RY45_RS00005 IPR001957 Chromosomal replication control, initiator DnaA RY45_RS00005 IPR003593 AAA+ ATPase domain RY45_RS00005 IPR010921 Trp repressor/replication initiator RY45_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal RY45_RS00005 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RY45_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RY45_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like RY45_RS00005 IPR024633 DnaA N-terminal domain RY45_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00010 IPR001001 DNA polymerase III, beta chain RY45_RS00010 IPR022634 DNA polymerase III, beta chain, N-terminal RY45_RS00010 IPR022635 DNA polymerase III, beta chain, C-terminal RY45_RS00010 IPR022637 DNA polymerase III, beta chain, central RY45_RS00015 IPR001238 DNA-binding, RecF RY45_RS00015 IPR003395 RecF/RecN/SMC, N-terminal RY45_RS00015 IPR018078 DNA-binding, RecF, conserved site RY45_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00020 IPR000565 DNA topoisomerase, type IIA, subunit B RY45_RS00020 IPR001241 DNA topoisomerase, type IIA RY45_RS00020 IPR002288 DNA gyrase B subunit, C-terminal RY45_RS00020 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00020 IPR006171 Toprim domain RY45_RS00020 IPR011557 DNA gyrase, subunit B RY45_RS00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RY45_RS00020 IPR013759 DNA topoisomerase, type IIA, central domain RY45_RS00020 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS00020 IPR018522 DNA topoisomerase, type IIA, conserved site RY45_RS00020 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS00025 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS00025 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase RY45_RS00025 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS00030 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00030 IPR013196 Helix-turn-helix, type 11 RY45_RS00030 IPR026881 WYL domain RY45_RS00035 IPR002068 Alpha crystallin/Hsp20 domain RY45_RS00035 IPR008978 HSP20-like chaperone RY45_RS00035 IPR031107 RY45_RS00035 RY45_RS00040 IPR002068 Alpha crystallin/Hsp20 domain RY45_RS00040 IPR008978 HSP20-like chaperone RY45_RS00040 IPR031107 RY45_RS00040 RY45_RS00045 IPR004839 Aminotransferase, class I/classII RY45_RS00045 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS00045 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS00045 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS00050 IPR010916 TonB box, conserved site RY45_RS00055 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS00055 IPR009057 Homeodomain-like RY45_RS00055 IPR011051 RmlC-like cupin domain RY45_RS00055 IPR014710 RmlC-like jelly roll fold RY45_RS00055 IPR018060 DNA binding HTH domain, AraC-type RY45_RS00060 IPR011701 Major facilitator superfamily RY45_RS00060 IPR020846 Major facilitator superfamily domain RY45_RS00065 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00065 IPR001867 Signal transduction response regulator, C-terminal RY45_RS00065 IPR011006 CheY-like superfamily RY45_RS00065 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00065 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS00070 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00070 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS00070 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RY45_RS00070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS00070 IPR025201 Sensor protein KdpD, transmembrane domain RY45_RS00070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00075 IPR003820 Potassium-transporting ATPase C chain RY45_RS00080 IPR001757 Cation-transporting P-type ATPase RY45_RS00080 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA RY45_RS00080 IPR008250 P-type ATPase, A domain RY45_RS00080 IPR018303 P-type ATPase, phosphorylation site RY45_RS00080 IPR023214 HAD-like domain RY45_RS00080 IPR023299 P-type ATPase, cytoplasmic domain N RY45_RS00085 IPR004623 Potassium-transporting ATPase A chain RY45_RS00090 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY45_RS00090 IPR006322 Glutathione reductase, eukaryote/bacterial RY45_RS00090 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RY45_RS00090 IPR016156 FAD/NAD-linked reductase, dimerisation domain RY45_RS00090 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS00095 IPR000014 PAS domain RY45_RS00095 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00095 IPR003660 HAMP linker domain RY45_RS00095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS00095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS00095 IPR033414 RY45_RS00095 RY45_RS00100 IPR001036 Acriflavin resistance protein RY45_RS00100 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS00105 IPR006143 RND efflux pump, membrane fusion protein RY45_RS00105 IPR032317 RY45_RS00105 RY45_RS00110 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS00110 IPR009057 Homeodomain-like RY45_RS00110 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS00110 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS00110 IPR032551 RY45_RS00110 RY45_RS00135 IPR000772 Ricin B lectin domain RY45_RS00140 IPR001697 Pyruvate kinase RY45_RS00140 IPR011037 Pyruvate kinase-like, insert domain RY45_RS00140 IPR015793 Pyruvate kinase, barrel RY45_RS00140 IPR015806 Pyruvate kinase, beta-barrel insert domain RY45_RS00140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS00145 IPR000849 Sugar phosphate transporter RY45_RS00145 IPR011701 Major facilitator superfamily RY45_RS00145 IPR020846 Major facilitator superfamily domain RY45_RS00155 IPR000014 PAS domain RY45_RS00155 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00155 IPR003660 HAMP linker domain RY45_RS00155 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS00155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS00155 IPR017116 Signal transduction histidine kinase, PgtB RY45_RS00160 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00160 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS00160 IPR002197 DNA binding HTH domain, Fis-type RY45_RS00160 IPR009057 Homeodomain-like RY45_RS00160 IPR011006 CheY-like superfamily RY45_RS00160 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00170 IPR000150 Cof protein RY45_RS00170 IPR006379 HAD-superfamily hydrolase, subfamily IIB RY45_RS00170 IPR023214 HAD-like domain RY45_RS00175 IPR022742 Putative lysophospholipase RY45_RS00175 IPR029058 Alpha/Beta hydrolase fold RY45_RS00180 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS00180 IPR011004 Trimeric LpxA-like RY45_RS00180 IPR018357 Hexapeptide transferase, conserved site RY45_RS00185 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS00185 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal RY45_RS00185 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS00185 IPR029028 Alpha/beta knot methyltransferases RY45_RS00190 IPR002912 ACT domain RY45_RS00190 IPR003607 HD/PDEase domain RY45_RS00190 IPR004095 TGS RY45_RS00190 IPR004811 RelA/SpoT family RY45_RS00190 IPR007685 RelA/SpoT RY45_RS00190 IPR012675 Beta-grasp domain RY45_RS00190 IPR012676 TGS-like RY45_RS00195 IPR003716 DNA-directed RNA polymerase, omega subunit RY45_RS00195 IPR006110 RNA polymerase, subunit omega/K/RPB6 RY45_RS00195 IPR012293 RNA polymerase subunit, RPB6/omega RY45_RS00200 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RY45_RS00200 IPR017665 Guanylate kinase RY45_RS00200 IPR020590 Guanylate kinase, conserved site RY45_RS00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00205 IPR002201 Glycosyl transferase, family 9 RY45_RS00210 IPR010440 Lipopolysaccharide kinase RY45_RS00210 IPR011009 Protein kinase-like domain RY45_RS00210 IPR022826 3-deoxy-D-manno-octulosonic acid kinase RY45_RS00215 IPR000014 PAS domain RY45_RS00215 IPR000160 GGDEF domain RY45_RS00215 IPR013655 PAS fold-3 RY45_RS00215 IPR029787 Nucleotide cyclase RY45_RS00220 IPR000620 Drug/metabolite transporter RY45_RS00220 IPR004779 Carboxylate/Amino Acid/Amine Transporter RY45_RS00230 IPR000620 Drug/metabolite transporter RY45_RS00235 IPR000847 Transcription regulator HTH, LysR RY45_RS00235 IPR005119 LysR, substrate-binding RY45_RS00235 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00240 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS00240 IPR002305 Aminoacyl-tRNA synthetase, class Ic RY45_RS00240 IPR002306 Tryptophan-tRNA ligase RY45_RS00240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS00245 IPR006015 Universal stress protein A RY45_RS00245 IPR006016 UspA RY45_RS00245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS00250 IPR010758 Trans-2-enoyl-CoA reductase RY45_RS00250 IPR016040 NAD(P)-binding domain RY45_RS00250 IPR024906 Enoyl reductase FAD binding domain RY45_RS00250 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative RY45_RS00255 IPR000160 GGDEF domain RY45_RS00255 IPR011990 Tetratricopeptide-like helical domain RY45_RS00255 IPR029787 Nucleotide cyclase RY45_RS00260 IPR001519 Ferritin RY45_RS00260 IPR008331 Ferritin/DPS protein domain RY45_RS00260 IPR009078 Ferritin-like superfamily RY45_RS00260 IPR012347 Ferritin-related RY45_RS00265 IPR023166 HI0933 insert-like domain RY45_RS00265 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS00270 IPR011701 Major facilitator superfamily RY45_RS00270 IPR020846 Major facilitator superfamily domain RY45_RS00275 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS00280 IPR008962 PapD-like RY45_RS00280 IPR016147 PapD, N-terminal, bacterial RY45_RS00290 IPR031917 RY45_RS00290 RY45_RS00290 IPR032636 RY45_RS00290 RY45_RS00295 IPR008962 PapD-like RY45_RS00300 IPR016514 Fimbrial protein MatB RY45_RS00305 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS00305 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00305 IPR011006 CheY-like superfamily RY45_RS00305 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00305 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS00310 IPR000014 PAS domain RY45_RS00310 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS00310 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00310 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00310 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS00310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS00310 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS00310 IPR011006 CheY-like superfamily RY45_RS00320 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00320 IPR010559 Signal transduction histidine kinase, internal region RY45_RS00320 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RY45_RS00320 IPR029016 GAF domain-like RY45_RS00325 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00325 IPR007492 LytTR DNA-binding domain RY45_RS00325 IPR011006 CheY-like superfamily RY45_RS00330 IPR011701 Major facilitator superfamily RY45_RS00330 IPR020846 Major facilitator superfamily domain RY45_RS00335 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RY45_RS00335 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RY45_RS00335 IPR011054 Rudiment single hybrid motif RY45_RS00335 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS00335 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS00335 IPR016185 Pre-ATP-grasp domain RY45_RS00340 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RY45_RS00340 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RY45_RS00345 IPR011322 Nitrogen regulatory PII-like, alpha/beta RY45_RS00350 IPR010293 Protein of unknown function DUF897 RY45_RS00360 IPR009734 Myoviridae, GpU RY45_RS00360 IPR016912 Bacteriophage P2, GpU RY45_RS00365 IPR010090 Phage tail tape measure protein RY45_RS00375 IPR019289 Bacteriophage tail protein Gp41, putative RY45_RS00380 IPR006498 Bacteriophage P2, FII, major tail tube protein RY45_RS00385 IPR007067 Tail sheath protein RY45_RS00390 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RY45_RS00395 IPR022225 Phage tail fibre protein RY45_RS00400 IPR006521 Tail protein I RY45_RS00405 IPR006949 Baseplate assembly protein J-like, predicted RY45_RS00405 IPR014507 Baseplate assembly protein J, predicted RY45_RS00410 IPR007048 GpW/Gp25/anti-adapter protein IraD RY45_RS00415 IPR006531 Gp5 N-terminal RY45_RS00415 IPR013046 Bacteriophage Mu/P2, baseplate assembly RY45_RS00420 IPR006522 Phage virion morphogensis protein RY45_RS00425 IPR009678 Bacteriophage tail completion protein R RY45_RS00430 IPR020000 Bacteriophage P2, LysB RY45_RS00435 IPR002477 Peptidoglycan binding-like RY45_RS00435 IPR024408 Domain of unknown function DUF3380 RY45_RS00440 IPR008473 Bacteriophage D3, Orf90 RY45_RS00450 IPR032637 RY45_RS00450 RY45_RS00455 IPR000962 Zinc finger, DksA/TraR C4-type RY45_RS00460 IPR008861 Bacteriophage P2, GpX RY45_RS00465 IPR009225 Bacteriophage head completion protein GpL RY45_RS00470 IPR010270 Bacteriophage P2, GpM RY45_RS00470 IPR011990 Tetratricopeptide-like helical domain RY45_RS00475 IPR006441 Bacteriophage P2, GpN, major capsid RY45_RS00480 IPR009228 Capsid scaffolding protein GpO RY45_RS00485 IPR004921 Terminase, large subunit RY45_RS00485 IPR010332 ATPase terminase subunit, putative RY45_RS00485 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00490 IPR006430 Phage portal protein, PBSX family RY45_RS00490 IPR006944 Bacteriophage/Gene transfer agent portal protein RY45_RS00490 IPR030935 RY45_RS00490 RY45_RS00500 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS00500 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS00505 IPR009052 DNA polymerase III-theta, bacterial RY45_RS00505 IPR011326 Homologue of theta DNA polymerase III RY45_RS00505 IPR021700 Protein of unknown function DUF3283 RY45_RS00520 IPR015947 PUA-like domain RY45_RS00535 IPR008766 Replication gene A protein RY45_RS00580 IPR007791 Heat shock protein DnaJ-like protein DjlA RY45_RS00580 IPR029024 TerB-like RY45_RS00595 IPR007684 Zinc finger, Ogr/Delta-type RY45_RS00600 IPR009679 Bacteriophage 186, CII RY45_RS00620 IPR002104 Integrase, catalytic RY45_RS00620 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS00620 IPR013762 Integrase-like, catalytic core RY45_RS00625 IPR000847 Transcription regulator HTH, LysR RY45_RS00625 IPR005119 LysR, substrate-binding RY45_RS00625 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00630 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS00630 IPR010101 TonB-dependent vitamin B12 transporter BtuB RY45_RS00630 IPR012910 TonB-dependent receptor, plug RY45_RS00645 IPR000504 RNA recognition motif domain RY45_RS00645 IPR012677 Nucleotide-binding, alpha-beta plait RY45_RS00680 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS00680 IPR013108 Amidohydrolase 3 RY45_RS00680 IPR032466 RY45_RS00680 RY45_RS00685 IPR003691 Putative fluoride ion transporter CrcB RY45_RS00690 IPR004033 UbiE/COQ5 methyltransferase RY45_RS00690 IPR023576 UbiE/COQ5 methyltransferase, conserved site RY45_RS00690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS00695 IPR003033 SCP2 sterol-binding domain RY45_RS00700 IPR004147 UbiB domain RY45_RS00700 IPR010232 Probable protein kinase UbiB RY45_RS00700 IPR011009 Protein kinase-like domain RY45_RS00705 IPR003369 Sec-independent protein translocase protein TatA/B/E RY45_RS00705 IPR006312 Sec-independent protein translocase protein TatA/E RY45_RS00710 IPR003369 Sec-independent protein translocase protein TatA/B/E RY45_RS00710 IPR003998 Twin-arginine translocation protein TatB-like RY45_RS00710 IPR018448 Twin-arginine translocation protein TatB RY45_RS00715 IPR002033 Sec-independent periplasmic protein translocase TatC RY45_RS00715 IPR019820 Sec-independent periplasmic protein translocase, conserved site RY45_RS00720 IPR001130 TatD family RY45_RS00720 IPR032466 RY45_RS00720 RY45_RS00725 IPR001731 Porphobilinogen synthase RY45_RS00725 IPR013785 Aldolase-type TIM barrel RY45_RS00725 IPR030656 RY45_RS00725 RY45_RS00730 IPR001567 Peptidase M3A/M3B RY45_RS00730 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RY45_RS00730 IPR024079 Metallopeptidase, catalytic domain RY45_RS00730 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RY45_RS00735 IPR000014 PAS domain RY45_RS00735 IPR000160 GGDEF domain RY45_RS00735 IPR001610 PAC motif RY45_RS00735 IPR001633 EAL domain RY45_RS00735 IPR013767 PAS fold RY45_RS00735 IPR029016 GAF domain-like RY45_RS00735 IPR029787 Nucleotide cyclase RY45_RS00740 IPR007536 Ribosomal RNA small subunit methyltransferase J RY45_RS00740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS00745 IPR009778 Modulator of Rho-dependent transcription termination RY45_RS00745 IPR023534 Rof/RNase P-like RY45_RS00750 IPR025491 Domain of unknown function DUF4382 RY45_RS00755 IPR003695 Ppx/GppA phosphatase RY45_RS00755 IPR006674 HD domain RY45_RS00755 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase RY45_RS00755 IPR030673 RY45_RS00755 RY45_RS00760 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS00760 IPR001650 Helicase, C-terminal RY45_RS00760 IPR011545 DEAD/DEAH box helicase domain RY45_RS00760 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS00760 IPR023554 RNA helicase, ATP-dependent, RhlB-type RY45_RS00760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00765 IPR005746 Thioredoxin RY45_RS00765 IPR012336 Thioredoxin-like fold RY45_RS00765 IPR013766 Thioredoxin domain RY45_RS00765 IPR017937 Thioredoxin, conserved site RY45_RS00770 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS00770 IPR003593 AAA+ ATPase domain RY45_RS00770 IPR004665 Transcription termination factor Rho RY45_RS00770 IPR011112 Rho termination factor, N-terminal RY45_RS00770 IPR011113 Rho termination factor, RNA-binding RY45_RS00770 IPR011129 Cold shock protein RY45_RS00770 IPR012340 Nucleic acid-binding, OB-fold RY45_RS00770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00780 IPR002830 UbiD decarboxylyase family RY45_RS00780 IPR012349 FMN-binding split barrel RY45_RS00780 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RY45_RS00785 IPR001221 Phenol hydroxylase reductase RY45_RS00785 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS00785 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS00790 IPR007475 Membrane fusogenic activity RY45_RS00795 IPR020009 Extracellular lipase, Pla-1/cef family RY45_RS00795 IPR025920 Bacterial virulence factor lipase, N-terminal domain RY45_RS00795 IPR029058 Alpha/Beta hydrolase fold RY45_RS00800 IPR002610 Peptidase S54, rhomboid RY45_RS00800 IPR022732 Peptidase S54, GlpG peptidase, N-terminal RY45_RS00800 IPR022764 Peptidase S54, rhomboid domain RY45_RS00800 IPR023662 Rhomboid protease GlpG RY45_RS00805 IPR001763 Rhodanese-like domain RY45_RS00805 IPR023695 Thiosulfate sulfurtransferase, bacterial RY45_RS00810 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS00815 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS00815 IPR009057 Homeodomain-like RY45_RS00815 IPR018060 DNA binding HTH domain, AraC-type RY45_RS00815 IPR018062 HTH domain AraC-type, conserved site RY45_RS00815 IPR020449 Transcription regulator HTH, AraC- type RY45_RS00820 IPR003439 ABC transporter-like RY45_RS00820 IPR003593 AAA+ ATPase domain RY45_RS00820 IPR017871 ABC transporter, conserved site RY45_RS00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00820 IPR029224 Pilus-assembly complex, chaperone PapJ RY45_RS00820 IPR030660 RY45_RS00820 RY45_RS00825 IPR003439 ABC transporter-like RY45_RS00825 IPR003593 AAA+ ATPase domain RY45_RS00825 IPR017871 ABC transporter, conserved site RY45_RS00825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00825 IPR032823 RY45_RS00825 RY45_RS00830 IPR001851 ABC transporter, permease RY45_RS00830 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RY45_RS00835 IPR001851 ABC transporter, permease RY45_RS00840 IPR000709 Leu/Ile/Val-binding protein RY45_RS00840 IPR028081 Leucine-binding protein domain RY45_RS00840 IPR028082 Periplasmic binding protein-like I RY45_RS00845 IPR000843 Transcription regulator HTH, LacI RY45_RS00845 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS00845 IPR028082 Periplasmic binding protein-like I RY45_RS00850 IPR001088 Glycoside hydrolase, family 4 RY45_RS00850 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RY45_RS00850 IPR016040 NAD(P)-binding domain RY45_RS00850 IPR019802 Glycoside hydrolase, family 4, conserved site RY45_RS00850 IPR022616 Glycosyl hydrolase, family 4, C-terminal RY45_RS00855 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS00855 IPR003352 Phosphotransferase system, EIIC RY45_RS00855 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS00860 IPR000524 Transcription regulator HTH, GntR RY45_RS00860 IPR011663 UbiC transcription regulator-associated RY45_RS00860 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00860 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RY45_RS00865 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS00865 IPR003018 GAF domain RY45_RS00865 IPR003593 AAA+ ATPase domain RY45_RS00865 IPR009057 Homeodomain-like RY45_RS00865 IPR023944 Anaerobic nitric oxide reductase transcription regulator RY45_RS00865 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS00865 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00865 IPR029016 GAF domain-like RY45_RS00870 IPR001279 Beta-lactamase-like RY45_RS00870 IPR004039 Rubredoxin-type fold RY45_RS00870 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS00870 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin RY45_RS00870 IPR024935 Rubredoxin domain RY45_RS00870 IPR029039 Flavoprotein-like RY45_RS00875 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS00875 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase RY45_RS00880 IPR014510 Tellurite resistance predicted, YeaR RY45_RS00880 IPR014710 RmlC-like jelly roll fold RY45_RS00880 IPR015392 Domain of unknown function DUF1971 RY45_RS00885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS00885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS00890 IPR002091 Aromatic amino acid permease RY45_RS00890 IPR013059 Tryptophan/tyrosine transporter RY45_RS00890 IPR018227 Tryptophan/tyrosine permease RY45_RS00900 IPR005416 Type III secretion chaperone SycE RY45_RS00900 IPR010261 Tir chaperone protein (CesT) family RY45_RS00905 IPR003537 Yersinia virulence determinant YopE RY45_RS00905 IPR014773 Virulence factor YopE uncharacterised domain RY45_RS00910 IPR019545 DM13 domain RY45_RS00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS00925 IPR008909 DALR anticodon binding RY45_RS00925 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS00925 IPR015944 Glycine-tRNA ligase, beta subunit RY45_RS00930 IPR002310 Glycine-tRNA ligase, alpha subunit RY45_RS00935 IPR004597 DNA-3-methyladenine glycosylase I RY45_RS00935 IPR005019 Methyladenine glycosylase RY45_RS00935 IPR011257 DNA glycosylase RY45_RS00940 IPR000868 Isochorismatase-like RY45_RS00945 IPR006664 Outer membrane protein, bacterial RY45_RS00945 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS00945 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS00950 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RY45_RS00955 IPR006175 YjgF/Yer057p/UK114 family RY45_RS00955 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RY45_RS00960 IPR001455 TusA-like domain RY45_RS00960 IPR022931 Sulphurtransferase TusA RY45_RS00970 IPR006059 Bacterial extracellular solute-binding, family 1 RY45_RS00975 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS00975 IPR003660 HAMP linker domain RY45_RS00975 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS00975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS00980 IPR001789 Signal transduction response regulator, receiver domain RY45_RS00980 IPR001867 Signal transduction response regulator, C-terminal RY45_RS00980 IPR011006 CheY-like superfamily RY45_RS00980 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS00980 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS00985 IPR002155 Thiolase RY45_RS00985 IPR012805 Acetyl-CoA C-acyltransferase FadA RY45_RS00985 IPR016039 Thiolase-like RY45_RS00985 IPR020610 Thiolase, active site RY45_RS00985 IPR020613 Thiolase, conserved site RY45_RS00985 IPR020615 Thiolase, acyl-enzyme intermediate active site RY45_RS00985 IPR020616 Thiolase, N-terminal RY45_RS00985 IPR020617 Thiolase, C-terminal RY45_RS00990 IPR001753 Crotonase superfamily RY45_RS00990 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RY45_RS00990 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RY45_RS00990 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RY45_RS00990 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS00990 IPR012799 Fatty oxidation complex, alpha subunit FadB RY45_RS00990 IPR013328 Dehydrogenase, multihelical RY45_RS00990 IPR016040 NAD(P)-binding domain RY45_RS00990 IPR029045 ClpP/crotonase-like domain RY45_RS00995 IPR000873 AMP-dependent synthetase/ligase RY45_RS00995 IPR005914 Acetoacetyl-CoA synthase RY45_RS00995 IPR020845 AMP-binding, conserved site RY45_RS00995 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS00995 IPR032387 RY45_RS00995 RY45_RS01000 IPR000994 Peptidase M24, structural domain RY45_RS01000 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RY45_RS01000 IPR022846 Xaa-Pro dipeptidase RY45_RS01005 IPR000640 Translation elongation factor EFG, V domain RY45_RS01005 IPR001498 Impact, N-terminal RY45_RS01005 IPR009022 Elongation factor G, III-V domain RY45_RS01005 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RY45_RS01005 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS01005 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RY45_RS01005 IPR023582 Impact family RY45_RS01010 IPR003445 Cation transporter RY45_RS01010 IPR004772 Potassium uptake protein TrkH family RY45_RS01015 IPR026816 Flavodoxin domain RY45_RS01015 IPR029039 Flavoprotein-like RY45_RS01040 IPR000182 GNAT domain RY45_RS01040 IPR003781 CoA-binding RY45_RS01040 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS01040 IPR016040 NAD(P)-binding domain RY45_RS01040 IPR016102 Succinyl-CoA synthetase-like RY45_RS01040 IPR016181 Acyl-CoA N-acyltransferase RY45_RS01040 IPR032875 RY45_RS01040 RY45_RS01050 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS01055 IPR000847 Transcription regulator HTH, LysR RY45_RS01055 IPR005119 LysR, substrate-binding RY45_RS01055 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01060 IPR000506 Acetohydroxy acid isomeroreductase C-terminal RY45_RS01060 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS01060 IPR013023 Acetohydroxy acid isomeroreductase RY45_RS01060 IPR013116 Acetohydroxy acid isomeroreductase, catalytic RY45_RS01060 IPR013328 Dehydrogenase, multihelical RY45_RS01060 IPR016040 NAD(P)-binding domain RY45_RS01065 IPR001672 Phosphoglucose isomerase (PGI) RY45_RS01065 IPR018189 Phosphoglucose isomerase, conserved site RY45_RS01065 IPR023096 Phosphoglucose isomerase, C-terminal RY45_RS01080 IPR006685 Mechanosensitive ion channel MscS RY45_RS01080 IPR008910 Conserved TM helix RY45_RS01080 IPR010920 Like-Sm (LSM) domain RY45_RS01080 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RY45_RS01080 IPR011066 Mechanosensitive ion channel MscS, C-terminal RY45_RS01085 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS01085 IPR009057 Homeodomain-like RY45_RS01085 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS01085 IPR023769 Nucleoid occlusion factor SlmA RY45_RS01090 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RY45_RS01090 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RY45_RS01090 IPR029054 dUTPase-like RY45_RS01095 IPR003382 Flavoprotein RY45_RS01095 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RY45_RS01095 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RY45_RS01100 IPR001405 RadC protein RY45_RS01100 IPR010994 RuvA domain 2-like RY45_RS01100 IPR020891 Uncharacterised protein family UPF0758, conserved site RY45_RS01100 IPR025657 RadC-like JAB domain RY45_RS01105 IPR001705 Ribosomal protein L33 RY45_RS01105 IPR011332 Zinc-binding ribosomal protein RY45_RS01105 IPR018264 Ribosomal protein L33, conserved site RY45_RS01115 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RY45_RS01115 IPR010979 Ribosomal protein S13-like, H2TH RY45_RS01115 IPR012319 DNA glycosylase/AP lyase, catalytic domain RY45_RS01115 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RY45_RS01115 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RY45_RS01115 IPR020629 Formamidopyrimidine-DNA glycosylase RY45_RS01120 IPR007488 Protein of unknown function DUF535 RY45_RS01125 IPR001980 Coenzyme A biosynthesis protein RY45_RS01125 IPR004821 Cytidyltransferase-like domain RY45_RS01125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS01130 IPR002201 Glycosyl transferase, family 9 RY45_RS01135 IPR001173 Glycosyltransferase 2-like RY45_RS01135 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS01140 IPR002201 Glycosyl transferase, family 9 RY45_RS01140 IPR011910 Lipopolysaccharide heptosyltransferase II RY45_RS01145 IPR001296 Glycosyl transferase, family 1 RY45_RS01145 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RY45_RS01150 IPR004703 Phosphotransferase system, sugar-specific permease component RY45_RS01155 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS01160 IPR002178 PTS EIIA type-2 domain RY45_RS01160 IPR016152 Phosphotransferase/anion transporter RY45_RS01165 IPR000843 Transcription regulator HTH, LacI RY45_RS01165 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS01165 IPR028082 Periplasmic binding protein-like I RY45_RS01170 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS01170 IPR011032 GroES (chaperonin 10)-like RY45_RS01170 IPR013149 Alcohol dehydrogenase, C-terminal RY45_RS01170 IPR013154 Alcohol dehydrogenase GroES-like RY45_RS01170 IPR014188 Acrylyl-CoA reductase AcuI RY45_RS01170 IPR016040 NAD(P)-binding domain RY45_RS01170 IPR020843 Polyketide synthase, enoylreductase RY45_RS01175 IPR021242 Protein of unknown function DUF2799 RY45_RS01180 IPR005503 Flagellar basal body-associated protein FliL RY45_RS01185 IPR007440 Chorismate--pyruvate lyase RY45_RS01185 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RY45_RS01190 IPR000537 UbiA prenyltransferase family RY45_RS01190 IPR006370 4-hydroxybenzoate polyprenyl transferase RY45_RS01190 IPR030470 RY45_RS01190 RY45_RS01190 IPR031103 RY45_RS01190 RY45_RS01195 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS01195 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase RY45_RS01195 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB RY45_RS01200 IPR006197 Peptidase S24, LexA-like RY45_RS01200 IPR006199 LexA repressor, DNA-binding domain RY45_RS01200 IPR006200 LexA repressor RY45_RS01200 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01200 IPR015927 Peptidase S24/S26A/S26B/S26C RY45_RS01200 IPR019759 Peptidase S24/S26A/S26B RY45_RS01200 IPR028360 Peptidase S24/S26, beta-ribbon domain RY45_RS01210 IPR003782 Copper chaperone SCO1/SenC RY45_RS01210 IPR012336 Thioredoxin-like fold RY45_RS01215 IPR002528 Multi antimicrobial extrusion protein RY45_RS01220 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS01220 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RY45_RS01220 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS01220 IPR029028 Alpha/beta knot methyltransferases RY45_RS01225 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS01225 IPR003660 HAMP linker domain RY45_RS01225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS01225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS01230 IPR001789 Signal transduction response regulator, receiver domain RY45_RS01230 IPR001867 Signal transduction response regulator, C-terminal RY45_RS01230 IPR011006 CheY-like superfamily RY45_RS01230 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01230 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS01235 IPR002524 Cation efflux protein RY45_RS01235 IPR027469 Cation efflux protein transmembrane domain RY45_RS01235 IPR027470 Cation efflux protein cytoplasmic domain RY45_RS01240 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS01240 IPR005881 Serine O-acetyltransferase RY45_RS01240 IPR010493 Serine acetyltransferase, N-terminal RY45_RS01240 IPR011004 Trimeric LpxA-like RY45_RS01240 IPR018357 Hexapeptide transferase, conserved site RY45_RS01250 IPR009252 Cell division protein ZapB RY45_RS01255 IPR002818 ThiJ/PfpI RY45_RS01255 IPR026041 Enhancing lycopene biosynthesis protein 2 RY45_RS01255 IPR029062 Class I glutamine amidotransferase-like RY45_RS01260 IPR001098 DNA-directed DNA polymerase, family A, palm domain RY45_RS01260 IPR002298 DNA polymerase A RY45_RS01260 IPR002421 5'-3' exonuclease, N-terminal RY45_RS01260 IPR002562 3'-5' exonuclease domain RY45_RS01260 IPR008918 Helix-hairpin-helix motif, class 2 RY45_RS01260 IPR012337 Ribonuclease H-like domain RY45_RS01260 IPR018320 DNA polymerase 1 RY45_RS01260 IPR019760 DNA-directed DNA polymerase, family A, conserved site RY45_RS01260 IPR020045 5'-3' exonuclease, C-terminal domain RY45_RS01260 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RY45_RS01260 IPR029060 PIN domain-like RY45_RS01265 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS01265 IPR011004 Trimeric LpxA-like RY45_RS01305 IPR000843 Transcription regulator HTH, LacI RY45_RS01305 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS01305 IPR028082 Periplasmic binding protein-like I RY45_RS01310 IPR004199 Beta galactosidase small chain/ domain 5 RY45_RS01310 IPR006101 Glycoside hydrolase, family 2 RY45_RS01310 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RY45_RS01310 IPR006103 Glycoside hydrolase, family 2, TIM barrel RY45_RS01310 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RY45_RS01310 IPR008979 Galactose-binding domain-like RY45_RS01310 IPR011013 Galactose mutarotase-like domain RY45_RS01310 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS01310 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain RY45_RS01310 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup RY45_RS01310 IPR017853 Glycoside hydrolase, superfamily RY45_RS01310 IPR023230 Glycoside hydrolase, family 2, conserved site RY45_RS01310 IPR023232 Glycoside hydrolase, family 2, active site RY45_RS01310 IPR032312 RY45_RS01310 RY45_RS01315 IPR004375 Conserved hypothetical protein CHP00022 RY45_RS01320 IPR002293 Amino acid/polyamine transporter I RY45_RS01325 IPR002547 tRNA-binding domain RY45_RS01325 IPR012340 Nucleic acid-binding, OB-fold RY45_RS01330 IPR002293 Amino acid/polyamine transporter I RY45_RS01335 IPR016833 Putative sodium bile acid cotransporter RY45_RS01340 IPR005532 Formylglycine-generating sulphatase enzyme domain RY45_RS01340 IPR013216 Methyltransferase type 11 RY45_RS01340 IPR016187 C-type lectin fold RY45_RS01340 IPR024775 DinB-like domain RY45_RS01340 IPR027577 5-histidylcysteine sulfoxide synthase RY45_RS01340 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain RY45_RS01340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS01345 IPR021255 Protein of unknown function DUF2807 RY45_RS01350 IPR000801 Putative esterase RY45_RS01350 IPR014186 S-formylglutathione hydrolase RY45_RS01350 IPR029058 Alpha/Beta hydrolase fold RY45_RS01355 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS01355 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RY45_RS01355 IPR011032 GroES (chaperonin 10)-like RY45_RS01355 IPR013149 Alcohol dehydrogenase, C-terminal RY45_RS01355 IPR013154 Alcohol dehydrogenase GroES-like RY45_RS01355 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase RY45_RS01355 IPR016040 NAD(P)-binding domain RY45_RS01355 IPR020843 Polyketide synthase, enoylreductase RY45_RS01360 IPR000847 Transcription regulator HTH, LysR RY45_RS01360 IPR005119 LysR, substrate-binding RY45_RS01360 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01365 IPR001851 ABC transporter, permease RY45_RS01370 IPR001851 ABC transporter, permease RY45_RS01375 IPR003439 ABC transporter-like RY45_RS01375 IPR003593 AAA+ ATPase domain RY45_RS01375 IPR017871 ABC transporter, conserved site RY45_RS01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01380 IPR003760 Basic membrane lipoprotein RY45_RS01380 IPR028082 Periplasmic binding protein-like I RY45_RS01385 IPR000212 DNA helicase, UvrD/REP type RY45_RS01385 IPR013986 DExx box DNA helicase domain RY45_RS01385 IPR014016 UvrD-like Helicase, ATP-binding domain RY45_RS01385 IPR014017 DNA helicase, UvrD-like, C-terminal RY45_RS01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01405 IPR000847 Transcription regulator HTH, LysR RY45_RS01405 IPR005119 LysR, substrate-binding RY45_RS01405 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01415 IPR001452 SH3 domain RY45_RS01415 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 RY45_RS01425 IPR017704 Putative selenium-binding protein YdfZ RY45_RS01430 IPR018531 Domain of unknown function DUF1993 RY45_RS01430 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RY45_RS01435 IPR013538 Activator of Hsp90 ATPase homologue 1-like RY45_RS01435 IPR023393 START-like domain RY45_RS01440 IPR011051 RmlC-like cupin domain RY45_RS01440 IPR013096 Cupin 2, conserved barrel RY45_RS01440 IPR014710 RmlC-like jelly roll fold RY45_RS01445 IPR021747 Protein of unknown function DUF3313 RY45_RS01450 IPR010404 Chromophore lyase CpcT/CpeT RY45_RS01455 IPR000847 Transcription regulator HTH, LysR RY45_RS01455 IPR005119 LysR, substrate-binding RY45_RS01455 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01460 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS01465 IPR022605 Protein of unknown function DUF2920 RY45_RS01465 IPR029058 Alpha/Beta hydrolase fold RY45_RS01470 IPR007272 Sulphur transport domain RY45_RS01475 IPR001757 Cation-transporting P-type ATPase RY45_RS01475 IPR004014 Cation-transporting P-type ATPase, N-terminal RY45_RS01475 IPR006068 Cation-transporting P-type ATPase, C-terminal RY45_RS01475 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB RY45_RS01475 IPR008250 P-type ATPase, A domain RY45_RS01475 IPR018303 P-type ATPase, phosphorylation site RY45_RS01475 IPR023214 HAD-like domain RY45_RS01475 IPR023298 P-type ATPase, transmembrane domain RY45_RS01475 IPR023299 P-type ATPase, cytoplasmic domain N RY45_RS01480 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS01485 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS01485 IPR009057 Homeodomain-like RY45_RS01485 IPR018060 DNA binding HTH domain, AraC-type RY45_RS01485 IPR018062 HTH domain AraC-type, conserved site RY45_RS01485 IPR020449 Transcription regulator HTH, AraC- type RY45_RS01490 IPR000620 Drug/metabolite transporter RY45_RS01490 IPR004626 RarD protein RY45_RS01500 IPR015590 Aldehyde dehydrogenase domain RY45_RS01500 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS01500 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS01500 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS01500 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS01500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS01505 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS01505 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS01505 IPR011051 RmlC-like cupin domain RY45_RS01505 IPR013096 Cupin 2, conserved barrel RY45_RS01505 IPR014710 RmlC-like jelly roll fold RY45_RS01510 IPR005814 Aminotransferase class-III RY45_RS01510 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS01510 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS01510 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS01515 IPR010061 Methylmalonate-semialdehyde dehydrogenase RY45_RS01515 IPR015590 Aldehyde dehydrogenase domain RY45_RS01515 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS01515 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS01515 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS01515 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS01520 IPR017926 Glutamine amidotransferase RY45_RS01520 IPR029062 Class I glutamine amidotransferase-like RY45_RS01525 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RY45_RS01525 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RY45_RS01525 IPR008141 Alanine dehydrogenase RY45_RS01525 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RY45_RS01525 IPR016040 NAD(P)-binding domain RY45_RS01530 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RY45_RS01530 IPR011611 Carbohydrate kinase PfkB RY45_RS01530 IPR029056 Ribokinase-like RY45_RS01535 IPR000944 Transcription regulator Rrf2-like RY45_RS01535 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01535 IPR030489 RY45_RS01535 RY45_RS01540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS01540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS01550 IPR003798 DNA recombination RmuC RY45_RS01555 IPR003445 Cation transporter RY45_RS01555 IPR004772 Potassium uptake protein TrkH family RY45_RS01560 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS01560 IPR006036 Potassium uptake protein TrkA RY45_RS01560 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS01560 IPR016040 NAD(P)-binding domain RY45_RS01565 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RY45_RS01565 IPR004573 rRNA small subunit methyltransferase B RY45_RS01565 IPR006027 NusB/RsmB/TIM44 RY45_RS01565 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RY45_RS01565 IPR023267 RNA (C5-cytosine) methyltransferase RY45_RS01565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS01570 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RY45_RS01570 IPR002376 Formyl transferase, N-terminal RY45_RS01570 IPR005793 Formyl transferase, C-terminal RY45_RS01570 IPR005794 Methionyl-tRNA formyltransferase RY45_RS01570 IPR011034 Formyl transferase, C-terminal-like RY45_RS01575 IPR000181 Formylmethionine deformylase RY45_RS01575 IPR023635 Peptide deformylase RY45_RS01580 IPR018392 LysM domain RY45_RS01580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS01585 IPR003488 DNA recombination-mediator protein A RY45_RS01585 IPR010994 RuvA domain 2-like RY45_RS01590 IPR007456 Protein of unknown function DUF494 RY45_RS01595 IPR000380 DNA topoisomerase, type IA RY45_RS01595 IPR013498 DNA topoisomerase, type IA, zn finger RY45_RS01600 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RY45_RS01600 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RY45_RS01605 IPR006070 YrdC-like domain RY45_RS01605 IPR017945 DHBP synthase RibB-like alpha/beta domain RY45_RS01605 IPR023535 Threonylcarbamoyl-AMP synthase RY45_RS01610 IPR001260 Coproporphyrinogen III oxidase, aerobic RY45_RS01610 IPR018375 Coproporphyrinogen III oxidase, conserved site RY45_RS01615 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RY45_RS01615 IPR011342 Shikimate dehydrogenase RY45_RS01615 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RY45_RS01615 IPR016040 NAD(P)-binding domain RY45_RS01615 IPR022893 Shikimate, quinate/shikimate dehydrogenase RY45_RS01620 IPR009962 Protein of unknown function DUF1488 RY45_RS01625 IPR006073 GTP binding domain RY45_RS01625 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RY45_RS01625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01630 IPR009056 Cytochrome c-like domain RY45_RS01630 IPR024167 Cytochrome c4 RY45_RS01640 IPR007336 Der GTPase activator RY45_RS01645 IPR019617 Domain of unknown function DUF2489 RY45_RS01650 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN RY45_RS01650 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS01650 IPR007197 Radical SAM RY45_RS01650 IPR010723 HemN, C-terminal domain RY45_RS01650 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS01655 IPR001365 Adenosine/AMP deaminase domain RY45_RS01655 IPR006330 Adenosine/adenine deaminase RY45_RS01655 IPR028893 Adenosine deaminase RY45_RS01655 IPR032466 RY45_RS01655 RY45_RS01660 IPR001789 Signal transduction response regulator, receiver domain RY45_RS01660 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS01660 IPR002197 DNA binding HTH domain, Fis-type RY45_RS01660 IPR003593 AAA+ ATPase domain RY45_RS01660 IPR009057 Homeodomain-like RY45_RS01660 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) RY45_RS01660 IPR011006 CheY-like superfamily RY45_RS01660 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS01660 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS01660 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS01660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01665 IPR000014 PAS domain RY45_RS01665 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS01665 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS01665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS01665 IPR013767 PAS fold RY45_RS01670 IPR025392 Domain of unknown function DUF4124 RY45_RS01675 IPR001637 Glutamine synthetase class-I, adenylation site RY45_RS01675 IPR004809 Glutamine synthetase type I RY45_RS01675 IPR008146 Glutamine synthetase, catalytic domain RY45_RS01675 IPR008147 Glutamine synthetase, beta-Grasp RY45_RS01675 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RY45_RS01675 IPR027302 Glutamine synthetase, N-terminal conserved site RY45_RS01675 IPR027303 Glutamine synthetase, glycine-rich site RY45_RS01680 IPR000640 Translation elongation factor EFG, V domain RY45_RS01680 IPR000795 Elongation factor, GTP-binding domain RY45_RS01680 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS01680 IPR005225 Small GTP-binding protein domain RY45_RS01680 IPR006298 GTP-binding protein TypA RY45_RS01680 IPR009000 Translation protein, beta-barrel domain RY45_RS01680 IPR009022 Elongation factor G, III-V domain RY45_RS01680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01680 IPR031157 RY45_RS01680 RY45_RS01685 IPR017039 Virulence factor BrkB RY45_RS01685 IPR023679 Uncharacterised protein family UPF0761, bacterial RY45_RS01695 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase RY45_RS01695 IPR023509 D-Tyr tRNAtyr deacylase-like domain RY45_RS01700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS01710 IPR000182 GNAT domain RY45_RS01710 IPR012660 Thioesterase, putative RY45_RS01710 IPR016181 Acyl-CoA N-acyltransferase RY45_RS01710 IPR029069 HotDog domain RY45_RS01715 IPR032712 RY45_RS01715 RY45_RS01720 IPR001650 Helicase, C-terminal RY45_RS01720 IPR004609 ATP-dependent DNA helicase RecG RY45_RS01720 IPR011545 DEAD/DEAH box helicase domain RY45_RS01720 IPR012340 Nucleic acid-binding, OB-fold RY45_RS01720 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01720 IPR033454 RY45_RS01720 RY45_RS01725 IPR001736 Phospholipase D/Transphosphatidylase RY45_RS01725 IPR016270 Phospholipase D, phosphatidylserine synthase type RY45_RS01725 IPR025202 Phospholipase D-like domain RY45_RS01730 IPR003474 Gluconate transporter RY45_RS01735 IPR006001 Carbohydrate kinase, thermoresistant glucokinase RY45_RS01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS01735 IPR031322 RY45_RS01735 RY45_RS01740 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RY45_RS01740 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RY45_RS01740 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RY45_RS01745 IPR000887 KDPG/KHG aldolase RY45_RS01745 IPR013785 Aldolase-type TIM barrel RY45_RS01745 IPR031337 RY45_RS01745 RY45_RS01745 IPR031338 RY45_RS01745 RY45_RS01750 IPR000843 Transcription regulator HTH, LacI RY45_RS01750 IPR001761 Periplasmic binding protein/LacI sugar binding domain RY45_RS01750 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS01750 IPR028082 Periplasmic binding protein-like I RY45_RS01755 IPR001646 Pentapeptide repeat RY45_RS01760 IPR011055 Duplicated hybrid motif RY45_RS01760 IPR016047 Peptidase M23 RY45_RS01765 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent RY45_RS01765 IPR006124 Metalloenzyme RY45_RS01765 IPR011258 BPG-independent PGAM, N-terminal RY45_RS01765 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS01765 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS01770 IPR001763 Rhodanese-like domain RY45_RS01775 IPR003708 Bacterial protein export chaperone SecB RY45_RS01780 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RY45_RS01780 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RY45_RS01780 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS01780 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RY45_RS01780 IPR013328 Dehydrogenase, multihelical RY45_RS01780 IPR016040 NAD(P)-binding domain RY45_RS01785 IPR000361 FeS cluster biogenesis RY45_RS01785 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RY45_RS01785 IPR017726 Fe/S biogenesis protein NfuA RY45_RS01790 IPR029057 Phosphoribosyltransferase-like RY45_RS01795 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS01795 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase RY45_RS01795 IPR029058 Alpha/Beta hydrolase fold RY45_RS01805 IPR021973 SprA-related family RY45_RS01815 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS01815 IPR006641 YqgF/RNase H-like domain RY45_RS01815 IPR010994 RuvA domain 2-like RY45_RS01815 IPR012337 Ribonuclease H-like domain RY45_RS01815 IPR012340 Nucleic acid-binding, OB-fold RY45_RS01815 IPR018974 Tex-like protein, N-terminal RY45_RS01815 IPR022967 RNA-binding domain, S1 RY45_RS01815 IPR023097 Tex RuvX-like domain RY45_RS01815 IPR023319 Tex-like protein, HTH domain RY45_RS01815 IPR023323 Tex-like domain RY45_RS01815 IPR032639 RY45_RS01815 RY45_RS01820 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RY45_RS01820 IPR006358 Transcription elongation factor GreB RY45_RS01820 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RY45_RS01820 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RY45_RS01820 IPR023459 Transcription elongation factor GreA/GreB family RY45_RS01820 IPR028624 Transcription elongation factor GreA/GreB RY45_RS01825 IPR001789 Signal transduction response regulator, receiver domain RY45_RS01825 IPR001867 Signal transduction response regulator, C-terminal RY45_RS01825 IPR011006 CheY-like superfamily RY45_RS01825 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS01825 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS01830 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS01830 IPR003660 HAMP linker domain RY45_RS01830 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS01830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS01835 IPR000620 Drug/metabolite transporter RY45_RS01840 IPR001848 Ribosomal protein S10 RY45_RS01840 IPR018268 Ribosomal protein S10, conserved site RY45_RS01840 IPR027486 Ribosomal protein S10 domain RY45_RS01845 IPR000597 Ribosomal protein L3 RY45_RS01845 IPR009000 Translation protein, beta-barrel domain RY45_RS01845 IPR019926 Ribosomal protein L3, conserved site RY45_RS01845 IPR019927 Ribosomal protein L3, bacterial/organelle-type RY45_RS01850 IPR002136 Ribosomal protein L4/L1e RY45_RS01850 IPR013005 Ribosomal protein L4/L1e, bacterial-type RY45_RS01850 IPR023574 Ribosomal protein L4 domain RY45_RS01855 IPR001014 Ribosomal protein L23/L25, conserved site RY45_RS01855 IPR012677 Nucleotide-binding, alpha-beta plait RY45_RS01855 IPR012678 Ribosomal protein L23/L15e core domain RY45_RS01855 IPR013025 Ribosomal protein L25/L23 RY45_RS01860 IPR002171 Ribosomal protein L2 RY45_RS01860 IPR005880 Ribosomal protein L2, bacterial/organellar-type RY45_RS01860 IPR008991 Translation protein SH3-like domain RY45_RS01860 IPR012340 Nucleic acid-binding, OB-fold RY45_RS01860 IPR014722 Ribosomal protein L2 domain 2 RY45_RS01860 IPR014726 Ribosomal protein L2, domain 3 RY45_RS01860 IPR022666 Ribosomal Proteins L2, RNA binding domain RY45_RS01860 IPR022669 Ribosomal protein L2, C-terminal RY45_RS01865 IPR002222 Ribosomal protein S19/S15 RY45_RS01865 IPR005732 Ribosomal protein S19, bacterial-type RY45_RS01865 IPR020934 Ribosomal protein S19 conserved site RY45_RS01865 IPR023575 Ribosomal protein S19, superfamily RY45_RS01870 IPR001063 Ribosomal protein L22/L17 RY45_RS01870 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RY45_RS01870 IPR018260 Ribosomal protein L22/L17, conserved site RY45_RS01875 IPR001351 Ribosomal protein S3, C-terminal RY45_RS01875 IPR004044 K Homology domain, type 2 RY45_RS01875 IPR004087 K Homology domain RY45_RS01875 IPR005704 Ribosomal protein S3, bacterial RY45_RS01875 IPR009019 K homology domain, prokaryotic type RY45_RS01875 IPR015946 K homology domain-like, alpha/beta RY45_RS01875 IPR018280 Ribosomal protein S3, conserved site RY45_RS01880 IPR000114 Ribosomal protein L16 RY45_RS01880 IPR016180 Ribosomal protein L10e/L16 RY45_RS01880 IPR020798 Ribosomal protein L16, conserved site RY45_RS01885 IPR001854 Ribosomal protein L29 RY45_RS01885 IPR018254 Ribosomal protein L29, conserved site RY45_RS01890 IPR000266 Ribosomal protein S17 RY45_RS01890 IPR012340 Nucleic acid-binding, OB-fold RY45_RS01890 IPR019979 Ribosomal protein S17, conserved site RY45_RS01890 IPR019984 Ribosomal protein S17, bacterial-type RY45_RS01895 IPR000218 Ribosomal protein L14b/L23e RY45_RS01895 IPR005745 Ribosomal protein L14, bacterial-type RY45_RS01895 IPR019972 Ribosomal protein L14 conserved site RY45_RS01900 IPR003256 Ribosomal protein L24 RY45_RS01900 IPR005825 Ribosomal protein L24/L26, conserved site RY45_RS01900 IPR008991 Translation protein SH3-like domain RY45_RS01900 IPR014722 Ribosomal protein L2 domain 2 RY45_RS01905 IPR002132 Ribosomal protein L5 RY45_RS01905 IPR020929 Ribosomal protein L5, conserved site RY45_RS01905 IPR020930 Ribosomal protein L5, bacterial-type RY45_RS01905 IPR022803 Ribosomal protein L5 domain RY45_RS01905 IPR031309 RY45_RS01905 RY45_RS01905 IPR031310 RY45_RS01905 RY45_RS01910 IPR001209 Ribosomal protein S14 RY45_RS01910 IPR018271 Ribosomal protein S14, conserved site RY45_RS01910 IPR023036 Ribosomal protein S14, bacterial/plastid RY45_RS01915 IPR000630 Ribosomal protein S8 RY45_RS01920 IPR000702 Ribosomal protein L6 RY45_RS01920 IPR002358 Ribosomal protein L6, conserved site RY45_RS01920 IPR019906 Ribosomal protein L6, bacterial-type RY45_RS01920 IPR020040 Ribosomal protein L6, alpha-beta domain RY45_RS01925 IPR004389 Ribosomal protein L18, bacterial-type RY45_RS01925 IPR005484 Ribosomal protein L18/L5 RY45_RS01930 IPR000851 Ribosomal protein S5 RY45_RS01930 IPR005324 Ribosomal protein S5, C-terminal RY45_RS01930 IPR005712 Ribosomal protein S5, bacterial-type RY45_RS01930 IPR013810 Ribosomal protein S5, N-terminal RY45_RS01930 IPR014720 Double-stranded RNA-binding domain RY45_RS01930 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS01930 IPR018192 Ribosomal protein S5, N-terminal, conserved site RY45_RS01930 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS01935 IPR001196 Ribosomal protein L15, conserved site RY45_RS01935 IPR005749 Ribosomal protein L15, bacterial-type RY45_RS01935 IPR021131 Ribosomal protein L18e/L15P RY45_RS01935 IPR030878 RY45_RS01935 RY45_RS01940 IPR002208 SecY/SEC61-alpha family RY45_RS01940 IPR023201 SecY subunit domain RY45_RS01940 IPR026593 Protein translocase subunit SecY RY45_RS01940 IPR030659 RY45_RS01940 RY45_RS01945 IPR001892 Ribosomal protein S13 RY45_RS01945 IPR010979 Ribosomal protein S13-like, H2TH RY45_RS01945 IPR018269 Ribosomal protein S13, conserved site RY45_RS01945 IPR019980 Ribosomal protein S13, bacterial-type RY45_RS01945 IPR027437 30s ribosomal protein S13, C-terminal RY45_RS01950 IPR001971 Ribosomal protein S11 RY45_RS01950 IPR018102 Ribosomal S11, conserved site RY45_RS01950 IPR019981 Ribosomal protein S11, bacterial-type RY45_RS01955 IPR001912 Ribosomal protein S4/S9, N-terminal RY45_RS01955 IPR002942 RNA-binding S4 domain RY45_RS01955 IPR005709 Ribosomal protein S4, bacterial-type RY45_RS01955 IPR018079 Ribosomal protein S4, conserved site RY45_RS01955 IPR022801 Ribosomal protein S4/S9 RY45_RS01960 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RY45_RS01960 IPR011260 RNA polymerase, alpha subunit, C-terminal RY45_RS01960 IPR011262 DNA-directed RNA polymerase, insert domain RY45_RS01960 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RY45_RS01960 IPR011773 DNA-directed RNA polymerase, alpha subunit RY45_RS01965 IPR000456 Ribosomal protein L17 RY45_RS02000 IPR026881 WYL domain RY45_RS02005 IPR007360 Invasion gene expression up-regulator, SirB RY45_RS02010 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS02010 IPR004771 K+/H+ exchanger RY45_RS02010 IPR006153 Cation/H+ exchanger RY45_RS02010 IPR016040 NAD(P)-binding domain RY45_RS02015 IPR003680 Flavodoxin-like fold RY45_RS02015 IPR029039 Flavoprotein-like RY45_RS02020 IPR000847 Transcription regulator HTH, LysR RY45_RS02020 IPR005119 LysR, substrate-binding RY45_RS02020 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02025 IPR002347 Glucose/ribitol dehydrogenase RY45_RS02025 IPR016040 NAD(P)-binding domain RY45_RS02025 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS02035 IPR007332 Protein of unknown function DUF411 RY45_RS02035 IPR012336 Thioredoxin-like fold RY45_RS02040 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RY45_RS02040 IPR002470 Peptidase S9A, prolyl oligopeptidase RY45_RS02040 IPR023302 Peptidase S9A, N-terminal domain RY45_RS02040 IPR029058 Alpha/Beta hydrolase fold RY45_RS02045 IPR011852 TRAP transporter solute receptor, TAXI family RY45_RS02050 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RY45_RS02050 IPR011853 TRAP transporter, 4TM/12TM fusion protein RY45_RS02050 IPR021814 Protein of unknown function DUF3394 RY45_RS02055 IPR012506 YhhN-like RY45_RS02060 IPR011701 Major facilitator superfamily RY45_RS02060 IPR020846 Major facilitator superfamily domain RY45_RS02065 IPR006143 RND efflux pump, membrane fusion protein RY45_RS02065 IPR032317 RY45_RS02065 RY45_RS02070 IPR000847 Transcription regulator HTH, LysR RY45_RS02070 IPR005119 LysR, substrate-binding RY45_RS02070 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02075 IPR018551 Domain of unknown function DUF2007 RY45_RS02080 IPR001991 Sodium:dicarboxylate symporter RY45_RS02080 IPR018107 Sodium:dicarboxylate symporter, conserved site RY45_RS02085 IPR019620 Putative metal-binding protein RY45_RS02090 IPR002771 Multiple antibiotic resistance (MarC)-related RY45_RS02095 IPR000847 Transcription regulator HTH, LysR RY45_RS02095 IPR005119 LysR, substrate-binding RY45_RS02095 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02100 IPR003369 Sec-independent protein translocase protein TatA/B/E RY45_RS02100 IPR006312 Sec-independent protein translocase protein TatA/E RY45_RS02105 IPR005272 Conserved hypothetical protein CHP00743 RY45_RS02110 IPR000189 Prokaryotic transglycosylase, active site RY45_RS02110 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS02110 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS02110 IPR023346 Lysozyme-like domain RY45_RS02115 IPR001736 Phospholipase D/Transphosphatidylase RY45_RS02115 IPR025202 Phospholipase D-like domain RY45_RS02120 IPR005804 Fatty acid desaturase, type 1 RY45_RS02120 IPR015876 Fatty acid desaturase, type 1, core RY45_RS02125 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS02125 IPR009057 Homeodomain-like RY45_RS02125 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS02125 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS02125 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS02130 IPR009867 Protein of unknown function DUF1422 RY45_RS02135 IPR009525 Protein of unknown function DUF1145 RY45_RS02140 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS02140 IPR004398 RNA methyltransferase, RsmD RY45_RS02140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS02145 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RY45_RS02145 IPR003593 AAA+ ATPase domain RY45_RS02145 IPR004390 Signal-recognition particle receptor FtsY RY45_RS02145 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RY45_RS02145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS02150 IPR003439 ABC transporter-like RY45_RS02150 IPR003593 AAA+ ATPase domain RY45_RS02150 IPR005286 Cell division protein FtsE, ATP-binding RY45_RS02150 IPR017871 ABC transporter, conserved site RY45_RS02150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS02155 IPR003838 Permease FtsX-like RY45_RS02155 IPR004513 ABC transporter, cell division protein FtsX RY45_RS02160 IPR000943 RNA polymerase sigma-70 RY45_RS02160 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS02160 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS02160 IPR009042 RNA polymerase sigma-70 region 1.2 RY45_RS02160 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02160 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RY45_RS02160 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS02160 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS02160 IPR014284 RNA polymerase sigma-70 like domain RY45_RS02160 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RY45_RS02165 IPR001765 Carbonic anhydrase RY45_RS02165 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RY45_RS02170 IPR000524 Transcription regulator HTH, GntR RY45_RS02170 IPR010248 Histidine utilization repressor RY45_RS02170 IPR011663 UbiC transcription regulator-associated RY45_RS02170 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02170 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RY45_RS02175 IPR005920 Imidazolonepropionase RY45_RS02175 IPR006680 Amidohydrolase 1 RY45_RS02175 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS02175 IPR032466 RY45_RS02175 RY45_RS02180 IPR005923 Formiminoglutamase RY45_RS02180 IPR006035 Ureohydrolase RY45_RS02180 IPR020855 Ureohydrolase, manganese-binding site RY45_RS02180 IPR023696 Ureohydrolase domain RY45_RS02185 IPR023636 Urocanase conserved site RY45_RS02185 IPR023637 Urocanase RY45_RS02190 IPR001106 Aromatic amino acid lyase RY45_RS02190 IPR005921 Histidine ammonia-lyase RY45_RS02190 IPR008948 L-Aspartase-like RY45_RS02190 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RY45_RS02190 IPR024083 Fumarase/histidase, N-terminal RY45_RS02195 IPR004837 Sodium/calcium exchanger membrane region RY45_RS02200 IPR001633 EAL domain RY45_RS02205 IPR000160 GGDEF domain RY45_RS02205 IPR001633 EAL domain RY45_RS02205 IPR029787 Nucleotide cyclase RY45_RS02205 IPR033423 RY45_RS02205 RY45_RS02210 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS02210 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RY45_RS02225 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RY45_RS02235 IPR001775 GspD/PilQ family RY45_RS02235 IPR004846 Type II/III secretion system RY45_RS02235 IPR011514 Secretin, N-terminal RY45_RS02235 IPR011662 Secretin/TonB, short N-terminal RY45_RS02235 IPR013358 Pilus biogenesis, MshL RY45_RS02240 IPR003593 AAA+ ATPase domain RY45_RS02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS02245 IPR011990 Tetratricopeptide-like helical domain RY45_RS02250 IPR001482 Type II secretion system protein E RY45_RS02250 IPR003593 AAA+ ATPase domain RY45_RS02250 IPR007831 General secretory system II, protein E, N-terminal RY45_RS02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS02255 IPR003004 GspF/PilC family RY45_RS02255 IPR018076 Type II secretion system F domain RY45_RS02265 IPR012902 Prokaryotic N-terminal methylation site RY45_RS02270 IPR012902 Prokaryotic N-terminal methylation site RY45_RS02275 IPR012902 Prokaryotic N-terminal methylation site RY45_RS02280 IPR012902 Prokaryotic N-terminal methylation site RY45_RS02285 IPR012902 Prokaryotic N-terminal methylation site RY45_RS02295 IPR013320 Concanavalin A-like lectin/glucanase, subgroup RY45_RS02300 IPR004753 Cell shape determining protein MreB/Mrl RY45_RS02305 IPR007221 Rod shape-determining protein MreC RY45_RS02310 IPR007227 Cell shape-determining protein MreD RY45_RS02310 IPR026034 Cell shape-determining protein MreD, proteobacterial type RY45_RS02315 IPR003697 Maf-like protein RY45_RS02315 IPR029001 Inosine triphosphate pyrophosphatase-like RY45_RS02320 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS02320 IPR004659 Ribonuclease E/G RY45_RS02320 IPR012340 Nucleic acid-binding, OB-fold RY45_RS02320 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RY45_RS02320 IPR022967 RNA-binding domain, S1 RY45_RS02325 IPR011836 Conserved hypothetical protein CHP02099 RY45_RS02325 IPR025263 Domain of unknown function DUF3971 RY45_RS02325 IPR032712 RY45_RS02325 RY45_RS02330 IPR011008 Dimeric alpha-beta barrel RY45_RS02330 IPR013097 Stress responsive alpha-beta barrel RY45_RS02335 IPR001110 Uncharacterised protein family UPF0012, conserved site RY45_RS02335 IPR003010 Carbon-nitrogen hydrolase RY45_RS02340 IPR002510 TldD/PmbA RY45_RS02340 IPR025502 TldD RY45_RS02345 IPR000281 Helix-turn-helix protein RpiR RY45_RS02345 IPR001347 Sugar isomerase (SIS) RY45_RS02345 IPR009057 Homeodomain-like RY45_RS02345 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02350 IPR018635 Uncharacterised protein family UPF0319 RY45_RS02355 IPR023614 Porin domain RY45_RS02360 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS02360 IPR003352 Phosphotransferase system, EIIC RY45_RS02360 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS02365 IPR001347 Sugar isomerase (SIS) RY45_RS02365 IPR005486 Glucokinase regulatory protein, conserved site RY45_RS02365 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ RY45_RS02370 IPR024445 Transposase, ISXO2-like RY45_RS02380 IPR002771 Multiple antibiotic resistance (MarC)-related RY45_RS02385 IPR011701 Major facilitator superfamily RY45_RS02385 IPR020846 Major facilitator superfamily domain RY45_RS02390 IPR002761 DUF71 domain RY45_RS02390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS02395 IPR001789 Signal transduction response regulator, receiver domain RY45_RS02395 IPR003607 HD/PDEase domain RY45_RS02395 IPR006674 HD domain RY45_RS02395 IPR011006 CheY-like superfamily RY45_RS02400 IPR001789 Signal transduction response regulator, receiver domain RY45_RS02400 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS02400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS02400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS02400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS02400 IPR011006 CheY-like superfamily RY45_RS02405 IPR001932 Protein phosphatase 2C (PP2C)-like domain RY45_RS02405 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS02410 IPR002645 STAS domain RY45_RS02415 IPR000014 PAS domain RY45_RS02415 IPR001610 PAC motif RY45_RS02415 IPR002645 STAS domain RY45_RS02415 IPR013655 PAS fold-3 RY45_RS02420 IPR009057 Homeodomain-like RY45_RS02420 IPR018060 DNA binding HTH domain, AraC-type RY45_RS02425 IPR032710 RY45_RS02425 RY45_RS02430 IPR005519 Acid phosphatase (Class B) RY45_RS02430 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA RY45_RS02430 IPR023214 HAD-like domain RY45_RS02435 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RY45_RS02445 IPR013976 Metal-dependent hydrolase HDOD RY45_RS02450 IPR000182 GNAT domain RY45_RS02450 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02455 IPR006153 Cation/H+ exchanger RY45_RS02455 IPR018422 Cation/H+ exchanger, CPA1 family RY45_RS02460 IPR000489 Pterin-binding RY45_RS02460 IPR003726 Homocysteine S-methyltransferase RY45_RS02460 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RY45_RS02460 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RY45_RS02460 IPR006158 Cobalamin (vitamin B12)-binding domain RY45_RS02460 IPR011005 Dihydropteroate synthase-like RY45_RS02460 IPR011822 Cobalamin-dependent methionine synthase RY45_RS02470 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX RY45_RS02470 IPR013651 ATP-grasp fold, RimK-type RY45_RS02470 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS02470 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS02470 IPR016185 Pre-ATP-grasp domain RY45_RS02470 IPR023533 Ribosomal S6 modification enzyme RimK RY45_RS02475 IPR004685 Branched-chain amino acid transport system II carrier protein RY45_RS02480 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS02480 IPR003660 HAMP linker domain RY45_RS02480 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS02485 IPR001789 Signal transduction response regulator, receiver domain RY45_RS02485 IPR001867 Signal transduction response regulator, C-terminal RY45_RS02485 IPR011006 CheY-like superfamily RY45_RS02485 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02485 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS02500 IPR005830 Aerolysin/haemolysin/leukocidin toxin RY45_RS02500 IPR023307 Aerolysin-like toxin, beta complex domain RY45_RS02505 IPR007140 Protein of unknown function DUF350 RY45_RS02510 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RY45_RS02510 IPR016185 Pre-ATP-grasp domain RY45_RS02515 IPR002817 Thiamine biosynthesis protein ThiC RY45_RS02515 IPR025747 ThiC-associated domain RY45_RS02520 IPR003733 Thiamine phosphate synthase RY45_RS02520 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RY45_RS02520 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RY45_RS02520 IPR013785 Aldolase-type TIM barrel RY45_RS02520 IPR022998 Thiamin phosphate synthase superfamily RY45_RS02520 IPR029056 Ribokinase-like RY45_RS02525 IPR000594 UBA/THIF-type NAD/FAD binding fold RY45_RS02525 IPR016040 NAD(P)-binding domain RY45_RS02530 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RY45_RS02530 IPR010035 ThiS, thiamine-biosynthesis RY45_RS02530 IPR012675 Beta-grasp domain RY45_RS02530 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RY45_RS02535 IPR008867 Thiazole biosynthesis RY45_RS02535 IPR013785 Aldolase-type TIM barrel RY45_RS02540 IPR007197 Radical SAM RY45_RS02540 IPR010722 Biotin and thiamin synthesis-associated domain RY45_RS02540 IPR012726 Thiazole biosynthesis ThiH RY45_RS02540 IPR013785 Aldolase-type TIM barrel RY45_RS02550 IPR000182 GNAT domain RY45_RS02550 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02555 IPR014094 Penicillin-binding protein activator LpoB RY45_RS02565 IPR000182 GNAT domain RY45_RS02565 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02575 IPR000014 PAS domain RY45_RS02575 IPR000160 GGDEF domain RY45_RS02575 IPR013656 PAS fold-4 RY45_RS02575 IPR029787 Nucleotide cyclase RY45_RS02585 IPR010331 Exopolysaccharide synthesis, ExoD RY45_RS02590 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS02590 IPR027385 Outer membrane protein beta-barrel RY45_RS02595 IPR000182 GNAT domain RY45_RS02595 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02600 IPR011008 Dimeric alpha-beta barrel RY45_RS02600 IPR014910 Mono-oxygenase, YdhR RY45_RS02605 IPR002577 Helix-turn-helix, HxlR type RY45_RS02605 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02610 IPR000182 GNAT domain RY45_RS02610 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02615 IPR016878 Uncharacterised conserved protein UCP028288 RY45_RS02615 IPR032710 RY45_RS02615 RY45_RS02620 IPR002656 Acyltransferase 3 RY45_RS02625 IPR005625 PepSY-associated TM helix RY45_RS02630 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS02630 IPR010917 TonB-dependent receptor, conserved site RY45_RS02630 IPR012910 TonB-dependent receptor, plug RY45_RS02635 IPR007487 ABC transporter, substrate-binding protein RY45_RS02640 IPR023614 Porin domain RY45_RS02645 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase RY45_RS02650 IPR005358 Putative zinc- or iron-chelating domain containing protein RY45_RS02655 IPR005254 Heme biosynthesis-associated TPR protein RY45_RS02655 IPR010817 HemY, N-terminal RY45_RS02655 IPR011990 Tetratricopeptide-like helical domain RY45_RS02660 IPR007470 HemX RY45_RS02665 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RY45_RS02670 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RY45_RS02670 IPR022417 Porphobilinogen deaminase, N-terminal RY45_RS02670 IPR022418 Porphobilinogen deaminase, C-terminal RY45_RS02670 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RY45_RS02675 IPR000274 Adenylate cyclase, class-I RY45_RS02675 IPR024685 Adenylate cyclase class-I, N-terminal domain RY45_RS02675 IPR024686 Adenylate cyclase class-I, conserved site RY45_RS02680 IPR003140 Phospholipase/carboxylesterase/thioesterase RY45_RS02680 IPR029058 Alpha/Beta hydrolase fold RY45_RS02685 IPR002908 Frataxin/CyaY RY45_RS02685 IPR020895 Frataxin conserved site RY45_RS02690 IPR000183 Ornithine/DAP/Arg decarboxylase RY45_RS02690 IPR002986 Diaminopimelate decarboxylase, LysA RY45_RS02690 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS02690 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RY45_RS02690 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RY45_RS02690 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RY45_RS02690 IPR029066 PLP-binding barrel RY45_RS02695 IPR001653 Diaminopimelate epimerase, DapF RY45_RS02695 IPR018510 Diaminopimelate epimerase, active site RY45_RS02700 IPR007435 Protein of unknown function DUF484 RY45_RS02705 IPR002104 Integrase, catalytic RY45_RS02705 IPR004107 Integrase, SAM-like, N-terminal RY45_RS02705 IPR010998 Integrase, Lambda-type, N-terminal RY45_RS02705 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS02705 IPR011931 Tyrosine recombinase XerC RY45_RS02705 IPR013762 Integrase-like, catalytic core RY45_RS02705 IPR023009 Tyrosine recombinase XerC/XerD RY45_RS02705 IPR023109 Integrase/recombinase, N-terminal RY45_RS02710 IPR006439 HAD hydrolase, subfamily IA RY45_RS02710 IPR023214 HAD-like domain RY45_RS02720 IPR000595 Cyclic nucleotide-binding domain RY45_RS02720 IPR006685 Mechanosensitive ion channel MscS RY45_RS02720 IPR010920 Like-Sm (LSM) domain RY45_RS02720 IPR014710 RmlC-like jelly roll fold RY45_RS02720 IPR018490 Cyclic nucleotide-binding-like RY45_RS02730 IPR011697 Peptidase C26 RY45_RS02730 IPR029062 Class I glutamine amidotransferase-like RY45_RS02735 IPR000150 Cof protein RY45_RS02735 IPR006379 HAD-superfamily hydrolase, subfamily IIB RY45_RS02735 IPR023214 HAD-like domain RY45_RS02740 IPR005526 Septum formation inhibitor MinC, C-terminal RY45_RS02740 IPR005646 Protein of unknown function DUF342 RY45_RS02740 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RY45_RS02750 IPR003439 ABC transporter-like RY45_RS02750 IPR003593 AAA+ ATPase domain RY45_RS02750 IPR017871 ABC transporter, conserved site RY45_RS02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS02760 IPR000412 ABC-2 transporter RY45_RS02765 IPR001453 Molybdopterin binding domain RY45_RS02765 IPR008135 Competence-induced protein CinA RY45_RS02770 IPR006674 HD domain RY45_RS02770 IPR021812 Protein of unknown function DUF3391 RY45_RS02775 IPR005697 Homoserine O-succinyltransferase RY45_RS02775 IPR029062 Class I glutamine amidotransferase-like RY45_RS02780 IPR016130 Protein-tyrosine phosphatase, active site RY45_RS02780 IPR022778 CDKN3 domain RY45_RS02780 IPR029021 Protein-tyrosine phosphatase-like RY45_RS02785 IPR000485 AsnC-type HTH domain RY45_RS02785 IPR011008 Dimeric alpha-beta barrel RY45_RS02785 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS02785 IPR019887 Transcription regulator AsnC-type, C-terminal RY45_RS02785 IPR019888 Transcription regulator AsnC-type RY45_RS02790 IPR000917 Sulfatase RY45_RS02790 IPR012160 Membrane sulfatase, HI1246-related RY45_RS02790 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS02790 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS02795 IPR018841 Protein of unknown function DUF2442 RY45_RS02800 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS02800 IPR010100 TonB-dependent copper receptor RY45_RS02800 IPR012910 TonB-dependent receptor, plug RY45_RS02805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS02805 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS02805 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS02805 IPR015902 Glycoside hydrolase, family 13 RY45_RS02805 IPR017853 Glycoside hydrolase, superfamily RY45_RS02810 IPR003416 MgtC/SapB/SrpB transporter RY45_RS02815 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS02815 IPR016185 Pre-ATP-grasp domain RY45_RS02815 IPR025839 RimK-like ATPgrasp N-terminal domain RY45_RS02820 IPR000182 GNAT domain RY45_RS02820 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02825 IPR022072 Protein of unknown function DUF3624 RY45_RS02830 IPR002347 Glucose/ribitol dehydrogenase RY45_RS02830 IPR016040 NAD(P)-binding domain RY45_RS02830 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS02835 IPR005322 Peptidase C69, dipeptidase A RY45_RS02865 IPR002514 Transposase IS3/IS911family RY45_RS02865 IPR009057 Homeodomain-like RY45_RS02870 IPR001584 Integrase, catalytic core RY45_RS02870 IPR012337 Ribonuclease H-like domain RY45_RS02880 IPR008727 PAAR motif RY45_RS02880 IPR018712 Domain of unknown function DUF2235 RY45_RS02900 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS02900 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS02905 IPR007711 Plasmid maintenance system killer RY45_RS02910 IPR012337 Ribonuclease H-like domain RY45_RS02910 IPR032874 RY45_RS02910 RY45_RS02915 IPR000182 GNAT domain RY45_RS02915 IPR016181 Acyl-CoA N-acyltransferase RY45_RS02920 IPR000489 Pterin-binding RY45_RS02920 IPR006390 Dihydropteroate synthase RY45_RS02920 IPR011005 Dihydropteroate synthase-like RY45_RS02925 IPR000390 Small multidrug resistance protein family RY45_RS02930 IPR002934 Nucleotidyl transferase domain RY45_RS02930 IPR024172 Streptomycin 3''-adenylyltransferase RY45_RS02930 IPR025184 Domain of unknown function DUF4111 RY45_RS02935 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS02935 IPR011004 Trimeric LpxA-like RY45_RS02935 IPR018357 Hexapeptide transferase, conserved site RY45_RS02945 IPR012337 Ribonuclease H-like domain RY45_RS02945 IPR032874 RY45_RS02945 RY45_RS02955 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS02955 IPR003012 Tetracycline transcriptional regulator, TetR RY45_RS02955 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal RY45_RS02955 IPR009057 Homeodomain-like RY45_RS02955 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS02955 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS02955 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS02960 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RY45_RS02960 IPR005829 Sugar transporter, conserved site RY45_RS02960 IPR011701 Major facilitator superfamily RY45_RS02960 IPR020846 Major facilitator superfamily domain RY45_RS02970 IPR001279 Beta-lactamase-like RY45_RS02975 IPR012337 Ribonuclease H-like domain RY45_RS02975 IPR025668 Transposase DDE domain RY45_RS02980 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS02985 IPR004045 Glutathione S-transferase, N-terminal RY45_RS02985 IPR004046 Glutathione S-transferase, C-terminal RY45_RS02985 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS02985 IPR012336 Thioredoxin-like fold RY45_RS02990 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RY45_RS02990 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase RY45_RS02990 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS02990 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS02990 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS02995 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS02995 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain RY45_RS03000 IPR029069 HotDog domain RY45_RS03010 IPR004961 Lipase chaperone RY45_RS03015 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS03015 IPR029058 Alpha/Beta hydrolase fold RY45_RS03020 IPR011990 Tetratricopeptide-like helical domain RY45_RS03025 IPR001189 Manganese/iron superoxide dismutase RY45_RS03025 IPR019831 Manganese/iron superoxide dismutase, N-terminal RY45_RS03025 IPR019832 Manganese/iron superoxide dismutase, C-terminal RY45_RS03025 IPR019833 Manganese/iron superoxide dismutase, binding site RY45_RS03030 IPR003848 Domain of unknown function DUF218 RY45_RS03030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03035 IPR002169 Peptidase M9A/M9B, collagenase, bacterial RY45_RS03045 IPR000259 Fimbrial-type adhesion domain RY45_RS03045 IPR008966 Adhesion domain RY45_RS03055 IPR000015 Outer membrane usher protein RY45_RS03055 IPR025885 