repeat MRP56_RS18865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MRP56_RS18865 PF00056 lactate/malate dehydrogenase, NAD binding domain MRP56_RS18870 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS18875 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS18880 PF00497 Bacterial extracellular solute-binding proteins, family 3 MRP56_RS18885 PF00005 ABC transporter MRP56_RS18890 PF02863 Arginine repressor, C-terminal domain MRP56_RS18890 PF01316 Arginine repressor, DNA binding domain MRP56_RS18895 PF04261 Dyp-type peroxidase family MRP56_RS18900 PF00005 ABC transporter MRP56_RS18900 PF08402 TOBE domain MRP56_RS18910 PF13416 Bacterial extracellular solute-binding protein MRP56_RS18915 PF00543 Nitrogen regulatory protein P-II MRP56_RS18920 PF00472 RF-1 domain MRP56_RS18925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MRP56_RS18925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MRP56_RS18930 PF07670 Nucleoside recognition MRP56_RS18930 PF07662 Na+ dependent nucleoside transporter C-terminus MRP56_RS18930 PF01773 Na+ dependent nucleoside transporter N-terminus MRP56_RS18935 PF03466 LysR substrate binding domain MRP56_RS18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS18940 PF00255 Glutathione peroxidase MRP56_RS18950 PF02595 Glycerate kinase family MRP56_RS18955 PF02447 GntP family permease MRP56_RS18960 PF17853 GGDEF-like domain MRP56_RS18960 PF13556 PucR C-terminal helix-turn-helix domain MRP56_RS18960 PF05651 Putative sugar diacid recognition MRP56_RS18970 PF06062 Uncharacterised protein family (UPF0231) MRP56_RS18985 PF08447 PAS fold MRP56_RS18985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS18990 PF03372 Endonuclease/Exonuclease/phosphatase family MRP56_RS19005 PF00270 DEAD/DEAH box helicase MRP56_RS19005 PF00271 Helicase conserved C-terminal domain MRP56_RS19015 PF08534 Redoxin MRP56_RS19020 PF00403 Heavy-metal-associated domain MRP56_RS19040 PF02583 Metal-sensitive transcriptional repressor MRP56_RS19045 PF00155 Aminotransferase class I and II MRP56_RS19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS19050 PF03466 LysR substrate binding domain MRP56_RS19060 PF04055 Radical SAM superfamily MRP56_RS19065 PF11230 Protein of unknown function (DUF3029) MRP56_RS19085 PF07676 WD40-like Beta Propeller Repeat MRP56_RS19085 PF03572 Peptidase family S41 MRP56_RS19085 PF14684 Tricorn protease C1 domain MRP56_RS19085 PF14685 Tricorn protease PDZ domain MRP56_RS19115 PF08269 Cache domain MRP56_RS19115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS19120 PF18416 N-acetylglucosamine binding protein domain 2 MRP56_RS19120 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MRP56_RS19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS19125 PF03466 LysR substrate binding domain MRP56_RS19130 PF12857 TOBE-like domain MRP56_RS19130 PF00005 ABC transporter MRP56_RS19135 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS19140 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS19155 PF13194 Domain of unknown function (DUF4010) MRP56_RS19160 PF12464 Maltose acetyltransferase MRP56_RS19160 PF14602 Hexapeptide repeat of succinyl-transferase MRP56_RS19185 PF14698 Argininosuccinate lyase C-terminal MRP56_RS19185 PF00206 Lyase MRP56_RS19190 PF00764 Arginosuccinate synthase MRP56_RS19195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MRP56_RS19195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MRP56_RS19200 PF00696 Amino acid kinase family MRP56_RS19205 PF01118 Semialdehyde dehydrogenase, NAD binding domain MRP56_RS19205 PF02774 Semialdehyde dehydrogenase, dimerisation domain MRP56_RS19210 PF07687 Peptidase dimerisation domain MRP56_RS19210 PF01546 Peptidase family M20/M25/M40 MRP56_RS19215 PF00311 Phosphoenolpyruvate carboxylase MRP56_RS19220 PF00696 Amino acid kinase family MRP56_RS19220 PF00742 Homoserine dehydrogenase MRP56_RS19220 PF03447 Homoserine dehydrogenase, NAD binding domain MRP56_RS19225 PF01053 Cys/Met metabolism PLP-dependent enzyme MRP56_RS19230 PF01340 Met Apo-repressor, MetJ MRP56_RS19235 PF06445 GyrI-like small molecule binding domain MRP56_RS19235 PF12833 Helix-turn-helix domain MRP56_RS19240 PF01588 Putative tRNA binding domain MRP56_RS19245 PF03222 Tryptophan/tyrosine permease family MRP56_RS19250 PF00459 Inositol monophosphatase family MRP56_RS19255 PF00293 NUDIX domain MRP56_RS19260 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS19265 PF01479 S4 domain MRP56_RS19265 PF00579 tRNA synthetases