V428_RS00005 SM00382 ATPases associated with a variety of cellular activities V428_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain V428_RS00010 SM00480 DNA polymerase III beta subunit V428_RS00020 SM00387 Histidine kinase-like ATPases V428_RS00020 SM00433 TopoisomeraseII V428_RS00055 SM00342 helix_turn_helix, arabinose operon control protein V428_RS00065 SM00448 cheY-homologous receiver domain V428_RS00065 SM00862 Transcriptional regulatory protein, C terminal V428_RS00070 SM00387 Histidine kinase-like ATPases V428_RS00070 SM00388 His Kinase A (phosphoacceptor) domain V428_RS00095 SM00091 PAS domain V428_RS00095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS00095 SM00387 Histidine kinase-like ATPases V428_RS00135 SM00458 Ricin-type beta-trefoil V428_RS00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS00155 SM00387 Histidine kinase-like ATPases V428_RS00155 SM00388 His Kinase A (phosphoacceptor) domain V428_RS00160 SM00448 cheY-homologous receiver domain V428_RS00190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS00190 SM00954 Region found in RelA / SpoT proteins V428_RS00195 SM01409 V428_RS00195 V428_RS00200 SM00072 Guanylate kinase homologues. V428_RS00215 SM00267 diguanylate cyclase V428_RS00255 SM00267 diguanylate cyclase V428_RS00295 SM00487 DEAD-like helicases superfamily V428_RS00365 SM00421 helix_turn_helix, Lux Regulon V428_RS00365 SM00448 cheY-homologous receiver domain V428_RS00370 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS00370 SM00387 Histidine kinase-like ATPases V428_RS00370 SM00388 His Kinase A (phosphoacceptor) domain V428_RS00370 SM00448 cheY-homologous receiver domain V428_RS00380 SM00387 Histidine kinase-like ATPases V428_RS00385 SM00448 cheY-homologous receiver domain V428_RS00385 SM00850 LytTr DNA-binding domain V428_RS00400 SM01001 AIR carboxylase V428_RS00430 SM00360 RNA recognition motif V428_RS00510 SM01004 Delta-aminolevulinic acid dehydratase V428_RS00520 SM00052 Putative diguanylate phosphodiesterase V428_RS00520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS00520 SM00091 PAS domain V428_RS00520 SM00267 diguanylate cyclase V428_RS00545 SM00487 DEAD-like helicases superfamily V428_RS00545 SM00490 helicase superfamily c-terminal domain V428_RS00555 SM00357 Cold shock protein domain V428_RS00555 SM00382 ATPases associated with a variety of cellular activities V428_RS00555 SM00959 Rho termination factor, N-terminal domain V428_RS00590 SM00450 Rhodanese Homology Domain V428_RS00600 SM00342 helix_turn_helix, arabinose operon control protein V428_RS00605 SM00382 ATPases associated with a variety of cellular activities V428_RS00610 SM00382 ATPases associated with a variety of cellular activities V428_RS00630 SM00354 helix_turn _helix lactose operon repressor V428_RS00645 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS00645 SM00866 V428_RS00645 V428_RS00650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS00650 SM00382 ATPases associated with a variety of cellular activities V428_RS00655 SM00849 Metallo-beta-lactamase superfamily V428_RS00710 SM00836 DALR anticodon binding domain V428_RS00755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS00755 SM00387 Histidine kinase-like ATPases V428_RS00755 SM00388 His Kinase A (phosphoacceptor) domain V428_RS00760 SM00448 cheY-homologous receiver domain V428_RS00760 SM00862 Transcriptional regulatory protein, C terminal V428_RS00820 SM00881 CoA binding domain V428_RS00895 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain V428_RS00895 SM01232 V428_RS00895 V428_RS00945 SM00354 helix_turn _helix lactose operon repressor V428_RS00950 SM00829 Enoylreductase V428_RS00975 SM00563 Phosphate acyltransferases V428_RS01005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS01005 SM00387 Histidine kinase-like ATPases V428_RS01005 SM00388 His Kinase A (phosphoacceptor) domain V428_RS01010 SM00448 cheY-homologous receiver domain V428_RS01010 SM00862 Transcriptional regulatory protein, C terminal V428_RS01020 SM00971 Serine acetyltransferase, N-terminal V428_RS01040 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V428_RS01040 SM00474 3'-5' exonuclease V428_RS01040 SM00475 5'-3' exonuclease V428_RS01040 SM00482 DNA polymerase A domain V428_RS01085 SM00354 helix_turn _helix lactose operon repressor V428_RS01090 SM01038 Beta galactosidase small chain V428_RS01135 SM00829 Enoylreductase V428_RS01155 SM00382 ATPases associated with a variety of cellular activities V428_RS01170 SM01321 V428_RS01170 V428_RS01230 SM00831 Cation transporter/ATPase, N-terminus V428_RS01240 SM00342 helix_turn_helix, arabinose operon control protein V428_RS01255 SM00530 Helix-turn-helix XRE-family like proteins V428_RS01275 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V428_RS01275 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V428_RS01330 SM00257 Lysin motif V428_RS01350 SM01001 AIR carboxylase V428_RS01400 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS01410 SM00382 ATPases associated with a variety of cellular activities V428_RS01410 SM00448 cheY-homologous receiver domain V428_RS01415 SM00091 PAS domain V428_RS01415 SM00387 Histidine kinase-like ATPases V428_RS01415 SM00388 His Kinase A (phosphoacceptor) domain V428_RS01425 SM01230 V428_RS01425 V428_RS01460 SM00487 DEAD-like helicases superfamily V428_RS01460 SM00490 helicase superfamily c-terminal domain V428_RS01465 SM00155 Phospholipase D. Active site motifs. V428_RS01490 SM00354 helix_turn _helix lactose operon repressor V428_RS01510 SM00450 Rhodanese Homology Domain V428_RS01555 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS01555 SM00732 Likely ribonuclease with RNase H fold. V428_RS01565 SM00448 cheY-homologous receiver domain V428_RS01565 SM00862 Transcriptional regulatory protein, C terminal V428_RS01570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS01570 SM00387 Histidine kinase-like ATPases V428_RS01570 SM00388 His Kinase A (phosphoacceptor) domain V428_RS01580 SM01403 V428_RS01580 V428_RS01600 SM01382 V428_RS01600 V428_RS01600 SM01383 V428_RS01600 V428_RS01615 SM00322 K homology RNA-binding domain V428_RS01635 SM01374 V428_RS01635 V428_RS01695 SM00363 S4 RNA-binding domain V428_RS01695 SM01390 V428_RS01695 V428_RS01700 SM00662 RNA polymerases D V428_RS01760 SM00822 V428_RS01760 V428_RS01845 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS01850 SM00155 Phospholipase D. Active site motifs. V428_RS01880 SM00382 ATPases associated with a variety of cellular activities V428_RS01880 SM00962 SRP54-type protein, GTPase domain V428_RS01880 SM00963 SRP54-type protein, helical bundle domain V428_RS01885 SM00382 ATPases associated with a variety of cellular activities V428_RS01900 SM00947 Carbonic anhydrase V428_RS01905 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS01905 SM00866 V428_RS01905 V428_RS01935 SM00052 Putative diguanylate phosphodiesterase V428_RS01940 SM00052 Putative diguanylate phosphodiesterase V428_RS01940 SM00267 diguanylate cyclase V428_RS01970 SM00965 Secretin and TonB N terminus short domain V428_RS01985 SM00382 ATPases associated with a variety of cellular activities V428_RS02055 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS02065 SM00886 Stress responsive A/B Barrel Domain V428_RS02125 SM00448 cheY-homologous receiver domain V428_RS02125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS02130 SM00387 Histidine kinase-like ATPases V428_RS02130 SM00388 His Kinase A (phosphoacceptor) domain V428_RS02130 SM00448 cheY-homologous receiver domain V428_RS02135 SM00331 Sigma factor PP2C-like phosphatases V428_RS02135 SM00387 Histidine kinase-like ATPases V428_RS02145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS02145 SM00091 PAS domain V428_RS02150 SM00342 helix_turn_helix, arabinose operon control protein V428_RS02275 SM01018 B12 binding domain V428_RS02290 SM00388 His Kinase A (phosphoacceptor) domain V428_RS02295 SM00448 cheY-homologous receiver domain V428_RS02295 SM00862 Transcriptional regulatory protein, C terminal V428_RS02310 SM00999 Aerolysin toxin V428_RS02340 SM00876 Biotin and Thiamin Synthesis associated domain V428_RS02365 SM00267 diguanylate cyclase V428_RS02475 SM01219 V428_RS02475 V428_RS02510 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS02540 SM00382 ATPases associated with a variety of cellular activities V428_RS02555 