PapC, N-terminal domain RY45_RS03055 IPR025949 PapC-like, C-terminal domain RY45_RS03060 IPR001829 Pili assembly chaperone, bacterial RY45_RS03060 IPR008962 PapD-like RY45_RS03060 IPR016147 PapD, N-terminal, bacterial RY45_RS03060 IPR016148 Pili assembly chaperone, C-terminal domain RY45_RS03060 IPR018046 Pili assembly chaperone, conserved site RY45_RS03065 IPR000259 Fimbrial-type adhesion domain RY45_RS03065 IPR008966 Adhesion domain RY45_RS03070 IPR000259 Fimbrial-type adhesion domain RY45_RS03070 IPR008966 Adhesion domain RY45_RS03075 IPR001867 Signal transduction response regulator, C-terminal RY45_RS03075 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03075 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS03080 IPR000873 AMP-dependent synthetase/ligase RY45_RS03080 IPR020845 AMP-binding, conserved site RY45_RS03080 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS03085 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RY45_RS03085 IPR010196 O-succinylbenzoic acid (OSB) synthetase RY45_RS03085 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type RY45_RS03085 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RY45_RS03085 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RY45_RS03085 IPR029017 Enolase N-terminal domain-like RY45_RS03085 IPR029065 Enolase C-terminal domain-like RY45_RS03090 IPR001753 Crotonase superfamily RY45_RS03090 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase RY45_RS03090 IPR014748 Crontonase, C-terminal RY45_RS03090 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RY45_RS03090 IPR029045 ClpP/crotonase-like domain RY45_RS03095 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS03095 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase RY45_RS03095 IPR029058 Alpha/Beta hydrolase fold RY45_RS03100 IPR004433 Menaquinone biosynthesis protein MenD RY45_RS03100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS03100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RY45_RS03100 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS03100 IPR029061 Thiamin diphosphate-binding fold RY45_RS03100 IPR032264 RY45_RS03100 RY45_RS03105 IPR004561 Isochorismate synthase RY45_RS03105 IPR005801 ADC synthase RY45_RS03105 IPR015890 Chorismate binding, C-terminal RY45_RS03110 IPR000537 UbiA prenyltransferase family RY45_RS03110 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase RY45_RS03110 IPR026046 UbiA prenyltransferase domain containing protein 1 RY45_RS03120 IPR005625 PepSY-associated TM helix RY45_RS03120 IPR025711 PepSY domain RY45_RS03130 IPR005358 Putative zinc- or iron-chelating domain containing protein RY45_RS03135 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS03135 IPR001650 Helicase, C-terminal RY45_RS03135 IPR005580 DbpA, RNA-binding RY45_RS03135 IPR011545 DEAD/DEAH box helicase domain RY45_RS03135 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03140 IPR002668 Concentrative nucleoside transporter N-terminal domain RY45_RS03140 IPR008276 Concentrative nucleoside transporter RY45_RS03140 IPR011657 Concentrative nucleoside transporter C-terminal domain RY45_RS03145 IPR007404 Protein of unknown function DUF457 RY45_RS03145 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted RY45_RS03150 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RY45_RS03150 IPR016174 Di-haem cytochrome, transmembrane RY45_RS03155 IPR025711 PepSY domain RY45_RS03160 IPR003791 Protein of unknown function UPF0178 RY45_RS03165 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RY45_RS03170 IPR006685 Mechanosensitive ion channel MscS RY45_RS03170 IPR010920 Like-Sm (LSM) domain RY45_RS03180 IPR001623 DnaJ domain RY45_RS03180 IPR021059 DnaJ-related protein, N-terminal RY45_RS03185 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS03185 IPR006153 Cation/H+ exchanger RY45_RS03185 IPR016040 NAD(P)-binding domain RY45_RS03190 IPR007761 Mannitol repressor RY45_RS03195 IPR000669 Mannitol dehydrogenase RY45_RS03195 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS03195 IPR013118 Mannitol dehydrogenase, C-terminal RY45_RS03195 IPR013131 Mannitol dehydrogenase, N-terminal RY45_RS03195 IPR013328 Dehydrogenase, multihelical RY45_RS03195 IPR016040 NAD(P)-binding domain RY45_RS03195 IPR023027 Mannitol dehydrogenase, conserved site RY45_RS03195 IPR023028 Mannitol-1-phosphate 5-dehydrogenase RY45_RS03200 IPR002178 PTS EIIA type-2 domain RY45_RS03200 IPR003352 Phosphotransferase system, EIIC RY45_RS03200 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS03200 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC RY45_RS03200 IPR016152 Phosphotransferase/anion transporter RY45_RS03200 IPR029503 Phosphotransferase system EIIB component, mannitol-specific RY45_RS03205 IPR007349 Domain of unknown function DUF418 RY45_RS03205 IPR012429 Protein of unknown function DUF1624 RY45_RS03210 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS03210 IPR009057 Homeodomain-like RY45_RS03210 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS03210 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS03215 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS03215 IPR004476 Ribonuclease II/ribonuclease R RY45_RS03215 IPR011129 Cold shock protein RY45_RS03215 IPR011804 Ribonuclease II RY45_RS03215 IPR012340 Nucleic acid-binding, OB-fold RY45_RS03215 IPR013223 Ribonuclease B, N-terminal OB domain RY45_RS03215 IPR022966 Ribonuclease II/R, conserved site RY45_RS03220 IPR000847 Transcription regulator HTH, LysR RY45_RS03220 IPR005119 LysR, substrate-binding RY45_RS03220 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03220 IPR017685 Transcription regulator ArgP RY45_RS03225 IPR001690 Autoinducer synthesis protein RY45_RS03225 IPR016181 Acyl-CoA N-acyltransferase RY45_RS03225 IPR018311 Autoinducer synthesis, conserved site RY45_RS03230 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS03230 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RY45_RS03230 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03230 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS03235 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS03235 IPR004777 L-lysine exporter/arginine exporter RY45_RS03240 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS03240 IPR006146 5'-Nucleotidase, conserved site RY45_RS03240 IPR006179 5'-Nucleotidase/apyrase RY45_RS03240 IPR008334 5'-Nucleotidase, C-terminal RY45_RS03240 IPR029052 Metallo-dependent phosphatase-like RY45_RS03245 IPR008816 Glycine zipper 2TM domain RY45_RS03250 IPR000182 GNAT domain RY45_RS03250 IPR016181 Acyl-CoA N-acyltransferase RY45_RS03255 IPR020483 Uncharacterised protein family YgbA RY45_RS03260 IPR000587 Creatinase, N-terminal RY45_RS03260 IPR000994 Peptidase M24, structural domain RY45_RS03260 IPR028980 Creatinase/Aminopeptidase P, N-terminal RY45_RS03260 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RY45_RS03260 IPR032416 RY45_RS03260 RY45_RS03265 IPR000524 Transcription regulator HTH, GntR RY45_RS03265 IPR008920 Transcription regulator FadR/GntR, C-terminal RY45_RS03265 IPR011711 GntR, C-terminal RY45_RS03265 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03270 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising RY45_RS03270 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal RY45_RS03270 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal RY45_RS03270 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site RY45_RS03275 IPR000397 Heat shock protein Hsp33 RY45_RS03275 IPR016153 Heat shock protein Hsp33, N-terminal RY45_RS03275 IPR016154 Heat shock protein Hsp33, C-terminal RY45_RS03275 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RY45_RS03280 IPR002942 RNA-binding S4 domain RY45_RS03280 IPR025708 Heat shock protein 15 RY45_RS03285 IPR001478 PDZ domain RY45_RS03285 IPR001639 Type II secretion system protein C RY45_RS03285 IPR024961 RY45_RS03285 RY45_RS03290 IPR001775 GspD/PilQ family RY45_RS03290 IPR004845 Type II secretion system GspD, conserved site RY45_RS03290 IPR004846 Type II/III secretion system RY45_RS03290 IPR005644 NolW-like RY45_RS03290 IPR013356 Type II secretion system GspD RY45_RS03295 IPR001482 Type II secretion system protein E RY45_RS03295 IPR003593 AAA+ ATPase domain RY45_RS03295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03300 IPR001992 Type II secretion system conserved site RY45_RS03300 IPR003004 GspF/PilC family RY45_RS03300 IPR011850 General secretion pathway protein F RY45_RS03300 IPR018076 Type II secretion system F domain RY45_RS03305 IPR000983 Bacterial general secretion pathway protein G-type pilin RY45_RS03305 IPR010054 General secretion pathway protein G RY45_RS03305 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03305 IPR013545 Type II secretion system protein G RY45_RS03310 IPR002416 Type II secretion system protein H RY45_RS03310 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03310 IPR022346 General secretion pathway, GspH RY45_RS03315 IPR003413 Type II secretion system protein I domain RY45_RS03315 IPR010052 Type II secretion system protein I RY45_RS03315 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03320 IPR010055 Type II secretion system protein J RY45_RS03320 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03325 IPR005628 General secretion pathway protein K RY45_RS03330 IPR007812 Type II secretion system protein L RY45_RS03330 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RY45_RS03330 IPR025691 GspL periplasmic domain RY45_RS03335 IPR007690 Type II secretion system, protein M RY45_RS03335 IPR023229 Type II secretion system protein M, periplasmic domain RY45_RS03340 IPR000645 Type II secretion system protein N, conserved site RY45_RS03340 IPR022792 Type II secretion system, protein N RY45_RS03345 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS03345 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03345 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS03350 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS03350 IPR002305 Aminoacyl-tRNA synthetase, class Ic RY45_RS03350 IPR002307 Tyrosine-tRNA ligase RY45_RS03350 IPR002942 RNA-binding S4 domain RY45_RS03350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03350 IPR024088 Tyrosine-tRNA ligase, bacterial-type RY45_RS03350 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 RY45_RS03355 IPR006439 HAD hydrolase, subfamily IA RY45_RS03355 IPR023214 HAD-like domain RY45_RS03360 IPR000086 NUDIX hydrolase domain RY45_RS03360 IPR015797 NUDIX hydrolase domain-like RY45_RS03365 IPR000760 Inositol monophosphatase RY45_RS03365 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial RY45_RS03365 IPR020550 Inositol monophosphatase, conserved site RY45_RS03370 IPR018227 Tryptophan/tyrosine permease RY45_RS03375 IPR002547 tRNA-binding domain RY45_RS03375 IPR008231 Export-related chaperone protein CsaA RY45_RS03375 IPR012340 Nucleic acid-binding, OB-fold RY45_RS03380 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS03380 IPR009057 Homeodomain-like RY45_RS03380 IPR018060 DNA binding HTH domain, AraC-type RY45_RS03380 IPR018062 HTH domain AraC-type, conserved site RY45_RS03385 IPR002084 Methionine repressor MetJ RY45_RS03385 IPR010985 Ribbon-helix-helix RY45_RS03385 IPR023453 Methionine repressor MetJ domain RY45_RS03390 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RY45_RS03390 IPR011821 O-succinylhomoserine (thiol)-lyase RY45_RS03390 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS03390 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS03390 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS03395 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS03395 IPR001341 Aspartate kinase domain RY45_RS03395 IPR001342 Homoserine dehydrogenase, catalytic RY45_RS03395 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RY45_RS03395 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I RY45_RS03395 IPR016040 NAD(P)-binding domain RY45_RS03395 IPR018042 Aspartate kinase, conserved site RY45_RS03395 IPR019811 Homoserine dehydrogenase, conserved site RY45_RS03400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS03400 IPR018129 Phosphoenolpyruvate carboxylase, active site RY45_RS03400 IPR021135 Phosphoenolpyruvate carboxylase RY45_RS03400 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RY45_RS03400 IPR033129 RY45_RS03400 RY45_RS03405 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RY45_RS03405 IPR002933 Peptidase M20 RY45_RS03405 IPR010169 Acetylornithine deacetylase (ArgE) RY45_RS03405 IPR011650 Peptidase M20, dimerisation domain RY45_RS03410 IPR000534 Semialdehyde dehydrogenase, NAD-binding RY45_RS03410 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RY45_RS03410 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RY45_RS03410 IPR016040 NAD(P)-binding domain RY45_RS03410 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RY45_RS03415 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS03415 IPR004662 Acetylglutamate kinase RY45_RS03420 IPR002292 Ornithine/putrescine carbamoyltransferase RY45_RS03420 IPR006130 Aspartate/ornithine carbamoyltransferase RY45_RS03420 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RY45_RS03420 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RY45_RS03420 IPR024904 Ornithine carbamoyltransferase RY45_RS03425 IPR001518 Argininosuccinate synthase RY45_RS03425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03425 IPR018223 Argininosuccinate synthase, conserved site RY45_RS03425 IPR023434 Argininosuccinate synthase, type 1 subfamily RY45_RS03425 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RY45_RS03430 IPR000362 Fumarate lyase family RY45_RS03430 IPR008948 L-Aspartase-like RY45_RS03430 IPR009049 Argininosuccinate lyase RY45_RS03430 IPR020557 Fumarate lyase, conserved site RY45_RS03430 IPR022761 Fumarate lyase, N-terminal RY45_RS03430 IPR024083 Fumarase/histidase, N-terminal RY45_RS03430 IPR029419 Argininosuccinate lyase, C-terminal RY45_RS03450 IPR010718 Protein of unknown function DUF1294 RY45_RS03455 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS03455 IPR011004 Trimeric LpxA-like RY45_RS03455 IPR018357 Hexapeptide transferase, conserved site RY45_RS03455 IPR024688 Maltose/galactoside acetyltransferase RY45_RS03460 IPR003416 MgtC/SapB/SrpB transporter RY45_RS03460 IPR025105 Domain of unknown function DUF4010 RY45_RS03465 IPR000957 Sulphate/thiosulphate-binding, conserved site RY45_RS03465 IPR005669 Thiosulphate/Sulfate-binding protein RY45_RS03470 IPR010662 Putative hydrolase RBBP9/YdeN RY45_RS03470 IPR029058 Alpha/Beta hydrolase fold RY45_RS03475 IPR000515 MetI-like domain RY45_RS03475 IPR005667 Sulphate ABC transporter permease protein 2 RY45_RS03475 IPR011865 Sulphate ABC transporter, permease protein CysT RY45_RS03480 IPR000515 MetI-like domain RY45_RS03480 IPR005667 Sulphate ABC transporter permease protein 2 RY45_RS03480 IPR011866 Sulphate ABC transporter, permease protein CysW RY45_RS03485 IPR003439 ABC transporter-like RY45_RS03485 IPR003593 AAA+ ATPase domain RY45_RS03485 IPR005666 Sulphate transport system permease protein 1 RY45_RS03485 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS03485 IPR017871 ABC transporter, conserved site RY45_RS03485 IPR024765 TOBE-like domain RY45_RS03485 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03490 IPR000847 Transcription regulator HTH, LysR RY45_RS03490 IPR005119 LysR, substrate-binding RY45_RS03490 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03495 IPR004302 Chitin-binding, domain 3 RY45_RS03495 IPR014756 Immunoglobulin E-set RY45_RS03500 IPR003660 HAMP linker domain RY45_RS03500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS03500 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS03500 IPR033480 RY45_RS03500 RY45_RS03505 IPR001567 Peptidase M3A/M3B RY45_RS03505 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RY45_RS03505 IPR024079 Metallopeptidase, catalytic domain RY45_RS03510 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS03515 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 RY45_RS03525 IPR024079 Metallopeptidase, catalytic domain RY45_RS03530 IPR001478 PDZ domain RY45_RS03530 IPR005151 Tail specific protease RY45_RS03530 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RY45_RS03530 IPR011659 WD40-like Beta Propeller RY45_RS03530 IPR028204 Tricorn protease C1 domain RY45_RS03530 IPR029045 ClpP/crotonase-like domain RY45_RS03535 IPR005490 L,D-transpeptidase catalytic domain RY45_RS03540 IPR011606 Branched-chain amino acid transport, permease RY45_RS03545 IPR008407 Branched-chain amino acid transport, AzlD RY45_RS03550 IPR016905 Glycyl radical enzyme, HI0521, predicted RY45_RS03555 IPR001989 Radical-activating enzyme, conserved site RY45_RS03555 IPR007197 Radical SAM RY45_RS03555 IPR012839 Glycyl radical enzyme activase RY45_RS03555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS03555 IPR023912 Glycyl radical enzyme activase, YjjW, bact RY45_RS03560 IPR014949 Protein of unknown function DUF1820 RY45_RS03565 IPR000847 Transcription regulator HTH, LysR RY45_RS03565 IPR005119 LysR, substrate-binding RY45_RS03565 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03570 IPR000796 Aspartate/other aminotransferase RY45_RS03570 IPR004839 Aminotransferase, class I/classII RY45_RS03570 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS03570 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS03575 IPR003735 Metal-sensitive transcriptional repressor RY45_RS03580 IPR002524 Cation efflux protein RY45_RS03580 IPR027469 Cation efflux protein transmembrane domain RY45_RS03590 IPR004193 Glycoside hydrolase, family 13, N-terminal RY45_RS03590 IPR005323 Bacterial pullanase-associated domain RY45_RS03590 IPR011839 Alpha-1,6-glucosidases, pullulanase-type RY45_RS03590 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS03590 IPR013783 Immunoglobulin-like fold RY45_RS03590 IPR013784 Carbohydrate-binding-like fold RY45_RS03590 IPR014756 Immunoglobulin E-set RY45_RS03590 IPR015902 Glycoside hydrolase, family 13 RY45_RS03590 IPR017853 Glycoside hydrolase, superfamily RY45_RS03590 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal RY45_RS03595 IPR001757 Cation-transporting P-type ATPase RY45_RS03595 IPR006121 Heavy metal-associated domain, HMA RY45_RS03595 IPR008250 P-type ATPase, A domain RY45_RS03595 IPR017969 Heavy-metal-associated, conserved site RY45_RS03595 IPR018303 P-type ATPase, phosphorylation site RY45_RS03595 IPR023214 HAD-like domain RY45_RS03595 IPR023299 P-type ATPase, cytoplasmic domain N RY45_RS03595 IPR027256 Cation-transporting P-type ATPase, subfamily IB RY45_RS03600 IPR002065 Putative thiol peroxidase Tpx RY45_RS03600 IPR012336 Thioredoxin-like fold RY45_RS03600 IPR013740 Redoxin RY45_RS03600 IPR018219 Thiol peroxidase conserved site RY45_RS03610 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS03610 IPR001650 Helicase, C-terminal RY45_RS03610 IPR011545 DEAD/DEAH box helicase domain RY45_RS03610 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS03610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03615 IPR029052 Metallo-dependent phosphatase-like RY45_RS03625 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS03630 IPR000014 PAS domain RY45_RS03630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS03630 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS03630 IPR013655 PAS fold-3 RY45_RS03635 IPR003675 CAAX amino terminal protease RY45_RS03645 IPR008249 Uncharacterised protein family UPF0231 RY45_RS03650 IPR008599 Putative sugar diacid recognition RY45_RS03650 IPR025736 PucR C-terminal helix-turn-helix domain RY45_RS03655 IPR003474 Gluconate transporter RY45_RS03660 IPR004381 Glycerate kinase RY45_RS03660 IPR018193 Glycerate kinase, flavodoxin-like domain RY45_RS03665 IPR009915 NnrU RY45_RS03670 IPR000889 Glutathione peroxidase RY45_RS03670 IPR012336 Thioredoxin-like fold RY45_RS03675 IPR000847 Transcription regulator HTH, LysR RY45_RS03675 IPR005119 LysR, substrate-binding RY45_RS03675 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03680 IPR002668 Concentrative nucleoside transporter N-terminal domain RY45_RS03680 IPR008276 Concentrative nucleoside transporter RY45_RS03680 IPR011642 Nucleoside recognition Gate RY45_RS03680 IPR011657 Concentrative nucleoside transporter C-terminal domain RY45_RS03685 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RY45_RS03685 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RY45_RS03685 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03685 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RY45_RS03685 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RY45_RS03690 IPR000352 Peptide chain release factor class I/class II RY45_RS03695 IPR002187 Nitrogen regulatory protein PII RY45_RS03695 IPR002332 Nitrogen regulatory protein P-II, urydylation site RY45_RS03695 IPR011322 Nitrogen regulatory PII-like, alpha/beta RY45_RS03695 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RY45_RS03695 IPR017918 Nitrogen regulatory protein PII, conserved site RY45_RS03700 IPR026045 Ferric binding protein RY45_RS03705 IPR000515 MetI-like domain RY45_RS03710 IPR003439 ABC transporter-like RY45_RS03710 IPR003593 AAA+ ATPase domain RY45_RS03710 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS03710 IPR017871 ABC transporter, conserved site RY45_RS03710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03715 IPR006314 Dyp-type peroxidase RY45_RS03715 IPR011008 Dimeric alpha-beta barrel RY45_RS03720 IPR001669 Arginine repressor RY45_RS03720 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03720 IPR020899 Arginine repressor, C-terminal RY45_RS03720 IPR020900 Arginine repressor, DNA-binding domain RY45_RS03720 IPR024946 Arginine repressor C-terminal-like domain RY45_RS03725 IPR003439 ABC transporter-like RY45_RS03725 IPR003593 AAA+ ATPase domain RY45_RS03725 IPR017871 ABC transporter, conserved site RY45_RS03725 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03725 IPR030679 RY45_RS03725 RY45_RS03730 IPR001320 Ionotropic glutamate receptor RY45_RS03730 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS03730 IPR018313 Extracellular solute-binding protein, family 3, conserved site RY45_RS03735 IPR000515 MetI-like domain RY45_RS03735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS03740 IPR000515 MetI-like domain RY45_RS03745 IPR001236 Lactate/malate dehydrogenase, N-terminal RY45_RS03745 IPR001252 Malate dehydrogenase, active site RY45_RS03745 IPR001557 L-lactate/malate dehydrogenase RY45_RS03745 IPR010097 Malate dehydrogenase, type 1 RY45_RS03745 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RY45_RS03745 IPR016040 NAD(P)-binding domain RY45_RS03745 IPR022383 Lactate/malate dehydrogenase, C-terminal RY45_RS03745 IPR023958 Malate dehydrogenase, type 1, bacterial RY45_RS03755 IPR006597 Sel1-like RY45_RS03755 IPR011990 Tetratricopeptide-like helical domain RY45_RS03760 IPR000971 Globin RY45_RS03760 IPR001221 Phenol hydroxylase reductase RY45_RS03760 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS03760 IPR008333 Oxidoreductase, FAD-binding domain RY45_RS03760 IPR009050 Globin-like RY45_RS03760 IPR012292 Globin, structural domain RY45_RS03760 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS03760 IPR023950 Flavohemoprotein RY45_RS03765 IPR000944 Transcription regulator Rrf2-like RY45_RS03765 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03770 IPR000644 CBS domain RY45_RS03770 IPR002550 Domain of unknown function DUF21 RY45_RS03770 IPR005170 Transporter-associated domain RY45_RS03770 IPR016166 FAD-binding, type 2 RY45_RS03770 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS03775 IPR002541 Cytochrome c assembly protein RY45_RS03780 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RY45_RS03780 IPR003593 AAA+ ATPase domain RY45_RS03780 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RY45_RS03780 IPR004780 Signal recognition particle protein Ffh RY45_RS03780 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RY45_RS03780 IPR022941 Signal recognition particle, SRP54 subunit RY45_RS03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS03785 IPR000307 Ribosomal protein S16 RY45_RS03785 IPR023803 Ribosomal protein S16 domain RY45_RS03790 IPR002676 RimM protein RY45_RS03790 IPR009000 Translation protein, beta-barrel domain RY45_RS03790 IPR011033 PRC-barrel-like RY45_RS03790 IPR011961 16S rRNA processing protein RimM RY45_RS03790 IPR027275 PRC-barrel domain RY45_RS03795 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RY45_RS03795 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RY45_RS03795 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RY45_RS03795 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS03795 IPR029028 Alpha/beta knot methyltransferases RY45_RS03800 IPR001857 Ribosomal protein L19 RY45_RS03800 IPR008991 Translation protein SH3-like domain RY45_RS03800 IPR018257 Ribosomal protein L19, conserved site RY45_RS03805 IPR013783 Immunoglobulin-like fold RY45_RS03805 IPR014756 Immunoglobulin E-set RY45_RS03810 IPR004230 DNA mismatch repair protein MutH RY45_RS03810 IPR011335 Restriction endonuclease type II-like RY45_RS03810 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II RY45_RS03820 IPR000086 NUDIX hydrolase domain RY45_RS03820 IPR015797 NUDIX hydrolase domain-like RY45_RS03820 IPR020084 NUDIX hydrolase, conserved site RY45_RS03820 IPR020476 NUDIX hydrolase RY45_RS03820 IPR022927 RNA pyrophosphohydrolase RppH RY45_RS03825 IPR000121 PEP-utilising enzyme, C-terminal RY45_RS03825 IPR003018 GAF domain RY45_RS03825 IPR006318 Phosphoenolpyruvate-utilising enzyme RY45_RS03825 IPR008279 PEP-utilising enzyme, mobile domain RY45_RS03825 IPR008731 Phosphotransferase system, enzyme I N-terminal RY45_RS03825 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS03825 IPR018274 PEP-utilising enzyme, active site RY45_RS03825 IPR029016 GAF domain-like RY45_RS03830 IPR001640 Prolipoprotein diacylglyceryl transferase RY45_RS03835 IPR000398 Thymidylate synthase RY45_RS03835 IPR020940 Thymidylate synthase, active site RY45_RS03835 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RY45_RS03840 IPR004670 Na+/H+ antiporter NhaA RY45_RS03840 IPR023171 Na/H antiporter domain RY45_RS03850 IPR000847 Transcription regulator HTH, LysR RY45_RS03850 IPR005119 LysR, substrate-binding RY45_RS03850 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03855 IPR001845 HTH ArsR-type DNA-binding domain RY45_RS03855 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS03860 IPR002583 Ribosomal protein S20 RY45_RS03865 IPR004268 Flagellin assembly, membrane protein MviN RY45_RS03870 IPR002606 Riboflavin kinase, bacterial RY45_RS03870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03870 IPR015864 FAD synthetase RY45_RS03870 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RY45_RS03870 IPR023465 Riboflavin kinase domain RY45_RS03870 IPR023468 Riboflavin kinase RY45_RS03875 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS03875 IPR002300 Aminoacyl-tRNA synthetase, class Ia RY45_RS03875 IPR002301 Isoleucine-tRNA ligase RY45_RS03875 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RY45_RS03875 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS03875 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RY45_RS03875 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RY45_RS03875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03875 IPR023585 Isoleucine-tRNA ligase, type 1 RY45_RS03880 IPR001872 Peptidase A8, signal peptidase II RY45_RS03885 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS03885 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RY45_RS03890 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RY45_RS03895 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03895 IPR018247 EF-Hand 1, calcium-binding site RY45_RS03895 IPR022346 General secretion pathway, GspH RY45_RS03900 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03900 IPR013362 Pilus modification type IV, PilV RY45_RS03905 IPR032092 RY45_RS03905 RY45_RS03910 IPR025205 PilX/PilW C-terminal domain RY45_RS03910 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RY45_RS03915 IPR008707 PilC beta-propeller domain RY45_RS03915 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RY45_RS03915 IPR018247 EF-Hand 1, calcium-binding site RY45_RS03920 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03920 IPR031982 RY45_RS03920 RY45_RS03925 IPR000983 Bacterial general secretion pathway protein G-type pilin RY45_RS03925 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03925 IPR031982 RY45_RS03925 RY45_RS03930 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03930 IPR022346 General secretion pathway, GspH RY45_RS03935 IPR016419 Prepilin peptidase-dependent protein B, predicted RY45_RS03945 IPR012902 Prokaryotic N-terminal methylation site RY45_RS03950 IPR003010 Carbon-nitrogen hydrolase RY45_RS03950 IPR003694 NAD(+) synthetase RY45_RS03950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS03950 IPR022310 NAD/GMP synthase RY45_RS03955 IPR002187 Nitrogen regulatory protein PII RY45_RS03955 IPR002332 Nitrogen regulatory protein P-II, urydylation site RY45_RS03955 IPR011322 Nitrogen regulatory PII-like, alpha/beta RY45_RS03955 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RY45_RS03955 IPR017918 Nitrogen regulatory protein PII, conserved site RY45_RS03960 IPR023346 Lysozyme-like domain RY45_RS03965 IPR003815 S-ribosylhomocysteinase (LuxS) RY45_RS03965 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RY45_RS03970 IPR000160 GGDEF domain RY45_RS03970 IPR029787 Nucleotide cyclase RY45_RS03975 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS03975 IPR004476 Ribonuclease II/ribonuclease R RY45_RS03975 IPR011129 Cold shock protein RY45_RS03975 IPR011805 Ribonuclease R RY45_RS03975 IPR012340 Nucleic acid-binding, OB-fold RY45_RS03975 IPR013223 Ribonuclease B, N-terminal OB domain RY45_RS03975 IPR013668 Ribonuclease R winged-helix domain RY45_RS03975 IPR022966 Ribonuclease II/R, conserved site RY45_RS03975 IPR022967 RNA-binding domain, S1 RY45_RS03980 IPR021681 Protein of unknown function DUF3265 RY45_RS03985 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS03985 IPR004441 RNA methyltransferase TrmH family RY45_RS03985 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RY45_RS03985 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RY45_RS03985 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS03985 IPR029028 Alpha/beta knot methyltransferases RY45_RS03985 IPR029064 50S ribosomal protein L30e-like RY45_RS03990 IPR000595 Cyclic nucleotide-binding domain RY45_RS03990 IPR014710 RmlC-like jelly roll fold RY45_RS03990 IPR018490 Cyclic nucleotide-binding-like RY45_RS03995 IPR000182 GNAT domain RY45_RS03995 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04000 IPR000620 Drug/metabolite transporter RY45_RS04005 IPR000620 Drug/metabolite transporter RY45_RS04010 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RY45_RS04015 IPR001046 NRAMP family RY45_RS04020 IPR000529 Ribosomal protein S6 RY45_RS04020 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RY45_RS04020 IPR020814 Ribosomal protein S6, plastid/chloroplast RY45_RS04025 IPR001648 Ribosomal protein S18 RY45_RS04025 IPR018275 Ribosomal protein S18, conserved site RY45_RS04030 IPR000244 Ribosomal protein L9 RY45_RS04030 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RY45_RS04030 IPR020069 Ribosomal protein L9, C-terminal RY45_RS04030 IPR020070 Ribosomal protein L9, N-terminal RY45_RS04030 IPR020594 Ribosomal protein L9, bacteria/chloroplast RY45_RS04035 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS04035 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS04050 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS04050 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RY45_RS04050 IPR011032 GroES (chaperonin 10)-like RY45_RS04050 IPR013154 Alcohol dehydrogenase GroES-like RY45_RS04050 IPR016040 NAD(P)-binding domain RY45_RS04050 IPR020843 Polyketide synthase, enoylreductase RY45_RS04055 IPR020143 Uncharacterised protein family, RP436 RY45_RS04055 IPR032816 RY45_RS04055 RY45_RS04055 IPR032818 RY45_RS04055 RY45_RS04060 IPR007863 Peptidase M16, C-terminal domain RY45_RS04060 IPR011237 Peptidase M16 domain RY45_RS04060 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RY45_RS04060 IPR011765 Peptidase M16, N-terminal RY45_RS04065 IPR006334 Glutamate--cysteine ligase, monofunctional RY45_RS04065 IPR007370 Glutamate--cysteine ligase RY45_RS04070 IPR027839 Protein of unknown function DUF4432 RY45_RS04075 IPR000873 AMP-dependent synthetase/ligase RY45_RS04075 IPR020845 AMP-binding, conserved site RY45_RS04080 IPR012336 Thioredoxin-like fold RY45_RS04085 IPR000182 GNAT domain RY45_RS04085 IPR006464 Ribosomal-protein-alanine acetyltransferase RY45_RS04085 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04090 IPR004615 DNA polymerase III, psi subunit RY45_RS04095 IPR003593 AAA+ ATPase domain RY45_RS04095 IPR011704 ATPase, dynein-related, AAA domain RY45_RS04095 IPR022547 ATPase, RavA, C-terminal RY45_RS04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04100 IPR002035 von Willebrand factor, type A RY45_RS04100 IPR008912 Uncharacterised protein family CoxE-like RY45_RS04105 IPR000160 GGDEF domain RY45_RS04105 IPR011990 Tetratricopeptide-like helical domain RY45_RS04105 IPR019734 Tetratricopeptide repeat RY45_RS04105 IPR029787 Nucleotide cyclase RY45_RS04110 IPR000795 Elongation factor, GTP-binding domain RY45_RS04110 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS04110 IPR004548 Peptide chain release factor 3 RY45_RS04110 IPR005225 Small GTP-binding protein domain RY45_RS04110 IPR009000 Translation protein, beta-barrel domain RY45_RS04110 IPR009022 Elongation factor G, III-V domain RY45_RS04110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04110 IPR031157 RY45_RS04110 RY45_RS04110 IPR032090 RY45_RS04110 RY45_RS04115 IPR008317 Uncharacterised conserved protein UCP030561 RY45_RS04115 IPR009959 Polyketide cyclase SnoaL-like domain RY45_RS04115 IPR032710 RY45_RS04115 RY45_RS04120 IPR000835 MarR-type HTH domain RY45_RS04120 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04125 IPR003779 Carboxymuconolactone decarboxylase-like RY45_RS04125 IPR004675 Alkylhydroperoxidase AhpD core RY45_RS04125 IPR029032 AhpD-like RY45_RS04135 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RY45_RS04135 IPR013785 Aldolase-type TIM barrel RY45_RS04140 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS04140 IPR009057 Homeodomain-like RY45_RS04140 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS04140 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS04140 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS04145 IPR007569 Domain of unknown function DUF559 RY45_RS04145 IPR011335 Restriction endonuclease type II-like RY45_RS04150 IPR000847 Transcription regulator HTH, LysR RY45_RS04150 IPR005119 LysR, substrate-binding RY45_RS04150 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04155 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type RY45_RS04155 IPR017754 Agmatine deiminase RY45_RS04160 IPR000120 Amidase RY45_RS04160 IPR023631 Amidase signature domain RY45_RS04165 IPR010261 Tir chaperone protein (CesT) family RY45_RS04175 IPR001018 Beta-lactamase, class-B, conserved site RY45_RS04175 IPR001279 Beta-lactamase-like RY45_RS04190 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS04190 IPR001650 Helicase, C-terminal RY45_RS04190 IPR011545 DEAD/DEAH box helicase domain RY45_RS04190 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS04190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04195 IPR008517 Protein of unknown function DUF799 RY45_RS04200 IPR014508 Uncharacterised conserved protein, TPR-like repeat RY45_RS04205 IPR005534 Curli production assembly/transport component CsgG RY45_RS04205 IPR007195 TolB, N-terminal RY45_RS04210 IPR000847 Transcription regulator HTH, LysR RY45_RS04210 IPR005119 LysR, substrate-binding RY45_RS04210 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04215 IPR011701 Major facilitator superfamily RY45_RS04215 IPR020846 Major facilitator superfamily domain RY45_RS04225 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase RY45_RS04225 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal RY45_RS04225 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal RY45_RS04230 IPR004852 Di-haem cytochrome c peroxidase RY45_RS04230 IPR009056 Cytochrome c-like domain RY45_RS04230 IPR018247 EF-Hand 1, calcium-binding site RY45_RS04240 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS04240 IPR011004 Trimeric LpxA-like RY45_RS04245 IPR001568 Ribonuclease T2-like RY45_RS04245 IPR018188 Ribonuclease T2, active site RY45_RS04245 IPR033130 RY45_RS04245 RY45_RS04255 IPR004136 2-nitropropane dioxygenase, NPD RY45_RS04255 IPR013785 Aldolase-type TIM barrel RY45_RS04290 IPR000086 NUDIX hydrolase domain RY45_RS04290 IPR015797 NUDIX hydrolase domain-like RY45_RS04290 IPR020084 NUDIX hydrolase, conserved site RY45_RS04290 IPR020476 NUDIX hydrolase RY45_RS04295 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS04295 IPR003660 HAMP linker domain RY45_RS04295 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS04295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS04300 IPR001789 Signal transduction response regulator, receiver domain RY45_RS04300 IPR001867 Signal transduction response regulator, C-terminal RY45_RS04300 IPR011006 CheY-like superfamily RY45_RS04300 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04300 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS04305 IPR006143 RND efflux pump, membrane fusion protein RY45_RS04305 IPR032317 RY45_RS04305 RY45_RS04310 IPR003439 ABC transporter-like RY45_RS04310 IPR003593 AAA+ ATPase domain RY45_RS04310 IPR003838 Permease FtsX-like RY45_RS04310 IPR017871 ABC transporter, conserved site RY45_RS04310 IPR025857 MacB-like periplasmic core domain RY45_RS04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04315 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS04320 IPR003439 ABC transporter-like RY45_RS04320 IPR003593 AAA+ ATPase domain RY45_RS04320 IPR017871 ABC transporter, conserved site RY45_RS04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04320 IPR030679 RY45_RS04320 RY45_RS04325 IPR000515 MetI-like domain RY45_RS04325 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS04330 IPR000515 MetI-like domain RY45_RS04330 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS04335 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RY45_RS04335 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS04340 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RY45_RS04340 IPR002470 Peptidase S9A, prolyl oligopeptidase RY45_RS04340 IPR002471 Peptidase S9, serine active site RY45_RS04340 IPR023302 Peptidase S9A, N-terminal domain RY45_RS04340 IPR029058 Alpha/Beta hydrolase fold RY45_RS04350 IPR007844 AsmA RY45_RS04355 IPR000182 GNAT domain RY45_RS04355 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04360 IPR002347 Glucose/ribitol dehydrogenase RY45_RS04360 IPR016040 NAD(P)-binding domain RY45_RS04360 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS04365 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RY45_RS04365 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RY45_RS04365 IPR023057 Glutamate-ammonia-ligase adenylyltransferase RY45_RS04370 IPR000182 GNAT domain RY45_RS04370 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04375 IPR003660 HAMP linker domain RY45_RS04375 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS04380 IPR013099 Two pore domain potassium channel domain RY45_RS04380 IPR027359 Voltage-dependent channel, four helix bundle domain RY45_RS04380 IPR028325 Voltage-gated potassium channel RY45_RS04385 IPR003646 SH3-like domain, bacterial-type RY45_RS04385 IPR016476 SH3 domain protein RY45_RS04390 IPR002872 Proline dehydrogenase domain RY45_RS04390 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RY45_RS04390 IPR015590 Aldehyde dehydrogenase domain RY45_RS04390 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS04390 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS04390 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS04390 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS04390 IPR024082 Proline dehydrogenase PutA, domain II RY45_RS04390 IPR024089 Proline dehydrogenase PutA, domain I/II RY45_RS04390 IPR025703 Bifunctional protein PutA RY45_RS04390 IPR029041 FAD-linked oxidoreductase-like RY45_RS04395 IPR000086 NUDIX hydrolase domain RY45_RS04395 IPR015376 Zinc ribbon, NADH pyrophosphatase RY45_RS04395 IPR015797 NUDIX hydrolase domain-like RY45_RS04395 IPR020084 NUDIX hydrolase, conserved site RY45_RS04405 IPR000600 ROK RY45_RS04410 IPR006422 D-erythrose-4-phosphate dehydrogenase RY45_RS04410 IPR016040 NAD(P)-binding domain RY45_RS04410 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RY45_RS04410 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RY45_RS04410 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RY45_RS04415 IPR001576 Phosphoglycerate kinase RY45_RS04415 IPR015824 Phosphoglycerate kinase, N-terminal RY45_RS04415 IPR015901 Phosphoglycerate kinase, C-terminal RY45_RS04415 IPR015911 Phosphoglycerate kinase, conserved site RY45_RS04420 IPR000771 Ketose-bisphosphate aldolase, class-II RY45_RS04420 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype RY45_RS04420 IPR013785 Aldolase-type TIM barrel RY45_RS04425 IPR006076 FAD dependent oxidoreductase RY45_RS04425 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS04435 IPR003834 Cytochrome c assembly protein, transmembrane domain RY45_RS04435 IPR012336 Thioredoxin-like fold RY45_RS04435 IPR017937 Thioredoxin, conserved site RY45_RS04435 IPR022910 Thiol:disulphide interchange protein DsbD RY45_RS04435 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RY45_RS04440 IPR004323 Divalent ion tolerance protein, CutA RY45_RS04440 IPR011322 Nitrogen regulatory PII-like, alpha/beta RY45_RS04450 IPR007896 Transmembrane pair, bacterial RY45_RS04455 IPR000847 Transcription regulator HTH, LysR RY45_RS04455 IPR005119 LysR, substrate-binding RY45_RS04455 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04460 IPR006222 Glycine cleavage T-protein, N-terminal RY45_RS04460 IPR017703 YgfZ/GcvT conserved site RY45_RS04460 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RY45_RS04465 IPR005631 Flavinator of succinate dehydrogenase RY45_RS04475 IPR003953 FAD binding domain RY45_RS04475 IPR005288 L-aspartate oxidase RY45_RS04475 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RY45_RS04475 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS04475 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RY45_RS04480 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RY45_RS04480 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS04480 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04480 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RY45_RS04480 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS04480 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS04480 IPR014284 RNA polymerase sigma-70 like domain RY45_RS04480 IPR014286 RNA polymerase sigma-70 RpoE type RY45_RS04485 IPR005572 Anti sigma-E protein RseA, N-terminal RY45_RS04485 IPR005573 Anti sigma-E protein RseA, C-terminal RY45_RS04485 IPR026279 Sigma-E factor negative regulatory protein RseA RY45_RS04490 IPR005588 MucB/RseB RY45_RS04490 IPR033434 RY45_RS04490 RY45_RS04490 IPR033436 RY45_RS04490 RY45_RS04495 IPR007359 Positive regulator of sigma(E), RseC/MucC RY45_RS04495 IPR026268 Protein RseC RY45_RS04500 IPR000640 Translation elongation factor EFG, V domain RY45_RS04500 IPR000795 Elongation factor, GTP-binding domain RY45_RS04500 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS04500 IPR005225 Small GTP-binding protein domain RY45_RS04500 IPR006297 Elongation factor 4 RY45_RS04500 IPR009022 Elongation factor G, III-V domain RY45_RS04500 IPR013842 GTP-binding protein LepA, C-terminal RY45_RS04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04500 IPR031157 RY45_RS04500 RY45_RS04505 IPR000223 Peptidase S26A, signal peptidase I RY45_RS04505 IPR015927 Peptidase S24/S26A/S26B/S26C RY45_RS04505 IPR019533 Peptidase S26 RY45_RS04505 IPR019756 Peptidase S26A, signal peptidase I, serine active site RY45_RS04505 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RY45_RS04505 IPR019758 Peptidase S26A, signal peptidase I, conserved site RY45_RS04505 IPR019759 Peptidase S24/S26A/S26B RY45_RS04505 IPR019766 Peptidase S26A, all-beta subdomain RY45_RS04505 IPR028360 Peptidase S24/S26, beta-ribbon domain RY45_RS04510 IPR000999 Ribonuclease III domain RY45_RS04510 IPR011907 Ribonuclease III RY45_RS04510 IPR014720 Double-stranded RNA-binding domain RY45_RS04515 IPR004044 K Homology domain, type 2 RY45_RS04515 IPR005225 Small GTP-binding protein domain RY45_RS04515 IPR005662 GTP-binding protein Era RY45_RS04515 IPR006073 GTP binding domain RY45_RS04515 IPR009019 K homology domain, prokaryotic type RY45_RS04515 IPR015946 K homology domain-like, alpha/beta RY45_RS04515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04520 IPR003717 Recombination protein O, RecO RY45_RS04520 IPR012340 Nucleic acid-binding, OB-fold RY45_RS04520 IPR022572 DNA replication/recombination mediator RecO, N-terminal RY45_RS04525 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RY45_RS04525 IPR013785 Aldolase-type TIM barrel RY45_RS04530 IPR013785 Aldolase-type TIM barrel RY45_RS04530 IPR017853 Glycoside hydrolase, superfamily RY45_RS04535 IPR000771 Ketose-bisphosphate aldolase, class-II RY45_RS04535 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY RY45_RS04535 IPR013785 Aldolase-type TIM barrel RY45_RS04540 IPR003764 N-acetylglucosamine-6-phosphate deacetylase RY45_RS04540 IPR006680 Amidohydrolase 1 RY45_RS04540 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS04540 IPR032466 RY45_RS04540 RY45_RS04545 IPR004701 Phosphotransferase system, mannose-type IIA component RY45_RS04550 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component RY45_RS04555 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit RY45_RS04560 IPR004720 Phosphotransferase system, sorbose subfamily IIB component RY45_RS04560 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup RY45_RS04565 IPR001347 Sugar isomerase (SIS) RY45_RS04565 IPR014180 Sugar isomerase, AgaS RY45_RS04570 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ RY45_RS04570 IPR013785 Aldolase-type TIM barrel RY45_RS04575 IPR001034 HTH DeoR N-terminal domain RY45_RS04575 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04575 IPR014036 DeoR C-terminal sensor domain RY45_RS04575 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RY45_RS04580 IPR002477 Peptidoglycan binding-like RY45_RS04580 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RY45_RS04585 IPR009921 Domain of unknown function DUF1456 RY45_RS04590 IPR001789 Signal transduction response regulator, receiver domain RY45_RS04590 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS04590 IPR003660 HAMP linker domain RY45_RS04590 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS04590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS04590 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS04590 IPR011006 CheY-like superfamily RY45_RS04590 IPR019247 Histidine kinase BarA, N-terminal RY45_RS04595 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RY45_RS04595 IPR002792 TRAM domain RY45_RS04595 IPR010280 (Uracil-5)-methyltransferase family RY45_RS04595 IPR012340 Nucleic acid-binding, OB-fold RY45_RS04595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS04595 IPR030390 RY45_RS04595 RY45_RS04595 IPR030391 RY45_RS04595 RY45_RS04600 IPR002912 ACT domain RY45_RS04600 IPR003607 HD/PDEase domain RY45_RS04600 IPR004095 TGS RY45_RS04600 IPR004811 RelA/SpoT family RY45_RS04600 IPR007685 RelA/SpoT RY45_RS04600 IPR012675 Beta-grasp domain RY45_RS04600 IPR012676 TGS-like RY45_RS04605 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RY45_RS04605 IPR011551 NTP pyrophosphohydrolase MazG, bacterial RY45_RS04610 IPR004468 CTP synthase RY45_RS04610 IPR017456 CTP synthase, N-terminal RY45_RS04610 IPR017926 Glutamine amidotransferase RY45_RS04610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04610 IPR029062 Class I glutamine amidotransferase-like RY45_RS04615 IPR000941 Enolase RY45_RS04615 IPR020809 Enolase, conserved site RY45_RS04615 IPR020810 Enolase, C-terminal RY45_RS04615 IPR020811 Enolase, N-terminal RY45_RS04615 IPR029017 Enolase N-terminal domain-like RY45_RS04615 IPR029065 Enolase C-terminal domain-like RY45_RS04620 IPR007060 Septum formation initiator FtsL/DivIC RY45_RS04620 IPR023081 Cell division protein FtsB RY45_RS04625 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RY45_RS04625 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RY45_RS04625 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS04630 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RY45_RS04630 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RY45_RS04635 IPR001656 Pseudouridine synthase, TruD RY45_RS04635 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS04635 IPR020119 Pseudouridine synthase TruD, conserved site RY45_RS04640 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RY45_RS04640 IPR030048 RY45_RS04640 RY45_RS04645 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RY45_RS04645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS04650 IPR032816 RY45_RS04650 RY45_RS04650 IPR032818 RY45_RS04650 RY45_RS04655 IPR011055 Duplicated hybrid motif RY45_RS04655 IPR016047 Peptidase M23 RY45_RS04655 IPR018392 LysM domain RY45_RS04660 IPR000943 RNA polymerase sigma-70 RY45_RS04660 IPR007624 RNA polymerase sigma-70 region 3 RY45_RS04660 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS04660 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS04660 IPR009042 RNA polymerase sigma-70 region 1.2 RY45_RS04660 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04660 IPR012761 RNA polymerase sigma factor RpoS RY45_RS04660 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS04660 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS04660 IPR014284 RNA polymerase sigma-70 like domain RY45_RS04665 IPR000905 Gcp-like domain RY45_RS04665 IPR017860 Peptidase M22, conserved site RY45_RS04665 IPR017861 Kae1/YgjD family RY45_RS04665 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RY45_RS04670 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RY45_RS04670 IPR019004 Uncharacterised domain YOR215C, mitochondrial RY45_RS04670 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RY45_RS04675 IPR002694 Zinc finger, CHC2-type RY45_RS04675 IPR006171 Toprim domain RY45_RS04675 IPR006295 DNA primase, DnaG RY45_RS04675 IPR013173 DNA primase DnaG, DnaB-binding domain RY45_RS04675 IPR013264 DNA primase, catalytic core, N-terminal RY45_RS04675 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RY45_RS04675 IPR019475 DNA primase, DnaB-helicase binding domain RY45_RS04675 IPR030846 RY45_RS04675 RY45_RS04680 IPR000943 RNA polymerase sigma-70 RY45_RS04680 IPR007127 RNA polymerase sigma factor 70, region 1.1 RY45_RS04680 IPR007624 RNA polymerase sigma-70 region 3 RY45_RS04680 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS04680 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS04680 IPR007631 RNA polymerase sigma factor 70, non-essential domain RY45_RS04680 IPR009042 RNA polymerase sigma-70 region 1.2 RY45_RS04680 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04680 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RY45_RS04680 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS04680 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS04680 IPR014284 RNA polymerase sigma-70 like domain RY45_RS04680 IPR028630 RNA polymerase sigma factor RpoD RY45_RS04695 IPR000601 PKD domain RY45_RS04695 IPR006046 Alpha amylase RY45_RS04695 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS04695 IPR006048 Alpha-amylase, C-terminal all beta RY45_RS04695 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS04695 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS04695 IPR015902 Glycoside hydrolase, family 13 RY45_RS04695 IPR017853 Glycoside hydrolase, superfamily RY45_RS04695 IPR022409 PKD/Chitinase domain RY45_RS04695 IPR031319 RY45_RS04695 RY45_RS04700 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RY45_RS04700 IPR016174 Di-haem cytochrome, transmembrane RY45_RS04705 IPR009155 Cytochrome b562 RY45_RS04705 IPR010980 Cytochrome c/b562 RY45_RS04710 IPR000115 Phosphoribosylglycinamide synthetase RY45_RS04710 IPR011054 Rudiment single hybrid motif RY45_RS04710 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS04710 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS04710 IPR016185 Pre-ATP-grasp domain RY45_RS04710 IPR020559 Phosphoribosylglycinamide synthetase, conserved site RY45_RS04710 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RY45_RS04710 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RY45_RS04710 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RY45_RS04715 IPR002695 AICARFT/IMPCHase bienzyme RY45_RS04715 IPR011607 Methylglyoxal synthase-like domain RY45_RS04715 IPR016193 Cytidine deaminase-like RY45_RS04715 IPR024051 AICAR transformylase domain RY45_RS04720 IPR000551 MerR-type HTH domain RY45_RS04720 IPR009061 DNA binding domain, putative RY45_RS04720 IPR011788 Zn(II)-responsive transcriptional regulator RY45_RS04720 IPR015358 Transcription regulator MerR, DNA binding RY45_RS04725 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RY45_RS04725 IPR024072 Dihydrofolate reductase-like domain RY45_RS04730 IPR005589 Protein of unknown function DUF331 RY45_RS04735 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RY45_RS04735 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS04735 IPR007197 Radical SAM RY45_RS04735 IPR010723 HemN, C-terminal domain RY45_RS04735 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS04740 IPR002637 Ham1-like protein RY45_RS04740 IPR020922 Non-canonical purine NTP pyrophosphatase RY45_RS04740 IPR029001 Inosine triphosphate pyrophosphatase-like RY45_RS04745 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RY45_RS04745 IPR005829 Sugar transporter, conserved site RY45_RS04745 IPR011701 Major facilitator superfamily RY45_RS04745 IPR020846 Major facilitator superfamily domain RY45_RS04750 IPR000683 Oxidoreductase, N-terminal RY45_RS04750 IPR004104 Oxidoreductase, C-terminal RY45_RS04750 IPR016040 NAD(P)-binding domain RY45_RS04760 IPR000182 GNAT domain RY45_RS04760 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04765 IPR000182 GNAT domain RY45_RS04765 IPR016181 Acyl-CoA N-acyltransferase RY45_RS04770 IPR001570 Peptidase M4, C-terminal RY45_RS04770 IPR007280 Peptidase, C-terminal, archaeal/bacterial RY45_RS04770 IPR011096 FTP domain RY45_RS04770 IPR013856 Peptidase M4 domain RY45_RS04770 IPR023612 Peptidase M4 RY45_RS04770 IPR025711 PepSY domain RY45_RS04775 IPR000847 Transcription regulator HTH, LysR RY45_RS04775 IPR005119 LysR, substrate-binding RY45_RS04775 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS04780 IPR011701 Major facilitator superfamily RY45_RS04780 IPR020846 Major facilitator superfamily domain RY45_RS04780 IPR022855 Multidrug resistance protein MdtH RY45_RS04785 IPR001702 Porin, Gram-negative type RY45_RS04785 IPR001897 Porin, gammaproteobacterial RY45_RS04785 IPR023614 Porin domain RY45_RS04790 IPR004668 Anaerobic c4-dicarboxylate membrane transporter RY45_RS04795 IPR000362 Fumarate lyase family RY45_RS04795 IPR004708 Aspartate ammonia-lyase RY45_RS04795 IPR008948 L-Aspartase-like RY45_RS04795 IPR018951 Fumarase C, C-terminal RY45_RS04795 IPR020557 Fumarate lyase, conserved site RY45_RS04795 IPR022761 Fumarate lyase, N-terminal RY45_RS04795 IPR024083 Fumarase/histidase, N-terminal RY45_RS04800 IPR007313 FxsA cytoplasmic membrane protein RY45_RS04805 IPR002528 Multi antimicrobial extrusion protein RY45_RS04810 IPR011032 GroES (chaperonin 10)-like RY45_RS04810 IPR018369 Chaperonin Cpn10, conserved site RY45_RS04810 IPR020818 Chaperonin Cpn10 RY45_RS04815 IPR001844 Chaperonin Cpn60 RY45_RS04815 IPR002423 Chaperonin Cpn60/TCP-1 RY45_RS04815 IPR018370 Chaperonin Cpn60, conserved site RY45_RS04815 IPR027409 GroEL-like apical domain RY45_RS04815 IPR027413 GroEL-like equatorial domain RY45_RS04820 IPR000572 Oxidoreductase, molybdopterin-binding domain RY45_RS04825 IPR000160 GGDEF domain RY45_RS04825 IPR001633 EAL domain RY45_RS04825 IPR029787 Nucleotide cyclase RY45_RS04830 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS04830 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS04835 IPR000330 SNF2-related RY45_RS04835 IPR001650 Helicase, C-terminal RY45_RS04835 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS04835 IPR022737 RNA polymerase recycling, bacterial, C-terminal RY45_RS04835 IPR023949 RNA polymerase-associated protein RapA RY45_RS04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04870 IPR000788 Ribonucleotide reductase large subunit, C-terminal RY45_RS04870 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent RY45_RS04880 IPR002716 PIN domain RY45_RS04880 IPR003714 PhoH-like protein RY45_RS04880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04880 IPR029060 PIN domain-like RY45_RS04885 IPR003439 ABC transporter-like RY45_RS04885 IPR003593 AAA+ ATPase domain RY45_RS04885 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ RY45_RS04885 IPR017871 ABC transporter, conserved site RY45_RS04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04890 IPR000515 MetI-like domain RY45_RS04890 IPR005947 Thiamine ABC transporter, permease protein RY45_RS04895 IPR005948 Thiamine ABC transporter periplasmic binding protein RY45_RS04895 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein RY45_RS04900 IPR009875 PilZ domain RY45_RS04910 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RY45_RS04910 IPR004431 3-isopropylmalate dehydratase, small subunit RY45_RS04910 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RY45_RS04910 IPR015937 Aconitase/isopropylmalate dehydratase RY45_RS04915 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RY45_RS04915 IPR004430 3-isopropylmalate dehydratase, large subunit RY45_RS04915 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RY45_RS04915 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RY45_RS04915 IPR015937 Aconitase/isopropylmalate dehydratase RY45_RS04915 IPR018136 Aconitase family, 4Fe-4S cluster binding site RY45_RS04920 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RY45_RS04920 IPR004429 Isopropylmalate dehydrogenase RY45_RS04920 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RY45_RS04920 IPR024084 Isopropylmalate dehydrogenase-like domain RY45_RS04925 IPR000891 Pyruvate carboxyltransferase RY45_RS04925 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RY45_RS04925 IPR005671 2-isopropylmalate synthase, bacterial-type RY45_RS04925 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RY45_RS04925 IPR013785 Aldolase-type TIM barrel RY45_RS04930 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS04930 IPR009057 Homeodomain-like RY45_RS04930 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS04930 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS04935 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RY45_RS04940 IPR005262 Conserved hypothetical protein CHP00661 RY45_RS04945 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS04945 IPR012000 Thiamine pyrophosphate enzyme, central domain RY45_RS04945 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RY45_RS04945 IPR012846 Acetolactate synthase, large subunit, biosynthetic RY45_RS04945 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS04945 IPR029061 Thiamin diphosphate-binding fold RY45_RS04950 IPR004789 Acetolactate synthase, small subunit RY45_RS04950 IPR019455 Acetolactate synthase, small subunit, C-terminal RY45_RS04955 IPR002505 Phosphate acetyl/butaryl transferase RY45_RS04955 IPR004614 Phosphate acetyltransferase RY45_RS04955 IPR010766 DRTGG RY45_RS04955 IPR016475 Phosphate acetyltransferase, bacteria RY45_RS04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS04955 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like RY45_RS04960 IPR000890 Aliphatic acid kinase, short-chain RY45_RS04960 IPR004372 Acetate/Proprionate kinase RY45_RS04960 IPR023865 Aliphatic acid kinase, short-chain, conserved site RY45_RS04965 IPR007334 Uncharacterised protein family UPF0208 RY45_RS04970 IPR005587 Uncharacterised protein family UPF0304, YfbU RY45_RS04970 IPR023145 YfbU, helix-hairpin domain RY45_RS04970 IPR023146 YfbU, alpha-helical bundle domain RY45_RS04975 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RY45_RS04975 IPR012336 Thioredoxin-like fold RY45_RS04975 IPR024706 Peroxiredoxin, AhpC-type RY45_RS04980 IPR016867 Glycine cleavage repressor GcvR RY45_RS04985 IPR002220 DapA-like RY45_RS04985 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RY45_RS04985 IPR013785 Aldolase-type TIM barrel RY45_RS04985 IPR020624 Dihydrodipicolinate synthetase, conserved site RY45_RS04985 IPR020625 Dihydrodipicolinate synthetase, active site RY45_RS04990 IPR010653 Lipoprotein, NlpB RY45_RS04990 IPR014524 Outer membrane protein assembly factor BamC RY45_RS04995 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS04995 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type RY45_RS04995 IPR028923 SAICAR synthetase/ADE2, N-terminal RY45_RS05000 IPR002347 Glucose/ribitol dehydrogenase RY45_RS05000 IPR016040 NAD(P)-binding domain RY45_RS05005 IPR000847 Transcription regulator HTH, LysR RY45_RS05005 IPR005119 LysR, substrate-binding RY45_RS05005 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05010 IPR018635 Uncharacterised protein family UPF0319 RY45_RS05015 IPR001310 Histidine triad (HIT) protein RY45_RS05015 IPR011146 HIT-like domain RY45_RS05015 IPR026026 Histidine triad hydrolase, Hint-type RY45_RS05020 IPR024513 Protein of unknown function DUF3334 RY45_RS05020 IPR028976 CheC-like domain RY45_RS05025 IPR016896 Protein of unknown function DUF2860 RY45_RS05030 IPR000014 PAS domain RY45_RS05030 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05030 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS05030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS05030 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS05030 IPR011006 CheY-like superfamily RY45_RS05030 IPR013656 PAS fold-4 RY45_RS05030 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB RY45_RS05030 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain RY45_RS05035 IPR003607 HD/PDEase domain RY45_RS05035 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RY45_RS05035 IPR006674 HD domain RY45_RS05035 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain RY45_RS05035 IPR026875 Phosphohydrolase-associated domain RY45_RS05035 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain RY45_RS05045 IPR000014 PAS domain RY45_RS05045 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS05045 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05045 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05045 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS05045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS05045 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS05045 IPR011006 CheY-like superfamily RY45_RS05045 IPR013656 PAS fold-4 RY45_RS05050 IPR001633 EAL domain RY45_RS05050 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05050 IPR011006 CheY-like superfamily RY45_RS05055 IPR003660 HAMP linker domain RY45_RS05055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS05060 IPR006645 NusG, N-terminal RY45_RS05060 IPR010215 Transcription antitermination protein RfaH RY45_RS05065 IPR004872 Lipoprotein NlpA family RY45_RS05070 IPR000515 MetI-like domain RY45_RS05075 IPR003439 ABC transporter-like RY45_RS05075 IPR003593 AAA+ ATPase domain RY45_RS05075 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria RY45_RS05075 IPR017871 ABC transporter, conserved site RY45_RS05075 IPR018449 NIL domain RY45_RS05075 IPR026253 Methionine import ATP-binding protein MetN RY45_RS05075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05085 IPR012347 Ferritin-related RY45_RS05090 IPR000600 ROK RY45_RS05095 IPR004453 Epoxyqueuosine reductase QueG RY45_RS05095 IPR013542 Domain of unknown function DUF1730 RY45_RS05095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS05100 IPR000631 YjeF C-terminal domain RY45_RS05100 IPR004443 YjeF N-terminal domain RY45_RS05100 IPR029056 Ribokinase-like RY45_RS05100 IPR030677 RY45_RS05100 RY45_RS05105 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RY45_RS05105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05110 IPR002508 Cell wall hydrolase/autolysin, catalytic RY45_RS05110 IPR018392 LysM domain RY45_RS05110 IPR021731 AMIN domain RY45_RS05115 IPR002099 DNA mismatch repair protein family RY45_RS05115 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05115 IPR013507 DNA mismatch repair protein, C-terminal RY45_RS05115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS05115 IPR014762 DNA mismatch repair, conserved site RY45_RS05115 IPR014790 MutL, C-terminal, dimerisation RY45_RS05115 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS05115 IPR020667 DNA mismatch repair protein, MutL RY45_RS05120 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RY45_RS05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05125 IPR005001 Host factor Hfq RY45_RS05125 IPR010920 Like-Sm (LSM) domain RY45_RS05130 IPR006073 GTP binding domain RY45_RS05130 IPR009022 Elongation factor G, III-V domain RY45_RS05130 IPR016496 GTPase HflX RY45_RS05130 IPR025121 GTPase HflX N-terminal domain RY45_RS05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05130 IPR032305 RY45_RS05130 RY45_RS05135 IPR001107 Band 7 protein RY45_RS05135 IPR001972 Stomatin family RY45_RS05135 IPR010201 HflK RY45_RS05135 IPR020980 Menbrane protein HflK, N-terminal RY45_RS05140 IPR001107 Band 7 protein RY45_RS05140 IPR001972 Stomatin family RY45_RS05140 IPR010200 HflC RY45_RS05145 IPR019201 Protein of unknown function DUF2065 RY45_RS05150 IPR000092 Polyprenyl synthetase RY45_RS05150 IPR008949 Terpenoid synthase RY45_RS05150 IPR017446 Polyprenyl synthetase-related RY45_RS05160 IPR001684 Ribosomal protein L27 RY45_RS05160 IPR018261 Ribosomal protein L27, conserved site RY45_RS05165 IPR006073 GTP binding domain RY45_RS05165 IPR006074 GTP1/OBG, conserved site RY45_RS05165 IPR006169 GTP1/OBG domain RY45_RS05165 IPR014100 GTP-binding protein Obg/CgtA RY45_RS05165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05170 IPR011642 Nucleoside recognition Gate RY45_RS05175 IPR000873 AMP-dependent synthetase/ligase RY45_RS05175 IPR020845 AMP-binding, conserved site RY45_RS05175 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS05190 IPR003607 HD/PDEase domain RY45_RS05190 IPR003660 HAMP linker domain RY45_RS05190 IPR006674 HD domain RY45_RS05190 IPR029016 GAF domain-like RY45_RS05195 IPR011251 Luciferase-like domain RY45_RS05195 IPR019949 Luciferase family oxidoreductase, group 1 RY45_RS05200 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS05200 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS05200 IPR025698 2TM domain RY45_RS05210 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RY45_RS05210 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS05210 IPR029052 Metallo-dependent phosphatase-like RY45_RS05215 IPR007474 ApaG domain RY45_RS05220 IPR001737 Ribosomal RNA adenine methylase transferase RY45_RS05220 IPR011530 Ribosomal RNA adenine dimethylase RY45_RS05220 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RY45_RS05220 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RY45_RS05220 IPR023165 rRNA adenine dimethylase-like RY45_RS05220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS05225 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RY45_RS05225 IPR024084 Isopropylmalate dehydrogenase-like domain RY45_RS05230 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RY45_RS05230 IPR008880 Trigger factor, C-terminal domain RY45_RS05230 IPR015391 SurA N-terminal RY45_RS05230 IPR023034 Peptidyl-prolyl isomerase SurA RY45_RS05230 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RY45_RS05230 IPR027304 Trigger factor/SurA domain RY45_RS05235 IPR005653 Organic solvent tolerance-like, N-terminal RY45_RS05235 IPR007543 Organic solvent tolerance protein, C-terminal RY45_RS05235 IPR020889 Lipopolysaccharide assembly, LptD RY45_RS05240 IPR002575 Aminoglycoside phosphotransferase RY45_RS05240 IPR011009 Protein kinase-like domain RY45_RS05245 IPR005835 Nucleotidyl transferase RY45_RS05245 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS05250 IPR001623 DnaJ domain RY45_RS05250 IPR007791 Heat shock protein DnaJ-like protein DjlA RY45_RS05250 IPR023749 DnaJ-like protein DjlA RY45_RS05250 IPR029024 TerB-like RY45_RS05255 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS05255 IPR026033 Purine permease PbuG-like RY45_RS05255 IPR029940 RY45_RS05255 RY45_RS05265 IPR003439 ABC transporter-like RY45_RS05265 IPR003593 AAA+ ATPase domain RY45_RS05265 IPR017871 ABC transporter, conserved site RY45_RS05265 IPR022374 ABC transporter, ATP-binding protein, ChvD RY45_RS05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05265 IPR032781 RY45_RS05265 RY45_RS05270 IPR000595 Cyclic nucleotide-binding domain RY45_RS05270 IPR014710 RmlC-like jelly roll fold RY45_RS05270 IPR018490 Cyclic nucleotide-binding-like RY45_RS05275 IPR019629 Uncharacterised protein family HI1736/YgjV RY45_RS05275 IPR026267 Inner membrane protein YgjV RY45_RS05280 IPR000845 Nucleoside phosphorylase domain RY45_RS05280 IPR018017 Nucleoside phosphorylase RY45_RS05285 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS05285 IPR011990 Tetratricopeptide-like helical domain RY45_RS05285 IPR023346 Lysozyme-like domain RY45_RS05290 IPR008160 Collagen triple helix repeat RY45_RS05300 IPR000847 Transcription regulator HTH, LysR RY45_RS05300 IPR005119 LysR, substrate-binding RY45_RS05300 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05305 IPR000845 Nucleoside phosphorylase domain RY45_RS05305 IPR001369 PNP/MTAP phosphorylase RY45_RS05305 IPR010943 Xanthosine phosphorylase RY45_RS05305 IPR011268 Purine nucleoside phosphorylase RY45_RS05305 IPR018099 Purine phosphorylase, family 2, conserved site RY45_RS05310 IPR002668 Concentrative nucleoside transporter N-terminal domain RY45_RS05310 IPR008276 Concentrative nucleoside transporter RY45_RS05310 IPR011642 Nucleoside recognition Gate RY45_RS05310 IPR011657 Concentrative nucleoside transporter C-terminal domain RY45_RS05315 IPR002915 DeoC/FbaB/ lacD aldolase RY45_RS05315 IPR011343 Deoxyribose-phosphate aldolase RY45_RS05315 IPR013785 Aldolase-type TIM barrel RY45_RS05320 IPR000620 Drug/metabolite transporter RY45_RS05325 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS05325 IPR008089 Nucleotide sugar epimerase RY45_RS05325 IPR016040 NAD(P)-binding domain RY45_RS05330 IPR003740 Membrane Protein of unknown function DUF161 RY45_RS05335 IPR003439 ABC transporter-like RY45_RS05335 IPR003593 AAA+ ATPase domain RY45_RS05335 IPR017871 ABC transporter, conserved site RY45_RS05335 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05340 IPR000522 ABC transporter, permease protein RY45_RS05340 IPR029022 ABC transporter, BtuC-like RY45_RS05345 IPR002491 ABC transporter periplasmic binding domain RY45_RS05350 IPR010413 Heme utilization carrier protein HutX like RY45_RS05355 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RY45_RS05355 IPR012349 FMN-binding split barrel RY45_RS05355 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain RY45_RS05365 IPR000868 Isochorismatase-like RY45_RS05370 IPR007314 Domain of unknown function DUF399 RY45_RS05375 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS05375 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RY45_RS05375 IPR011276 TonB-dependent haem/haemoglobin receptor RY45_RS05375 IPR012910 TonB-dependent receptor, plug RY45_RS05380 IPR020846 Major facilitator superfamily domain RY45_RS05380 IPR024989 Major facilitator superfamily associated domain RY45_RS05380 IPR026032 Phenylproprionate/maltose permease RY45_RS05385 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS05385 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS05390 IPR021354 Protein of unknown function DUF2975 RY45_RS05395 IPR000014 PAS domain RY45_RS05395 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05395 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05395 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS05395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS05395 IPR011006 CheY-like superfamily RY45_RS05400 IPR001223 Glycoside hydrolase, family 18, catalytic domain RY45_RS05400 IPR001579 Glycoside hydrolase, chitinase active site RY45_RS05400 IPR003610 Carbohydrate-binding module family 5/12 RY45_RS05400 IPR011583 Chitinase II RY45_RS05400 IPR013540 Chitinase A N-terminal RY45_RS05400 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS05400 IPR013783 Immunoglobulin-like fold RY45_RS05400 IPR014756 Immunoglobulin E-set RY45_RS05400 IPR017853 Glycoside hydrolase, superfamily RY45_RS05400 IPR022409 PKD/Chitinase domain RY45_RS05400 IPR029070 Chitinase insertion domain RY45_RS05405 IPR019503 Peptidase M66 RY45_RS05410 IPR000601 PKD domain RY45_RS05410 IPR000726 Glycoside hydrolase, family 19, catalytic RY45_RS05410 IPR003610 Carbohydrate-binding module family 5/12 RY45_RS05410 IPR022409 PKD/Chitinase domain RY45_RS05410 IPR023346 Lysozyme-like domain RY45_RS05415 IPR013216 Methyltransferase type 11 RY45_RS05415 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted RY45_RS05415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS05420 IPR000595 Cyclic nucleotide-binding domain RY45_RS05420 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05420 IPR012318 Helix-turn-helix motif, Crp-type RY45_RS05420 IPR014710 RmlC-like jelly roll fold RY45_RS05420 IPR018335 Transcription regulator HTH, Crp-type, conserved site RY45_RS05420 IPR018488 Cyclic nucleotide-binding, conserved site RY45_RS05420 IPR018490 Cyclic nucleotide-binding-like RY45_RS05425 IPR003718 OsmC/Ohr family RY45_RS05425 IPR015946 K homology domain-like, alpha/beta RY45_RS05430 IPR018660 C-type lysozyme, inhibitor RY45_RS05435 IPR025411 Domain of unknown function DUF4136 RY45_RS05440 IPR006082 Phosphoribulokinase RY45_RS05440 IPR006083 Phosphoribulokinase/uridine kinase RY45_RS05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05445 IPR000390 Small multidrug resistance protein family RY45_RS05445 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF RY45_RS05450 IPR000620 Drug/metabolite transporter RY45_RS05450 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE RY45_RS05455 IPR003342 Glycosyl transferase, family 39 RY45_RS05455 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase RY45_RS05460 IPR002509 Polysaccharide deacetylase RY45_RS05460 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RY45_RS05460 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable RY45_RS05465 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS05465 IPR002376 Formyl transferase, N-terminal RY45_RS05465 IPR005793 Formyl transferase, C-terminal RY45_RS05465 IPR011034 Formyl transferase, C-terminal-like RY45_RS05465 IPR016040 NAD(P)-binding domain RY45_RS05465 IPR021168 Bifunctional polymyxin resistance protein, ArnA RY45_RS05470 IPR001173 Glycosyltransferase 2-like RY45_RS05470 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase RY45_RS05470 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS05475 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RY45_RS05475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS05475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS05475 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS05475 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB RY45_RS05480 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RY45_RS05480 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS05480 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RY45_RS05480 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RY45_RS05480 IPR016040 NAD(P)-binding domain RY45_RS05480 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RY45_RS05480 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RY45_RS05485 IPR010648 Uncharacterised protein family UPF0270 RY45_RS05490 IPR000160 GGDEF domain RY45_RS05490 IPR029787 Nucleotide cyclase RY45_RS05490 IPR033444 RY45_RS05490 RY45_RS05495 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS05495 IPR012020 AB-hydrolase YheT, putative RY45_RS05495 IPR029058 Alpha/Beta hydrolase fold RY45_RS05500 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05500 IPR002545 CheW-like protein RY45_RS05500 IPR011006 CheY-like superfamily RY45_RS05500 IPR024181 Chemotaxis response regulator CheV RY45_RS05510 IPR012658 Conserved hypothetical protein CHP02443 RY45_RS05515 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS05515 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RY45_RS05520 IPR007236 SlyX RY45_RS05525 IPR001680 WD40 repeat RY45_RS05525 IPR002372 Pyrrolo-quinoline quinone repeat RY45_RS05525 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RY45_RS05525 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS05525 IPR019775 WD40 repeat, conserved site RY45_RS05530 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RY45_RS05530 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS05530 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RY45_RS05535 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05535 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS05535 IPR002197 DNA binding HTH domain, Fis-type RY45_RS05535 IPR003593 AAA+ ATPase domain RY45_RS05535 IPR009057 Homeodomain-like RY45_RS05535 IPR011006 CheY-like superfamily RY45_RS05535 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS05535 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05540 IPR011990 Tetratricopeptide-like helical domain RY45_RS05550 IPR021339 Protein of unknown function DUF2956 RY45_RS05555 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS05555 IPR006179 5'-Nucleotidase/apyrase RY45_RS05555 IPR008334 5'-Nucleotidase, C-terminal RY45_RS05555 IPR029052 Metallo-dependent phosphatase-like RY45_RS05560 IPR001633 EAL domain RY45_RS05560 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RY45_RS05565 IPR007379 Tim44-like domain RY45_RS05565 IPR032710 RY45_RS05565 RY45_RS05570 IPR003593 AAA+ ATPase domain RY45_RS05570 IPR007692 DNA helicase, DnaB type RY45_RS05570 IPR007693 DNA helicase, DnaB-like, N-terminal RY45_RS05570 IPR007694 DNA helicase, DnaB-like, C-terminal RY45_RS05570 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RY45_RS05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS05575 IPR000821 Alanine racemase RY45_RS05575 IPR001608 Alanine racemase, N-terminal RY45_RS05575 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS05575 IPR011079 Alanine racemase, C-terminal RY45_RS05575 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RY45_RS05575 IPR029066 PLP-binding barrel RY45_RS05580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS05580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS05585 IPR001539 Peptidase U32 RY45_RS05585 IPR032525 RY45_RS05585 RY45_RS05590 IPR001633 EAL domain RY45_RS05595 IPR008962 PapD-like RY45_RS05600 IPR007540 Fimbrial major subunit, CS1-type RY45_RS05605 IPR031917 RY45_RS05605 RY45_RS05605 IPR032636 