class I (W and Y) MRP56_RS19270 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS19275 PF01203 Type II secretion system (T2SS), protein N MRP56_RS19280 PF04612 Type II secretion system (T2SS), protein M MRP56_RS19285 PF12693 GspL periplasmic domain MRP56_RS19285 PF05134 Type II secretion system (T2SS), protein L MRP56_RS19290 PF03934 Type II secretion system (T2SS), protein K MRP56_RS19295 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS19295 PF11612 Type II secretion system (T2SS), protein J MRP56_RS19300 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS19300 PF02501 Type II secretion system (T2SS), protein I MRP56_RS19305 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS19305 PF12019 Type II transport protein GspH MRP56_RS19310 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS19310 PF08334 Type II secretion system (T2SS), protein G MRP56_RS19315 PF00482 Type II secretion system (T2SS), protein F MRP56_RS19320 PF00437 Type II/IV secretion system protein MRP56_RS19325 PF00263 Bacterial type II and III secretion system protein MRP56_RS19325 PF03958 Bacterial type II/III secretion system short domain MRP56_RS19330 PF11356 Type II secretion system protein C MRP56_RS19335 PF01479 S4 domain MRP56_RS19340 PF01430 Hsp33 protein MRP56_RS19345 PF01293 Phosphoenolpyruvate carboxykinase MRP56_RS19350 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS19355 PF00557 Metallopeptidase family M24 MRP56_RS19355 PF01321 Creatinase/Prolidase N-terminal domain MRP56_RS19360 PF11756 Nitrous oxide-stimulated promoter MRP56_RS19365 PF00583 Acetyltransferase (GNAT) family MRP56_RS19370 PF05433 Glycine zipper 2TM domain MRP56_RS19375 PF00149 Calcineurin-like phosphoesterase MRP56_RS19375 PF02872 5'-nucleotidase, C-terminal domain MRP56_RS19380 PF01810 LysE type translocator MRP56_RS19385 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS19385 PF03472 Autoinducer binding domain MRP56_RS19390 PF00765 Autoinducer synthase MRP56_RS19395 PF03466 LysR substrate binding domain MRP56_RS19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS19400 PF00773 RNB domain MRP56_RS19400 PF08206 Ribonuclease B OB domain MRP56_RS19400 PF17876 Cold shock domain MRP56_RS19405 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS19415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MRP56_RS19415 PF02378 Phosphotransferase system, EIIC MRP56_RS19415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS19420 PF08125 Mannitol dehydrogenase C-terminal domain MRP56_RS19420 PF01232 Mannitol dehydrogenase Rossmann domain MRP56_RS19425 PF05068 Mannitol repressor MRP56_RS19430 PF03471 Transporter associated domain MRP56_RS19430 PF00999 Sodium/hydrogen exchanger family MRP56_RS19430 PF02080 TrkA-C domain MRP56_RS19450 PF01544 CorA-like Mg2+ transporter protein MRP56_RS19455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MRP56_RS19470 PF04307 LexA-binding, inner membrane-associated putative hydrolase MRP56_RS19475 PF01773 Na+ dependent nucleoside transporter N-terminus MRP56_RS19475 PF07670 Nucleoside recognition MRP56_RS19475 PF07662 Na+ dependent nucleoside transporter C-terminus MRP56_RS19485 PF00271 Helicase conserved C-terminal domain MRP56_RS19485 PF00270 DEAD/DEAH box helicase MRP56_RS19485 PF03880 DbpA RNA binding domain MRP56_RS19510 PF01040 UbiA prenyltransferase family MRP56_RS19515 PF00425 chorismate binding enzyme MRP56_RS19520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MRP56_RS19520 PF16582 Middle domain of thiamine pyrophosphate MRP56_RS19520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MRP56_RS19525 PF12697 Alpha/beta hydrolase family MRP56_RS19530 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS19535 PF13378 Enolase C-terminal domain-like MRP56_RS19540 PF00501 AMP-binding enzyme MRP56_RS19550 PF00419 Fimbrial protein MRP56_RS19555 PF00419 Fimbrial protein MRP56_RS19560 PF02753 Pili assembly chaperone PapD, C-terminal domain MRP56_RS19560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MRP56_RS19565 PF13953 PapC C-terminal domain MRP56_RS19565 PF00577 Outer membrane usher protein MRP56_RS19565 PF13954 PapC N-terminal domain MRP56_RS19575 PF00419 Fimbrial protein MRP56_RS19585 PF01752 Collagenase MRP56_RS19585 PF08453 Peptidase family M9 N-terminal MRP56_RS19590 PF02698 DUF218 domain MRP56_RS19595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MRP56_RS19595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MRP56_RS19605 PF00561 