SM00852 Probable molybdopterin binding domain V428_RS02575 SM00344 helix_turn_helix ASNC type V428_RS02595 SM00642 Alpha-amylase domain V428_RS02735 SM00862 Transcriptional regulatory protein, C terminal V428_RS02745 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain V428_RS02795 SM00487 DEAD-like helicases superfamily V428_RS02795 SM00490 helicase superfamily c-terminal domain V428_RS02875 SM00357 Cold shock protein domain V428_RS02875 SM00955 V428_RS02875 V428_RS02890 SM00421 helix_turn_helix, Lux Regulon V428_RS02925 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS02925 SM00895 V428_RS02925 V428_RS02940 SM00363 S4 RNA-binding domain V428_RS02955 SM00382 ATPases associated with a variety of cellular activities V428_RS03005 SM00421 helix_turn_helix, Lux Regulon V428_RS03040 SM00342 helix_turn_helix, arabinose operon control protein V428_RS03075 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_RS03120 SM01266 V428_RS03120 V428_RS03150 SM00382 ATPases associated with a variety of cellular activities V428_RS03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS03165 SM01049 V428_RS03165 V428_RS03195 SM00245 tail specific protease V428_RS03275 SM00487 DEAD-like helicases superfamily V428_RS03275 SM00490 helicase superfamily c-terminal domain V428_RS03295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS03360 SM00938 Nitrogen regulatory protein P-II V428_RS03375 SM00382 ATPases associated with a variety of cellular activities V428_RS03390 SM00382 ATPases associated with a variety of cellular activities V428_RS03395 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS03395 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_RS03415 SM00671 Sel1-like repeats. V428_RS03430 SM01091 Transporter associated domain V428_RS03440 SM00382 ATPases associated with a variety of cellular activities V428_RS03440 SM00962 SRP54-type protein, GTPase domain V428_RS03440 SM00963 SRP54-type protein, helical bundle domain V428_RS03470 SM00927 DNA mismatch repair enzyme MutH V428_RS03480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS03510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_RS03525 SM00904 Riboflavin kinase V428_RS03610 SM00938 Nitrogen regulatory protein P-II V428_RS03625 SM00267 diguanylate cyclase V428_RS03630 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS03630 SM00357 Cold shock protein domain V428_RS03630 SM00955 V428_RS03630 V428_RS03635 SM00967 RNA 2'-O ribose methyltransferase substrate binding V428_RS03700 SM00829 Enoylreductase V428_RS03745 SM00382 ATPases associated with a variety of cellular activities V428_RS03750 SM00327 von Willebrand factor (vWF) type A domain V428_RS03755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS03755 SM00091 PAS domain V428_RS03755 SM00267 diguanylate cyclase V428_RS03760 SM00028 Tetratricopeptide repeats V428_RS03760 SM00267 diguanylate cyclase V428_RS03775 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS03815 SM00849 Metallo-beta-lactamase superfamily V428_RS03825 SM00487 DEAD-like helicases superfamily V428_RS03825 SM00490 helicase superfamily c-terminal domain V428_RS03910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS03910 SM00387 Histidine kinase-like ATPases V428_RS03910 SM00388 His Kinase A (phosphoacceptor) domain V428_RS03915 SM00448 cheY-homologous receiver domain V428_RS03915 SM00862 Transcriptional regulatory protein, C terminal V428_RS03925 SM00382 ATPases associated with a variety of cellular activities V428_RS03930 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS03935 SM00382 ATPases associated with a variety of cellular activities V428_RS03985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS03985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS03995 SM00287 Bacterial SH3 domain homologues V428_RS04020 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_RS04120 SM00358 Double-stranded RNA binding motif V428_RS04120 SM00535 Ribonuclease III family V428_RS04185 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_RS04185 SM01134 V428_RS04185 V428_RS04190 SM00644 V428_RS04190 V428_RS04200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS04200 SM00387 Histidine kinase-like ATPases V428_RS04200 SM00388 His Kinase A (phosphoacceptor) domain V428_RS04200 SM00448 cheY-homologous receiver domain V428_RS04210 SM00954 Region found in RelA / SpoT proteins V428_RS04225 SM01192 V428_RS04225 V428_RS04225 SM01193 V428_RS04225 V428_RS04265 SM00257 Lysin motif V428_RS04285 SM00400 zinc finger V428_RS04285 SM00493 V428_RS04285 V428_RS04285 SM00766 DNA primase DnaG DnaB-binding V428_RS04305 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_RS04305 SM00632 V428_RS04305 V428_RS04305 SM00642 Alpha-amylase domain V428_RS04320 SM01209 V428_RS04320 V428_RS04320 SM01210 V428_RS04320 V428_RS04325 SM00798 AICARFT/IMPCHase bienzyme V428_RS04325 SM00851 MGS-like domain V428_RS04330 SM00422 helix_turn_helix, mercury resistance V428_RS04345 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS04420 SM00883 Chaperonin 10 Kd subunit V428_RS04435 SM00052 Putative diguanylate phosphodiesterase V428_RS04435 SM00267 diguanylate cyclase V428_RS04450 SM00487 DEAD-like helicases superfamily V428_RS04450 SM00490 helicase superfamily c-terminal domain V428_RS04490 SM00670 Large family of predicted nucleotide-binding domains V428_RS04495 SM00382 ATPases associated with a variety of cellular activities V428_RS04530 SM01329 V428_RS04530 V428_RS04535 SM00917 LeuA allosteric (dimerisation) domain V428_RS04545 SM00014 Acid phosphatase homologues V428_RS04595 SM01130 V428_RS04595 V428_RS04640 SM00073 Histidine Phosphotransfer domain V428_RS04640 SM00091 PAS domain V428_RS04640 SM00387 Histidine kinase-like ATPases V428_RS04640 SM00388 His Kinase A (phosphoacceptor) domain V428_RS04640 SM00448 cheY-homologous receiver domain V428_RS04645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS04655 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS04655 SM00073 Histidine Phosphotransfer domain V428_RS04655 SM00091 PAS domain V428_RS04655 SM00387 Histidine kinase-like ATPases V428_RS04655 SM00388 His Kinase A (phosphoacceptor) domain V428_RS04655 SM00448 cheY-homologous receiver domain V428_RS04660 SM00052 Putative diguanylate phosphodiesterase V428_RS04660 SM00448 cheY-homologous receiver domain V428_RS04665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS04665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS04670 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V428_RS04685 SM00382 ATPases associated with a variety of cellular activities V428_RS04685 SM00930 V428_RS04685 V428_RS04720 SM00257 Lysin motif V428_RS04720 SM00646 V428_RS04720 V428_RS04725 SM00853 MutL C terminal dimerisation domain V428_RS04725 SM01340 V428_RS04725 V428_RS04745 SM00244 prohibitin homologues V428_RS04750 SM00244 prohibitin homologues V428_RS04800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS04810 SM00530 Helix-turn-helix XRE-family like proteins V428_RS04825 SM00650 Ribosomal RNA adenine dimethylases V428_RS04855 SM00271 DnaJ molecular chaperone homology domain V428_RS04870 SM00382 ATPases associated with a variety of cellular activities V428_RS04995 SM00382 ATPases associated with a variety of cellular activities V428_RS05005 SM00382 ATPases associated with a variety of cellular activities V428_RS05035 SM00507 HNH nucleases V428_RS05190 SM01133 V428_RS05190 V428_RS05210 SM00382 ATPases associated with a variety of cellular activities V428_RS05260 SM00530 Helix-turn-helix XRE-family like proteins V428_RS05270 SM00387 Histidine kinase-like ATPases V428_RS05270 SM00388 His Kinase A (phosphoacceptor) domain V428_RS05270 SM00448 cheY-homologous receiver domain V428_RS05275 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_RS05275 SM00495 Chitin-binding domain type 3 V428_RS05275 SM00636 V428_RS05275 V428_RS05285 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_RS05285 SM00495 Chitin-binding domain type 3 V428_RS05295 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS05295 SM00419 helix_turn_helix, cAMP Regulatory protein V428_RS05355 SM00984 UDP binding domain V428_RS05365 SM00267 diguanylate cyclase V428_RS05375 SM00260 Two component signalling adaptor domain V428_RS05375 SM00448 cheY-homologous receiver domain V428_RS05400 SM00320 WD40 repeats V428_RS05410 SM00382 ATPases