RY45_RS05605 RY45_RS05610 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS05610 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05610 IPR011006 CheY-like superfamily RY45_RS05610 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05610 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS05615 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS05615 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05615 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05615 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS05615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS05615 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS05615 IPR011006 CheY-like superfamily RY45_RS05640 IPR000192 Aminotransferase class V domain RY45_RS05640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS05640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS05640 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS05645 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RY45_RS05645 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05645 IPR008248 Signal transduction response regulator, chemotaxis, CheB RY45_RS05645 IPR011006 CheY-like superfamily RY45_RS05650 IPR005659 Chemoreceptor glutamine deamidase CheD RY45_RS05650 IPR011324 Cytotoxic necrotizing factor-like, catalytic RY45_RS05655 IPR000780 MCP methyltransferase, CheR-type RY45_RS05655 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal RY45_RS05655 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RY45_RS05655 IPR026024 Chemotaxis protein methyltransferase CheR RY45_RS05655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS05660 IPR000014 PAS domain RY45_RS05660 IPR003660 HAMP linker domain RY45_RS05660 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS05665 IPR002545 CheW-like protein RY45_RS05670 IPR003660 HAMP linker domain RY45_RS05670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS05670 IPR024478 4HB MCP domain RY45_RS05675 IPR002545 CheW-like protein RY45_RS05675 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS05675 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS05675 IPR004105 Histidine kinase CheA-like, homodimeric domain RY45_RS05675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS05675 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS05680 IPR002645 STAS domain RY45_RS05680 IPR003658 Anti-sigma factor antagonist RY45_RS05685 IPR001789 Signal transduction response regulator, receiver domain RY45_RS05685 IPR011006 CheY-like superfamily RY45_RS05690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS05695 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RY45_RS05695 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RY45_RS05695 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RY45_RS05695 IPR016039 Thiolase-like RY45_RS05700 IPR000847 Transcription regulator HTH, LysR RY45_RS05700 IPR005119 LysR, substrate-binding RY45_RS05700 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05705 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS05710 IPR001539 Peptidase U32 RY45_RS05710 IPR020988 Peptidase U32, collagenase RY45_RS05715 IPR007374 ASCH domain RY45_RS05715 IPR015947 PUA-like domain RY45_RS05720 IPR010696 Protein of unknown function DUF1272 RY45_RS05725 IPR011051 RmlC-like cupin domain RY45_RS05725 IPR014710 RmlC-like jelly roll fold RY45_RS05730 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RY45_RS05730 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RY45_RS05730 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS05730 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RY45_RS05730 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RY45_RS05735 IPR003265 HhH-GPD domain RY45_RS05735 IPR004026 Ada DNA repair, metal-binding RY45_RS05735 IPR009057 Homeodomain-like RY45_RS05735 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RY45_RS05735 IPR011257 DNA glycosylase RY45_RS05735 IPR018060 DNA binding HTH domain, AraC-type RY45_RS05735 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RY45_RS05740 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS05745 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase RY45_RS05750 IPR002625 Smr protein/MutS2 C-terminal RY45_RS05755 IPR002816 Pheromone shutdown, TraB RY45_RS05760 IPR014347 Tautomerase/MIF superfamily RY45_RS05760 IPR015017 Protein of unknown function DUF1904 RY45_RS05765 IPR002347 Glucose/ribitol dehydrogenase RY45_RS05765 IPR016040 NAD(P)-binding domain RY45_RS05765 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS05770 IPR005318 Outer membrane porin, bacterial RY45_RS05770 IPR023614 Porin domain RY45_RS05775 IPR003660 HAMP linker domain RY45_RS05775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS05780 IPR000620 Drug/metabolite transporter RY45_RS05785 IPR001303 Class II aldolase/adducin N-terminal RY45_RS05790 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS05790 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS05805 IPR018484 Carbohydrate kinase, FGGY, N-terminal RY45_RS05805 IPR018485 Carbohydrate kinase, FGGY, C-terminal RY45_RS05810 IPR009308 Rhamnose isomerase RY45_RS05810 IPR013022 Xylose isomerase-like, TIM barrel domain RY45_RS05815 IPR004673 L-rhamnose-proton symport, RhaT RY45_RS05820 IPR008000 Rhamnose mutarotase RY45_RS05820 IPR011008 Dimeric alpha-beta barrel RY45_RS05820 IPR013448 L-rhamnose 1-epimerase RY45_RS05830 IPR032370 RY45_RS05830 RY45_RS05830 IPR032386 RY45_RS05830 RY45_RS05830 IPR032388 RY45_RS05830 RY45_RS05835 IPR014549 Uncharacterised conserved integral membrane protein RY45_RS05840 IPR007293 Protein of unknown function UCP028687 RY45_RS05840 IPR024952 Lipoprotein LPP20-like RY45_RS05845 IPR001086 Prephenate dehydratase RY45_RS05845 IPR002701 Chorismate mutase RY45_RS05845 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RY45_RS05845 IPR010952 Chorismate mutase, gammaproteobacteria RY45_RS05845 IPR018528 Prephenate dehydratase, conserved site RY45_RS05845 IPR020822 Chorismate mutase, type II RY45_RS05850 IPR006439 HAD hydrolase, subfamily IA RY45_RS05850 IPR023214 HAD-like domain RY45_RS05860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS05865 IPR021501 Protein of unknown function DUF3157 RY45_RS05870 IPR023614 Porin domain RY45_RS05875 IPR007553 Domain of unknown function DUF523 RY45_RS05875 IPR013560 Domain of unknown function DUF1722 RY45_RS05875 IPR017087 Uncharacterised conserved protein UCP037004 RY45_RS05880 IPR000551 MerR-type HTH domain RY45_RS05880 IPR009061 DNA binding domain, putative RY45_RS05885 IPR002081 Cryptochrome/DNA photolyase, class 1 RY45_RS05885 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal RY45_RS05885 IPR006050 DNA photolyase, N-terminal RY45_RS05885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS05885 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal RY45_RS05890 IPR009959 Polyketide cyclase SnoaL-like domain RY45_RS05890 IPR032710 RY45_RS05890 RY45_RS05895 IPR002347 Glucose/ribitol dehydrogenase RY45_RS05895 IPR016040 NAD(P)-binding domain RY45_RS05895 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS05900 IPR002937 Amine oxidase RY45_RS05900 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS05905 IPR010775 Protein of unknown function DUF1365 RY45_RS05910 IPR003333 Mycolic acid cyclopropane synthase RY45_RS05910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS05915 IPR021306 Protein of unknown function DUF2878 RY45_RS05920 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich RY45_RS05925 IPR016087 Chalcone isomerase RY45_RS05930 IPR024409 Protein of unknown function DUF3833 RY45_RS05935 IPR002177 DNA-binding protein Dps RY45_RS05935 IPR008331 Ferritin/DPS protein domain RY45_RS05935 IPR009078 Ferritin-like superfamily RY45_RS05935 IPR012347 Ferritin-related RY45_RS05935 IPR023188 DNA-binding protein Dps, conserved site RY45_RS05940 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase RY45_RS05940 IPR010048 Hydroxylamine reductase RY45_RS05940 IPR011254 Prismane-like RY45_RS05940 IPR016099 Prismane-like, alpha/beta-sandwich RY45_RS05940 IPR016100 Prismane, alpha-bundle RY45_RS05945 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS05945 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS05945 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RY45_RS05945 IPR001834 NADH:cytochrome b5 reductase (CBR) RY45_RS05945 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RY45_RS05945 IPR008333 Oxidoreductase, FAD-binding domain RY45_RS05945 IPR012675 Beta-grasp domain RY45_RS05945 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS05950 IPR016040 NAD(P)-binding domain RY45_RS05955 IPR012336 Thioredoxin-like fold RY45_RS05965 IPR005565 Haemolysin activator HlyB RY45_RS05965 IPR013686 Polypeptide-transport-associated, ShlB-type RY45_RS05965 IPR027282 Two partner secretion pathway transporter RY45_RS05970 IPR008619 Filamentous haemagglutinin repeat RY45_RS05970 IPR008638 Filamentous haemagglutinin, N-terminal RY45_RS05970 IPR011050 Pectin lyase fold/virulence factor RY45_RS05970 IPR012334 Pectin lyase fold RY45_RS05975 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RY45_RS05975 IPR011050 Pectin lyase fold/virulence factor RY45_RS05975 IPR012334 Pectin lyase fold RY45_RS05980 IPR006915 Domain of unknown function DUF637, haemagglutinin putative RY45_RS05980 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RY45_RS05980 IPR025157 Haemagluttinin repeat RY45_RS06005 IPR006914 VENN motif-containing domain RY45_RS06005 IPR025157 Haemagluttinin repeat RY45_RS06015 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS06015 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RY45_RS06015 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06015 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS06020 IPR008514 Type VI secretion system effector, Hcp RY45_RS06025 IPR006531 Gp5 N-terminal RY45_RS06025 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RY45_RS06025 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RY45_RS06030 IPR025391 Domain of unknown function DUF4123 RY45_RS06050 IPR000847 Transcription regulator HTH, LysR RY45_RS06050 IPR005119 LysR, substrate-binding RY45_RS06050 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06055 IPR005128 Alpha-acetolactate decarboxylase RY45_RS06060 IPR000399 TPP-binding enzyme, conserved site RY45_RS06060 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS06060 IPR012000 Thiamine pyrophosphate enzyme, central domain RY45_RS06060 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RY45_RS06060 IPR012782 Acetolactate synthase, catabolic RY45_RS06060 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS06060 IPR029061 Thiamin diphosphate-binding fold RY45_RS06065 IPR002818 ThiJ/PfpI RY45_RS06065 IPR029062 Class I glutamine amidotransferase-like RY45_RS06070 IPR003710 Ketopantoate reductase ApbA/PanE RY45_RS06070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS06070 IPR013328 Dehydrogenase, multihelical RY45_RS06070 IPR013332 Ketopantoate reductase, N-terminal domain RY45_RS06070 IPR013752 Ketopantoate reductase, C-terminal domain RY45_RS06070 IPR016040 NAD(P)-binding domain RY45_RS06075 IPR007551 Protein of unknown function DUF520 RY45_RS06080 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like RY45_RS06085 IPR020846 Major facilitator superfamily domain RY45_RS06085 IPR024371 Acetyl-coenzyme A transporter 1 RY45_RS06095 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RY45_RS06095 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RY45_RS06095 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RY45_RS06095 IPR029000 Cyclophilin-like domain RY45_RS06100 IPR005619 Uncharacterised protein family, YajG RY45_RS06105 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS06105 IPR007848 Methyltransferase small domain RY45_RS06105 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD RY45_RS06105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS06110 IPR002634 BolA protein RY45_RS06115 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A RY45_RS06115 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal RY45_RS06120 IPR004338 NADH-quinone reductase NQR2/RnfD RY45_RS06120 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit RY45_RS06125 IPR007329 FMN-binding RY45_RS06125 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit RY45_RS06130 IPR003667 Electron transport complex, Rnf/Nqr RY45_RS06130 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit RY45_RS06135 IPR003667 Electron transport complex, Rnf/Nqr RY45_RS06135 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit RY45_RS06140 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS06140 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS06140 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RY45_RS06140 IPR008333 Oxidoreductase, FAD-binding domain RY45_RS06140 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit RY45_RS06140 IPR012675 Beta-grasp domain RY45_RS06140 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS06145 IPR003374 ApbE-like domain RY45_RS06145 IPR024932 Flavin transferase ApbE RY45_RS06150 IPR007495 Protein of unknown function DUF539 RY45_RS06160 IPR001126 DNA-repair protein, UmuC-like RY45_RS06160 IPR017961 DNA polymerase, Y-family, little finger domain RY45_RS06160 IPR022880 DNA polymerase IV RY45_RS06160 IPR024728 DNA polymerase type-Y, HhH motif RY45_RS06165 IPR003660 HAMP linker domain RY45_RS06165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS06165 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS06165 IPR033479 RY45_RS06165 RY45_RS06170 IPR000847 Transcription regulator HTH, LysR RY45_RS06170 IPR005119 LysR, substrate-binding RY45_RS06170 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06175 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS06175 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein RY45_RS06175 IPR029058 Alpha/Beta hydrolase fold RY45_RS06180 IPR006696 Protein of unknown function DUF423 RY45_RS06185 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RY45_RS06185 IPR011224 Ribosomal RNA large subunit methyltransferase M RY45_RS06185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS06195 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RY45_RS06195 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RY45_RS06195 IPR024084 Isopropylmalate dehydrogenase-like domain RY45_RS06200 IPR002421 5'-3' exonuclease, N-terminal RY45_RS06200 IPR008918 Helix-hairpin-helix motif, class 2 RY45_RS06200 IPR020045 5'-3' exonuclease, C-terminal domain RY45_RS06200 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RY45_RS06200 IPR022895 Flap endonuclease Xni RY45_RS06200 IPR029060 PIN domain-like RY45_RS06205 IPR021826 Protein of unknown function DUF3412 RY45_RS06205 IPR027820 Domain of unknown function DUF4478 RY45_RS06205 IPR031100 RY45_RS06205 RY45_RS06210 IPR000160 GGDEF domain RY45_RS06210 IPR029787 Nucleotide cyclase RY45_RS06215 IPR011990 Tetratricopeptide-like helical domain RY45_RS06215 IPR019734 Tetratricopeptide repeat RY45_RS06220 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RY45_RS06220 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RY45_RS06220 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RY45_RS06225 IPR009948 Syd RY45_RS06230 IPR016908 Uncharacterised conserved protein UCP029037 RY45_RS06240 IPR021250 Protein of unknown function DUF2789 RY45_RS06245 IPR021732 Protein of unknown function DUF3301 RY45_RS06250 IPR021936 Protein of unknown function DUF3549 RY45_RS06255 IPR007384 Protein of unknown function UCP006257 RY45_RS06255 IPR023376 YqcC-like domain RY45_RS06260 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS06260 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RY45_RS06260 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS06265 IPR001094 Flavodoxin RY45_RS06265 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS06265 IPR029039 Flavoprotein-like RY45_RS06270 IPR003192 Porin, LamB type RY45_RS06270 IPR023738 Maltoporin RY45_RS06275 IPR010794 Maltose operon periplasmic RY45_RS06280 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS06280 IPR003352 Phosphotransferase system, EIIC RY45_RS06280 IPR011299 PTS system glucose-specific IIBC component RY45_RS06280 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS06285 IPR020911 Uncharacterised protein family UPF0325 RY45_RS06290 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS06290 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RY45_RS06290 IPR011004 Trimeric LpxA-like RY45_RS06290 IPR018357 Hexapeptide transferase, conserved site RY45_RS06290 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RY45_RS06295 IPR002934 Nucleotidyl transferase domain RY45_RS06295 IPR003607 HD/PDEase domain RY45_RS06295 IPR006674 HD domain RY45_RS06295 IPR010043 Protein-PII uridylyltransferase RY45_RS06295 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RY45_RS06300 IPR000994 Peptidase M24, structural domain RY45_RS06300 IPR001714 Peptidase M24, methionine aminopeptidase RY45_RS06300 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RY45_RS06305 IPR001865 Ribosomal protein S2 RY45_RS06305 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RY45_RS06305 IPR018130 Ribosomal protein S2, conserved site RY45_RS06305 IPR023591 Ribosomal protein S2, flavodoxin-like domain RY45_RS06310 IPR001816 Translation elongation factor EFTs/EF1B RY45_RS06310 IPR009060 UBA-like RY45_RS06310 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RY45_RS06310 IPR018101 Translation elongation factor Ts, conserved site RY45_RS06315 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS06315 IPR011817 Uridylate kinase RY45_RS06315 IPR015963 Uridylate kinase, bacteria RY45_RS06320 IPR002661 Ribosome recycling factor RY45_RS06320 IPR023584 Ribosome recycling factor domain RY45_RS06325 IPR001441 Decaprenyl diphosphate synthase-like RY45_RS06325 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RY45_RS06330 IPR000374 Phosphatidate cytidylyltransferase RY45_RS06335 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RY45_RS06335 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RY45_RS06335 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RY45_RS06335 IPR016040 NAD(P)-binding domain RY45_RS06335 IPR026877 DXP reductoisomerase C-terminal domain RY45_RS06340 IPR001478 PDZ domain RY45_RS06340 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RY45_RS06340 IPR008915 Peptidase M50 RY45_RS06345 IPR000184 Bacterial surface antigen (D15) RY45_RS06345 IPR010827 Surface antigen variable number RY45_RS06345 IPR023707 Outer membrane protein assembly factor BamA RY45_RS06350 IPR005632 Chaperone protein Skp RY45_RS06350 IPR024930 Skp domain RY45_RS06355 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS06355 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RY45_RS06355 IPR011004 Trimeric LpxA-like RY45_RS06355 IPR018357 Hexapeptide transferase, conserved site RY45_RS06355 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RY45_RS06360 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RY45_RS06360 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RY45_RS06360 IPR029069 HotDog domain RY45_RS06365 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS06365 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RY45_RS06365 IPR011004 Trimeric LpxA-like RY45_RS06365 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RY45_RS06370 IPR003835 Glycosyl transferase, family 19 RY45_RS06375 IPR001352 Ribonuclease HII/HIII RY45_RS06375 IPR012337 Ribonuclease H-like domain RY45_RS06375 IPR022898 Ribonuclease HII RY45_RS06375 IPR024567 Ribonuclease HII/HIII domain RY45_RS06380 IPR003141 Polymerase/histidinol phosphatase, N-terminal RY45_RS06380 IPR004013 PHP, C-terminal RY45_RS06380 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RY45_RS06380 IPR004805 DNA polymerase III, alpha subunit RY45_RS06380 IPR011708 Bacterial DNA polymerase III, alpha subunit RY45_RS06380 IPR012340 Nucleic acid-binding, OB-fold RY45_RS06380 IPR016195 Polymerase/histidinol phosphatase-like RY45_RS06380 IPR029460 DNA polymerase, helix-hairpin-helix motif RY45_RS06385 IPR001095 Acetyl-CoA carboxylase, alpha subunit RY45_RS06385 IPR029045 ClpP/crotonase-like domain RY45_RS06390 IPR001867 Signal transduction response regulator, C-terminal RY45_RS06390 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06390 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS06395 IPR002293 Amino acid/polyamine transporter I RY45_RS06400 IPR000310 Orn/Lys/Arg decarboxylase, major domain RY45_RS06400 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RY45_RS06400 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RY45_RS06400 IPR011193 Ornithine/lysine/arginine decarboxylase RY45_RS06400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS06400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS06400 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS06405 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase RY45_RS06405 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RY45_RS06405 IPR023685 Pyridoxal kinase PdxY RY45_RS06405 IPR029056 Ribokinase-like RY45_RS06410 IPR002528 Multi antimicrobial extrusion protein RY45_RS06415 IPR000847 Transcription regulator HTH, LysR RY45_RS06415 IPR005119 LysR, substrate-binding RY45_RS06415 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06420 IPR004694 Hydroxy amino acid transporter RY45_RS06420 IPR018227 Tryptophan/tyrosine permease RY45_RS06425 IPR001279 Beta-lactamase-like RY45_RS06430 IPR000847 Transcription regulator HTH, LysR RY45_RS06430 IPR005119 LysR, substrate-binding RY45_RS06430 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06435 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS06435 IPR029058 Alpha/Beta hydrolase fold RY45_RS06440 IPR002925 Dienelactone hydrolase RY45_RS06440 IPR020610 Thiolase, active site RY45_RS06440 IPR029058 Alpha/Beta hydrolase fold RY45_RS06445 IPR000847 Transcription regulator HTH, LysR RY45_RS06445 IPR005119 LysR, substrate-binding RY45_RS06445 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06450 IPR002293 Amino acid/polyamine transporter I RY45_RS06455 IPR000182 GNAT domain RY45_RS06455 IPR016181 Acyl-CoA N-acyltransferase RY45_RS06460 IPR003439 ABC transporter-like RY45_RS06460 IPR003593 AAA+ ATPase domain RY45_RS06460 IPR017871 ABC transporter, conserved site RY45_RS06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS06465 IPR031948 RY45_RS06465 RY45_RS06470 IPR000718 Peptidase M13 RY45_RS06470 IPR008753 Peptidase M13, N-terminal domain RY45_RS06470 IPR018497 Peptidase M13, C-terminal domain RY45_RS06470 IPR024079 Metallopeptidase, catalytic domain RY45_RS06475 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RY45_RS06475 IPR012094 Lysidine-tRNA(Ile) synthetase RY45_RS06475 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal RY45_RS06475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS06475 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain RY45_RS06475 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RY45_RS06480 IPR000160 GGDEF domain RY45_RS06480 IPR029787 Nucleotide cyclase RY45_RS06490 IPR002641 Patatin/Phospholipase A2-related RY45_RS06490 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS06495 IPR022742 Putative lysophospholipase RY45_RS06495 IPR029058 Alpha/Beta hydrolase fold RY45_RS06500 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS06500 IPR009057 Homeodomain-like RY45_RS06500 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS06500 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS06505 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS06505 IPR001789 Signal transduction response regulator, receiver domain RY45_RS06505 IPR011006 CheY-like superfamily RY45_RS06505 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06505 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS06510 IPR004045 Glutathione S-transferase, N-terminal RY45_RS06510 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS06510 IPR012336 Thioredoxin-like fold RY45_RS06515 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS06515 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS06515 IPR014635 Alpha-amylase, MalS type RY45_RS06515 IPR015902 Glycoside hydrolase, family 13 RY45_RS06515 IPR017853 Glycoside hydrolase, superfamily RY45_RS06525 IPR007267 GtrA-like protein RY45_RS06530 IPR001173 Glycosyltransferase 2-like RY45_RS06530 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS06540 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS06545 IPR002477 Peptidoglycan binding-like RY45_RS06545 IPR005490 L,D-transpeptidase catalytic domain RY45_RS06550 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RY45_RS06550 IPR010275 Protein of unknown function DUF882 RY45_RS06560 IPR005115 Uncharacterised domain UPF0126 RY45_RS06565 IPR022985 CysZ, gammaproteobacteria RY45_RS06575 IPR007449 ZipA, C-terminal FtsZ-binding domain RY45_RS06575 IPR011919 Cell division protein ZipA RY45_RS06580 IPR001357 BRCT domain RY45_RS06580 IPR001679 NAD-dependent DNA ligase RY45_RS06580 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RY45_RS06580 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RY45_RS06580 IPR004150 NAD-dependent DNA ligase, OB-fold RY45_RS06580 IPR010994 RuvA domain 2-like RY45_RS06580 IPR012340 Nucleic acid-binding, OB-fold RY45_RS06580 IPR013839 NAD-dependent DNA ligase, adenylation RY45_RS06580 IPR013840 NAD-dependent DNA ligase, N-terminal RY45_RS06580 IPR018239 NAD-dependent DNA ligase, active site RY45_RS06580 IPR033136 RY45_RS06580 RY45_RS06585 IPR007487 ABC transporter, substrate-binding protein RY45_RS06590 IPR005144 ATP-cone RY45_RS06590 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic RY45_RS06590 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RY45_RS06595 IPR001989 Radical-activating enzyme, conserved site RY45_RS06595 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic RY45_RS06595 IPR013785 Aldolase-type TIM barrel RY45_RS06605 IPR006260 TonB, C-terminal RY45_RS06610 IPR018660 C-type lysozyme, inhibitor RY45_RS06615 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS06620 IPR016926 Uncharacterised conserved protein UCP029594 RY45_RS06620 IPR022604 Protein of unknown function DUF2955 RY45_RS06630 IPR000835 MarR-type HTH domain RY45_RS06630 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06630 IPR023187 Transcriptional regulator MarR-type, conserved site RY45_RS06635 IPR004679 2-hydroxycarboxylate transporter RY45_RS06640 IPR001891 Malic oxidoreductase RY45_RS06640 IPR012301 Malic enzyme, N-terminal domain RY45_RS06640 IPR012302 Malic enzyme, NAD-binding RY45_RS06640 IPR016040 NAD(P)-binding domain RY45_RS06645 IPR000014 PAS domain RY45_RS06645 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS06645 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS06645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS06645 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB RY45_RS06645 IPR029151 Periplasmic sensor domain-like RY45_RS06645 IPR033463 RY45_RS06645 RY45_RS06650 IPR001789 Signal transduction response regulator, receiver domain RY45_RS06650 IPR011006 CheY-like superfamily RY45_RS06650 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06650 IPR024187 Signal transduction response regulator, citrate/malate metabolism RY45_RS06650 IPR028141 Transcriptional regulator RY45_RS06655 IPR000620 Drug/metabolite transporter RY45_RS06660 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS06660 IPR009057 Homeodomain-like RY45_RS06660 IPR011051 RmlC-like cupin domain RY45_RS06660 IPR014710 RmlC-like jelly roll fold RY45_RS06660 IPR018060 DNA binding HTH domain, AraC-type RY45_RS06660 IPR018062 HTH domain AraC-type, conserved site RY45_RS06660 IPR020449 Transcription regulator HTH, AraC- type RY45_RS06665 IPR015590 Aldehyde dehydrogenase domain RY45_RS06665 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS06665 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS06665 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS06665 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS06665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS06670 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS06670 IPR002197 DNA binding HTH domain, Fis-type RY45_RS06670 IPR003018 GAF domain RY45_RS06670 IPR003593 AAA+ ATPase domain RY45_RS06670 IPR009057 Homeodomain-like RY45_RS06670 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS06670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS06675 IPR006089 Acyl-CoA dehydrogenase, conserved site RY45_RS06675 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RY45_RS06675 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RY45_RS06675 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RY45_RS06675 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RY45_RS06680 IPR003673 CoA-transferase family III RY45_RS06680 IPR023606 CoA-transferase family III domain RY45_RS06685 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS06685 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS06690 IPR001789 Signal transduction response regulator, receiver domain RY45_RS06690 IPR001867 Signal transduction response regulator, C-terminal RY45_RS06690 IPR011006 CheY-like superfamily RY45_RS06690 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RY45_RS06690 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS06690 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS06695 IPR000014 PAS domain RY45_RS06695 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS06695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS06695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS06695 IPR013767 PAS fold RY45_RS06695 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RY45_RS06695 IPR021766 Protein of unknown function DUF3329 RY45_RS06700 IPR011862 Phosphate binding protein RY45_RS06700 IPR024370 PBP domain RY45_RS06705 IPR001915 Peptidase M48 RY45_RS06710 IPR000182 GNAT domain RY45_RS06710 IPR016181 Acyl-CoA N-acyltransferase RY45_RS06715 IPR000600 ROK RY45_RS06720 IPR005627 Copper homeostasis protein CutC RY45_RS06720 IPR023648 Copper homeostasis CutC domain RY45_RS06730 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RY45_RS06730 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS06730 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RY45_RS06735 IPR003439 ABC transporter-like RY45_RS06735 IPR003593 AAA+ ATPase domain RY45_RS06735 IPR017871 ABC transporter, conserved site RY45_RS06735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS06740 IPR013525 ABC-2 type transporter RY45_RS06745 IPR021268 Protein of unknown function DUF2845 RY45_RS06750 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS06750 IPR018313 Extracellular solute-binding protein, family 3, conserved site RY45_RS06755 IPR000515 MetI-like domain RY45_RS06755 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS06760 IPR000515 MetI-like domain RY45_RS06765 IPR003439 ABC transporter-like RY45_RS06765 IPR003593 AAA+ ATPase domain RY45_RS06765 IPR017871 ABC transporter, conserved site RY45_RS06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS06765 IPR030679 RY45_RS06765 RY45_RS06770 IPR009491 Protein of unknown function DUF1107 RY45_RS06775 IPR000086 NUDIX hydrolase domain RY45_RS06775 IPR015797 NUDIX hydrolase domain-like RY45_RS06775 IPR024195 NUDIX hydrolase, YfcD, predicted RY45_RS06785 IPR012336 Thioredoxin-like fold RY45_RS06785 IPR013740 Redoxin RY45_RS06790 IPR004481 Sodium/potassium/calcium exchanger RY45_RS06790 IPR004837 Sodium/calcium exchanger membrane region RY45_RS06795 IPR000183 Ornithine/DAP/Arg decarboxylase RY45_RS06795 IPR002433 Ornithine decarboxylase RY45_RS06795 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS06795 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RY45_RS06795 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RY45_RS06795 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RY45_RS06795 IPR029066 PLP-binding barrel RY45_RS06800 IPR001463 Sodium:alanine symporter RY45_RS06805 IPR005565 Haemolysin activator HlyB RY45_RS06805 IPR013686 Polypeptide-transport-associated, ShlB-type RY45_RS06805 IPR027282 Two partner secretion pathway transporter RY45_RS06810 IPR008619 Filamentous haemagglutinin repeat RY45_RS06810 IPR008638 Filamentous haemagglutinin, N-terminal RY45_RS06810 IPR011050 Pectin lyase fold/virulence factor RY45_RS06810 IPR012334 Pectin lyase fold RY45_RS06815 IPR006915 Domain of unknown function DUF637, haemagglutinin putative RY45_RS06815 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RY45_RS06815 IPR011050 Pectin lyase fold/virulence factor RY45_RS06815 IPR025157 Haemagluttinin repeat RY45_RS06830 IPR006042 Xanthine/uracil permease RY45_RS06830 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS06830 IPR017588 Xanthine permease RY45_RS06835 IPR000160 GGDEF domain RY45_RS06835 IPR029787 Nucleotide cyclase RY45_RS06840 IPR019633 Protein of unknown function DUF2498 RY45_RS06845 IPR002528 Multi antimicrobial extrusion protein RY45_RS06850 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS06850 IPR009057 Homeodomain-like RY45_RS06850 IPR018060 DNA binding HTH domain, AraC-type RY45_RS06855 IPR001891 Malic oxidoreductase RY45_RS06855 IPR012301 Malic enzyme, N-terminal domain RY45_RS06855 IPR012302 Malic enzyme, NAD-binding RY45_RS06855 IPR015884 Malic enzyme, conserved site RY45_RS06855 IPR016040 NAD(P)-binding domain RY45_RS06855 IPR023667 NAD-dependent malic enzyme, proteobacteria RY45_RS06860 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain RY45_RS06860 IPR002368 Outer membrane protein, OmpA RY45_RS06860 IPR006664 Outer membrane protein, bacterial RY45_RS06860 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS06860 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS06865 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain RY45_RS06865 IPR006664 Outer membrane protein, bacterial RY45_RS06865 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS06865 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS06865 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS06870 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain RY45_RS06870 IPR006664 Outer membrane protein, bacterial RY45_RS06870 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS06870 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS06870 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS06880 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS06880 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS06885 IPR000175 Sodium:neurotransmitter symporter RY45_RS06890 IPR002641 Patatin/Phospholipase A2-related RY45_RS06890 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS06895 IPR000160 GGDEF domain RY45_RS06895 IPR029151 Periplasmic sensor domain-like RY45_RS06895 IPR029787 Nucleotide cyclase RY45_RS06895 IPR033479 RY45_RS06895 RY45_RS06900 IPR006143 RND efflux pump, membrane fusion protein RY45_RS06900 IPR032317 RY45_RS06900 RY45_RS06905 IPR001036 Acriflavin resistance protein RY45_RS06905 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS06915 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS06915 IPR007197 Radical SAM RY45_RS06915 IPR013704 Uncharacterised protein family UPF0313, N-terminal RY45_RS06915 IPR020612 Methylthiotransferase, conserved site RY45_RS06915 IPR022946 Uncharacterised protein family UPF0313 RY45_RS06915 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS06915 IPR024560 Uncharacterised protein family UPF0313, C-terminal RY45_RS06930 IPR007837 DNA damage-inducible protein DinB RY45_RS06930 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RY45_RS06935 IPR000683 Oxidoreductase, N-terminal RY45_RS06935 IPR016040 NAD(P)-binding domain RY45_RS06945 IPR002176 Crossover junction endodeoxyribonuclease RuvC RY45_RS06945 IPR012337 Ribonuclease H-like domain RY45_RS06945 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RY45_RS06950 IPR000425 Major intrinsic protein RY45_RS06950 IPR022357 Major intrinsic protein, conserved site RY45_RS06950 IPR023271 Aquaporin-like RY45_RS06950 IPR023743 Aquaporin Z RY45_RS06955 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS06955 IPR023346 Lysozyme-like domain RY45_RS06960 IPR006046 Alpha amylase RY45_RS06960 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS06960 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS06960 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS06960 IPR015902 Glycoside hydrolase, family 13 RY45_RS06960 IPR017853 Glycoside hydrolase, superfamily RY45_RS06965 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase RY45_RS06965 IPR011055 Duplicated hybrid motif RY45_RS06965 IPR016047 Peptidase M23 RY45_RS06970 IPR000182 GNAT domain RY45_RS06970 IPR016181 Acyl-CoA N-acyltransferase RY45_RS06975 IPR010835 Protein of unknown function DUF1439 RY45_RS06980 IPR001736 Phospholipase D/Transphosphatidylase RY45_RS06980 IPR022924 Cardiolipin synthase RY45_RS06980 IPR025202 Phospholipase D-like domain RY45_RS06980 IPR030840 RY45_RS06980 RY45_RS06985 IPR010352 Protein of unknown function DUF945 RY45_RS06990 IPR002376 Formyl transferase, N-terminal RY45_RS06990 IPR002912 ACT domain RY45_RS06990 IPR004810 Formyltetrahydrofolate deformylase RY45_RS06995 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RY45_RS06995 IPR017945 DHBP synthase RibB-like alpha/beta domain RY45_RS07000 IPR006817 Lipoprotein leucine-zipper RY45_RS07000 IPR016367 Murein-lipoprotein RY45_RS07005 IPR005746 Thioredoxin RY45_RS07005 IPR011990 Tetratricopeptide-like helical domain RY45_RS07005 IPR012336 Thioredoxin-like fold RY45_RS07005 IPR013766 Thioredoxin domain RY45_RS07010 IPR008278 4'-phosphopantetheinyl transferase superfamily RY45_RS07015 IPR000064 Endopeptidase, NLPC/P60 domain RY45_RS07020 IPR010286 Ribosomal RNA large subunit methyltransferase F-like RY45_RS07020 IPR016909 Ribosomal RNA large subunit methyltransferase F RY45_RS07020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS07025 IPR002539 MaoC-like domain RY45_RS07025 IPR029069 HotDog domain RY45_RS07030 IPR007433 Protein of unknown function DUF481 RY45_RS07035 IPR005490 L,D-transpeptidase catalytic domain RY45_RS07045 IPR000847 Transcription regulator HTH, LysR RY45_RS07045 IPR005119 LysR, substrate-binding RY45_RS07045 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS07050 IPR003786 Protein FdhD RY45_RS07050 IPR016193 Cytidine deaminase-like RY45_RS07055 IPR006656 Molybdopterin oxidoreductase RY45_RS07055 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS07055 IPR009010 Aspartate decarboxylase-like domain RY45_RS07055 IPR010046 Oxidoreductase alpha (molybdopterin) subunit RY45_RS07085 IPR009216 Virulence factor SrfB RY45_RS07090 IPR017030 Virulence effector, SrfC RY45_RS07100 IPR002035 von Willebrand factor, type A RY45_RS07105 IPR003439 ABC transporter-like RY45_RS07105 IPR003593 AAA+ ATPase domain RY45_RS07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07110 IPR003838 Permease FtsX-like RY45_RS07110 IPR025857 MacB-like periplasmic core domain RY45_RS07115 IPR005532 Formylglycine-generating sulphatase enzyme domain RY45_RS07115 IPR016187 C-type lectin fold RY45_RS07125 IPR001584 Integrase, catalytic core RY45_RS07125 IPR012337 Ribonuclease H-like domain RY45_RS07125 IPR025948 HTH-like domain RY45_RS07135 IPR003141 Polymerase/histidinol phosphatase, N-terminal RY45_RS07135 IPR016195 Polymerase/histidinol phosphatase-like RY45_RS07135 IPR023710 Probable phosphatase YcdX RY45_RS07140 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS07140 IPR009057 Homeodomain-like RY45_RS07140 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS07140 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS07140 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS07145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RY45_RS07145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RY45_RS07145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RY45_RS07145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RY45_RS07145 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RY45_RS07150 IPR001036 Acriflavin resistance protein RY45_RS07150 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS07155 IPR006143 RND efflux pump, membrane fusion protein RY45_RS07155 IPR032317 RY45_RS07155 RY45_RS07160 IPR001697 Pyruvate kinase RY45_RS07160 IPR011037 Pyruvate kinase-like, insert domain RY45_RS07160 IPR015793 Pyruvate kinase, barrel RY45_RS07160 IPR015794 Pyruvate kinase, alpha/beta RY45_RS07160 IPR015795 Pyruvate kinase, C-terminal RY45_RS07160 IPR015806 Pyruvate kinase, beta-barrel insert domain RY45_RS07160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS07160 IPR018209 Pyruvate kinase, active site RY45_RS07165 IPR000281 Helix-turn-helix protein RpiR RY45_RS07165 IPR001347 Sugar isomerase (SIS) RY45_RS07165 IPR009057 Homeodomain-like RY45_RS07165 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS07170 IPR003836 Glucokinase RY45_RS07175 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS07175 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS07180 IPR001789 Signal transduction response regulator, receiver domain RY45_RS07180 IPR001867 Signal transduction response regulator, C-terminal RY45_RS07180 IPR011006 CheY-like superfamily RY45_RS07180 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS07185 IPR002792 TRAM domain RY45_RS07185 IPR005839 Methylthiotransferase RY45_RS07185 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RY45_RS07185 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS07185 IPR007197 Radical SAM RY45_RS07185 IPR012340 Nucleic acid-binding, OB-fold RY45_RS07185 IPR013848 Methylthiotransferase, N-terminal RY45_RS07185 IPR020612 Methylthiotransferase, conserved site RY45_RS07185 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS07185 IPR023970 Methylthiotransferase/radical SAM-type protein RY45_RS07190 IPR003607 HD/PDEase domain RY45_RS07190 IPR006674 HD domain RY45_RS07190 IPR029016 GAF domain-like RY45_RS07200 IPR001624 Flagellar hook-basal body complex protein FliE RY45_RS07205 IPR000067 Flagellar M-ring protein FliF RY45_RS07205 IPR006182 Secretory protein YscJ/FliF RY45_RS07205 IPR013556 Flagellar M-ring C-terminal RY45_RS07210 IPR000090 Flagellar motor switch protein FliG RY45_RS07210 IPR011002 Flagellar motor switch protein FliG, alpha-helical RY45_RS07210 IPR023087 RY45_RS07210 RY45_RS07210 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RY45_RS07210 IPR032779 RY45_RS07210 RY45_RS07215 IPR000563 Flagellar assembly protein FliH RY45_RS07215 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RY45_RS07220 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS07220 IPR003593 AAA+ ATPase domain RY45_RS07220 IPR005714 ATPase, type III secretion system, FliI/YscN RY45_RS07220 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RY45_RS07220 IPR020005 Flagellar export ATPase FliI, clade 1 RY45_RS07220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07220 IPR032463 RY45_RS07220 RY45_RS07225 IPR012823 Flagellar export FliJ RY45_RS07230 IPR001635 Flagellar hook-length control protein FliK RY45_RS07230 IPR021136 Flagellar hook-length control protein-like, C-terminal RY45_RS07235 IPR005503 Flagellar basal body-associated protein FliL RY45_RS07240 IPR001543 Surface presentation of antigen (SpoA) RY45_RS07240 IPR001689 Flagellar motor switch protein FliM RY45_RS07240 IPR028976 CheC-like domain RY45_RS07245 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RY45_RS07245 IPR001543 Surface presentation of antigen (SpoA) RY45_RS07245 IPR012826 Flagellar motor switch FliN RY45_RS07250 IPR022781 Flagellar biosynthesis protein, FliO RY45_RS07255 IPR005837 Flagellar transport protein FliP RY45_RS07255 IPR005838 Type III secretion system inner membrane P protein RY45_RS07260 IPR002191 Bacterial export protein family 3 RY45_RS07260 IPR006305 Flagellar biosynthesis protein FliQ RY45_RS07265 IPR002010 Type III secretion system inner membrane R protein RY45_RS07265 IPR006303 Flagellar biosynthesis protein FliR RY45_RS07270 IPR006135 Type III secretion system substrate exporter RY45_RS07270 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB RY45_RS07270 IPR029025 Type III secretion system substrate exporter, C-terminal RY45_RS07275 IPR001712 Type III secretion system FHIPEP RY45_RS07275 IPR006301 Flagellar biosynthesis protein FlhA RY45_RS07275 IPR025505 FHIPEP conserved site RY45_RS07280 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RY45_RS07280 IPR003593 AAA+ ATPase domain RY45_RS07280 IPR020006 Signal-recognition particle (SRP)-type GTPase RY45_RS07280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07285 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RY45_RS07285 IPR025501 ATP binding protein MinD RY45_RS07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07290 IPR000943 RNA polymerase sigma-70 RY45_RS07290 IPR007624 RNA polymerase sigma-70 region 3 RY45_RS07290 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS07290 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS07290 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS07290 IPR012845 RNA polymerase sigma factor, FliA/WhiG RY45_RS07290 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS07290 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS07290 IPR014284 RNA polymerase sigma-70 like domain RY45_RS07290 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RY45_RS07290 IPR028617 RNA polymerase sigma factor FliA RY45_RS07295 IPR001789 Signal transduction response regulator, receiver domain RY45_RS07295 IPR011006 CheY-like superfamily RY45_RS07300 IPR007439 Chemotaxis phosphatase, CheZ RY45_RS07305 IPR002545 CheW-like protein RY45_RS07305 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS07305 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS07305 IPR004105 Histidine kinase CheA-like, homodimeric domain RY45_RS07305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS07305 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS07310 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RY45_RS07310 IPR001789 Signal transduction response regulator, receiver domain RY45_RS07310 IPR008248 Signal transduction response regulator, chemotaxis, CheB RY45_RS07310 IPR011006 CheY-like superfamily RY45_RS07315 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS07315 IPR022522 Flagellar motor stator, MotA RY45_RS07320 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS07320 IPR025713 Motility protein B, N-terminal domain RY45_RS07325 IPR025669 AAA domain RY45_RS07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07330 IPR002545 CheW-like protein RY45_RS07330 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like RY45_RS07335 IPR002545 CheW-like protein RY45_RS07340 IPR021244 Protein of unknown function DUF2802 RY45_RS07345 IPR003439 ABC transporter-like RY45_RS07345 IPR003593 AAA+ ATPase domain RY45_RS07345 IPR005895 ABC transporter, haem export, CcmA RY45_RS07345 IPR017871 ABC transporter, conserved site RY45_RS07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07350 IPR003544 Cytochrome c-type biogenesis protein CcmB RY45_RS07350 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RY45_RS07355 IPR002541 Cytochrome c assembly protein RY45_RS07355 IPR003557 Cytochrome c-type biogenesis protein CcmC RY45_RS07360 IPR007078 Haem exporter protein D (CcmD) RY45_RS07365 IPR004329 CcmE/CycJ protein RY45_RS07365 IPR012340 Nucleic acid-binding, OB-fold RY45_RS07370 IPR002541 Cytochrome c assembly protein RY45_RS07370 IPR003567 Cytochrome c-type biogenesis protein RY45_RS07370 IPR003568 Cytochrome c-type biogenesis protein CcmF RY45_RS07370 IPR032523 RY45_RS07370 RY45_RS07375 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE RY45_RS07375 IPR012336 Thioredoxin-like fold RY45_RS07375 IPR013740 Redoxin RY45_RS07375 IPR017937 Thioredoxin, conserved site RY45_RS07380 IPR005616 Cytochrome C biogenesis protein CcmH RY45_RS07385 IPR011990 Tetratricopeptide-like helical domain RY45_RS07385 IPR017560 Cytochrome c-type biogenesis protein CcmI RY45_RS07390 IPR007428 VacJ-like lipoprotein RY45_RS07395 IPR001189 Manganese/iron superoxide dismutase RY45_RS07395 IPR019831 Manganese/iron superoxide dismutase, N-terminal RY45_RS07395 IPR019832 Manganese/iron superoxide dismutase, C-terminal RY45_RS07395 IPR019833 Manganese/iron superoxide dismutase, binding site RY45_RS07400 IPR002109 Glutaredoxin RY45_RS07400 IPR004480 Monothiol glutaredoxin-related RY45_RS07400 IPR012336 Thioredoxin-like fold RY45_RS07400 IPR014434 Monothiol glutaredoxin RY45_RS07405 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RY45_RS07405 IPR023267 RNA (C5-cytosine) methyltransferase RY45_RS07405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS07410 IPR024079 Metallopeptidase, catalytic domain RY45_RS07420 IPR000659 Pyridoxamine 5'-phosphate oxidase RY45_RS07420 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RY45_RS07420 IPR012349 FMN-binding split barrel RY45_RS07420 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RY45_RS07420 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RY45_RS07425 IPR004045 Glutathione S-transferase, N-terminal RY45_RS07425 IPR004046 Glutathione S-transferase, C-terminal RY45_RS07425 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS07425 IPR012336 Thioredoxin-like fold RY45_RS07430 IPR000182 GNAT domain RY45_RS07430 IPR016181 Acyl-CoA N-acyltransferase RY45_RS07435 IPR016181 Acyl-CoA N-acyltransferase RY45_RS07450 IPR003347 JmjC domain RY45_RS07455 IPR000362 Fumarate lyase family RY45_RS07455 IPR004769 Adenylosuccinate lyase RY45_RS07455 IPR008948 L-Aspartase-like RY45_RS07455 IPR013539 Adenylosuccinate lyase PurB, C-terminal RY45_RS07455 IPR020557 Fumarate lyase, conserved site RY45_RS07455 IPR022761 Fumarate lyase, N-terminal RY45_RS07455 IPR024083 Fumarase/histidase, N-terminal RY45_RS07460 IPR007451 Uncharacterised protein family UPF0274 RY45_RS07465 IPR004506 tRNA-specific 2-thiouridylase RY45_RS07465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS07465 IPR023382 Adenine nucleotide alpha hydrolase-like domains RY45_RS07470 IPR000086 NUDIX hydrolase domain RY45_RS07470 IPR015797 NUDIX hydrolase domain-like RY45_RS07470 IPR020084 NUDIX hydrolase, conserved site RY45_RS07470 IPR020476 NUDIX hydrolase RY45_RS07475 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RY45_RS07475 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS07475 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RY45_RS07475 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS07480 IPR000032 Phosphocarrier HPr protein-like RY45_RS07480 IPR002178 PTS EIIA type-2 domain RY45_RS07480 IPR016152 Phosphotransferase/anion transporter RY45_RS07480 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 RY45_RS07485 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RY45_RS07485 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS07490 IPR000849 Sugar phosphate transporter RY45_RS07490 IPR011701 Major facilitator superfamily RY45_RS07490 IPR020846 Major facilitator superfamily domain RY45_RS07495 IPR010261 Tir chaperone protein (CesT) family RY45_RS07500 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal RY45_RS07505 IPR002178 PTS EIIA type-2 domain RY45_RS07505 IPR003352 Phosphotransferase system, EIIC RY45_RS07505 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RY45_RS07505 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS07505 IPR004715 Phosphotransferase system, IIA component fructose subfamily RY45_RS07505 IPR006327 Phosphotransferase system, fructose IIC component RY45_RS07505 IPR016152 Phosphotransferase/anion transporter RY45_RS07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07520 IPR001347 Sugar isomerase (SIS) RY45_RS07530 IPR000551 MerR-type HTH domain RY45_RS07530 IPR009061 DNA binding domain, putative RY45_RS07535 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RY45_RS07535 IPR013785 Aldolase-type TIM barrel RY45_RS07540 IPR000843 Transcription regulator HTH, LacI RY45_RS07540 IPR001761 Periplasmic binding protein/LacI sugar binding domain RY45_RS07540 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS07540 IPR028082 Periplasmic binding protein-like I RY45_RS07545 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS07545 IPR003352 Phosphotransferase system, EIIC RY45_RS07545 IPR011301 PTS system, maltose/glucose-specific IIBC component RY45_RS07545 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS07550 IPR004839 Aminotransferase, class I/classII RY45_RS07550 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS07550 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS07550 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS07550 IPR027619 Putative C-S lyase RY45_RS07565 IPR002178 PTS EIIA type-2 domain RY45_RS07565 IPR003352 Phosphotransferase system, EIIC RY45_RS07565 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RY45_RS07565 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS07565 IPR004715 Phosphotransferase system, IIA component fructose subfamily RY45_RS07565 IPR006327 Phosphotransferase system, fructose IIC component RY45_RS07565 IPR016152 Phosphotransferase/anion transporter RY45_RS07575 IPR001250 Mannose-6-phosphate isomerase, type I RY45_RS07575 IPR011051 RmlC-like cupin domain RY45_RS07575 IPR014710 RmlC-like jelly roll fold RY45_RS07575 IPR016305 Mannose-6-phosphate isomerase RY45_RS07575 IPR018050 Phosphomannose isomerase, type I, conserved site RY45_RS07580 IPR009057 Homeodomain-like RY45_RS07580 IPR018060 DNA binding HTH domain, AraC-type RY45_RS07580 IPR018062 HTH domain AraC-type, conserved site RY45_RS07580 IPR020449 Transcription regulator HTH, AraC- type RY45_RS07585 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RY45_RS07585 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RY45_RS07585 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RY45_RS07585 IPR024084 Isopropylmalate dehydrogenase-like domain RY45_RS07590 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RY45_RS07590 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS07590 IPR011780 D-serine ammonia-lyase RY45_RS07595 IPR003474 Gluconate transporter RY45_RS07600 IPR000847 Transcription regulator HTH, LysR RY45_RS07600 IPR005119 LysR, substrate-binding RY45_RS07600 IPR011781 D-serine deaminase transcriptional activator RY45_RS07600 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS07610 IPR007416 Protein of unknown function DUF469 RY45_RS07620 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS07620 IPR003356 DNA methylase, adenine-specific RY45_RS07620 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RY45_RS07620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS07625 IPR001650 Helicase, C-terminal RY45_RS07625 IPR006935 Helicase/UvrB domain RY45_RS07625 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal RY45_RS07625 IPR013670 EcoEI R protein C-terminal domain RY45_RS07625 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS07625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07630 IPR007560 Restriction endonuclease type IV, Mrr RY45_RS07630 IPR011335 Restriction endonuclease type II-like RY45_RS07630 IPR011856 tRNA endonuclease-like domain RY45_RS07630 IPR025745 Restriction system protein Mrr-like N-terminal domain RY45_RS07635 IPR002104 Integrase, catalytic RY45_RS07635 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS07635 IPR013762 Integrase-like, catalytic core RY45_RS07635 IPR022000 Domain of unknown function (DUF3596) RY45_RS07635 IPR023109 Integrase/recombinase, N-terminal RY45_RS07660 IPR025518 Protein of unknown function DUF4406 RY45_RS07660 IPR027269 Hypothetical PA1492 domain RY45_RS07680 IPR015947 PUA-like domain RY45_RS07695 IPR007476 Putative exonuclease, RdgC RY45_RS07700 IPR008593 DNA N-6-adenine-methyltransferase RY45_RS07725 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain RY45_RS07760 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS07760 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS07760 IPR015927 Peptidase S24/S26A/S26B/S26C RY45_RS07760 IPR028360 Peptidase S24/S26, beta-ribbon domain RY45_RS07765 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS07780 IPR006497 Bacteriophage lambda, GpO, N-terminal RY45_RS07785 IPR007693 DNA helicase, DnaB-like, N-terminal RY45_RS07785 IPR007694 DNA helicase, DnaB-like, C-terminal RY45_RS07785 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RY45_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS07800 IPR008711 Recombinase NinB RY45_RS07810 IPR031875 RY45_RS07810 RY45_RS07835 IPR009052 DNA polymerase III-theta, bacterial RY45_RS07835 IPR011325 DNA polymerase III-theta, core, bacterial RY45_RS07835 IPR021700 Protein of unknown function DUF3283 RY45_RS07840 IPR011989 Armadillo-like helical RY45_RS07840 IPR016024 Armadillo-type fold RY45_RS07845 IPR019682 Bacteriophage T7, Gp17.5, holin RY45_RS07850 IPR008565 Protein of unknown function DUF847 RY45_RS07850 IPR018537 Peptidoglycan binding domain RY45_RS07850 IPR023346 Lysozyme-like domain RY45_RS07940 IPR005569 Arc-like DNA binding RY45_RS07940 IPR010985 Ribbon-helix-helix RY45_RS07940 IPR013321 Arc-type ribbon-helix-helix RY45_RS07945 IPR005039 Antirepressor protein, C-terminal RY45_RS07945 IPR014054 Bacteriophage regulatory protein, Rha family RY45_RS07965 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS07970 IPR000037 SsrA-binding protein RY45_RS07970 IPR020081 SsrA-binding protein, conserved site RY45_RS07970 IPR023620 Small protein B RY45_RS07975 IPR005031 Streptomyces cyclase/dehydrase RY45_RS07975 IPR023393 START-like domain RY45_RS07980 IPR005346 RnfH protein RY45_RS07980 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RY45_RS07985 IPR016040 NAD(P)-binding domain RY45_RS07990 IPR007450 Lipoprotein SmpA/OmlA RY45_RS07990 IPR026592 Outer membrane protein assembly factor BamE RY45_RS07995 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS07995 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS08000 IPR000845 Nucleoside phosphorylase domain RY45_RS08000 IPR010058 Uridine phosphorylase RY45_RS08000 IPR018016 Nucleoside phosphorylase, conserved site RY45_RS08000 IPR018017 Nucleoside phosphorylase RY45_RS08005 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS08005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RY45_RS08005 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS08010 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RY45_RS08010 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site RY45_RS08010 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RY45_RS08020 IPR017162 Uncharacterised conserved protein UCP037266 RY45_RS08025 IPR011088 Bacteriophage phiNM3, A0EWY4 RY45_RS08030 IPR003660 HAMP linker domain RY45_RS08030 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS08030 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS08035 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS08040 IPR010846 Protein of unknown function DUF1460 RY45_RS08040 IPR023360 Putative xylanase-like C-terminal RY45_RS08045 IPR006153 Cation/H+ exchanger RY45_RS08050 IPR011496 Beta-N-acetylglucosaminidase RY45_RS08050 IPR017853 Glycoside hydrolase, superfamily RY45_RS08055 IPR005170 Transporter-associated domain RY45_RS08055 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS08055 IPR006153 Cation/H+ exchanger RY45_RS08055 IPR016166 FAD-binding, type 2 RY45_RS08055 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS08055 IPR023729 K(+)/H(+) antiporter NhaP2 RY45_RS08055 IPR030151 RY45_RS08055 RY45_RS08060 IPR003709 Peptidase M15B/M15C RY45_RS08060 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RY45_RS08065 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RY45_RS08065 IPR002933 Peptidase M20 RY45_RS08065 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RY45_RS08065 IPR011650 Peptidase M20, dimerisation domain RY45_RS08070 IPR006504 Transcriptional regulator Spx/MgsR RY45_RS08070 IPR006660 Arsenate reductase-like RY45_RS08070 IPR012336 Thioredoxin-like fold RY45_RS08075 IPR000847 Transcription regulator HTH, LysR RY45_RS08075 IPR005119 LysR, substrate-binding RY45_RS08075 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08085 IPR004669 C4-dicarboxylate anaerobic carrier RY45_RS08085 IPR018385 C4-dicarboxylate anaerobic carrier-like RY45_RS08090 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RY45_RS08090 IPR002933 Peptidase M20 RY45_RS08090 IPR011650 Peptidase M20, dimerisation domain RY45_RS08090 IPR017150 Peptidase M20, glutamate carboxypeptidase RY45_RS08095 IPR002761 DUF71 domain RY45_RS08095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS08095 IPR030662 RY45_RS08095 RY45_RS08100 IPR004668 Anaerobic c4-dicarboxylate membrane transporter RY45_RS08105 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RY45_RS08105 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RY45_RS08105 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RY45_RS08105 IPR004522 Asparagine-tRNA ligase RY45_RS08105 IPR012340 Nucleic acid-binding, OB-fold RY45_RS08105 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RY45_RS08115 IPR003660 HAMP linker domain RY45_RS08120 IPR005814 Aminotransferase class-III RY45_RS08120 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RY45_RS08120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS08120 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS08120 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS08125 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RY45_RS08125 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS08125 IPR007197 Radical SAM RY45_RS08125 IPR010722 Biotin and thiamin synthesis-associated domain RY45_RS08125 IPR013785 Aldolase-type TIM barrel RY45_RS08125 IPR024177 Biotin synthase RY45_RS08130 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RY45_RS08130 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RY45_RS08130 IPR004839 Aminotransferase, class I/classII RY45_RS08130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS08130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS08130 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS08130 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria RY45_RS08135 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RY45_RS08135 IPR013216 Methyltransferase type 11 RY45_RS08135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS08140 IPR004472 Dethiobiotin synthase BioD RY45_RS08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08145 IPR001915 Peptidase M48 RY45_RS08145 IPR022919 Peptidase M48, protease HtpX, putative RY45_RS08150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS08155 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS08155 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS08155 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RY45_RS08155 IPR005302 Molybdenum cofactor sulfurase, C-terminal RY45_RS08155 IPR005303 MOSC, N-terminal beta barrel RY45_RS08155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RY45_RS08155 IPR008333 Oxidoreductase, FAD-binding domain RY45_RS08155 IPR011037 Pyruvate kinase-like, insert domain RY45_RS08155 IPR012675 Beta-grasp domain RY45_RS08155 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS08160 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RY45_RS08160 IPR009051 Alpha-helical ferredoxin RY45_RS08160 IPR016040 NAD(P)-binding domain RY45_RS08160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS08160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS08160 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS08160 IPR028261 Dihydroprymidine dehydrogenase domain II RY45_RS08165 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RY45_RS08165 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal RY45_RS08165 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS08165 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS08165 IPR011895 Pyruvate-flavodoxin oxidoreductase RY45_RS08165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS08165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS08165 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain RY45_RS08165 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RY45_RS08165 IPR029061 Thiamin diphosphate-binding fold RY45_RS08165 IPR033412 RY45_RS08165 RY45_RS08170 IPR007420 Protein of unknown function DUF465 RY45_RS08180 IPR002528 Multi antimicrobial extrusion protein RY45_RS08185 IPR001902 Sulphate anion transporter RY45_RS08185 IPR002645 STAS domain RY45_RS08185 IPR011547 Sulphate transporter RY45_RS08190 IPR009267 Protein of unknown function DUF925 RY45_RS08195 IPR016181 Acyl-CoA N-acyltransferase RY45_RS08195 IPR031165 RY45_RS08195 RY45_RS08200 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RY45_RS08200 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS08200 IPR005856 Cysteine synthase K/M RY45_RS08200 IPR005858 Cysteine synthase B RY45_RS08210 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS08210 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS08220 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS08220 IPR009057 Homeodomain-like RY45_RS08220 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS08225 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RY45_RS08225 IPR015590 Aldehyde dehydrogenase domain RY45_RS08225 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS08225 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS08225 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS08225 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS08235 IPR000064 Endopeptidase, NLPC/P60 domain RY45_RS08240 IPR000772 Ricin B lectin domain RY45_RS08240 IPR016183 Leukocidin/porin RY45_RS08240 IPR022220 Hemolytic toxin, N-terminal RY45_RS08245 IPR000847 Transcription regulator HTH, LysR RY45_RS08245 IPR005119 LysR, substrate-binding RY45_RS08245 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08250 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RY45_RS08250 IPR012336 Thioredoxin-like fold RY45_RS08250 IPR019479 Peroxiredoxin, C-terminal RY45_RS08250 IPR024706 Peroxiredoxin, AhpC-type RY45_RS08255 IPR011758 Alpha-L-glutamate ligase-related protein RY45_RS08260 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices RY45_RS08260 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase RY45_RS08265 IPR021109 Aspartic peptidase domain RY45_RS08270 IPR010017 tRNA (mo5U34)-methyltransferase RY45_RS08270 IPR027555 tRNA (mo5U34)-methyltransferase-like RY45_RS08270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS08275 IPR005271 tRNA (cmo5U34)-methyltransferase RY45_RS08275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS08280 IPR002763 Protein of unknown function DUF72 RY45_RS08285 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RY45_RS08285 IPR004115 GAD-like domain RY45_RS08285 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RY45_RS08285 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RY45_RS08285 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RY45_RS08285 IPR012340 Nucleic acid-binding, OB-fold RY45_RS08285 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RY45_RS08285 IPR029351 GAD domain RY45_RS08290 IPR002876 Transcriptional regulator TACO1-like RY45_RS08290 IPR017856 Integrase, N-terminal zinc-binding domain-like RY45_RS08290 IPR026563 Transcriptional regulator TACO1-like, domain 2 RY45_RS08290 IPR026564 Transcriptional regulator TACO1-like, domain 3 RY45_RS08290 IPR029072 YebC-like RY45_RS08295 IPR000917 Sulfatase RY45_RS08295 IPR012549 Domain of unknown function DUF1705 RY45_RS08295 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS08295 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS08300 IPR000600 ROK RY45_RS08300 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08305 IPR003764 N-acetylglucosamine-6-phosphate deacetylase RY45_RS08305 IPR006680 Amidohydrolase 1 RY45_RS08305 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS08305 IPR032466 RY45_RS08305 RY45_RS08310 IPR004547 Glucosamine-6-phosphate isomerase RY45_RS08310 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase RY45_RS08310 IPR018321 Glucosamine-6-phosphate isomerase, conserved site RY45_RS08315 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS08315 IPR003352 Phosphotransferase system, EIIC RY45_RS08315 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component RY45_RS08315 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS08320 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain RY45_RS08320 IPR008965 Carbohydrate-binding domain RY45_RS08320 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain RY45_RS08320 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS08320 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain RY45_RS08320 IPR014756 Immunoglobulin E-set RY45_RS08320 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal RY45_RS08320 IPR015883 Glycoside hydrolase family 20, catalytic core RY45_RS08320 IPR017853 Glycoside hydrolase, superfamily RY45_RS08320 IPR025705 Beta-hexosaminidase RY45_RS08320 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like RY45_RS08325 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RY45_RS08325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS08325 IPR004514 Glutamine-tRNA synthetase RY45_RS08325 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RY45_RS08325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS08325 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RY45_RS08325 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RY45_RS08325 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RY45_RS08325 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RY45_RS08325 IPR022861 Glutamine-tRNA ligase, bacterial RY45_RS08330 IPR002481 Ferric-uptake regulator RY45_RS08330 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08335 IPR027961 Protein of unknown function DUF4442 RY45_RS08335 IPR029069 HotDog domain RY45_RS08340 IPR001226 Flavodoxin, conserved site RY45_RS08340 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS08340 IPR010086 Flavodoxin, long chain RY45_RS08340 IPR029039 Flavoprotein-like RY45_RS08345 IPR002145 Ribbon-helix-helix protein, copG RY45_RS08350 IPR021249 Protein of unknown function DUF2788 RY45_RS08355 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS08355 IPR000639 Epoxide hydrolase-like RY45_RS08355 IPR029058 Alpha/Beta hydrolase fold RY45_RS08360 IPR005621 Regulation modulator SeqA RY45_RS08360 IPR010985 Ribbon-helix-helix RY45_RS08360 IPR013321 Arc-type ribbon-helix-helix RY45_RS08360 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain RY45_RS08365 IPR005843 Alpha-D-phosphohexomutase, C-terminal RY45_RS08365 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RY45_RS08365 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RY45_RS08365 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RY45_RS08365 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RY45_RS08365 IPR016066 Alpha-D-phosphohexomutase, conserved site RY45_RS08370 IPR000620 Drug/metabolite transporter RY45_RS08375 IPR000835 MarR-type HTH domain RY45_RS08375 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08380 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS08380 IPR009057 Homeodomain-like RY45_RS08380 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS08380 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS08385 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RY45_RS08385 IPR012336 Thioredoxin-like fold RY45_RS08390 IPR011757 Lytic transglycosylase MltB RY45_RS08390 IPR023346 Lysozyme-like domain RY45_RS08390 IPR031304 RY45_RS08390 RY45_RS08395 IPR000462 CDP-alcohol phosphatidyltransferase RY45_RS08400 IPR003439 ABC transporter-like RY45_RS08400 IPR003593 AAA+ ATPase domain RY45_RS08400 IPR017871 ABC transporter, conserved site RY45_RS08400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08405 IPR000515 MetI-like domain RY45_RS08410 IPR027020 Protein ynjB RY45_RS08415 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY45_RS08415 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RY45_RS08415 IPR016156 FAD/NAD-linked reductase, dimerisation domain RY45_RS08415 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS08415 IPR032816 RY45_RS08415 RY45_RS08420 IPR003779 Carboxymuconolactone decarboxylase-like RY45_RS08420 IPR004675 Alkylhydroperoxidase AhpD core RY45_RS08420 IPR029032 AhpD-like RY45_RS08425 IPR010865 Protein of unknown function DUF1499 RY45_RS08430 IPR002569 Peptide methionine sulphoxide reductase MsrA RY45_RS08435 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RY45_RS08445 IPR000184 Bacterial surface antigen (D15) RY45_RS08445 IPR010827 Surface antigen variable number RY45_RS08450 IPR007452 Protein of unknown function DUF490 RY45_RS08465 IPR021879 Ribosomal S4P (gammaproteobacterial) RY45_RS08470 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RY45_RS08475 IPR000014 PAS domain RY45_RS08475 IPR000160 GGDEF domain RY45_RS08475 IPR001633 EAL domain RY45_RS08475 IPR029016 GAF domain-like RY45_RS08475 IPR029787 Nucleotide cyclase RY45_RS08480 IPR000189 Prokaryotic transglycosylase, active site RY45_RS08480 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS08480 IPR008939 Lytic transglycosylase, superhelical U-shaped RY45_RS08480 IPR012289 Lytic transglycosylase, superhelical linker RY45_RS08480 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RY45_RS08480 IPR023346 Lysozyme-like domain RY45_RS08485 IPR000843 Transcription regulator HTH, LacI RY45_RS08485 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS08485 IPR028082 Periplasmic binding protein-like I RY45_RS08490 IPR016040 NAD(P)-binding domain RY45_RS08495 IPR006683 Thioesterase superfamily RY45_RS08495 IPR029069 HotDog domain RY45_RS08505 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS08510 IPR000189 Prokaryotic transglycosylase, active site RY45_RS08510 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS08510 IPR018392 LysM domain RY45_RS08510 IPR023346 Lysozyme-like domain RY45_RS08515 IPR001279 Beta-lactamase-like RY45_RS08515 IPR017782 Hydroxyacylglutathione hydrolase RY45_RS08515 IPR032282 RY45_RS08515 RY45_RS08520 IPR013216 Methyltransferase type 11 RY45_RS08520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS08525 IPR002156 Ribonuclease H domain RY45_RS08525 IPR012337 Ribonuclease H-like domain RY45_RS08525 IPR022892 Ribonuclease H RY45_RS08530 IPR006054 DNA polymerase III, epsilon subunit RY45_RS08530 IPR006309 DNA polymerase 3, epsilon subunit RY45_RS08530 IPR012337 Ribonuclease H-like domain RY45_RS08530 IPR013520 Exonuclease, RNase T/DNA polymerase III RY45_RS08540 IPR003695 Ppx/GppA phosphatase RY45_RS08540 IPR022371 Exopolyphosphatase RY45_RS08540 IPR030673 RY45_RS08540 RY45_RS08545 IPR003414 Polyphosphate kinase RY45_RS08545 IPR024953 Polyphosphate kinase middle domain RY45_RS08545 IPR025198 Polyphosphate kinase N-terminal domain RY45_RS08545 IPR025200 Polyphosphate kinase C-terminal domain RY45_RS08550 IPR016867 Glycine cleavage repressor GcvR RY45_RS08555 IPR013498 DNA topoisomerase, type IA, zn finger RY45_RS08555 IPR024402 Domain of unknown function DUF2726 RY45_RS08560 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS08560 IPR002197 DNA binding HTH domain, Fis-type RY45_RS08560 IPR003593 AAA+ ATPase domain RY45_RS08560 IPR009057 Homeodomain-like RY45_RS08560 IPR010518 Flagellar regulatory FleQ RY45_RS08560 IPR011006 CheY-like superfamily RY45_RS08560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS08560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS08560 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS08560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08565 IPR000014 PAS domain RY45_RS08565 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS08565 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS08565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS08570 IPR001789 Signal transduction response regulator, receiver domain RY45_RS08570 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS08570 IPR002197 DNA binding HTH domain, Fis-type RY45_RS08570 IPR003593 AAA+ ATPase domain RY45_RS08570 IPR009057 Homeodomain-like RY45_RS08570 IPR011006 CheY-like superfamily RY45_RS08570 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS08570 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS08570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08570 IPR029995 RY45_RS08570 RY45_RS08575 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RY45_RS08580 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RY45_RS08580 IPR002376 Formyl transferase, N-terminal RY45_RS08580 IPR004607 Phosphoribosylglycinamide formyltransferase RY45_RS08585 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RY45_RS08585 IPR010918 AIR synthase-related protein, C-terminal domain RY45_RS08585 IPR016188 PurM, N-terminal-like RY45_RS08590 IPR005765 Uracil phosphoribosyl transferase RY45_RS08590 IPR029057 Phosphoribosyltransferase-like RY45_RS08595 IPR018642 Protein of unknown function DUF2066 RY45_RS08600 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RY45_RS08600 IPR017788 DnaA regulatory inactivator Hda RY45_RS08600 IPR020591 Chromosomal replication control, initiator DnaA-like RY45_RS08600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08605 IPR006254 Isocitrate lyase RY45_RS08605 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS08605 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RY45_RS08610 IPR001465 Malate synthase RY45_RS08610 IPR006252 Malate synthase A RY45_RS08610 IPR011076 Malate synthase-like RY45_RS08620 IPR016192 APOBEC/CMP deaminase, zinc-binding RY45_RS08620 IPR016193 Cytidine deaminase-like RY45_RS08620 IPR028883 tRNA-specific adenosine deaminase RY45_RS08625 IPR000515 MetI-like domain RY45_RS08625 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS08625 IPR017986 WD40-repeat-containing domain RY45_RS08635 IPR003439 ABC transporter-like RY45_RS08635 IPR003593 AAA+ ATPase domain RY45_RS08635 IPR005670 Phosphate transport system permease protein 1 RY45_RS08635 IPR017871 ABC transporter, conserved site RY45_RS08635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08640 IPR026022 PhoU domain RY45_RS08640 IPR028366 Phosphate transport system protein PhoU RY45_RS08650 IPR017483 Conserved hypothetical protein CHP03034 RY45_RS08655 IPR002514 Transposase IS3/IS911family RY45_RS08655 IPR009057 Homeodomain-like RY45_RS08655 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS08655 IPR013762 Integrase-like, catalytic core RY45_RS08660 IPR002550 Domain of unknown function DUF21 RY45_RS08660 IPR005170 Transporter-associated domain RY45_RS08660 IPR016166 FAD-binding, type 2 RY45_RS08660 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS08670 IPR003726 Homocysteine S-methyltransferase RY45_RS08670 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT RY45_RS08675 IPR002293 Amino acid/polyamine transporter I RY45_RS08675 IPR004754 Amino acid antiporter RY45_RS08685 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS08690 IPR003439 ABC transporter-like RY45_RS08690 IPR003593 AAA+ ATPase domain RY45_RS08690 IPR017871 ABC transporter, conserved site RY45_RS08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08690 IPR030679 RY45_RS08690 RY45_RS08695 IPR000515 MetI-like domain RY45_RS08700 IPR001320 Ionotropic glutamate receptor RY45_RS08700 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS08700 IPR018313 Extracellular solute-binding protein, family 3, conserved site RY45_RS08705 IPR000160 GGDEF domain RY45_RS08705 IPR029787 Nucleotide cyclase