alpha/beta hydrolase fold MRP56_RS19610 PF03280 Proteobacterial lipase chaperone protein MRP56_RS19625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MRP56_RS19625 PF12793 Sugar transport-related sRNA regulator N-term MRP56_RS19635 PF01053 Cys/Met metabolism PLP-dependent enzyme MRP56_RS19645 PF00465 Iron-containing alcohol dehydrogenase MRP56_RS19660 PF03577 Peptidase family C69 MRP56_RS19665 PF00106 short chain dehydrogenase MRP56_RS19685 PF02308 MgtC family MRP56_RS19690 PF00128 Alpha amylase, catalytic domain MRP56_RS19690 PF02903 Alpha amylase, N-terminal ig-like domain MRP56_RS19690 PF16657 Maltogenic Amylase, C-terminal domain MRP56_RS19705 PF00884 Sulfatase MRP56_RS19710 PF01037 Lrp/AsnC ligand binding domain MRP56_RS19720 PF04204 Homoserine O-succinyltransferase MRP56_RS19725 PF01966 HD domain MRP56_RS19730 PF02464 Competence-damaged protein MRP56_RS19730 PF00994 Probable molybdopterin binding domain MRP56_RS19740 PF00005 ABC transporter MRP56_RS19760 PF07722 Peptidase C26 MRP56_RS19770 PF00027 Cyclic nucleotide-binding domain MRP56_RS19770 PF13545 Crp-like helix-turn-helix domain MRP56_RS19780 PF13419 Haloacid dehalogenase-like hydrolase MRP56_RS19785 PF00589 Phage integrase family MRP56_RS19785 PF02899 Phage integrase, N-terminal SAM-like domain MRP56_RS19795 PF01678 Diaminopimelate epimerase MRP56_RS19800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MRP56_RS19800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MRP56_RS19810 PF01491 Frataxin-like domain MRP56_RS19815 PF02230 Phospholipase/Carboxylesterase MRP56_RS19820 PF12633 Adenylate cyclase NT domain MRP56_RS19820 PF01295 Adenylate cyclase, class-I MRP56_RS19825 PF03900 Porphobilinogen deaminase, C-terminal domain MRP56_RS19825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MRP56_RS19830 PF02602 Uroporphyrinogen-III synthase HemD MRP56_RS19835 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MRP56_RS19845 PF03692 Putative zinc- or iron-chelating domain MRP56_RS19850 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MRP56_RS19865 PF00593 TonB dependent receptor MRP56_RS19865 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS19890 PF01638 HxlR-like helix-turn-helix MRP56_RS19895 PF08803 Putative mono-oxygenase ydhR MRP56_RS19910 PF06055 Exopolysaccharide synthesis, ExoD MRP56_RS19920 PF17151 Periplasmic sensor domain MRP56_RS19920 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS19940 PF13036 Peptidoglycan-synthase activator LpoB MRP56_RS19955 PF04055 Radical SAM superfamily MRP56_RS19955 PF06968 Biotin and Thiamin Synthesis associated domain MRP56_RS19960 PF05690 Thiazole biosynthesis protein ThiG MRP56_RS19970 PF00899 ThiF family MRP56_RS19975 PF02581 Thiamine monophosphate synthase MRP56_RS19980 PF01964 Radical SAM ThiC family MRP56_RS19980 PF13667 ThiC-associated domain MRP56_RS19985 PF01117 Aerolysin toxin MRP56_RS19985 PF03440 Aerolysin/Pertussis toxin (APT) domain MRP56_RS19990 PF17425 Arylsulfotransferase Ig-like domain MRP56_RS19990 PF05935 Arylsulfotransferase (ASST) MRP56_RS20005 PF00072 Response regulator receiver domain MRP56_RS20005 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS20010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS20015 PF05525 Branched-chain amino acid transport protein MRP56_RS20020 PF18030 RimK PreATP-grasp domain MRP56_RS20020 PF08443 RimK-like ATP-grasp domain MRP56_RS20025 PF02574 Homocysteine S-methyltransferase MRP56_RS20025 PF00809 Pterin binding enzyme MRP56_RS20025 PF02965 Vitamin B12 dependent methionine synthase, activation domain MRP56_RS20025 PF02607 B12 binding domain MRP56_RS20025 PF02310 B12 binding domain MRP56_RS20030 PF00999 Sodium/hydrogen exchanger family MRP56_RS20045 PF08668 HDOD domain MRP56_RS20055 PF04228 Putative neutral zinc metallopeptidase MRP56_RS20060 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MRP56_RS20075 PF08447 PAS fold MRP56_RS20075 PF13426 PAS domain MRP56_RS20075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS20085 PF13581 Histidine kinase-like ATPase domain MRP56_RS20090 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS20090 PF00672 HAMP domain MRP56_RS20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS20090 PF01627 Hpt domain MRP56_RS20090 PF00072 Response regulator receiver domain MRP56_RS20090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MRP56_RS20095 PF00072 Response regulator receiver domain MRP56_RS20105 PF07690 Major Facilitator Superfamily