associated with a variety of cellular activities V428_RS05410 SM00448 cheY-homologous receiver domain V428_RS05435 SM00052 Putative diguanylate phosphodiesterase V428_RS05440 SM00978 V428_RS05440 V428_RS05445 SM00382 ATPases associated with a variety of cellular activities V428_RS05450 SM01005 Alanine racemase, C-terminal domain V428_RS05465 SM00052 Putative diguanylate phosphodiesterase V428_RS05495 SM00448 cheY-homologous receiver domain V428_RS05505 SM00138 Methyltransferase, chemotaxis proteins V428_RS05510 SM00091 PAS domain V428_RS05510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS05510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS05515 SM00260 Two component signalling adaptor domain V428_RS05520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS05520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS05525 SM00073 Histidine Phosphotransfer domain V428_RS05525 SM00260 Two component signalling adaptor domain V428_RS05525 SM00387 Histidine kinase-like ATPases V428_RS05525 SM01231 V428_RS05525 V428_RS05535 SM00448 cheY-homologous receiver domain V428_RS05540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS05585 SM00463 Small MutS-related domain V428_RS05610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS05610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS05660 SM00382 ATPases associated with a variety of cellular activities V428_RS05675 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS05675 SM00419 helix_turn_helix, cAMP Regulatory protein V428_RS05715 SM00342 helix_turn_helix, arabinose operon control protein V428_RS05735 SM00487 DEAD-like helicases superfamily V428_RS05740 SM00487 DEAD-like helicases superfamily V428_RS05740 SM00490 helicase superfamily c-terminal domain V428_RS05760 SM00487 DEAD-like helicases superfamily V428_RS05760 SM00490 helicase superfamily c-terminal domain V428_RS05830 SM00530 Helix-turn-helix XRE-family like proteins V428_RS05870 SM00830 Chorismate mutase type II V428_RS05905 SM00422 helix_turn_helix, mercury resistance V428_RS05990 SM00421 helix_turn_helix, Lux Regulon V428_RS06095 SM00900 V428_RS06095 V428_RS06135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS06135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS06165 SM01329 V428_RS06165 V428_RS06170 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V428_RS06170 SM00475 5'-3' exonuclease V428_RS06180 SM00267 diguanylate cyclase V428_RS06185 SM00028 Tetratricopeptide repeats V428_RS06265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS06310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_RS06320 SM00935 Outer membrane protein (OmpH-like) V428_RS06350 SM00481 DNA polymerase alpha chain like domain V428_RS06360 SM00862 Transcriptional regulatory protein, C terminal V428_RS06395 SM00849 Metallo-beta-lactamase superfamily V428_RS06415 SM00382 ATPases associated with a variety of cellular activities V428_RS06430 SM00977 TilS substrate C-terminal domain V428_RS06435 SM00267 diguanylate cyclase V428_RS06460 SM00421 helix_turn_helix, Lux Regulon V428_RS06460 SM00448 cheY-homologous receiver domain V428_RS06470 SM00642 Alpha-amylase domain V428_RS06495 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS06530 SM00771 ZipA, C-terminal domain (FtsZ-binding) V428_RS06535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_RS06535 SM00292 breast cancer carboxy-terminal domain V428_RS06535 SM00532 Ligase N family V428_RS06570 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS06585 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS06595 SM00919 Malic enzyme, NAD binding domain V428_RS06595 SM01274 V428_RS06595 V428_RS06600 SM00387 Histidine kinase-like ATPases V428_RS06605 SM00448 cheY-homologous receiver domain V428_RS06615 SM00342 helix_turn_helix, arabinose operon control protein V428_RS06625 SM00382 ATPases associated with a variety of cellular activities V428_RS06645 SM00448 cheY-homologous receiver domain V428_RS06645 SM00862 Transcriptional regulatory protein, C terminal V428_RS06650 SM00387 Histidine kinase-like ATPases V428_RS06650 SM00388 His Kinase A (phosphoacceptor) domain V428_RS06685 SM00382 ATPases associated with a variety of cellular activities V428_RS06745 SM00267 diguanylate cyclase V428_RS06760 SM00342 helix_turn_helix, arabinose operon control protein V428_RS06765 SM00919 Malic enzyme, NAD binding domain V428_RS06765 SM01274 V428_RS06765 V428_RS06790 SM00530 Helix-turn-helix XRE-family like proteins V428_RS06805 SM00267 diguanylate cyclase V428_RS06825 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS06865 SM00642 Alpha-amylase domain V428_RS06885 SM00155 Phospholipase D. Active site motifs. V428_RS06950 SM00487 DEAD-like helicases superfamily V428_RS06950 SM00490 helicase superfamily c-terminal domain V428_RS07040 SM00530 Helix-turn-helix XRE-family like proteins V428_RS07110 SM00382 ATPases associated with a variety of cellular activities V428_RS07125 SM01007 Class II Aldolase and Adducin N-terminal domain V428_RS07145 SM01134 V428_RS07145 V428_RS07155 SM01130 V428_RS07155 V428_RS07230 SM00877 V428_RS07230 V428_RS07260 SM00877 V428_RS07260 V428_RS07265 SM00877 V428_RS07265 V428_RS07270 SM00877 V428_RS07270 V428_RS07280 SM00862 Transcriptional regulatory protein, C terminal V428_RS07310 SM00481 DNA polymerase alpha chain like domain V428_RS07350 SM00387 Histidine kinase-like ATPases V428_RS07355 SM00448 cheY-homologous receiver domain V428_RS07355 SM00862 Transcriptional regulatory protein, C terminal V428_RS07360 SM00382 ATPases associated with a variety of cellular activities V428_RS07370 SM00382 ATPases associated with a variety of cellular activities V428_RS07395 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS07400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS07430 SM00382 ATPases associated with a variety of cellular activities V428_RS07490 SM00382 ATPases associated with a variety of cellular activities V428_RS07490 SM00962 SRP54-type protein, GTPase domain V428_RS07505 SM00448 cheY-homologous receiver domain V428_RS07515 SM00073 Histidine Phosphotransfer domain V428_RS07515 SM00260 Two component signalling adaptor domain V428_RS07515 SM00387 Histidine kinase-like ATPases V428_RS07515 SM01231 V428_RS07515 V428_RS07520 SM00448 cheY-homologous receiver domain V428_RS07540 SM00260 Two component signalling adaptor domain V428_RS07545 SM00260 Two component signalling adaptor domain V428_RS07555 SM00382 ATPases associated with a variety of cellular activities V428_RS07655 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. V428_RS07735 SM00354 helix_turn _helix lactose operon repressor V428_RS07770 SM00342 helix_turn_helix, arabinose operon control protein V428_RS07775 SM01329 V428_RS07775 V428_RS07830 SM00487 DEAD-like helicases superfamily V428_RS07980 SM00959 Rho termination factor, N-terminal domain V428_RS08070 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_RS08100 SM00858 V428_RS08100 V428_RS08120 SM00382 ATPases associated with a variety of cellular activities V428_RS08190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS08190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS08215 SM01091 Transporter associated domain V428_RS08275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS08285 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS08285 SM00876 Biotin and Thiamin Synthesis associated domain V428_RS08310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS08325 SM00890 Domain of unknown function V428_RS08335 SM00342 helix_turn_helix, arabinose operon control protein V428_RS08410 SM00458 Ricin-type beta-trefoil V428_RS08490 SM01081 Putative carbohydrate binding domain V428_RS08545 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS08560 SM00382 ATPases associated with a variety of cellular activities V428_RS08635 SM00052 Putative diguanylate phosphodiesterase V428_RS08635 SM00267 diguanylate cyclase V428_RS08645 SM00354 helix_turn _helix lactose operon repressor V428_RS08670 SM00257 Lysin motif V428_RS08675 SM00849 Metallo-beta-lactamase superfamily V428_RS08690 SM00479 V428_RS08690 V428_RS08700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS08720 SM00073 Histidine Phosphotransfer domain V428_RS08730 SM00897 FIST N domain V428_RS08730 SM01204 V428_RS08730 V428_RS08735 SM00387 Histidine kinase-like ATPases V428_RS08735 SM00388 His Kinase