RY45_RS08710 IPR000849 Sugar phosphate transporter RY45_RS08710 IPR011701 Major facilitator superfamily RY45_RS08710 IPR020846 Major facilitator superfamily domain RY45_RS08715 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS08715 IPR007895 MASE1 RY45_RS08715 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RY45_RS08720 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS08720 IPR001789 Signal transduction response regulator, receiver domain RY45_RS08720 IPR011006 CheY-like superfamily RY45_RS08720 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08720 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS08725 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RY45_RS08725 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain RY45_RS08735 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS08745 IPR001952 Alkaline phosphatase RY45_RS08745 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS08745 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS08750 IPR001952 Alkaline phosphatase RY45_RS08750 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS08750 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS08755 IPR006073 GTP binding domain RY45_RS08755 IPR016478 GTPase, MTG1 RY45_RS08755 IPR019991 GTP-binding protein, ribosome biogenesis, YlqF RY45_RS08755 IPR023179 GTP-binding protein, orthogonal bundle domain RY45_RS08755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08760 IPR011701 Major facilitator superfamily RY45_RS08760 IPR020846 Major facilitator superfamily domain RY45_RS08765 IPR000286 Histone deacetylase superfamily RY45_RS08765 IPR023801 Histone deacetylase domain RY45_RS08770 IPR018635 Uncharacterised protein family UPF0319 RY45_RS08775 IPR006555 ATP-dependent helicase, C-terminal RY45_RS08775 IPR010614 DEAD2 RY45_RS08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08780 IPR001897 Porin, gammaproteobacterial RY45_RS08780 IPR023614 Porin domain RY45_RS08790 IPR000796 Aspartate/other aminotransferase RY45_RS08790 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RY45_RS08790 IPR004839 Aminotransferase, class I/classII RY45_RS08790 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS08790 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS08800 IPR001453 Molybdopterin binding domain RY45_RS08800 IPR005110 MoeA, N-terminal and linker domain RY45_RS08800 IPR005111 MoeA, C-terminal, domain IV RY45_RS08800 IPR008284 Molybdenum cofactor biosynthesis, conserved site RY45_RS08805 IPR001474 GTP cyclohydrolase I RY45_RS08805 IPR018234 GTP cyclohydrolase I, conserved site RY45_RS08805 IPR020602 GTP cyclohydrolase I domain RY45_RS08810 IPR003660 HAMP linker domain RY45_RS08810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS08810 IPR024478 4HB MCP domain RY45_RS08815 IPR000559 Formate-tetrahydrofolate ligase, FTHFS RY45_RS08815 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site RY45_RS08815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS08825 IPR000847 Transcription regulator HTH, LysR RY45_RS08825 IPR005119 LysR, substrate-binding RY45_RS08825 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08830 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RY45_RS08840 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RY45_RS08840 IPR016040 NAD(P)-binding domain RY45_RS08845 IPR011893 Selenoprotein, Rdx type RY45_RS08845 IPR012336 Thioredoxin-like fold RY45_RS08850 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS08850 IPR016181 Acyl-CoA N-acyltransferase RY45_RS08855 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RY45_RS08855 IPR002933 Peptidase M20 RY45_RS08855 IPR010161 Peptidase M20B, tripeptide aminopeptidase RY45_RS08855 IPR011650 Peptidase M20, dimerisation domain RY45_RS08865 IPR000183 Ornithine/DAP/Arg decarboxylase RY45_RS08865 IPR002985 Arginine decarboxylase RY45_RS08865 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS08865 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RY45_RS08865 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RY45_RS08865 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RY45_RS08865 IPR029066 PLP-binding barrel RY45_RS08880 IPR003660 HAMP linker domain RY45_RS08880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS08880 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS08885 IPR018227 Tryptophan/tyrosine permease RY45_RS08890 IPR006056 Enamine/imine deaminase YjgF-like RY45_RS08890 IPR006175 YjgF/Yer057p/UK114 family RY45_RS08890 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RY45_RS08895 IPR005130 Serine dehydratase-like, alpha subunit RY45_RS08895 IPR021144 Uncharacterised protein family UPF0597 RY45_RS08900 IPR013559 YheO-like RY45_RS08905 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RY45_RS08905 IPR013078 Histidine phosphatase superfamily, clade-1 RY45_RS08905 IPR029033 Histidine phosphatase superfamily RY45_RS08910 IPR002711 HNH endonuclease RY45_RS08910 IPR003615 HNH nuclease RY45_RS08920 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS08920 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS08925 IPR022742 Putative lysophospholipase RY45_RS08925 IPR029058 Alpha/Beta hydrolase fold RY45_RS08930 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RY45_RS08930 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RY45_RS08930 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RY45_RS08930 IPR014362 Glutamate dehydrogenase RY45_RS08930 IPR016040 NAD(P)-binding domain RY45_RS08935 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RY45_RS08935 IPR002942 RNA-binding S4 domain RY45_RS08935 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS08935 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RY45_RS08935 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS08940 IPR011701 Major facilitator superfamily RY45_RS08940 IPR020846 Major facilitator superfamily domain RY45_RS08945 IPR002125 CMP/dCMP deaminase, zinc-binding RY45_RS08945 IPR016192 APOBEC/CMP deaminase, zinc-binding RY45_RS08945 IPR016193 Cytidine deaminase-like RY45_RS08950 IPR000847 Transcription regulator HTH, LysR RY45_RS08950 IPR005119 LysR, substrate-binding RY45_RS08950 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08955 IPR011701 Major facilitator superfamily RY45_RS08955 IPR020846 Major facilitator superfamily domain RY45_RS08960 IPR010499 Bacterial transcription activator, effector binding RY45_RS08960 IPR011256 Regulatory factor, effector binding domain RY45_RS08960 IPR029441 Integron-associated effector binding protein RY45_RS08965 IPR006683 Thioesterase superfamily RY45_RS08965 IPR029069 HotDog domain RY45_RS08975 IPR000620 Drug/metabolite transporter RY45_RS08980 IPR007486 Protein of unknown function DUF533 RY45_RS08980 IPR029024 TerB-like RY45_RS08985 IPR000524 Transcription regulator HTH, GntR RY45_RS08985 IPR004839 Aminotransferase, class I/classII RY45_RS08985 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS08985 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS08985 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS08985 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS08990 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RY45_RS08995 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RY45_RS09000 IPR011724 Cyd operon protein YbgT RY45_RS09000 IPR012994 Membrane bound YbgT-like RY45_RS09005 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RY45_RS09005 IPR011701 Major facilitator superfamily RY45_RS09005 IPR020846 Major facilitator superfamily domain RY45_RS09010 IPR001395 Aldo/keto reductase RY45_RS09010 IPR018170 Aldo/keto reductase, conserved site RY45_RS09010 IPR020471 Aldo/keto reductase subgroup RY45_RS09010 IPR023210 NADP-dependent oxidoreductase domain RY45_RS09015 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RY45_RS09015 IPR011008 Dimeric alpha-beta barrel RY45_RS09020 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS09020 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS09030 IPR000847 Transcription regulator HTH, LysR RY45_RS09030 IPR005119 LysR, substrate-binding RY45_RS09030 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09035 IPR000577 RY45_RS09035 RY45_RS09035 IPR005999 Glycerol kinase RY45_RS09035 IPR018483 Carbohydrate kinase, FGGY, conserved site RY45_RS09035 IPR018484 Carbohydrate kinase, FGGY, N-terminal RY45_RS09035 IPR018485 Carbohydrate kinase, FGGY, C-terminal RY45_RS09040 IPR000425 Major intrinsic protein RY45_RS09040 IPR022357 Major intrinsic protein, conserved site RY45_RS09040 IPR023271 Aquaporin-like RY45_RS09045 IPR000849 Sugar phosphate transporter RY45_RS09045 IPR005267 Glycerol-3-phosphate transporter RY45_RS09045 IPR011701 Major facilitator superfamily RY45_RS09045 IPR020846 Major facilitator superfamily domain RY45_RS09045 IPR021159 Glycerate/sugar phosphate transporter, conserved site RY45_RS09050 IPR001034 HTH DeoR N-terminal domain RY45_RS09050 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09050 IPR014036 DeoR C-terminal sensor domain RY45_RS09050 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RY45_RS09055 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RY45_RS09055 IPR006076 FAD dependent oxidoreductase RY45_RS09055 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS09055 IPR031656 RY45_RS09055 RY45_RS09060 IPR004129 Glycerophosphoryl diester phosphodiesterase RY45_RS09060 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RY45_RS09060 IPR030395 RY45_RS09060 RY45_RS09065 IPR024445 Transposase, ISXO2-like RY45_RS09070 IPR006218 DAHP synthetase I/KDSA RY45_RS09070 IPR006219 DHAP synthase, class 1 RY45_RS09070 IPR013785 Aldolase-type TIM barrel RY45_RS09075 IPR002701 Chorismate mutase RY45_RS09075 IPR003099 Prephenate dehydrogenase RY45_RS09075 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein RY45_RS09075 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS09075 IPR011277 Chorismate mutase, T-protein RY45_RS09075 IPR016040 NAD(P)-binding domain RY45_RS09075 IPR020822 Chorismate mutase, type II RY45_RS09080 IPR000847 Transcription regulator HTH, LysR RY45_RS09080 IPR005119 LysR, substrate-binding RY45_RS09080 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09085 IPR007335 Protein of unknown function DUF413 RY45_RS09090 IPR005658 Proteinase inhibitor I11, ecotin RY45_RS09090 IPR023189 Proteinase inhibitor I11, ecotin domain RY45_RS09095 IPR011460 Protein of unknown function DUF1566 RY45_RS09100 IPR011460 Protein of unknown function DUF1566 RY45_RS09105 IPR002884 Proprotein convertase, P RY45_RS09105 IPR008979 Galactose-binding domain-like RY45_RS09105 IPR013783 Immunoglobulin-like fold RY45_RS09105 IPR018905 Alpha-galactosidase, NEW3 domain RY45_RS09110 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RY45_RS09110 IPR002470 Peptidase S9A, prolyl oligopeptidase RY45_RS09110 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS09110 IPR023302 Peptidase S9A, N-terminal domain RY45_RS09110 IPR029058 Alpha/Beta hydrolase fold RY45_RS09115 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS09115 IPR010916 TonB box, conserved site RY45_RS09115 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RY45_RS09115 IPR011276 TonB-dependent haem/haemoglobin receptor RY45_RS09115 IPR012910 TonB-dependent receptor, plug RY45_RS09120 IPR000917 Sulfatase RY45_RS09120 IPR012159 Membrane sulfatase, HI0842-related RY45_RS09120 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS09120 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS09120 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain RY45_RS09125 IPR009857 Uncharacterised protein family UPF0352 RY45_RS09125 IPR023202 YejL-like domain RY45_RS09130 IPR007358 Nucleoid-associated protein NdpA RY45_RS09135 IPR006060 Maltose binding protein RY45_RS09135 IPR006061 Bacterial extracellular solute-binding family 1, conserved site RY45_RS09140 IPR000515 MetI-like domain RY45_RS09140 IPR029345 Maltose transport system permease protein MalF, P2 domain RY45_RS09145 IPR000515 MetI-like domain RY45_RS09150 IPR003439 ABC transporter-like RY45_RS09150 IPR003593 AAA+ ATPase domain RY45_RS09150 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS09150 IPR012340 Nucleic acid-binding, OB-fold RY45_RS09150 IPR013611 Transport-associated OB, type 2 RY45_RS09150 IPR017871 ABC transporter, conserved site RY45_RS09150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09155 IPR016898 Polyphosphate kinase 2 RY45_RS09155 IPR022486 Polyphosphate kinase 2, PA0141 RY45_RS09155 IPR022488 Polyphosphate kinase-2-related RY45_RS09155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09160 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS09160 IPR000639 Epoxide hydrolase-like RY45_RS09160 IPR029058 Alpha/Beta hydrolase fold RY45_RS09165 IPR010583 MltA-interacting MipA RY45_RS09170 IPR002549 Uncharacterised protein family UPF0118 RY45_RS09175 IPR001455 TusA-like domain RY45_RS09180 IPR001915 Peptidase M48 RY45_RS09180 IPR011990 Tetratricopeptide-like helical domain RY45_RS09180 IPR030873 RY45_RS09180 RY45_RS09185 IPR012336 Thioredoxin-like fold RY45_RS09185 IPR013740 Redoxin RY45_RS09185 IPR017937 Thioredoxin, conserved site RY45_RS09190 IPR006659 Arsenate reductase RY45_RS09190 IPR006660 Arsenate reductase-like RY45_RS09190 IPR012336 Thioredoxin-like fold RY45_RS09195 IPR018643 Protein of unknown function DUF2069, membrane RY45_RS09200 IPR003199 Choloylglycine hydrolase/Peptidase C59 family RY45_RS09200 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS09200 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RY45_RS09205 IPR007431 Acyl carrier protein phosphodiesterase RY45_RS09210 IPR006680 Amidohydrolase 1 RY45_RS09210 IPR010229 Peptidase M38, beta-aspartyl dipeptidase RY45_RS09210 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS09210 IPR032466 RY45_RS09210 RY45_RS09215 IPR005642 Protein of unknown function DUF340, prokaryotic membrane RY45_RS09220 IPR003439 ABC transporter-like RY45_RS09220 IPR003593 AAA+ ATPase domain RY45_RS09220 IPR017871 ABC transporter, conserved site RY45_RS09220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09220 IPR030679 RY45_RS09220 RY45_RS09225 IPR001320 Ionotropic glutamate receptor RY45_RS09225 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS09225 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein RY45_RS09225 IPR018313 Extracellular solute-binding protein, family 3, conserved site RY45_RS09230 IPR000515 MetI-like domain RY45_RS09230 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS09235 IPR000515 MetI-like domain RY45_RS09235 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS09240 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family RY45_RS09245 IPR001989 Radical-activating enzyme, conserved site RY45_RS09245 IPR007197 Radical SAM RY45_RS09245 IPR012838 Pyruvate formate-lyase activating enzyme RY45_RS09250 IPR000014 PAS domain RY45_RS09250 IPR000160 GGDEF domain RY45_RS09250 IPR001610 PAC motif RY45_RS09250 IPR001633 EAL domain RY45_RS09250 IPR003018 GAF domain RY45_RS09250 IPR013767 PAS fold RY45_RS09250 IPR029016 GAF domain-like RY45_RS09250 IPR029787 Nucleotide cyclase RY45_RS09255 IPR001763 Rhodanese-like domain RY45_RS09255 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY45_RS09255 IPR016156 FAD/NAD-linked reductase, dimerisation domain RY45_RS09255 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS09260 IPR001599 Alpha-2-macroglobulin RY45_RS09260 IPR002890 Alpha-2-macroglobulin, N-terminal RY45_RS09260 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RY45_RS09260 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RY45_RS09260 IPR021868 Alpha-2-macroglobulin MG1 domain RY45_RS09260 IPR026284 Alpha-2-macroglobulin domain protein, bacteria RY45_RS09265 IPR001264 Glycosyl transferase, family 51 RY45_RS09265 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS09265 IPR009647 Penicillin-binding, C-terminal RY45_RS09265 IPR011815 Penicillin-binding protein 1C RY45_RS09265 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS09265 IPR023346 Lysozyme-like domain RY45_RS09275 IPR001763 Rhodanese-like domain RY45_RS09275 IPR003720 tRNA sulfurtransferase ThiI RY45_RS09275 IPR004114 THUMP RY45_RS09275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS09275 IPR020536 Thil, AANH domain RY45_RS09285 IPR005115 Uncharacterised domain UPF0126 RY45_RS09290 IPR001029 Flagellin, D0/D1 domain RY45_RS09290 IPR001492 Flagellin RY45_RS09295 IPR001029 Flagellin, D0/D1 domain RY45_RS09295 IPR001492 Flagellin RY45_RS09300 IPR005186 Flagellar protein FlaG protein RY45_RS09305 IPR003481 Flagellar hook-associated protein 2, N-terminal RY45_RS09305 IPR010809 Flagellar hook-associated 2, C-terminal RY45_RS09305 IPR010810 Flagellin hook, IN motif RY45_RS09310 IPR003713 Flagellar protein FliS RY45_RS09320 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like RY45_RS09325 IPR002491 ABC transporter periplasmic binding domain RY45_RS09330 IPR004485 Cobalamin biosynthesis CobD/CbiB RY45_RS09335 IPR000845 Nucleoside phosphorylase domain RY45_RS09335 IPR010049 MTA/SAH nucleosidase RY45_RS09335 IPR018017 Nucleoside phosphorylase RY45_RS09340 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS09345 IPR003689 Zinc/iron permease RY45_RS09350 IPR003660 HAMP linker domain RY45_RS09350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS09350 IPR024478 4HB MCP domain RY45_RS09355 IPR000760 Inositol monophosphatase RY45_RS09355 IPR020550 Inositol monophosphatase, conserved site RY45_RS09355 IPR022337 Inositol monophosphatase, SuhB RY45_RS09365 IPR004045 Glutathione S-transferase, N-terminal RY45_RS09365 IPR004046 Glutathione S-transferase, C-terminal RY45_RS09365 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS09365 IPR012336 Thioredoxin-like fold RY45_RS09370 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RY45_RS09370 IPR011701 Major facilitator superfamily RY45_RS09370 IPR020846 Major facilitator superfamily domain RY45_RS09375 IPR007838 Cell division protein ZapA-like RY45_RS09380 IPR011978 Uncharacterised protein family UPF0149 RY45_RS09385 IPR002938 Monooxygenase, FAD-binding RY45_RS09385 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RY45_RS09385 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase RY45_RS09385 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RY45_RS09385 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS09390 IPR002938 Monooxygenase, FAD-binding RY45_RS09390 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RY45_RS09390 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS09395 IPR006222 Glycine cleavage T-protein, N-terminal RY45_RS09395 IPR006223 Glycine cleavage system T protein RY45_RS09395 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RY45_RS09395 IPR022903 Glycine cleavage system T protein, bacteria RY45_RS09395 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RY45_RS09395 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA RY45_RS09395 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RY45_RS09400 IPR002930 Glycine cleavage system H-protein RY45_RS09400 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RY45_RS09400 IPR011053 Single hybrid motif RY45_RS09400 IPR017453 Glycine cleavage system H-protein, subgroup RY45_RS09405 IPR003437 Glycine cleavage system P protein, homodimeric RY45_RS09405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS09405 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS09405 IPR020580 Glycine cleavage system P-protein, N-terminal RY45_RS09405 IPR020581 Glycine cleavage system P protein RY45_RS09410 IPR005524 Protein of unknown function DUF318, transmembrane RY45_RS09415 IPR001845 HTH ArsR-type DNA-binding domain RY45_RS09415 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09420 IPR001845 HTH ArsR-type DNA-binding domain RY45_RS09420 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09425 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD RY45_RS09430 IPR003593 AAA+ ATPase domain RY45_RS09430 IPR016300 Arsenical pump ATPase, ArsA/GET3 RY45_RS09430 IPR025723 Anion-transporting ATPase-like domain RY45_RS09430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09430 IPR027541 Arsenical pump-driving ATPase RY45_RS09435 IPR002657 Bile acid:sodium symporter RY45_RS09435 IPR004706 Arsenical-resistance protein ACR3 RY45_RS09440 IPR006659 Arsenate reductase RY45_RS09440 IPR006660 Arsenate reductase-like RY45_RS09440 IPR012336 Thioredoxin-like fold RY45_RS09445 IPR013216 Methyltransferase type 11 RY45_RS09445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS09455 IPR011701 Major facilitator superfamily RY45_RS09455 IPR020846 Major facilitator superfamily domain RY45_RS09460 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RY45_RS09460 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RY45_RS09460 IPR012081 Alkyl hydroperoxide reductase subunit F RY45_RS09460 IPR012336 Thioredoxin-like fold RY45_RS09460 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS09465 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RY45_RS09465 IPR012336 Thioredoxin-like fold RY45_RS09465 IPR017559 Alkyl hydroperoxide reductase subunit C RY45_RS09465 IPR019479 Peroxiredoxin, C-terminal RY45_RS09465 IPR024706 Peroxiredoxin, AhpC-type RY45_RS09470 IPR000644 CBS domain RY45_RS09470 IPR013785 Aldolase-type TIM barrel RY45_RS09475 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RY45_RS09480 IPR002616 tRNA-guanine(15) transglycosylase-like RY45_RS09480 IPR004803 Queuine tRNA-ribosyltransferase RY45_RS09485 IPR003849 Preprotein translocase YajC RY45_RS09490 IPR001036 Acriflavin resistance protein RY45_RS09490 IPR005791 Protein translocase subunit SecD RY45_RS09490 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RY45_RS09490 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RY45_RS09490 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RY45_RS09490 IPR027398 SecD export protein N-terminal TM domain RY45_RS09495 IPR005665 Protein-export membrane protein SecF, bacterial RY45_RS09495 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RY45_RS09495 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RY45_RS09495 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RY45_RS09500 IPR001763 Rhodanese-like domain RY45_RS09505 IPR001440 Tetratricopeptide TPR1 RY45_RS09505 IPR011990 Tetratricopeptide-like helical domain RY45_RS09505 IPR019734 Tetratricopeptide repeat RY45_RS09505 IPR023605 Lipoprotein NlpI RY45_RS09510 IPR001539 Peptidase U32 RY45_RS09515 IPR001539 Peptidase U32 RY45_RS09520 IPR003033 SCP2 sterol-binding domain RY45_RS09520 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT RY45_RS09530 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS09530 IPR004384 RNA methyltransferase TrmH, group 1 RY45_RS09530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS09530 IPR029028 Alpha/beta knot methyltransferases RY45_RS09535 IPR000944 Transcription regulator Rrf2-like RY45_RS09535 IPR010242 Transcription factor HTH, IscR RY45_RS09535 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09535 IPR030489 RY45_RS09535 RY45_RS09540 IPR000192 Aminotransferase class V domain RY45_RS09540 IPR010240 Cysteine desulfurase RY45_RS09540 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS09540 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS09540 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS09540 IPR016454 Cysteine desulfurase, NifS RY45_RS09540 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RY45_RS09545 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RY45_RS09545 IPR011339 ISC system FeS cluster assembly, IscU scaffold RY45_RS09550 IPR000361 FeS cluster biogenesis RY45_RS09550 IPR011302 ISC system FeS cluster assembly, IscA scaffold RY45_RS09550 IPR016092 FeS cluster insertion protein RY45_RS09550 IPR017870 FeS cluster insertion, C-terminal, conserved site RY45_RS09555 IPR001623 DnaJ domain RY45_RS09555 IPR004640 Co-chaperone Hsc20 RY45_RS09555 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RY45_RS09560 IPR010236 ISC system FeS cluster assembly, HscA chaperone RY45_RS09560 IPR013126 Heat shock protein 70 family RY45_RS09560 IPR018181 Heat shock protein 70, conserved site RY45_RS09560 IPR029047 Heat shock protein 70kD, peptide-binding domain RY45_RS09560 IPR029048 Heat shock protein 70kD, C-terminal domain RY45_RS09565 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS09565 IPR001055 Adrenodoxin RY45_RS09565 IPR011536 Ferredoxin, 2Fe-2S type RY45_RS09565 IPR012675 Beta-grasp domain RY45_RS09565 IPR018298 Adrenodoxin, iron-sulphur binding site RY45_RS09570 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RY45_RS09570 IPR008330 Peptidase M17, peptidase B RY45_RS09570 IPR011356 Leucine aminopeptidase/peptidase B RY45_RS09575 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RY45_RS09575 IPR008330 Peptidase M17, peptidase B RY45_RS09575 IPR011356 Leucine aminopeptidase/peptidase B RY45_RS09580 IPR001564 Nucleoside diphosphate kinase RY45_RS09580 IPR023005 Nucleoside diphosphate kinase, active site RY45_RS09585 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RY45_RS09585 IPR007197 Radical SAM RY45_RS09585 IPR013785 Aldolase-type TIM barrel RY45_RS09585 IPR027492 Dual-specificity RNA methyltransferase RlmN RY45_RS09590 IPR011990 Tetratricopeptide-like helical domain RY45_RS09590 IPR013360 Pilus biogenesis/stability type IV, PilW RY45_RS09590 IPR019734 Tetratricopeptide repeat RY45_RS09595 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS09595 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS09595 IPR025194 Domain of unknown function DUF4115 RY45_RS09600 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RY45_RS09600 IPR013785 Aldolase-type TIM barrel RY45_RS09600 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RY45_RS09600 IPR029065 Enolase C-terminal domain-like RY45_RS09605 IPR004154 Anticodon-binding RY45_RS09605 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RY45_RS09605 IPR015807 Histidine-tRNA ligase RY45_RS09610 IPR011990 Tetratricopeptide-like helical domain RY45_RS09610 IPR018704 Domain of unknown function DUF09976 RY45_RS09610 IPR026039 Uncharacterised protein family UPF0070 RY45_RS09615 IPR002372 Pyrrolo-quinoline quinone repeat RY45_RS09615 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RY45_RS09615 IPR017687 Outer membrane protein assembly factor BamB RY45_RS09615 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RY45_RS09615 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RY45_RS09620 IPR006073 GTP binding domain RY45_RS09620 IPR015946 K homology domain-like, alpha/beta RY45_RS09620 IPR016484 GTP-binding protein EngA RY45_RS09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09620 IPR032859 RY45_RS09620 RY45_RS09625 IPR010807 Protein of unknown function DUF1407 RY45_RS09625 IPR029037 YfgJ-like RY45_RS09630 IPR000189 Prokaryotic transglycosylase, active site RY45_RS09630 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS09630 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS09630 IPR023346 Lysozyme-like domain RY45_RS09630 IPR023703 Membrane-bound lytic murein transglycosylase F RY45_RS09635 IPR010073 Phosphoribosylformylglycinamidine synthase RY45_RS09635 IPR010918 AIR synthase-related protein, C-terminal domain RY45_RS09635 IPR016188 PurM, N-terminal-like RY45_RS09635 IPR029062 Class I glutamine amidotransferase-like RY45_RS09640 IPR000014 PAS domain RY45_RS09640 IPR003607 HD/PDEase domain RY45_RS09640 IPR006674 HD domain RY45_RS09640 IPR013656 PAS fold-4 RY45_RS09640 IPR029016 GAF domain-like RY45_RS09645 IPR000014 PAS domain RY45_RS09645 IPR003607 HD/PDEase domain RY45_RS09645 IPR006674 HD domain RY45_RS09645 IPR013656 PAS fold-4 RY45_RS09650 IPR013702 FIST domain, N-terminal RY45_RS09650 IPR019494 FIST C domain RY45_RS09655 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RY45_RS09655 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RY45_RS09660 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RY45_RS09660 IPR003918 NADH:ubiquinone oxidoreductase RY45_RS09660 IPR010227 NADH-quinone oxidoreductase, chain M/4 RY45_RS09665 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RY45_RS09665 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RY45_RS09665 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RY45_RS09670 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RY45_RS09675 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RY45_RS09680 IPR010226 NADH-quinone oxidoreductase, chain I RY45_RS09680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS09680 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS09685 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RY45_RS09685 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RY45_RS09690 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RY45_RS09690 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS09690 IPR006656 Molybdopterin oxidoreductase RY45_RS09690 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS09690 IPR009010 Aspartate decarboxylase-like domain RY45_RS09690 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RY45_RS09690 IPR012675 Beta-grasp domain RY45_RS09690 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RY45_RS09695 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RY45_RS09695 IPR011537 NADH ubiquinone oxidoreductase, F subunit RY45_RS09695 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RY45_RS09695 IPR019554 Soluble ligand binding domain RY45_RS09695 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RY45_RS09700 IPR002023 NADH-quinone oxidoreductase subunit E-like RY45_RS09700 IPR012336 Thioredoxin-like fold RY45_RS09705 IPR001135 NADH-quinone oxidoreductase, subunit D RY45_RS09705 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RY45_RS09705 IPR010218 NADH dehydrogenase, subunit C RY45_RS09705 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RY45_RS09705 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RY45_RS09705 IPR023062 NADH dehydrogenase, subunit CD RY45_RS09705 IPR029014 NiFe hydrogenase-like RY45_RS09710 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RY45_RS09710 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RY45_RS09715 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RY45_RS09715 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RY45_RS09720 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS09720 IPR025713 Motility protein B, N-terminal domain RY45_RS09725 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS09725 IPR022522 Flagellar motor stator, MotA RY45_RS09735 IPR007621 TPM domain RY45_RS09740 IPR007621 TPM domain RY45_RS09745 IPR007156 LemA RY45_RS09745 IPR023353 LemA-like domain RY45_RS09750 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase RY45_RS09750 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RY45_RS09760 IPR000504 RNA recognition motif domain RY45_RS09760 IPR012677 Nucleotide-binding, alpha-beta plait RY45_RS09765 IPR001395 Aldo/keto reductase RY45_RS09765 IPR020471 Aldo/keto reductase subgroup RY45_RS09765 IPR023210 NADP-dependent oxidoreductase domain RY45_RS09770 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS09770 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS09775 IPR002347 Glucose/ribitol dehydrogenase RY45_RS09775 IPR016040 NAD(P)-binding domain RY45_RS09780 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RY45_RS09780 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS09780 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS09780 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS09780 IPR023603 Threonine aldolase RY45_RS09785 IPR000014 PAS domain RY45_RS09785 IPR013656 PAS fold-4 RY45_RS09790 IPR001789 Signal transduction response regulator, receiver domain RY45_RS09790 IPR011006 CheY-like superfamily RY45_RS09790 IPR028976 CheC-like domain RY45_RS09795 IPR000847 Transcription regulator HTH, LysR RY45_RS09795 IPR005119 LysR, substrate-binding RY45_RS09795 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09800 IPR021367 Protein of unknown function DUF2982 RY45_RS09805 IPR000160 GGDEF domain RY45_RS09805 IPR001633 EAL domain RY45_RS09805 IPR029787 Nucleotide cyclase RY45_RS09810 IPR000415 Nitroreductase-like RY45_RS09810 IPR016446 Flavin oxidoreductase Frp family RY45_RS09810 IPR029479 Nitroreductase RY45_RS09820 IPR010393 Protein of unknown function DUF991 RY45_RS09820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS09825 IPR011701 Major facilitator superfamily RY45_RS09825 IPR020846 Major facilitator superfamily domain RY45_RS09830 IPR000847 Transcription regulator HTH, LysR RY45_RS09830 IPR005119 LysR, substrate-binding RY45_RS09830 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09835 IPR000847 Transcription regulator HTH, LysR RY45_RS09835 IPR005119 LysR, substrate-binding RY45_RS09835 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS09840 IPR000926 GTP cyclohydrolase II, RibA RY45_RS09840 IPR032677 RY45_RS09840 RY45_RS09845 IPR003136 Cytidylate kinase RY45_RS09845 IPR011994 Cytidylate kinase domain RY45_RS09845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09850 IPR000110 Ribosomal protein S1 RY45_RS09850 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS09850 IPR012340 Nucleic acid-binding, OB-fold RY45_RS09850 IPR022967 RNA-binding domain, S1 RY45_RS09855 IPR000119 Histone-like bacterial DNA-binding protein RY45_RS09855 IPR005685 Integration host factor, beta subunit RY45_RS09855 IPR010992 Integration host factor (IHF)-like DNA-binding domain RY45_RS09855 IPR020816 Histone-like DNA-binding protein, conserved site RY45_RS09860 IPR010445 Protein of unknown function DUF1049 RY45_RS09860 IPR032906 RY45_RS09860 RY45_RS09865 IPR011990 Tetratricopeptide-like helical domain RY45_RS09865 IPR019734 Tetratricopeptide repeat RY45_RS09865 IPR030865 RY45_RS09865 RY45_RS09870 IPR001754 Orotidine 5'-phosphate decarboxylase domain RY45_RS09870 IPR011060 Ribulose-phosphate binding barrel RY45_RS09870 IPR013785 Aldolase-type TIM barrel RY45_RS09870 IPR014732 Orotidine 5'-phosphate decarboxylase RY45_RS09870 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RY45_RS09875 IPR002610 Peptidase S54, rhomboid RY45_RS09875 IPR022764 Peptidase S54, rhomboid domain RY45_RS09875 IPR023826 Rhomboid-like serine protease, proteobacteria RY45_RS09880 IPR005636 DTW RY45_RS09885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS09885 IPR018317 Queuosine biosynthesis protein QueC RY45_RS09890 IPR007197 Radical SAM RY45_RS09890 IPR013785 Aldolase-type TIM barrel RY45_RS09890 IPR024924 7-carboxy-7-deazaguanine synthase-like RY45_RS09890 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria RY45_RS09895 IPR024530 Protein of unknown function DUF3820 RY45_RS09900 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RY45_RS09900 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RY45_RS09905 IPR001801 Histone-like protein H-NS RY45_RS09905 IPR027444 Histone-like protein H-NS, C-terminal domain RY45_RS09905 IPR027454 Histone-like protein H-NS family, oligomerisation domain RY45_RS09910 IPR018461 Na+/H+ antiporter, NhaC-like RY45_RS09915 IPR001267 Thymidine kinase RY45_RS09915 IPR020633 Thymidine kinase, conserved site RY45_RS09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09920 IPR012548 Protein of unknown function DUF1704 RY45_RS09920 IPR012656 Conserved hypothetical protein CHP02421, QEGLA RY45_RS09925 IPR019660 Putative sensory transduction regulator YbjN RY45_RS09935 IPR008514 Type VI secretion system effector, Hcp RY45_RS09940 IPR006531 Gp5 N-terminal RY45_RS09940 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RY45_RS09940 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RY45_RS09950 IPR024445 Transposase, ISXO2-like RY45_RS09980 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RY45_RS09980 IPR016040 NAD(P)-binding domain RY45_RS09980 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RY45_RS09980 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RY45_RS09980 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RY45_RS09985 IPR002059 Cold-shock protein, DNA-binding RY45_RS09985 IPR011129 Cold shock protein RY45_RS09985 IPR012156 Cold shock, CspA RY45_RS09985 IPR012340 Nucleic acid-binding, OB-fold RY45_RS09985 IPR012751 CspD, cold shock RY45_RS09985 IPR019844 Cold-shock conserved site RY45_RS09990 IPR003769 Adaptor protein ClpS, core RY45_RS09990 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RY45_RS09990 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RY45_RS09995 IPR001270 ClpA/B family RY45_RS09995 IPR003593 AAA+ ATPase domain RY45_RS09995 IPR003959 ATPase, AAA-type, core RY45_RS09995 IPR004176 Clp, N-terminal RY45_RS09995 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RY45_RS09995 IPR018368 ClpA/B, conserved site 1 RY45_RS09995 IPR019489 Clp ATPase, C-terminal RY45_RS09995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS09995 IPR028299 ClpA/B, conserved site 2 RY45_RS10000 IPR004368 Translation initiation factor IF-1 RY45_RS10000 IPR006196 RNA-binding domain, S1, IF1 type RY45_RS10000 IPR012340 Nucleic acid-binding, OB-fold RY45_RS10000 IPR022967 RNA-binding domain, S1 RY45_RS10005 IPR007471 Arginine-tRNA-protein transferase, N-terminal RY45_RS10005 IPR007472 Arginine-tRNA-protein transferase, C-terminal RY45_RS10005 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10005 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic RY45_RS10005 IPR030700 RY45_RS10005 RY45_RS10010 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RY45_RS10010 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10015 IPR008816 Glycine zipper 2TM domain RY45_RS10020 IPR000160 GGDEF domain RY45_RS10020 IPR001789 Signal transduction response regulator, receiver domain RY45_RS10020 IPR011006 CheY-like superfamily RY45_RS10020 IPR029787 Nucleotide cyclase RY45_RS10025 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RY45_RS10025 IPR005982 Thioredoxin reductase RY45_RS10025 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RY45_RS10025 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10030 IPR000485 AsnC-type HTH domain RY45_RS10030 IPR011008 Dimeric alpha-beta barrel RY45_RS10030 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10030 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RY45_RS10030 IPR019887 Transcription regulator AsnC-type, C-terminal RY45_RS10030 IPR019888 Transcription regulator AsnC-type RY45_RS10035 IPR002543 FtsK domain RY45_RS10035 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10035 IPR018541 FtsK gamma domain RY45_RS10035 IPR025199 Domain of unknown function DUF4117 RY45_RS10035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10040 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RY45_RS10040 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RY45_RS10040 IPR029046 Lipoprotein localisation LolA/LolB/LppX RY45_RS10045 IPR003593 AAA+ ATPase domain RY45_RS10045 IPR003959 ATPase, AAA-type, core RY45_RS10045 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RY45_RS10045 IPR021886 MgsA AAA+ ATPase C-terminal RY45_RS10045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10045 IPR032423 RY45_RS10045 RY45_RS10055 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RY45_RS10055 IPR002317 Serine-tRNA ligase, type1 RY45_RS10055 IPR010978 tRNA-binding arm RY45_RS10055 IPR015866 Serine-tRNA synthetase, type1, N-terminal RY45_RS10060 IPR003825 Colicin V production, CvpA RY45_RS10065 IPR000836 Phosphoribosyltransferase domain RY45_RS10065 IPR005854 Amidophosphoribosyl transferase RY45_RS10065 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS10065 IPR029057 Phosphoribosyltransferase-like RY45_RS10070 IPR009078 Ferritin-like superfamily RY45_RS10070 IPR010386 tRNA-hydroxylase MiaE RY45_RS10070 IPR012347 Ferritin-related RY45_RS10075 IPR003439 ABC transporter-like RY45_RS10075 IPR003593 AAA+ ATPase domain RY45_RS10075 IPR017871 ABC transporter, conserved site RY45_RS10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10080 IPR003439 ABC transporter-like RY45_RS10080 IPR003593 AAA+ ATPase domain RY45_RS10080 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS10080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10085 IPR000515 MetI-like domain RY45_RS10085 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RY45_RS10090 IPR000515 MetI-like domain RY45_RS10095 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS10095 IPR030678 RY45_RS10095 RY45_RS10100 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS10100 IPR002197 DNA binding HTH domain, Fis-type RY45_RS10100 IPR003593 AAA+ ATPase domain RY45_RS10100 IPR009057 Homeodomain-like RY45_RS10100 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS10100 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10105 IPR007157 PspA/IM30 RY45_RS10105 IPR014319 Phage shock protein, PspA RY45_RS10110 IPR009554 Phage shock protein, PspB RY45_RS10115 IPR007168 Phage shock protein, PspC, N-terminal RY45_RS10115 IPR014320 Phage shock protein, PspC RY45_RS10120 IPR007413 Protein of unknown function DUF463, YcjX-like protein RY45_RS10120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10125 IPR006507 Uncharacterised protein family UPF0283 RY45_RS10125 IPR021147 Protein of unknown function DUF697 RY45_RS10130 IPR001273 Aromatic amino acid hydroxylase RY45_RS10130 IPR005960 Phenylalanine-4-hydroxylase, monomeric form RY45_RS10130 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site RY45_RS10130 IPR019774 Aromatic amino acid hydroxylase, C-terminal RY45_RS10135 IPR001533 Transcriptional coactivator/pterin dehydratase RY45_RS10140 IPR000014 PAS domain RY45_RS10140 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS10140 IPR003593 AAA+ ATPase domain RY45_RS10140 IPR009057 Homeodomain-like RY45_RS10140 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS10140 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS10140 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10140 IPR030828 RY45_RS10140 RY45_RS10145 IPR025293 Protein of unknown function DUF4154 RY45_RS10150 IPR000160 GGDEF domain RY45_RS10150 IPR003660 HAMP linker domain RY45_RS10150 IPR029787 Nucleotide cyclase RY45_RS10150 IPR033417 RY45_RS10150 RY45_RS10155 IPR006664 Outer membrane protein, bacterial RY45_RS10155 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS10160 IPR005496 Integral membrane protein TerC RY45_RS10165 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RY45_RS10165 IPR011386 Putative ATP-NAD kinase RY45_RS10170 IPR014987 Uncharacterised protein family YfcL RY45_RS10175 IPR000873 AMP-dependent synthetase/ligase RY45_RS10175 IPR020845 AMP-binding, conserved site RY45_RS10180 IPR002125 CMP/dCMP deaminase, zinc-binding RY45_RS10180 IPR006263 Cytidine deaminase, homodimeric RY45_RS10180 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain RY45_RS10180 IPR016192 APOBEC/CMP deaminase, zinc-binding RY45_RS10180 IPR016193 Cytidine deaminase-like RY45_RS10180 IPR020797 Cytidine deaminase, bacteria RY45_RS10185 IPR007300 CidB/LrgB family RY45_RS10190 IPR005538 LrgA/CidA family RY45_RS10195 IPR002252 Glycoside hydrolase, family 36 RY45_RS10195 IPR013785 Aldolase-type TIM barrel RY45_RS10195 IPR017853 Glycoside hydrolase, superfamily RY45_RS10205 IPR012337 Ribonuclease H-like domain RY45_RS10205 IPR013520 Exonuclease, RNase T/DNA polymerase III RY45_RS10205 IPR013620 Exonuclease C-terminal RY45_RS10205 IPR023607 Exodeoxyribonuclease I RY45_RS10210 IPR003762 L-arabinose isomerase RY45_RS10210 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RY45_RS10210 IPR009015 L-fucose isomerase, N-terminal/central domain RY45_RS10210 IPR024664 L-arabinose isomerase, C-terminal RY45_RS10215 IPR001303 Class II aldolase/adducin N-terminal RY45_RS10220 IPR005929 L-ribulokinase RY45_RS10220 IPR018485 Carbohydrate kinase, FGGY, C-terminal RY45_RS10225 IPR001761 Periplasmic binding protein/LacI sugar binding domain RY45_RS10225 IPR026266 L-arabinose-binding periplasmic protein RY45_RS10225 IPR028082 Periplasmic binding protein-like I RY45_RS10230 IPR003439 ABC transporter-like RY45_RS10230 IPR003593 AAA+ ATPase domain RY45_RS10230 IPR017871 ABC transporter, conserved site RY45_RS10230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10235 IPR001851 ABC transporter, permease RY45_RS10240 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS10240 IPR009057 Homeodomain-like RY45_RS10240 IPR018060 DNA binding HTH domain, AraC-type RY45_RS10240 IPR018062 HTH domain AraC-type, conserved site RY45_RS10240 IPR020449 Transcription regulator HTH, AraC- type RY45_RS10245 IPR000847 Transcription regulator HTH, LysR RY45_RS10245 IPR005119 LysR, substrate-binding RY45_RS10245 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10250 IPR003829 Pirin, N-terminal domain RY45_RS10250 IPR008778 Pirin, C-terminal domain RY45_RS10250 IPR011051 RmlC-like cupin domain RY45_RS10250 IPR012093 Pirin RY45_RS10250 IPR014710 RmlC-like jelly roll fold RY45_RS10255 IPR000473 Ribosomal protein L36 RY45_RS10260 IPR002150 Ribosomal protein L31 RY45_RS10260 IPR027493 Ribosomal protein L31 type B RY45_RS10265 IPR010391 DNA damage-inducible protein DinI-like RY45_RS10270 IPR021323 Protein of unknown function DUF2927 RY45_RS10275 IPR002725 Protein of unknown function DUF45 RY45_RS10285 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS10285 IPR006146 5'-Nucleotidase, conserved site RY45_RS10285 IPR006179 5'-Nucleotidase/apyrase RY45_RS10285 IPR008334 5'-Nucleotidase, C-terminal RY45_RS10285 IPR029052 Metallo-dependent phosphatase-like RY45_RS10290 IPR004669 C4-dicarboxylate anaerobic carrier RY45_RS10290 IPR018385 C4-dicarboxylate anaerobic carrier-like RY45_RS10295 IPR010321 Protein of unknown function DUF922 RY45_RS10300 IPR006076 FAD dependent oxidoreductase RY45_RS10300 IPR008471 MnmC-like methyltransferase RY45_RS10300 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal RY45_RS10300 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC RY45_RS10300 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS10305 IPR014030 Beta-ketoacyl synthase, N-terminal RY45_RS10305 IPR014031 Beta-ketoacyl synthase, C-terminal RY45_RS10305 IPR016039 Thiolase-like RY45_RS10305 IPR018201 Beta-ketoacyl synthase, active site RY45_RS10305 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RY45_RS10310 IPR000182 GNAT domain RY45_RS10310 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10315 IPR025485 Domain of unknown function DUF4377 RY45_RS10320 IPR002020 Citrate synthase-like RY45_RS10320 IPR010953 Citrate synthase, type I RY45_RS10320 IPR016142 Citrate synthase-like, large alpha subdomain RY45_RS10320 IPR016143 Citrate synthase-like, small alpha subdomain RY45_RS10320 IPR019810 Citrate synthase active site RY45_RS10320 IPR024176 Citrate synthase, bacterial-type RY45_RS10325 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RY45_RS10325 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RY45_RS10325 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site RY45_RS10330 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RY45_RS10330 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RY45_RS10335 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RY45_RS10335 IPR003953 FAD binding domain RY45_RS10335 IPR011281 Succinate dehydrogenase, flavoprotein subunit RY45_RS10335 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RY45_RS10335 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RY45_RS10335 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10335 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RY45_RS10335 IPR030664 RY45_RS10335 RY45_RS10340 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS10340 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RY45_RS10340 IPR009051 Alpha-helical ferredoxin RY45_RS10340 IPR012675 Beta-grasp domain RY45_RS10340 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS10340 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RY45_RS10345 IPR001017 Dehydrogenase, E1 component RY45_RS10345 IPR005475 Transketolase-like, pyrimidine-binding domain RY45_RS10345 IPR011603 2-oxoglutarate dehydrogenase E1 component RY45_RS10345 IPR029061 Thiamin diphosphate-binding fold RY45_RS10345 IPR031717 RY45_RS10345 RY45_RS10345 IPR032106 RY45_RS10345 RY45_RS10350 IPR000089 Biotin/lipoyl attachment RY45_RS10350 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RY45_RS10350 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RY45_RS10350 IPR004167 E3 binding RY45_RS10350 IPR006255 Dihydrolipoamide succinyltransferase RY45_RS10350 IPR011053 Single hybrid motif RY45_RS10350 IPR023213 Chloramphenicol acetyltransferase-like domain RY45_RS10355 IPR005809 Succinyl-CoA synthetase, beta subunit RY45_RS10355 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RY45_RS10355 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RY45_RS10355 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS10355 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS10355 IPR016102 Succinyl-CoA synthetase-like RY45_RS10355 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RY45_RS10360 IPR003781 CoA-binding RY45_RS10360 IPR005810 Succinyl-CoA ligase, alpha subunit RY45_RS10360 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RY45_RS10360 IPR016040 NAD(P)-binding domain RY45_RS10360 IPR016102 Succinyl-CoA synthetase-like RY45_RS10360 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RY45_RS10370 IPR005358 Putative zinc- or iron-chelating domain containing protein RY45_RS10370 IPR008228 Uncharacterised conserved protein UCP006173 RY45_RS10375 IPR006076 FAD dependent oxidoreductase RY45_RS10375 IPR017715 Putative aminophosphonate oxidoreductase RY45_RS10375 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10380 IPR000515 MetI-like domain RY45_RS10380 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative RY45_RS10385 IPR003439 ABC transporter-like RY45_RS10385 IPR003593 AAA+ ATPase domain RY45_RS10385 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS10385 IPR013611 Transport-associated OB, type 2 RY45_RS10385 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 RY45_RS10385 IPR017871 ABC transporter, conserved site RY45_RS10385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10390 IPR026045 Ferric binding protein RY45_RS10395 IPR000524 Transcription regulator HTH, GntR RY45_RS10395 IPR011663 UbiC transcription regulator-associated RY45_RS10395 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10395 IPR017722 Transcription regulator PhnR RY45_RS10395 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RY45_RS10400 IPR000192 Aminotransferase class V domain RY45_RS10400 IPR012703 2-aminoethylphosphonate--pyruvate transaminase RY45_RS10400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS10400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS10400 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS10400 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase RY45_RS10405 IPR005814 Aminotransferase class-III RY45_RS10405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS10405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS10405 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS10410 IPR006323 Phosphonoacetaldehyde hydrolase RY45_RS10410 IPR006439 HAD hydrolase, subfamily IA RY45_RS10410 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS10410 IPR023214 HAD-like domain RY45_RS10415 IPR001150 Glycine radical domain RY45_RS10415 IPR004184 Pyruvate formate lyase domain RY45_RS10415 IPR005949 Formate acetyltransferase RY45_RS10415 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RY45_RS10420 IPR000292 Formate/nitrite transporter RY45_RS10420 IPR023271 Aquaporin-like RY45_RS10420 IPR023999 Formate transporter FocA, putative RY45_RS10420 IPR024002 Formate/nitrite transporter, conserved site RY45_RS10425 IPR003776 YcaO-like domain RY45_RS10430 IPR000390 Small multidrug resistance protein family RY45_RS10435 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RY45_RS10435 IPR000534 Semialdehyde dehydrogenase, NAD-binding RY45_RS10435 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RY45_RS10435 IPR012080 Aspartate-semialdehyde dehydrogenase RY45_RS10435 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RY45_RS10435 IPR016040 NAD(P)-binding domain RY45_RS10440 IPR007863 Peptidase M16, C-terminal domain RY45_RS10440 IPR011237 Peptidase M16 domain RY45_RS10440 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RY45_RS10440 IPR011765 Peptidase M16, N-terminal RY45_RS10445 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RY45_RS10445 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS10445 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS10445 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS10450 IPR002283 Isopenicillin N synthase RY45_RS10450 IPR005123 Oxoglutarate/iron-dependent dioxygenase RY45_RS10450 IPR026992 Non-haem dioxygenase N-terminal domain RY45_RS10450 IPR027443 Isopenicillin N synthase-like RY45_RS10455 IPR016040 NAD(P)-binding domain RY45_RS10460 IPR000847 Transcription regulator HTH, LysR RY45_RS10460 IPR005119 LysR, substrate-binding RY45_RS10460 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10465 IPR002347 Glucose/ribitol dehydrogenase RY45_RS10465 IPR011283 Acetoacetyl-CoA reductase RY45_RS10465 IPR016040 NAD(P)-binding domain RY45_RS10465 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS10470 IPR009057 Homeodomain-like RY45_RS10470 IPR010499 Bacterial transcription activator, effector binding RY45_RS10470 IPR011256 Regulatory factor, effector binding domain RY45_RS10470 IPR018060 DNA binding HTH domain, AraC-type RY45_RS10470 IPR018062 HTH domain AraC-type, conserved site RY45_RS10470 IPR020449 Transcription regulator HTH, AraC- type RY45_RS10470 IPR029442 GyrI-like small molecule binding domain RY45_RS10475 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS10475 IPR010105 TonB-dependent siderophore receptor RY45_RS10475 IPR010916 TonB box, conserved site RY45_RS10475 IPR012910 TonB-dependent receptor, plug RY45_RS10480 IPR024726 Ferric iron reductase, C-terminal RY45_RS10485 IPR000847 Transcription regulator HTH, LysR RY45_RS10485 IPR005119 LysR, substrate-binding RY45_RS10485 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10490 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RY45_RS10490 IPR006276 Cobalamin-independent methionine synthase RY45_RS10490 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RY45_RS10495 IPR002201 Glycosyl transferase, family 9 RY45_RS10500 IPR000644 CBS domain RY45_RS10500 IPR007065 HPP RY45_RS10505 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS10505 IPR013108 Amidohydrolase 3 RY45_RS10505 IPR032466 RY45_RS10505 RY45_RS10510 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS10510 IPR009057 Homeodomain-like RY45_RS10510 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS10515 IPR006076 FAD dependent oxidoreductase RY45_RS10515 IPR023080 D-amino acid dehydrogenase small subunit, DadA RY45_RS10515 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10520 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal RY45_RS10520 IPR007357 Deoxyribodipyrimidine photolyase-related protein RY45_RS10525 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RY45_RS10525 IPR011166 Beta-eliminating lyase family RY45_RS10525 IPR013440 Tryptophanase RY45_RS10525 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS10525 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS10530 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RY45_RS10530 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS10530 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RY45_RS10535 IPR000086 NUDIX hydrolase domain RY45_RS10535 IPR015797 NUDIX hydrolase domain-like RY45_RS10535 IPR020084 NUDIX hydrolase, conserved site RY45_RS10540 IPR005616 Cytochrome C biogenesis protein CcmH RY45_RS10540 IPR011990 Tetratricopeptide-like helical domain RY45_RS10540 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF RY45_RS10545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RY45_RS10545 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE RY45_RS10545 IPR012336 Thioredoxin-like fold RY45_RS10550 IPR002541 Cytochrome c assembly protein RY45_RS10550 IPR003567 Cytochrome c-type biogenesis protein RY45_RS10550 IPR003568 Cytochrome c-type biogenesis protein CcmF RY45_RS10550 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE RY45_RS10550 IPR032523 RY45_RS10550 RY45_RS10555 IPR005614 NrfD family RY45_RS10555 IPR017566 NrfD RY45_RS10560 IPR017567 Cytochrome c nitrite reductase, Fe-S protein RY45_RS10560 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS10560 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS10565 IPR010177 Doubled CXXCH motif RY45_RS10565 IPR011031 Multihaem cytochrome RY45_RS10565 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit RY45_RS10565 IPR023155 Cytochrome c-552/4 RY45_RS10570 IPR003321 Cytochrome c552 RY45_RS10570 IPR011031 Multihaem cytochrome RY45_RS10570 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit RY45_RS10570 IPR023155 Cytochrome c-552/4 RY45_RS10575 IPR011049 Serralysin-like metalloprotease, C-terminal RY45_RS10575 IPR018511 Hemolysin-type calcium-binding conserved site RY45_RS10580 IPR004017 Cysteine-rich domain RY45_RS10580 IPR009051 Alpha-helical ferredoxin RY45_RS10580 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit RY45_RS10580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS10580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS10585 IPR001613 Flavin amine oxidase RY45_RS10585 IPR003953 FAD binding domain RY45_RS10585 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit RY45_RS10585 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10590 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RY45_RS10590 IPR006076 FAD dependent oxidoreductase RY45_RS10590 IPR007419 BFD-like [2Fe-2S]-binding domain RY45_RS10590 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit RY45_RS10590 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS10595 IPR004027 SEC-C motif RY45_RS10595 IPR032710 RY45_RS10595 RY45_RS10600 IPR003660 HAMP linker domain RY45_RS10600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS10600 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS10600 IPR033480 RY45_RS10600 RY45_RS10605 IPR000600 ROK RY45_RS10605 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10610 IPR000014 PAS domain RY45_RS10610 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS10610 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS10610 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB RY45_RS10610 IPR029151 Periplasmic sensor domain-like RY45_RS10610 IPR033463 RY45_RS10610 RY45_RS10615 IPR001789 Signal transduction response regulator, receiver domain RY45_RS10615 IPR011006 CheY-like superfamily RY45_RS10615 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10615 IPR024187 Signal transduction response regulator, citrate/malate metabolism RY45_RS10615 IPR028141 Transcriptional regulator RY45_RS10620 IPR002823 Protein of unknown function DUF112, transmembrane RY45_RS10625 IPR009936 Protein of unknown function DUF1468 RY45_RS10630 IPR005064 Bordetella uptake gene RY45_RS10635 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS10635 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS10635 IPR023346 Lysozyme-like domain RY45_RS10640 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS10640 IPR006512 YidE/YbjL duplication RY45_RS10640 IPR023017 Transport protein YbjL, putative RY45_RS10650 IPR001650 Helicase, C-terminal RY45_RS10650 IPR001943 UVR domain RY45_RS10650 IPR004807 UvrABC system, subunit B RY45_RS10650 IPR006935 Helicase/UvrB domain RY45_RS10650 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS10650 IPR024759 UvrB, YAD/RRR-motif-containing domain RY45_RS10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10655 IPR010652 Protein of unknown function DUF1232 RY45_RS10660 IPR032816 RY45_RS10660 RY45_RS10660 IPR032818 RY45_RS10660 RY45_RS10665 IPR003752 Disulphide bond formation protein DsbB/BdbC RY45_RS10665 IPR022920 Disulphide bond formation protein DsbB RY45_RS10665 IPR023380 Disulphide bond formation protein DsbB-like domain RY45_RS10670 IPR004671 Na+/H+ antiporter NhaB RY45_RS10675 IPR000524 Transcription regulator HTH, GntR RY45_RS10675 IPR008920 Transcription regulator FadR/GntR, C-terminal RY45_RS10675 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10675 IPR014178 Fatty acid response transcription factor FadR RY45_RS10675 IPR028374 FadR, C-terminal domain RY45_RS10680 IPR007390 Sporulation stage V, protein R RY45_RS10685 IPR002035 von Willebrand factor, type A RY45_RS10685 IPR006698 Thermus phage phiYS40, Orf56 RY45_RS10690 IPR010650 PrkA C-terminal domain RY45_RS10690 IPR013153 PrkA AAA domain RY45_RS10690 IPR016230 Serine-protein kinase, PrkA RY45_RS10690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10695 IPR001650 Helicase, C-terminal RY45_RS10695 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site RY45_RS10695 IPR004589 DNA helicase, ATP-dependent, RecQ type RY45_RS10695 IPR011545 DEAD/DEAH box helicase domain RY45_RS10695 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10695 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS10695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10695 IPR032284 RY45_RS10695 RY45_RS10700 IPR001991 Sodium:dicarboxylate symporter RY45_RS10700 IPR023025 Serine/threonine transporter SstT RY45_RS10705 IPR004694 Hydroxy amino acid transporter RY45_RS10705 IPR018227 Tryptophan/tyrosine permease RY45_RS10710 IPR000059 NUDIX hydrolase, NudL, conserved site RY45_RS10710 IPR000086 NUDIX hydrolase domain RY45_RS10710 IPR015797 NUDIX hydrolase domain-like RY45_RS10715 IPR005801 ADC synthase RY45_RS10715 IPR005802 Para-aminobenzoate synthase, component I RY45_RS10715 IPR006805 Anthranilate synthase component I, N-terminal RY45_RS10715 IPR015890 Chorismate binding, C-terminal RY45_RS10715 IPR019999 Anthranilate synthase component I - like RY45_RS10720 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain RY45_RS10720 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain RY45_RS10720 IPR011167 Iron-dependent fumarate hydratase RY45_RS10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10730 IPR025346 Protein of unknown function DUF4250 RY45_RS10740 IPR000811 Glycosyl transferase, family 35 RY45_RS10740 IPR011833 Glycogen/starch/alpha-glucan phosphorylase RY45_RS10745 IPR001898 Sodium/sulphate symporter RY45_RS10745 IPR031312 RY45_RS10745 RY45_RS10750 IPR005746 Thioredoxin RY45_RS10750 IPR012336 Thioredoxin-like fold RY45_RS10750 IPR013766 Thioredoxin domain RY45_RS10750 IPR017937 Thioredoxin, conserved site RY45_RS10755 IPR001789 Signal transduction response regulator, receiver domain RY45_RS10755 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS10755 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS10755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS10755 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS10755 IPR011006 CheY-like superfamily RY45_RS10760 IPR003439 ABC transporter-like RY45_RS10760 IPR003593 AAA+ ATPase domain RY45_RS10760 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS10760 IPR017871 ABC transporter, conserved site RY45_RS10760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10765 IPR003439 ABC transporter-like RY45_RS10765 IPR003593 AAA+ ATPase domain RY45_RS10765 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS10765 IPR017871 ABC transporter, conserved site RY45_RS10765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10770 IPR027961 Protein of unknown function DUF4442 RY45_RS10770 IPR029069 HotDog domain RY45_RS10775 IPR002942 RNA-binding S4 domain RY45_RS10780 IPR002539 MaoC-like domain RY45_RS10780 IPR003965 Fatty acid synthase RY45_RS10780 IPR029069 HotDog domain RY45_RS10785 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain RY45_RS10785 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I RY45_RS10785 IPR029058 Alpha/Beta hydrolase fold RY45_RS10790 IPR014176 Phasin, subfamily 3 RY45_RS10790 IPR018968 Phasin RY45_RS10800 IPR007362 Protein of unknown function DUF429 RY45_RS10805 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase RY45_RS10805 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RY45_RS10805 IPR023685 Pyridoxal kinase PdxY RY45_RS10805 IPR029056 Ribokinase-like RY45_RS10810 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RY45_RS10810 IPR011008 Dimeric alpha-beta barrel RY45_RS10815 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS10815 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS10820 IPR000182 GNAT domain RY45_RS10820 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10825 IPR000086 NUDIX hydrolase domain RY45_RS10825 IPR015797 NUDIX hydrolase domain-like RY45_RS10830 IPR023577 CYTH-like domain RY45_RS10830 IPR033469 RY45_RS10830 RY45_RS10840 IPR003844 Uncharacterised protein family UPF0060 RY45_RS10845 IPR000182 GNAT domain RY45_RS10845 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10850 IPR000182 GNAT domain RY45_RS10850 IPR016181 Acyl-CoA N-acyltransferase RY45_RS10855 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS10855 IPR001650 Helicase, C-terminal RY45_RS10855 IPR011545 DEAD/DEAH box helicase domain RY45_RS10855 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10860 IPR000889 Glutathione peroxidase RY45_RS10860 IPR012336 Thioredoxin-like fold RY45_RS10860 IPR029759 Glutathione peroxidase active site RY45_RS10865 IPR005123 Oxoglutarate/iron-dependent dioxygenase RY45_RS10865 IPR006620 Prolyl 4-hydroxylase, alpha subunit RY45_RS10870 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RY45_RS10870 IPR005905 D-alanine--D-alanine ligase RY45_RS10870 IPR011095 D-alanine--D-alanine ligase, C-terminal RY45_RS10870 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RY45_RS10870 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS10870 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS10870 IPR016185 Pre-ATP-grasp domain RY45_RS10875 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS10875 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS10880 IPR005636 DTW RY45_RS10885 IPR002781 Transmembrane protein TauE like RY45_RS10890 IPR000847 Transcription regulator HTH, LysR RY45_RS10890 IPR005119 LysR, substrate-binding RY45_RS10890 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10895 IPR000620 Drug/metabolite transporter RY45_RS10900 IPR009057 Homeodomain-like RY45_RS10900 IPR018060 DNA binding HTH domain, AraC-type RY45_RS10900 IPR018062 HTH domain AraC-type, conserved site RY45_RS10905 IPR022602 Protein of unknown function DUF2813 RY45_RS10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10915 IPR004193 Glycoside hydrolase, family 13, N-terminal RY45_RS10915 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS10915 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS10915 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS10915 IPR013783 Immunoglobulin-like fold RY45_RS10915 IPR014756 Immunoglobulin E-set RY45_RS10915 IPR015902 Glycoside hydrolase, family 13 RY45_RS10915 IPR017853 Glycoside hydrolase, superfamily RY45_RS10945 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RY45_RS10945 IPR011356 Leucine aminopeptidase/peptidase B RY45_RS10950 IPR006439 HAD hydrolase, subfamily IA RY45_RS10950 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB RY45_RS10950 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS10950 IPR023214 HAD-like domain RY45_RS10955 IPR002933 Peptidase M20 RY45_RS10955 IPR011650 Peptidase M20, dimerisation domain RY45_RS10955 IPR017439 Amidohydrolase RY45_RS10960 IPR000023 Phosphofructokinase domain RY45_RS10960 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type RY45_RS10960 IPR012828 6-phosphofructokinase RY45_RS10960 IPR015912 Phosphofructokinase, conserved site RY45_RS10960 IPR022953 Phosphofructokinase RY45_RS10965 IPR000652 Triosephosphate isomerase RY45_RS10965 IPR013785 Aldolase-type TIM barrel RY45_RS10965 IPR020861 Triosephosphate isomerase, active site RY45_RS10965 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RY45_RS10970 IPR003848 Domain of unknown function DUF218 RY45_RS10970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS10975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS10980 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS10980 IPR033439 RY45_RS10980 RY45_RS10980 IPR033440 RY45_RS10980 RY45_RS10980 IPR033441 RY45_RS10980 RY45_RS10985 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE RY45_RS10990 IPR007406 MukB, N-terminal domain RY45_RS10990 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS10990 IPR032520 RY45_RS10990 RY45_RS10995 IPR009009 RlpA-like double-psi beta-barrel domain RY45_RS10995 IPR012997 Rare lipoprotein A, bacterial RY45_RS11000 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RY45_RS11000 IPR011008 Dimeric alpha-beta barrel RY45_RS11005 IPR000182 GNAT domain RY45_RS11005 IPR016181 Acyl-CoA N-acyltransferase RY45_RS11010 IPR000181 Formylmethionine deformylase RY45_RS11010 IPR023635 Peptide deformylase RY45_RS11015 IPR002818 ThiJ/PfpI RY45_RS11015 IPR029062 Class I glutamine amidotransferase-like RY45_RS11020 IPR000182 GNAT domain RY45_RS11020 IPR016181 Acyl-CoA N-acyltransferase RY45_RS11025 IPR000182 GNAT domain RY45_RS11025 IPR016181 Acyl-CoA N-acyltransferase RY45_RS11040 IPR003719 Phenazine biosynthesis PhzF protein RY45_RS11045 IPR012908 GPI inositol-deacylase PGAP1-like RY45_RS11045 IPR029058 Alpha/Beta hydrolase fold RY45_RS11050 IPR013988 PhnA protein, C-terminal RY45_RS11050 IPR013991 PhnA protein N-terminal, proteobacterial RY45_RS11055 IPR025714 Methyltransferase domain RY45_RS11055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11060 IPR000726 Glycoside hydrolase, family 19, catalytic RY45_RS11060 IPR003610 Carbohydrate-binding module family 5/12 RY45_RS11060 IPR023346 Lysozyme-like domain RY45_RS11065 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS11065 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS11070 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RY45_RS11070 IPR011057 Mss4-like RY45_RS11075 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RY45_RS11075 IPR013078 Histidine phosphatase superfamily, clade-1 RY45_RS11075 IPR029033 Histidine phosphatase superfamily RY45_RS11080 IPR000014 PAS domain RY45_RS11080 IPR000160 GGDEF domain RY45_RS11080 IPR013656 PAS fold-4 RY45_RS11080 IPR029787 Nucleotide cyclase RY45_RS11085 IPR013538 Activator of Hsp90 ATPase homologue 1-like RY45_RS11085 IPR023393 START-like domain RY45_RS11090 IPR002625 Smr protein/MutS2 C-terminal RY45_RS11090 IPR022990 Uncharacterised protein family UPF0115 RY45_RS11095 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS11095 IPR004556 Modification methylase HemK RY45_RS11095 IPR007848 Methyltransferase small domain RY45_RS11095 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RY45_RS11095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11100 IPR000453 Chorismate synthase RY45_RS11100 IPR020541 Chorismate synthase, conserved site RY45_RS11105 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS11110 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS11110 IPR001650 Helicase, C-terminal RY45_RS11110 IPR011545 DEAD/DEAH box helicase domain RY45_RS11110 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS11110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11110 IPR028622 ATP-dependent RNA helicase RhlE RY45_RS11115 IPR014914 RES RY45_RS11120 IPR020358 Uncharacterised protein family Y4oB RY45_RS11120 IPR024467 Domain of unknown function DUF2384 RY45_RS11125 IPR002091 Aromatic amino acid permease RY45_RS11125 IPR013059 Tryptophan/tyrosine transporter RY45_RS11125 IPR018227 Tryptophan/tyrosine permease RY45_RS11130 IPR000843 Transcription regulator HTH, LacI RY45_RS11130 IPR001761 Periplasmic binding protein/LacI sugar binding domain RY45_RS11130 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS11130 IPR012781 D-fructose-responsive transcription factor RY45_RS11130 IPR028082 Periplasmic binding protein-like I RY45_RS11135 IPR000032 Phosphocarrier HPr protein-like RY45_RS11135 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RY45_RS11135 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RY45_RS11135 IPR002178 PTS EIIA type-2 domain RY45_RS11135 IPR016152 Phosphotransferase/anion transporter RY45_RS11140 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RY45_RS11140 IPR011611 Carbohydrate kinase PfkB RY45_RS11140 IPR017583 Tagatose/fructose phosphokinase RY45_RS11140 IPR022463 Fructose 1-phosphate kinase RY45_RS11140 IPR029056 Ribokinase-like RY45_RS11145 IPR003352 Phosphotransferase system, EIIC RY45_RS11145 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RY45_RS11145 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RY45_RS11145 IPR006327 Phosphotransferase system, fructose IIC component RY45_RS11150 IPR010551 Glucose-6-phosphate isomerase, prokaryote RY45_RS11150 IPR011051 RmlC-like cupin domain RY45_RS11150 IPR014710 RmlC-like jelly roll fold RY45_RS11155 IPR000843 Transcription regulator HTH, LacI RY45_RS11155 IPR001761 Periplasmic binding protein/LacI sugar binding domain RY45_RS11155 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS11155 IPR028082 Periplasmic binding protein-like I RY45_RS11160 IPR011051 RmlC-like cupin domain RY45_RS11160 IPR014710 RmlC-like jelly roll fold RY45_RS11160 IPR016847 Mannose-6-phosphate isomerase, Firmicutes, long form, predicted RY45_RS11165 IPR004701 Phosphotransferase system, mannose-type IIA component RY45_RS11170 IPR004720 Phosphotransferase system, sorbose subfamily IIB component RY45_RS11175 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit RY45_RS11180 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component RY45_RS11185 IPR008928 Six-hairpin glycosidase-like RY45_RS11185 IPR012341 Six-hairpin glycosidase RY45_RS11190 IPR010710 Protein of unknown function DUF1289 RY45_RS11195 IPR005300 Lytic transglycosylase MltA RY45_RS11195 IPR009009 RlpA-like double-psi beta-barrel domain RY45_RS11195 IPR010611 3D domain RY45_RS11200 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS11200 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RY45_RS11200 IPR012675 Beta-grasp domain RY45_RS11205 IPR000358 Ribonucleotide reductase small subunit RY45_RS11205 IPR009078 Ferritin-like superfamily RY45_RS11205 IPR012348 Ribonucleotide reductase-related RY45_RS11205 IPR030475 RY45_RS11205 RY45_RS11210 IPR000788 Ribonucleotide reductase large subunit, C-terminal RY45_RS11210 IPR005144 ATP-cone RY45_RS11210 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RY45_RS11210 IPR013346 Ribonucleotide reductase, class I , alpha subunit RY45_RS11210 IPR013509 Ribonucleotide reductase large subunit, N-terminal RY45_RS11215 IPR006439 HAD hydrolase, subfamily IA RY45_RS11215 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS11215 IPR023214 HAD-like domain RY45_RS11220 IPR010233 Ubiquinone biosynthesis O-methyltransferase RY45_RS11220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11225 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RY45_RS11225 IPR005743 DNA gyrase, subunit A RY45_RS11225 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RY45_RS11225 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RY45_RS11225 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RY45_RS11225 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS11225 IPR024946 Arginine repressor C-terminal-like domain RY45_RS11230 IPR007197 Radical SAM RY45_RS11230 IPR013785 Aldolase-type TIM barrel RY45_RS11235 IPR006597 Sel1-like RY45_RS11235 IPR011990 Tetratricopeptide-like helical domain RY45_RS11240 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RY45_RS11240 IPR002320 Threonine-tRNA ligase, class IIa RY45_RS11240 IPR004095 TGS RY45_RS11240 IPR004154 Anticodon-binding RY45_RS11240 IPR012675 Beta-grasp domain RY45_RS11240 IPR012676 TGS-like RY45_RS11240 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RY45_RS11240 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RY45_RS11245 IPR001288 Translation initiation factor 3 RY45_RS11245 IPR019813 Translation initiation factor 3, conserved site RY45_RS11245 IPR019814 Translation initiation factor 3, N-terminal RY45_RS11245 IPR019815 Translation initiation factor 3, C-terminal RY45_RS11250 IPR001706 Ribosomal protein L35, non-mitochondrial RY45_RS11250 IPR018265 Ribosomal protein L35, conserved site RY45_RS11250 IPR021137 Ribosomal protein L35 RY45_RS11255 IPR005813 Ribosomal protein L20 RY45_RS11260 IPR002319 Phenylalanyl-tRNA synthetase RY45_RS11260 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RY45_RS11260 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RY45_RS11260 IPR010978 tRNA-binding arm RY45_RS11260 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RY45_RS11265 IPR002547 tRNA-binding domain RY45_RS11265 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RY45_RS11265 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RY45_RS11265 IPR005146 B3/B4 tRNA-binding domain RY45_RS11265 IPR005147 tRNA synthetase, B5-domain RY45_RS11265 IPR009061 DNA binding domain, putative RY45_RS11265 IPR012340 Nucleic acid-binding, OB-fold RY45_RS11265 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RY45_RS11270 IPR000119 Histone-like bacterial DNA-binding protein RY45_RS11270 IPR005684 Integration host factor, alpha subunit RY45_RS11270 IPR010992 Integration host factor (IHF)-like DNA-binding domain RY45_RS11270 IPR020816 Histone-like DNA-binding protein, conserved site RY45_RS11280 IPR001789 Signal transduction response regulator, receiver domain RY45_RS11280 IPR011006 CheY-like superfamily RY45_RS11285 IPR000182 GNAT domain RY45_RS11285 IPR016181 Acyl-CoA N-acyltransferase RY45_RS11290 IPR003000 Sirtuin family RY45_RS11290 IPR026591 Sirtuin family, catalytic core small domain RY45_RS11290 IPR027546 Sirtuin, class III RY45_RS11290 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS11295 IPR000572 Oxidoreductase, molybdopterin-binding domain RY45_RS11300 IPR000160 GGDEF domain RY45_RS11300 IPR029787 Nucleotide cyclase RY45_RS11305 IPR000843 Transcription regulator HTH, LacI RY45_RS11305 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS11305 IPR028082 Periplasmic binding protein-like I RY45_RS11310 IPR002139 Ribokinase RY45_RS11310 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RY45_RS11310 IPR011611 Carbohydrate kinase PfkB RY45_RS11310 IPR011877 Ribokinase, bacterial RY45_RS11310 IPR029056 Ribokinase-like RY45_RS11315 IPR025997 Periplasmic binding protein domain RY45_RS11315 IPR028082 Periplasmic binding protein-like I RY45_RS11320 IPR001851 ABC transporter, permease RY45_RS11325 IPR003439 ABC transporter-like RY45_RS11325 IPR003593 AAA+ ATPase domain RY45_RS11325 IPR017871 ABC transporter, conserved site RY45_RS11325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11330 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU RY45_RS11330 IPR023064 D-ribose pyranase RY45_RS11330 IPR023750 RbsD-like domain RY45_RS11335 IPR004045 Glutathione S-transferase, N-terminal RY45_RS11335 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS11335 IPR012336 Thioredoxin-like fold RY45_RS11345 IPR021370 Protein of unknown function DUF2987 RY45_RS11350 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RY45_RS11350 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA RY45_RS11350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS11355 IPR006016 UspA RY45_RS11355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS11360 IPR000595 Cyclic nucleotide-binding domain RY45_RS11360 