MRP56_RS20110 PF01914 MarC family integral membrane protein MRP56_RS20120 PF13580 SIS domain MRP56_RS20125 PF00367 phosphotransferase system, EIIB MRP56_RS20125 PF02378 Phosphotransferase system, EIIC MRP56_RS20140 PF01380 SIS domain MRP56_RS20140 PF01418 Helix-turn-helix domain, rpiR family MRP56_RS20145 PF01523 Putative modulator of DNA gyrase MRP56_RS20150 PF00795 Carbon-nitrogen hydrolase MRP56_RS20160 PF13502 AsmA-like C-terminal region MRP56_RS20160 PF13116 Protein of unknown function MRP56_RS20165 PF10150 Ribonuclease E/G family MRP56_RS20165 PF00575 S1 RNA binding domain MRP56_RS20170 PF02545 Maf-like protein MRP56_RS20175 PF04093 rod shape-determining protein MreD MRP56_RS20180 PF04085 rod shape-determining protein MreC MRP56_RS20210 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS20210 PF00114 Pilin (bacterial filament) MRP56_RS20220 PF07963 Prokaryotic N-terminal methylation motif MRP56_RS20230 PF00482 Type II secretion system (T2SS), protein F MRP56_RS20235 PF00437 Type II/IV secretion system protein MRP56_RS20235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MRP56_RS20250 PF03958 Bacterial type II/III secretion system short domain MRP56_RS20250 PF00263 Bacterial type II and III secretion system protein MRP56_RS20280 PF17157 Gammaproteobacterial periplasmic sensor domain MRP56_RS20280 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS20280 PF00563 EAL domain MRP56_RS20285 PF12792 CSS motif domain associated with EAL MRP56_RS20285 PF00563 EAL domain MRP56_RS20290 PF01699 Sodium/calcium exchanger protein MRP56_RS20295 PF00221 Aromatic amino acid lyase MRP56_RS20300 PF01175 Urocanase Rossmann-like domain MRP56_RS20300 PF17392 Urocanase C-terminal domain MRP56_RS20300 PF17391 Urocanase N-terminal domain MRP56_RS20305 PF00491 Arginase family MRP56_RS20310 PF01979 Amidohydrolase family MRP56_RS20315 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS20315 PF07702 UTRA domain MRP56_RS20320 PF00484 Carbonic anhydrase MRP56_RS20325 PF00140 Sigma-70 factor, region 1.2 MRP56_RS20325 PF04542 Sigma-70 region 2 MRP56_RS20325 PF04545 Sigma-70, region 4 MRP56_RS20330 PF18075 FtsX extracellular domain MRP56_RS20335 PF00005 ABC transporter MRP56_RS20340 PF00448 SRP54-type protein, GTPase domain MRP56_RS20340 PF02881 SRP54-type protein, helical bundle domain MRP56_RS20355 PF07226 Protein of unknown function (DUF1422) MRP56_RS20360 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS20370 PF13091 PLD-like domain MRP56_RS20380 PF01464 Transglycosylase SLT domain MRP56_RS20390 PF02416 mttA/Hcf106 family MRP56_RS20395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS20395 PF03466 LysR substrate binding domain MRP56_RS20400 PF01914 MarC family integral membrane protein MRP56_RS20405 PF10678 Protein of unknown function (DUF2492) MRP56_RS20410 PF00375 Sodium:dicarboxylate symporter family MRP56_RS20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS20420 PF03466 LysR substrate binding domain MRP56_RS20425 PF13533 Biotin-lipoyl like MRP56_RS20430 PF07690 Major Facilitator Superfamily MRP56_RS20435 PF07947 YhhN family MRP56_RS20455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MRP56_RS20455 PF00326 Prolyl oligopeptidase family MRP56_RS20470 PF00106 short chain dehydrogenase MRP56_RS20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS20475 PF03466 LysR substrate binding domain MRP56_RS20480 PF02525 Flavodoxin-like fold MRP56_RS20485 PF00999 Sodium/hydrogen exchanger family MRP56_RS20485 PF02254 TrkA-N domain MRP56_RS20525 PF01196 Ribosomal protein L17 MRP56_RS20530 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MRP56_RS20530 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MRP56_RS20530 PF01000 RNA polymerase Rpb3/RpoA insert domain MRP56_RS20535 PF00163 Ribosomal protein S4/S9 N-terminal domain MRP56_RS20535 PF01479 S4 domain MRP56_RS20540 PF00411 Ribosomal protein S11 MRP56_RS20545 PF00416 Ribosomal protein S13/S18 MRP56_RS20550 PF00444 Ribosomal protein L36 MRP56_RS20555 PF00344 SecY translocase MRP56_RS20560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MRP56_RS20565 PF00327 Ribosomal protein L30p/L7e MRP56_RS20570 PF03719 Ribosomal protein S5, C-terminal domain MRP56_RS20570 PF00333 Ribosomal protein S5, N-terminal domain MRP56_RS20575 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MRP56_RS20580 PF00347 Ribosomal protein L6 MRP56_RS20585 PF00410 Ribosomal protein S8 MRP56_RS20590 PF00253 Ribosomal protein S14p/S29e