A (phosphoacceptor) domain V428_RS08735 SM00448 cheY-homologous receiver domain V428_RS08740 SM00464 Found in ATP-dependent protease La (LON) V428_RS08745 SM00421 helix_turn_helix, Lux Regulon V428_RS08745 SM00448 cheY-homologous receiver domain V428_RS08750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS08750 SM00387 Histidine kinase-like ATPases V428_RS08755 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS08770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS08795 SM00852 Probable molybdopterin binding domain V428_RS08825 SM00382 ATPases associated with a variety of cellular activities V428_RS08840 SM00852 Probable molybdopterin binding domain V428_RS08850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS08850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS08870 SM00867 YceI-like domain V428_RS08880 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain V428_RS08890 SM00563 Phosphate acyltransferases V428_RS08915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS08915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS08940 SM00855 Phosphoglycerate mutase family V428_RS08945 SM00487 DEAD-like helicases superfamily V428_RS08945 SM00490 helicase superfamily c-terminal domain V428_RS08965 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase V428_RS08970 SM00363 S4 RNA-binding domain V428_RS08995 SM00871 Bacterial transcription activator, effector binding domain V428_RS09020 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS09085 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_RS09085 SM01134 V428_RS09085 V428_RS09105 SM00830 Chorismate mutase type II V428_RS09180 SM00382 ATPases associated with a variety of cellular activities V428_RS09250 SM00382 ATPases associated with a variety of cellular activities V428_RS09255 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS09255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_RS09280 SM00052 Putative diguanylate phosphodiesterase V428_RS09280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS09280 SM00091 PAS domain V428_RS09280 SM00267 diguanylate cyclase V428_RS09285 SM00450 Rhodanese Homology Domain V428_RS09320 SM01359 V428_RS09320 V428_RS09320 SM01360 V428_RS09320 V428_RS09335 SM00981 V428_RS09335 V428_RS09405 SM00858 V428_RS09405 V428_RS09465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS09465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS09525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_RS09565 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS09580 SM01323 V428_RS09580 V428_RS09595 SM00450 Rhodanese Homology Domain V428_RS09600 SM00028 Tetratricopeptide repeats V428_RS09650 SM00271 DnaJ molecular chaperone homology domain V428_RS09675 SM00562 V428_RS09675 V428_RS09685 SM00028 Tetratricopeptide repeats V428_RS09690 SM00530 Helix-turn-helix XRE-family like proteins V428_RS09710 SM00564 beta-propeller repeat V428_RS09725 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS09730 SM01211 V428_RS09730 V428_RS09735 SM01126 V428_RS09735 V428_RS09775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS09775 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V428_RS09780 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V428_RS09845 SM00360 RNA recognition motif V428_RS09870 SM00091 PAS domain V428_RS09875 SM00448 cheY-homologous receiver domain V428_RS09890 SM00052 Putative diguanylate phosphodiesterase V428_RS09890 SM00267 diguanylate cyclase V428_RS09935 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS09940 SM00411 bacterial (prokaryotic) histone like domain V428_RS09950 SM00028 Tetratricopeptide repeats V428_RS09955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family V428_RS09965 SM01144 V428_RS09965 V428_RS09990 SM00528 Domain in histone-like proteins of HNS family V428_RS10005 SM01154 V428_RS10005 V428_RS10060 SM00357 Cold shock protein domain V428_RS10070 SM00382 ATPases associated with a variety of cellular activities V428_RS10070 SM01086 C-terminal, D2-small domain, of ClpB protein V428_RS10075 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS10095 SM00267 diguanylate cyclase V428_RS10095 SM00448 cheY-homologous receiver domain V428_RS10105 SM00344 helix_turn_helix ASNC type V428_RS10110 SM00843 V428_RS10110 V428_RS10120 SM00382 ATPases associated with a variety of cellular activities V428_RS10150 SM00382 ATPases associated with a variety of cellular activities V428_RS10155 SM00382 ATPases associated with a variety of cellular activities V428_RS10175 SM00382 ATPases associated with a variety of cellular activities V428_RS10220 SM00091 PAS domain V428_RS10220 SM00382 ATPases associated with a variety of cellular activities V428_RS10230 SM00267 diguanylate cyclase V428_RS10230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS10295 SM01007 Class II Aldolase and Adducin N-terminal domain V428_RS10310 SM00382 ATPases associated with a variety of cellular activities V428_RS10320 SM00342 helix_turn_helix, arabinose operon control protein V428_RS10385 SM00825 Beta-ketoacyl synthase V428_RS10425 SM00861 Transketolase, pyrimidine binding domain V428_RS10440 SM00881 CoA binding domain V428_RS10465 SM00382 ATPases associated with a variety of cellular activities V428_RS10475 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS10475 SM00866 V428_RS10475 V428_RS10515 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_RS10545 SM00822 V428_RS10545 V428_RS10550 SM00342 helix_turn_helix, arabinose operon control protein V428_RS10550 SM00871 Bacterial transcription activator, effector binding domain V428_RS10580 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS10685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS10685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS10685 SM01049 V428_RS10685 V428_RS10695 SM00091 PAS domain V428_RS10695 SM00387 Histidine kinase-like ATPases V428_RS10700 SM00448 cheY-homologous receiver domain V428_RS10720 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS10735 SM00487 DEAD-like helicases superfamily V428_RS10735 SM00490 helicase superfamily c-terminal domain V428_RS10760 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS10775 SM00763 PrkA AAA domain V428_RS10780 SM00487 DEAD-like helicases superfamily V428_RS10780 SM00490 helicase superfamily c-terminal domain V428_RS10840 SM00387 Histidine kinase-like ATPases V428_RS10840 SM00388 His Kinase A (phosphoacceptor) domain V428_RS10840 SM00448 cheY-homologous receiver domain V428_RS10845 SM00382 ATPases associated with a variety of cellular activities V428_RS10850 SM00382 ATPases associated with a variety of cellular activities V428_RS10915 SM01118 V428_RS10915 V428_RS10940 SM00487 DEAD-like helicases superfamily V428_RS10940 SM00490 helicase superfamily c-terminal domain V428_RS10950 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. V428_RS10965 SM01144 V428_RS10965 V428_RS10985 SM00342 helix_turn_helix, arabinose operon control protein V428_RS11000 SM00642 Alpha-amylase domain V428_RS11130 SM00782 PhnA Zinc-Ribbon V428_RS11140 SM00495 Chitin-binding domain type 3 V428_RS11155 SM00855 Phosphoglycerate mutase family V428_RS11160 SM00091 PAS domain V428_RS11160 SM00267 diguanylate cyclase V428_RS11170 SM00463 Small MutS-related domain V428_RS11185 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS11190 SM00487 DEAD-like helicases superfamily V428_RS11190 SM00490 helicase superfamily c-terminal domain V428_RS11195 SM00953 V428_RS11195 V428_RS11210 SM00354 helix_turn _helix lactose operon repressor V428_RS11235 SM00354 helix_turn _helix lactose operon repressor V428_RS11275 SM00925 MltA specific insert domain V428_RS11305 SM00434 DNA Topoisomerase IV V428_RS11315 SM00671 Sel1-like repeats. V428_RS11320 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V428_RS11345 SM00873 B3/4 domain V428_RS11345 SM00874 tRNA synthetase B5 domain V428_RS11345 SM00896 Ferredoxin-fold anticodon binding domain V428_RS11350 SM00411 bacterial (prokaryotic) histone like domain V428_RS11355 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS11355 SM00387 Histidine kinase-like ATPases V428_RS11355 SM00388 His Kinase A (phosphoacceptor) domain V428_RS11355 SM00448 cheY-homologous receiver domain V428_RS11380 SM00267 diguanylate cyclase V428_RS11385 SM00354 helix_turn _helix lactose operon repressor V428_RS11405 SM00382 ATPases