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS11360 IPR012318 Helix-turn-helix motif, Crp-type RY45_RS11360 IPR014710 RmlC-like jelly roll fold RY45_RS11360 IPR018335 Transcription regulator HTH, Crp-type, conserved site RY45_RS11360 IPR018490 Cyclic nucleotide-binding-like RY45_RS11370 IPR004714 Cytochrome oxidase maturation protein cbb3-type RY45_RS11375 IPR006121 Heavy metal-associated domain, HMA RY45_RS11375 IPR008250 P-type ATPase, A domain RY45_RS11375 IPR018303 P-type ATPase, phosphorylation site RY45_RS11375 IPR021993 Putative metal-binding domain of cation transport ATPase RY45_RS11375 IPR023214 HAD-like domain RY45_RS11375 IPR023299 P-type ATPase, cytoplasmic domain N RY45_RS11380 IPR008620 FixH RY45_RS11385 IPR004678 Cytochrome c oxidase cbb3-type, subunit III RY45_RS11385 IPR008168 Cytochrome c, class IC RY45_RS11385 IPR009056 Cytochrome c-like domain RY45_RS11385 IPR032858 RY45_RS11385 RY45_RS11390 IPR008621 Cbb3-type cytochrome oxidase component RY45_RS11395 IPR000883 Cytochrome c oxidase subunit I RY45_RS11395 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RY45_RS11395 IPR009056 Cytochrome c-like domain RY45_RS11400 IPR000883 Cytochrome c oxidase subunit I RY45_RS11400 IPR004677 Cytochrome c oxidase cbb3-type, subunit I RY45_RS11400 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RY45_RS11400 IPR023616 Cytochrome c oxidase, subunit I domain RY45_RS11410 IPR003018 GAF domain RY45_RS11410 IPR029016 GAF domain-like RY45_RS11415 IPR016103 ProQ/FinO domain RY45_RS11415 IPR023529 Transporter ProP effector, ProQ RY45_RS11420 IPR001478 PDZ domain RY45_RS11420 IPR004447 C-terminal-processing peptidase S41A RY45_RS11420 IPR005151 Tail specific protease RY45_RS11420 IPR020992 Tail specific protease, C-terminal RY45_RS11420 IPR029045 ClpP/crotonase-like domain RY45_RS11425 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RY45_RS11425 IPR012779 Peptidase M1, alanyl aminopeptidase RY45_RS11425 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RY45_RS11425 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RY45_RS11430 IPR021363 Protein of unknown function DUF2835 RY45_RS11435 IPR007780 Bacterial NAD-glutamate dehydrogenase RY45_RS11435 IPR016040 NAD(P)-binding domain RY45_RS11435 IPR028971 NAD-glutamate dehydrogenase RY45_RS11440 IPR001295 Dihydroorotate dehydrogenase, conserved site RY45_RS11440 IPR005719 Dihydroorotate dehydrogenase, class 2 RY45_RS11440 IPR005720 Dihydroorotate dehydrogenase domain RY45_RS11440 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RY45_RS11440 IPR013785 Aldolase-type TIM barrel RY45_RS11445 IPR009809 Cell division protein ZapC RY45_RS11450 IPR000241 Putative RNA methylase domain RY45_RS11450 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS11450 IPR004114 THUMP RY45_RS11450 IPR017244 Ribosomal RNA large subunit methyltransferase K/L RY45_RS11450 IPR019614 S-adenosylmethionine-dependent methyltransferase RY45_RS11450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11455 IPR008554 Glutaredoxin-like RY45_RS11455 IPR012336 Thioredoxin-like fold RY45_RS11460 IPR003439 ABC transporter-like RY45_RS11460 IPR003593 AAA+ ATPase domain RY45_RS11460 IPR017871 ABC transporter, conserved site RY45_RS11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11460 IPR032524 RY45_RS11460 RY45_RS11460 IPR032781 RY45_RS11460 RY45_RS11465 IPR020008 GlyGly-CTERM domain RY45_RS11465 IPR022562 Protein of unknown function DUF3466 RY45_RS11470 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA RY45_RS11470 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RY45_RS11470 IPR029069 HotDog domain RY45_RS11475 IPR008269 Peptidase S16, Lon C-terminal RY45_RS11475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS11475 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS11475 IPR027065 Lon protease RY45_RS11475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11480 IPR002104 Integrase, catalytic RY45_RS11480 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS11480 IPR013762 Integrase-like, catalytic core RY45_RS11480 IPR023109 Integrase/recombinase, N-terminal RY45_RS11485 IPR009813 Uncharacterised protein family YebG RY45_RS11490 IPR012908 GPI inositol-deacylase PGAP1-like RY45_RS11490 IPR029058 Alpha/Beta hydrolase fold RY45_RS11495 IPR002347 Glucose/ribitol dehydrogenase RY45_RS11495 IPR013120 Male sterility, NAD-binding RY45_RS11495 IPR016040 NAD(P)-binding domain RY45_RS11495 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS11500 IPR008769 Poly granule associated RY45_RS11505 IPR002641 Patatin/Phospholipase A2-related RY45_RS11505 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS11510 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS11510 IPR009057 Homeodomain-like RY45_RS11510 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS11510 IPR025722 Bacterial transcriptional repressor TetR RY45_RS11515 IPR011990 Tetratricopeptide-like helical domain RY45_RS11520 IPR004255 O-acyltransferase, WSD1, N-terminal RY45_RS11520 IPR009721 O-acyltransferase, WSD1, C-terminal RY45_RS11520 IPR023213 Chloramphenicol acetyltransferase-like domain RY45_RS11525 IPR013433 Putative polyhydroxyalkanoic acid system protein RY45_RS11535 IPR005656 MmgE/PrpD RY45_RS11535 IPR012705 2-methylcitrate dehydratase PrpD RY45_RS11540 IPR002020 Citrate synthase-like RY45_RS11540 IPR011278 2-methylcitrate synthase/citrate synthase type I RY45_RS11540 IPR016142 Citrate synthase-like, large alpha subdomain RY45_RS11540 IPR016143 Citrate synthase-like, small alpha subdomain RY45_RS11540 IPR019810 Citrate synthase active site RY45_RS11540 IPR024176 Citrate synthase, bacterial-type RY45_RS11545 IPR012695 Methylisocitrate lyase RY45_RS11545 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS11545 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RY45_RS11550 IPR007498 Paraquat-inducible protein A RY45_RS11555 IPR007498 Paraquat-inducible protein A RY45_RS11560 IPR003399 Mammalian cell entry-related RY45_RS11565 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RY45_RS11565 IPR011023 Nop2p RY45_RS11565 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RY45_RS11565 IPR023267 RNA (C5-cytosine) methyltransferase RY45_RS11565 IPR023545 rRNA small subunit methyltransferase F RY45_RS11565 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain RY45_RS11565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11565 IPR031341 RY45_RS11565 RY45_RS11575 IPR002104 Integrase, catalytic RY45_RS11575 IPR010998 Integrase, Lambda-type, N-terminal RY45_RS11575 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS11575 IPR013762 Integrase-like, catalytic core RY45_RS11575 IPR023109 Integrase/recombinase, N-terminal RY45_RS11580 IPR001130 TatD family RY45_RS11580 IPR015991 Uncharacterised deoxyribonuclease TatD-type RY45_RS11580 IPR018228 Deoxyribonuclease, TatD-related, conserved site RY45_RS11580 IPR032466 RY45_RS11580 RY45_RS11585 IPR003593 AAA+ ATPase domain RY45_RS11585 IPR004622 DNA polymerase III, delta prime subunit RY45_RS11585 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RY45_RS11585 IPR015199 DNA polymerase III, delta subunit, C-terminal RY45_RS11585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11590 IPR018094 Thymidylate kinase RY45_RS11590 IPR018095 Thymidylate kinase, conserved site RY45_RS11590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11595 IPR003770 Uncharacterised protein family UPF0755, YceG-like RY45_RS11595 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RY45_RS11600 IPR001544 Aminotransferase, class IV RY45_RS11600 IPR017824 Aminodeoxychorismate lyase, class IV RY45_RS11605 IPR014030 Beta-ketoacyl synthase, N-terminal RY45_RS11605 IPR014031 Beta-ketoacyl synthase, C-terminal RY45_RS11605 IPR016039 Thiolase-like RY45_RS11605 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RY45_RS11605 IPR018201 Beta-ketoacyl synthase, active site RY45_RS11605 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RY45_RS11610 IPR003231 Acyl carrier protein (ACP) RY45_RS11610 IPR006162 Phosphopantetheine attachment site RY45_RS11610 IPR009081 Acyl carrier protein-like RY45_RS11615 IPR002347 Glucose/ribitol dehydrogenase RY45_RS11615 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RY45_RS11615 IPR016040 NAD(P)-binding domain RY45_RS11615 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS11620 IPR001227 Acyl transferase domain RY45_RS11620 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RY45_RS11620 IPR014043 Acyl transferase RY45_RS11620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS11620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RY45_RS11620 IPR020801 Polyketide synthase, acyl transferase domain RY45_RS11620 IPR024925 Malonyl CoA-acyl carrier protein transacylase RY45_RS11625 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RY45_RS11625 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RY45_RS11625 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RY45_RS11625 IPR016039 Thiolase-like RY45_RS11630 IPR003664 Fatty acid synthesis PlsX protein RY45_RS11630 IPR012281 Phospholipid biosynthesis protein, PlsX-like RY45_RS11630 IPR024084 Isopropylmalate dehydrogenase-like domain RY45_RS11635 IPR002677 Ribosomal protein L32p RY45_RS11635 IPR011332 Zinc-binding ribosomal protein RY45_RS11640 IPR003772 Protein of unknown function DUF177 RY45_RS11645 IPR002913 START domain RY45_RS11645 IPR023393 START-like domain RY45_RS11645 IPR028347 START domain-containing protein RY45_RS11650 IPR000847 Transcription regulator HTH, LysR RY45_RS11650 IPR005119 LysR, substrate-binding RY45_RS11650 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS11655 IPR011701 Major facilitator superfamily RY45_RS11655 IPR020846 Major facilitator superfamily domain RY45_RS11660 IPR003697 Maf-like protein RY45_RS11660 IPR029001 Inosine triphosphate pyrophosphatase-like RY45_RS11665 IPR006439 HAD hydrolase, subfamily IA RY45_RS11665 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS11665 IPR023214 HAD-like domain RY45_RS11670 IPR002942 RNA-binding S4 domain RY45_RS11670 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS11670 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RY45_RS11670 IPR006225 Pseudouridine synthase, RluC/RluD RY45_RS11670 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS11675 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS11675 IPR004659 Ribonuclease E/G RY45_RS11675 IPR012340 Nucleic acid-binding, OB-fold RY45_RS11675 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RY45_RS11675 IPR022967 RNA-binding domain, S1 RY45_RS11675 IPR028878 Ribonuclease E RY45_RS11680 IPR001204 Phosphate transporter RY45_RS11685 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RY45_RS11685 IPR011962 Deoxycytidine triphosphate deaminase RY45_RS11685 IPR029054 dUTPase-like RY45_RS11690 IPR000764 Uridine kinase like RY45_RS11690 IPR006083 Phosphoribulokinase/uridine kinase RY45_RS11690 IPR026008 Uridine kinase RY45_RS11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11695 IPR000808 Mrp, conserved site RY45_RS11695 IPR002744 Domain of unknown function DUF59 RY45_RS11695 IPR019591 Mrp/NBP35 ATP-binding protein RY45_RS11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11700 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS11700 IPR002547 tRNA-binding domain RY45_RS11700 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS11700 IPR012340 Nucleic acid-binding, OB-fold RY45_RS11700 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RY45_RS11700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS11700 IPR014758 Methionyl-tRNA synthetase RY45_RS11700 IPR015413 Methionyl/Leucyl tRNA synthetase RY45_RS11700 IPR023458 Methionine-tRNA ligase, type 1 RY45_RS11700 IPR029038 Methionyl-tRNA synthetase, Zn-domain RY45_RS11705 IPR004045 Glutathione S-transferase, N-terminal RY45_RS11705 IPR004046 Glutathione S-transferase, C-terminal RY45_RS11705 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS11705 IPR012336 Thioredoxin-like fold RY45_RS11710 IPR001792 Acylphosphatase-like domain RY45_RS11710 IPR017968 Acylphosphatase, conserved site RY45_RS11715 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS11720 IPR002478 PUA domain RY45_RS11720 IPR015947 PUA-like domain RY45_RS11720 IPR019614 S-adenosylmethionine-dependent methyltransferase RY45_RS11720 IPR023542 rRNA large subunit methyltransferase I RY45_RS11720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS11725 IPR004045 Glutathione S-transferase, N-terminal RY45_RS11725 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS11725 IPR012336 Thioredoxin-like fold RY45_RS11730 IPR002656 Acyltransferase 3 RY45_RS11740 IPR004536 Selenide water dikinase RY45_RS11740 IPR010918 AIR synthase-related protein, C-terminal domain RY45_RS11740 IPR016188 PurM, N-terminal-like RY45_RS11740 IPR023061 Selenide, water dikinase, class I RY45_RS11745 IPR001763 Rhodanese-like domain RY45_RS11745 IPR017582 tRNA 2-selenouridine synthase RY45_RS11745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11750 IPR001279 Beta-lactamase-like RY45_RS11755 IPR001789 Signal transduction response regulator, receiver domain RY45_RS11755 IPR003607 HD/PDEase domain RY45_RS11755 IPR006674 HD domain RY45_RS11755 IPR011006 CheY-like superfamily RY45_RS11760 IPR001789 Signal transduction response regulator, receiver domain RY45_RS11760 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS11760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS11760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS11760 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS11760 IPR011006 CheY-like superfamily RY45_RS11760 IPR029151 Periplasmic sensor domain-like RY45_RS11765 IPR001021 Ribosomal protein L25, long-form RY45_RS11765 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RY45_RS11765 IPR020055 Ribosomal protein L25, short-form RY45_RS11765 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RY45_RS11765 IPR029751 Ribosomal protein L25 RY45_RS11775 IPR001650 Helicase, C-terminal RY45_RS11775 IPR003593 AAA+ ATPase domain RY45_RS11775 IPR007502 Helicase-associated domain RY45_RS11775 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type RY45_RS11775 IPR011545 DEAD/DEAH box helicase domain RY45_RS11775 IPR011709 Domain of unknown function DUF1605 RY45_RS11775 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS11775 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal RY45_RS11775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11780 IPR000644 CBS domain RY45_RS11785 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS11785 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS11785 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS11795 IPR004401 Nucleoid-associated protein YbaB RY45_RS11800 IPR003593 AAA+ ATPase domain RY45_RS11800 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RY45_RS11800 IPR012763 DNA polymerase III, subunit gamma/ tau RY45_RS11800 IPR021029 DNA polymerase III, tau subunit, domain V RY45_RS11800 IPR022754 DNA polymerase III, gamma subunit, domain III RY45_RS11800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11805 IPR000836 Phosphoribosyltransferase domain RY45_RS11805 IPR005764 Adenine phosphoribosyl transferase RY45_RS11805 IPR029057 Phosphoribosyltransferase-like RY45_RS11810 IPR007401 Protein of unknown function DUF454 RY45_RS11815 IPR001269 tRNA-dihydrouridine synthase RY45_RS11815 IPR013785 Aldolase-type TIM barrel RY45_RS11815 IPR018517 tRNA-dihydrouridine synthase, conserved site RY45_RS11815 IPR032886 RY45_RS11815 RY45_RS11825 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS11830 IPR002121 HRDC domain RY45_RS11830 IPR002562 3'-5' exonuclease domain RY45_RS11830 IPR006292 Ribonuclease D RY45_RS11830 IPR010997 HRDC-like RY45_RS11830 IPR012337 Ribonuclease H-like domain RY45_RS11835 IPR000873 AMP-dependent synthetase/ligase RY45_RS11835 IPR020845 AMP-binding, conserved site RY45_RS11835 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS11840 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS11840 IPR029058 Alpha/Beta hydrolase fold RY45_RS11845 IPR004658 Outer membrane lipoprotein Slp RY45_RS11850 IPR000905 Gcp-like domain RY45_RS11850 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RY45_RS11855 IPR006555 ATP-dependent helicase, C-terminal RY45_RS11855 IPR011545 DEAD/DEAH box helicase domain RY45_RS11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS11865 IPR001348 ATP phosphoribosyltransferase HisG RY45_RS11865 IPR011322 Nitrogen regulatory PII-like, alpha/beta RY45_RS11865 IPR013115 Histidine biosynthesis HisG, C-terminal RY45_RS11865 IPR013820 ATP phosphoribosyltransferase, catalytic domain RY45_RS11865 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RY45_RS11865 IPR018198 ATP phosphoribosyltransferase, conserved site RY45_RS11865 IPR020621 ATP phosphoribosyltransferase HisG, long form RY45_RS11870 IPR001692 Histidinol dehydrogenase, conserved site RY45_RS11870 IPR012131 Histidinol dehydrogenase RY45_RS11870 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS11870 IPR022695 Histidinol dehydrogenase, monofunctional RY45_RS11875 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RY45_RS11875 IPR004839 Aminotransferase, class I/classII RY45_RS11875 IPR005861 Histidinol-phosphate aminotransferase family RY45_RS11875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS11875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS11875 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS11880 IPR000807 Imidazoleglycerol-phosphate dehydratase RY45_RS11880 IPR005954 Histidinol-phosphatase RY45_RS11880 IPR006543 Histidinol-phosphate phosphatase RY45_RS11880 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RY45_RS11880 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RY45_RS11880 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS11880 IPR023214 HAD-like domain RY45_RS11885 IPR010139 Imidazole glycerol phosphate synthase, subunit H RY45_RS11885 IPR017926 Glutamine amidotransferase RY45_RS11885 IPR029062 Class I glutamine amidotransferase-like RY45_RS11890 IPR006062 Histidine biosynthesis RY45_RS11890 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RY45_RS11890 IPR011060 Ribulose-phosphate binding barrel RY45_RS11890 IPR013785 Aldolase-type TIM barrel RY45_RS11890 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RY45_RS11895 IPR001789 Signal transduction response regulator, receiver domain RY45_RS11895 IPR003607 HD/PDEase domain RY45_RS11895 IPR006674 HD domain RY45_RS11895 IPR011006 CheY-like superfamily RY45_RS11900 IPR000014 PAS domain RY45_RS11900 IPR013656 PAS fold-4 RY45_RS11905 IPR000014 PAS domain RY45_RS11905 IPR001610 PAC motif RY45_RS11905 IPR001789 Signal transduction response regulator, receiver domain RY45_RS11905 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS11905 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS11905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS11905 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS11905 IPR011006 CheY-like superfamily RY45_RS11905 IPR013655 PAS fold-3 RY45_RS11905 IPR025201 Sensor protein KdpD, transmembrane domain RY45_RS11910 IPR004651 Histidine biosynthesis, HisF RY45_RS11910 IPR006062 Histidine biosynthesis RY45_RS11910 IPR011060 Ribulose-phosphate binding barrel RY45_RS11910 IPR013785 Aldolase-type TIM barrel RY45_RS11915 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RY45_RS11915 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RY45_RS11915 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RY45_RS11915 IPR023019 Histidine biosynthesis bifunctional protein HisIE RY45_RS11930 IPR000873 AMP-dependent synthetase/ligase RY45_RS11930 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS11935 IPR018385 C4-dicarboxylate anaerobic carrier-like RY45_RS11945 IPR008816 Glycine zipper 2TM domain RY45_RS11950 IPR001322 Lamin Tail Domain RY45_RS11950 IPR003644 Na-Ca exchanger/integrin-beta4 RY45_RS11950 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS11955 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS11955 IPR002888 [2Fe-2S]-binding RY45_RS11955 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RY45_RS11955 IPR012675 Beta-grasp domain RY45_RS11960 IPR002346 Molybdopterin dehydrogenase, FAD-binding RY45_RS11960 IPR005107 CO dehydrogenase flavoprotein, C-terminal RY45_RS11960 IPR016166 FAD-binding, type 2 RY45_RS11960 IPR016167 FAD-binding, type 2, subdomain 1 RY45_RS11960 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS11965 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RY45_RS11965 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RY45_RS11970 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS11975 IPR006680 Amidohydrolase 1 RY45_RS11975 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS11975 IPR014311 Guanine deaminase RY45_RS11975 IPR032466 RY45_RS11975 RY45_RS11980 IPR006042 Xanthine/uracil permease RY45_RS11980 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS11980 IPR017588 Xanthine permease RY45_RS11985 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RY45_RS11985 IPR002888 [2Fe-2S]-binding RY45_RS11985 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RY45_RS11985 IPR017699 Probable selenate reductase, molybdenum-binding subunit RY45_RS11990 IPR002346 Molybdopterin dehydrogenase, FAD-binding RY45_RS11990 IPR005107 CO dehydrogenase flavoprotein, C-terminal RY45_RS11990 IPR016166 FAD-binding, type 2 RY45_RS11990 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS11990 IPR017698 Probable selenate reductase, FAD-binding subunit RY45_RS11995 IPR006680 Amidohydrolase 1 RY45_RS11995 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS11995 IPR032466 RY45_RS11995 RY45_RS12000 IPR009051 Alpha-helical ferredoxin RY45_RS12000 IPR013785 Aldolase-type TIM barrel RY45_RS12000 IPR017701 Putative selenate reductase YgfK RY45_RS12000 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS12000 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS12000 IPR028261 Dihydroprymidine dehydrogenase domain II RY45_RS12005 IPR025877 MobA-like NTP transferase domain RY45_RS12005 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS12010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12015 IPR003777 XdhC- CoxI RY45_RS12015 IPR016185 Pre-ATP-grasp domain RY45_RS12015 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family RY45_RS12015 IPR027051 XdhC Rossmann domain RY45_RS12020 IPR000620 Drug/metabolite transporter RY45_RS12025 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS12025 IPR003964 Carbamate kinase RY45_RS12030 IPR006680 Amidohydrolase 1 RY45_RS12030 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS12030 IPR011778 Hydantoinase/dihydropyrimidinase RY45_RS12030 IPR032466 RY45_RS12030 RY45_RS12035 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RY45_RS12035 IPR002933 Peptidase M20 RY45_RS12035 IPR011650 Peptidase M20, dimerisation domain RY45_RS12035 IPR017706 Peptidase M20/DapE, YgeY RY45_RS12040 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS12040 IPR010081 Diaminopropionate ammonia-lyase RY45_RS12040 IPR019871 Diaminopropionate ammonia-lyase, subgroup RY45_RS12045 IPR002082 Aspartate carbamoyltransferase RY45_RS12045 IPR006130 Aspartate/ornithine carbamoyltransferase RY45_RS12045 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RY45_RS12045 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RY45_RS12045 IPR017702 Putative carbamoyltransferase YgeW RY45_RS12050 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS12050 IPR002197 DNA binding HTH domain, Fis-type RY45_RS12050 IPR003593 AAA+ ATPase domain RY45_RS12050 IPR009057 Homeodomain-like RY45_RS12050 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS12050 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS12050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12050 IPR029016 GAF domain-like RY45_RS12060 IPR004776 Auxin efflux carrier RY45_RS12065 IPR009822 YaeQ RY45_RS12065 IPR011335 Restriction endonuclease type II-like RY45_RS12070 IPR001753 Crotonase superfamily RY45_RS12070 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RY45_RS12070 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RY45_RS12070 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RY45_RS12070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS12070 IPR012802 Fatty oxidation complex, alpha subunit FadJ RY45_RS12070 IPR013328 Dehydrogenase, multihelical RY45_RS12070 IPR016040 NAD(P)-binding domain RY45_RS12070 IPR029045 ClpP/crotonase-like domain RY45_RS12075 IPR002155 Thiolase RY45_RS12075 IPR012806 Acetyl-CoA C-acyltransferase FadI RY45_RS12075 IPR016039 Thiolase-like RY45_RS12075 IPR020613 Thiolase, conserved site RY45_RS12075 IPR020615 Thiolase, acyl-enzyme intermediate active site RY45_RS12075 IPR020616 Thiolase, N-terminal RY45_RS12075 IPR020617 Thiolase, C-terminal RY45_RS12080 IPR011703 ATPase, AAA-3 RY45_RS12080 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RY45_RS12080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12085 IPR002881 Domain of unknown function DUF58 RY45_RS12090 IPR025489 Protein of unknown function (DUF4381 RY45_RS12095 IPR002035 von Willebrand factor, type A RY45_RS12100 IPR002035 von Willebrand factor, type A RY45_RS12100 IPR011990 Tetratricopeptide-like helical domain RY45_RS12100 IPR013105 Tetratricopeptide TPR2 RY45_RS12100 IPR019734 Tetratricopeptide repeat RY45_RS12105 IPR025738 Aerotolerance-related protein BatD RY45_RS12110 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RY45_RS12110 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS12110 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12110 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RY45_RS12110 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS12110 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS12110 IPR014284 RNA polymerase sigma-70 like domain RY45_RS12115 IPR021806 Protein of unknown function DUF3379 RY45_RS12120 IPR005017 Membrane protein, aromatic hydrocarbon degradation RY45_RS12125 IPR005017 Membrane protein, aromatic hydrocarbon degradation RY45_RS12130 IPR001633 EAL domain RY45_RS12130 IPR013976 Metal-dependent hydrolase HDOD RY45_RS12130 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing RY45_RS12135 IPR002155 Thiolase RY45_RS12135 IPR016039 Thiolase-like RY45_RS12135 IPR020610 Thiolase, active site RY45_RS12135 IPR020615 Thiolase, acyl-enzyme intermediate active site RY45_RS12135 IPR020616 Thiolase, N-terminal RY45_RS12135 IPR020617 Thiolase, C-terminal RY45_RS12140 IPR000551 MerR-type HTH domain RY45_RS12140 IPR009061 DNA binding domain, putative RY45_RS12145 IPR001991 Sodium:dicarboxylate symporter RY45_RS12150 IPR009664 Protein of unknown function DUF1255 RY45_RS12150 IPR011051 RmlC-like cupin domain RY45_RS12150 IPR014710 RmlC-like jelly roll fold RY45_RS12155 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RY45_RS12155 IPR005130 Serine dehydratase-like, alpha subunit RY45_RS12155 IPR005131 Serine dehydratase beta chain RY45_RS12155 IPR029009 Allosteric substrate binding domain RY45_RS12160 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RY45_RS12160 IPR005130 Serine dehydratase-like, alpha subunit RY45_RS12160 IPR005131 Serine dehydratase beta chain RY45_RS12160 IPR029009 Allosteric substrate binding domain RY45_RS12165 IPR011757 Lytic transglycosylase MltB RY45_RS12165 IPR011970 Lytic murein transglycosylase RY45_RS12165 IPR023346 Lysozyme-like domain RY45_RS12165 IPR031304 RY45_RS12165 RY45_RS12170 IPR027354 YcgL domain RY45_RS12175 IPR005526 Septum formation inhibitor MinC, C-terminal RY45_RS12175 IPR007874 Septum formation inhibitor MinC, N-terminal RY45_RS12175 IPR013033 Septum formation inhibitor MinC RY45_RS12175 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RY45_RS12180 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RY45_RS12180 IPR010223 ATP binding protein MinD, bacterial-type RY45_RS12180 IPR025501 ATP binding protein MinD RY45_RS12180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12185 IPR005527 Septum formation topological specificity factor MinE RY45_RS12190 IPR007376 dsDNA mimic, putative RY45_RS12195 IPR001264 Glycosyl transferase, family 51 RY45_RS12195 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase RY45_RS12195 IPR023346 Lysozyme-like domain RY45_RS12200 IPR007376 dsDNA mimic, putative RY45_RS12205 IPR010710 Protein of unknown function DUF1289 RY45_RS12210 IPR014464 Conserved virulence factor B RY45_RS12215 IPR011978 Uncharacterised protein family UPF0149 RY45_RS12220 IPR000835 MarR-type HTH domain RY45_RS12220 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12225 IPR025346 Protein of unknown function DUF4250 RY45_RS12235 IPR003680 Flavodoxin-like fold RY45_RS12235 IPR023048 NADH-azoreductase, FMN-dependent RY45_RS12235 IPR029039 Flavoprotein-like RY45_RS12240 IPR000620 Drug/metabolite transporter RY45_RS12245 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS12245 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RY45_RS12245 IPR005862 Phosphoribosylglycinamide formyltransferase 2 RY45_RS12245 IPR011054 Rudiment single hybrid motif RY45_RS12245 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS12245 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS12245 IPR016185 Pre-ATP-grasp domain RY45_RS12250 IPR006439 HAD hydrolase, subfamily IA RY45_RS12250 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS12250 IPR023214 HAD-like domain RY45_RS12255 IPR017143 Uncharacterised conserved protein UCP037225 RY45_RS12255 IPR025990 Cysteine-rich CPXCG protein RY45_RS12260 IPR001783 Lumazine-binding protein RY45_RS12260 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS12260 IPR023366 ATP synthase subunit alpha-like domain RY45_RS12260 IPR026017 Lumazine-binding domain RY45_RS12265 IPR009624 Uncharacterised protein family UPF0253 RY45_RS12270 IPR002528 Multi antimicrobial extrusion protein RY45_RS12300 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain RY45_RS12300 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain RY45_RS12300 IPR006172 DNA-directed DNA polymerase, family B RY45_RS12300 IPR012337 Ribonuclease H-like domain RY45_RS12300 IPR017964 DNA-directed DNA polymerase, family B, conserved site RY45_RS12300 IPR023211 DNA polymerase, palm domain RY45_RS12305 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RY45_RS12310 IPR000160 GGDEF domain RY45_RS12310 IPR029787 Nucleotide cyclase RY45_RS12315 IPR016181 Acyl-CoA N-acyltransferase RY45_RS12320 IPR000687 RIO kinase RY45_RS12320 IPR011009 Protein kinase-like domain RY45_RS12320 IPR018935 RIO kinase, conserved site RY45_RS12325 IPR004960 Bacterial lipid A biosynthesis acyltransferase RY45_RS12325 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase RY45_RS12330 IPR004960 Bacterial lipid A biosynthesis acyltransferase RY45_RS12330 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase RY45_RS12335 IPR004695 Voltage-dependent anion channel RY45_RS12340 IPR000847 Transcription regulator HTH, LysR RY45_RS12340 IPR005119 LysR, substrate-binding RY45_RS12340 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12345 IPR000683 Oxidoreductase, N-terminal RY45_RS12345 IPR016040 NAD(P)-binding domain RY45_RS12350 IPR001719 AP endonuclease 2 RY45_RS12350 IPR013022 Xylose isomerase-like, TIM barrel domain RY45_RS12350 IPR018246 AP endonuclease 2, zinc binding site RY45_RS12355 IPR000847 Transcription regulator HTH, LysR RY45_RS12355 IPR005119 LysR, substrate-binding RY45_RS12355 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12360 IPR002347 Glucose/ribitol dehydrogenase RY45_RS12360 IPR016040 NAD(P)-binding domain RY45_RS12365 IPR003607 HD/PDEase domain RY45_RS12365 IPR006674 HD domain RY45_RS12365 IPR006675 Uncharacterised domain HDIG RY45_RS12370 IPR000572 Oxidoreductase, molybdopterin-binding domain RY45_RS12375 IPR000160 GGDEF domain RY45_RS12375 IPR001633 EAL domain RY45_RS12375 IPR029787 Nucleotide cyclase RY45_RS12380 IPR001360 Glycoside hydrolase, family 1 RY45_RS12380 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS12380 IPR017853 Glycoside hydrolase, superfamily RY45_RS12380 IPR033132 RY45_RS12380 RY45_RS12385 IPR000847 Transcription regulator HTH, LysR RY45_RS12385 IPR005119 LysR, substrate-binding RY45_RS12385 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12395 IPR005471 Transcription regulator IclR, N-terminal RY45_RS12395 IPR006118 Recombinase, conserved site RY45_RS12395 IPR006119 Resolvase, N-terminal RY45_RS12395 IPR009057 Homeodomain-like RY45_RS12400 IPR021248 Protein of unknown function DUF2787 RY45_RS12405 IPR001405 RadC protein RY45_RS12405 IPR020891 Uncharacterised protein family UPF0758, conserved site RY45_RS12405 IPR025657 RadC-like JAB domain RY45_RS12410 IPR006935 Helicase/UvrB domain RY45_RS12410 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal RY45_RS12410 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12415 IPR029470 PD-(D/E)XK nuclease superfamily RY45_RS12420 IPR000055 Restriction endonuclease, type I, HsdS RY45_RS12425 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS12425 IPR003356 DNA methylase, adenine-specific RY45_RS12425 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RY45_RS12425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS12430 IPR002694 Zinc finger, CHC2-type RY45_RS12430 IPR006500 DNA primase, phage/plasmid RY45_RS12430 IPR013264 DNA primase, catalytic core, N-terminal RY45_RS12430 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal RY45_RS12430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12435 IPR025605 OST-HTH/LOTUS domain RY45_RS12440 IPR001584 Integrase, catalytic core RY45_RS12440 IPR012337 Ribonuclease H-like domain RY45_RS12450 IPR002104 Integrase, catalytic RY45_RS12450 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS12450 IPR013762 Integrase-like, catalytic core RY45_RS12450 IPR023109 Integrase/recombinase, N-terminal RY45_RS12455 IPR002781 Transmembrane protein TauE like RY45_RS12460 IPR002293 Amino acid/polyamine transporter I RY45_RS12460 IPR004754 Amino acid antiporter RY45_RS12460 IPR022461 Arginine/ornithine antiporter RY45_RS12465 IPR002347 Glucose/ribitol dehydrogenase RY45_RS12465 IPR016040 NAD(P)-binding domain RY45_RS12465 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS12470 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RY45_RS12470 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RY45_RS12470 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS12470 IPR011548 3-hydroxyisobutyrate dehydrogenase RY45_RS12470 IPR013328 Dehydrogenase, multihelical RY45_RS12470 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RY45_RS12470 IPR016040 NAD(P)-binding domain RY45_RS12470 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RY45_RS12475 IPR029045 ClpP/crotonase-like domain RY45_RS12475 IPR032259 RY45_RS12475 RY45_RS12480 IPR001753 Crotonase superfamily RY45_RS12480 IPR014748 Crontonase, C-terminal RY45_RS12480 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RY45_RS12480 IPR029045 ClpP/crotonase-like domain RY45_RS12485 IPR006089 Acyl-CoA dehydrogenase, conserved site RY45_RS12485 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RY45_RS12485 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RY45_RS12485 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RY45_RS12485 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RY45_RS12490 IPR010061 Methylmalonate-semialdehyde dehydrogenase RY45_RS12490 IPR015590 Aldehyde dehydrogenase domain RY45_RS12490 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS12490 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS12490 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS12490 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS12495 IPR006089 Acyl-CoA dehydrogenase, conserved site RY45_RS12495 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RY45_RS12495 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RY45_RS12495 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RY45_RS12495 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RY45_RS12500 IPR000022 Carboxyl transferase RY45_RS12500 IPR029045 ClpP/crotonase-like domain RY45_RS12505 IPR001753 Crotonase superfamily RY45_RS12505 IPR014748 Crontonase, C-terminal RY45_RS12505 IPR029045 ClpP/crotonase-like domain RY45_RS12510 IPR000089 Biotin/lipoyl attachment RY45_RS12510 IPR001882 Biotin-binding site RY45_RS12510 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RY45_RS12510 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RY45_RS12510 IPR005482 Biotin carboxylase, C-terminal RY45_RS12510 IPR011053 Single hybrid motif RY45_RS12510 IPR011054 Rudiment single hybrid motif RY45_RS12510 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS12510 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS12510 IPR016185 Pre-ATP-grasp domain RY45_RS12515 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site RY45_RS12515 IPR000891 Pyruvate carboxyltransferase RY45_RS12515 IPR013785 Aldolase-type TIM barrel RY45_RS12520 IPR000551 MerR-type HTH domain RY45_RS12520 IPR009061 DNA binding domain, putative RY45_RS12525 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS12530 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS12530 IPR008023 Protein of unknown function DUF748 RY45_RS12535 IPR000791 GPR1/FUN34/yaaH RY45_RS12540 IPR010384 MtfA family RY45_RS12540 IPR024079 Metallopeptidase, catalytic domain RY45_RS12545 IPR000182 GNAT domain RY45_RS12545 IPR016181 Acyl-CoA N-acyltransferase RY45_RS12550 IPR001463 Sodium:alanine symporter RY45_RS12565 IPR025188 Domain of unknown function DUF4113 RY45_RS12570 IPR009228 Capsid scaffolding protein GpO RY45_RS12575 IPR001753 Crotonase superfamily RY45_RS12575 IPR029045 ClpP/crotonase-like domain RY45_RS12580 IPR000595 Cyclic nucleotide-binding domain RY45_RS12580 IPR000644 CBS domain RY45_RS12580 IPR005105 Protein-PII uridylyltransferase, N-terminal RY45_RS12580 IPR014710 RmlC-like jelly roll fold RY45_RS12580 IPR018490 Cyclic nucleotide-binding-like RY45_RS12580 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding RY45_RS12585 IPR012337 Ribonuclease H-like domain RY45_RS12585 IPR013520 Exonuclease, RNase T/DNA polymerase III RY45_RS12590 IPR007436 Protein of unknown function DUF485 RY45_RS12595 IPR001734 Sodium/solute symporter RY45_RS12595 IPR018212 Sodium/solute symporter, conserved site RY45_RS12600 IPR003439 ABC transporter-like RY45_RS12600 IPR003593 AAA+ ATPase domain RY45_RS12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12600 IPR032781 RY45_RS12600 RY45_RS12605 IPR027304 Trigger factor/SurA domain RY45_RS12615 IPR003111 Peptidase S16, lon N-terminal RY45_RS12615 IPR003593 AAA+ ATPase domain RY45_RS12615 IPR003959 ATPase, AAA-type, core RY45_RS12615 IPR004815 Lon protease, bacterial/eukaryotic-type RY45_RS12615 IPR008268 Peptidase S16, active site RY45_RS12615 IPR008269 Peptidase S16, Lon C-terminal RY45_RS12615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS12615 IPR015947 PUA-like domain RY45_RS12615 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS12615 IPR027065 Lon protease RY45_RS12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12615 IPR027543 Lon protease, bacterial RY45_RS12620 IPR003593 AAA+ ATPase domain RY45_RS12620 IPR003959 ATPase, AAA-type, core RY45_RS12620 IPR004487 Clp protease, ATP-binding subunit ClpX RY45_RS12620 IPR010603 Zinc finger, ClpX C4-type RY45_RS12620 IPR019489 Clp ATPase, C-terminal RY45_RS12620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12625 IPR001907 ATP-dependent Clp protease proteolytic subunit RY45_RS12625 IPR018215 ClpP, active site RY45_RS12625 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RY45_RS12625 IPR029045 ClpP/crotonase-like domain RY45_RS12625 IPR033135 RY45_RS12625 RY45_RS12630 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS12630 IPR005215 Trigger factor RY45_RS12630 IPR008880 Trigger factor, C-terminal domain RY45_RS12630 IPR008881 Trigger factor, ribosome-binding, bacterial RY45_RS12630 IPR027304 Trigger factor/SurA domain RY45_RS12635 IPR005185 Protein of unknown function DUF307 RY45_RS12635 IPR031308 RY45_RS12635 RY45_RS12640 IPR003607 HD/PDEase domain RY45_RS12640 IPR006674 HD domain RY45_RS12640 IPR022971 5'-deoxynucleotidase YfbR RY45_RS12645 IPR003838 Permease FtsX-like RY45_RS12645 IPR025857 MacB-like periplasmic core domain RY45_RS12650 IPR003439 ABC transporter-like RY45_RS12650 IPR003593 AAA+ ATPase domain RY45_RS12650 IPR011924 Lipoprotein releasing system, ATP-binding protein RY45_RS12650 IPR017871 ABC transporter, conserved site RY45_RS12650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12655 IPR003838 Permease FtsX-like RY45_RS12655 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RY45_RS12655 IPR025857 MacB-like periplasmic core domain RY45_RS12665 IPR001650 Helicase, C-terminal RY45_RS12665 IPR003711 CarD-like/TRCF domain RY45_RS12665 IPR004576 Transcription-repair coupling factor RY45_RS12665 IPR005118 Transcription-repair-coupling factor, C-terminal domain RY45_RS12665 IPR011545 DEAD/DEAH box helicase domain RY45_RS12665 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS12665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12670 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase RY45_RS12670 IPR020548 Fructose-1,6-bisphosphatase, active site RY45_RS12670 IPR028343 Fructose-1,6-bisphosphatase RY45_RS12670 IPR033391 RY45_RS12670 RY45_RS12675 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS12675 IPR030678 RY45_RS12675 RY45_RS12680 IPR000620 Drug/metabolite transporter RY45_RS12685 IPR009491 Protein of unknown function DUF1107 RY45_RS12690 IPR004449 Phosphohistidine phosphatase SixA, subgroup RY45_RS12690 IPR013078 Histidine phosphatase superfamily, clade-1 RY45_RS12690 IPR029033 Histidine phosphatase superfamily RY45_RS12695 IPR001431 Peptidase M16, zinc-binding site RY45_RS12695 IPR007863 Peptidase M16, C-terminal domain RY45_RS12695 IPR011237 Peptidase M16 domain RY45_RS12695 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RY45_RS12695 IPR011765 Peptidase M16, N-terminal RY45_RS12695 IPR032632 RY45_RS12695 RY45_RS12700 IPR008854 TPMT family RY45_RS12700 IPR025835 Thiopurine S-methyltransferase RY45_RS12700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS12705 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain RY45_RS12705 IPR003591 Leucine-rich repeat, typical subtype RY45_RS12705 IPR011009 Protein kinase-like domain RY45_RS12705 IPR017441 Protein kinase, ATP binding site RY45_RS12705 IPR032675 RY45_RS12705 RY45_RS12710 IPR002347 Glucose/ribitol dehydrogenase RY45_RS12710 IPR016040 NAD(P)-binding domain RY45_RS12715 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RY45_RS12715 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RY45_RS12715 IPR009057 Homeodomain-like RY45_RS12715 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS12715 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RY45_RS12715 IPR018060 DNA binding HTH domain, AraC-type RY45_RS12730 IPR001674 GMP synthase, C-terminal RY45_RS12730 IPR004739 GMP synthase, N-terminal RY45_RS12730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS12730 IPR017926 Glutamine amidotransferase RY45_RS12730 IPR022310 NAD/GMP synthase RY45_RS12730 IPR022955 GMP synthase RY45_RS12730 IPR029062 Class I glutamine amidotransferase-like RY45_RS12735 IPR000644 CBS domain RY45_RS12735 IPR001093 IMP dehydrogenase/GMP reductase RY45_RS12735 IPR005990 Inosine-5'-monophosphate dehydrogenase RY45_RS12735 IPR013785 Aldolase-type TIM barrel RY45_RS12735 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RY45_RS12740 IPR003855 K+ potassium transporter RY45_RS12740 IPR023051 Potassium uptake protein, low affinity, Kup RY45_RS12745 IPR003538 Gram-negative bacterial TonB protein RY45_RS12745 IPR006260 TonB, C-terminal RY45_RS12750 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS12755 IPR003400 Biopolymer transport protein ExbD/TolR RY45_RS12760 IPR000620 Drug/metabolite transporter RY45_RS12765 IPR003753 Exonuclease VII, large subunit RY45_RS12765 IPR020579 Exonuclease VII, large subunit, C-terminal RY45_RS12765 IPR025824 OB-fold nucleic acid binding domain RY45_RS12770 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS12770 IPR007197 Radical SAM RY45_RS12770 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS12770 IPR026332 Putative heme utilization radical SAM enzyme HutW RY45_RS12775 IPR003660 HAMP linker domain RY45_RS12775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS12775 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS12780 IPR006218 DAHP synthetase I/KDSA RY45_RS12780 IPR006219 DHAP synthase, class 1 RY45_RS12780 IPR013785 Aldolase-type TIM barrel RY45_RS12785 IPR001986 Enolpyruvate transferase domain RY45_RS12785 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RY45_RS12785 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RY45_RS12785 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RY45_RS12790 IPR000192 Aminotransferase class V domain RY45_RS12790 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS12790 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS12790 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS12790 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RY45_RS12790 IPR022278 Phosphoserine aminotransferase RY45_RS12795 IPR001308 Electron transfer flavoprotein, alpha subunit RY45_RS12795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS12795 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RY45_RS12795 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RY45_RS12795 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site RY45_RS12795 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS12800 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RY45_RS12800 IPR012255 Electron transfer flavoprotein, beta subunit RY45_RS12800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS12800 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RY45_RS12805 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RY45_RS12805 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase RY45_RS12805 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS12810 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RY45_RS12810 IPR004488 Magnesium/cobalt transport protein CorA RY45_RS12815 IPR021318 Protein of unknown function DUF2919 RY45_RS12825 IPR011701 Major facilitator superfamily RY45_RS12825 IPR020846 Major facilitator superfamily domain RY45_RS12830 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS12830 IPR010916 TonB box, conserved site RY45_RS12830 IPR012910 TonB-dependent receptor, plug RY45_RS12835 IPR000522 ABC transporter, permease protein RY45_RS12835 IPR029022 ABC transporter, BtuC-like RY45_RS12840 IPR000522 ABC transporter, permease protein RY45_RS12840 IPR029022 ABC transporter, BtuC-like RY45_RS12845 IPR003439 ABC transporter-like RY45_RS12845 IPR003593 AAA+ ATPase domain RY45_RS12845 IPR017871 ABC transporter, conserved site RY45_RS12845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12850 IPR003542 Enterobactin synthetase-like, component D RY45_RS12850 IPR008278 4'-phosphopantetheinyl transferase superfamily RY45_RS12855 IPR002491 ABC transporter periplasmic binding domain RY45_RS12860 IPR000873 AMP-dependent synthetase/ligase RY45_RS12860 IPR010071 Amino acid adenylation domain RY45_RS12860 IPR020845 AMP-binding, conserved site RY45_RS12860 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS12865 IPR000873 AMP-dependent synthetase/ligase RY45_RS12865 IPR001242 Condensation domain RY45_RS12865 IPR006162 Phosphopantetheine attachment site RY45_RS12865 IPR009081 Acyl carrier protein-like RY45_RS12865 IPR010060 Non-ribosomal peptide synthase RY45_RS12865 IPR010071 Amino acid adenylation domain RY45_RS12865 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RY45_RS12865 IPR020845 AMP-binding, conserved site RY45_RS12870 IPR002347 Glucose/ribitol dehydrogenase RY45_RS12870 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase RY45_RS12870 IPR016040 NAD(P)-binding domain RY45_RS12870 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS12875 IPR000873 AMP-dependent synthetase/ligase RY45_RS12875 IPR001242 Condensation domain RY45_RS12875 IPR009081 Acyl carrier protein-like RY45_RS12875 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RY45_RS12875 IPR020845 AMP-binding, conserved site RY45_RS12875 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS12880 IPR000868 Isochorismatase-like RY45_RS12880 IPR009081 Acyl carrier protein-like RY45_RS12880 IPR016291 Isochorismatase RY45_RS12885 IPR000873 AMP-dependent synthetase/ligase RY45_RS12885 IPR011963 2,3-dihydroxybenzoate-AMP ligase RY45_RS12885 IPR020845 AMP-binding, conserved site RY45_RS12885 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS12890 IPR004561 Isochorismate synthase RY45_RS12890 IPR005801 ADC synthase RY45_RS12890 IPR015890 Chorismate binding, C-terminal RY45_RS12895 IPR010835 Protein of unknown function DUF1439 RY45_RS12900 IPR008928 Six-hairpin glycosidase-like RY45_RS12905 IPR005835 Nucleotidyl transferase RY45_RS12905 IPR005836 ADP-glucose pyrophosphorylase, conserved site RY45_RS12905 IPR011004 Trimeric LpxA-like RY45_RS12905 IPR011831 Glucose-1-phosphate adenylyltransferase RY45_RS12905 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial RY45_RS12905 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS12910 IPR000160 GGDEF domain RY45_RS12910 IPR001633 EAL domain RY45_RS12910 IPR029787 Nucleotide cyclase RY45_RS12920 IPR021284 Protein of unknown function DUF2750 RY45_RS12925 IPR011611 Carbohydrate kinase PfkB RY45_RS12925 IPR029056 Ribokinase-like RY45_RS12930 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RY45_RS12930 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RY45_RS12935 IPR001015 Ferrochelatase RY45_RS12935 IPR019772 Ferrochelatase, active site RY45_RS12940 IPR000850 Adenylate kinase/UMP-CMP kinase RY45_RS12940 IPR006259 Adenylate kinase subfamily RY45_RS12940 IPR007862 Adenylate kinase, active site lid domain RY45_RS12940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12945 IPR001404 Heat shock protein Hsp90 family RY45_RS12945 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS12945 IPR019805 Heat shock protein Hsp90, conserved site RY45_RS12945 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS12945 IPR020575 Heat shock protein Hsp90, N-terminal RY45_RS12950 IPR000093 DNA recombination protein RecR RY45_RS12950 IPR006171 Toprim domain RY45_RS12950 IPR023627 Recombination protein RecR RY45_RS12950 IPR023628 Recombination protein RecR, C4-type zinc finger RY45_RS12955 IPR003786 Protein FdhD RY45_RS12955 IPR016193 Cytidine deaminase-like RY45_RS12960 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS12960 IPR003018 GAF domain RY45_RS12960 IPR003593 AAA+ ATPase domain RY45_RS12960 IPR009057 Homeodomain-like RY45_RS12960 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS12960 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS12960 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS12960 IPR029016 GAF domain-like RY45_RS12970 IPR006478 Formate dehydrogenase, alpha subunit RY45_RS12970 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RY45_RS12970 IPR006656 Molybdopterin oxidoreductase RY45_RS12970 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS12970 IPR009010 Aspartate decarboxylase-like domain RY45_RS12975 IPR006656 Molybdopterin oxidoreductase RY45_RS12975 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS12975 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RY45_RS12980 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS12980 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS12985 IPR003855 K+ potassium transporter RY45_RS12985 IPR023051 Potassium uptake protein, low affinity, Kup RY45_RS12990 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS12990 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS12995 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RY45_RS12995 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RY45_RS13000 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RY45_RS13000 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RY45_RS13005 IPR001135 NADH-quinone oxidoreductase, subunit D RY45_RS13005 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RY45_RS13005 IPR001501 Nickel-dependent hydrogenase, large subunit RY45_RS13005 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RY45_RS13005 IPR029014 NiFe hydrogenase-like RY45_RS13010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13015 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RY45_RS13015 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RY45_RS13020 IPR010005 Formate hydrogenlyase maturation HycH RY45_RS13025 IPR000671 Peptidase A31 family RY45_RS13025 IPR004420 Peptidase A31, hydrogenase maturation protease HycI RY45_RS13025 IPR023430 Peptidase HybD-like domain RY45_RS13030 IPR004534 L-seryl-tRNA selenium transferase RY45_RS13030 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS13030 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS13030 IPR018319 L-seryl-tRNA selenium transferase-like RY45_RS13030 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain RY45_RS13035 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS13035 IPR004535 Translation elongation factor, selenocysteine-specific RY45_RS13035 IPR005225 Small GTP-binding protein domain RY45_RS13035 IPR009000 Translation protein, beta-barrel domain RY45_RS13035 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS13035 IPR015191 Translation elongation factor SelB, winged helix, type 3 RY45_RS13035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13040 IPR001792 Acylphosphatase-like domain RY45_RS13040 IPR004421 Carbamoyltransferase, HypF-type RY45_RS13040 IPR006070 YrdC-like domain RY45_RS13040 IPR011125 Zinc finger, HypF-type RY45_RS13040 IPR017945 DHBP synthase RibB-like alpha/beta domain RY45_RS13040 IPR017968 Acylphosphatase, conserved site RY45_RS13045 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RY45_RS13050 IPR002780 Hydrogenase formation HypD protein RY45_RS13055 IPR010918 AIR synthase-related protein, C-terminal domain RY45_RS13055 IPR011854 Hydrogenase expression/formation protein HypE RY45_RS13055 IPR016188 PurM, N-terminal-like RY45_RS13060 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF RY45_RS13060 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RY45_RS13065 IPR003495 CobW/HypB/UreG domain RY45_RS13065 IPR004392 Hydrogenase accessory protein HypB RY45_RS13065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13070 IPR003439 ABC transporter-like RY45_RS13070 IPR003593 AAA+ ATPase domain RY45_RS13070 IPR017871 ABC transporter, conserved site RY45_RS13070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13075 IPR003439 ABC transporter-like RY45_RS13075 IPR003593 AAA+ ATPase domain RY45_RS13075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13080 IPR000515 MetI-like domain RY45_RS13085 IPR000515 MetI-like domain RY45_RS13090 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS13090 IPR030678 RY45_RS13090 RY45_RS13095 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RY45_RS13100 IPR000671 Peptidase A31 family RY45_RS13100 IPR004419 Peptidase A31, hydrogenase expression/formation protein RY45_RS13100 IPR023430 Peptidase HybD-like domain RY45_RS13105 IPR001501 Nickel-dependent hydrogenase, large subunit RY45_RS13105 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site RY45_RS13105 IPR029014 NiFe hydrogenase-like RY45_RS13115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13115 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RY45_RS13120 IPR001821 [NiFe]-hydrogenase, small subunit RY45_RS13120 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RY45_RS13120 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RY45_RS13125 IPR001789 Signal transduction response regulator, receiver domain RY45_RS13125 IPR011006 CheY-like superfamily RY45_RS13130 IPR002645 STAS domain RY45_RS13135 IPR002545 CheW-like protein RY45_RS13135 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS13135 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS13135 IPR004105 Histidine kinase CheA-like, homodimeric domain RY45_RS13135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS13135 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS13140 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13140 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS13140 IPR024478 4HB MCP domain RY45_RS13145 IPR002545 CheW-like protein RY45_RS13150 IPR000780 MCP methyltransferase, CheR-type RY45_RS13150 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal RY45_RS13150 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RY45_RS13150 IPR026024 Chemotaxis protein methyltransferase CheR RY45_RS13150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS13155 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RY45_RS13155 IPR001789 Signal transduction response regulator, receiver domain RY45_RS13155 IPR008248 Signal transduction response regulator, chemotaxis, CheB RY45_RS13155 IPR011006 CheY-like superfamily RY45_RS13160 IPR001633 EAL domain RY45_RS13160 IPR001789 Signal transduction response regulator, receiver domain RY45_RS13160 IPR011006 CheY-like superfamily RY45_RS13165 IPR003660 HAMP linker domain RY45_RS13165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13165 IPR024478 4HB MCP domain RY45_RS13170 IPR000821 Alanine racemase RY45_RS13170 IPR001608 Alanine racemase, N-terminal RY45_RS13170 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS13170 IPR011079 Alanine racemase, C-terminal RY45_RS13170 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RY45_RS13170 IPR029066 PLP-binding barrel RY45_RS13175 IPR005146 B3/B4 tRNA-binding domain RY45_RS13175 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RY45_RS13180 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS13180 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS13180 IPR011051 RmlC-like cupin domain RY45_RS13180 IPR013096 Cupin 2, conserved barrel RY45_RS13180 IPR014710 RmlC-like jelly roll fold RY45_RS13190 IPR001902 Sulphate anion transporter RY45_RS13190 IPR002645 STAS domain RY45_RS13190 IPR011547 Sulphate transporter RY45_RS13205 IPR005134 Uncharacterised protein family UPF0114 RY45_RS13205 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria RY45_RS13215 IPR011031 Multihaem cytochrome RY45_RS13215 IPR011045 Nitrous oxide reductase, N-terminal RY45_RS13215 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS13215 IPR023155 Cytochrome c-552/4 RY45_RS13220 IPR004923 Iron permease FTR1/Fip1/EfeU RY45_RS13225 IPR002937 Amine oxidase RY45_RS13225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS13240 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RY45_RS13240 IPR011701 Major facilitator superfamily RY45_RS13240 IPR020846 Major facilitator superfamily domain RY45_RS13245 IPR025579 Domain of unknown function DUF4357 RY45_RS13250 IPR003439 ABC transporter-like RY45_RS13250 IPR003593 AAA+ ATPase domain RY45_RS13250 IPR017871 ABC transporter, conserved site RY45_RS13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13255 IPR003838 Permease FtsX-like RY45_RS13255 IPR025857 MacB-like periplasmic core domain RY45_RS13260 IPR010791 Hydroxyneurosporene synthase RY45_RS13260 IPR023374 AttH-like domain RY45_RS13260 IPR033451 RY45_RS13260 RY45_RS13280 IPR004017 Cysteine-rich domain RY45_RS13280 IPR004113 FAD-linked oxidase, C-terminal RY45_RS13280 IPR006094 FAD linked oxidase, N-terminal RY45_RS13280 IPR009051 Alpha-helical ferredoxin RY45_RS13280 IPR016164 FAD-linked oxidase-like, C-terminal RY45_RS13280 IPR016166 FAD-binding, type 2 RY45_RS13280 IPR016167 FAD-binding, type 2, subdomain 1 RY45_RS13280 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS13280 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RY45_RS13280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13285 IPR003741 Domain of unknown function DUF162 RY45_RS13285 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RY45_RS13290 IPR003741 Domain of unknown function DUF162 RY45_RS13290 IPR004452 4Fe-4S binding protein RY45_RS13290 IPR009051 Alpha-helical ferredoxin RY45_RS13290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13290 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13290 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RY45_RS13290 IPR024569 4Fe-4S binding protein, C-terminal RY45_RS13295 IPR004017 Cysteine-rich domain RY45_RS13300 IPR003804 L-lactate permease RY45_RS13305 IPR000847 Transcription regulator HTH, LysR RY45_RS13305 IPR005119 LysR, substrate-binding RY45_RS13305 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS13310 IPR027373 Ribbon-helix-helix domain RY45_RS13315 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS13315 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS13320 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS13320 IPR000639 Epoxide hydrolase-like RY45_RS13320 IPR029058 Alpha/Beta hydrolase fold RY45_RS13325 IPR007351 Uncharacterised protein YjbR RY45_RS13330 IPR000182 GNAT domain RY45_RS13330 IPR016181 Acyl-CoA N-acyltransferase RY45_RS13335 IPR020979 Uncharacterised protein family A0KLC6 RY45_RS13345 IPR002569 Peptide methionine sulphoxide reductase MsrA RY45_RS13345 IPR028427 Peptide methionine sulfoxide reductase RY45_RS13350 IPR000182 GNAT domain RY45_RS13350 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS13350 IPR010167 Amino-acid N-acetyltransferase (ArgA) RY45_RS13350 IPR016181 Acyl-CoA N-acyltransferase RY45_RS13355 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS13355 IPR001341 Aspartate kinase domain RY45_RS13355 IPR005260 Aspartate kinase, monofunctional class RY45_RS13355 IPR018042 Aspartate kinase, conserved site RY45_RS13360 IPR011009 Protein kinase-like domain RY45_RS13365 IPR000917 Sulfatase RY45_RS13365 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS13365 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS13370 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RY45_RS13370 IPR027461 LD-carboxypeptidase A, C-terminal domain RY45_RS13370 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RY45_RS13370 IPR029062 Class I glutamine amidotransferase-like RY45_RS13375 IPR002641 Patatin/Phospholipase A2-related RY45_RS13375 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS13380 IPR009051 Alpha-helical ferredoxin RY45_RS13380 IPR014259 Sulphite reductase, subunit A RY45_RS13380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13385 IPR001221 Phenol hydroxylase reductase RY45_RS13385 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS13385 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit RY45_RS13385 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS13385 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain RY45_RS13390 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RY45_RS13390 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RY45_RS13390 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RY45_RS13390 IPR014261 Sulphite reductase, subunit C RY45_RS13390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13395 IPR000878 Tetrapyrrole methylase RY45_RS13395 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RY45_RS13395 IPR006367 Sirohaem synthase, N-terminal RY45_RS13395 IPR012409 Sirohaem synthase RY45_RS13395 IPR014776 Tetrapyrrole methylase, subdomain 2 RY45_RS13395 IPR014777 Tetrapyrrole methylase, subdomain 1 RY45_RS13395 IPR016040 NAD(P)-binding domain RY45_RS13395 IPR019478 Sirohaem synthase, dimerisation domain RY45_RS13395 IPR028281 Siroheme synthase, central domain RY45_RS13405 IPR002765 Uncharacterised protein family UPF0145 RY45_RS13415 IPR008414 Hemolysin BL-binding component RY45_RS13425 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS13430 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RY45_RS13430 IPR022987 Uncharacterised protein family UPF0227 RY45_RS13435 IPR006042 Xanthine/uracil permease RY45_RS13435 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS13435 IPR017588 Xanthine permease RY45_RS13440 IPR001567 Peptidase M3A/M3B RY45_RS13440 IPR013647 Oligopeptidase F, N-terminal domain RY45_RS13440 IPR024079 Metallopeptidase, catalytic domain RY45_RS13445 IPR001567 Peptidase M3A/M3B RY45_RS13445 IPR013647 Oligopeptidase F, N-terminal domain RY45_RS13450 IPR008526 Inner membrane protein YedI RY45_RS13455 IPR010323 Protein of unknown function DUF924 RY45_RS13455 IPR011990 Tetratricopeptide-like helical domain RY45_RS13460 IPR005665 Protein-export membrane protein SecF, bacterial RY45_RS13460 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RY45_RS13460 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RY45_RS13460 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RY45_RS13465 IPR005791 Protein translocase subunit SecD RY45_RS13465 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RY45_RS13465 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RY45_RS13465 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RY45_RS13465 IPR027398 SecD export protein N-terminal TM domain RY45_RS13475 IPR016875 Uncharacterised conserved protein UCP028200 RY45_RS13480 IPR002575 Aminoglycoside phosphotransferase RY45_RS13480 IPR011009 Protein kinase-like domain RY45_RS13485 IPR014094 Penicillin-binding protein activator LpoB RY45_RS13490 IPR010824 Protein of unknown function DUF1425 RY45_RS13495 IPR011990 Tetratricopeptide-like helical domain RY45_RS13500 IPR001310 Histidine triad (HIT) protein RY45_RS13500 IPR011146 HIT-like domain RY45_RS13500 IPR019808 Histidine triad, conserved site RY45_RS13505 IPR003660 HAMP linker domain RY45_RS13505 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13510 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RY45_RS13515 IPR002195 Dihydroorotase, conserved site RY45_RS13515 IPR006680 Amidohydrolase 1 RY45_RS13515 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS13515 IPR032466 RY45_RS13515 RY45_RS13530 IPR001991 Sodium:dicarboxylate symporter RY45_RS13530 IPR033380 RY45_RS13530 RY45_RS13535 IPR007318 Phospholipid methyltransferase RY45_RS13540 IPR000821 Alanine racemase RY45_RS13540 IPR001608 Alanine racemase, N-terminal RY45_RS13540 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RY45_RS13540 IPR011079 Alanine racemase, C-terminal RY45_RS13540 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RY45_RS13540 IPR029066 PLP-binding barrel RY45_RS13545 IPR005496 Integral membrane protein TerC RY45_RS13545 IPR022369 Integral membrane protein TerC, riboswitch-linked RY45_RS13550 IPR003439 ABC transporter-like RY45_RS13550 IPR003593 AAA+ ATPase domain RY45_RS13550 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS13550 IPR017871 ABC transporter, conserved site RY45_RS13550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13555 IPR003439 ABC transporter-like RY45_RS13555 IPR003593 AAA+ ATPase domain RY45_RS13555 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS13555 IPR017871 ABC transporter, conserved site RY45_RS13555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13560 IPR000515 MetI-like domain RY45_RS13560 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RY45_RS13565 IPR000515 MetI-like domain RY45_RS13570 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS13570 IPR030678 RY45_RS13570 RY45_RS13575 IPR002771 Multiple antibiotic resistance (MarC)-related RY45_RS13580 IPR018724 2OG-Fe dioxygenase RY45_RS13585 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS13585 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase RY45_RS13585 IPR015590 Aldehyde dehydrogenase domain RY45_RS13585 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS13585 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS13585 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS13585 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS13590 IPR003607 HD/PDEase domain RY45_RS13590 IPR006674 HD domain RY45_RS13590 IPR006675 Uncharacterised domain HDIG RY45_RS13590 IPR021812 Protein of unknown function DUF3391 RY45_RS13595 IPR003018 GAF domain RY45_RS13595 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS13595 IPR010559 Signal transduction histidine kinase, internal region RY45_RS13595 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RY45_RS13595 IPR029016 GAF domain-like RY45_RS13600 IPR001789 Signal transduction response regulator, receiver domain RY45_RS13600 IPR007492 LytTR DNA-binding domain RY45_RS13600 IPR011006 CheY-like superfamily RY45_RS13605 IPR003706 Carbon starvation protein CstA RY45_RS13605 IPR025299 CstA C-terminal domain RY45_RS13610 IPR011223 Uncharacterised conserved protein UCP028770 RY45_RS13615 IPR006143 RND efflux pump, membrane fusion protein RY45_RS13615 IPR032317 RY45_RS13615 RY45_RS13620 IPR001650 Helicase, C-terminal RY45_RS13620 IPR006935 Helicase/UvrB domain RY45_RS13620 IPR011332 Zinc-binding ribosomal protein RY45_RS13620 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13625 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C RY45_RS13625 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS13630 IPR002109 Glutaredoxin RY45_RS13630 IPR011767 Glutaredoxin active site RY45_RS13630 IPR011902 Glutaredoxin, GrxA RY45_RS13630 IPR012336 Thioredoxin-like fold RY45_RS13630 IPR014025 Glutaredoxin subgroup RY45_RS13635 IPR023387 DUF1653-like domain RY45_RS13640 IPR004839 Aminotransferase, class I/classII RY45_RS13640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS13640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS13640 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS13645 IPR018385 C4-dicarboxylate anaerobic carrier-like RY45_RS13650 IPR010758 Trans-2-enoyl-CoA reductase RY45_RS13650 IPR016040 NAD(P)-binding domain RY45_RS13650 IPR024906 Enoyl reductase FAD binding domain RY45_RS13650 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative RY45_RS13655 IPR000014 PAS domain RY45_RS13655 IPR001610 PAC motif RY45_RS13655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13655 IPR013655 PAS fold-3 RY45_RS13665 IPR000620 Drug/metabolite transporter RY45_RS13670 IPR003667 Electron transport complex, Rnf/Nqr RY45_RS13670 IPR011293 Electron transport complex, RnfA RY45_RS13675 IPR007202 4Fe-4S domain RY45_RS13675 IPR010207 Electron transport complex, RnfB RY45_RS13675 IPR016463 Electron transport complex, RnfB, Proteobacteria RY45_RS13675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13680 IPR009051 Alpha-helical ferredoxin RY45_RS13680 IPR010208 Electron transport complex protein RnfC RY45_RS13680 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RY45_RS13680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13680 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13680 IPR019554 Soluble ligand binding domain RY45_RS13680 IPR026902 RnfC Barrel sandwich hybrid domain RY45_RS13685 IPR004338 NADH-quinone reductase NQR2/RnfD RY45_RS13685 IPR011303 Electron transport complex, RnfD RY45_RS13690 IPR007329 FMN-binding RY45_RS13690 IPR010209 Electron transport complex, RnfG RY45_RS13695 IPR003667 Electron transport complex, Rnf/Nqr RY45_RS13695 IPR010968 Electron transport complex, RnfE RY45_RS13700 IPR000445 Helix-hairpin-helix motif RY45_RS13700 IPR003265 HhH-GPD domain RY45_RS13700 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RY45_RS13700 IPR004035 Endonuclease III, iron-sulphur binding site RY45_RS13700 IPR004036 Endonuclease III-like, conserved site-2 RY45_RS13700 IPR005759 Endonuclease III RY45_RS13700 IPR011257 DNA glycosylase RY45_RS13700 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RY45_RS13705 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS13705 IPR004361 Glyoxalase I RY45_RS13705 IPR018146 Glyoxalase I, conserved site RY45_RS13705 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS13710 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS13715 IPR003660 HAMP linker domain RY45_RS13715 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13715 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS13715 IPR013587 Nitrate/nitrite sensing protein RY45_RS13720 IPR005987 Ribonuclease T RY45_RS13720 IPR012337 Ribonuclease H-like domain RY45_RS13720 IPR013520 Exonuclease, RNase T/DNA polymerase III RY45_RS13725 IPR001991 Sodium:dicarboxylate symporter RY45_RS13725 IPR018461 Na+/H+ antiporter, NhaC-like RY45_RS13725 IPR032813 RY45_RS13725 RY45_RS13730 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS13730 IPR001650 Helicase, C-terminal RY45_RS13730 IPR005580 DbpA, RNA-binding RY45_RS13730 IPR011545 DEAD/DEAH box helicase domain RY45_RS13730 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS13730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS13730 IPR028618 ATP-dependent RNA helicase DeaD RY45_RS13735 IPR003736 Phenylacetic acid degradation-related domain RY45_RS13735 IPR006683 Thioesterase superfamily RY45_RS13735 IPR029069 HotDog domain RY45_RS13745 IPR004113 FAD-linked oxidase, C-terminal RY45_RS13745 IPR006094 FAD linked oxidase, N-terminal RY45_RS13745 IPR009051 Alpha-helical ferredoxin RY45_RS13745 IPR016164 FAD-linked oxidase-like, C-terminal RY45_RS13745 IPR016166 FAD-binding, type 2 RY45_RS13745 IPR016167 FAD-binding, type 2, subdomain 1 RY45_RS13745 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS13745 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS13745 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS13750 IPR002524 Cation efflux protein RY45_RS13750 IPR027469 Cation efflux protein transmembrane domain RY45_RS13755 IPR000644 CBS domain RY45_RS13755 IPR005170 Transporter-associated domain RY45_RS13755 IPR005496 Integral membrane protein TerC RY45_RS13755 IPR016166 FAD-binding, type 2 RY45_RS13755 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS13760 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RY45_RS13760 IPR013785 Aldolase-type TIM barrel RY45_RS13765 IPR001365 Adenosine/AMP deaminase domain RY45_RS13765 IPR006330 Adenosine/adenine deaminase RY45_RS13765 IPR028892 Adenine deaminase type 2 RY45_RS13765 IPR032466 RY45_RS13765 RY45_RS13770 IPR006357 HAD-superfamily hydrolase, subfamily IIA RY45_RS13770 IPR023214 HAD-like domain RY45_RS13770 IPR023215 Nitrophenylphosphatase-like domain RY45_RS13775 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS13775 IPR006153 Cation/H+ exchanger RY45_RS13775 IPR016040 NAD(P)-binding domain RY45_RS13780 IPR008579 Domain of unknown function DUF861, cupin-3 RY45_RS13780 IPR011051 RmlC-like cupin domain RY45_RS13780 IPR014710 RmlC-like jelly roll fold RY45_RS13785 IPR001962 Asparagine synthase RY45_RS13785 IPR006426 Asparagine synthase, glutamine-hydrolyzing RY45_RS13785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS13785 IPR017932 Glutamine amidotransferase type 2 domain RY45_RS13785 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS13790 IPR012336 Thioredoxin-like fold RY45_RS13795 IPR004045 Glutathione S-transferase, N-terminal RY45_RS13795 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS13795 IPR012336 Thioredoxin-like fold RY45_RS13800 IPR004045 Glutathione S-transferase, N-terminal RY45_RS13800 IPR004046 Glutathione S-transferase, C-terminal RY45_RS13800 IPR005955 Maleylacetoacetate isomerase RY45_RS13800 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS13800 IPR012336 Thioredoxin-like fold RY45_RS13805 IPR011234 Fumarylacetoacetase, C-terminal-related RY45_RS13810 IPR005708 Homogentisate 1,2-dioxygenase RY45_RS13810 IPR011051 RmlC-like cupin domain RY45_RS13810 IPR014710 RmlC-like jelly roll fold RY45_RS13815 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS13815 IPR005956 4-hydroxyphenylpyruvate dioxygenase RY45_RS13815 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS13820 IPR023214 HAD-like domain RY45_RS13825 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS13825 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RY45_RS13825 IPR006508 Pseudouridine synthase, RluA-like RY45_RS13825 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS13830 IPR000160 GGDEF domain RY45_RS13830 IPR015168 SsuA/THI5-like RY45_RS13830 IPR027939 NMT1/THI5 family RY45_RS13830 IPR029787 Nucleotide cyclase RY45_RS13835 IPR000014 PAS domain RY45_RS13835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS13835 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS13835 IPR013655 PAS fold-3 RY45_RS13840 IPR010333 Bacterial virulence RY45_RS13840 IPR029058 Alpha/Beta hydrolase fold RY45_RS13845 IPR016181 Acyl-CoA N-acyltransferase RY45_RS13845 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RY45_RS13845 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 RY45_RS13850 IPR000917 Sulfatase RY45_RS13850 IPR012549 Domain of unknown function DUF1705 RY45_RS13850 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS13850 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS13855 IPR007136 Protein of unknown function DUF347 RY45_RS13860 IPR005829 Sugar transporter, conserved site RY45_RS13860 IPR011701 Major facilitator superfamily RY45_RS13860 IPR020846 Major facilitator superfamily domain RY45_RS13865 IPR012842 Type III secretion system HrpE/YscL RY45_RS13865 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RY45_RS13875 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ RY45_RS13875 IPR006182 Secretory protein YscJ/FliF RY45_RS13880 IPR012670 Type III secretion system, YscI/HrpB RY45_RS13885 IPR013349 Type III secretion system effector YopR RY45_RS13890 IPR013348 Type III secretion system YscG RY45_RS13895 IPR011841 Type III secretion system, needle protein RY45_RS13895 IPR021123 Type III secretion, needle-protein-like RY45_RS13900 IPR012671 Type III secretion system, secretion protein E RY45_RS13905 IPR008984 SMAD/FHA domain RY45_RS13905 IPR012843 Type III secretion system YscD/HrpQ RY45_RS13905 IPR032030 RY45_RS13905 RY45_RS13905 IPR032034 RY45_RS13905 RY45_RS13910 IPR003522 Type III secretion system outer membrane pore YscC/HrcC RY45_RS13910 IPR004845 Type II secretion system GspD, conserved site RY45_RS13910 IPR004846 Type II/III secretion system RY45_RS13910 IPR005644 NolW-like RY45_RS13915 IPR010261 Tir chaperone protein (CesT) family RY45_RS13915 IPR013353 Type III secretion system chaperone YscB RY45_RS13920 IPR031835 RY45_RS13920 RY45_RS13925 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS13925 IPR009057 Homeodomain-like RY45_RS13925 IPR018060 DNA binding HTH domain, AraC-type RY45_RS13925 IPR018062 HTH domain AraC-type, conserved site RY45_RS13925 IPR020449 Transcription regulator HTH, AraC- type RY45_RS13930 IPR013400 Type III secretion system chaperone, YscW RY45_RS13940 IPR010261 Tir chaperone protein (CesT) family RY45_RS13945 IPR008898 YopD-like RY45_RS13950 IPR006972 Secretion system effector C, SseC-like RY45_RS13955 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RY45_RS13955 IPR011990 Tetratricopeptide-like helical domain RY45_RS13955 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup RY45_RS13960 IPR005413 Low calcium response V antigen RY45_RS13965 IPR009863 Type III secretion protein, LcrG RY45_RS13975 IPR001712 Type III secretion system FHIPEP RY45_RS13975 IPR006302 Type III secretion protein HrcV RY45_RS13975 IPR025505 FHIPEP conserved site RY45_RS13980 IPR011990 Tetratricopeptide-like helical domain RY45_RS13980 IPR016684 Type III secretion system chaperone, YscY RY45_RS13985 IPR012672 Type III secretion system YscX RY45_RS13990 IPR012673 Type III secretion system chaperone SycN RY45_RS13995 IPR013351 Type III secretion system effector delivery regulator TyeA-related RY45_RS13995 