MRP56_RS20595 PF00281 Ribosomal protein L5 MRP56_RS20595 PF00673 ribosomal L5P family C-terminus MRP56_RS20600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MRP56_RS20600 PF00467 KOW motif MRP56_RS20605 PF00238 Ribosomal protein L14p/L23e MRP56_RS20610 PF00366 Ribosomal protein S17 MRP56_RS20615 PF00831 Ribosomal L29 protein MRP56_RS20620 PF00252 Ribosomal protein L16p/L10e MRP56_RS20625 PF07650 KH domain MRP56_RS20625 PF00189 Ribosomal protein S3, C-terminal domain MRP56_RS20630 PF00237 Ribosomal protein L22p/L17e MRP56_RS20635 PF00203 Ribosomal protein S19 MRP56_RS20640 PF00181 Ribosomal Proteins L2, RNA binding domain MRP56_RS20640 PF03947 Ribosomal Proteins L2, C-terminal domain MRP56_RS20645 PF00276 Ribosomal protein L23 MRP56_RS20650 PF00573 Ribosomal protein L4/L1 family MRP56_RS20655 PF00297 Ribosomal protein L3 MRP56_RS20660 PF00338 Ribosomal protein S10p/S20e MRP56_RS20670 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS20670 PF00672 HAMP domain MRP56_RS20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS20675 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS20675 PF00072 Response regulator receiver domain MRP56_RS20680 PF03449 Transcription elongation factor, N-terminal MRP56_RS20680 PF01272 Transcription elongation factor, GreA/GreB, C-term MRP56_RS20685 PF16921 Tex protein YqgF-like domain MRP56_RS20685 PF09371 Tex-like protein N-terminal domain MRP56_RS20685 PF00575 S1 RNA binding domain MRP56_RS20685 PF17674 HHH domain MRP56_RS20705 PF00561 alpha/beta hydrolase fold MRP56_RS20710 PF00156 Phosphoribosyl transferase domain MRP56_RS20715 PF01521 Iron-sulphur cluster biosynthesis MRP56_RS20715 PF01106 NifU-like domain MRP56_RS20720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MRP56_RS20720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MRP56_RS20725 PF02556 Preprotein translocase subunit SecB MRP56_RS20730 PF00581 Rhodanese-like domain MRP56_RS20735 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MRP56_RS20735 PF01676 Metalloenzyme superfamily MRP56_RS20740 PF01551 Peptidase family M23 MRP56_RS20750 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS20750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS20755 PF01081 KDPG and KHG aldolase MRP56_RS20760 PF00920 Dehydratase family MRP56_RS20765 PF01202 Shikimate kinase MRP56_RS20770 PF02447 GntP family permease MRP56_RS20775 PF13091 PLD-like domain MRP56_RS20780 PF00270 DEAD/DEAH box helicase MRP56_RS20780 PF17191 RecG wedge domain MRP56_RS20780 PF00271 Helicase conserved C-terminal domain MRP56_RS20790 PF00583 Acetyltransferase (GNAT) family MRP56_RS20790 PF09500 Putative thioesterase (yiiD_Cterm) MRP56_RS20800 PF02580 D-Tyr-tRNA(Tyr) deacylase MRP56_RS20810 PF03631 Virulence factor BrkB MRP56_RS20815 PF00679 Elongation factor G C-terminus MRP56_RS20815 PF00009 Elongation factor Tu GTP binding domain MRP56_RS20815 PF03144 Elongation factor Tu domain 2 MRP56_RS20820 PF03951 Glutamine synthetase, beta-Grasp domain MRP56_RS20820 PF00120 Glutamine synthetase, catalytic domain MRP56_RS20830 PF00989 PAS fold MRP56_RS20830 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS20835 PF02954 Bacterial regulatory protein, Fis family MRP56_RS20835 PF00072 Response regulator receiver domain MRP56_RS20835 PF00158 Sigma-54 interaction domain MRP56_RS20840 PF00962 Adenosine/AMP deaminase MRP56_RS20845 PF06969 HemN C-terminal domain MRP56_RS20845 PF04055 Radical SAM superfamily MRP56_RS20850 PF10675 Protein of unknown function (DUF2489) MRP56_RS20855 PF04220 Der GTPase activator (YihI) MRP56_RS20860 PF00034 Cytochrome c MRP56_RS20865 PF01926 50S ribosome-binding GTPase MRP56_RS20870 PF07369 Protein of unknown function (DUF1488) MRP56_RS20875 PF01488 Shikimate / quinate 5-dehydrogenase MRP56_RS20875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MRP56_RS20875 PF08501 Shikimate dehydrogenase substrate binding domain MRP56_RS20880 PF01218 Coproporphyrinogen III oxidase MRP56_RS20885 PF01300 Telomere recombination MRP56_RS20890 PF00731 AIR carboxylase MRP56_RS20895 PF01396 Topoisomerase DNA binding C4 zinc finger MRP56_RS20900 PF04361 Protein of unknown function (DUF494) MRP56_RS20905 PF02481 DNA recombination-mediator protein A MRP56_RS20905 PF17782 DprA winged helix domain MRP56_RS20915 PF01327 Polypeptide deformylase MRP56_RS20920 PF02911 Formyl transferase, C-terminal domain MRP56_RS20920 PF00551 Formyl transferase MRP56_RS20925 PF01029 NusB family MRP56_RS20925 PF01189 