associated with a variety of cellular activities V428_RS11440 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS11440 SM00419 helix_turn_helix, cAMP Regulatory protein V428_RS11495 SM00945 ProQ/FINO family V428_RS11500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_RS11500 SM00245 tail specific protease V428_RS11530 SM00981 V428_RS11530 V428_RS11540 SM00382 ATPases associated with a variety of cellular activities V428_RS11575 SM00822 V428_RS11575 V428_RS11665 SM00382 ATPases associated with a variety of cellular activities V428_RS11685 SM00825 Beta-ketoacyl synthase V428_RS11695 SM00822 V428_RS11695 V428_RS11700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. V428_RS11750 SM00363 S4 RNA-binding domain V428_RS11755 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS11795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS11800 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V428_RS11825 SM00450 Rhodanese Homology Domain V428_RS11830 SM00849 Metallo-beta-lactamase superfamily V428_RS11835 SM00448 cheY-homologous receiver domain V428_RS11835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS11840 SM00387 Histidine kinase-like ATPases V428_RS11840 SM00388 His Kinase A (phosphoacceptor) domain V428_RS11840 SM00448 cheY-homologous receiver domain V428_RS11855 SM00382 ATPases associated with a variety of cellular activities V428_RS11855 SM00487 DEAD-like helicases superfamily V428_RS11855 SM00490 helicase superfamily c-terminal domain V428_RS11855 SM00847 Helicase associated domain (HA2) Add an annotation V428_RS11860 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS11865 SM00421 helix_turn_helix, Lux Regulon V428_RS11880 SM00382 ATPases associated with a variety of cellular activities V428_RS11915 SM00857 Resolvase, N terminal domain V428_RS12010 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS12015 SM00341 Helicase and RNase D C-terminal V428_RS12015 SM00474 3'-5' exonuclease V428_RS12040 SM00491 V428_RS12040 V428_RS12080 SM00448 cheY-homologous receiver domain V428_RS12080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS12085 SM00091 PAS domain V428_RS12090 SM00073 Histidine Phosphotransfer domain V428_RS12090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS12090 SM00091 PAS domain V428_RS12090 SM00387 Histidine kinase-like ATPases V428_RS12090 SM00388 His Kinase A (phosphoacceptor) domain V428_RS12090 SM00448 cheY-homologous receiver domain V428_RS12125 SM00237 Domains in Na-Ca exchangers and integrin-beta4 V428_RS12135 SM01092 CO dehydrogenase flavoprotein C-terminal domain V428_RS12140 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V428_RS12160 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V428_RS12165 SM01092 CO dehydrogenase flavoprotein C-terminal domain V428_RS12225 SM00382 ATPases associated with a variety of cellular activities V428_RS12255 SM01322 V428_RS12255 V428_RS12285 SM00327 von Willebrand factor (vWF) type A domain V428_RS12290 SM00028 Tetratricopeptide repeats V428_RS12320 SM00052 Putative diguanylate phosphodiesterase V428_RS12330 SM00422 helix_turn_helix, mercury resistance V428_RS12410 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS12480 SM00486 DNA polymerase type-B family V428_RS12490 SM00267 diguanylate cyclase V428_RS12500 SM00090 RIO-like kinase V428_RS12530 SM00518 AP endonuclease family 2 V428_RS12540 SM00822 V428_RS12540 V428_RS12545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS12555 SM00052 Putative diguanylate phosphodiesterase V428_RS12555 SM00267 diguanylate cyclase V428_RS12570 SM00267 diguanylate cyclase V428_RS12620 SM00857 Resolvase, N terminal domain V428_RS12640 SM00052 Putative diguanylate phosphodiesterase V428_RS12640 SM00448 cheY-homologous receiver domain V428_RS12670 SM00822 V428_RS12670 V428_RS12715 SM00878 Biotin carboxylase C-terminal domain V428_RS12715 SM01209 V428_RS12715 V428_RS12725 SM00422 helix_turn_helix, mercury resistance V428_RS12730 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS12795 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS12795 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS12800 SM00479 V428_RS12800 V428_RS12815 SM00382 ATPases associated with a variety of cellular activities V428_RS12830 SM00382 ATPases associated with a variety of cellular activities V428_RS12830 SM00464 Found in ATP-dependent protease La (LON) V428_RS12835 SM00382 ATPases associated with a variety of cellular activities V428_RS12835 SM00994 ClpX C4-type zinc finger V428_RS12835 SM01086 C-terminal, D2-small domain, of ClpB protein V428_RS12855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS12865 SM00382 ATPases associated with a variety of cellular activities V428_RS12880 SM00487 DEAD-like helicases superfamily V428_RS12880 SM00490 helicase superfamily c-terminal domain V428_RS12880 SM00982 V428_RS12880 V428_RS12880 SM01058 CarD-like/TRCF domain V428_RS12905 SM00855 Phosphoglycerate mutase family V428_RS12920 SM00369 Leucine-rich repeats, typical (most populated) subfamily V428_RS12930 SM00342 helix_turn_helix, arabinose operon control protein V428_RS13000 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS13000 SM01240 V428_RS13000 V428_RS13035 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS13040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS13040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS13060 SM00893 Electron transfer flavoprotein domain V428_RS13065 SM00893 Electron transfer flavoprotein domain V428_RS13110 SM00382 ATPases associated with a variety of cellular activities V428_RS13130 SM00823 Phosphopantetheine attachment site V428_RS13135 SM00822 V428_RS13135 V428_RS13140 SM00823 Phosphopantetheine attachment site V428_RS13210 SM00387 Histidine kinase-like ATPases V428_RS13215 SM00493 V428_RS13215 V428_RS13225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS13225 SM00382 ATPases associated with a variety of cellular activities V428_RS13240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS13335 SM00382 ATPases associated with a variety of cellular activities V428_RS13340 SM00382 ATPases associated with a variety of cellular activities V428_RS13390 SM00448 cheY-homologous receiver domain V428_RS13400 SM00073 Histidine Phosphotransfer domain V428_RS13400 SM00260 Two component signalling adaptor domain V428_RS13400 SM00387 Histidine kinase-like ATPases V428_RS13400 SM01231 V428_RS13400 V428_RS13405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS13410 SM00260 Two component signalling adaptor domain V428_RS13415 SM00138 Methyltransferase, chemotaxis proteins V428_RS13420 SM00448 cheY-homologous receiver domain V428_RS13425 SM00052 Putative diguanylate phosphodiesterase V428_RS13425 SM00448 cheY-homologous receiver domain V428_RS13430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS13430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS13435 SM01005 Alanine racemase, C-terminal domain V428_RS13440 SM00873 B3/4 domain V428_RS13445 SM00530 Helix-turn-helix XRE-family like proteins V428_RS13570 SM00382 ATPases associated with a variety of cellular activities V428_RS13810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS13810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS13845 SM01005 Alanine racemase, C-terminal domain V428_RS13855 SM00382 ATPases associated with a variety of cellular activities V428_RS13865 SM00382 ATPases associated with a variety of cellular activities V428_RS13900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS13905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS13910 SM00448 cheY-homologous receiver domain V428_RS13910 SM00850 LytTr DNA-binding domain V428_RS13930 SM00487 DEAD-like helicases superfamily V428_RS13930 SM00490 helicase superfamily c-terminal domain V428_RS13965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS13965 SM00091 PAS domain V428_RS13965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS14000 SM00900 V428_RS14000 V428_RS14010 SM00478 endonuclease III V428_RS14010 SM00525 V428_RS14010 V428_RS14025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS14030 SM00479 V428_RS14030 V428_RS14040 SM00487 DEAD-like helicases superfamily V428_RS14040 SM00490 helicase superfamily c-terminal domain V428_RS14065 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS14065 SM01091 Transporter associated domain V428_RS14140 SM00267 