IPR015144 Type III secretion system effector delivery regulator TyeA RY45_RS14000 IPR010812 Hypersensitivity response secretion-like, HrpJ RY45_RS14000 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC RY45_RS14005 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS14005 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RY45_RS14005 IPR003593 AAA+ ATPase domain RY45_RS14005 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RY45_RS14005 IPR005714 ATPase, type III secretion system, FliI/YscN RY45_RS14005 IPR013380 ATPase, type III secretion system, H+-transporting RY45_RS14005 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RY45_RS14005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14010 IPR009929 Type III secretion sytem,YscO RY45_RS14015 IPR013354 Type III secretion system needle length determinant, C-terminal domain RY45_RS14020 IPR001543 Surface presentation of antigen (SpoA) RY45_RS14020 IPR003283 Type III secretion system outer membrane, SpaO RY45_RS14025 IPR005773 Yop virulence translocation protein R RY45_RS14025 IPR005838 Type III secretion system inner membrane P protein RY45_RS14030 IPR002191 Bacterial export protein family 3 RY45_RS14030 IPR006306 Type III secretion protein HrpO RY45_RS14035 IPR002010 Type III secretion system inner membrane R protein RY45_RS14035 IPR006304 Type III secretion protein SpaR/YscT RY45_RS14040 IPR006135 Type III secretion system substrate exporter RY45_RS14040 IPR006307 Type III exporter system, secretion apparatus protein BsaZ RY45_RS14040 IPR029025 Type III secretion system substrate exporter, C-terminal RY45_RS14055 IPR006214 Bax inhibitor 1-related RY45_RS14060 IPR010019 Integral membrane protein, YccS RY45_RS14060 IPR010020 Integral membrane protein, YccS/YhfK RY45_RS14060 IPR032692 RY45_RS14060 RY45_RS14065 IPR007453 Sulphur transfer protein DsrC/TusE RY45_RS14065 IPR025526 DsrC-like domain RY45_RS14070 IPR007730 Sporulation-related domain RY45_RS14075 IPR001645 Folylpolyglutamate synthetase RY45_RS14075 IPR004101 Mur ligase, C-terminal RY45_RS14075 IPR013221 Mur ligase, central RY45_RS14075 IPR018109 Folylpolyglutamate synthetase, conserved site RY45_RS14080 IPR000022 Carboxyl transferase RY45_RS14080 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RY45_RS14080 IPR029045 ClpP/crotonase-like domain RY45_RS14085 IPR001406 Pseudouridine synthase I, TruA RY45_RS14085 IPR020094 Pseudouridine synthase I, TruA, N-terminal RY45_RS14085 IPR020095 Pseudouridine synthase I, TruA, C-terminal RY45_RS14085 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RY45_RS14085 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS14090 IPR020011 Motility protein FimV, C-terminal RY45_RS14090 IPR020012 Motility protein FimV, N-terminal RY45_RS14095 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RY45_RS14095 IPR000534 Semialdehyde dehydrogenase, NAD-binding RY45_RS14095 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type RY45_RS14095 IPR012080 Aspartate-semialdehyde dehydrogenase RY45_RS14095 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RY45_RS14095 IPR016040 NAD(P)-binding domain RY45_RS14100 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY45_RS14100 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS14100 IPR016040 NAD(P)-binding domain RY45_RS14100 IPR020921 Erythronate-4-phosphate dehydrogenase RY45_RS14100 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain RY45_RS14105 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RY45_RS14110 IPR004872 Lipoprotein NlpA family RY45_RS14115 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS14115 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS14130 IPR000868 Isochorismatase-like RY45_RS14135 IPR000209 Peptidase S8/S53 domain RY45_RS14135 IPR002884 Proprotein convertase, P RY45_RS14135 IPR008979 Galactose-binding domain-like RY45_RS14135 IPR015500 Peptidase S8, subtilisin-related RY45_RS14135 IPR022398 Peptidase S8, subtilisin, His-active site RY45_RS14135 IPR023827 Peptidase S8, subtilisin, Asp-active site RY45_RS14135 IPR023828 Peptidase S8, subtilisin, Ser-active site RY45_RS14145 IPR001764 Glycoside hydrolase, family 3, N-terminal RY45_RS14145 IPR002772 Glycoside hydrolase family 3 C-terminal domain RY45_RS14145 IPR017853 Glycoside hydrolase, superfamily RY45_RS14145 IPR019800 Glycoside hydrolase, family 3, active site RY45_RS14145 IPR026891 Fibronectin type III-like domain RY45_RS14145 IPR026892 Glycoside hydrolase family 3 RY45_RS14150 IPR009057 Homeodomain-like RY45_RS14150 IPR018060 DNA binding HTH domain, AraC-type RY45_RS14150 IPR018062 HTH domain AraC-type, conserved site RY45_RS14150 IPR032687 RY45_RS14150 RY45_RS14155 IPR000121 PEP-utilising enzyme, C-terminal RY45_RS14155 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RY45_RS14155 IPR006319 Phosphoenolpyruvate synthase RY45_RS14155 IPR008279 PEP-utilising enzyme, mobile domain RY45_RS14155 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS14155 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS14155 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS14155 IPR018274 PEP-utilising enzyme, active site RY45_RS14155 IPR023151 PEP-utilising enzyme, conserved site RY45_RS14160 IPR005177 Bifunctional kinase-pyrophosphorylase RY45_RS14160 IPR026530 Phosphoenolpyruvate synthase regulatory protein RY45_RS14170 IPR002293 Amino acid/polyamine transporter I RY45_RS14170 IPR004840 Amino acid permease, conserved site RY45_RS14170 IPR004841 Amino acid permease/ SLC12A domain RY45_RS14175 IPR007497 Protein of unknown function DUF541 RY45_RS14195 IPR000160 GGDEF domain RY45_RS14195 IPR001633 EAL domain RY45_RS14195 IPR029787 Nucleotide cyclase RY45_RS14195 IPR032244 RY45_RS14195 RY45_RS14200 IPR010319 Transglutaminase-like cysteine peptidase, predicted RY45_RS14205 IPR003423 Outer membrane efflux protein RY45_RS14205 IPR010130 Type I secretion outer membrane protein, TolC RY45_RS14210 IPR003997 RTX secretion protein D, Gram-negative bacteria RY45_RS14210 IPR006144 Secretion protein HlyD, conserved site RY45_RS14210 IPR010129 Type I secretion membrane fusion protein, HlyD RY45_RS14215 IPR003439 ABC transporter-like RY45_RS14215 IPR003593 AAA+ ATPase domain RY45_RS14215 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS14215 IPR017871 ABC transporter, conserved site RY45_RS14215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14220 IPR005911 Conserved hypothetical protein CHP01212 RY45_RS14220 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS14220 IPR007197 Radical SAM RY45_RS14220 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS14220 IPR032432 RY45_RS14220 RY45_RS14230 IPR002489 Glutamate synthase, alpha subunit, C-terminal RY45_RS14230 IPR002932 Glutamate synthase domain RY45_RS14230 IPR006982 Glutamate synthase, central-N RY45_RS14230 IPR013785 Aldolase-type TIM barrel RY45_RS14230 IPR017932 Glutamine amidotransferase type 2 domain RY45_RS14230 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS14235 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 RY45_RS14235 IPR009051 Alpha-helical ferredoxin RY45_RS14235 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS14235 IPR028261 Dihydroprymidine dehydrogenase domain II RY45_RS14240 IPR003439 ABC transporter-like RY45_RS14240 IPR003593 AAA+ ATPase domain RY45_RS14240 IPR017871 ABC transporter, conserved site RY45_RS14240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14240 IPR030679 RY45_RS14240 RY45_RS14245 IPR000515 MetI-like domain RY45_RS14245 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS14250 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS14255 IPR009959 Polyketide cyclase SnoaL-like domain RY45_RS14255 IPR032710 RY45_RS14255 RY45_RS14260 IPR002935 O-methyltransferase, family 3 RY45_RS14260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS14265 IPR000551 MerR-type HTH domain RY45_RS14265 IPR009061 DNA binding domain, putative RY45_RS14265 IPR010211 Redox-sensitive transcriptional activator SoxR RY45_RS14265 IPR015358 Transcription regulator MerR, DNA binding RY45_RS14270 IPR025337 Domain of unknown function DUF4243 RY45_RS14280 IPR024079 Metallopeptidase, catalytic domain RY45_RS14280 IPR029463 Lysine-specific metallo-endopeptidase RY45_RS14285 IPR021316 Protein of unknown function DUF2913 RY45_RS14290 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS14290 IPR001650 Helicase, C-terminal RY45_RS14290 IPR011545 DEAD/DEAH box helicase domain RY45_RS14290 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS14290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14295 IPR000182 GNAT domain RY45_RS14295 IPR016181 Acyl-CoA N-acyltransferase RY45_RS14300 IPR032816 RY45_RS14300 RY45_RS14300 IPR032818 RY45_RS14300 RY45_RS14305 IPR003018 GAF domain RY45_RS14305 IPR007892 CHASE4 RY45_RS14305 IPR029016 GAF domain-like RY45_RS14310 IPR005546 Autotransporter beta-domain RY45_RS14315 IPR011528 Nuclease-related domain, NERD RY45_RS14315 IPR013498 DNA topoisomerase, type IA, zn finger RY45_RS14325 IPR011673 Protein of unknown function DUF1615 RY45_RS14330 IPR000891 Pyruvate carboxyltransferase RY45_RS14330 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RY45_RS14330 IPR005668 2-isopropylmalate synthase RY45_RS14330 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RY45_RS14330 IPR013785 Aldolase-type TIM barrel RY45_RS14335 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RY45_RS14335 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RY45_RS14335 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RY45_RS14335 IPR006275 Carbamoyl-phosphate synthase, large subunit RY45_RS14335 IPR011607 Methylglyoxal synthase-like domain RY45_RS14335 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS14335 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS14335 IPR016185 Pre-ATP-grasp domain RY45_RS14340 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain RY45_RS14340 IPR006274 Carbamoyl-phosphate synthase, small subunit RY45_RS14340 IPR017926 Glutamine amidotransferase RY45_RS14340 IPR029062 Class I glutamine amidotransferase-like RY45_RS14345 IPR000846 Dihydrodipicolinate reductase, N-terminal RY45_RS14345 IPR016040 NAD(P)-binding domain RY45_RS14345 IPR022663 Dihydrodipicolinate reductase, C-terminal RY45_RS14345 IPR022664 Dihydrodipicolinate reductase, conserved site RY45_RS14345 IPR023940 Dihydrodipicolinate reductase, bacterial RY45_RS14350 IPR018461 Na+/H+ antiporter, NhaC-like RY45_RS14355 IPR002698 5-formyltetrahydrofolate cyclo-ligase RY45_RS14355 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RY45_RS14360 IPR004788 Ribose 5-phosphate isomerase, type A RY45_RS14360 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RY45_RS14370 IPR002912 ACT domain RY45_RS14370 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY45_RS14370 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS14370 IPR016040 NAD(P)-binding domain RY45_RS14370 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 RY45_RS14370 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RY45_RS14370 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RY45_RS14375 IPR000829 Diacylglycerol kinase, prokaryotic RY45_RS14380 IPR006218 DAHP synthetase I/KDSA RY45_RS14380 IPR006219 DHAP synthase, class 1 RY45_RS14380 IPR013785 Aldolase-type TIM barrel RY45_RS14385 IPR000182 GNAT domain RY45_RS14385 IPR016181 Acyl-CoA N-acyltransferase RY45_RS14385 IPR024170 Aminoglycoside N6-acetyltransferase RY45_RS14390 IPR003439 ABC transporter-like RY45_RS14390 IPR003593 AAA+ ATPase domain RY45_RS14390 IPR017871 ABC transporter, conserved site RY45_RS14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14395 IPR000522 ABC transporter, permease protein RY45_RS14395 IPR029022 ABC transporter, BtuC-like RY45_RS14400 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS14405 IPR007437 Protein of unknown function DUF486 RY45_RS14410 IPR001482 Type II secretion system protein E RY45_RS14410 IPR003593 AAA+ ATPase domain RY45_RS14410 IPR006321 Pilus retraction protein PilT RY45_RS14410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14415 IPR005835 Nucleotidyl transferase RY45_RS14415 IPR005836 ADP-glucose pyrophosphorylase, conserved site RY45_RS14415 IPR011004 Trimeric LpxA-like RY45_RS14415 IPR011831 Glucose-1-phosphate adenylyltransferase RY45_RS14415 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial RY45_RS14415 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS14420 IPR011051 RmlC-like cupin domain RY45_RS14420 IPR014710 RmlC-like jelly roll fold RY45_RS14420 IPR027565 Cupin fold metalloprotein, WbuC family RY45_RS14425 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS14425 IPR015102 Transcriptional regulator HTH-type, FeoC RY45_RS14430 IPR003373 Ferrous iron transport protein B RY45_RS14430 IPR005225 Small GTP-binding protein domain RY45_RS14430 IPR006073 GTP binding domain RY45_RS14430 IPR011619 Ferrous iron transport protein B, N-terminal RY45_RS14430 IPR011640 Ferrous iron transport protein B, C-terminal RY45_RS14430 IPR011642 Nucleoside recognition Gate RY45_RS14430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14435 IPR007167 Ferrous iron transporter FeoA domain RY45_RS14435 IPR008988 Transcriptional repressor, C-terminal RY45_RS14440 IPR001950 Translation initiation factor SUI1 RY45_RS14440 IPR005872 Archaeal/bacterial translation initiation factor SUI1 RY45_RS14445 IPR001727 Uncharacterised protein family UPF0016 RY45_RS14450 IPR018677 Protein of unknown function DUF2157, membrane RY45_RS14455 IPR025513 Domain of unknown function DUF4401 RY45_RS14460 IPR025833 GDYXXLXY protein RY45_RS14465 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS14470 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS14475 IPR000160 GGDEF domain RY45_RS14475 IPR003018 GAF domain RY45_RS14475 IPR029016 GAF domain-like RY45_RS14475 IPR029787 Nucleotide cyclase RY45_RS14485 IPR000477 Reverse transcriptase domain RY45_RS14485 IPR003010 Carbon-nitrogen hydrolase RY45_RS14495 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS14495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS14495 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RY45_RS14495 IPR015803 Cysteine-tRNA ligase RY45_RS14495 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RY45_RS14495 IPR032678 RY45_RS14495 RY45_RS14500 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RY45_RS14500 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RY45_RS14500 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RY45_RS14500 IPR029000 Cyclophilin-like domain RY45_RS14505 IPR025365 Protein of unknown function DUF4269 RY45_RS14510 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS14510 IPR010138 UDP-2,3-diacylglucosamine hydrolase RY45_RS14510 IPR029052 Metallo-dependent phosphatase-like RY45_RS14515 IPR005614 NrfD family RY45_RS14515 IPR017566 NrfD RY45_RS14520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS14520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS14525 IPR010177 Doubled CXXCH motif RY45_RS14525 IPR011031 Multihaem cytochrome RY45_RS14525 IPR012286 Tetrahaem cytochrome domain RY45_RS14525 IPR023155 Cytochrome c-552/4 RY45_RS14530 IPR009056 Cytochrome c-like domain RY45_RS14530 IPR024167 Cytochrome c4 RY45_RS14535 IPR011031 Multihaem cytochrome RY45_RS14535 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC RY45_RS14540 IPR010177 Doubled CXXCH motif RY45_RS14540 IPR011031 Multihaem cytochrome RY45_RS14540 IPR020015 Decaheme cytochrome, c-type, DmsE RY45_RS14545 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB RY45_RS14550 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS14550 IPR009875 PilZ domain RY45_RS14555 IPR000014 PAS domain RY45_RS14555 IPR001610 PAC motif RY45_RS14555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS14555 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS14555 IPR013655 PAS fold-3 RY45_RS14575 IPR000462 CDP-alcohol phosphatidyltransferase RY45_RS14575 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RY45_RS14580 IPR000305 GIY-YIG nuclease superfamily RY45_RS14580 IPR001162 UvrC family homology region RY45_RS14580 IPR001943 UVR domain RY45_RS14580 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RY45_RS14580 IPR004791 UvrABC system, subunit C RY45_RS14580 IPR010994 RuvA domain 2-like RY45_RS14580 IPR027299 GIY-YIG domain RY45_RS14585 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS14585 IPR001789 Signal transduction response regulator, receiver domain RY45_RS14585 IPR011006 CheY-like superfamily RY45_RS14585 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS14585 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS14590 IPR003329 Acylneuraminate cytidylyltransferase RY45_RS14590 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RY45_RS14590 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS14595 IPR005651 Uncharacterised protein family UPF0434/Trm112 RY45_RS14600 IPR003758 Tetraacyldisaccharide 4'-kinase RY45_RS14600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14605 IPR003439 ABC transporter-like RY45_RS14605 IPR003593 AAA+ ATPase domain RY45_RS14605 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS14605 IPR011917 ABC transporter, lipid A export, MsbA RY45_RS14605 IPR017871 ABC transporter, conserved site RY45_RS14605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14610 IPR001279 Beta-lactamase-like RY45_RS14610 IPR004477 ComEC/Rec2-related protein RY45_RS14610 IPR004797 Competence protein ComEC/Rec2 RY45_RS14610 IPR025405 Domain of unknown function DUF4131 RY45_RS14615 IPR018639 Domain of unknown function DUF2062 RY45_RS14620 IPR018639 Domain of unknown function DUF2062 RY45_RS14625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14625 IPR033186 RY45_RS14625 RY45_RS14630 IPR010438 Bor RY45_RS14635 IPR010438 Bor RY45_RS14645 IPR009440 Plasmid segregation protein ParM/StbA RY45_RS14650 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS14650 IPR029058 Alpha/Beta hydrolase fold RY45_RS14655 IPR003439 ABC transporter-like RY45_RS14655 IPR003593 AAA+ ATPase domain RY45_RS14655 IPR005116 Transport-associated OB, type 1 RY45_RS14655 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS14655 IPR011868 Molybdate ABC transporter, ATP-binding protein RY45_RS14655 IPR017871 ABC transporter, conserved site RY45_RS14655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14660 IPR000515 MetI-like domain RY45_RS14660 IPR011867 Molybdate ABC transporter, permease protein RY45_RS14665 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RY45_RS14670 IPR003448 Molybdopterin biosynthesis MoaE RY45_RS14675 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RY45_RS14675 IPR010034 Molybdopterin converting factor, subunit 1 RY45_RS14675 IPR012675 Beta-grasp domain RY45_RS14675 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RY45_RS14680 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RY45_RS14680 IPR023045 Molybdenum cofactor biosynthesis C RY45_RS14680 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type RY45_RS14685 IPR001453 Molybdopterin binding domain RY45_RS14685 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RY45_RS14685 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria RY45_RS14690 IPR005126 NapC/NirT cytochrome c, N-terminal RY45_RS14690 IPR011031 Multihaem cytochrome RY45_RS14690 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT RY45_RS14690 IPR024717 Denitrification system component NapC/NirT/NrfH RY45_RS14695 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RY45_RS14695 IPR011031 Multihaem cytochrome RY45_RS14695 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain RY45_RS14700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS14700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS14705 IPR004494 MauM/NapG ferredoxin-type protein RY45_RS14705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS14705 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS14710 IPR006656 Molybdopterin oxidoreductase RY45_RS14710 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS14710 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS14710 IPR009010 Aspartate decarboxylase-like domain RY45_RS14710 IPR010051 Periplasmic nitrate reductase, large subunit RY45_RS14710 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RY45_RS14710 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RY45_RS14715 IPR005623 Chaperone NapD, nitrate reductase assembly RY45_RS14720 IPR004496 Ferredoxin-type protein NapF RY45_RS14720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS14720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS14725 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RY45_RS14725 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS14725 IPR007197 Radical SAM RY45_RS14725 IPR010505 Molybdenum cofactor synthesis C-terminal RY45_RS14725 IPR013483 Molybdenum cofactor biosynthesis protein A RY45_RS14725 IPR013785 Aldolase-type TIM barrel RY45_RS14730 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS14730 IPR003660 HAMP linker domain RY45_RS14730 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RY45_RS14730 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing RY45_RS14730 IPR029095 NarX-like, N-terminal RY45_RS14735 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS14735 IPR001789 Signal transduction response regulator, receiver domain RY45_RS14735 IPR011006 CheY-like superfamily RY45_RS14735 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS14735 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS14740 IPR003111 Peptidase S16, lon N-terminal RY45_RS14740 IPR015947 PUA-like domain RY45_RS14745 IPR000014 PAS domain RY45_RS14745 IPR001789 Signal transduction response regulator, receiver domain RY45_RS14745 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS14745 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS14745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS14745 IPR011006 CheY-like superfamily RY45_RS14745 IPR029016 GAF domain-like RY45_RS14750 IPR013702 FIST domain, N-terminal RY45_RS14750 IPR019494 FIST C domain RY45_RS14755 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RY45_RS14755 IPR010119 Gluconeogenesis factor RY45_RS14760 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RY45_RS14765 IPR026869 Putative glutamine amidotransferase type 2 RY45_RS14765 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS14770 IPR001347 Sugar isomerase (SIS) RY45_RS14770 IPR004515 Phosphoheptose isomerase RY45_RS14775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RY45_RS14775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RY45_RS14775 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RY45_RS14775 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RY45_RS14780 IPR003607 HD/PDEase domain RY45_RS14780 IPR006674 HD domain RY45_RS14780 IPR011006 CheY-like superfamily RY45_RS14780 IPR021800 Domain of unknown function DUF3369 RY45_RS14785 IPR000644 CBS domain RY45_RS14785 IPR006667 SLC41 divalent cation transporters, integral membrane domain RY45_RS14785 IPR006668 Magnesium transporter, MgtE intracellular domain RY45_RS14785 IPR006669 Magnesium transporter MgtE RY45_RS14790 IPR001029 Flagellin, D0/D1 domain RY45_RS14790 IPR013384 Flagellar hook-associated protein 3 RY45_RS14795 IPR002371 Flagellar hook-associated protein, FlgK RY45_RS14795 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS14800 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RY45_RS14800 IPR013377 Flagellar rod assembly protein/muramidase FlgJ RY45_RS14800 IPR019301 Flagellar protein FlgJ, N-terminal RY45_RS14800 IPR023346 Lysozyme-like domain RY45_RS14805 IPR001782 Flagellar P-ring protein RY45_RS14810 IPR000527 Flagellar L-ring protein RY45_RS14815 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS14815 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS14815 IPR012834 Flagellar basal-body rod FlgG RY45_RS14815 IPR019776 Flagellar basal body rod protein, conserved site RY45_RS14815 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS14820 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS14820 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS14820 IPR012836 Flagellar basal-body rod FlgF RY45_RS14820 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS14825 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS14825 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS14825 IPR011491 Flagellar basal body FlaE RY45_RS14825 IPR019776 Flagellar basal body rod protein, conserved site RY45_RS14825 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS14830 IPR005648 Flagellar hook capping protein RY45_RS14830 IPR025963 FlgD Tudor-like domain RY45_RS14830 IPR025965 FlgD Ig-like domain RY45_RS14835 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS14835 IPR006299 Flagellar basal-body rod protein FlgC RY45_RS14835 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS14835 IPR019776 Flagellar basal body rod protein, conserved site RY45_RS14840 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS14840 IPR006300 Flagellar basal-body rod protein FlgB RY45_RS14840 IPR019776 Flagellar basal body rod protein, conserved site RY45_RS14845 IPR000780 MCP methyltransferase, CheR-type RY45_RS14845 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal RY45_RS14845 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RY45_RS14845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS14850 IPR001789 Signal transduction response regulator, receiver domain RY45_RS14850 IPR002545 CheW-like protein RY45_RS14850 IPR011006 CheY-like superfamily RY45_RS14850 IPR024181 Chemotaxis response regulator CheV RY45_RS14855 IPR013974 SAF domain RY45_RS14855 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RY45_RS14860 IPR007412 Anti-sigma-28 factor, FlgM RY45_RS14860 IPR031316 RY45_RS14860 RY45_RS14865 IPR007809 FlgN-like domain RY45_RS14870 IPR000979 Phosphodiesterase MJ0936/Vps29 RY45_RS14870 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RY45_RS14870 IPR029052 Metallo-dependent phosphatase-like RY45_RS14875 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS14875 IPR030678 RY45_RS14875 RY45_RS14880 IPR000620 Drug/metabolite transporter RY45_RS14885 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RY45_RS14885 IPR002942 RNA-binding S4 domain RY45_RS14885 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS14885 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RY45_RS14885 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS14890 IPR003607 HD/PDEase domain RY45_RS14890 IPR006674 HD domain RY45_RS14890 IPR006675 Uncharacterised domain HDIG RY45_RS14890 IPR021812 Protein of unknown function DUF3391 RY45_RS14900 IPR001585 Transaldolase RY45_RS14900 IPR004731 Transaldolase 3A/3B RY45_RS14900 IPR013785 Aldolase-type TIM barrel RY45_RS14900 IPR018225 Transaldolase, active site RY45_RS14905 IPR001989 Radical-activating enzyme, conserved site RY45_RS14905 IPR007197 Radical SAM RY45_RS14905 IPR012839 Glycyl radical enzyme activase RY45_RS14910 IPR001150 Glycine radical domain RY45_RS14910 IPR004184 Pyruvate formate lyase domain RY45_RS14910 IPR005949 Formate acetyltransferase RY45_RS14910 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family RY45_RS14910 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RY45_RS14915 IPR001034 HTH DeoR N-terminal domain RY45_RS14915 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS14915 IPR014036 DeoR C-terminal sensor domain RY45_RS14915 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RY45_RS14920 IPR000620 Drug/metabolite transporter RY45_RS14925 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS14925 IPR030678 RY45_RS14925 RY45_RS14930 IPR021284 Protein of unknown function DUF2750 RY45_RS14940 IPR013468 Conserved hypothetical protein CHP02647 RY45_RS14950 IPR002059 Cold-shock protein, DNA-binding RY45_RS14950 IPR011129 Cold shock protein RY45_RS14950 IPR012156 Cold shock, CspA RY45_RS14950 IPR012340 Nucleic acid-binding, OB-fold RY45_RS14950 IPR019844 Cold-shock conserved site RY45_RS14955 IPR000089 Biotin/lipoyl attachment RY45_RS14955 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RY45_RS14955 IPR004167 E3 binding RY45_RS14955 IPR011053 Single hybrid motif RY45_RS14955 IPR023213 Chloramphenicol acetyltransferase-like domain RY45_RS14960 IPR005475 Transketolase-like, pyrimidine-binding domain RY45_RS14960 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS14960 IPR029061 Thiamin diphosphate-binding fold RY45_RS14960 IPR033247 RY45_RS14960 RY45_RS14960 IPR033248 RY45_RS14960 RY45_RS14965 IPR001017 Dehydrogenase, E1 component RY45_RS14965 IPR029061 Thiamin diphosphate-binding fold RY45_RS14970 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RY45_RS14970 IPR016681 Succinylglutamate desuccinylase RY45_RS14975 IPR009506 Protein of unknown function DUF1127 RY45_RS14980 IPR008865 DNA replication terminus site-binding protein RY45_RS14985 IPR000330 SNF2-related RY45_RS14985 IPR001650 Helicase, C-terminal RY45_RS14985 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS14985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS14990 IPR007432 Protein of unknown function DUF480 RY45_RS14990 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS14995 IPR007016 O-antigen ligase-related RY45_RS14995 IPR021797 Protein of unknown function DUF3366 RY45_RS14995 IPR031726 RY45_RS14995 RY45_RS15000 IPR003856 Lipopolysaccharide biosynthesis RY45_RS15000 IPR032807 RY45_RS15000 RY45_RS15010 IPR005835 Nucleotidyl transferase RY45_RS15010 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form RY45_RS15010 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS15015 IPR005913 dTDP-4-dehydrorhamnose reductase RY45_RS15015 IPR016040 NAD(P)-binding domain RY45_RS15015 IPR029903 RY45_RS15015 RY45_RS15020 IPR005888 dTDP-glucose 4,6-dehydratase RY45_RS15020 IPR016040 NAD(P)-binding domain RY45_RS15025 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RY45_RS15025 IPR016040 NAD(P)-binding domain RY45_RS15025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS15030 IPR003362 Bacterial sugar transferase RY45_RS15035 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS15035 IPR016040 NAD(P)-binding domain RY45_RS15040 IPR001296 Glycosyl transferase, family 1 RY45_RS15040 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RY45_RS15045 IPR001962 Asparagine synthase RY45_RS15045 IPR006426 Asparagine synthase, glutamine-hydrolyzing RY45_RS15045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS15045 IPR017932 Glutamine amidotransferase type 2 domain RY45_RS15045 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS15050 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS15050 IPR008089 Nucleotide sugar epimerase RY45_RS15050 IPR016040 NAD(P)-binding domain RY45_RS15055 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RY45_RS15055 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS15055 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RY45_RS15055 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RY45_RS15055 IPR016040 NAD(P)-binding domain RY45_RS15055 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RY45_RS15055 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RY45_RS15065 IPR003423 Outer membrane efflux protein RY45_RS15065 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RY45_RS15070 IPR001036 Acriflavin resistance protein RY45_RS15070 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RY45_RS15070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS15075 IPR006143 RND efflux pump, membrane fusion protein RY45_RS15075 IPR032317 RY45_RS15075 RY45_RS15080 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS15080 IPR009057 Homeodomain-like RY45_RS15080 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS15080 IPR013572 Transcription regulator MAATS, C-terminal RY45_RS15080 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS15080 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RY45_RS15085 IPR013216 Methyltransferase type 11 RY45_RS15085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS15090 IPR001991 Sodium:dicarboxylate symporter RY45_RS15095 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS15100 IPR003703 Acyl-CoA thioesterase RY45_RS15100 IPR029069 HotDog domain RY45_RS15105 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RY45_RS15105 IPR002942 RNA-binding S4 domain RY45_RS15105 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS15105 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RY45_RS15105 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS15110 IPR005234 Chromosome segregation/condensation protein ScpB RY45_RS15110 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS15115 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA RY45_RS15120 IPR006070 YrdC-like domain RY45_RS15120 IPR017945 DHBP synthase RibB-like alpha/beta domain RY45_RS15125 IPR003141 Polymerase/histidinol phosphatase, N-terminal RY45_RS15125 IPR004013 PHP, C-terminal RY45_RS15125 IPR016195 Polymerase/histidinol phosphatase-like RY45_RS15130 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial RY45_RS15130 IPR005801 ADC synthase RY45_RS15130 IPR006805 Anthranilate synthase component I, N-terminal RY45_RS15130 IPR015890 Chorismate binding, C-terminal RY45_RS15130 IPR019999 Anthranilate synthase component I - like RY45_RS15135 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RY45_RS15135 IPR017926 Glutamine amidotransferase RY45_RS15135 IPR029062 Class I glutamine amidotransferase-like RY45_RS15140 IPR000312 Glycosyl transferase, family 3 RY45_RS15140 IPR005940 Anthranilate phosphoribosyl transferase RY45_RS15140 IPR017459 Glycosyl transferase family 3, N-terminal domain RY45_RS15145 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RY45_RS15145 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RY45_RS15145 IPR011060 Ribulose-phosphate binding barrel RY45_RS15145 IPR013785 Aldolase-type TIM barrel RY45_RS15145 IPR013798 Indole-3-glycerol phosphate synthase RY45_RS15150 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS15150 IPR006653 Tryptophan synthase, beta chain, conserved site RY45_RS15150 IPR006654 Tryptophan synthase, beta chain RY45_RS15150 IPR023026 Tryptophan synthase beta chain/beta chain-like RY45_RS15155 IPR002028 Tryptophan synthase, alpha chain RY45_RS15155 IPR011060 Ribulose-phosphate binding barrel RY45_RS15155 IPR013785 Aldolase-type TIM barrel RY45_RS15155 IPR018204 Tryptophan synthase, alpha chain, active site RY45_RS15165 IPR007404 Protein of unknown function DUF457 RY45_RS15170 IPR021724 Protein of unknown function DUF3297 RY45_RS15175 IPR001064 Beta/gamma crystallin RY45_RS15175 IPR011024 Gamma-crystallin-related RY45_RS15180 IPR014453 Inhibitor of vertebrate lysozyme RY45_RS15185 IPR002668 Concentrative nucleoside transporter N-terminal domain RY45_RS15185 IPR008276 Concentrative nucleoside transporter RY45_RS15185 IPR011642 Nucleoside recognition Gate RY45_RS15185 IPR011657 Concentrative nucleoside transporter C-terminal domain RY45_RS15185 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial RY45_RS15190 IPR002035 von Willebrand factor, type A RY45_RS15190 IPR010221 VCBS repeat RY45_RS15195 IPR003848 Domain of unknown function DUF218 RY45_RS15195 IPR011990 Tetratricopeptide-like helical domain RY45_RS15195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS15200 IPR008523 Lactobacillus phage LBR48, DUF805 RY45_RS15205 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS15205 IPR029058 Alpha/Beta hydrolase fold RY45_RS15210 IPR011701 Major facilitator superfamily RY45_RS15210 IPR020846 Major facilitator superfamily domain RY45_RS15215 IPR000537 UbiA prenyltransferase family RY45_RS15215 IPR006369 Protohaem IX farnesyltransferase RY45_RS15215 IPR030470 RY45_RS15215 RY45_RS15220 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RY45_RS15220 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RY45_RS15225 IPR000298 Cytochrome c oxidase subunit III domain RY45_RS15225 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RY45_RS15225 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RY45_RS15225 IPR024791 Cytochrome c oxidase subunit III RY45_RS15230 IPR000883 Cytochrome c oxidase subunit I RY45_RS15230 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RY45_RS15230 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RY45_RS15230 IPR023616 Cytochrome c oxidase, subunit I domain RY45_RS15235 IPR002429 Cytochrome c oxidase subunit II C-terminal RY45_RS15235 IPR006333 Cytochrome o ubiquinol oxidase subunit II RY45_RS15235 IPR008972 Cupredoxin RY45_RS15235 IPR010514 COX aromatic rich motif RY45_RS15235 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RY45_RS15240 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS15245 IPR009056 Cytochrome c-like domain RY45_RS15245 IPR012286 Tetrahaem cytochrome domain RY45_RS15245 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit RY45_RS15250 IPR022090 Protein of unknown function DUF3634 RY45_RS15255 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RY45_RS15255 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RY45_RS15260 IPR010282 Uncharacterised protein family HutD/Ves RY45_RS15260 IPR011051 RmlC-like cupin domain RY45_RS15260 IPR014710 RmlC-like jelly roll fold RY45_RS15270 IPR000923 Blue (type 1) copper domain RY45_RS15270 IPR008972 Cupredoxin RY45_RS15270 IPR014068 Azurin, proteobacteria RY45_RS15275 IPR003374 ApbE-like domain RY45_RS15275 IPR024932 Flavin transferase ApbE RY45_RS15280 IPR005829 Sugar transporter, conserved site RY45_RS15280 IPR011701 Major facilitator superfamily RY45_RS15280 IPR020846 Major facilitator superfamily domain RY45_RS15285 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15285 IPR011006 CheY-like superfamily RY45_RS15285 IPR011990 Tetratricopeptide-like helical domain RY45_RS15285 IPR019734 Tetratricopeptide repeat RY45_RS15290 IPR001646 Pentapeptide repeat RY45_RS15290 IPR013099 Two pore domain potassium channel domain RY45_RS15295 IPR004808 AP endonuclease 1 RY45_RS15295 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS15295 IPR020847 AP endonuclease 1, binding site RY45_RS15300 IPR006143 RND efflux pump, membrane fusion protein RY45_RS15300 IPR032317 RY45_RS15300 RY45_RS15305 IPR001036 Acriflavin resistance protein RY45_RS15305 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RY45_RS15305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS15315 IPR006143 RND efflux pump, membrane fusion protein RY45_RS15315 IPR021647 Copper binding periplasmic protein CusF RY45_RS15315 IPR032317 RY45_RS15315 RY45_RS15320 IPR001036 Acriflavin resistance protein RY45_RS15320 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA RY45_RS15320 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS15325 IPR021647 Copper binding periplasmic protein CusF RY45_RS15335 IPR002129 Pyridoxal phosphate-dependent decarboxylase RY45_RS15335 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS15335 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS15340 IPR004143 Biotin/lipoate A/B protein ligase RY45_RS15340 IPR004562 Lipoyltransferase/lipoate-protein ligase RY45_RS15340 IPR019491 Lipoate protein ligase, C-terminal RY45_RS15340 IPR023741 Lipoate-protein ligase A RY45_RS15345 IPR000014 PAS domain RY45_RS15345 IPR000160 GGDEF domain RY45_RS15345 IPR001610 PAC motif RY45_RS15345 IPR012312 Haemerythrin/HHE cation-binding motif RY45_RS15345 IPR012827 Haemerythrin-like, metal-binding domain RY45_RS15345 IPR013656 PAS fold-4 RY45_RS15345 IPR015168 SsuA/THI5-like RY45_RS15345 IPR016131 Haemerythrin, iron-binding site RY45_RS15345 IPR027939 NMT1/THI5 family RY45_RS15345 IPR029787 Nucleotide cyclase RY45_RS15350 IPR001036 Acriflavin resistance protein RY45_RS15350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RY45_RS15355 IPR006143 RND efflux pump, membrane fusion protein RY45_RS15355 IPR032317 RY45_RS15355 RY45_RS15365 IPR007272 Sulphur transport domain RY45_RS15370 IPR001845 HTH ArsR-type DNA-binding domain RY45_RS15370 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS15375 IPR021309 Protein of unknown function DUF2892 RY45_RS15385 IPR003416 MgtC/SapB/SrpB transporter RY45_RS15390 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RY45_RS15390 IPR001623 DnaJ domain RY45_RS15390 IPR002939 Chaperone DnaJ, C-terminal RY45_RS15390 IPR008971 HSP40/DnaJ peptide-binding RY45_RS15390 IPR012724 Chaperone DnaJ RY45_RS15390 IPR018253 DnaJ domain, conserved site RY45_RS15395 IPR012725 Chaperone DnaK RY45_RS15395 IPR013126 Heat shock protein 70 family RY45_RS15395 IPR018181 Heat shock protein 70, conserved site RY45_RS15395 IPR029047 Heat shock protein 70kD, peptide-binding domain RY45_RS15395 IPR029048 Heat shock protein 70kD, C-terminal domain RY45_RS15400 IPR000740 GrpE nucleotide exchange factor RY45_RS15400 IPR009012 GrpE nucleotide exchange factor, head RY45_RS15400 IPR013805 GrpE nucleotide exchange factor, coiled-coil RY45_RS15405 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RY45_RS15405 IPR016064 ATP-NAD kinase-like domain RY45_RS15405 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RY45_RS15405 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RY45_RS15410 IPR003395 RecF/RecN/SMC, N-terminal RY45_RS15410 IPR004604 DNA recombination/repair protein RecN RY45_RS15410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15415 IPR001667 DDH domain RY45_RS15415 IPR004097 DHHA2 domain RY45_RS15420 IPR006016 UspA RY45_RS15420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS15425 IPR032317 RY45_RS15425 RY45_RS15430 IPR003439 ABC transporter-like RY45_RS15430 IPR003593 AAA+ ATPase domain RY45_RS15430 IPR003838 Permease FtsX-like RY45_RS15430 IPR017871 ABC transporter, conserved site RY45_RS15430 IPR025857 MacB-like periplasmic core domain RY45_RS15430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15435 IPR003423 Outer membrane efflux protein RY45_RS15435 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RY45_RS15440 IPR007037 Siderophore-interacting protein RY45_RS15440 IPR013113 FAD-binding 9, siderophore-interacting RY45_RS15440 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS15450 IPR006218 DAHP synthetase I/KDSA RY45_RS15450 IPR006219 DHAP synthase, class 1 RY45_RS15450 IPR013785 Aldolase-type TIM barrel RY45_RS15455 IPR001801 Histone-like protein H-NS RY45_RS15455 IPR027444 Histone-like protein H-NS, C-terminal domain RY45_RS15455 IPR027454 Histone-like protein H-NS family, oligomerisation domain RY45_RS15460 IPR000182 GNAT domain RY45_RS15460 IPR016181 Acyl-CoA N-acyltransferase RY45_RS15465 IPR013538 Activator of Hsp90 ATPase homologue 1-like RY45_RS15465 IPR023393 START-like domain RY45_RS15470 IPR008523 Lactobacillus phage LBR48, DUF805 RY45_RS15485 IPR006076 FAD dependent oxidoreductase RY45_RS15485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS15490 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS15490 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS15490 IPR011051 RmlC-like cupin domain RY45_RS15490 IPR013096 Cupin 2, conserved barrel RY45_RS15490 IPR014710 RmlC-like jelly roll fold RY45_RS15495 IPR010102 Succinate semialdehyde dehydrogenase RY45_RS15495 IPR015590 Aldehyde dehydrogenase domain RY45_RS15495 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS15495 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS15495 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS15495 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS15495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS15500 IPR004632 4-aminobutyrate aminotransferase, bacterial RY45_RS15500 IPR005814 Aminotransferase class-III RY45_RS15500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS15500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS15500 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS15505 IPR002293 Amino acid/polyamine transporter I RY45_RS15515 IPR002293 Amino acid/polyamine transporter I RY45_RS15525 IPR003841 Sodium-dependent phosphate transport protein RY45_RS15530 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RY45_RS15530 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RY45_RS15530 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RY45_RS15535 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RY45_RS15535 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type RY45_RS15540 IPR000014 PAS domain RY45_RS15540 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS15540 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15540 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS15540 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS15540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS15540 IPR011006 CheY-like superfamily RY45_RS15540 IPR013656 PAS fold-4 RY45_RS15540 IPR019594 Glutamate receptor, L-glutamate/glycine-binding RY45_RS15545 IPR000595 Cyclic nucleotide-binding domain RY45_RS15545 IPR014710 RmlC-like jelly roll fold RY45_RS15545 IPR018490 Cyclic nucleotide-binding-like RY45_RS15550 IPR011701 Major facilitator superfamily RY45_RS15550 IPR020846 Major facilitator superfamily domain RY45_RS15555 IPR000845 Nucleoside phosphorylase domain RY45_RS15555 IPR004402 Purine nucleoside phosphorylase DeoD-type RY45_RS15555 IPR018017 Nucleoside phosphorylase RY45_RS15570 IPR022548 Domain of unknown function DUF2846 RY45_RS15580 IPR003439 ABC transporter-like RY45_RS15580 IPR003593 AAA+ ATPase domain RY45_RS15580 IPR017871 ABC transporter, conserved site RY45_RS15580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15585 IPR027375 DKNYY family RY45_RS15590 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RY45_RS15590 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS15590 IPR004450 Threonine synthase-like RY45_RS15590 IPR029144 Threonine synthase, N-terminal RY45_RS15595 IPR000870 Homoserine kinase RY45_RS15595 IPR006203 GHMP kinase, ATP-binding, conserved site RY45_RS15595 IPR006204 GHMP kinase N-terminal domain RY45_RS15595 IPR013750 GHMP kinase, C-terminal domain RY45_RS15595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS15595 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS15600 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS15600 IPR001341 Aspartate kinase domain RY45_RS15600 IPR001342 Homoserine dehydrogenase, catalytic RY45_RS15600 IPR002912 ACT domain RY45_RS15600 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RY45_RS15600 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I RY45_RS15600 IPR016040 NAD(P)-binding domain RY45_RS15600 IPR018042 Aspartate kinase, conserved site RY45_RS15600 IPR019811 Homoserine dehydrogenase, conserved site RY45_RS15600 IPR027795 GATS-like ACT domain RY45_RS15605 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS15605 IPR004384 RNA methyltransferase TrmH, group 1 RY45_RS15605 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS15605 IPR029028 Alpha/beta knot methyltransferases RY45_RS15610 IPR010452 Isocitrate dehydrogenase kinasephosphatase RY45_RS15615 IPR005184 Domain of unknown function DUF306, Meta/HslJ RY45_RS15620 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS15625 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RY45_RS15625 IPR010203 Regulator of ribonuclease activity A RY45_RS15630 IPR021710 Protein of unknown function DUF3293 RY45_RS15635 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15635 IPR001867 Signal transduction response regulator, C-terminal RY45_RS15635 IPR011006 CheY-like superfamily RY45_RS15635 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS15635 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS15650 IPR003439 ABC transporter-like RY45_RS15650 IPR003593 AAA+ ATPase domain RY45_RS15650 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS15650 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RY45_RS15650 IPR017871 ABC transporter, conserved site RY45_RS15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15655 IPR003439 ABC transporter-like RY45_RS15655 IPR003593 AAA+ ATPase domain RY45_RS15655 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS15655 IPR017871 ABC transporter, conserved site RY45_RS15655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15660 IPR030852 RY45_RS15660 RY45_RS15665 IPR007438 Protein of unknown function DUF488 RY45_RS15670 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS15670 IPR016040 NAD(P)-binding domain RY45_RS15675 IPR023368 Uncharacterised protein family UPF0066, conserved site RY45_RS15675 IPR023370 TsaA-like domain RY45_RS15680 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RY45_RS15680 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RY45_RS15680 IPR016039 Thiolase-like RY45_RS15680 IPR018201 Beta-ketoacyl synthase, active site RY45_RS15685 IPR008912 Uncharacterised protein family CoxE-like RY45_RS15690 IPR001270 ClpA/B family RY45_RS15690 IPR003593 AAA+ ATPase domain RY45_RS15690 IPR003959 ATPase, AAA-type, core RY45_RS15690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15695 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RY45_RS15695 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS15695 IPR005856 Cysteine synthase K/M RY45_RS15695 IPR005859 Cysteine synthase A RY45_RS15700 IPR000032 Phosphocarrier HPr protein-like RY45_RS15700 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RY45_RS15700 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RY45_RS15705 IPR000121 PEP-utilising enzyme, C-terminal RY45_RS15705 IPR006318 Phosphoenolpyruvate-utilising enzyme RY45_RS15705 IPR008279 PEP-utilising enzyme, mobile domain RY45_RS15705 IPR008731 Phosphotransferase system, enzyme I N-terminal RY45_RS15705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS15705 IPR018274 PEP-utilising enzyme, active site RY45_RS15705 IPR023151 PEP-utilising enzyme, conserved site RY45_RS15705 IPR024692 Phosphotransferase system, enzyme I RY45_RS15710 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RY45_RS15710 IPR011055 Duplicated hybrid motif RY45_RS15715 IPR000014 PAS domain RY45_RS15715 IPR000160 GGDEF domain RY45_RS15715 IPR029787 Nucleotide cyclase RY45_RS15725 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RY45_RS15725 IPR016174 Di-haem cytochrome, transmembrane RY45_RS15730 IPR007607 Protein of unknown function DUF583 RY45_RS15735 IPR027050 Nuclease SbcCD subunit C RY45_RS15735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15745 IPR004593 Nuclease SbcCD subunit D RY45_RS15745 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS15745 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RY45_RS15745 IPR029052 Metallo-dependent phosphatase-like RY45_RS15750 IPR000182 GNAT domain RY45_RS15750 IPR016181 Acyl-CoA N-acyltransferase RY45_RS15755 IPR007476 Putative exonuclease, RdgC RY45_RS15760 IPR000101 Gamma-glutamyltranspeptidase RY45_RS15760 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS15765 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS15765 IPR006153 Cation/H+ exchanger RY45_RS15765 IPR016040 NAD(P)-binding domain RY45_RS15770 IPR007484 Peptidase M28 RY45_RS15770 IPR012189 Peptidase M28E, aminopeptidase AP1 RY45_RS15780 IPR001697 Pyruvate kinase RY45_RS15780 IPR011037 Pyruvate kinase-like, insert domain RY45_RS15780 IPR015793 Pyruvate kinase, barrel RY45_RS15780 IPR015794 Pyruvate kinase, alpha/beta RY45_RS15780 IPR015795 Pyruvate kinase, C-terminal RY45_RS15780 IPR015806 Pyruvate kinase, beta-barrel insert domain RY45_RS15780 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS15780 IPR018209 Pyruvate kinase, active site RY45_RS15785 IPR006685 Mechanosensitive ion channel MscS RY45_RS15785 IPR010920 Like-Sm (LSM) domain RY45_RS15785 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RY45_RS15785 IPR011066 Mechanosensitive ion channel MscS, C-terminal RY45_RS15785 IPR024393 Mechanosensitive ion channel MscS, porin domain RY45_RS15785 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RY45_RS15790 IPR012349 FMN-binding split barrel RY45_RS15795 IPR011045 Nitrous oxide reductase, N-terminal RY45_RS15795 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS15795 IPR019405 Lactonase, 7-bladed beta propeller RY45_RS15800 IPR006042 Xanthine/uracil permease RY45_RS15800 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS15805 IPR028992 Hedgehog/Intein (Hint) domain RY45_RS15805 IPR030934 RY45_RS15805 RY45_RS15810 IPR032635 RY45_RS15810 RY45_RS15815 IPR001891 Malic oxidoreductase RY45_RS15815 IPR012301 Malic enzyme, N-terminal domain RY45_RS15815 IPR012302 Malic enzyme, NAD-binding RY45_RS15815 IPR015884 Malic enzyme, conserved site RY45_RS15815 IPR016040 NAD(P)-binding domain RY45_RS15820 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15820 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS15820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS15820 IPR011006 CheY-like superfamily RY45_RS15825 IPR006471 Formate dehydrogenase, gamma subunit RY45_RS15825 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RY45_RS15825 IPR016174 Di-haem cytochrome, transmembrane RY45_RS15830 IPR000813 7Fe ferredoxin RY45_RS15830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS15830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS15835 IPR006656 Molybdopterin oxidoreductase RY45_RS15835 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS15835 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS15835 IPR009010 Aspartate decarboxylase-like domain RY45_RS15835 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RY45_RS15840 IPR014177 Formate dehydrogenase, TAT signal-containing RY45_RS15845 IPR020945 DMSO/Nitrate reductase chaperone RY45_RS15850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS15850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS15855 IPR021735 Protein of unknown function DUF3306 RY45_RS15860 IPR021736 Protein of unknown function DUF3305 RY45_RS15865 IPR003786 Protein FdhD RY45_RS15865 IPR016193 Cytidine deaminase-like RY45_RS15870 IPR010093 Excisionase/Xis, DNA-binding RY45_RS15870 IPR024370 PBP domain RY45_RS15875 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS15875 IPR003660 HAMP linker domain RY45_RS15875 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS15875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS15875 IPR029151 Periplasmic sensor domain-like RY45_RS15875 IPR033463 RY45_RS15875 RY45_RS15880 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15880 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS15880 IPR002197 DNA binding HTH domain, Fis-type RY45_RS15880 IPR003593 AAA+ ATPase domain RY45_RS15880 IPR009057 Homeodomain-like RY45_RS15880 IPR011006 CheY-like superfamily RY45_RS15880 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS15880 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS15880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15885 IPR024370 PBP domain RY45_RS15890 IPR000515 MetI-like domain RY45_RS15895 IPR003439 ABC transporter-like RY45_RS15895 IPR003593 AAA+ ATPase domain RY45_RS15895 IPR017871 ABC transporter, conserved site RY45_RS15895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15900 IPR013482 Molybdenum cofactor guanylyltransferase RY45_RS15900 IPR025877 MobA-like NTP transferase domain RY45_RS15900 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS15905 IPR001453 Molybdopterin binding domain RY45_RS15905 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RY45_RS15905 IPR005110 MoeA, N-terminal and linker domain RY45_RS15905 IPR005111 MoeA, C-terminal, domain IV RY45_RS15905 IPR008284 Molybdenum cofactor biosynthesis, conserved site RY45_RS15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS15910 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RY45_RS15915 IPR003607 HD/PDEase domain RY45_RS15915 IPR006674 HD domain RY45_RS15920 IPR021768 Protein of unknown function DUF3332 RY45_RS15925 IPR000014 PAS domain RY45_RS15925 IPR001610 PAC motif RY45_RS15925 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS15925 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS15925 IPR013655 PAS fold-3 RY45_RS15930 IPR000182 GNAT domain RY45_RS15930 IPR016181 Acyl-CoA N-acyltransferase RY45_RS15935 IPR032808 RY45_RS15935 RY45_RS15940 IPR018640 Protein of unknown function DUF2063 RY45_RS15945 IPR007801 Uncharacterised protein family UPF0276 RY45_RS15945 IPR013022 Xylose isomerase-like, TIM barrel domain RY45_RS15950 IPR018740 Protein of unknown function DUF2282, integral membrane RY45_RS15955 IPR019663 Uncharacterised protein YbfA RY45_RS15975 IPR000014 PAS domain RY45_RS15975 IPR001789 Signal transduction response regulator, receiver domain RY45_RS15975 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS15975 IPR003660 HAMP linker domain RY45_RS15975 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS15975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS15975 IPR011006 CheY-like superfamily RY45_RS15980 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS15980 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site RY45_RS15980 IPR030678 RY45_RS15980 RY45_RS15985 IPR000515 MetI-like domain RY45_RS15990 IPR000515 MetI-like domain RY45_RS15990 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RY45_RS15995 IPR003439 ABC transporter-like RY45_RS15995 IPR003593 AAA+ ATPase domain RY45_RS15995 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS15995 IPR017871 ABC transporter, conserved site RY45_RS15995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16000 IPR003439 ABC transporter-like RY45_RS16000 IPR003593 AAA+ ATPase domain RY45_RS16000 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS16000 IPR017871 ABC transporter, conserved site RY45_RS16000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16005 IPR001701 Glycoside hydrolase, family 9 RY45_RS16005 IPR004197 Glycoside hydrolase, family 9, N-terminal, Ig-like RY45_RS16005 IPR008928 Six-hairpin glycosidase-like RY45_RS16005 IPR012341 Six-hairpin glycosidase RY45_RS16005 IPR013783 Immunoglobulin-like fold RY45_RS16005 IPR014756 Immunoglobulin E-set RY45_RS16010 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RY45_RS16015 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS16015 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal RY45_RS16015 IPR015883 Glycoside hydrolase family 20, catalytic core RY45_RS16015 IPR017853 Glycoside hydrolase, superfamily RY45_RS16015 IPR025705 Beta-hexosaminidase RY45_RS16015 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like RY45_RS16020 IPR000014 PAS domain RY45_RS16020 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS16020 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS16020 IPR013655 PAS fold-3 RY45_RS16025 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16025 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RY45_RS16030 IPR000380 DNA topoisomerase, type IA RY45_RS16030 IPR003601 DNA topoisomerase, type IA, domain 2 RY45_RS16030 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RY45_RS16030 IPR005733 DNA topoisomerase I, bacterial-type RY45_RS16030 IPR006171 Toprim domain RY45_RS16030 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type RY45_RS16030 IPR013497 DNA topoisomerase, type IA, central RY45_RS16030 IPR013498 DNA topoisomerase, type IA, zn finger RY45_RS16030 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RY45_RS16030 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RY45_RS16030 IPR023405 DNA topoisomerase, type IA, core domain RY45_RS16030 IPR023406 DNA topoisomerase, type IA, active site RY45_RS16030 IPR028612 DNA topoisomerase I, type IA RY45_RS16035 IPR007079 Succinylarginine dihydrolase RY45_RS16040 IPR002142 Peptidase S49 RY45_RS16040 IPR013703 Peptidase S49, N-terminal proteobacteria RY45_RS16040 IPR029045 ClpP/crotonase-like domain RY45_RS16045 IPR002347 Glucose/ribitol dehydrogenase RY45_RS16045 IPR016040 NAD(P)-binding domain RY45_RS16045 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS16050 IPR000847 Transcription regulator HTH, LysR RY45_RS16050 IPR005119 LysR, substrate-binding RY45_RS16050 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16055 IPR011701 Major facilitator superfamily RY45_RS16055 IPR020846 Major facilitator superfamily domain RY45_RS16060 IPR004839 Aminotransferase, class I/classII RY45_RS16060 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS16060 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS16060 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS16060 IPR027619 Putative C-S lyase RY45_RS16065 IPR011852 TRAP transporter solute receptor, TAXI family RY45_RS16070 IPR000847 Transcription regulator HTH, LysR RY45_RS16070 IPR005119 LysR, substrate-binding RY45_RS16070 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16075 IPR001114 Adenylosuccinate synthetase RY45_RS16075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16080 IPR005247 YbhB/YbcL RY45_RS16080 IPR008914 Phosphatidylethanolamine-binding protein PEBP RY45_RS16085 IPR009057 Homeodomain-like RY45_RS16085 IPR018060 DNA binding HTH domain, AraC-type RY45_RS16090 IPR001661 Glycoside hydrolase, family 37 RY45_RS16090 IPR008928 Six-hairpin glycosidase-like RY45_RS16095 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS16095 IPR002305 Aminoacyl-tRNA synthetase, class Ic RY45_RS16095 IPR002307 Tyrosine-tRNA ligase RY45_RS16095 IPR002942 RNA-binding S4 domain RY45_RS16095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS16095 IPR024088 Tyrosine-tRNA ligase, bacterial-type RY45_RS16095 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RY45_RS16100 IPR007340 Opacity-associated protein A RY45_RS16100 IPR011055 Duplicated hybrid motif RY45_RS16100 IPR013731 Opacity-associated protein A, N-terminal RY45_RS16100 IPR016047 Peptidase M23 RY45_RS16105 IPR005338 Anhydro-N-acetylmuramic acid kinase RY45_RS16110 IPR002818 ThiJ/PfpI RY45_RS16110 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 RY45_RS16110 IPR029062 Class I glutamine amidotransferase-like RY45_RS16115 IPR006056 Enamine/imine deaminase YjgF-like RY45_RS16115 IPR006175 YjgF/Yer057p/UK114 family RY45_RS16115 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RY45_RS16125 IPR005474 Transketolase, N-terminal RY45_RS16125 IPR005475 Transketolase-like, pyrimidine-binding domain RY45_RS16125 IPR005478 Transketolase, bacterial-like RY45_RS16125 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS16125 IPR020826 Transketolase binding site RY45_RS16125 IPR029061 Thiamin diphosphate-binding fold RY45_RS16125 IPR033247 RY45_RS16125 RY45_RS16125 IPR033248 RY45_RS16125 RY45_RS16130 IPR002133 S-adenosylmethionine synthetase RY45_RS16130 IPR022628 S-adenosylmethionine synthetase, N-terminal RY45_RS16130 IPR022629 S-adenosylmethionine synthetase, central domain RY45_RS16130 IPR022630 S-adenosylmethionine synthetase, C-terminal RY45_RS16130 IPR022631 S-adenosylmethionine synthetase, conserved site RY45_RS16130 IPR022636 S-adenosylmethionine synthetase superfamily RY45_RS16135 IPR006640 Domain of unknown function SprT-like RY45_RS16135 IPR023483 Uncharacterised protein family SprT RY45_RS16140 IPR007346 Endonuclease I RY45_RS16145 IPR006700 Ribosomal RNA small subunit methyltransferase E RY45_RS16145 IPR015947 PUA-like domain RY45_RS16145 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS16145 IPR029028 Alpha/beta knot methyltransferases RY45_RS16150 IPR004215 Prokaryotic glutathione synthetase, N-terminal RY45_RS16150 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RY45_RS16150 IPR006284 Glutathione synthetase, prokaryotic RY45_RS16150 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS16150 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS16150 IPR016185 Pre-ATP-grasp domain RY45_RS16155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS16155 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS16155 IPR024478 4HB MCP domain RY45_RS16160 IPR003774 Protein of unknown function UPF0301 RY45_RS16165 IPR005227 Resolvase, holliday junction-type, YqgF-like RY45_RS16165 IPR006641 YqgF/RNase H-like domain RY45_RS16165 IPR012337 Ribonuclease H-like domain RY45_RS16170 IPR000109 Proton-dependent oligopeptide transporter family RY45_RS16170 IPR005279 Amino acid/peptide transporter family RY45_RS16170 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RY45_RS16170 IPR020846 Major facilitator superfamily domain RY45_RS16170 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B RY45_RS16175 IPR000847 Transcription regulator HTH, LysR RY45_RS16175 IPR005119 LysR, substrate-binding RY45_RS16175 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16185 IPR010438 Bor RY45_RS16190 IPR001466 Beta-lactamase-related RY45_RS16190 IPR001586 Beta-lactamase, class-C active site RY45_RS16190 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS16195 IPR011703 ATPase, AAA-3 RY45_RS16195 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RY45_RS16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16200 IPR002881 Domain of unknown function DUF58 RY45_RS16205 IPR002931 Transglutaminase-like RY45_RS16205 IPR021878 Protein of unknown function DUF3488 RY45_RS16210 IPR001463 Sodium:alanine symporter RY45_RS16215 IPR001585 Transaldolase RY45_RS16215 IPR004730 Transaldolase type 1 RY45_RS16215 IPR013785 Aldolase-type TIM barrel RY45_RS16215 IPR018225 Transaldolase, active site RY45_RS16220 IPR021932 Protein of unknown function DUF3545 RY45_RS16225 IPR012312 Haemerythrin/HHE cation-binding motif RY45_RS16230 IPR002043 Uracil-DNA glycosylase RY45_RS16230 IPR005122 Uracil-DNA glycosylase-like RY45_RS16230 IPR018085 Uracil-DNA glycosylase, active site RY45_RS16235 IPR001150 Glycine radical domain RY45_RS16235 IPR011140 Autonomous glycyl radical cofactor GrcA RY45_RS16235 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RY45_RS16240 IPR001991 Sodium:dicarboxylate symporter RY45_RS16240 IPR018107 Sodium:dicarboxylate symporter, conserved site RY45_RS16240 IPR023954 C4-dicarboxylate transport protein RY45_RS16245 IPR006218 DAHP synthetase I/KDSA RY45_RS16245 IPR006269 3-deoxy-8-phosphooctulonate synthase RY45_RS16245 IPR013785 Aldolase-type TIM barrel RY45_RS16250 IPR011990 Tetratricopeptide-like helical domain RY45_RS16250 IPR032698 RY45_RS16250 RY45_RS16255 IPR007360 Invasion gene expression up-regulator, SirB RY45_RS16260 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS16260 IPR004556 Modification methylase HemK RY45_RS16260 IPR007848 Methyltransferase small domain RY45_RS16260 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RY45_RS16260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS16265 IPR000352 Peptide chain release factor class I/class II RY45_RS16265 IPR004373 Peptide chain release factor 1 RY45_RS16265 IPR005139 Peptide chain release factor RY45_RS16265 IPR014720 Double-stranded RNA-binding domain RY45_RS16270 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RY45_RS16270 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RY45_RS16270 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RY45_RS16270 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RY45_RS16270 IPR016040 NAD(P)-binding domain RY45_RS16270 IPR018214 Glutamyl-tRNA reductase, conserved site RY45_RS16275 IPR004565 Outer membrane lipoprotein LolB RY45_RS16275 IPR029046 Lipoprotein localisation LolA/LolB/LppX RY45_RS16290 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RY45_RS16290 IPR005946 Ribose-phosphate diphosphokinase RY45_RS16290 IPR029057 Phosphoribosyltransferase-like RY45_RS16290 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RY45_RS16295 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS16295 IPR006179 5'-Nucleotidase/apyrase RY45_RS16295 IPR008334 5'-Nucleotidase, C-terminal RY45_RS16295 IPR029052 Metallo-dependent phosphatase-like RY45_RS16300 IPR001328 Peptidyl-tRNA hydrolase RY45_RS16300 IPR018171 Peptidyl-tRNA hydrolase, conserved site RY45_RS16305 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RY45_RS16305 IPR006073 GTP binding domain RY45_RS16305 IPR012675 Beta-grasp domain RY45_RS16305 IPR012676 TGS-like RY45_RS16305 IPR013029 Domain of unknown function DUF933 RY45_RS16305 IPR023192 TGS-like domain RY45_RS16305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16350 IPR004680 Citrate transporter-like domain RY45_RS16350 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS16350 IPR031312 RY45_RS16350 RY45_RS16355 IPR006419 Nicotinamide mononucleotide transporter PnuC RY45_RS16360 IPR000845 Nucleoside phosphorylase domain RY45_RS16360 IPR018017 Nucleoside phosphorylase RY45_RS16365 IPR000595 Cyclic nucleotide-binding domain RY45_RS16365 IPR014710 RmlC-like jelly roll fold RY45_RS16365 IPR018490 Cyclic nucleotide-binding-like RY45_RS16370 IPR007374 ASCH domain RY45_RS16370 IPR008314 Uncharacterised conserved protein UCP029143 RY45_RS16370 IPR015947 PUA-like domain RY45_RS16375 IPR012427 Protein of unknown function DUF1622 RY45_RS16380 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS16380 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS16380 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS16380 IPR015902 Glycoside hydrolase, family 13 RY45_RS16380 IPR017853 Glycoside hydrolase, superfamily RY45_RS16380 IPR022567 Domain of unknown function DUF3459 RY45_RS16390 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RY45_RS16390 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal RY45_RS16390 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS16390 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS16390 IPR011895 Pyruvate-flavodoxin oxidoreductase RY45_RS16390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS16390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS16390 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain RY45_RS16390 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RY45_RS16390 IPR029061 Thiamin diphosphate-binding fold RY45_RS16390 IPR033412 RY45_RS16390 RY45_RS16395 IPR011701 Major facilitator superfamily RY45_RS16395 IPR020846 Major facilitator superfamily domain RY45_RS16400 IPR006439 HAD hydrolase, subfamily IA RY45_RS16400 IPR010976 Beta-phosphoglucomutase hydrolase RY45_RS16400 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS16400 IPR023214 HAD-like domain RY45_RS16405 IPR024445 Transposase, ISXO2-like RY45_RS16410 IPR009770 Domain of unknown function DUF1338 RY45_RS16415 IPR015590 Aldehyde dehydrogenase domain RY45_RS16415 IPR016160 Aldehyde dehydrogenase, cysteine active site RY45_RS16415 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS16415 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS16415 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS16415 IPR017649 Succinylglutamic semialdehyde dehydrogenase RY45_RS16415 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS16420 IPR007041 Arginine N-succinyltransferase Ast/AOST RY45_RS16420 IPR016181 Acyl-CoA N-acyltransferase RY45_RS16420 IPR017650 Arginine N-succinyltransferase AstA RY45_RS16425 IPR004636 Acetylornithine/Succinylornithine transaminase family RY45_RS16425 IPR005814 Aminotransferase class-III RY45_RS16425 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS16425 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS16425 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS16425 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria RY45_RS16430 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RY45_RS16430 IPR017926 Glutamine amidotransferase RY45_RS16430 IPR029062 Class I glutamine amidotransferase-like RY45_RS16435 IPR007985 Haemolysin expression modulating, HHA RY45_RS16440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS16440 IPR002305 Aminoacyl-tRNA synthetase, class Ic RY45_RS16440 IPR002306 Tryptophan-tRNA ligase RY45_RS16440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS16440 IPR024109 Tryptophan-tRNA ligase, bacterial-type RY45_RS16445 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RY45_RS16445 IPR006439 HAD hydrolase, subfamily IA RY45_RS16445 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS16445 IPR023214 HAD-like domain RY45_RS16450 IPR000056 Ribulose-phosphate 3-epimerase-like RY45_RS16450 IPR011060 Ribulose-phosphate binding barrel RY45_RS16450 IPR013785 Aldolase-type TIM barrel RY45_RS16450 IPR026019 Ribulose-phosphate 3-epimerase RY45_RS16455 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS16455 IPR012263 Adenine modification methylase, M.EcoRV-type RY45_RS16455 IPR012327 D12 class N6 adenine-specific DNA methyltransferase RY45_RS16455 IPR023095 Adenine-specific methyltransferase, domain 2 RY45_RS16455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS16460 IPR007730 Sporulation-related domain RY45_RS16460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16465 IPR016037 3-dehydroquinate synthase AroB RY45_RS16465 IPR030960 RY45_RS16465 RY45_RS16465 IPR030963 RY45_RS16465 RY45_RS16470 IPR000623 Shikimate kinase/Threonine synthase-like 1 RY45_RS16470 IPR023000 Shikimate kinase, conserved site RY45_RS16470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16470 IPR031322 RY45_RS16470 RY45_RS16475 IPR001775 GspD/PilQ family RY45_RS16475 IPR004846 Type II/III secretion system RY45_RS16475 IPR005644 NolW-like RY45_RS16475 IPR011662 Secretin/TonB, short N-terminal RY45_RS16475 IPR013355 Type IV pilus secretin PilQ RY45_RS16480 IPR007446 Pilus assembly protein PilP RY45_RS16485 IPR007445 Pilus assembly protein, PilO RY45_RS16485 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RY45_RS16485 IPR023218 UPF0291 structural domain RY45_RS16490 IPR007813 Fimbrial assembly PilN RY45_RS16495 IPR003494 SHS2 domain inserted in FtsA RY45_RS16495 IPR005883 Type IV pilus assembly protein PilM RY45_RS16500 IPR001264 Glycosyl transferase, family 51 RY45_RS16500 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS16500 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS16500 IPR012340 Nucleic acid-binding, OB-fold RY45_RS16500 IPR023346 Lysozyme-like domain RY45_RS16500 IPR031376 RY45_RS16500 RY45_RS16505 IPR000847 Transcription regulator HTH, LysR RY45_RS16505 IPR005119 LysR, substrate-binding RY45_RS16505 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16510 IPR003660 HAMP linker domain RY45_RS16510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS16510 IPR024478 4HB MCP domain RY45_RS16515 IPR012336 Thioredoxin-like fold RY45_RS16520 IPR001279 Beta-lactamase-like RY45_RS16525 IPR000847 Transcription regulator HTH, LysR RY45_RS16525 IPR005119 LysR, substrate-binding RY45_RS16525 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16540 IPR011055 Duplicated hybrid motif RY45_RS16540 IPR016047 Peptidase M23 RY45_RS16545 IPR002528 Multi antimicrobial extrusion protein RY45_RS16550 IPR006685 Mechanosensitive ion channel MscS RY45_RS16550 IPR006686 Mechanosensitive ion channel MscS, conserved site RY45_RS16550 IPR010920 Like-Sm (LSM) domain RY45_RS16550 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RY45_RS16550 IPR011066 Mechanosensitive ion channel MscS, C-terminal RY45_RS16550 IPR024393 Mechanosensitive ion channel MscS, porin domain RY45_RS16550 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RY45_RS16555 IPR004129 Glycerophosphoryl diester phosphodiesterase RY45_RS16555 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RY45_RS16555 IPR030395 RY45_RS16555 RY45_RS16560 IPR003660 HAMP linker domain RY45_RS16560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS16560 IPR029151 Periplasmic sensor domain-like RY45_RS16560 IPR033479 RY45_RS16560 RY45_RS16565 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RY45_RS16565 IPR003953 FAD binding domain RY45_RS16565 IPR005884 Fumarate reductase, flavoprotein subunit RY45_RS16565 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RY45_RS16565 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RY45_RS16565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS16565 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RY45_RS16565 IPR030664 RY45_RS16565 RY45_RS16570 IPR001041 2Fe-2S ferredoxin-type domain RY45_RS16570 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RY45_RS16570 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RY45_RS16570 IPR009051 Alpha-helical ferredoxin RY45_RS16570 IPR012675 Beta-grasp domain RY45_RS16570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS16570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS16570 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RY45_RS16575 IPR003510 Fumarate reductase, subunit C RY45_RS16580 IPR003418 Fumarate reductase, D subunit RY45_RS16590 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS16590 IPR009057 Homeodomain-like RY45_RS16590 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS16590 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS16600 IPR009351 Protein of unknown function DUF1006 RY45_RS16605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS16610 IPR016181 Acyl-CoA N-acyltransferase RY45_RS16610 IPR022050 Thermostable hemolysin RY45_RS16615 IPR000873 AMP-dependent synthetase/ligase RY45_RS16615 IPR020845 AMP-binding, conserved site RY45_RS16620 IPR016084 Haem oxygenase-like, multi-helical RY45_RS16620 IPR028201 PqqC-like protein RY45_RS16625 IPR002347 Glucose/ribitol dehydrogenase RY45_RS16625 IPR016040 NAD(P)-binding domain RY45_RS16625 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS16630 IPR011990 Tetratricopeptide-like helical domain RY45_RS16630 IPR019734 Tetratricopeptide repeat RY45_RS16635 IPR001789 Signal transduction response regulator, receiver domain RY45_RS16635 IPR001867 Signal transduction response regulator, C-terminal RY45_RS16635 IPR011006 CheY-like superfamily RY45_RS16635 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16640 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS16640 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS16640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS16640 IPR013727 Two-component sensor kinase N-terminal RY45_RS16645 IPR021109 Aspartic peptidase domain RY45_RS16650 IPR001093 IMP dehydrogenase/GMP reductase RY45_RS16650 IPR005993 Guanosine monophosphate reductase 1 RY45_RS16650 IPR013785 Aldolase-type TIM barrel RY45_RS16650 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RY45_RS16655 IPR016633 Uncharacterised conserved protein UCP015557 RY45_RS16660 IPR001059 Translation elongation factor P/YeiP, central RY45_RS16660 IPR008991 Translation protein SH3-like domain RY45_RS16660 IPR011768 Translation elongation factor P RY45_RS16660 IPR012340 Nucleic acid-binding, OB-fold RY45_RS16660 IPR013185 Translation elongation factor, KOW-like RY45_RS16660 IPR014722 Ribosomal protein L2 domain 2 RY45_RS16660 IPR015365 Elongation factor P, C-terminal RY45_RS16660 IPR020599 Translation elongation factor P/YeiP RY45_RS16665 IPR014509 Uncharacterised conserved protein UCP020606 RY45_RS16670 IPR022529 Protein of unknown function DUF3530 RY45_RS16675 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY45_RS16675 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS16675 IPR016040 NAD(P)-binding domain RY45_RS16675 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RY45_RS16685 IPR000160 GGDEF domain RY45_RS16685 IPR029787 Nucleotide cyclase RY45_RS16690 IPR000415 Nitroreductase-like RY45_RS16690 IPR029479 Nitroreductase RY45_RS16695 IPR006439 HAD hydrolase, subfamily IA RY45_RS16695 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS16695 IPR023214 HAD-like domain RY45_RS16705 IPR000847 Transcription regulator HTH, LysR RY45_RS16705 IPR005119 LysR, substrate-binding RY45_RS16705 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16710 IPR000014 PAS domain RY45_RS16710 IPR000160 GGDEF domain RY45_RS16710 IPR013656 PAS fold-4 RY45_RS16710 IPR029787 Nucleotide cyclase RY45_RS16715 IPR002059 