16S rRNA methyltransferase RsmB/F MRP56_RS20930 PF02080 TrkA-C domain MRP56_RS20930 PF02254 TrkA-N domain MRP56_RS20935 PF02386 Cation transport protein MRP56_RS20940 PF02646 RmuC family MRP56_RS20955 PF02082 Transcriptional regulator MRP56_RS20960 PF00294 pfkB family carbohydrate kinase MRP56_RS20965 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MRP56_RS20965 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MRP56_RS20970 PF00117 Glutamine amidotransferase class-I MRP56_RS20970 PF00958 GMP synthase C terminal domain MRP56_RS20970 PF02540 NAD synthase MRP56_RS20975 PF00171 Aldehyde dehydrogenase family MRP56_RS20980 PF00202 Aminotransferase class-III MRP56_RS20985 PF01381 Helix-turn-helix MRP56_RS20985 PF07883 Cupin domain MRP56_RS20990 PF00171 Aldehyde dehydrogenase family MRP56_RS21000 PF00892 EamA-like transporter family MRP56_RS21005 PF12833 Helix-turn-helix domain MRP56_RS21010 PF01810 LysE type translocator MRP56_RS21015 PF00689 Cation transporting ATPase, C-terminus MRP56_RS21015 PF00690 Cation transporter/ATPase, N-terminus MRP56_RS21020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS21020 PF00672 HAMP domain MRP56_RS21020 PF12729 Four helix bundle sensory module for signal transduction MRP56_RS21025 PF04143 Sulphur transport MRP56_RS21030 PF01810 LysE type translocator MRP56_RS21040 PF06206 CpeT/CpcT family (DUF1001) MRP56_RS21065 PF14001 YdfZ protein MRP56_RS21085 PF03466 LysR substrate binding domain MRP56_RS21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS21105 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MRP56_RS21110 PF00580 UvrD/REP helicase N-terminal domain MRP56_RS21110 PF13361 UvrD-like helicase C-terminal domain MRP56_RS21125 PF02608 ABC transporter substrate-binding protein PnrA-like MRP56_RS21130 PF00005 ABC transporter MRP56_RS21135 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS21140 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS21145 PF03466 LysR substrate binding domain MRP56_RS21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS21150 PF08240 Alcohol dehydrogenase GroES-like domain MRP56_RS21150 PF00107 Zinc-binding dehydrogenase MRP56_RS21155 PF00756 Putative esterase MRP56_RS21165 PF12867 DinB superfamily MRP56_RS21165 PF03781 Sulfatase-modifying factor enzyme 1 MRP56_RS21170 PF13593 SBF-like CPA transporter family (DUF4137) MRP56_RS21175 PF13520 Amino acid permease MRP56_RS21180 PF01588 Putative tRNA binding domain MRP56_RS21185 PF13520 Amino acid permease MRP56_RS21190 PF04074 YhcH/YjgK/YiaL MRP56_RS21195 PF16353 Domain of unknown function(DUF4981) MRP56_RS21195 PF02929 Beta galactosidase small chain MRP56_RS21195 PF02837 Glycosyl hydrolases family 2, sugar binding domain MRP56_RS21195 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MRP56_RS21195 PF00703 Glycosyl hydrolases family 2 MRP56_RS21200 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS21235 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS21240 PF01367 5'-3' exonuclease, C-terminal SAM fold MRP56_RS21240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MRP56_RS21240 PF00476 DNA polymerase family A MRP56_RS21240 PF01612 3'-5' exonuclease MRP56_RS21250 PF06005 Cell division protein ZapB MRP56_RS21260 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS21260 PF06426 Serine acetyltransferase, N-terminal MRP56_RS21265 PF01545 Cation efflux family MRP56_RS21265 PF16916 Dimerisation domain of Zinc Transporter MRP56_RS21270 PF00072 Response regulator receiver domain MRP56_RS21270 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS21275 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS21275 PF00672 HAMP domain MRP56_RS21275 PF16527 Two-component sensor protein CpxA, periplasmic domain MRP56_RS21280 PF00588 SpoU rRNA Methylase family MRP56_RS21285 PF01554 MatE MRP56_RS21290 PF02630 SCO1/SenC MRP56_RS21300 PF01726 LexA DNA binding domain MRP56_RS21300 PF00717 Peptidase S24-like MRP56_RS21305 PF01553 Acyltransferase MRP56_RS21310 PF01040 UbiA prenyltransferase family MRP56_RS21315 PF04345 Chorismate lyase MRP56_RS21320 PF03748 Flagellar basal body-associated protein FliL MRP56_RS21335 PF08240 Alcohol dehydrogenase GroES-like domain MRP56_RS21335 PF00107 Zinc-binding dehydrogenase MRP56_RS21340 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS21340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MRP56_RS21345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MRP56_RS21355 PF03611 PTS system