diguanylate cyclase V428_RS14145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS14225 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_RS14235 SM00014 Acid phosphatase homologues V428_RS14250 SM00342 helix_turn_helix, arabinose operon control protein V428_RS14250 SM00871 Bacterial transcription activator, effector binding domain V428_RS14275 SM01217 V428_RS14275 V428_RS14280 SM00342 helix_turn_helix, arabinose operon control protein V428_RS14340 SM00052 Putative diguanylate phosphodiesterase V428_RS14340 SM00267 diguanylate cyclase V428_RS14360 SM00382 ATPases associated with a variety of cellular activities V428_RS14365 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS14380 SM00382 ATPases associated with a variety of cellular activities V428_RS14390 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS14405 SM00422 helix_turn_helix, mercury resistance V428_RS14420 SM01351 V428_RS14420 V428_RS14430 SM00487 DEAD-like helicases superfamily V428_RS14430 SM00490 helicase superfamily c-terminal domain V428_RS14445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS14465 SM00917 LeuA allosteric (dimerisation) domain V428_RS14470 SM00851 MGS-like domain V428_RS14470 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V428_RS14475 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain V428_RS14525 SM00382 ATPases associated with a variety of cellular activities V428_RS14535 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS14545 SM00382 ATPases associated with a variety of cellular activities V428_RS14570 SM00899 V428_RS14570 V428_RS14600 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS14605 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS14610 SM00267 diguanylate cyclase V428_RS14625 SM00840 V428_RS14625 V428_RS14760 SM00382 ATPases associated with a variety of cellular activities V428_RS14845 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_RS14845 SM00465 GIY-YIG type nucleases (URI domain) V428_RS14850 SM00421 helix_turn_helix, Lux Regulon V428_RS14850 SM00448 cheY-homologous receiver domain V428_RS14870 SM00382 ATPases associated with a variety of cellular activities V428_RS14875 SM00849 Metallo-beta-lactamase superfamily V428_RS14905 SM00528 Domain in histone-like proteins of HNS family V428_RS14935 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS14940 SM00873 B3/4 domain V428_RS15015 SM00491 V428_RS15015 V428_RS15040 SM00098 Alkaline phosphatase homologues V428_RS15045 SM00098 Alkaline phosphatase homologues V428_RS15070 SM00421 helix_turn_helix, Lux Regulon V428_RS15070 SM00448 cheY-homologous receiver domain V428_RS15075 SM00387 Histidine kinase-like ATPases V428_RS15085 SM00267 diguanylate cyclase V428_RS15090 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS15090 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_RS15100 SM00382 ATPases associated with a variety of cellular activities V428_RS15130 SM01091 Transporter associated domain V428_RS15140 SM00382 ATPases associated with a variety of cellular activities V428_RS15205 SM00382 ATPases associated with a variety of cellular activities V428_RS15205 SM00448 cheY-homologous receiver domain V428_RS15210 SM00091 PAS domain V428_RS15210 SM00387 Histidine kinase-like ATPases V428_RS15210 SM00388 His Kinase A (phosphoacceptor) domain V428_RS15215 SM00382 ATPases associated with a variety of cellular activities V428_RS15240 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS15240 SM00924 MgtE intracellular N domain V428_RS15255 SM00047 Lysozyme subfamily 2 V428_RS15300 SM00138 Methyltransferase, chemotaxis proteins V428_RS15305 SM00260 Two component signalling adaptor domain V428_RS15305 SM00448 cheY-homologous receiver domain V428_RS15310 SM00858 V428_RS15310 V428_RS15340 SM00363 S4 RNA-binding domain V428_RS15345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS15370 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_RS15370 SM01134 V428_RS15370 V428_RS15405 SM00357 Cold shock protein domain V428_RS15415 SM00861 Transketolase, pyrimidine binding domain V428_RS15440 SM00487 DEAD-like helicases superfamily V428_RS15440 SM00490 helicase superfamily c-terminal domain V428_RS15575 SM00363 S4 RNA-binding domain V428_RS15595 SM00481 DNA polymerase alpha chain like domain V428_RS15645 SM00247 Beta/gamma crystallins V428_RS15725 SM00530 Helix-turn-helix XRE-family like proteins V428_RS15815 SM00448 cheY-homologous receiver domain V428_RS15815 SM00862 Transcriptional regulatory protein, C terminal V428_RS15830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS15830 SM00387 Histidine kinase-like ATPases V428_RS15830 SM00388 His Kinase A (phosphoacceptor) domain V428_RS15830 SM00448 cheY-homologous receiver domain V428_RS15910 SM00028 Tetratricopeptide repeats V428_RS15910 SM00448 cheY-homologous receiver domain V428_RS15970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS15970 SM00091 PAS domain V428_RS15970 SM00267 diguanylate cyclase V428_RS15995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_RS16015 SM00354 helix_turn _helix lactose operon repressor V428_RS16020 SM00640 Glycosyl hydrolases family 32 V428_RS16040 SM00271 DnaJ molecular chaperone homology domain V428_RS16070 SM01131 V428_RS16070 V428_RS16085 SM00382 ATPases associated with a variety of cellular activities V428_RS16110 SM00528 Domain in histone-like proteins of HNS family V428_RS16130 SM00530 Helix-turn-helix XRE-family like proteins V428_RS16180 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS16180 SM00387 Histidine kinase-like ATPases V428_RS16180 SM00388 His Kinase A (phosphoacceptor) domain V428_RS16180 SM00448 cheY-homologous receiver domain V428_RS16180 SM00918 Ligated ion channel L-glutamate- and glycine-binding site V428_RS16205 SM00382 ATPases associated with a variety of cellular activities V428_RS16270 SM00448 cheY-homologous receiver domain V428_RS16270 SM00862 Transcriptional regulatory protein, C terminal V428_RS16285 SM00382 ATPases associated with a variety of cellular activities V428_RS16290 SM00382 ATPases associated with a variety of cellular activities V428_RS16325 SM00382 ATPases associated with a variety of cellular activities V428_RS16350 SM00267 diguanylate cyclase V428_RS16450 SM00919 Malic enzyme, NAD binding domain V428_RS16450 SM01274 V428_RS16450 V428_RS16455 SM00387 Histidine kinase-like ATPases V428_RS16455 SM00448 cheY-homologous receiver domain V428_RS16470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS16515 SM00387 Histidine kinase-like ATPases V428_RS16515 SM00388 His Kinase A (phosphoacceptor) domain V428_RS16520 SM00382 ATPases associated with a variety of cellular activities V428_RS16520 SM00448 cheY-homologous receiver domain V428_RS16535 SM00382 ATPases associated with a variety of cellular activities V428_RS16545 SM00852 Probable molybdopterin binding domain V428_RS16555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS16565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS16565 SM00091 PAS domain V428_RS16565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS16615 SM00091 PAS domain V428_RS16615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS16615 SM00387 Histidine kinase-like ATPases V428_RS16615 SM00388 His Kinase A (phosphoacceptor) domain V428_RS16615 SM00448 cheY-homologous receiver domain V428_RS16635 SM00382 ATPases associated with a variety of cellular activities V428_RS16640 SM00382 ATPases associated with a variety of cellular activities V428_RS16675 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V428_RS16675 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V428_RS16675 SM00493 V428_RS16675 V428_RS16720 SM00788 Adenylosuccinate synthetase V428_RS16730 SM00342 helix_turn_helix, arabinose operon control protein V428_RS16740 SM00363 S4 RNA-binding domain V428_RS16775 SM00052 Putative diguanylate phosphodiesterase V428_RS16785 SM00861 Transketolase, pyrimidine binding domain V428_RS16795 SM00731 SprT homologues. V428_RS16815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS16825 SM00732 Likely ribonuclease with RNase H fold. V428_RS16850 SM00460 Transglutaminase/protease-like homologues V428_RS16875 SM00986 Uracil DNA glycosylase superfamily V428_RS16875 SM00987 UreE urease accessory protein, C-terminal domain V428_RS16910 SM00937 V428_RS16910 V428_RS16935 SM01400 V428_RS16935 V428_RS17010 SM00100 