Cold-shock protein, DNA-binding RY45_RS16715 IPR008613 Excalibur calcium-binding domain RY45_RS16715 IPR011129 Cold shock protein RY45_RS16715 IPR012340 Nucleic acid-binding, OB-fold RY45_RS16720 IPR000868 Isochorismatase-like RY45_RS16725 IPR002938 Monooxygenase, FAD-binding RY45_RS16725 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RY45_RS16725 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS16730 IPR002792 TRAM domain RY45_RS16730 IPR005839 Methylthiotransferase RY45_RS16730 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RY45_RS16730 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS16730 IPR007197 Radical SAM RY45_RS16730 IPR013848 Methylthiotransferase, N-terminal RY45_RS16730 IPR020612 Methylthiotransferase, conserved site RY45_RS16730 IPR023404 Radical SAM, alpha/beta horseshoe RY45_RS16730 IPR023970 Methylthiotransferase/radical SAM-type protein RY45_RS16735 IPR003714 PhoH-like protein RY45_RS16735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16740 IPR002036 Endoribonuclease YbeY RY45_RS16740 IPR020549 Endoribonuclease YbeY, conserved site RY45_RS16740 IPR023091 Metalloprotease catalytic domain, predicted RY45_RS16745 IPR000644 CBS domain RY45_RS16745 IPR005170 Transporter-associated domain RY45_RS16745 IPR016166 FAD-binding, type 2 RY45_RS16745 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS16750 IPR003010 Carbon-nitrogen hydrolase RY45_RS16750 IPR004563 Apolipoprotein N-acyltransferase RY45_RS16755 IPR009912 Protein of unknown function DUF1451 RY45_RS16760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS16760 IPR002300 Aminoacyl-tRNA synthetase, class Ia RY45_RS16760 IPR002302 Leucine-tRNA ligase RY45_RS16760 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RY45_RS16760 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS16760 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RY45_RS16760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS16760 IPR025709 Leucyl-tRNA synthetase, editing domain RY45_RS16765 IPR007485 Lipopolysaccharide assembly, LptE RY45_RS16770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16775 IPR005790 DNA polymerase III, delta subunit RY45_RS16775 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RY45_RS16775 IPR010372 DNA polymerase III, delta RY45_RS16775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16775 IPR032780 RY45_RS16775 RY45_RS16780 IPR004821 Cytidyltransferase-like domain RY45_RS16780 IPR005248 Probable nicotinate-nucleotide adenylyltransferase RY45_RS16780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS16785 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RY45_RS16790 IPR003742 SPOUT methyltransferase, predicted RY45_RS16790 IPR016051 Ribosomal RNA large subunit methyltransferase H RY45_RS16790 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS16790 IPR029028 Alpha/beta knot methyltransferases RY45_RS16795 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS16795 IPR005311 Penicillin-binding protein, dimerisation domain RY45_RS16795 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS16795 IPR017790 Penicillin-binding protein 2 RY45_RS16800 IPR001182 Cell cycle protein FtsW/RodA RY45_RS16800 IPR011923 Rod shape-determining protein RodA RY45_RS16800 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RY45_RS16805 IPR011757 Lytic transglycosylase MltB RY45_RS16805 IPR023346 Lysozyme-like domain RY45_RS16805 IPR031304 RY45_RS16805 RY45_RS16810 IPR007730 Sporulation-related domain RY45_RS16810 IPR009009 RlpA-like double-psi beta-barrel domain RY45_RS16810 IPR012997 Rare lipoprotein A, bacterial RY45_RS16815 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RY45_RS16815 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS16815 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RY45_RS16815 IPR015956 Penicillin-binding protein-associated RY45_RS16815 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RY45_RS16820 IPR007454 Uncharacterised protein family UPF0250 RY45_RS16820 IPR027471 YbeD-like domain RY45_RS16825 IPR000544 Octanoyltransferase RY45_RS16825 IPR004143 Biotin/lipoate A/B protein ligase RY45_RS16825 IPR020605 Octanoyltransferase, conserved site RY45_RS16830 IPR003698 Lipoyl synthase RY45_RS16830 IPR006638 Elongator protein 3/MiaB/NifB RY45_RS16830 IPR007197 Radical SAM RY45_RS16830 IPR013785 Aldolase-type TIM barrel RY45_RS16830 IPR031691 RY45_RS16830 RY45_RS16845 IPR003593 AAA+ ATPase domain RY45_RS16845 IPR008868 Bacterial TniB RY45_RS16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS16850 IPR001584 Integrase, catalytic core RY45_RS16850 IPR009057 Homeodomain-like RY45_RS16850 IPR012337 Ribonuclease H-like domain RY45_RS16850 IPR015378 Transposase-like, Mu, C-terminal RY45_RS16855 IPR014832 TnsA endonuclease C-terminal RY45_RS16855 IPR014833 TnsA endonuclease, N-terminal RY45_RS16860 IPR000182 GNAT domain RY45_RS16860 IPR016181 Acyl-CoA N-acyltransferase RY45_RS16865 IPR010662 Putative hydrolase RBBP9/YdeN RY45_RS16865 IPR029058 Alpha/Beta hydrolase fold RY45_RS16870 IPR003667 Electron transport complex, Rnf/Nqr RY45_RS16870 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit RY45_RS16880 IPR000182 GNAT domain RY45_RS16880 IPR016181 Acyl-CoA N-acyltransferase RY45_RS16885 IPR000551 MerR-type HTH domain RY45_RS16885 IPR009061 DNA binding domain, putative RY45_RS16885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS16890 IPR001667 DDH domain RY45_RS16890 IPR003156 DHHA1 domain RY45_RS16890 IPR004610 Bacterial RecJ exonuclease RY45_RS16895 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RY45_RS16895 IPR012336 Thioredoxin-like fold RY45_RS16895 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RY45_RS16900 IPR001185 Large-conductance mechanosensitive channel RY45_RS16900 IPR019823 Large-conductance mechanosensitive channel, conserved site RY45_RS16905 IPR002104 Integrase, catalytic RY45_RS16905 IPR004107 Integrase, SAM-like, N-terminal RY45_RS16905 IPR010998 Integrase, Lambda-type, N-terminal RY45_RS16905 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS16905 IPR011932 Tyrosine recombinase XerD RY45_RS16905 IPR013762 Integrase-like, catalytic core RY45_RS16905 IPR023009 Tyrosine recombinase XerC/XerD RY45_RS16905 IPR023109 Integrase/recombinase, N-terminal RY45_RS16910 IPR001226 Flavodoxin, conserved site RY45_RS16910 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS16910 IPR010086 Flavodoxin, long chain RY45_RS16910 IPR029039 Flavoprotein-like RY45_RS16915 IPR002510 TldD/PmbA RY45_RS16920 IPR002510 TldD/PmbA RY45_RS16925 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS16930 IPR005490 L,D-transpeptidase catalytic domain RY45_RS16930 IPR018392 LysM domain RY45_RS16935 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase RY45_RS16940 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RY45_RS16945 IPR007817 Pyoverdine biosynthesis RY45_RS16945 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA RY45_RS16950 IPR002641 Patatin/Phospholipase A2-related RY45_RS16950 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS16955 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS16960 IPR006656 Molybdopterin oxidoreductase RY45_RS16960 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS16960 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS16960 IPR009010 Aspartate decarboxylase-like domain RY45_RS16965 IPR005614 NrfD family RY45_RS16970 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS16970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS16975 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS16975 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS16975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS16980 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS16980 IPR001789 Signal transduction response regulator, receiver domain RY45_RS16980 IPR011006 CheY-like superfamily RY45_RS16980 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS16980 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS16985 IPR003018 GAF domain RY45_RS16985 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS16985 IPR010559 Signal transduction histidine kinase, internal region RY45_RS16985 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RY45_RS16985 IPR029016 GAF domain-like RY45_RS16990 IPR001789 Signal transduction response regulator, receiver domain RY45_RS16990 IPR007492 LytTR DNA-binding domain RY45_RS16990 IPR011006 CheY-like superfamily RY45_RS16995 IPR003706 Carbon starvation protein CstA RY45_RS16995 IPR025299 CstA C-terminal domain RY45_RS17000 IPR005320 Peptidase S51 RY45_RS17000 IPR029062 Class I glutamine amidotransferase-like RY45_RS17005 IPR000362 Fumarate lyase family RY45_RS17005 IPR005677 Fumarate hydratase, class II RY45_RS17005 IPR008948 L-Aspartase-like RY45_RS17005 IPR018951 Fumarase C, C-terminal RY45_RS17005 IPR020557 Fumarate lyase, conserved site RY45_RS17005 IPR022761 Fumarate lyase, N-terminal RY45_RS17005 IPR024083 Fumarase/histidase, N-terminal RY45_RS17010 IPR009468 Protein of unknown function DUF1090 RY45_RS17015 IPR003787 Sulphur relay, DsrE/F-like protein RY45_RS17015 IPR027396 DsrEFH-like RY45_RS17020 IPR000160 GGDEF domain RY45_RS17020 IPR009050 Globin-like RY45_RS17020 IPR012292 Globin, structural domain RY45_RS17020 IPR029787 Nucleotide cyclase RY45_RS17025 IPR005829 Sugar transporter, conserved site RY45_RS17025 IPR011701 Major facilitator superfamily RY45_RS17025 IPR020846 Major facilitator superfamily domain RY45_RS17030 IPR001247 Exoribonuclease, phosphorolytic domain 1 RY45_RS17030 IPR003029 Ribosomal protein S1, RNA-binding domain RY45_RS17030 IPR004087 K Homology domain RY45_RS17030 IPR004088 K Homology domain, type 1 RY45_RS17030 IPR012162 Polyribonucleotide nucleotidyltransferase RY45_RS17030 IPR012340 Nucleic acid-binding, OB-fold RY45_RS17030 IPR015847 Exoribonuclease, phosphorolytic domain 2 RY45_RS17030 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RY45_RS17030 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS17030 IPR022967 RNA-binding domain, S1 RY45_RS17030 IPR027408 PNPase/RNase PH domain RY45_RS17035 IPR000589 Ribosomal protein S15 RY45_RS17035 IPR005290 Ribosomal protein S15, bacterial-type RY45_RS17035 IPR009068 S15/NS1, RNA-binding RY45_RS17040 IPR002501 Pseudouridine synthase II RY45_RS17040 IPR014780 tRNA pseudouridine synthase II, TruB RY45_RS17040 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal RY45_RS17040 IPR015947 PUA-like domain RY45_RS17040 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS17040 IPR032819 RY45_RS17040 RY45_RS17045 IPR000238 Ribosome-binding factor A RY45_RS17045 IPR015946 K homology domain-like, alpha/beta RY45_RS17045 IPR020053 Ribosome-binding factor A, conserved site RY45_RS17045 IPR023799 Ribosome-binding factor A domain RY45_RS17050 IPR000178 Translation initiation factor aIF-2, bacterial-like RY45_RS17050 IPR005225 Small GTP-binding protein domain RY45_RS17050 IPR006847 Translation initiation factor IF-2, N-terminal RY45_RS17050 IPR009000 Translation protein, beta-barrel domain RY45_RS17050 IPR009061 DNA binding domain, putative RY45_RS17050 IPR013575 Initiation factor 2 associated domain, bacterial RY45_RS17050 IPR023115 Translation initiation factor IF- 2, domain 3 RY45_RS17050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17055 IPR009019 K homology domain, prokaryotic type RY45_RS17055 IPR010213 Transcription termination factor NusA RY45_RS17055 IPR010214 Transcription termination factor NusA, C-terminal duplication RY45_RS17055 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RY45_RS17055 IPR012340 Nucleic acid-binding, OB-fold RY45_RS17055 IPR013735 Transcription factor NusA, N-terminal RY45_RS17055 IPR015946 K homology domain-like, alpha/beta RY45_RS17055 IPR022967 RNA-binding domain, S1 RY45_RS17055 IPR025249 KH domain, NusA-like RY45_RS17055 IPR030842 RY45_RS17055 RY45_RS17060 IPR003728 Ribosome maturation factor RimP RY45_RS17060 IPR028989 Ribosome maturation factor RimP, N-terminal RY45_RS17060 IPR028998 Ribosome maturation factor RimP, C-terminal RY45_RS17075 IPR004692 Preprotein translocase SecG subunit RY45_RS17080 IPR000652 Triosephosphate isomerase RY45_RS17080 IPR013785 Aldolase-type TIM barrel RY45_RS17080 IPR020861 Triosephosphate isomerase, active site RY45_RS17080 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RY45_RS17085 IPR005841 Alpha-D-phosphohexomutase superfamily RY45_RS17085 IPR005843 Alpha-D-phosphohexomutase, C-terminal RY45_RS17085 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RY45_RS17085 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RY45_RS17085 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RY45_RS17085 IPR006352 Phosphoglucosamine mutase RY45_RS17085 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RY45_RS17085 IPR016066 Alpha-D-phosphohexomutase, conserved site RY45_RS17090 IPR000489 Pterin-binding RY45_RS17090 IPR006390 Dihydropteroate synthase RY45_RS17090 IPR011005 Dihydropteroate synthase-like RY45_RS17095 IPR000642 Peptidase M41 RY45_RS17095 IPR003593 AAA+ ATPase domain RY45_RS17095 IPR003959 ATPase, AAA-type, core RY45_RS17095 IPR003960 ATPase, AAA-type, conserved site RY45_RS17095 IPR005936 Peptidase, FtsH RY45_RS17095 IPR011546 Peptidase M41, FtsH extracellular RY45_RS17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17100 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RY45_RS17100 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria RY45_RS17100 IPR015507 Ribosomal RNA large subunit methyltransferase E RY45_RS17100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS17105 IPR001890 RNA-binding, CRM domain RY45_RS17105 IPR017924 RNA-binding protein YhbY RY45_RS17115 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RY45_RS17115 IPR006359 Transcription elongation factor GreA RY45_RS17115 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RY45_RS17115 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RY45_RS17115 IPR023459 Transcription elongation factor GreA/GreB family RY45_RS17115 IPR028624 Transcription elongation factor GreA/GreB RY45_RS17120 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS17120 IPR025713 Motility protein B, N-terminal domain RY45_RS17125 IPR000540 Flagellar motor protein MotA, conserved site RY45_RS17125 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS17125 IPR022522 Flagellar motor stator, MotA RY45_RS17130 IPR003761 Exonuclease VII, small subunit RY45_RS17135 IPR000092 Polyprenyl synthetase RY45_RS17135 IPR008949 Terpenoid synthase RY45_RS17135 IPR017446 Polyprenyl synthetase-related RY45_RS17140 IPR005475 Transketolase-like, pyrimidine-binding domain RY45_RS17140 IPR005477 Deoxyxylulose-5-phosphate synthase RY45_RS17140 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS17140 IPR020826 Transketolase binding site RY45_RS17140 IPR029061 Thiamin diphosphate-binding fold RY45_RS17140 IPR033247 RY45_RS17140 RY45_RS17140 IPR033248 RY45_RS17140 RY45_RS17145 IPR000515 MetI-like domain RY45_RS17145 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RY45_RS17150 IPR000515 MetI-like domain RY45_RS17155 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS17155 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site RY45_RS17155 IPR030678 RY45_RS17155 RY45_RS17160 IPR003439 ABC transporter-like RY45_RS17160 IPR003593 AAA+ ATPase domain RY45_RS17160 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS17160 IPR017871 ABC transporter, conserved site RY45_RS17160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17165 IPR007686 YutG/PgpA domain RY45_RS17165 IPR026037 Phosphatidylglycerophosphatase A RY45_RS17165 IPR027416 YutG-like domain RY45_RS17170 IPR006283 Thiamine-monophosphate kinase RY45_RS17170 IPR010918 AIR synthase-related protein, C-terminal domain RY45_RS17170 IPR016188 PurM, N-terminal-like RY45_RS17175 IPR006027 NusB/RsmB/TIM44 RY45_RS17175 IPR011605 NusB antitermination factor RY45_RS17180 IPR002180 6,7-dimethyl-8-ribityllumazine synthase RY45_RS17185 IPR001254 Peptidase S1 RY45_RS17185 IPR001314 Peptidase S1A, chymotrypsin-type RY45_RS17185 IPR009003 Trypsin-like cysteine/serine peptidase domain RY45_RS17185 IPR017756 Transmembrane Gly-Cys-Arg, conserved site RY45_RS17185 IPR018114 Peptidase S1, trypsin family, active site RY45_RS17185 IPR020008 GlyGly-CTERM domain RY45_RS17185 IPR033116 RY45_RS17185 RY45_RS17190 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RY45_RS17190 IPR017945 DHBP synthase RibB-like alpha/beta domain RY45_RS17190 IPR032677 RY45_RS17190 RY45_RS17195 IPR001783 Lumazine-binding protein RY45_RS17195 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS17195 IPR023366 ATP synthase subunit alpha-like domain RY45_RS17195 IPR026017 Lumazine-binding domain RY45_RS17200 IPR002125 CMP/dCMP deaminase, zinc-binding RY45_RS17200 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RY45_RS17200 IPR004794 Riboflavin biosynthesis protein RibD RY45_RS17200 IPR016192 APOBEC/CMP deaminase, zinc-binding RY45_RS17200 IPR016193 Cytidine deaminase-like RY45_RS17200 IPR024072 Dihydrofolate reductase-like domain RY45_RS17205 IPR003796 Ribonucleotide reductase regulator NrdR-like RY45_RS17205 IPR005144 ATP-cone RY45_RS17215 IPR001085 Serine hydroxymethyltransferase RY45_RS17215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS17215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS17215 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS17215 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RY45_RS17225 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RY45_RS17225 IPR011057 Mss4-like RY45_RS17230 IPR020945 DMSO/Nitrate reductase chaperone RY45_RS17230 IPR023069 Chaperone TorD RY45_RS17250 IPR000014 PAS domain RY45_RS17250 IPR000160 GGDEF domain RY45_RS17250 IPR001610 PAC motif RY45_RS17250 IPR001633 EAL domain RY45_RS17250 IPR013656 PAS fold-4 RY45_RS17250 IPR029787 Nucleotide cyclase RY45_RS17260 IPR000873 AMP-dependent synthetase/ligase RY45_RS17260 IPR011904 Acetate-CoA ligase RY45_RS17260 IPR020845 AMP-binding, conserved site RY45_RS17260 IPR025110 AMP-binding enzyme C-terminal domain RY45_RS17260 IPR032387 RY45_RS17260 RY45_RS17265 IPR001874 Dehydroquinase, class II RY45_RS17265 IPR018509 Dehydroquinase, class II, conserved site RY45_RS17270 IPR000089 Biotin/lipoyl attachment RY45_RS17270 IPR001249 Acetyl-CoA biotin carboxyl carrier RY45_RS17270 IPR001882 Biotin-binding site RY45_RS17270 IPR011053 Single hybrid motif RY45_RS17275 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RY45_RS17275 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RY45_RS17275 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RY45_RS17275 IPR005482 Biotin carboxylase, C-terminal RY45_RS17275 IPR011054 Rudiment single hybrid motif RY45_RS17275 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS17275 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS17275 IPR016185 Pre-ATP-grasp domain RY45_RS17280 IPR010398 Protein of unknown function DUF997 RY45_RS17285 IPR001734 Sodium/solute symporter RY45_RS17285 IPR011849 Sodium/pantothenate symporter RY45_RS17290 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS17290 IPR003352 Phosphotransferase system, EIIC RY45_RS17290 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS17295 IPR000847 Transcription regulator HTH, LysR RY45_RS17295 IPR005119 LysR, substrate-binding RY45_RS17295 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS17300 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS17300 IPR011032 GroES (chaperonin 10)-like RY45_RS17300 IPR013154 Alcohol dehydrogenase GroES-like RY45_RS17300 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 RY45_RS17300 IPR016040 NAD(P)-binding domain RY45_RS17300 IPR020843 Polyketide synthase, enoylreductase RY45_RS17305 IPR004498 Ribosomal protein L11 methyltransferase RY45_RS17305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS17310 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY45_RS17310 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS17310 IPR016040 NAD(P)-binding domain RY45_RS17315 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS17315 IPR011004 Trimeric LpxA-like RY45_RS17315 IPR018357 Hexapeptide transferase, conserved site RY45_RS17315 IPR024688 Maltose/galactoside acetyltransferase RY45_RS17320 IPR000415 Nitroreductase-like RY45_RS17320 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RY45_RS17320 IPR029479 Nitroreductase RY45_RS17325 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RY45_RS17325 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RY45_RS17325 IPR013785 Aldolase-type TIM barrel RY45_RS17325 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS17330 IPR002142 Peptidase S49 RY45_RS17330 IPR004634 Peptidase S49, protease IV RY45_RS17330 IPR029045 ClpP/crotonase-like domain RY45_RS17335 IPR000086 NUDIX hydrolase domain RY45_RS17335 IPR015797 NUDIX hydrolase domain-like RY45_RS17335 IPR020084 NUDIX hydrolase, conserved site RY45_RS17340 IPR021372 Protein of unknown function DUF2989 RY45_RS17345 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RY45_RS17345 IPR016040 NAD(P)-binding domain RY45_RS17345 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RY45_RS17345 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RY45_RS17345 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RY45_RS17345 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RY45_RS17350 IPR009749 Protein of unknown function DUF1315 RY45_RS17355 IPR006033 L-asparaginase, type I RY45_RS17355 IPR006034 Asparaginase/glutaminase RY45_RS17355 IPR020827 Asparaginase/glutaminase, active site 1 RY45_RS17355 IPR027473 L-asparaginase, C-terminal domain RY45_RS17355 IPR027474 L-asparaginase, N-terminal RY45_RS17355 IPR027475 Asparaginase/glutaminase, active site 2 RY45_RS17360 IPR004445 Sodium/glutamate symporter RY45_RS17365 IPR003660 HAMP linker domain RY45_RS17365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS17365 IPR029151 Periplasmic sensor domain-like RY45_RS17365 IPR033479 RY45_RS17365 RY45_RS17370 IPR000352 Peptide chain release factor class I/class II RY45_RS17370 IPR004374 Peptide chain release factor 2 RY45_RS17370 IPR005139 Peptide chain release factor RY45_RS17370 IPR014720 Double-stranded RNA-binding domain RY45_RS17375 IPR002313 Lysine-tRNA ligase, class II RY45_RS17375 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RY45_RS17375 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RY45_RS17375 IPR012340 Nucleic acid-binding, OB-fold RY45_RS17375 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RY45_RS17375 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RY45_RS17380 IPR003719 Phenazine biosynthesis PhzF protein RY45_RS17385 IPR001094 Flavodoxin RY45_RS17385 IPR001433 Oxidoreductase FAD/NAD(P)-binding RY45_RS17385 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RY45_RS17385 IPR003097 FAD-binding, type 1 RY45_RS17385 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS17385 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain RY45_RS17385 IPR017938 Riboflavin synthase-like beta-barrel RY45_RS17385 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 RY45_RS17385 IPR029039 Flavoprotein-like RY45_RS17390 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RY45_RS17390 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RY45_RS17390 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RY45_RS17390 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit RY45_RS17395 IPR002500 Phosphoadenosine phosphosulphate reductase RY45_RS17395 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RY45_RS17395 IPR011800 Phosphoadenosine phosphosulphate reductase CysH RY45_RS17395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS17400 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RY45_RS17405 IPR000515 MetI-like domain RY45_RS17410 IPR000644 CBS domain RY45_RS17410 IPR003439 ABC transporter-like RY45_RS17410 IPR003593 AAA+ ATPase domain RY45_RS17410 IPR005892 Glycine betaine transport ATP-binding subunit RY45_RS17410 IPR017871 ABC transporter, conserved site RY45_RS17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17415 IPR001796 Dihydrofolate reductase domain RY45_RS17415 IPR012259 Dihydrofolate reductase RY45_RS17415 IPR017925 Dihydrofolate reductase conserved site RY45_RS17415 IPR024072 Dihydrofolate reductase-like domain RY45_RS17420 IPR024528 Domain of unknown function DUF3815 RY45_RS17425 IPR010619 Domain of unknown function DUF1212 RY45_RS17430 IPR021482 Protein of unknown function DUF3135 RY45_RS17435 IPR001453 Molybdopterin binding domain RY45_RS17435 IPR008284 Molybdenum cofactor biosynthesis, conserved site RY45_RS17440 IPR020240 Uncharacterised protein family UPF0412, YaaI RY45_RS17445 IPR014030 Beta-ketoacyl synthase, N-terminal RY45_RS17445 IPR014031 Beta-ketoacyl synthase, C-terminal RY45_RS17445 IPR016039 Thiolase-like RY45_RS17445 IPR018201 Beta-ketoacyl synthase, active site RY45_RS17445 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RY45_RS17450 IPR002347 Glucose/ribitol dehydrogenase RY45_RS17450 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative RY45_RS17450 IPR016040 NAD(P)-binding domain RY45_RS17455 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted RY45_RS17455 IPR029069 HotDog domain RY45_RS17460 IPR014030 Beta-ketoacyl synthase, N-terminal RY45_RS17460 IPR014031 Beta-ketoacyl synthase, C-terminal RY45_RS17460 IPR016039 Thiolase-like RY45_RS17460 IPR018201 Beta-ketoacyl synthase, active site RY45_RS17460 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RY45_RS17465 IPR021675 Protein of unknown function DUF3261 RY45_RS17475 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RY45_RS17475 IPR029046 Lipoprotein localisation LolA/LolB/LppX RY45_RS17480 IPR006683 Thioesterase superfamily RY45_RS17480 IPR029069 HotDog domain RY45_RS17485 IPR001106 Aromatic amino acid lyase RY45_RS17485 IPR008948 L-Aspartase-like RY45_RS17485 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RY45_RS17485 IPR024083 Fumarase/histidase, N-terminal RY45_RS17490 IPR001173 Glycosyltransferase 2-like RY45_RS17490 IPR004960 Bacterial lipid A biosynthesis acyltransferase RY45_RS17490 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS17495 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RY45_RS17495 IPR016962 Dehydrase, ECs4332, predicted RY45_RS17495 IPR029069 HotDog domain RY45_RS17500 IPR000873 AMP-dependent synthetase/ligase RY45_RS17510 IPR003231 Acyl carrier protein (ACP) RY45_RS17510 IPR009081 Acyl carrier protein-like RY45_RS17515 IPR009081 Acyl carrier protein-like RY45_RS17520 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS17525 IPR014030 Beta-ketoacyl synthase, N-terminal RY45_RS17525 IPR016039 Thiolase-like RY45_RS17535 IPR001077 O-methyltransferase, family 2 RY45_RS17535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS17545 IPR001604 DNA/RNA non-specific endonuclease RY45_RS17545 IPR018524 DNA/RNA non-specific endonuclease, active site RY45_RS17545 IPR020821 Extracellular Endonuclease, subunit A RY45_RS17550 IPR004852 Di-haem cytochrome c peroxidase RY45_RS17550 IPR009056 Cytochrome c-like domain RY45_RS17550 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase RY45_RS17555 IPR001148 Alpha carbonic anhydrase RY45_RS17555 IPR018338 Carbonic anhydrase, alpha-class, conserved site RY45_RS17555 IPR023561 Carbonic anhydrase, alpha-class RY45_RS17560 IPR007342 Pseudouridine-5'-phosphate glycosidase RY45_RS17565 IPR000485 AsnC-type HTH domain RY45_RS17565 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RY45_RS17565 IPR011611 Carbohydrate kinase PfkB RY45_RS17565 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS17565 IPR029056 Ribokinase-like RY45_RS17570 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD RY45_RS17570 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RY45_RS17575 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RY45_RS17575 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RY45_RS17575 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RY45_RS17575 IPR007419 BFD-like [2Fe-2S]-binding domain RY45_RS17575 IPR017121 Nitrite reductase [NAD(P)H], large subunit RY45_RS17575 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS17580 IPR003439 ABC transporter-like RY45_RS17580 IPR003593 AAA+ ATPase domain RY45_RS17580 IPR005890 Nitrate transport ATP-binding subunit C/D RY45_RS17580 IPR017871 ABC transporter, conserved site RY45_RS17580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17585 IPR000515 MetI-like domain RY45_RS17595 IPR005561 ANTAR domain RY45_RS17595 IPR011006 CheY-like superfamily RY45_RS17595 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS17600 IPR000878 Tetrapyrrole methylase RY45_RS17600 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RY45_RS17600 IPR006366 Uroporphyrin-III C-methyltransferase RY45_RS17600 IPR014776 Tetrapyrrole methylase, subdomain 2 RY45_RS17600 IPR014777 Tetrapyrrole methylase, subdomain 1 RY45_RS17605 IPR006656 Molybdopterin oxidoreductase RY45_RS17605 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS17605 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RY45_RS17605 IPR007419 BFD-like [2Fe-2S]-binding domain RY45_RS17605 IPR009010 Aspartate decarboxylase-like domain RY45_RS17605 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RY45_RS17610 IPR001537 tRNA/rRNA methyltransferase, SpoU type RY45_RS17610 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RY45_RS17610 IPR029028 Alpha/beta knot methyltransferases RY45_RS17620 IPR006015 Universal stress protein A RY45_RS17620 IPR006016 UspA RY45_RS17620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS17625 IPR032676 RY45_RS17625 RY45_RS17630 IPR000965 Gamma-glutamyl phosphate reductase GPR RY45_RS17630 IPR012134 Glutamate-5-semialdehyde dehydrogenase RY45_RS17630 IPR015590 Aldehyde dehydrogenase domain RY45_RS17630 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS17630 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS17630 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS17630 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RY45_RS17635 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS17635 IPR001057 Glutamate/acetylglutamate kinase RY45_RS17635 IPR002478 PUA domain RY45_RS17635 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RY45_RS17635 IPR011529 Glutamate 5-kinase RY45_RS17635 IPR015947 PUA-like domain RY45_RS17635 IPR019797 Glutamate 5-kinase, conserved site RY45_RS17640 IPR009986 Sigma factor-binding protein Crl RY45_RS17645 IPR010520 Protein of unknown function DUF1100, hydrolase-like RY45_RS17645 IPR029058 Alpha/Beta hydrolase fold RY45_RS17650 IPR000836 Phosphoribosyltransferase domain RY45_RS17650 IPR023747 Xanthine-guanine phosphoribosyltransferase RY45_RS17650 IPR029057 Phosphoribosyltransferase-like RY45_RS17655 IPR001160 Peptidase M20C, Xaa-His dipeptidase RY45_RS17655 IPR002933 Peptidase M20 RY45_RS17655 IPR011650 Peptidase M20, dimerisation domain RY45_RS17660 IPR003439 ABC transporter-like RY45_RS17660 IPR003593 AAA+ ATPase domain RY45_RS17660 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS17660 IPR017871 ABC transporter, conserved site RY45_RS17660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17665 IPR003439 ABC transporter-like RY45_RS17665 IPR003593 AAA+ ATPase domain RY45_RS17665 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RY45_RS17665 IPR017871 ABC transporter, conserved site RY45_RS17665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17670 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS17670 IPR030678 RY45_RS17670 RY45_RS17675 IPR000515 MetI-like domain RY45_RS17680 IPR000515 MetI-like domain RY45_RS17685 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS17685 IPR012910 TonB-dependent receptor, plug RY45_RS17690 IPR016866 Uncharacterised conserved protein UCP028069 RY45_RS17695 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS17695 IPR017270 Outer membrane stability protein, TolR RY45_RS17700 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS17705 IPR003400 Biopolymer transport protein ExbD/TolR RY45_RS17710 IPR006260 TonB, C-terminal RY45_RS17715 IPR011990 Tetratricopeptide-like helical domain RY45_RS17715 IPR019734 Tetratricopeptide repeat RY45_RS17720 IPR001223 Glycoside hydrolase, family 18, catalytic domain RY45_RS17720 IPR001579 Glycoside hydrolase, chitinase active site RY45_RS17720 IPR003610 Carbohydrate-binding module family 5/12 RY45_RS17720 IPR009470 Chitinase, C-terminal RY45_RS17720 IPR011583 Chitinase II RY45_RS17720 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS17720 IPR017853 Glycoside hydrolase, superfamily RY45_RS17720 IPR029070 Chitinase insertion domain RY45_RS17725 IPR005135 Endonuclease/exonuclease/phosphatase RY45_RS17725 IPR020008 GlyGly-CTERM domain RY45_RS17730 IPR024445 Transposase, ISXO2-like RY45_RS17765 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RY45_RS17765 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS17765 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RY45_RS17765 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RY45_RS17765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS17765 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RY45_RS17765 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RY45_RS17765 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RY45_RS17770 IPR003660 HAMP linker domain RY45_RS17770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS17770 IPR004090 Chemotaxis methyl-accepting receptor RY45_RS17775 IPR007340 Opacity-associated protein A RY45_RS17780 IPR002059 Cold-shock protein, DNA-binding RY45_RS17780 IPR011129 Cold shock protein RY45_RS17780 IPR012156 Cold shock, CspA RY45_RS17780 IPR012340 Nucleic acid-binding, OB-fold RY45_RS17780 IPR019844 Cold-shock conserved site RY45_RS17810 IPR012337 Ribonuclease H-like domain RY45_RS17810 IPR013520 Exonuclease, RNase T/DNA polymerase III RY45_RS17810 IPR022894 Oligoribonuclease RY45_RS17815 IPR004881 Ribosome biogenesis GTPase RsgA, putative RY45_RS17815 IPR010914 EngC GTPase RY45_RS17815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17820 IPR003817 Phosphatidylserine decarboxylase-related RY45_RS17820 IPR033177 RY45_RS17820 RY45_RS17820 IPR033178 RY45_RS17820 RY45_RS17825 IPR003034 SAP domain RY45_RS17825 IPR018668 Protein of unknown function DUF2132 RY45_RS17830 IPR021343 Protein of unknown function DUF2960 RY45_RS17840 IPR007339 Protein of unknown function DUF417 RY45_RS17845 IPR003779 Carboxymuconolactone decarboxylase-like RY45_RS17845 IPR004675 Alkylhydroperoxidase AhpD core RY45_RS17845 IPR029032 AhpD-like RY45_RS17850 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS17850 IPR009057 Homeodomain-like RY45_RS17850 IPR011051 RmlC-like cupin domain RY45_RS17850 IPR018060 DNA binding HTH domain, AraC-type RY45_RS17850 IPR018062 HTH domain AraC-type, conserved site RY45_RS17850 IPR020449 Transcription regulator HTH, AraC- type RY45_RS17850 IPR032783 RY45_RS17850 RY45_RS17860 IPR000014 PAS domain RY45_RS17860 IPR000160 GGDEF domain RY45_RS17860 IPR001633 EAL domain RY45_RS17860 IPR013656 PAS fold-4 RY45_RS17860 IPR029787 Nucleotide cyclase RY45_RS17865 IPR009671 Regulator of ribonuclease activity B domain RY45_RS17865 IPR016716 Regulator of ribonuclease activity B RY45_RS17870 IPR008757 Peptidase M6-like, domain RY45_RS17870 IPR012300 Peptidase M6, InhA RY45_RS17870 IPR024079 Metallopeptidase, catalytic domain RY45_RS17885 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS17885 IPR002410 Peptidase S33 RY45_RS17885 IPR029058 Alpha/Beta hydrolase fold RY45_RS17890 IPR003439 ABC transporter-like RY45_RS17890 IPR003593 AAA+ ATPase domain RY45_RS17890 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS17890 IPR017871 ABC transporter, conserved site RY45_RS17890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17895 IPR010305 Protein of unknown function DUF903 RY45_RS17895 IPR010920 Like-Sm (LSM) domain RY45_RS17900 IPR000209 Peptidase S8/S53 domain RY45_RS17900 IPR009020 Proteinase inhibitor, propeptide RY45_RS17900 IPR010259 Proteinase inhibitor I9 RY45_RS17900 IPR015500 Peptidase S8, subtilisin-related RY45_RS17900 IPR022398 Peptidase S8, subtilisin, His-active site RY45_RS17900 IPR023828 Peptidase S8, subtilisin, Ser-active site RY45_RS17905 IPR001307 Thiosulphate sulfurtransferase, conserved site RY45_RS17905 IPR001763 Rhodanese-like domain RY45_RS17910 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS17910 IPR015868 Glutaminase RY45_RS17915 IPR007416 Protein of unknown function DUF469 RY45_RS17920 IPR003358 tRNA (guanine-N-7) methyltransferase RY45_RS17920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS17925 IPR007484 Peptidase M28 RY45_RS17930 IPR004839 Aminotransferase, class I/classII RY45_RS17930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS17930 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS17930 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS17935 IPR001633 EAL domain RY45_RS17935 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RY45_RS17940 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS17940 IPR010099 Sugar nucleotide epimerase YfcH,-like putative RY45_RS17940 IPR013549 Domain of unknown function DUF1731 RY45_RS17940 IPR016040 NAD(P)-binding domain RY45_RS17945 IPR003838 Permease FtsX-like RY45_RS17950 IPR003439 ABC transporter-like RY45_RS17950 IPR003593 AAA+ ATPase domain RY45_RS17950 IPR017871 ABC transporter, conserved site RY45_RS17950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS17955 IPR008265 Lipase, GDSL, active site RY45_RS17955 IPR013830 RY45_RS17955 RY45_RS17960 IPR001789 Signal transduction response regulator, receiver domain RY45_RS17960 IPR002545 CheW-like protein RY45_RS17960 IPR011006 CheY-like superfamily RY45_RS17960 IPR024181 Chemotaxis response regulator CheV RY45_RS17970 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS17970 IPR006512 YidE/YbjL duplication RY45_RS17970 IPR023018 Transport protein YidE, putative RY45_RS17975 IPR004254 Hly-III-related RY45_RS17975 IPR005744 HylII RY45_RS17980 IPR002129 Pyridoxal phosphate-dependent decarboxylase RY45_RS17980 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS17980 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS17980 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS17985 IPR006008 Intracellular septation protein A RY45_RS17990 IPR005545 YCII-related RY45_RS17990 IPR011008 Dimeric alpha-beta barrel RY45_RS17995 IPR000760 Inositol monophosphatase RY45_RS17995 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial RY45_RS17995 IPR020583 Inositol monophosphatase, metal-binding site RY45_RS18000 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RY45_RS18000 IPR010994 RuvA domain 2-like RY45_RS18005 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RY45_RS18005 IPR005835 Nucleotidyl transferase RY45_RS18005 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS18010 IPR000109 Proton-dependent oligopeptide transporter family RY45_RS18010 IPR005279 Amino acid/peptide transporter family RY45_RS18010 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RY45_RS18010 IPR020846 Major facilitator superfamily domain RY45_RS18015 IPR001789 Signal transduction response regulator, receiver domain RY45_RS18015 IPR011006 CheY-like superfamily RY45_RS18025 IPR002611 IstB-like ATP-binding protein RY45_RS18025 IPR003593 AAA+ ATPase domain RY45_RS18025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18030 IPR016040 NAD(P)-binding domain RY45_RS18045 IPR032317 RY45_RS18045 RY45_RS18050 IPR003423 Outer membrane efflux protein RY45_RS18055 IPR001269 tRNA-dihydrouridine synthase RY45_RS18055 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RY45_RS18055 IPR013785 Aldolase-type TIM barrel RY45_RS18055 IPR018517 tRNA-dihydrouridine synthase, conserved site RY45_RS18055 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RY45_RS18055 IPR032887 RY45_RS18055 RY45_RS18060 IPR002197 DNA binding HTH domain, Fis-type RY45_RS18060 IPR005412 DNA-binding protein Fis RY45_RS18060 IPR009057 Homeodomain-like RY45_RS18065 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS18090 IPR000361 FeS cluster biogenesis RY45_RS18090 IPR016092 FeS cluster insertion protein RY45_RS18090 IPR017870 FeS cluster insertion, C-terminal, conserved site RY45_RS18090 IPR023063 Iron-sulfur cluster insertion protein ErpA RY45_RS18100 IPR001807 Chloride channel, voltage gated RY45_RS18100 IPR014743 Chloride channel, core RY45_RS18105 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RY45_RS18105 IPR005814 Aminotransferase class-III RY45_RS18105 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS18105 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS18105 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS18115 IPR002781 Transmembrane protein TauE like RY45_RS18120 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RY45_RS18125 IPR022584 Protein of unknown function DUF2937 RY45_RS18130 IPR001789 Signal transduction response regulator, receiver domain RY45_RS18130 IPR003607 HD/PDEase domain RY45_RS18130 IPR006674 HD domain RY45_RS18130 IPR011006 CheY-like superfamily RY45_RS18130 IPR021800 Domain of unknown function DUF3369 RY45_RS18135 IPR000847 Transcription regulator HTH, LysR RY45_RS18135 IPR005119 LysR, substrate-binding RY45_RS18135 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18140 IPR000390 Small multidrug resistance protein family RY45_RS18140 IPR023740 Spermidine export protein MdtJ RY45_RS18145 IPR000390 Small multidrug resistance protein family RY45_RS18145 IPR023737 Spermidine export protein MdtI RY45_RS18150 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS18150 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS18155 IPR001264 Glycosyl transferase, family 51 RY45_RS18155 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS18155 IPR011813 Penicillin-binding protein 1B RY45_RS18155 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS18155 IPR023346 Lysozyme-like domain RY45_RS18155 IPR028166 Bifunctional transglycosylase second domain RY45_RS18160 IPR001650 Helicase, C-terminal RY45_RS18160 IPR007502 Helicase-associated domain RY45_RS18160 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RY45_RS18160 IPR011545 DEAD/DEAH box helicase domain RY45_RS18160 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal RY45_RS18160 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS18160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18165 IPR004175 2',5' RNA ligase RY45_RS18165 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RY45_RS18170 IPR005224 Sugar fermentation stimulation protein RY45_RS18175 IPR000962 Zinc finger, DksA/TraR C4-type RY45_RS18175 IPR012784 RNA polymerase-binding transcription factor DksA RY45_RS18175 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RY45_RS18180 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RY45_RS18180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS18180 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RY45_RS18180 IPR022380 Glutamyl-Q tRNA(Asp) synthetase RY45_RS18185 IPR002646 Poly A polymerase, head domain RY45_RS18185 IPR010206 Poly(A) polymerase I RY45_RS18185 IPR025866 Polymerase A arginine-rich C-terminal domain RY45_RS18185 IPR032828 RY45_RS18185 RY45_RS18190 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RY45_RS18195 IPR003700 Ketopantoate hydroxymethyltransferase RY45_RS18195 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RY45_RS18200 IPR003721 Pantoate-beta-alanine ligase RY45_RS18200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS18205 IPR001763 Rhodanese-like domain RY45_RS18215 IPR005416 Type III secretion chaperone SycE RY45_RS18215 IPR010261 Tir chaperone protein (CesT) family RY45_RS18225 IPR021778 Protein of unknown function DUF3343 RY45_RS18230 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RY45_RS18230 IPR008275 CoA enzyme activase RY45_RS18235 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component RY45_RS18240 IPR000412 ABC-2 transporter RY45_RS18240 IPR013525 ABC-2 type transporter RY45_RS18245 IPR003439 ABC transporter-like RY45_RS18245 IPR003593 AAA+ ATPase domain RY45_RS18245 IPR017871 ABC transporter, conserved site RY45_RS18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18250 IPR000836 Phosphoribosyltransferase domain RY45_RS18250 IPR005904 Hypoxanthine phosphoribosyl transferase RY45_RS18250 IPR029057 Phosphoribosyltransferase-like RY45_RS18255 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS18255 IPR009057 Homeodomain-like RY45_RS18255 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS18255 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS18260 IPR003382 Flavoprotein RY45_RS18260 IPR004507 Decarboxylase UbiX/Pad1 RY45_RS18265 IPR000713 Mur ligase, N-terminal RY45_RS18265 IPR004101 Mur ligase, C-terminal RY45_RS18265 IPR005757 Murein peptide ligase RY45_RS18265 IPR013221 Mur ligase, central RY45_RS18265 IPR016040 NAD(P)-binding domain RY45_RS18270 IPR008162 Inorganic pyrophosphatase RY45_RS18285 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RY45_RS18285 IPR012336 Thioredoxin-like fold RY45_RS18295 IPR021253 Protein of unknown function DUF2796 RY45_RS18300 IPR003439 ABC transporter-like RY45_RS18300 IPR003593 AAA+ ATPase domain RY45_RS18300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18305 IPR003838 Permease FtsX-like RY45_RS18305 IPR025857 MacB-like periplasmic core domain RY45_RS18310 IPR021727 Protein of unknown function DUF3299 RY45_RS18315 IPR021254 Protein of unknown function DUF2806 RY45_RS18320 IPR000014 PAS domain RY45_RS18320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS18320 IPR013655 PAS fold-3 RY45_RS18330 IPR002891 Adenylylsulphate kinase RY45_RS18330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18335 IPR004680 Citrate transporter-like domain RY45_RS18335 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS18340 IPR000795 Elongation factor, GTP-binding domain RY45_RS18340 IPR005225 Small GTP-binding protein domain RY45_RS18340 IPR009000 Translation protein, beta-barrel domain RY45_RS18340 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RY45_RS18340 IPR011779 Sulphate adenylyltransferase, large subunit RY45_RS18340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18340 IPR031157 RY45_RS18340 RY45_RS18345 IPR002500 Phosphoadenosine phosphosulphate reductase RY45_RS18345 IPR011784 Sulphate adenylyltransferase, small subunit RY45_RS18345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS18350 IPR000878 Tetrapyrrole methylase RY45_RS18350 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RY45_RS18350 IPR006366 Uroporphyrin-III C-methyltransferase RY45_RS18350 IPR006367 Sirohaem synthase, N-terminal RY45_RS18350 IPR012409 Sirohaem synthase RY45_RS18350 IPR014776 Tetrapyrrole methylase, subdomain 2 RY45_RS18350 IPR014777 Tetrapyrrole methylase, subdomain 1 RY45_RS18350 IPR016040 NAD(P)-binding domain RY45_RS18350 IPR019478 Sirohaem synthase, dimerisation domain RY45_RS18350 IPR028281 Siroheme synthase, central domain RY45_RS18355 IPR001107 Band 7 protein RY45_RS18355 IPR001972 Stomatin family RY45_RS18360 IPR002810 NfeD-like, C-terminal domain RY45_RS18360 IPR012340 Nucleic acid-binding, OB-fold RY45_RS18365 IPR000644 CBS domain RY45_RS18370 IPR003439 ABC transporter-like RY45_RS18370 IPR003593 AAA+ ATPase domain RY45_RS18370 IPR017871 ABC transporter, conserved site RY45_RS18370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18370 IPR032524 RY45_RS18370 RY45_RS18370 IPR032781 RY45_RS18370 RY45_RS18375 IPR012659 Conserved hypothetical protein CHP02444 RY45_RS18380 IPR007473 Ribosomal RNA large subunit methyltransferase J RY45_RS18380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS18390 IPR025359 Protein of unknown function DUF4263 RY45_RS18395 IPR018638 Domain of unknown function DUF2061, membrane RY45_RS18400 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS18400 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS18405 IPR000551 MerR-type HTH domain RY45_RS18405 IPR009061 DNA binding domain, putative RY45_RS18410 IPR003680 Flavodoxin-like fold RY45_RS18410 IPR029039 Flavoprotein-like RY45_RS18415 IPR001734 Sodium/solute symporter RY45_RS18415 IPR011851 Sodium/proline symporter RY45_RS18415 IPR018212 Sodium/solute symporter, conserved site RY45_RS18420 IPR005490 L,D-transpeptidase catalytic domain RY45_RS18425 IPR006685 Mechanosensitive ion channel MscS RY45_RS18425 IPR010920 Like-Sm (LSM) domain RY45_RS18425 IPR030192 RY45_RS18425 RY45_RS18430 IPR000890 Aliphatic acid kinase, short-chain RY45_RS18430 IPR004372 Acetate/Proprionate kinase RY45_RS18430 IPR023865 Aliphatic acid kinase, short-chain, conserved site RY45_RS18435 IPR004375 Conserved hypothetical protein CHP00022 RY45_RS18440 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS18445 IPR002355 Multicopper oxidase, copper-binding site RY45_RS18445 IPR008972 Cupredoxin RY45_RS18445 IPR011706 Multicopper oxidase, type 2 RY45_RS18445 IPR011707 Multicopper oxidase, type 3 RY45_RS18445 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RY45_RS18450 IPR001920 Asp/Glu racemase RY45_RS18450 IPR004380 Aspartate racemase RY45_RS18450 IPR015942 Asp/Glu/hydantoin racemase RY45_RS18455 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS18460 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS18465 IPR000524 Transcription regulator HTH, GntR RY45_RS18465 IPR004839 Aminotransferase, class I/classII RY45_RS18465 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS18465 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS18480 IPR017853 Glycoside hydrolase, superfamily RY45_RS18480 IPR021488 Protein of unknown function DUF3142 RY45_RS18490 IPR000175 Sodium:neurotransmitter symporter RY45_RS18495 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS18500 IPR000175 Sodium:neurotransmitter symporter RY45_RS18505 IPR005123 Oxoglutarate/iron-dependent dioxygenase RY45_RS18505 IPR026992 Non-haem dioxygenase N-terminal domain RY45_RS18505 IPR027443 Isopenicillin N synthase-like RY45_RS18510 IPR021242 Protein of unknown function DUF2799 RY45_RS18515 IPR000150 Cof protein RY45_RS18515 IPR006379 HAD-superfamily hydrolase, subfamily IIB RY45_RS18515 IPR023214 HAD-like domain RY45_RS18520 IPR011701 Major facilitator superfamily RY45_RS18520 IPR020846 Major facilitator superfamily domain RY45_RS18525 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18525 IPR013196 Helix-turn-helix, type 11 RY45_RS18530 IPR000485 AsnC-type HTH domain RY45_RS18530 IPR011008 Dimeric alpha-beta barrel RY45_RS18530 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18530 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RY45_RS18530 IPR019887 Transcription regulator AsnC-type, C-terminal RY45_RS18530 IPR019888 Transcription regulator AsnC-type RY45_RS18535 IPR005220 Viral OB-fold, YgiW RY45_RS18545 IPR000835 MarR-type HTH domain RY45_RS18545 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18550 IPR003718 OsmC/Ohr family RY45_RS18550 IPR015946 K homology domain-like, alpha/beta RY45_RS18550 IPR019953 Organic hydroperoxide resistance protein famiy RY45_RS18555 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS18555 IPR011032 GroES (chaperonin 10)-like RY45_RS18555 IPR013149 Alcohol dehydrogenase, C-terminal RY45_RS18555 IPR016040 NAD(P)-binding domain RY45_RS18555 IPR020843 Polyketide synthase, enoylreductase RY45_RS18560 IPR000086 NUDIX hydrolase domain RY45_RS18560 IPR015797 NUDIX hydrolase domain-like RY45_RS18560 IPR020084 NUDIX hydrolase, conserved site RY45_RS18560 IPR020476 NUDIX hydrolase RY45_RS18565 IPR003370 Chromate transporter RY45_RS18565 IPR014047 Chromate transporter, long chain RY45_RS18570 IPR002579 Peptide methionine sulphoxide reductase MrsB RY45_RS18570 IPR011057 Mss4-like RY45_RS18570 IPR028427 Peptide methionine sulfoxide reductase RY45_RS18575 IPR004193 Glycoside hydrolase, family 13, N-terminal RY45_RS18575 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS18575 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS18575 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS18575 IPR013783 Immunoglobulin-like fold RY45_RS18575 IPR014756 Immunoglobulin E-set RY45_RS18575 IPR015902 Glycoside hydrolase, family 13 RY45_RS18575 IPR017853 Glycoside hydrolase, superfamily RY45_RS18580 IPR004193 Glycoside hydrolase, family 13, N-terminal RY45_RS18580 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS18580 IPR006048 Alpha-amylase, C-terminal all beta RY45_RS18580 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RY45_RS18580 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS18580 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS18580 IPR013783 Immunoglobulin-like fold RY45_RS18580 IPR014756 Immunoglobulin E-set RY45_RS18580 IPR015902 Glycoside hydrolase, family 13 RY45_RS18580 IPR017853 Glycoside hydrolase, superfamily RY45_RS18585 IPR003385 Glycoside hydrolase, family 77 RY45_RS18585 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS18585 IPR017853 Glycoside hydrolase, superfamily RY45_RS18590 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RY45_RS18590 IPR016040 NAD(P)-binding domain RY45_RS18590 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RY45_RS18590 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RY45_RS18590 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RY45_RS18590 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RY45_RS18595 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RY45_RS18595 IPR011013 Galactose mutarotase-like domain RY45_RS18595 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup RY45_RS18595 IPR025532 Glucose-6-phosphate 1-epimerase RY45_RS18600 IPR003473 Quinolinate synthetase A RY45_RS18600 IPR023513 Quinolinate synthase A, type 1 RY45_RS18605 IPR003660 HAMP linker domain RY45_RS18605 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS18605 IPR033479 RY45_RS18605 RY45_RS18640 IPR011990 Tetratricopeptide-like helical domain RY45_RS18640 IPR014162 Tol-Pal system, YbgF RY45_RS18640 IPR019734 Tetratricopeptide repeat RY45_RS18640 IPR032519 RY45_RS18640 RY45_RS18645 IPR006664 Outer membrane protein, bacterial RY45_RS18645 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS18645 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS18645 IPR014169 Peptidoglycan-associated lipoprotein RY45_RS18650 IPR007195 TolB, N-terminal RY45_RS18650 IPR011659 WD40-like Beta Propeller RY45_RS18650 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RY45_RS18650 IPR015943 WD40/YVTN repeat-like-containing domain RY45_RS18655 IPR014161 Tol-Pal system, TolA RY45_RS18660 IPR003400 Biopolymer transport protein ExbD/TolR RY45_RS18660 IPR014168 Biopolymer transport, TolR RY45_RS18665 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS18665 IPR014163 Tol-Pal system, TolQ RY45_RS18670 IPR006683 Thioesterase superfamily RY45_RS18670 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RY45_RS18670 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RY45_RS18670 IPR029069 HotDog domain RY45_RS18675 IPR011846 Cyd operon protein YbgE RY45_RS18685 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RY45_RS18690 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RY45_RS18695 IPR003593 AAA+ ATPase domain RY45_RS18695 IPR004605 DNA helicase, Holliday junction RuvB type RY45_RS18695 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RY45_RS18695 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RY45_RS18695 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS18695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18700 IPR000085 Bacterial DNA recombination protein RuvA RY45_RS18700 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RY45_RS18700 IPR010994 RuvA domain 2-like RY45_RS18700 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RY45_RS18700 IPR012340 Nucleic acid-binding, OB-fold RY45_RS18700 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RY45_RS18705 IPR003660 HAMP linker domain RY45_RS18705 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS18710 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RY45_RS18710 IPR002316 Proline-tRNA ligase, class IIa RY45_RS18710 IPR004154 Anticodon-binding RY45_RS18710 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RY45_RS18710 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RY45_RS18710 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RY45_RS18715 IPR002347 Glucose/ribitol dehydrogenase RY45_RS18715 IPR016040 NAD(P)-binding domain RY45_RS18715 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS18720 IPR026387 Outer membrane protein RY45_RS18725 IPR007410 DR1885-like metal-binding protein RY45_RS18730 IPR001753 Crotonase superfamily RY45_RS18730 IPR029045 ClpP/crotonase-like domain RY45_RS18735 IPR020206 Uncharacterised protein family, VP2110 RY45_RS18740 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS18740 IPR011004 Trimeric LpxA-like RY45_RS18740 IPR018357 Hexapeptide transferase, conserved site RY45_RS18745 IPR003115 ParB/Sulfiredoxin RY45_RS18745 IPR014956 Putative ParB-like nuclease RY45_RS18745 IPR016932 Uncharacterised conserved protein UCP029669 RY45_RS18750 IPR000914 Bacterial extracellular solute-binding protein, family 5 RY45_RS18750 IPR030678 RY45_RS18750 RY45_RS18760 IPR025218 Domain of unknown function DUF4426 RY45_RS18765 IPR003746 Protein of unknown function DUF167 RY45_RS18765 IPR005228 Conserved hypothetical protein CHP00251 RY45_RS18770 IPR003425 Uncharacterised protein family Ycf19 RY45_RS18775 IPR000304 Pyrroline-5-carboxylate reductase RY45_RS18775 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RY45_RS18775 IPR016040 NAD(P)-binding domain RY45_RS18775 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RY45_RS18775 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RY45_RS18780 IPR001608 Alanine racemase, N-terminal RY45_RS18780 IPR011078 Uncharacterised protein family UPF0001 RY45_RS18780 IPR029066 PLP-binding barrel RY45_RS18785 IPR001482 Type II secretion system protein E RY45_RS18785 IPR003593 AAA+ ATPase domain RY45_RS18785 IPR006321 Pilus retraction protein PilT RY45_RS18785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18790 IPR001482 Type II secretion system protein E RY45_RS18790 IPR006321 Pilus retraction protein PilT RY45_RS18790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18795 IPR005583 Uncharacterised protein family UPF0246 RY45_RS18800 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RY45_RS18800 IPR001650 Helicase, C-terminal RY45_RS18800 IPR011545 DEAD/DEAH box helicase domain RY45_RS18800 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS18800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18800 IPR028621 ATP-dependent RNA helicase SrmB RY45_RS18805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS18805 IPR007848 Methyltransferase small domain RY45_RS18805 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase RY45_RS18805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS18810 IPR004685 Branched-chain amino acid transport system II carrier protein RY45_RS18815 IPR004685 Branched-chain amino acid transport system II carrier protein RY45_RS18825 IPR028051 Chemotaxis phosphatase CheX-like domain RY45_RS18825 IPR028976 CheC-like domain RY45_RS18835 IPR001269 tRNA-dihydrouridine synthase RY45_RS18835 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN RY45_RS18835 IPR013785 Aldolase-type TIM barrel RY45_RS18835 IPR018517 tRNA-dihydrouridine synthase, conserved site RY45_RS18845 IPR000119 Histone-like bacterial DNA-binding protein RY45_RS18845 IPR010992 Integration host factor (IHF)-like DNA-binding domain RY45_RS18845 IPR020816 Histone-like DNA-binding protein, conserved site RY45_RS18850 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RY45_RS18855 IPR009875 PilZ domain RY45_RS18855 IPR027021 Cyclic di-GMP binding protein, PA4608 type RY45_RS18860 IPR003593 AAA+ ATPase domain RY45_RS18860 IPR004504 DNA repair protein RadA RY45_RS18860 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS18860 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS18865 IPR009875 PilZ domain RY45_RS18870 IPR000073 Alpha/beta hydrolase fold-1 RY45_RS18870 IPR029058 Alpha/Beta hydrolase fold RY45_RS18875 IPR023190 Phosphoserine phosphatase, domain 2 RY45_RS18875 IPR023214 HAD-like domain RY45_RS18880 IPR019305 Uncharacterised protein family Smp RY45_RS18885 IPR000014 PAS domain RY45_RS18885 IPR000160 GGDEF domain RY45_RS18885 IPR001610 PAC motif RY45_RS18885 IPR003018 GAF domain RY45_RS18885 IPR013655 PAS fold-3 RY45_RS18885 IPR013656 PAS fold-4 RY45_RS18885 IPR013767 PAS fold RY45_RS18885 IPR029016 GAF domain-like RY45_RS18885 IPR029787 Nucleotide cyclase RY45_RS18890 IPR000845 Nucleoside phosphorylase domain RY45_RS18890 IPR004402 Purine nucleoside phosphorylase DeoD-type RY45_RS18890 IPR018016 Nucleoside phosphorylase, conserved site RY45_RS18890 IPR018017 Nucleoside phosphorylase RY45_RS18895 IPR006124 Metalloenzyme RY45_RS18895 IPR010045 Phosphopentomutase RY45_RS18895 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS18895 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS18895 IPR024052 Phosphopentomutase DeoB cap domain RY45_RS18900 IPR000053 Pyrimidine-nucleoside phosphorylase RY45_RS18900 IPR000312 Glycosyl transferase, family 3 RY45_RS18900 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal RY45_RS18900 IPR013465 Thymidine phosphorylase RY45_RS18900 IPR017459 Glycosyl transferase family 3, N-terminal domain RY45_RS18900 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site RY45_RS18900 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic RY45_RS18905 IPR002915 DeoC/FbaB/ lacD aldolase RY45_RS18905 IPR011343 Deoxyribose-phosphate aldolase RY45_RS18905 IPR013785 Aldolase-type TIM barrel RY45_RS18905 IPR023649 Deoxyribose-phosphate aldolase type II RY45_RS18910 IPR009872 Protein of unknown function DUF1427 RY45_RS18910 IPR020017 XapX domain RY45_RS18915 IPR002668 Concentrative nucleoside transporter N-terminal domain RY45_RS18915 IPR008276 Concentrative nucleoside transporter RY45_RS18915 IPR011642 Nucleoside recognition Gate RY45_RS18915 IPR011657 Concentrative nucleoside transporter C-terminal domain RY45_RS18915 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial RY45_RS18920 IPR001130 TatD family RY45_RS18920 IPR018228 Deoxyribonuclease, TatD-related, conserved site RY45_RS18920 IPR032466 RY45_RS18920 RY45_RS18925 IPR012902 Prokaryotic N-terminal methylation site RY45_RS18930 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RY45_RS18930 IPR002792 TRAM domain RY45_RS18930 IPR010280 (Uracil-5)-methyltransferase family RY45_RS18930 IPR012340 Nucleic acid-binding, OB-fold RY45_RS18930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS18930 IPR030390 RY45_RS18930 RY45_RS18930 IPR030391 RY45_RS18930 RY45_RS18935 IPR001905 Ammonium transporter RY45_RS18935 IPR018047 Ammonium transporter, conserved site RY45_RS18935 IPR024041 Ammonium transporter AmtB-like domain RY45_RS18935 IPR029020 Ammonium/urea transporter RY45_RS18940 IPR002104 Integrase, catalytic RY45_RS18940 IPR011010 DNA breaking-rejoining enzyme, catalytic core RY45_RS18940 IPR013762 Integrase-like, catalytic core RY45_RS18945 IPR026349 Conserved hypothetical protein CHP04255 RY45_RS18955 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS18955 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS18955 IPR015927 Peptidase S24/S26A/S26B/S26C RY45_RS18955 IPR019759 Peptidase S24/S26A/S26B RY45_RS18955 IPR028360 Peptidase S24/S26, beta-ribbon domain RY45_RS18970 IPR009679 Bacteriophage 186, CII RY45_RS18985 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS18985 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS19005 IPR008766 Replication gene A protein RY45_RS19020 IPR006430 Phage portal protein, PBSX family RY45_RS19020 IPR006944 Bacteriophage/Gene transfer agent portal protein RY45_RS19020 IPR030935 RY45_RS19020 RY45_RS19025 IPR004921 Terminase, large subunit RY45_RS19025 IPR010332 ATPase terminase subunit, putative RY45_RS19030 IPR009228 Capsid scaffolding protein GpO RY45_RS19035 IPR006441 Bacteriophage P2, GpN, major capsid RY45_RS19040 IPR010270 Bacteriophage P2, GpM RY45_RS19045 IPR009225 Bacteriophage head completion protein GpL RY45_RS19050 IPR009678 Bacteriophage tail completion protein R RY45_RS19055 IPR019694 Bacteriophage HP1, Orf23 RY45_RS19060 IPR019708 Bacteriophage HP1, Orf24 RY45_RS19065 IPR000962 Zinc finger, DksA/TraR C4-type RY45_RS19065 IPR012783 Zinc finger, C4 DksA/TraR-type RY45_RS19065 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RY45_RS19070 IPR006481 Bacteriophage lambda, GpS, holin RY45_RS19075 IPR000064 Endopeptidase, NLPC/P60 domain RY45_RS19075 IPR007921 CHAP domain RY45_RS19075 IPR013423 Conserved hypothetical protein CHP02594 RY45_RS19090 IPR024406 Protein of unknown function DUF2765 RY45_RS19095 IPR010090 Phage tail tape measure protein RY45_RS19100 IPR019697 Bacteriophage HP1, Orf28 RY45_RS19105 IPR006949 Baseplate assembly protein J-like, predicted RY45_RS19110 IPR006521 Tail protein I RY45_RS19115 IPR022225 Phage tail fibre protein RY45_RS19120 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RY45_RS19135 IPR006531 Gp5 N-terminal RY45_RS19145 IPR003812 Fido domain RY45_RS19155 IPR010432 RDD RY45_RS19160 IPR005495 Permease YjgP/YjgQ, predicted RY45_RS19160 IPR030923 RY45_RS19160 RY45_RS19165 IPR005495 Permease YjgP/YjgQ, predicted RY45_RS19165 IPR030922 RY45_RS19165 RY45_RS19170 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RY45_RS19170 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RY45_RS19170 IPR011356 Leucine aminopeptidase/peptidase B RY45_RS19170 IPR023042 Peptidase M17, leucine aminopeptidase RY45_RS19175 IPR007459 DNA polymerase III chi subunit, HolC RY45_RS19180 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RY45_RS19180 IPR002300 Aminoacyl-tRNA synthetase, class Ia RY45_RS19180 IPR002303 Valine-tRNA ligase RY45_RS19180 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RY45_RS19180 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS19180 IPR010978 tRNA-binding arm RY45_RS19180 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RY45_RS19180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS19180 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RY45_RS19185 IPR000644 CBS domain RY45_RS19185 IPR002550 Domain of unknown function DUF21 RY45_RS19185 IPR005170 Transporter-associated domain RY45_RS19185 IPR016166 FAD-binding, type 2 RY45_RS19185 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS19190 IPR032816 RY45_RS19190 RY45_RS19190 IPR032818 RY45_RS19190 RY45_RS19195 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RY45_RS19195 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS19195 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RY45_RS19230 IPR003751 Carbon storage regulator RY45_RS19235 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS19235 IPR001057 Glutamate/acetylglutamate kinase RY45_RS19235 IPR001341 Aspartate kinase domain RY45_RS19235 IPR002912 ACT domain RY45_RS19235 IPR005260 Aspartate kinase, monofunctional class RY45_RS19235 IPR018042 Aspartate kinase, conserved site RY45_RS19235 IPR027795 GATS-like ACT domain RY45_RS19240 IPR002318 Alanine-tRNA ligase, class IIc RY45_RS19240 IPR003156 DHHA1 domain RY45_RS19240 IPR009000 Translation protein, beta-barrel domain RY45_RS19240 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RY45_RS19240 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RY45_RS19240 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RY45_RS19240 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RY45_RS19240 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RY45_RS19245 IPR003783 Regulatory protein RecX RY45_RS19245 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19250 IPR003593 AAA+ ATPase domain RY45_RS19250 IPR013765 DNA recombination and repair protein RecA RY45_RS19250 IPR020584 DNA recombination/repair protein RecA, conserved site RY45_RS19250 IPR023400 DNA recombination and repair protein RecA, C-terminal RY45_RS19250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19255 IPR008136 CinA, C-terminal RY45_RS19260 IPR000432 DNA mismatch repair protein MutS, C-terminal RY45_RS19260 IPR005748 DNA mismatch repair protein MutS, type 1 RY45_RS19260 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RY45_RS19260 IPR007696 DNA mismatch repair protein MutS, core RY45_RS19260 IPR007860 DNA mismatch repair protein MutS, connector domain RY45_RS19260 IPR007861 DNA mismatch repair protein MutS, clamp RY45_RS19260 IPR016151 DNA mismatch repair protein MutS, N-terminal RY45_RS19260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19265 IPR000060 BCCT transporter family RY45_RS19275 IPR000835 MarR-type HTH domain RY45_RS19275 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19280 IPR024445 Transposase, ISXO2-like RY45_RS19285 IPR007338 Protein of unknown function DUF416 RY45_RS19285 IPR023381 YP001051499.1-like domain RY45_RS19290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS19290 IPR016040 NAD(P)-binding domain RY45_RS19295 IPR007340 Opacity-associated protein A RY45_RS19295 IPR011055 Duplicated hybrid motif RY45_RS19295 IPR016047 Peptidase M23 RY45_RS19300 IPR032244 RY45_RS19300 RY45_RS19305 IPR011852 TRAP transporter solute receptor, TAXI family RY45_RS19310 IPR010319 Transglutaminase-like cysteine peptidase, predicted RY45_RS19315 IPR006127 Periplasmic solute binding protein family RY45_RS19315 IPR006128 Adhesion lipoprotein RY45_RS19320 IPR003439 ABC transporter-like RY45_RS19320 IPR003593 AAA+ ATPase domain RY45_RS19320 IPR017871 ABC transporter, conserved site RY45_RS19320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19325 IPR001626 ABC-3 RY45_RS19325 IPR029022 ABC transporter, BtuC-like RY45_RS19330 IPR000847 Transcription regulator HTH, LysR RY45_RS19330 IPR005119 LysR, substrate-binding RY45_RS19330 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19335 IPR000620 Drug/metabolite transporter RY45_RS19340 IPR005122 Uracil-DNA glycosylase-like RY45_RS19345 IPR000620 Drug/metabolite transporter RY45_RS19345 IPR004626 RarD protein RY45_RS19355 IPR000305 GIY-YIG nuclease superfamily RY45_RS19355 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease RY45_RS19360 IPR014318 Phage shock protein, PspG RY45_RS19365 IPR007168 Phage shock protein, PspC, N-terminal RY45_RS19370 IPR007157 PspA/IM30 RY45_RS19370 IPR014319 Phage shock protein, PspA RY45_RS19375 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS19375 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RY45_RS19385 IPR003834 Cytochrome c assembly protein, transmembrane domain RY45_RS19385 IPR012336 Thioredoxin-like fold RY45_RS19385 IPR017937 Thioredoxin, conserved site RY45_RS19385 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RY45_RS19390 IPR012336 Thioredoxin-like fold RY45_RS19390 IPR017937 Thioredoxin, conserved site RY45_RS19395 IPR012336 Thioredoxin-like fold RY45_RS19395 IPR013740 Redoxin RY45_RS19400 IPR001623 DnaJ domain RY45_RS19430 IPR011701 Major facilitator superfamily RY45_RS19430 IPR020846 Major facilitator superfamily domain RY45_RS19435 IPR000847 Transcription regulator HTH, LysR RY45_RS19435 IPR005119 LysR, substrate-binding RY45_RS19435 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19440 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RY45_RS19440 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RY45_RS19440 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RY45_RS19440 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RY45_RS19440 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS19440 IPR024946 Arginine repressor C-terminal-like domain RY45_RS19445 IPR001241 DNA topoisomerase, type IIA RY45_RS19445 IPR002288 DNA gyrase B subunit, C-terminal RY45_RS19445 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS19445 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RY45_RS19445 IPR006171 Toprim domain RY45_RS19445 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RY45_RS19445 IPR013759 DNA topoisomerase, type IIA, central domain RY45_RS19445 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS19445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS19445 IPR018522 DNA topoisomerase, type IIA, conserved site RY45_RS19445 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS19450 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RY45_RS19455 IPR006143 RND efflux pump, membrane fusion protein RY45_RS19460 IPR012451 Protein of unknown function DUF1656 RY45_RS19465 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RY45_RS19465 IPR011057 Mss4-like RY45_RS19470 IPR000086 NUDIX hydrolase domain RY45_RS19470 IPR015797 NUDIX hydrolase domain-like RY45_RS19475 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RY45_RS19475 IPR029058 Alpha/Beta hydrolase fold RY45_RS19480 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RY45_RS19480 IPR013622 Calcineurin-like phosphoesterase C-terminal RY45_RS19480 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RY45_RS19480 IPR029052 Metallo-dependent phosphatase-like RY45_RS19485 IPR009659 Protein of unknown function DUF1249 RY45_RS19490 IPR000086 NUDIX hydrolase domain RY45_RS19490 IPR004385 Nucleoside diphosphate pyrophosphatase RY45_RS19490 IPR015797 NUDIX hydrolase domain-like RY45_RS19490 IPR020084 NUDIX hydrolase, conserved site RY45_RS19495 IPR003423 Outer membrane efflux protein RY45_RS19495 IPR010130 Type I secretion outer membrane protein, TolC RY45_RS19500 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RY45_RS19500 IPR004821 Cytidyltransferase-like domain RY45_RS19500 IPR011611 Carbohydrate kinase PfkB RY45_RS19500 IPR011913 RfaE bifunctional protein, domain I RY45_RS19500 IPR011914 RfaE bifunctional protein, domain II RY45_RS19500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS19500 IPR023030 Bifunctional protein HldE RY45_RS19500 IPR029056 Ribokinase-like RY45_RS19505 IPR004960 Bacterial lipid A biosynthesis acyltransferase RY45_RS19505 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase RY45_RS19510 IPR006260 TonB, C-terminal RY45_RS19515 IPR023577 CYTH-like domain RY45_RS19515 IPR033469 RY45_RS19515 RY45_RS19520 IPR002727 Protein of unknown function DUF47 RY45_RS19520 IPR018445 Putitive phosphate transport regulator RY45_RS19525 IPR001204 Phosphate transporter RY45_RS19530 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RY45_RS19530 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RY45_RS19535 IPR010856 Protein of unknown function DUF1479 RY45_RS19535 IPR027443 Isopenicillin N synthase-like RY45_RS19540 IPR000182 GNAT domain RY45_RS19540 IPR016181 Acyl-CoA N-acyltransferase RY45_RS19545 IPR001307 Thiosulphate sulfurtransferase, conserved site RY45_RS19545 IPR001763 Rhodanese-like domain RY45_RS19550 IPR003718 OsmC/Ohr family RY45_RS19550 IPR015946 K homology domain-like, alpha/beta RY45_RS19555 IPR000524 Transcription regulator HTH, GntR RY45_RS19555 IPR004839 Aminotransferase, class I/classII RY45_RS19555 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19555 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS19555 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS19560 IPR000847 Transcription regulator HTH, LysR RY45_RS19560 IPR005119 LysR, substrate-binding RY45_RS19560 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19565 IPR005538 LrgA/CidA family RY45_RS19570 IPR007300 CidB/LrgB family RY45_RS19585 IPR002646 Poly A polymerase, head domain RY45_RS19585 IPR003607 HD/PDEase domain RY45_RS19585 IPR006674 HD domain RY45_RS19585 IPR012006 tRNA nucleotidyltransferase, proteobacteria RY45_RS19585 IPR032828 RY45_RS19585 RY45_RS19590 IPR002477 Peptidoglycan binding-like RY45_RS19590 IPR003593 AAA+ ATPase domain RY45_RS19590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19595 IPR032389 RY45_RS19595 RY45_RS19600 IPR000445 Helix-hairpin-helix motif RY45_RS19600 IPR003265 HhH-GPD domain RY45_RS19600 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RY45_RS19600 IPR004035 Endonuclease III, iron-sulphur binding site RY45_RS19600 IPR004036 Endonuclease III-like, conserved site-2 RY45_RS19600 IPR005760 A/G-specific adenine glycosylase MutY RY45_RS19600 IPR011257 DNA glycosylase RY45_RS19600 IPR015797 NUDIX hydrolase domain-like RY45_RS19600 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RY45_RS19600 IPR029119 MutY, C-terminal RY45_RS19605 IPR007457 Fe(II) trafficking protein YggX RY45_RS19610 IPR000189 Prokaryotic transglycosylase, active site RY45_RS19610 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS19610 IPR023346 Lysozyme-like domain RY45_RS19610 IPR024570 Murein transglycosylase-C, N-terminal RY45_RS19615 IPR005220 Viral OB-fold, YgiW RY45_RS19620 IPR001087 Lipase, GDSL RY45_RS19620 IPR008265 Lipase, GDSL, active site RY45_RS19620 IPR013830 RY45_RS19620 RY45_RS19625 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS19630 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain RY45_RS19630 IPR002368 Outer membrane protein, OmpA RY45_RS19630 IPR006664 Outer membrane protein, bacterial RY45_RS19630 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS19630 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS19630 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS19635 IPR005586 Protein of unknown function DUF330 RY45_RS19640 IPR003399 Mammalian cell entry-related RY45_RS19645 IPR005219 Conserved hypothetical protein CHP00155 RY45_RS19645 IPR007498 Paraquat-inducible protein A RY45_RS19650 IPR005001 Host factor Hfq RY45_RS19650 IPR010920 Like-Sm (LSM) domain RY45_RS19655 IPR006439 HAD hydrolase, subfamily IA RY45_RS19655 IPR010976 Beta-phosphoglucomutase hydrolase RY45_RS19655 IPR023198 Phosphoglycolate phosphatase, domain 2 RY45_RS19655 IPR023214 HAD-like domain RY45_RS19660 IPR013976 Metal-dependent hydrolase HDOD RY45_RS19665 IPR000160 GGDEF domain RY45_RS19665 IPR003018 GAF domain RY45_RS19665 IPR029016 GAF domain-like RY45_RS19665 IPR029787 Nucleotide cyclase RY45_RS19670 IPR002220 DapA-like RY45_RS19670 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RY45_RS19670 IPR013785 Aldolase-type TIM barrel RY45_RS19670 IPR020624 Dihydrodipicolinate synthetase, conserved site RY45_RS19670 IPR020625 Dihydrodipicolinate synthetase, active site RY45_RS19675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RY45_RS19675 IPR007848 Methyltransferase small domain RY45_RS19675 IPR013675 Methyltransferase small, N-terminal RY45_RS19675 IPR023543 rRNA small subunit methyltransferase C RY45_RS19675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS19680 IPR005835 Nucleotidyl transferase RY45_RS19680 IPR005836 ADP-glucose pyrophosphorylase, conserved site RY45_RS19680 IPR011004 Trimeric LpxA-like RY45_RS19680 IPR011831 Glucose-1-phosphate adenylyltransferase RY45_RS19680 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial RY45_RS19680 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS19685 IPR001296 Glycosyl transferase, family 1 RY45_RS19685 IPR011835 Glycogen/starch synthase, ADP-glucose type RY45_RS19685 IPR013534 Starch synthase, catalytic domain RY45_RS19715 IPR019657 Late competence development protein ComFB RY45_RS19725 IPR018461 Na+/H+ antiporter, NhaC-like RY45_RS19730 IPR000847 Transcription regulator HTH, LysR RY45_RS19730 IPR005119 LysR, substrate-binding RY45_RS19730 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19735 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RY45_RS19740 IPR003439 ABC transporter-like RY45_RS19740 IPR003593 AAA+ ATPase domain RY45_RS19740 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS19740 