sugar-specific permease component MRP56_RS21360 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MRP56_RS21365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MRP56_RS21370 PF00535 Glycosyl transferase family 2 MRP56_RS21375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MRP56_RS21380 PF01467 Cytidylyltransferase-like MRP56_RS21385 PF04393 Protein of unknown function (DUF535) MRP56_RS21390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MRP56_RS21390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MRP56_RS21390 PF06827 Zinc finger found in FPG and IleRS MRP56_RS21400 PF00471 Ribosomal protein L33 MRP56_RS21405 PF00830 Ribosomal L28 family MRP56_RS21410 PF04002 RadC-like JAB domain MRP56_RS21415 PF02441 Flavoprotein MRP56_RS21415 PF04127 DNA / pantothenate metabolism flavoprotein MRP56_RS21420 PF00692 dUTPase MRP56_RS21425 PF00440 Bacterial regulatory proteins, tetR family MRP56_RS21430 PF05552 Conserved TM helix MRP56_RS21430 PF00924 Mechanosensitive ion channel MRP56_RS21440 PF00342 Phosphoglucose isomerase MRP56_RS21445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MRP56_RS21445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MRP56_RS21450 PF03466 LysR substrate binding domain MRP56_RS21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS21465 PF13380 CoA binding domain MRP56_RS21465 PF13607 Succinyl-CoA ligase like flavodoxin domain MRP56_RS21465 PF00583 Acetyltransferase (GNAT) family MRP56_RS21495 PF12724 Flavodoxin domain MRP56_RS21500 PF02386 Cation transport protein MRP56_RS21505 PF09186 Domain of unknown function (DUF1949) MRP56_RS21505 PF01205 Uncharacterized protein family UPF0029 MRP56_RS21510 PF00557 Metallopeptidase family M24 MRP56_RS21515 PF00501 AMP-binding enzyme MRP56_RS21515 PF13193 AMP-binding enzyme C-terminal domain MRP56_RS21520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MRP56_RS21520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MRP56_RS21520 PF00378 Enoyl-CoA hydratase/isomerase MRP56_RS21525 PF02803 Thiolase, C-terminal domain MRP56_RS21525 PF00108 Thiolase, N-terminal domain MRP56_RS21530 PF00072 Response regulator receiver domain MRP56_RS21530 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS21535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS21535 PF00672 HAMP domain MRP56_RS21535 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS21540 PF01547 Bacterial extracellular solute-binding protein MRP56_RS21550 PF01206 Sulfurtransferase TusA MRP56_RS21555 PF01042 Endoribonuclease L-PSP MRP56_RS21560 PF00691 OmpA family MRP56_RS21560 PF13488 Glycine zipper MRP56_RS21565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MRP56_RS21565 PF00672 HAMP domain MRP56_RS21565 PF02743 Cache domain MRP56_RS21570 PF03352 Methyladenine glycosylase MRP56_RS21575 PF02091 Glycyl-tRNA synthetase alpha subunit MRP56_RS21580 PF02092 Glycyl-tRNA synthetase beta subunit MRP56_RS21580 PF05746 DALR anticodon binding domain MRP56_RS21590 PF01202 Shikimate kinase MRP56_RS21600 PF03466 LysR substrate binding domain MRP56_RS21600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MRP56_RS21605 PF02525 Flavodoxin-like fold MRP56_RS21620 PF03222 Tryptophan/tyrosine permease family MRP56_RS21625 PF12801 4Fe-4S binding domain MRP56_RS21635 PF18113 Rubredoxin binding C-terminal domain MRP56_RS21635 PF07992 Pyridine nucleotide-disulphide oxidoreductase MRP56_RS21640 PF00753 Metallo-beta-lactamase superfamily MRP56_RS21640 PF00258 Flavodoxin MRP56_RS21640 PF00301 Rubredoxin MRP56_RS21645 PF01590 GAF domain MRP56_RS21645 PF00158 Sigma-54 interaction domain MRP56_RS21650 PF00392 Bacterial regulatory proteins, gntR family MRP56_RS21650 PF07702 UTRA domain MRP56_RS21655 PF00367 phosphotransferase system, EIIB MRP56_RS21655 PF02378 Phosphotransferase system, EIIC MRP56_RS21660 PF11975 Family 4 glycosyl hydrolase C-terminal domain MRP56_RS21660 PF02056 Family 4 glycosyl hydrolase MRP56_RS21665 PF00356 Bacterial regulatory proteins, lacI family MRP56_RS21670 PF13458 Periplasmic binding protein MRP56_RS21675 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS21680 PF11862 Domain of unknown function (DUF3382) MRP56_RS21680 PF02653 Branched-chain amino acid transport system / permease component MRP56_RS21685 PF12399 Branched-chain amino acid ATP-binding cassette transporter MRP56_RS21685 PF00005 ABC transporter MRP56_RS21690 PF00005 ABC transporter MRP56_RS21705 PF00581 Rhodanese-like domain MRP56_RS21710 PF01694 Rhomboid