Cyclic nucleotide-monophosphate binding domain V428_RS17015 SM01022 V428_RS17015 V428_RS17025 SM00642 Alpha-amylase domain V428_RS17035 SM00890 Domain of unknown function V428_RS17050 SM01150 V428_RS17050 V428_RS17115 SM00965 Secretin and TonB N terminus short domain V428_RS17135 SM00842 Cell division protein FtsA V428_RS17150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS17150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS17160 SM00849 Metallo-beta-lactamase superfamily V428_RS17200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS17200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS17260 SM01236 V428_RS17260 V428_RS17265 SM00822 V428_RS17265 V428_RS17275 SM00448 cheY-homologous receiver domain V428_RS17275 SM00862 Transcriptional regulatory protein, C terminal V428_RS17280 SM00387 Histidine kinase-like ATPases V428_RS17280 SM00388 His Kinase A (phosphoacceptor) domain V428_RS17290 SM01240 V428_RS17290 V428_RS17300 SM00841 Elongation factor P, C-terminal V428_RS17300 SM01185 V428_RS17300 V428_RS17325 SM00267 diguanylate cyclase V428_RS17350 SM00267 diguanylate cyclase V428_RS17355 SM00357 Cold shock protein domain V428_RS17370 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS17385 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS17385 SM01091 Transporter associated domain V428_RS17450 SM00936 Penicillin-binding protein 5, C-terminal domain V428_RS17465 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_RS17495 SM00422 helix_turn_helix, mercury resistance V428_RS17570 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS17585 SM00387 Histidine kinase-like ATPases V428_RS17585 SM00388 His Kinase A (phosphoacceptor) domain V428_RS17590 SM00421 helix_turn_helix, Lux Regulon V428_RS17590 SM00448 cheY-homologous receiver domain V428_RS17600 SM00448 cheY-homologous receiver domain V428_RS17600 SM00850 LytTr DNA-binding domain V428_RS17630 SM00267 diguanylate cyclase V428_RS17640 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS17640 SM00322 K homology RNA-binding domain V428_RS17645 SM01387 V428_RS17645 V428_RS17665 SM00316 Ribosomal protein S1-like RNA-binding domain V428_RS17705 SM00382 ATPases associated with a variety of cellular activities V428_RS17715 SM01103 V428_RS17715 V428_RS17750 SM00861 Transketolase, pyrimidine binding domain V428_RS17770 SM00382 ATPases associated with a variety of cellular activities V428_RS17865 SM00052 Putative diguanylate phosphodiesterase V428_RS17865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS17865 SM00091 PAS domain V428_RS17865 SM00267 diguanylate cyclase V428_RS17890 SM00878 Biotin carboxylase C-terminal domain V428_RS17915 SM00829 Enoylreductase V428_RS17930 SM01266 V428_RS17930 V428_RS17960 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_RS17970 SM00870 V428_RS17970 V428_RS17980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS17980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS17985 SM00937 V428_RS17985 V428_RS18025 SM00382 ATPases associated with a variety of cellular activities V428_RS18050 SM00852 Probable molybdopterin binding domain V428_RS18060 SM00825 Beta-ketoacyl synthase V428_RS18065 SM00822 V428_RS18065 V428_RS18075 SM00825 Beta-ketoacyl synthase V428_RS18135 SM00563 Phosphate acyltransferases V428_RS18160 SM00477 DNA/RNA non-specific endonuclease V428_RS18160 SM00892 DNA/RNA non-specific endonuclease V428_RS18170 SM01057 Eukaryotic-type carbonic anhydrase V428_RS18195 SM00382 ATPases associated with a variety of cellular activities V428_RS18210 SM01012 V428_RS18210 V428_RS18220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_RS18250 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V428_RS18275 SM00382 ATPases associated with a variety of cellular activities V428_RS18280 SM00382 ATPases associated with a variety of cellular activities V428_RS18330 SM00028 Tetratricopeptide repeats V428_RS18335 SM00495 Chitin-binding domain type 3 V428_RS18335 SM00636 V428_RS18335 V428_RS18380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS18380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS18390 SM00357 Cold shock protein domain V428_RS18425 SM00479 V428_RS18425 V428_RS18460 SM00052 Putative diguanylate phosphodiesterase V428_RS18460 SM00091 PAS domain V428_RS18460 SM00267 diguanylate cyclase V428_RS18490 SM00382 ATPases associated with a variety of cellular activities V428_RS18505 SM00450 Rhodanese Homology Domain V428_RS18535 SM00052 Putative diguanylate phosphodiesterase V428_RS18550 SM00382 ATPases associated with a variety of cellular activities V428_RS18560 SM00260 Two component signalling adaptor domain V428_RS18560 SM00448 cheY-homologous receiver domain V428_RS18600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_RS18615 SM00448 cheY-homologous receiver domain V428_RS18625 SM00382 ATPases associated with a variety of cellular activities V428_RS18720 SM00014 Acid phosphatase homologues V428_RS18730 SM00448 cheY-homologous receiver domain V428_RS18730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS18760 SM00487 DEAD-like helicases superfamily V428_RS18760 SM00490 helicase superfamily c-terminal domain V428_RS18760 SM00847 Helicase associated domain (HA2) Add an annotation V428_RS18805 SM00450 Rhodanese Homology Domain V428_RS18835 SM00382 ATPases associated with a variety of cellular activities V428_RS18890 SM00382 ATPases associated with a variety of cellular activities V428_RS18910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS18955 SM00244 prohibitin homologues V428_RS18965 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS18970 SM00382 ATPases associated with a variety of cellular activities V428_RS19070 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS19135 SM00344 helix_turn_helix ASNC type V428_RS19150 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS19160 SM00829 Enoylreductase V428_RS19180 SM00642 Alpha-amylase domain V428_RS19185 SM00642 Alpha-amylase domain V428_RS19195 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_RS19210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS19210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS19310 SM00382 ATPases associated with a variety of cellular activities V428_RS19315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_RS19320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS19320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS19380 SM01152 V428_RS19380 V428_RS19400 SM00382 ATPases associated with a variety of cellular activities V428_RS19415 SM00487 DEAD-like helicases superfamily V428_RS19415 SM00490 helicase superfamily c-terminal domain V428_RS19460 SM00411 bacterial (prokaryotic) histone like domain V428_RS19475 SM00382 ATPases associated with a variety of cellular activities V428_RS19500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS19500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS19500 SM00091 PAS domain V428_RS19500 SM00267 diguanylate cyclase V428_RS19515 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain V428_RS19520 SM01133 V428_RS19520 V428_RS19585 SM00530 Helix-turn-helix XRE-family like proteins V428_RS19805 SM01091 Transporter associated domain V428_RS19860 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V428_RS19870 SM00382 ATPases associated with a variety of cellular activities V428_RS19895 SM00533 DNA-binding domain of DNA mismatch repair MUTS family V428_RS19895 SM00534 ATPase domain of DNA mismatch repair MUTS family V428_RS19910 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_RS19950 SM00382 ATPases associated with a variety of cellular activities V428_RS19970 SM00986 Uracil DNA glycosylase superfamily V428_RS19970 SM00987 UreE urease accessory protein, C-terminal domain V428_RS20005 SM00563 Phosphate acyltransferases V428_RS20035 SM00271 DnaJ molecular chaperone homology domain V428_RS20070 SM00434 DNA Topoisomerase IV V428_RS20075 SM00387 Histidine kinase-like ATPases V428_RS20075 SM00433 TopoisomeraseII V428_RS20145 SM01118 V428_RS20145 V428_RS20170 SM00450 Rhodanese Homology Domain V428_RS20180 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS20210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_RS20220 SM00382 ATPases associated with a variety of cellular activities V428_RS20230 SM00478 endonuclease III V428_RS20230 SM00525 V428_RS20230 V428_RS20255 