IPR012340 Nucleic acid-binding, OB-fold RY45_RS19740 IPR013611 Transport-associated OB, type 2 RY45_RS19740 IPR017871 ABC transporter, conserved site RY45_RS19740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19745 IPR000515 MetI-like domain RY45_RS19750 IPR000515 MetI-like domain RY45_RS19755 IPR015590 Aldehyde dehydrogenase domain RY45_RS19755 IPR015657 Aminobutyraldehyde dehydrogenase RY45_RS19755 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS19755 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS19755 IPR016163 Aldehyde dehydrogenase, C-terminal RY45_RS19755 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RY45_RS19765 IPR000620 Drug/metabolite transporter RY45_RS19770 IPR000485 AsnC-type HTH domain RY45_RS19770 IPR011008 Dimeric alpha-beta barrel RY45_RS19770 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19770 IPR019887 Transcription regulator AsnC-type, C-terminal RY45_RS19770 IPR019888 Transcription regulator AsnC-type RY45_RS19775 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS19775 IPR011004 Trimeric LpxA-like RY45_RS19775 IPR018357 Hexapeptide transferase, conserved site RY45_RS19775 IPR024688 Maltose/galactoside acetyltransferase RY45_RS19780 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS19780 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS19780 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS19780 IPR015902 Glycoside hydrolase, family 13 RY45_RS19780 IPR017853 Glycoside hydrolase, superfamily RY45_RS19780 IPR032091 RY45_RS19780 RY45_RS19785 IPR001996 Phosphotransferase system, IIB component, type 1 RY45_RS19785 IPR003352 Phosphotransferase system, EIIC RY45_RS19785 IPR011296 Phosphotransferase system, trehalose-specific IIBC component RY45_RS19785 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RY45_RS19790 IPR000843 Transcription regulator HTH, LacI RY45_RS19790 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS19790 IPR012771 Trehalose operon repressor RY45_RS19790 IPR028082 Periplasmic binding protein-like I RY45_RS19795 IPR004776 Auxin efflux carrier RY45_RS19800 IPR006121 Heavy metal-associated domain, HMA RY45_RS19800 IPR017969 Heavy-metal-associated, conserved site RY45_RS19805 IPR004550 L-asparaginase, type II RY45_RS19805 IPR006034 Asparaginase/glutaminase RY45_RS19805 IPR020827 Asparaginase/glutaminase, active site 1 RY45_RS19805 IPR027473 L-asparaginase, C-terminal domain RY45_RS19805 IPR027474 L-asparaginase, N-terminal RY45_RS19805 IPR027475 Asparaginase/glutaminase, active site 2 RY45_RS19810 IPR004837 Sodium/calcium exchanger membrane region RY45_RS19815 IPR025982 Superinfection exclusion protein B RY45_RS19820 IPR004363 Methylglyoxal synthase RY45_RS19820 IPR011607 Methylglyoxal synthase-like domain RY45_RS19820 IPR018148 Methylglyoxal synthase, active site RY45_RS19825 IPR010281 Protein of unknown function DUF885 RY45_RS19830 IPR002024 Bacterioferritin RY45_RS19830 IPR008331 Ferritin/DPS protein domain RY45_RS19830 IPR009078 Ferritin-like superfamily RY45_RS19830 IPR012347 Ferritin-related RY45_RS19835 IPR007419 BFD-like [2Fe-2S]-binding domain RY45_RS19840 IPR018772 Transcription activator HlyU RY45_RS19845 IPR000182 GNAT domain RY45_RS19845 IPR007807 Helicase domain RY45_RS19845 IPR013562 Domain of unknown function DUF1726 RY45_RS19845 IPR016181 Acyl-CoA N-acyltransferase RY45_RS19845 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA RY45_RS19845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19845 IPR032672 RY45_RS19845 RY45_RS19845 IPR033442 RY45_RS19845 RY45_RS19850 IPR002347 Glucose/ribitol dehydrogenase RY45_RS19850 IPR016040 NAD(P)-binding domain RY45_RS19855 IPR001789 Signal transduction response regulator, receiver domain RY45_RS19855 IPR002545 CheW-like protein RY45_RS19855 IPR011006 CheY-like superfamily RY45_RS19855 IPR024181 Chemotaxis response regulator CheV RY45_RS19865 IPR012550 Protein of unknown function DUF1706 RY45_RS19875 IPR013099 Two pore domain potassium channel domain RY45_RS19905 IPR006531 Gp5 N-terminal RY45_RS19905 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RY45_RS19905 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RY45_RS19910 IPR008514 Type VI secretion system effector, Hcp RY45_RS19935 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RY45_RS19940 IPR006156 Dihydroneopterin aldolase RY45_RS19940 IPR006157 Dihydroneopterin aldolase/epimerase domain RY45_RS19945 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RY45_RS19950 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RY45_RS19955 IPR004638 Drug resistance transporter EmrB/QacA subfamily RY45_RS19955 IPR011701 Major facilitator superfamily RY45_RS19955 IPR020846 Major facilitator superfamily domain RY45_RS19960 IPR003495 CobW/HypB/UreG domain RY45_RS19960 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RY45_RS19960 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS19965 IPR006094 FAD linked oxidase, N-terminal RY45_RS19965 IPR007173 D-arabinono-1,4-lactone oxidase RY45_RS19965 IPR016166 FAD-binding, type 2 RY45_RS19965 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS19970 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RY45_RS19975 IPR000847 Transcription regulator HTH, LysR RY45_RS19975 IPR005119 LysR, substrate-binding RY45_RS19975 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS19980 IPR001633 EAL domain RY45_RS19980 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RY45_RS19985 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RY45_RS19985 IPR004406 Aconitase B, bacterial RY45_RS19985 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RY45_RS19985 IPR015929 Aconitase B, N-terminal, bacterial RY45_RS19985 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RY45_RS19985 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RY45_RS19985 IPR015933 Aconitase B, HEAT-like, bacterial RY45_RS19985 IPR015937 Aconitase/isopropylmalate dehydratase RY45_RS19985 IPR018136 Aconitase family, 4Fe-4S cluster binding site RY45_RS19990 IPR002641 Patatin/Phospholipase A2-related RY45_RS19990 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RY45_RS20010 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY45_RS20010 IPR006258 Dihydrolipoamide dehydrogenase RY45_RS20010 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RY45_RS20010 IPR016156 FAD/NAD-linked reductase, dimerisation domain RY45_RS20010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS20015 IPR000089 Biotin/lipoyl attachment RY45_RS20015 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RY45_RS20015 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RY45_RS20015 IPR004167 E3 binding RY45_RS20015 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RY45_RS20015 IPR011053 Single hybrid motif RY45_RS20015 IPR023213 Chloramphenicol acetyltransferase-like domain RY45_RS20020 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RY45_RS20020 IPR005474 Transketolase, N-terminal RY45_RS20020 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RY45_RS20020 IPR029061 Thiamin diphosphate-binding fold RY45_RS20020 IPR033247 RY45_RS20020 RY45_RS20025 IPR000524 Transcription regulator HTH, GntR RY45_RS20025 IPR008920 Transcription regulator FadR/GntR, C-terminal RY45_RS20025 IPR011711 GntR, C-terminal RY45_RS20025 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20035 IPR001969 Aspartic peptidase, active site RY45_RS20035 IPR011969 Peptidase aspartic, CHP02281 RY45_RS20035 IPR021109 Aspartic peptidase domain RY45_RS20040 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RY45_RS20040 IPR004393 Nicotinate-nucleotide pyrophosphorylase RY45_RS20040 IPR013785 Aldolase-type TIM barrel RY45_RS20040 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RY45_RS20040 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RY45_RS20050 IPR001482 Type II secretion system protein E RY45_RS20050 IPR007831 General secretory system II, protein E, N-terminal RY45_RS20050 IPR013374 ATPase, type IV, pilus assembly, PilB RY45_RS20050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20055 IPR001992 Type II secretion system conserved site RY45_RS20055 IPR003004 GspF/PilC family RY45_RS20055 IPR018076 Type II secretion system F domain RY45_RS20060 IPR000045 Prepilin type IV endopeptidase, peptidase domain RY45_RS20060 IPR010627 Peptidase A24A, N-terminal RY45_RS20060 IPR014032 Peptidase A24A, prepilin type IV, bacterial RY45_RS20065 IPR001977 Dephospho-CoA kinase RY45_RS20065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20070 IPR009777 Cell division protein ZapD RY45_RS20070 IPR027462 Z ring-associated protein D, C-terminal domain RY45_RS20075 IPR005584 DNA gyrase inhibitor YacG RY45_RS20075 IPR013088 Zinc finger, NHR/GATA-type RY45_RS20080 IPR000086 NUDIX hydrolase domain RY45_RS20080 IPR003561 Mutator MutT RY45_RS20080 IPR015797 NUDIX hydrolase domain-like RY45_RS20080 IPR020084 NUDIX hydrolase, conserved site RY45_RS20080 IPR020476 NUDIX hydrolase RY45_RS20085 IPR011990 Tetratricopeptide-like helical domain RY45_RS20090 IPR000185 Protein translocase subunit SecA RY45_RS20090 IPR004027 SEC-C motif RY45_RS20090 IPR011115 SecA DEAD-like, N-terminal RY45_RS20090 IPR011116 SecA Wing/Scaffold RY45_RS20090 IPR011130 SecA preprotein, cross-linking domain RY45_RS20090 IPR020937 SecA conserved site RY45_RS20090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20095 IPR011055 Duplicated hybrid motif RY45_RS20095 IPR016047 Peptidase M23 RY45_RS20100 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RY45_RS20100 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RY45_RS20100 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RY45_RS20100 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS20105 IPR000158 Cell division protein FtsZ RY45_RS20105 IPR003008 Tubulin/FtsZ, GTPase domain RY45_RS20105 IPR008280 Tubulin/FtsZ, C-terminal RY45_RS20105 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RY45_RS20105 IPR020805 Cell division protein FtsZ, conserved site RY45_RS20105 IPR024757 Cell division protein FtsZ, C-terminal RY45_RS20110 IPR003494 SHS2 domain inserted in FtsA RY45_RS20110 IPR018181 Heat shock protein 70, conserved site RY45_RS20110 IPR020823 Cell division protein FtsA RY45_RS20115 IPR005548 Cell division protein FtsQ/DivIB RY45_RS20115 IPR013685 Polypeptide-transport-associated, FtsQ-type RY45_RS20115 IPR026579 Cell division protein FtsQ RY45_RS20120 IPR000713 Mur ligase, N-terminal RY45_RS20120 IPR004101 Mur ligase, C-terminal RY45_RS20120 IPR005758 UDP-N-acetylmuramate-alanine ligase RY45_RS20120 IPR013221 Mur ligase, central RY45_RS20120 IPR016040 NAD(P)-binding domain RY45_RS20125 IPR004276 Glycosyl transferase, family 28 RY45_RS20125 IPR006009 N-acetylglucosaminyltransferase, MurG RY45_RS20125 IPR007235 Glycosyl transferase, family 28, C-terminal RY45_RS20130 IPR001182 Cell cycle protein FtsW/RodA RY45_RS20130 IPR013437 Cell division protein FtsW RY45_RS20130 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RY45_RS20135 IPR004101 Mur ligase, C-terminal RY45_RS20135 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RY45_RS20135 IPR013221 Mur ligase, central RY45_RS20135 IPR016040 NAD(P)-binding domain RY45_RS20140 IPR000715 Glycosyl transferase, family 4 RY45_RS20140 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RY45_RS20140 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RY45_RS20145 IPR000713 Mur ligase, N-terminal RY45_RS20145 IPR004101 Mur ligase, C-terminal RY45_RS20145 IPR005863 UDP-MurNAc-pentapeptide synthetase RY45_RS20145 IPR013221 Mur ligase, central RY45_RS20150 IPR000713 Mur ligase, N-terminal RY45_RS20150 IPR004101 Mur ligase, C-terminal RY45_RS20150 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RY45_RS20150 IPR013221 Mur ligase, central RY45_RS20155 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS20155 IPR005311 Penicillin-binding protein, dimerisation domain RY45_RS20155 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS20160 IPR011922 Cell division protein FtsL RY45_RS20165 IPR002903 Ribosomal RNA small subunit methyltransferase H RY45_RS20165 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RY45_RS20165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS20170 IPR003444 MraZ RY45_RS20170 IPR020603 MraZ domain RY45_RS20180 IPR008258 Lytic transglycosylase-like SLT domain RY45_RS20180 IPR023346 Lysozyme-like domain RY45_RS20185 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS20185 IPR025713 Motility protein B, N-terminal domain RY45_RS20190 IPR000540 Flagellar motor protein MotA, conserved site RY45_RS20190 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS20190 IPR022522 Flagellar motor stator, MotA RY45_RS20195 IPR000943 RNA polymerase sigma-70 RY45_RS20195 IPR007624 RNA polymerase sigma-70 region 3 RY45_RS20195 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS20195 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS20195 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20195 IPR012845 RNA polymerase sigma factor, FliA/WhiG RY45_RS20195 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS20195 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS20195 IPR014284 RNA polymerase sigma-70 like domain RY45_RS20200 IPR005503 Flagellar basal body-associated protein FliL RY45_RS20205 IPR021136 Flagellar hook-length control protein-like, C-terminal RY45_RS20215 IPR003713 Flagellar protein FliS RY45_RS20220 IPR003481 Flagellar hook-associated protein 2, N-terminal RY45_RS20220 IPR010809 Flagellar hook-associated 2, C-terminal RY45_RS20220 IPR010810 Flagellin hook, IN motif RY45_RS20225 IPR001029 Flagellin, D0/D1 domain RY45_RS20225 IPR001492 Flagellin RY45_RS20235 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like RY45_RS20245 IPR001029 Flagellin, D0/D1 domain RY45_RS20245 IPR013384 Flagellar hook-associated protein 3 RY45_RS20250 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS20250 IPR002371 Flagellar hook-associated protein, FlgK RY45_RS20250 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS20255 IPR019301 Flagellar protein FlgJ, N-terminal RY45_RS20260 IPR001782 Flagellar P-ring protein RY45_RS20265 IPR000527 Flagellar L-ring protein RY45_RS20270 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS20270 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS20270 IPR012834 Flagellar basal-body rod FlgG RY45_RS20270 IPR019776 Flagellar basal body rod protein, conserved site RY45_RS20270 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS20275 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS20275 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS20275 IPR012836 Flagellar basal-body rod FlgF RY45_RS20275 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS20280 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS20280 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS20280 IPR011491 Flagellar basal body FlaE RY45_RS20280 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RY45_RS20285 IPR005648 Flagellar hook capping protein RY45_RS20285 IPR025963 FlgD Tudor-like domain RY45_RS20285 IPR025965 FlgD Ig-like domain RY45_RS20290 IPR001444 Flagellar basal body rod protein, N-terminal RY45_RS20290 IPR006299 Flagellar basal-body rod protein FlgC RY45_RS20290 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RY45_RS20295 IPR006300 Flagellar basal-body rod protein FlgB RY45_RS20300 IPR013974 SAF domain RY45_RS20300 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RY45_RS20305 IPR007412 Anti-sigma-28 factor, FlgM RY45_RS20305 IPR031316 RY45_RS20305 RY45_RS20310 IPR007809 FlgN-like domain RY45_RS20315 IPR012823 Flagellar export FliJ RY45_RS20320 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS20320 IPR005714 ATPase, type III secretion system, FliI/YscN RY45_RS20320 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RY45_RS20320 IPR020005 Flagellar export ATPase FliI, clade 1 RY45_RS20320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20320 IPR032463 RY45_RS20320 RY45_RS20325 IPR000563 Flagellar assembly protein FliH RY45_RS20325 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RY45_RS20330 IPR000090 Flagellar motor switch protein FliG RY45_RS20330 IPR011002 Flagellar motor switch protein FliG, alpha-helical RY45_RS20330 IPR023087 RY45_RS20330 RY45_RS20330 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RY45_RS20330 IPR032779 RY45_RS20330 RY45_RS20335 IPR000067 Flagellar M-ring protein FliF RY45_RS20335 IPR006182 Secretory protein YscJ/FliF RY45_RS20335 IPR013556 Flagellar M-ring C-terminal RY45_RS20340 IPR001624 Flagellar hook-basal body complex protein FliE RY45_RS20345 IPR001789 Signal transduction response regulator, receiver domain RY45_RS20345 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS20345 IPR002197 DNA binding HTH domain, Fis-type RY45_RS20345 IPR003593 AAA+ ATPase domain RY45_RS20345 IPR009057 Homeodomain-like RY45_RS20345 IPR011006 CheY-like superfamily RY45_RS20345 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RY45_RS20345 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RY45_RS20345 IPR025944 Sigma-54 interaction domain, conserved site RY45_RS20345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20345 IPR029995 RY45_RS20345 RY45_RS20350 IPR001712 Type III secretion system FHIPEP RY45_RS20350 IPR006301 Flagellar biosynthesis protein FlhA RY45_RS20350 IPR025505 FHIPEP conserved site RY45_RS20355 IPR006135 Type III secretion system substrate exporter RY45_RS20355 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB RY45_RS20355 IPR029025 Type III secretion system substrate exporter, C-terminal RY45_RS20360 IPR002010 Type III secretion system inner membrane R protein RY45_RS20360 IPR006303 Flagellar biosynthesis protein FliR RY45_RS20365 IPR002191 Bacterial export protein family 3 RY45_RS20370 IPR005837 Flagellar transport protein FliP RY45_RS20370 IPR005838 Type III secretion system inner membrane P protein RY45_RS20375 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RY45_RS20375 IPR001543 Surface presentation of antigen (SpoA) RY45_RS20375 IPR012826 Flagellar motor switch FliN RY45_RS20380 IPR001543 Surface presentation of antigen (SpoA) RY45_RS20385 IPR000878 Tetrapyrrole methylase RY45_RS20385 IPR008189 rRNA small subunit methyltransferase I RY45_RS20385 IPR014776 Tetrapyrrole methylase, subdomain 2 RY45_RS20385 IPR014777 Tetrapyrrole methylase, subdomain 1 RY45_RS20385 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RY45_RS20390 IPR007443 Penicillin-binding protein activator LpoA RY45_RS20390 IPR028082 Periplasmic binding protein-like I RY45_RS20395 IPR003509 Uncharacterised protein family UPF0102 RY45_RS20395 IPR011335 Restriction endonuclease type II-like RY45_RS20395 IPR011856 tRNA endonuclease-like domain RY45_RS20400 IPR001347 Sugar isomerase (SIS) RY45_RS20405 IPR007055 BON domain RY45_RS20405 IPR014004 Transport-associated and nodulation domain, bacteria RY45_RS20410 IPR007481 Stringent starvation protein B RY45_RS20415 IPR004045 Glutathione S-transferase, N-terminal RY45_RS20415 IPR004046 Glutathione S-transferase, C-terminal RY45_RS20415 IPR010987 Glutathione S-transferase, C-terminal-like RY45_RS20415 IPR012336 Thioredoxin-like fold RY45_RS20420 IPR002326 Cytochrome c1 RY45_RS20420 IPR009056 Cytochrome c-like domain RY45_RS20425 IPR005798 Cytochrome b/b6, C-terminal RY45_RS20425 IPR016174 Di-haem cytochrome, transmembrane RY45_RS20425 IPR027387 Cytochrome b/b6-like domain RY45_RS20425 IPR030689 RY45_RS20425 RY45_RS20430 IPR005805 Rieske iron-sulphur protein, C-terminal RY45_RS20430 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RY45_RS20430 IPR014349 Rieske iron-sulphur protein RY45_RS20430 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RY45_RS20430 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal RY45_RS20435 IPR000754 Ribosomal protein S9 RY45_RS20435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS20435 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS20435 IPR020574 Ribosomal protein S9, conserved site RY45_RS20435 IPR023035 Ribosomal protein S9, bacterial/plastid RY45_RS20440 IPR005822 Ribosomal protein L13 RY45_RS20440 IPR005823 Ribosomal protein L13, bacterial-type RY45_RS20440 IPR023563 Ribosomal protein L13, conserved site RY45_RS20440 IPR023564 Ribosomal protein L13 domain RY45_RS20445 IPR005654 ATPase, AFG1-like RY45_RS20445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20445 IPR030870 RY45_RS20445 RY45_RS20450 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RY45_RS20450 IPR009386 Protein of unknown function DUF1043 RY45_RS20455 IPR001478 PDZ domain RY45_RS20455 IPR001940 Peptidase S1C RY45_RS20455 IPR009003 Trypsin-like cysteine/serine peptidase domain RY45_RS20455 IPR011782 Peptidase S1C, Do RY45_RS20460 IPR001478 PDZ domain RY45_RS20460 IPR001940 Peptidase S1C RY45_RS20460 IPR009003 Trypsin-like cysteine/serine peptidase domain RY45_RS20460 IPR011783 Peptidase S1C, DegS RY45_RS20465 IPR011608 PRD domain RY45_RS20465 IPR020044 PRD domain protein, EF0829/AHA3910 RY45_RS20470 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 RY45_RS20475 IPR020037 Protein of unknown function DUF4312 RY45_RS20480 IPR020042 Protein of unknown function DUF4311 RY45_RS20485 IPR025456 Protein of unknown function DUF4310 RY45_RS20490 IPR006680 Amidohydrolase 1 RY45_RS20490 IPR011059 Metal-dependent hydrolase, composite domain RY45_RS20490 IPR020043 Amidohydrolase EF0837/AHA3915, putative RY45_RS20490 IPR032466 RY45_RS20490 RY45_RS20495 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS20495 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS20495 IPR018319 L-seryl-tRNA selenium transferase-like RY45_RS20500 IPR010763 Protein of unknown function DUF1341 RY45_RS20505 IPR002178 PTS EIIA type-2 domain RY45_RS20505 IPR007737 Mga helix-turn-helix domain RY45_RS20505 IPR011608 PRD domain RY45_RS20505 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20505 IPR013196 Helix-turn-helix, type 11 RY45_RS20505 IPR016152 Phosphotransferase/anion transporter RY45_RS20510 IPR000032 Phosphocarrier HPr protein-like RY45_RS20510 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RY45_RS20510 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RY45_RS20515 IPR005337 ATPase, P-loop-containing RY45_RS20515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20520 IPR002178 PTS EIIA type-2 domain RY45_RS20520 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN RY45_RS20520 IPR016152 Phosphotransferase/anion transporter RY45_RS20525 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RY45_RS20530 IPR000394 RNA polymerase sigma factor 54 RY45_RS20530 IPR007046 RNA polymerase sigma factor 54, core-binding RY45_RS20530 IPR007634 RNA polymerase sigma factor 54, DNA-binding RY45_RS20535 IPR003439 ABC transporter-like RY45_RS20535 IPR003593 AAA+ ATPase domain RY45_RS20535 IPR017871 ABC transporter, conserved site RY45_RS20535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20535 IPR030921 RY45_RS20535 RY45_RS20535 IPR032823 RY45_RS20535 RY45_RS20540 IPR005653 Organic solvent tolerance-like, N-terminal RY45_RS20540 IPR014340 Lipopolysaccharide assembly, LptA RY45_RS20545 IPR010664 Lipopolysaccharide assembly, LptC-related RY45_RS20545 IPR026265 Lipopolysaccharide export system protein LptC RY45_RS20550 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase RY45_RS20550 IPR023214 HAD-like domain RY45_RS20555 IPR000644 CBS domain RY45_RS20555 IPR001347 Sugar isomerase (SIS) RY45_RS20555 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RY45_RS20560 IPR003439 ABC transporter-like RY45_RS20560 IPR003593 AAA+ ATPase domain RY45_RS20560 IPR017871 ABC transporter, conserved site RY45_RS20560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20565 IPR003453 Permease domain RY45_RS20565 IPR030802 RY45_RS20565 RY45_RS20570 IPR003399 Mammalian cell entry-related RY45_RS20570 IPR030970 RY45_RS20570 RY45_RS20575 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RY45_RS20575 IPR023094 Toluene tolerance protein, alpha-helical RY45_RS20575 IPR032710 RY45_RS20575 RY45_RS20580 IPR002645 STAS domain RY45_RS20585 IPR002634 BolA protein RY45_RS20590 IPR001986 Enolpyruvate transferase domain RY45_RS20590 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RY45_RS20590 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RY45_RS20595 IPR002510 TldD/PmbA RY45_RS20600 IPR006839 Ribosome-associated, YjgA RY45_RS20600 IPR023153 PSPTO4464-like domain RY45_RS20605 IPR001264 Glycosyl transferase, family 51 RY45_RS20605 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS20605 IPR023346 Lysozyme-like domain RY45_RS20610 IPR007458 Protein of unknown function DUF496 RY45_RS20635 IPR010266 NnrS RY45_RS20640 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS20640 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS20640 IPR011051 RmlC-like cupin domain RY45_RS20640 IPR013096 Cupin 2, conserved barrel RY45_RS20640 IPR014710 RmlC-like jelly roll fold RY45_RS20645 IPR004711 Benzoate transporter RY45_RS20650 IPR021452 Protein of unknown function DUF3103 RY45_RS20655 IPR003171 Methylenetetrahydrofolate reductase RY45_RS20655 IPR004620 5,10-methylenetetrahydrofolate reductase RY45_RS20655 IPR029041 FAD-linked oxidoreductase-like RY45_RS20660 IPR000182 GNAT domain RY45_RS20660 IPR016181 Acyl-CoA N-acyltransferase RY45_RS20665 IPR006059 Bacterial extracellular solute-binding, family 1 RY45_RS20665 IPR006061 Bacterial extracellular solute-binding family 1, conserved site RY45_RS20670 IPR003660 HAMP linker domain RY45_RS20670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS20670 IPR024478 4HB MCP domain RY45_RS20675 IPR000758 Virulence-related outer membrane protein RY45_RS20675 IPR005618 Outer membrane protein, OmpW RY45_RS20675 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS20680 IPR000160 GGDEF domain RY45_RS20680 IPR007892 CHASE4 RY45_RS20680 IPR029787 Nucleotide cyclase RY45_RS20685 IPR003439 ABC transporter-like RY45_RS20685 IPR004602 UvrABC system subunit A RY45_RS20685 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS20685 IPR017871 ABC transporter, conserved site RY45_RS20685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20690 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS20690 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20690 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS20695 IPR000424 Primosome PriB/single-strand DNA-binding RY45_RS20695 IPR011344 Single-stranded DNA-binding protein RY45_RS20695 IPR012340 Nucleic acid-binding, OB-fold RY45_RS20700 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS20705 IPR002524 Cation efflux protein RY45_RS20705 IPR027469 Cation efflux protein transmembrane domain RY45_RS20705 IPR027470 Cation efflux protein cytoplasmic domain RY45_RS20710 IPR020317 Uncharacterised protein family YjbD RY45_RS20715 IPR002059 Cold-shock protein, DNA-binding RY45_RS20715 IPR011129 Cold shock protein RY45_RS20715 IPR012156 Cold shock, CspA RY45_RS20715 IPR012340 Nucleic acid-binding, OB-fold RY45_RS20715 IPR019844 Cold-shock conserved site RY45_RS20725 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS20725 IPR012910 TonB-dependent receptor, plug RY45_RS20730 IPR000160 GGDEF domain RY45_RS20730 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS20730 IPR029787 Nucleotide cyclase RY45_RS20735 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS20735 IPR003660 HAMP linker domain RY45_RS20735 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS20735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS20740 IPR001789 Signal transduction response regulator, receiver domain RY45_RS20740 IPR001867 Signal transduction response regulator, C-terminal RY45_RS20740 IPR011006 CheY-like superfamily RY45_RS20740 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20740 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS20765 IPR000014 PAS domain RY45_RS20765 IPR000160 GGDEF domain RY45_RS20765 IPR013655 PAS fold-3 RY45_RS20765 IPR029787 Nucleotide cyclase RY45_RS20770 IPR003313 AraC-type arabinose-binding/dimerisation domain RY45_RS20770 IPR009057 Homeodomain-like RY45_RS20770 IPR018060 DNA binding HTH domain, AraC-type RY45_RS20770 IPR018062 HTH domain AraC-type, conserved site RY45_RS20770 IPR020449 Transcription regulator HTH, AraC- type RY45_RS20775 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RY45_RS20775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS20785 IPR006344 Exodeoxyribonuclease V, alpha subunit RY45_RS20785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20785 IPR027785 UvrD-like helicase C-terminal domain RY45_RS20790 IPR000212 DNA helicase, UvrD/REP type RY45_RS20790 IPR004586 Exodeoxyribonuclease V, beta subunit RY45_RS20790 IPR011335 Restriction endonuclease type II-like RY45_RS20790 IPR011604 Exonuclease, phage-type/RecB, C-terminal RY45_RS20790 IPR014016 UvrD-like Helicase, ATP-binding domain RY45_RS20790 IPR014017 DNA helicase, UvrD-like, C-terminal RY45_RS20790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20795 IPR006697 Exodeoxyribonuclease V, gamma subunit RY45_RS20795 IPR011335 Restriction endonuclease type II-like RY45_RS20795 IPR013986 DExx box DNA helicase domain RY45_RS20795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20800 IPR032808 RY45_RS20800 RY45_RS20805 IPR003829 Pirin, N-terminal domain RY45_RS20805 IPR011051 RmlC-like cupin domain RY45_RS20805 IPR012093 Pirin RY45_RS20805 IPR014710 RmlC-like jelly roll fold RY45_RS20815 IPR000847 Transcription regulator HTH, LysR RY45_RS20815 IPR005119 LysR, substrate-binding RY45_RS20815 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20820 IPR001387 Cro/C1-type helix-turn-helix domain RY45_RS20820 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS20825 IPR000524 Transcription regulator HTH, GntR RY45_RS20825 IPR011663 UbiC transcription regulator-associated RY45_RS20825 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20825 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RY45_RS20835 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase RY45_RS20835 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RY45_RS20835 IPR017850 Alkaline-phosphatase-like, core domain RY45_RS20840 IPR000515 MetI-like domain RY45_RS20845 IPR000515 MetI-like domain RY45_RS20850 IPR003439 ABC transporter-like RY45_RS20850 IPR003593 AAA+ ATPase domain RY45_RS20850 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS20850 IPR013611 Transport-associated OB, type 2 RY45_RS20850 IPR017871 ABC transporter, conserved site RY45_RS20850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20855 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RY45_RS20855 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RY45_RS20855 IPR023214 HAD-like domain RY45_RS20860 IPR000160 GGDEF domain RY45_RS20860 IPR029151 Periplasmic sensor domain-like RY45_RS20860 IPR029787 Nucleotide cyclase RY45_RS20860 IPR033479 RY45_RS20860 RY45_RS20865 IPR018706 Protein of unknown function DUF2214, membrane RY45_RS20870 IPR000620 Drug/metabolite transporter RY45_RS20875 IPR009057 Homeodomain-like RY45_RS20875 IPR010499 Bacterial transcription activator, effector binding RY45_RS20875 IPR011256 Regulatory factor, effector binding domain RY45_RS20875 IPR018060 DNA binding HTH domain, AraC-type RY45_RS20875 IPR018062 HTH domain AraC-type, conserved site RY45_RS20875 IPR020449 Transcription regulator HTH, AraC- type RY45_RS20875 IPR029442 GyrI-like small molecule binding domain RY45_RS20880 IPR000182 GNAT domain RY45_RS20880 IPR016181 Acyl-CoA N-acyltransferase RY45_RS20885 IPR002226 Catalase haem-binding site RY45_RS20885 IPR010582 Catalase immune-responsive domain RY45_RS20885 IPR011614 Catalase core domain RY45_RS20885 IPR018028 Catalase, mono-functional, haem-containing RY45_RS20885 IPR020835 Catalase-like domain RY45_RS20885 IPR024708 Catalase active site RY45_RS20885 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RY45_RS20890 IPR009971 Protein of unknown function DUF1496 RY45_RS20900 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS20910 IPR000086 NUDIX hydrolase domain RY45_RS20910 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RY45_RS20910 IPR015797 NUDIX hydrolase domain-like RY45_RS20910 IPR020084 NUDIX hydrolase, conserved site RY45_RS20910 IPR020476 NUDIX hydrolase RY45_RS20910 IPR033138 RY45_RS20910 RY45_RS20915 IPR002549 Uncharacterised protein family UPF0118 RY45_RS20930 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type RY45_RS20930 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RY45_RS20935 IPR000847 Transcription regulator HTH, LysR RY45_RS20935 IPR005119 LysR, substrate-binding RY45_RS20935 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS20940 IPR000014 PAS domain RY45_RS20940 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS20940 IPR002197 DNA binding HTH domain, Fis-type RY45_RS20940 IPR009057 Homeodomain-like RY45_RS20940 IPR013767 PAS fold RY45_RS20940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS20945 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS20945 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS20950 IPR000032 Phosphocarrier HPr protein-like RY45_RS20950 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RY45_RS20950 IPR004701 Phosphotransferase system, mannose-type IIA component RY45_RS20950 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RY45_RS20955 IPR004007 DhaL domain RY45_RS20960 IPR004006 Dak kinase RY45_RS20965 IPR024445 Transposase, ISXO2-like RY45_RS20970 IPR006043 Xanthine/uracil/vitamin C permease RY45_RS20975 IPR011051 RmlC-like cupin domain RY45_RS20975 IPR013096 Cupin 2, conserved barrel RY45_RS20975 IPR014710 RmlC-like jelly roll fold RY45_RS21005 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RY45_RS21005 IPR006543 Histidinol-phosphate phosphatase RY45_RS21005 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RY45_RS21005 IPR023214 HAD-like domain RY45_RS21010 IPR000795 Elongation factor, GTP-binding domain RY45_RS21010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RY45_RS21010 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS21010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RY45_RS21010 IPR005225 Small GTP-binding protein domain RY45_RS21010 IPR009000 Translation protein, beta-barrel domain RY45_RS21010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RY45_RS21010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21010 IPR031157 RY45_RS21010 RY45_RS21015 IPR000640 Translation elongation factor EFG, V domain RY45_RS21015 IPR000795 Elongation factor, GTP-binding domain RY45_RS21015 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS21015 IPR004540 Translation elongation factor EFG/EF2 RY45_RS21015 IPR005225 Small GTP-binding protein domain RY45_RS21015 IPR005517 Translation elongation factor EFG/EF2, domain IV RY45_RS21015 IPR009000 Translation protein, beta-barrel domain RY45_RS21015 IPR009022 Elongation factor G, III-V domain RY45_RS21015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS21015 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS21015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21015 IPR031157 RY45_RS21015 RY45_RS21020 IPR000235 Ribosomal protein S5/S7 RY45_RS21020 IPR005717 Ribosomal protein S7, bacterial/organellar-type RY45_RS21020 IPR020606 Ribosomal protein S7, conserved site RY45_RS21020 IPR023798 Ribosomal protein S7 domain RY45_RS21030 IPR007215 Sulphur relay, TusB/DsrH RY45_RS21030 IPR027396 DsrEFH-like RY45_RS21035 IPR003787 Sulphur relay, DsrE/F-like protein RY45_RS21035 IPR017462 Sulphur relay, TusC/DsrF RY45_RS21035 IPR027396 DsrEFH-like RY45_RS21040 IPR003787 Sulphur relay, DsrE/F-like protein RY45_RS21040 IPR017463 Sulphur relay, TusD/DsrE RY45_RS21040 IPR027396 DsrEFH-like RY45_RS21045 IPR006056 Enamine/imine deaminase YjgF-like RY45_RS21045 IPR006175 YjgF/Yer057p/UK114 family RY45_RS21045 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RY45_RS21050 IPR013559 YheO-like RY45_RS21055 IPR000722 RNA polymerase, alpha subunit RY45_RS21055 IPR006592 RNA polymerase, N-terminal RY45_RS21055 IPR007066 RNA polymerase Rpb1, domain 3 RY45_RS21055 IPR007080 RNA polymerase Rpb1, domain 1 RY45_RS21055 IPR007081 RNA polymerase Rpb1, domain 5 RY45_RS21055 IPR007083 RNA polymerase Rpb1, domain 4 RY45_RS21055 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RY45_RS21060 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RY45_RS21060 IPR007121 RNA polymerase, beta subunit, conserved site RY45_RS21060 IPR007641 RNA polymerase Rpb2, domain 7 RY45_RS21060 IPR007642 RNA polymerase Rpb2, domain 2 RY45_RS21060 IPR007644 RNA polymerase, beta subunit, protrusion RY45_RS21060 IPR007645 RNA polymerase Rpb2, domain 3 RY45_RS21060 IPR010243 DNA-directed RNA polymerase, beta subunit RY45_RS21060 IPR014724 RNA polymerase Rpb2, OB-fold RY45_RS21060 IPR015712 DNA-directed RNA polymerase, subunit 2 RY45_RS21060 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RY45_RS21065 IPR000206 Ribosomal protein L7/L12 RY45_RS21065 IPR008932 Ribosomal protein L7/L12, oligomerisation RY45_RS21065 IPR013823 Ribosomal protein L7/L12, C-terminal RY45_RS21065 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RY45_RS21070 IPR001790 Ribosomal protein L10/acidic P0 RY45_RS21070 IPR002363 Ribosomal protein L10, eubacterial, conserved site RY45_RS21070 IPR022973 Ribosomal protein L10 RY45_RS21075 IPR002143 Ribosomal protein L1 RY45_RS21075 IPR005878 Ribosomal protein L1, bacterial-type RY45_RS21075 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RY45_RS21075 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RY45_RS21075 IPR023673 Ribosomal protein L1, conserved site RY45_RS21075 IPR023674 Ribosomal protein L1-like RY45_RS21075 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RY45_RS21080 IPR000911 Ribosomal protein L11/L12 RY45_RS21080 IPR006519 Ribosomal protein L11, bacterial-type RY45_RS21080 IPR020783 Ribosomal protein L11, C-terminal RY45_RS21080 IPR020784 Ribosomal protein L11, N-terminal RY45_RS21080 IPR020785 Ribosomal protein L11, conserved site RY45_RS21085 IPR001062 Transcription antitermination protein, NusG RY45_RS21085 IPR005824 KOW RY45_RS21085 IPR006645 NusG, N-terminal RY45_RS21085 IPR008991 Translation protein SH3-like domain RY45_RS21085 IPR014722 Ribosomal protein L2 domain 2 RY45_RS21085 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RY45_RS21090 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RY45_RS21090 IPR005807 SecE subunit of protein translocation complex RY45_RS21090 IPR022943 Preprotein translocase subunit SecE RY45_RS21100 IPR000795 Elongation factor, GTP-binding domain RY45_RS21100 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RY45_RS21100 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RY45_RS21100 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RY45_RS21100 IPR005225 Small GTP-binding protein domain RY45_RS21100 IPR009000 Translation protein, beta-barrel domain RY45_RS21100 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RY45_RS21100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21100 IPR031157 RY45_RS21100 RY45_RS21115 IPR004566 Bacterial pantothenate kinase RY45_RS21115 IPR006083 Phosphoribulokinase/uridine kinase RY45_RS21115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21120 IPR003142 Biotin protein ligase, C-terminal RY45_RS21120 IPR004143 Biotin/lipoate A/B protein ligase RY45_RS21120 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RY45_RS21120 IPR008988 Transcriptional repressor, C-terminal RY45_RS21120 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21120 IPR013196 Helix-turn-helix, type 11 RY45_RS21120 IPR030855 RY45_RS21120 RY45_RS21125 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RY45_RS21125 IPR006094 FAD linked oxidase, N-terminal RY45_RS21125 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RY45_RS21125 IPR016166 FAD-binding, type 2 RY45_RS21125 IPR016167 FAD-binding, type 2, subdomain 1 RY45_RS21125 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RY45_RS21130 IPR003148 Regulator of K+ conductance, N-terminal RY45_RS21130 IPR006037 Regulator of K+ conductance, C-terminal RY45_RS21130 IPR016040 NAD(P)-binding domain RY45_RS21135 IPR003445 Cation transporter RY45_RS21135 IPR004772 Potassium uptake protein TrkH family RY45_RS21140 IPR000380 DNA topoisomerase, type IA RY45_RS21140 IPR003601 DNA topoisomerase, type IA, domain 2 RY45_RS21140 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RY45_RS21140 IPR005738 DNA topoisomerase III RY45_RS21140 IPR006171 Toprim domain RY45_RS21140 IPR013497 DNA topoisomerase, type IA, central RY45_RS21140 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RY45_RS21140 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RY45_RS21140 IPR023405 DNA topoisomerase, type IA, core domain RY45_RS21140 IPR023406 DNA topoisomerase, type IA, active site RY45_RS21145 IPR005126 NapC/NirT cytochrome c, N-terminal RY45_RS21145 IPR009056 Cytochrome c-like domain RY45_RS21145 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK RY45_RS21145 IPR011031 Multihaem cytochrome RY45_RS21150 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RY45_RS21150 IPR006656 Molybdopterin oxidoreductase RY45_RS21150 IPR006657 Molydopterin dinucleotide-binding domain RY45_RS21150 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase RY45_RS21150 IPR009010 Aspartate decarboxylase-like domain RY45_RS21150 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RY45_RS21160 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS21160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS21165 IPR001789 Signal transduction response regulator, receiver domain RY45_RS21165 IPR001867 Signal transduction response regulator, C-terminal RY45_RS21165 IPR011006 CheY-like superfamily RY45_RS21165 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21175 IPR025711 PepSY domain RY45_RS21180 IPR013130 Ferric reductase transmembrane component-like domain RY45_RS21185 IPR000572 Oxidoreductase, molybdopterin-binding domain RY45_RS21185 IPR022867 Sulphoxide reductase catalytic subunit YedY RY45_RS21190 IPR009476 Protein of unknown function DUF1097 RY45_RS21195 IPR001789 Signal transduction response regulator, receiver domain RY45_RS21195 IPR002078 RNA polymerase sigma factor 54 interaction domain RY45_RS21195 IPR003593 AAA+ ATPase domain RY45_RS21195 IPR009057 Homeodomain-like RY45_RS21195 IPR011006 CheY-like superfamily RY45_RS21195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21205 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS21205 IPR003660 HAMP linker domain RY45_RS21205 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS21205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS21210 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RY45_RS21215 IPR002347 Glucose/ribitol dehydrogenase RY45_RS21215 IPR016040 NAD(P)-binding domain RY45_RS21215 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS21220 IPR000644 CBS domain RY45_RS21225 IPR019275 Protein of unknown function DUF2301 RY45_RS21230 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS21235 IPR000485 AsnC-type HTH domain RY45_RS21235 IPR011008 Dimeric alpha-beta barrel RY45_RS21235 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21235 IPR019887 Transcription regulator AsnC-type, C-terminal RY45_RS21235 IPR019888 Transcription regulator AsnC-type RY45_RS21240 IPR004618 Aspartate--ammonia ligase RY45_RS21245 IPR001279 Beta-lactamase-like RY45_RS21250 IPR001270 ClpA/B family RY45_RS21250 IPR003593 AAA+ ATPase domain RY45_RS21250 IPR003959 ATPase, AAA-type, core RY45_RS21250 IPR004176 Clp, N-terminal RY45_RS21250 IPR017730 Chaperonin ClpB RY45_RS21250 IPR018368 ClpA/B, conserved site 1 RY45_RS21250 IPR019489 Clp ATPase, C-terminal RY45_RS21250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21250 IPR028299 ClpA/B, conserved site 2 RY45_RS21255 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RY45_RS21255 IPR011324 Cytotoxic necrotizing factor-like, catalytic RY45_RS21260 IPR002942 RNA-binding S4 domain RY45_RS21260 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RY45_RS21260 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RY45_RS21260 IPR006225 Pseudouridine synthase, RluC/RluD RY45_RS21260 IPR020103 Pseudouridine synthase, catalytic domain RY45_RS21265 IPR011990 Tetratricopeptide-like helical domain RY45_RS21265 IPR017689 Outer membrane protein assembly factor BamD RY45_RS21270 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY45_RS21270 IPR016156 FAD/NAD-linked reductase, dimerisation domain RY45_RS21270 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS21275 IPR001991 Sodium:dicarboxylate symporter RY45_RS21280 IPR005130 Serine dehydratase-like, alpha subunit RY45_RS21280 IPR021144 Uncharacterised protein family UPF0597 RY45_RS21285 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS21290 IPR012136 NADP transhydrogenase, beta subunit RY45_RS21290 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS21295 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RY45_RS21295 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RY45_RS21295 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RY45_RS21295 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RY45_RS21295 IPR016040 NAD(P)-binding domain RY45_RS21295 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS21295 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RY45_RS21295 IPR026255 NAD(P) transhydrogenase, alpha subunit RY45_RS21300 IPR001670 Alcohol dehydrogenase, iron-type RY45_RS21300 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RY45_RS21305 IPR009057 Homeodomain-like RY45_RS21305 IPR009594 Transcription regulator HTH, AraC, N-terminal RY45_RS21305 IPR018060 DNA binding HTH domain, AraC-type RY45_RS21310 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RY45_RS21310 IPR002446 Lipocalin, bacterial RY45_RS21310 IPR011038 Calycin-like RY45_RS21310 IPR012674 Calycin RY45_RS21310 IPR022271 Lipocalin, ApoD type RY45_RS21310 IPR022272 Lipocalin family conserved site RY45_RS21315 IPR003660 HAMP linker domain RY45_RS21315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS21315 IPR029151 Periplasmic sensor domain-like RY45_RS21315 IPR033479 RY45_RS21315 RY45_RS21320 IPR003817 Phosphatidylserine decarboxylase-related RY45_RS21320 IPR022237 Phophatidylserine decarboxylase RY45_RS21320 IPR033177 RY45_RS21320 RY45_RS21335 IPR002082 Aspartate carbamoyltransferase RY45_RS21335 IPR006130 Aspartate/ornithine carbamoyltransferase RY45_RS21335 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RY45_RS21335 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RY45_RS21340 IPR002801 Aspartate transcarbamylase regulatory subunit RY45_RS21340 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal RY45_RS21340 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal RY45_RS21345 IPR001669 Arginine repressor RY45_RS21345 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21345 IPR020899 Arginine repressor, C-terminal RY45_RS21345 IPR020900 Arginine repressor, DNA-binding domain RY45_RS21345 IPR024946 Arginine repressor C-terminal-like domain RY45_RS21350 IPR018385 C4-dicarboxylate anaerobic carrier-like RY45_RS21355 IPR002292 Ornithine/putrescine carbamoyltransferase RY45_RS21355 IPR006130 Aspartate/ornithine carbamoyltransferase RY45_RS21355 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RY45_RS21355 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RY45_RS21355 IPR024904 Ornithine carbamoyltransferase RY45_RS21360 IPR001048 Aspartate/glutamate/uridylate kinase RY45_RS21360 IPR003964 Carbamate kinase RY45_RS21365 IPR003876 Arginine deiminase RY45_RS21365 IPR033199 RY45_RS21365 RY45_RS21370 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RY45_RS21370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21380 IPR003660 HAMP linker domain RY45_RS21380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS21385 IPR001851 ABC transporter, permease RY45_RS21385 IPR030158 RY45_RS21385 RY45_RS21390 IPR003439 ABC transporter-like RY45_RS21390 IPR003593 AAA+ ATPase domain RY45_RS21390 IPR017871 ABC transporter, conserved site RY45_RS21390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21395 IPR025997 Periplasmic binding protein domain RY45_RS21395 IPR028082 Periplasmic binding protein-like I RY45_RS21400 IPR004199 Beta galactosidase small chain/ domain 5 RY45_RS21400 IPR006101 Glycoside hydrolase, family 2 RY45_RS21400 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RY45_RS21400 IPR006103 Glycoside hydrolase, family 2, TIM barrel RY45_RS21400 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RY45_RS21400 IPR008979 Galactose-binding domain-like RY45_RS21400 IPR011013 Galactose mutarotase-like domain RY45_RS21400 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS21400 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain RY45_RS21400 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup RY45_RS21400 IPR017853 Glycoside hydrolase, superfamily RY45_RS21400 IPR023230 Glycoside hydrolase, family 2, conserved site RY45_RS21400 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase RY45_RS21400 IPR032312 RY45_RS21400 RY45_RS21405 IPR000843 Transcription regulator HTH, LacI RY45_RS21405 IPR010982 Lambda repressor-like, DNA-binding domain RY45_RS21405 IPR028082 Periplasmic binding protein-like I RY45_RS21410 IPR005886 UDP-glucose 4-epimerase GalE RY45_RS21410 IPR008089 Nucleotide sugar epimerase RY45_RS21410 IPR016040 NAD(P)-binding domain RY45_RS21415 IPR001937 Galactose-1-phosphate uridyl transferase, class I RY45_RS21415 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal RY45_RS21415 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal RY45_RS21415 IPR011146 HIT-like domain RY45_RS21415 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site RY45_RS21420 IPR000705 Galactokinase RY45_RS21420 IPR006203 GHMP kinase, ATP-binding, conserved site RY45_RS21420 IPR006204 GHMP kinase N-terminal domain RY45_RS21420 IPR006206 Mevalonate/galactokinase RY45_RS21420 IPR013750 GHMP kinase, C-terminal domain RY45_RS21420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS21420 IPR019539 Galactokinase galactose-binding domain RY45_RS21420 IPR019741 Galactokinase, conserved site RY45_RS21420 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS21420 IPR022963 Galactokinase, bacterial RY45_RS21425 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RY45_RS21425 IPR011013 Galactose mutarotase-like domain RY45_RS21425 IPR013458 Aldose 1-epimerase, bacterial RY45_RS21425 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup RY45_RS21425 IPR015443 Aldose 1-epimerase RY45_RS21430 IPR001395 Aldo/keto reductase RY45_RS21430 IPR023210 NADP-dependent oxidoreductase domain RY45_RS21435 IPR003824 Undecaprenyl-diphosphatase UppP RY45_RS21440 IPR011051 RmlC-like cupin domain RY45_RS21440 IPR012807 Anti-sigma factor ChrR, putative RY45_RS21440 IPR014710 RmlC-like jelly roll fold RY45_RS21440 IPR025979 ChrR-like cupin domain RY45_RS21445 IPR007627 RNA polymerase sigma-70 region 2 RY45_RS21445 IPR007630 RNA polymerase sigma-70 region 4 RY45_RS21445 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21445 IPR013324 RNA polymerase sigma factor, region 3/4 RY45_RS21445 IPR013325 RNA polymerase sigma factor, region 2 RY45_RS21445 IPR014284 RNA polymerase sigma-70 like domain RY45_RS21450 IPR003111 Peptidase S16, lon N-terminal RY45_RS21450 IPR015947 PUA-like domain RY45_RS21455 IPR001278 Arginine-tRNA ligase RY45_RS21455 IPR005148 Arginyl tRNA synthetase N-terminal domain RY45_RS21455 IPR008909 DALR anticodon binding RY45_RS21455 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RY45_RS21455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RY45_RS21460 IPR007730 Sporulation-related domain RY45_RS21465 IPR001353 Proteasome, subunit alpha/beta RY45_RS21465 IPR022281 ATP-dependent protease, HslV subunit RY45_RS21465 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS21470 IPR003593 AAA+ ATPase domain RY45_RS21470 IPR003959 ATPase, AAA-type, core RY45_RS21470 IPR004491 Heat shock protein HslU RY45_RS21470 IPR019489 Clp ATPase, C-terminal RY45_RS21470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21475 IPR011701 Major facilitator superfamily RY45_RS21475 IPR020846 Major facilitator superfamily domain RY45_RS21480 IPR000847 Transcription regulator HTH, LysR RY45_RS21480 IPR005119 LysR, substrate-binding RY45_RS21480 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21485 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RY45_RS21485 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RY45_RS21485 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RY45_RS21485 IPR007419 BFD-like [2Fe-2S]-binding domain RY45_RS21485 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RY45_RS21485 IPR017121 Nitrite reductase [NAD(P)H], large subunit RY45_RS21485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS21490 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD RY45_RS21490 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RY45_RS21495 IPR000292 Formate/nitrite transporter RY45_RS21495 IPR023271 Aquaporin-like RY45_RS21495 IPR024002 Formate/nitrite transporter, conserved site RY45_RS21500 IPR000878 Tetrapyrrole methylase RY45_RS21500 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RY45_RS21500 IPR006367 Sirohaem synthase, N-terminal RY45_RS21500 IPR012409 Sirohaem synthase RY45_RS21500 IPR014776 Tetrapyrrole methylase, subdomain 2 RY45_RS21500 IPR014777 Tetrapyrrole methylase, subdomain 1 RY45_RS21500 IPR016040 NAD(P)-binding domain RY45_RS21500 IPR019478 Sirohaem synthase, dimerisation domain RY45_RS21500 IPR028281 Siroheme synthase, central domain RY45_RS21505 IPR000644 CBS domain RY45_RS21505 IPR006667 SLC41 divalent cation transporters, integral membrane domain RY45_RS21505 IPR006668 Magnesium transporter, MgtE intracellular domain RY45_RS21505 IPR006669 Magnesium transporter MgtE RY45_RS21510 IPR003660 HAMP linker domain RY45_RS21510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RY45_RS21510 IPR032255 RY45_RS21510 RY45_RS21515 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RY45_RS21515 IPR010203 Regulator of ribonuclease activity A RY45_RS21515 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria RY45_RS21520 IPR003744 Protein of unknown function DUF165 RY45_RS21525 IPR022080 Protein of unknown function DUF3630 RY45_RS21530 IPR003846 Uncharacterised protein family UPF0061 RY45_RS21535 IPR009056 Cytochrome c-like domain RY45_RS21540 IPR001650 Helicase, C-terminal RY45_RS21540 IPR002121 HRDC domain RY45_RS21540 IPR010997 HRDC-like RY45_RS21540 IPR011545 DEAD/DEAH box helicase domain RY45_RS21540 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21540 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS21540 IPR018982 RQC domain RY45_RS21540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21540 IPR032284 RY45_RS21540 RY45_RS21545 IPR003736 Phenylacetic acid degradation-related domain RY45_RS21545 IPR006683 Thioesterase superfamily RY45_RS21545 IPR029069 HotDog domain RY45_RS21560 IPR005163 3-alpha domain RY45_RS21560 IPR005302 Molybdenum cofactor sulfurase, C-terminal RY45_RS21560 IPR011037 Pyruvate kinase-like, insert domain RY45_RS21560 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RY45_RS21565 IPR000515 MetI-like domain RY45_RS21570 IPR000515 MetI-like domain RY45_RS21575 IPR003439 ABC transporter-like RY45_RS21575 IPR003593 AAA+ ATPase domain RY45_RS21575 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RY45_RS21575 IPR008995 Molybdate/tungstate binding, C-terminal RY45_RS21575 IPR013611 Transport-associated OB, type 2 RY45_RS21575 IPR017871 ABC transporter, conserved site RY45_RS21575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21580 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RY45_RS21585 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RY45_RS21590 IPR005814 Aminotransferase class-III RY45_RS21590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS21590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS21590 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS21595 IPR008146 Glutamine synthetase, catalytic domain RY45_RS21595 IPR008147 Glutamine synthetase, beta-Grasp RY45_RS21595 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RY45_RS21595 IPR027303 Glutamine synthetase, glycine-rich site RY45_RS21600 IPR000962 Zinc finger, DksA/TraR C4-type RY45_RS21600 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RY45_RS21610 IPR009305 Protein of unknown function DUF962 RY45_RS21615 IPR010292 Uncharacterised protein family CreA RY45_RS21620 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY45_RS21620 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RY45_RS21620 IPR016040 NAD(P)-binding domain RY45_RS21620 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RY45_RS21625 IPR013126 Heat shock protein 70 family RY45_RS21625 IPR018181 Heat shock protein 70, conserved site RY45_RS21630 IPR005184 Domain of unknown function DUF306, Meta/HslJ RY45_RS21635 IPR013976 Metal-dependent hydrolase HDOD RY45_RS21640 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RY45_RS21640 IPR013780 Glycosyl hydrolase, family 13, all-beta RY45_RS21640 IPR013781 Glycoside hydrolase, catalytic domain RY45_RS21640 IPR013783 Immunoglobulin-like fold RY45_RS21640 IPR014756 Immunoglobulin E-set RY45_RS21640 IPR015902 Glycoside hydrolase, family 13 RY45_RS21640 IPR017069 Maltodextrin glucosidase RY45_RS21640 IPR017853 Glycoside hydrolase, superfamily RY45_RS21640 IPR032091 RY45_RS21640 RY45_RS21645 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RY45_RS21645 IPR016040 NAD(P)-binding domain RY45_RS21645 IPR020025 Pseudaminic acid biosynthesis, PseB RY45_RS21650 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RY45_RS21650 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS21650 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS21650 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS21650 IPR020026 Pseudaminic acid biosynthesis, PseC RY45_RS21655 IPR025877 MobA-like NTP transferase domain RY45_RS21655 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS21660 IPR017926 Glutamine amidotransferase RY45_RS21660 IPR029062 Class I glutamine amidotransferase-like RY45_RS21665 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RY45_RS21665 IPR008279 PEP-utilising enzyme, mobile domain RY45_RS21665 IPR013815 ATP-grasp fold, subdomain 1 RY45_RS21665 IPR013816 ATP-grasp fold, subdomain 2 RY45_RS21670 IPR013216 Methyltransferase type 11 RY45_RS21670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS21685 IPR004379 UDP-galactopyranose mutase RY45_RS21685 IPR015899 UDP-galactopyranose mutase, C-terminal RY45_RS21685 IPR016040 NAD(P)-binding domain RY45_RS21690 IPR001173 Glycosyltransferase 2-like RY45_RS21690 IPR013022 Xylose isomerase-like, TIM barrel domain RY45_RS21690 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS21695 IPR008670 Acyl-CoA reductase, LuxC RY45_RS21695 IPR016161 Aldehyde/histidinol dehydrogenase RY45_RS21695 IPR016162 Aldehyde dehydrogenase, N-terminal RY45_RS21700 IPR007534 Acyl-protein synthetase, LuxE RY45_RS21705 IPR000873 AMP-dependent synthetase/ligase RY45_RS21705 IPR020845 AMP-binding, conserved site RY45_RS21710 IPR002347 Glucose/ribitol dehydrogenase RY45_RS21710 IPR016040 NAD(P)-binding domain RY45_RS21710 IPR020904 Short-chain dehydrogenase/reductase, conserved site RY45_RS21715 IPR009081 Acyl carrier protein-like RY45_RS21720 IPR000182 GNAT domain RY45_RS21720 IPR016181 Acyl-CoA N-acyltransferase RY45_RS21725 IPR003329 Acylneuraminate cytidylyltransferase RY45_RS21725 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS21730 IPR007235 Glycosyl transferase, family 28, C-terminal RY45_RS21730 IPR020023 Pseudaminic acid biosynthesis-associated protein PseG RY45_RS21735 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal RY45_RS21735 IPR013132 N-acetylneuraminic acid synthase, N-terminal RY45_RS21735 IPR013785 Aldolase-type TIM barrel RY45_RS21735 IPR013974 SAF domain RY45_RS21735 IPR020030 Pseudaminic acid biosynthesis, PseI RY45_RS21740 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like RY45_RS21750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS21755 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like RY45_RS21755 IPR032589 RY45_RS21755 RY45_RS21755 IPR032610 RY45_RS21755 RY45_RS21755 IPR032622 RY45_RS21755 RY45_RS21760 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RY45_RS21765 IPR003679 Aminoglycoside 3-N-acetyltransferase RY45_RS21770 IPR009081 Acyl carrier protein-like RY45_RS21775 IPR016181 Acyl-CoA N-acyltransferase RY45_RS21775 IPR023214 HAD-like domain RY45_RS21780 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RY45_RS21780 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RY45_RS21790 IPR010280 (Uracil-5)-methyltransferase family RY45_RS21790 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA RY45_RS21790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS21790 IPR030390 RY45_RS21790 RY45_RS21790 IPR030391 RY45_RS21790 RY45_RS21795 IPR001789 Signal transduction response regulator, receiver domain RY45_RS21795 IPR001867 Signal transduction response regulator, C-terminal RY45_RS21795 IPR011006 CheY-like superfamily RY45_RS21795 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21795 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS21800 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS21800 IPR003660 HAMP linker domain RY45_RS21800 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS21800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS21810 IPR001891 Malic oxidoreductase RY45_RS21810 IPR012301 Malic enzyme, N-terminal domain RY45_RS21810 IPR012302 Malic enzyme, NAD-binding RY45_RS21810 IPR015884 Malic enzyme, conserved site RY45_RS21810 IPR016040 NAD(P)-binding domain RY45_RS21815 IPR016040 NAD(P)-binding domain RY45_RS21815 IPR021295 Protein of unknown function DUF2867 RY45_RS21820 IPR002150 Ribosomal protein L31 RY45_RS21820 IPR027491 Ribosomal protein L31 type A RY45_RS21825 IPR001650 Helicase, C-terminal RY45_RS21825 IPR005259 Primosomal protein n RY45_RS21825 IPR011545 DEAD/DEAH box helicase domain RY45_RS21825 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RY45_RS21825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21835 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS21835 IPR009057 Homeodomain-like RY45_RS21835 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RY45_RS21835 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS21840 IPR007065 HPP RY45_RS21845 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain RY45_RS21845 IPR002368 Outer membrane protein, OmpA RY45_RS21845 IPR006664 Outer membrane protein, bacterial RY45_RS21845 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RY45_RS21845 IPR006690 Outer membrane protein, OmpA-like, conserved site RY45_RS21845 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RY45_RS21850 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RY45_RS21850 IPR001721 ACT-like domain RY45_RS21850 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RY45_RS21850 IPR005787 Threonine dehydratase, biosynthetic RY45_RS21855 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RY45_RS21855 IPR004404 Dihydroxy-acid dehydratase RY45_RS21855 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RY45_RS21855 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RY45_RS21860 IPR001544 Aminotransferase, class IV RY45_RS21860 IPR018300 Aminotransferase, class IV, conserved site RY45_RS21870 IPR000399 TPP-binding enzyme, conserved site RY45_RS21870 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RY45_RS21870 IPR012000 Thiamine pyrophosphate enzyme, central domain RY45_RS21870 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RY45_RS21870 IPR029035 DHS-like NAD/FAD-binding domain RY45_RS21870 IPR029061 Thiamin diphosphate-binding fold RY45_RS21875 IPR000523 Magnesium chelatase, ChlI subunit RY45_RS21875 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase RY45_RS21875 IPR003593 AAA+ ATPase domain RY45_RS21875 IPR004482 Mg chelatase-related protein RY45_RS21875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS21875 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS21875 IPR025158 Mg chelatase-related protein, C-terminal domain RY45_RS21875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21880 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS21885 IPR002123 Phospholipid/glycerol acyltransferase RY45_RS21890 IPR007553 Domain of unknown function DUF523 RY45_RS21895 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS21895 IPR015797 NUDIX hydrolase domain-like RY45_RS21900 IPR000868 Isochorismatase-like RY45_RS21905 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RY45_RS21905 IPR006406 Nicotinate phosphoribosyltransferase RY45_RS21905 IPR007229 Nicotinate phosphoribosyltransferase family RY45_RS21910 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS21910 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein RY45_RS21910 IPR030836 RY45_RS21910 RY45_RS21915 IPR003439 ABC transporter-like RY45_RS21915 IPR003593 AAA+ ATPase domain RY45_RS21915 IPR017871 ABC transporter, conserved site RY45_RS21915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS21920 IPR000515 MetI-like domain RY45_RS21925 IPR001853 DSBA-like thioredoxin domain RY45_RS21925 IPR012336 Thioredoxin-like fold RY45_RS21925 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RY45_RS21930 IPR002575 Aminoglycoside phosphotransferase RY45_RS21930 IPR011009 Protein kinase-like domain RY45_RS21930 IPR032882 RY45_RS21930 RY45_RS21935 IPR013783 Immunoglobulin-like fold RY45_RS21935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RY45_RS21935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RY45_RS21935 IPR032879 RY45_RS21935 RY45_RS21940 IPR009383 Protein of unknown function DUF1040 RY45_RS21945 IPR000160 GGDEF domain RY45_RS21945 IPR029787 Nucleotide cyclase RY45_RS21950 IPR000551 MerR-type HTH domain RY45_RS21950 IPR009061 DNA binding domain, putative RY45_RS21950 IPR011789 Cu(I)-responsive transcriptional regulator RY45_RS21950 IPR015358 Transcription regulator MerR, DNA binding RY45_RS21955 IPR001757 Cation-transporting P-type ATPase RY45_RS21955 IPR006121 Heavy metal-associated domain, HMA RY45_RS21955 IPR008250 P-type ATPase, A domain RY45_RS21955 IPR017969 Heavy-metal-associated, conserved site RY45_RS21955 IPR018303 P-type ATPase, phosphorylation site RY45_RS21955 IPR023214 HAD-like domain RY45_RS21955 IPR023299 P-type ATPase, cytoplasmic domain N RY45_RS21955 IPR027256 Cation-transporting P-type ATPase, subfamily IB RY45_RS21960 IPR000836 Phosphoribosyltransferase domain RY45_RS21960 IPR004467 Orotate phosphoribosyl transferase domain RY45_RS21960 IPR023031 Orotate phosphoribosyltransferase RY45_RS21960 IPR029057 Phosphoribosyltransferase-like RY45_RS21965 IPR001247 Exoribonuclease, phosphorolytic domain 1 RY45_RS21965 IPR002381 Ribonuclease phosphorolytic, bacterial-type RY45_RS21965 IPR015847 Exoribonuclease, phosphorolytic domain 2 RY45_RS21965 IPR018336 Ribonuclease PH, conserved site RY45_RS21965 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS21965 IPR027408 PNPase/RNase PH domain RY45_RS21970 IPR005229 Conserved hypothetical protein CHP00255 RY45_RS21970 IPR013527 YicC-like, N-terminal RY45_RS21970 IPR013551 Domain of unknown function DUF1732 RY45_RS21975 IPR002201 Glycosyl transferase, family 9 RY45_RS21980 IPR002201 Glycosyl transferase, family 9 RY45_RS21990 IPR002654 Glycosyl transferase, family 25 RY45_RS21995 IPR007016 O-antigen ligase-related RY45_RS22000 IPR002509 Polysaccharide deacetylase RY45_RS22000 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RY45_RS22000 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RY45_RS22005 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RY45_RS22005 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase RY45_RS22005 IPR016040 NAD(P)-binding domain RY45_RS22010 IPR001647 DNA-binding HTH domain, TetR-type RY45_RS22010 IPR009057 Homeodomain-like RY45_RS22010 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RY45_RS22010 IPR025722 Bacterial transcriptional repressor TetR RY45_RS22015 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RY45_RS22015 IPR004839 Aminotransferase, class I/classII RY45_RS22015 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase RY45_RS22015 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS22015 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS22015 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS22020 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RY45_RS22020 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RY45_RS22020 IPR004627 L-threonine 3-dehydrogenase RY45_RS22020 IPR011032 GroES (chaperonin 10)-like RY45_RS22020 IPR013149 Alcohol dehydrogenase, C-terminal RY45_RS22020 IPR013154 Alcohol dehydrogenase GroES-like RY45_RS22020 IPR016040 NAD(P)-binding domain RY45_RS22020 IPR020843 Polyketide synthase, enoylreductase RY45_RS22025 IPR002323 Cytochrome c, class IE RY45_RS22025 IPR009056 Cytochrome c-like domain RY45_RS22030 IPR000160 GGDEF domain RY45_RS22030 IPR001633 EAL domain RY45_RS22030 IPR029787 Nucleotide cyclase RY45_RS22035 IPR000212 DNA helicase, UvrD/REP type RY45_RS22035 IPR005752 DNA helicase, ATP-dependent, RepA type RY45_RS22035 IPR013986 DExx box DNA helicase domain RY45_RS22035 IPR014016 UvrD-like Helicase, ATP-binding domain RY45_RS22035 IPR014017 DNA helicase, UvrD-like, C-terminal RY45_RS22035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22040 IPR000192 Aminotransferase class V domain RY45_RS22040 IPR010970 Cysteine desulfurase, SufS RY45_RS22040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RY45_RS22040 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RY45_RS22040 IPR015424 Pyridoxal phosphate-dependent transferase RY45_RS22040 IPR016454 Cysteine desulfurase, NifS RY45_RS22040 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RY45_RS22045 IPR003808 Fe-S metabolism associated domain, SufE-like RY45_RS22050 IPR000594 UBA/THIF-type NAD/FAD binding fold RY45_RS22050 IPR016040 NAD(P)-binding domain RY45_RS22085 IPR011990 Tetratricopeptide-like helical domain RY45_RS22090 IPR003538 Gram-negative bacterial TonB protein RY45_RS22090 IPR006260 TonB, C-terminal RY45_RS22095 IPR003400 Biopolymer transport protein ExbD/TolR RY45_RS22100 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS22105 IPR002898 MotA/TolQ/ExbB proton channel RY45_RS22105 IPR017270 Outer membrane stability protein, TolR RY45_RS22110 IPR016866 Uncharacterised conserved protein UCP028069 RY45_RS22115 IPR000792 Transcription regulator LuxR, C-terminal RY45_RS22115 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RY45_RS22115 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS22115 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS22120 IPR001347 Sugar isomerase (SIS) RY45_RS22120 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RY45_RS22120 IPR029055 Nucleophile aminohydrolases, N-terminal RY45_RS22125 IPR001034 HTH DeoR N-terminal domain RY45_RS22125 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS22125 IPR014036 DeoR C-terminal sensor domain RY45_RS22125 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RY45_RS22130 IPR001789 Signal transduction response regulator, receiver domain RY45_RS22130 IPR001867 Signal transduction response regulator, C-terminal RY45_RS22130 IPR011006 CheY-like superfamily RY45_RS22130 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS22130 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS22135 IPR003594 Histidine kinase-like ATPase, C-terminal domain RY45_RS22135 IPR003660 HAMP linker domain RY45_RS22135 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RY45_RS22135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RY45_RS22135 IPR029151 Periplasmic sensor domain-like RY45_RS22140 IPR001460 Penicillin-binding protein, transpeptidase RY45_RS22140 IPR002137 Beta-lactamase, class-D active site RY45_RS22140 IPR012338 Beta-lactamase/transpeptidase-like RY45_RS22145 IPR010364 Uncharacterised protein family, inner membrane CreD RY45_RS22150 IPR001451 Bacterial transferase hexapeptide repeat RY45_RS22150 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RY45_RS22150 IPR011004 Trimeric LpxA-like RY45_RS22150 IPR018357 Hexapeptide transferase, conserved site RY45_RS22150 IPR025877 MobA-like NTP transferase domain RY45_RS22150 IPR029044 Nucleotide-diphospho-sugar transferases RY45_RS22155 IPR001469 ATPase, F1 complex, delta/epsilon subunit RY45_RS22155 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RY45_RS22155 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain RY45_RS22160 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS22160 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RY45_RS22160 IPR003593 AAA+ ATPase domain RY45_RS22160 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RY45_RS22160 IPR005722 ATPase, F1 complex, beta subunit RY45_RS22160 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RY45_RS22160 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RY45_RS22160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22165 IPR000131 ATPase, F1 complex, gamma subunit RY45_RS22165 IPR023632 ATPase, F1 complex, gamma subunit conserved site RY45_RS22165 IPR023633 ATPase, F1 complex, gamma subunit domain RY45_RS22170 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RY45_RS22170 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RY45_RS22170 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RY45_RS22170 IPR005294 ATPase, F1 complex, alpha subunit RY45_RS22170 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RY45_RS22170 IPR023366 ATP synthase subunit alpha-like domain RY45_RS22170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22175 IPR000711 ATPase, OSCP/delta subunit RY45_RS22175 IPR020781 ATPase, OSCP/delta subunit, conserved site RY45_RS22175 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RY45_RS22180 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RY45_RS22180 IPR005864 ATPase, F0 complex, subunit B, bacterial RY45_RS22180 IPR028987 F-type ATP synthase subunit B-like, membrane domain RY45_RS22185 IPR000454 ATPase, F0 complex, subunit C RY45_RS22185 IPR002379 V-ATPase proteolipid subunit C-like domain RY45_RS22185 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast RY45_RS22185 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RY45_RS22190 IPR000568 ATPase, F0 complex, subunit A RY45_RS22190 IPR023011 ATPase, F0 complex, subunit A, active site RY45_RS22195 IPR005598 ATP synthase protein I RY45_RS22200 IPR003115 ParB/Sulfiredoxin RY45_RS22200 IPR004437 ParB/RepB/Spo0J partition protein family RY45_RS22205 IPR025669 AAA domain RY45_RS22205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22210 IPR003682 rRNA small subunit methyltransferase G RY45_RS22210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RY45_RS22215 IPR002218 Glucose-inhibited division protein A-related RY45_RS22215 IPR004416 Glucose-inhibited division protein A RY45_RS22215 IPR020595 Glucose-inhibited division protein A-related, conserved site RY45_RS22215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RY45_RS22215 IPR026904 GidA associated domain 3 RY45_RS22220 IPR001094 Flavodoxin RY45_RS22220 IPR008254 Flavodoxin/nitric oxide synthase RY45_RS22220 IPR029039 Flavoprotein-like RY45_RS22225 IPR000531 TonB-dependent receptor, beta-barrel RY45_RS22225 IPR010105 TonB-dependent siderophore receptor RY45_RS22225 IPR010916 TonB box, conserved site RY45_RS22225 IPR012910 TonB-dependent receptor, plug RY45_RS22230 IPR003439 ABC transporter-like RY45_RS22230 IPR003593 AAA+ ATPase domain RY45_RS22230 IPR005898 Cyclic peptide transporter RY45_RS22230 IPR011527 ABC transporter type 1, transmembrane domain RY45_RS22230 IPR017871 ABC transporter, conserved site RY45_RS22230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22235 IPR003439 ABC transporter-like RY45_RS22235 IPR003593 AAA+ ATPase domain RY45_RS22235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22240 IPR002491 ABC transporter periplasmic binding domain RY45_RS22240 IPR008091 Ferrichrome-binding periplasmic protein RY45_RS22245 IPR000522 ABC transporter, permease protein RY45_RS22245 IPR029022 ABC transporter, BtuC-like RY45_RS22250 IPR004520 tRNA modification GTPase MnmE RY45_RS22250 IPR005225 Small GTP-binding protein domain RY45_RS22250 IPR006073 GTP binding domain RY45_RS22250 IPR018948 GTP-binding protein TrmE, N-terminal RY45_RS22250 IPR025867 tRNA modification GTPase MnmE C-terminal domain RY45_RS22250 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RY45_RS22250 IPR027368 tRNA modification GTPase MnmE domain 2 RY45_RS22250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22255 IPR001708 Membrane insertase OXA1/ALB3/YidC RY45_RS22255 IPR019998 Membrane insertase YidC RY45_RS22255 IPR028053 Membrane insertase YidC, N-terminal RY45_RS22255 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RY45_RS22260 IPR000100 Ribonuclease P RY45_RS22260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS22260 IPR020539 Ribonuclease P, conserved site RY45_RS22260 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS22265 IPR000271 Ribosomal protein L34 RY45_RS22265 IPR020939 Ribosomal protein L34, conserved site RY45_RS22270 IPR003439 ABC transporter-like RY45_RS22270 IPR003593 AAA+ ATPase domain RY45_RS22270 IPR017871 ABC transporter, conserved site RY45_RS22270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22270 IPR030679 RY45_RS22270 RY45_RS22275 IPR000515 MetI-like domain RY45_RS22275 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RY45_RS22280 IPR001638 Extracellular solute-binding protein, family 3 RY45_RS22305 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RY45_RS22305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RY45_RS22350 IPR000565 DNA topoisomerase, type IIA, subunit B RY45_RS22350 IPR001241 DNA topoisomerase, type IIA RY45_RS22350 IPR006171 Toprim domain RY45_RS22350 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RY45_RS22350 IPR013759 DNA topoisomerase, type IIA, central domain RY45_RS22350 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS22350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RY45_RS22350 IPR018522 DNA topoisomerase, type IIA, conserved site RY45_RS22350 IPR020568 Ribosomal protein S5 domain 2-type fold RY45_RS22355 IPR001241 DNA topoisomerase, type IIA RY45_RS22355 IPR006171 Toprim domain RY45_RS22355 IPR013759 DNA topoisomerase, type IIA, central domain RY45_RS22355 IPR013760 DNA topoisomerase, type IIA-like domain RY45_RS22400 IPR015927 Peptidase S24/S26A/S26B/S26C RY45_RS22400 IPR019759 Peptidase S24/S26A/S26B RY45_RS22400 IPR028360 Peptidase S24/S26, beta-ribbon domain RY45_RS22410 IPR006946 Protein of unknown function DUF642 RY45_RS22410 IPR008979 Galactose-binding domain-like RY45_RS22415 IPR000182 GNAT domain RY45_RS22415 IPR016181 Acyl-CoA N-acyltransferase RY45_RS22430 IPR006915 Domain of unknown function DUF637, haemagglutinin putative RY45_RS22445 IPR010183 Bacteriophage lambda, Bet RY45_RS22445 IPR018330 RecT family RY45_RS22450 IPR014054 Bacteriophage regulatory protein, Rha family RY45_RS22470 IPR001867 Signal transduction response regulator, C-terminal RY45_RS22470 IPR011991 Winged helix-turn-helix DNA-binding domain RY45_RS22470 IPR016032 Signal transduction response regulator, C-terminal effector RY45_RS22475 IPR009492 TniQ RY45_RS22480 IPR006522 Phage virion morphogensis protein