family MRP56_RS21710 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MRP56_RS21715 PF12262 Bacterial virulence factor lipase N-terminal MRP56_RS21720 PF04380 Membrane fusogenic activity MRP56_RS21725 PF00175 Oxidoreductase NAD-binding domain MRP56_RS21730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MRP56_RS21740 PF07497 Rho termination factor, RNA-binding domain MRP56_RS21740 PF07498 Rho termination factor, N-terminal domain MRP56_RS21740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MRP56_RS21745 PF00085 Thioredoxin MRP56_RS21750 PF00271 Helicase conserved C-terminal domain MRP56_RS21750 PF00270 DEAD/DEAH box helicase MRP56_RS21755 PF02541 Ppx/GppA phosphatase family MRP56_RS21765 PF04445 Putative SAM-dependent methyltransferase MRP56_RS21770 PF00563 EAL domain MRP56_RS21770 PF03707 Bacterial signalling protein N terminal repeat MRP56_RS21770 PF00990 Diguanylate cyclase, GGDEF domain MRP56_RS21775 PF01432 Peptidase family M3 MRP56_RS21780 PF00490 Delta-aminolevulinic acid dehydratase MRP56_RS21785 PF01026 TatD related DNase MRP56_RS21790 PF00902 Sec-independent protein translocase protein (TatC) MRP56_RS21795 PF02416 mttA/Hcf106 family MRP56_RS21800 PF02416 mttA/Hcf106 family MRP56_RS21805 PF03109 ABC1 family MRP56_RS21810 PF02036 SCP-2 sterol transfer family MRP56_RS21815 PF01209 ubiE/COQ5 methyltransferase family MRP56_RS21820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MRP56_RS21825 PF07969 Amidohydrolase family MRP56_RS21870 PF03544 Gram-negative bacterial TonB protein C-terminal MRP56_RS21875 PF02472 Biopolymer transport protein ExbD/TolR MRP56_RS21880 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS21885 PF01618 MotA/TolQ/ExbB proton channel family MRP56_RS21895 PF03472 Autoinducer binding domain MRP56_RS21895 PF00196 Bacterial regulatory proteins, luxR family MRP56_RS21900 PF01380 SIS domain MRP56_RS21905 PF00455 DeoR C terminal sensor domain MRP56_RS21905 PF08220 DeoR-like helix-turn-helix domain MRP56_RS21910 PF00072 Response regulator receiver domain MRP56_RS21910 PF00486 Transcriptional regulatory protein, C terminal MRP56_RS21915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MRP56_RS21915 PF00672 HAMP domain MRP56_RS21915 PF00512 His Kinase A (phospho-acceptor) domain MRP56_RS21920 PF00905 Penicillin binding protein transpeptidase domain MRP56_RS21925 PF06123 Inner membrane protein CreD MRP56_RS21930 PF00132 Bacterial transferase hexapeptide (six repeats) MRP56_RS21930 PF14602 Hexapeptide repeat of succinyl-transferase MRP56_RS21930 PF12804 MobA-like NTP transferase domain MRP56_RS21935 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MRP56_RS21935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MRP56_RS21940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MRP56_RS21940 PF02874 ATP synthase alpha/beta family, beta-barrel domain MRP56_RS21945 PF00231 ATP synthase MRP56_RS21950 PF02874 ATP synthase alpha/beta family, beta-barrel domain MRP56_RS21950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MRP56_RS21950 PF00306 ATP synthase alpha/beta chain, C terminal domain MRP56_RS21955 PF00213 ATP synthase delta (OSCP) subunit MRP56_RS21960 PF00430 ATP synthase B/B' CF(0) MRP56_RS21965 PF00137 ATP synthase subunit C MRP56_RS21970 PF00119 ATP synthase A chain MRP56_RS21980 PF17762 HTH domain found in ParB protein MRP56_RS21980 PF02195 ParB-like nuclease domain MRP56_RS21985 PF13614 AAA domain MRP56_RS21990 PF02527 rRNA small subunit methyltransferase G MRP56_RS21995 PF01134 Glucose inhibited division protein A MRP56_RS21995 PF13932 GidA associated domain MRP56_RS22000 PF00258 Flavodoxin MRP56_RS22005 PF00593 TonB dependent receptor MRP56_RS22005 PF07715 TonB-dependent Receptor Plug Domain MRP56_RS22010 PF00005 ABC transporter MRP56_RS22015 PF00005 ABC transporter MRP56_RS22025 PF01032 FecCD transport family MRP56_RS22030 PF01926 50S ribosome-binding GTPase MRP56_RS22030 PF12631 MnmE helical domain MRP56_RS22030 PF10396 GTP-binding protein TrmE N-terminus MRP56_RS22035 PF02096 60Kd inner membrane protein MRP56_RS22035 PF14849 YidC periplasmic domain MRP56_RS22040 PF01809 Putative membrane protein insertion efficiency factor MRP56_RS22045 PF00825 Ribonuclease P MRP56_RS22050 PF00468 Ribosomal protein L34 MRP56_RS22055 PF00005 ABC transporter MRP56_RS22060 PF00528 Binding-protein-dependent transport system inner membrane component MRP56_RS22065 PF00497 Bacterial extracellular solute-binding proteins, family 3