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS20295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS20295 SM00267 diguanylate cyclase V428_RS20300 SM01130 V428_RS20300 V428_RS20370 SM00382 ATPases associated with a variety of cellular activities V428_RS20400 SM00344 helix_turn_helix ASNC type V428_RS20405 SM01266 V428_RS20405 V428_RS20410 SM00642 Alpha-amylase domain V428_RS20420 SM00354 helix_turn _helix lactose operon repressor V428_RS20435 SM00870 V428_RS20435 V428_RS20450 SM00851 MGS-like domain V428_RS20485 SM00260 Two component signalling adaptor domain V428_RS20485 SM00448 cheY-homologous receiver domain V428_RS20530 SM01207 V428_RS20530 V428_RS20535 SM00905 Dihydroneopterin aldolase V428_RS20555 SM00833 Cobalamin synthesis protein cobW C-terminal domain V428_RS20590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS20590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS20595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS20605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_RS20605 SM00267 diguanylate cyclase V428_RS20625 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS20625 SM00895 V428_RS20625 V428_RS20690 SM00957 SecA DEAD-like domain V428_RS20690 SM00958 SecA preprotein cross-linking domain V428_RS20705 SM00864 Tubulin/FtsZ family, GTPase domain V428_RS20705 SM00865 Tubulin/FtsZ family, C-terminal domain V428_RS20710 SM00842 Cell division protein FtsA V428_RS20795 SM00749 bacterial OsmY and nodulation domain V428_RS20845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_RS20850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_RS20925 SM00382 ATPases associated with a variety of cellular activities V428_RS20945 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS20950 SM00382 ATPases associated with a variety of cellular activities V428_RS21035 SM00530 Helix-turn-helix XRE-family like proteins V428_RS21065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS21065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS21085 SM00421 helix_turn_helix, Lux Regulon V428_RS21095 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS21110 SM00357 Cold shock protein domain V428_RS21120 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS21120 SM00267 diguanylate cyclase V428_RS21125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS21125 SM00387 Histidine kinase-like ATPases V428_RS21125 SM00388 His Kinase A (phosphoacceptor) domain V428_RS21130 SM00448 cheY-homologous receiver domain V428_RS21130 SM00862 Transcriptional regulatory protein, C terminal V428_RS21155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_RS21155 SM00091 PAS domain V428_RS21155 SM00267 diguanylate cyclase V428_RS21210 SM00530 Helix-turn-helix XRE-family like proteins V428_RS21215 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_RS21215 SM00866 V428_RS21215 V428_RS21240 SM00382 ATPases associated with a variety of cellular activities V428_RS21250 SM00267 diguanylate cyclase V428_RS21265 SM00342 helix_turn_helix, arabinose operon control protein V428_RS21265 SM00871 Bacterial transcription activator, effector binding domain V428_RS21275 SM01060 V428_RS21275 V428_RS21300 SM00014 Acid phosphatase homologues V428_RS21310 SM00822 V428_RS21310 V428_RS21325 SM00091 PAS domain V428_RS21340 SM01120 V428_RS21340 V428_RS21400 SM00838 Elongation factor G C-terminus V428_RS21400 SM00889 Elongation factor G, domain IV V428_RS21440 SM01126 V428_RS21440 V428_RS21445 SM00663 RNA polymerase I subunit A N-terminus V428_RS21470 SM00649 Ribosomal protein L11/L12 V428_RS21475 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V428_RS21475 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. V428_RS21530 SM00342 helix_turn_helix, arabinose operon control protein V428_RS21545 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V428_RS21545 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V428_RS21545 SM00493 V428_RS21545 V428_RS21565 SM00387 Histidine kinase-like ATPases V428_RS21570 SM00448 cheY-homologous receiver domain V428_RS21570 SM00862 Transcriptional regulatory protein, C terminal V428_RS21600 SM00382 ATPases associated with a variety of cellular activities V428_RS21600 SM00448 cheY-homologous receiver domain V428_RS21610 SM00387 Histidine kinase-like ATPases V428_RS21610 SM00388 His Kinase A (phosphoacceptor) domain V428_RS21625 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_RS21635 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS21640 SM00344 helix_turn_helix ASNC type V428_RS21650 SM00849 Metallo-beta-lactamase superfamily V428_RS21655 SM00382 ATPases associated with a variety of cellular activities V428_RS21655 SM01086 C-terminal, D2-small domain, of ClpB protein V428_RS21665 SM00363 S4 RNA-binding domain V428_RS21705 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V428_RS21705 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V428_RS21715 SM00342 helix_turn_helix, arabinose operon control protein V428_RS21725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS21725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS21790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS21790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS21800 SM00382 ATPases associated with a variety of cellular activities V428_RS21810 SM01038 Beta galactosidase small chain V428_RS21815 SM00354 helix_turn _helix lactose operon repressor V428_RS21860 SM00464 Found in ATP-dependent protease La (LON) V428_RS21865 SM00836 DALR anticodon binding domain V428_RS21865 SM01016 Arginyl tRNA synthetase N terminal dom V428_RS21880 SM00382 ATPases associated with a variety of cellular activities V428_RS21880 SM01086 C-terminal, D2-small domain, of ClpB protein V428_RS21915 SM00924 MgtE intracellular N domain V428_RS21920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_RS21920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS21920 SM01358 V428_RS21920 V428_RS21950 SM00341 Helicase and RNase D C-terminal V428_RS21950 SM00487 DEAD-like helicases superfamily V428_RS21950 SM00490 helicase superfamily c-terminal domain V428_RS21950 SM00956 V428_RS21950 V428_RS21985 SM00382 ATPases associated with a variety of cellular activities V428_RS22005 SM01230 V428_RS22005 V428_RS22050 SM00642 Alpha-amylase domain V428_RS22070 SM00448 cheY-homologous receiver domain V428_RS22070 SM00862 Transcriptional regulatory protein, C terminal V428_RS22075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_RS22075 SM00387 Histidine kinase-like ATPases V428_RS22075 SM00388 His Kinase A (phosphoacceptor) domain V428_RS22085 SM00919 Malic enzyme, NAD binding domain V428_RS22085 SM01274 V428_RS22085 V428_RS22100 SM00487 DEAD-like helicases superfamily V428_RS22100 SM00490 helicase superfamily c-terminal domain V428_RS22140 SM00382 ATPases associated with a variety of cellular activities V428_RS22145 SM00563 Phosphate acyltransferases V428_RS22150 SM00563 Phosphate acyltransferases V428_RS22175 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS22180 SM00382 ATPases associated with a variety of cellular activities V428_RS22210 SM00267 diguanylate cyclase V428_RS22215 SM00422 helix_turn_helix, mercury resistance V428_RS22285 SM00829 Enoylreductase V428_RS22295 SM00052 Putative diguanylate phosphodiesterase V428_RS22295 SM00267 diguanylate cyclase V428_RS22375 SM00421 helix_turn_helix, Lux Regulon V428_RS22385 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_RS22385 SM01134 V428_RS22385 V428_RS22390 SM00448 cheY-homologous receiver domain V428_RS22390 SM00862 Transcriptional regulatory protein, C terminal V428_RS22395 SM00387 Histidine kinase-like ATPases V428_RS22395 SM00388 His Kinase A (phosphoacceptor) domain V428_RS22420 SM00382 ATPases associated with a variety of cellular activities V428_RS22460 SM00470 ParB-like nuclease domain V428_RS22475 SM01228 V428_RS22475 V428_RS22490 SM00382 ATPases associated with a variety of cellular activities V428_RS22495 SM00382 ATPases associated with a variety of cellular activities V428_RS22525 SM00382 ATPases associated with a variety of cellular activities V428_RS22535 SM00062 Bacterial periplasmic substrate-binding proteins V428_RS22535 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_RS22560 SM00862 Transcriptional regulatory protein, C terminal V428_RS22620 SM00344 helix_turn_helix ASNC type V428_RS22625 SM01130 V428_RS22625