AhyD4_RS00005 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AhyD4_RS00010 SM00480 DNA polymerase III beta subunit AhyD4_RS00020 SM00387 Histidine kinase-like ATPases AhyD4_RS00020 SM00433 TopoisomeraseII AhyD4_RS00055 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS00065 SM00448 cheY-homologous receiver domain AhyD4_RS00065 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS00070 SM00387 Histidine kinase-like ATPases AhyD4_RS00070 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS00095 SM00091 PAS domain AhyD4_RS00095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS00095 SM00387 Histidine kinase-like ATPases AhyD4_RS00135 SM00458 Ricin-type beta-trefoil AhyD4_RS00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS00155 SM00387 Histidine kinase-like ATPases AhyD4_RS00155 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS00160 SM00448 cheY-homologous receiver domain AhyD4_RS00190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS00190 SM00954 Region found in RelA / SpoT proteins AhyD4_RS00195 SM01409 AhyD4_RS00195 AhyD4_RS00200 SM00072 Guanylate kinase homologues. AhyD4_RS00215 SM00267 diguanylate cyclase AhyD4_RS00255 SM00267 diguanylate cyclase AhyD4_RS00305 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS00305 SM00448 cheY-homologous receiver domain AhyD4_RS00310 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS00310 SM00387 Histidine kinase-like ATPases AhyD4_RS00310 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS00310 SM00448 cheY-homologous receiver domain AhyD4_RS00320 SM00387 Histidine kinase-like ATPases AhyD4_RS00325 SM00448 cheY-homologous receiver domain AhyD4_RS00325 SM00850 LytTr DNA-binding domain AhyD4_RS00340 SM01001 AIR carboxylase AhyD4_RS00370 SM00360 RNA recognition motif AhyD4_RS00420 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS00505 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS00520 SM00528 Domain in histone-like proteins of HNS family AhyD4_RS00535 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS00565 SM00671 Sel1-like repeats. AhyD4_RS00640 SM00327 von Willebrand factor (vWF) type A domain AhyD4_RS00670 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS00670 SM00267 diguanylate cyclase AhyD4_RS00680 SM00829 Enoylreductase AhyD4_RS00750 SM00422 helix_turn_helix, mercury resistance AhyD4_RS00755 SM00267 diguanylate cyclase AhyD4_RS00785 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS00790 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS00815 SM00563 Phosphate acyltransferases AhyD4_RS00820 SM00563 Phosphate acyltransferases AhyD4_RS00825 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS00865 SM00487 DEAD-like helicases superfamily AhyD4_RS00865 SM00490 helicase superfamily c-terminal domain AhyD4_RS00880 SM00919 Malic enzyme, NAD binding domain AhyD4_RS00880 SM01274 AhyD4_RS00880 AhyD4_RS00890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS00890 SM00387 Histidine kinase-like ATPases AhyD4_RS00890 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS00895 SM00448 cheY-homologous receiver domain AhyD4_RS00895 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS00915 SM00642 Alpha-amylase domain AhyD4_RS00960 SM01230 AhyD4_RS00960 AhyD4_RS00980 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01015 SM00341 Helicase and RNase D C-terminal AhyD4_RS01015 SM00487 DEAD-like helicases superfamily AhyD4_RS01015 SM00490 helicase superfamily c-terminal domain AhyD4_RS01015 SM00956 AhyD4_RS01015 AhyD4_RS01045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS01045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS01045 SM01358 AhyD4_RS01045 AhyD4_RS01050 SM00924 MgtE intracellular N domain AhyD4_RS01085 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01085 SM01086 C-terminal, D2-small domain, of ClpB protein AhyD4_RS01100 SM00836 DALR anticodon binding domain AhyD4_RS01100 SM01016 Arginyl tRNA synthetase N terminal dom AhyD4_RS01105 SM00464 Found in ATP-dependent protease La (LON) AhyD4_RS01150 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS01155 SM01038 Beta galactosidase small chain AhyD4_RS01165 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS01175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS01240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS01240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS01250 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS01260 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AhyD4_RS01260 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AhyD4_RS01300 SM00363 S4 RNA-binding domain AhyD4_RS01310 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01310 SM01086 C-terminal, D2-small domain, of ClpB protein AhyD4_RS01315 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS01325 SM00344 helix_turn_helix ASNC type AhyD4_RS01330 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS01340 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS01355 SM00387 Histidine kinase-like ATPases AhyD4_RS01355 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS01365 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01365 SM00448 cheY-homologous receiver domain AhyD4_RS01395 SM00448 cheY-homologous receiver domain AhyD4_RS01395 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS01400 SM00387 Histidine kinase-like ATPases AhyD4_RS01420 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AhyD4_RS01420 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AhyD4_RS01420 SM00493 AhyD4_RS01420 AhyD4_RS01435 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS01490 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AhyD4_RS01490 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AhyD4_RS01495 SM00649 Ribosomal protein L11/L12 AhyD4_RS01520 SM00663 RNA polymerase I subunit A N-terminus AhyD4_RS01525 SM01126 AhyD4_RS01525 AhyD4_RS01565 SM00838 Elongation factor G C-terminus AhyD4_RS01565 SM00889 Elongation factor G, domain IV AhyD4_RS01625 SM01120 AhyD4_RS01625 AhyD4_RS01640 SM00091 PAS domain AhyD4_RS01655 SM00822 AhyD4_RS01655 AhyD4_RS01665 SM00014 Acid phosphatase homologues AhyD4_RS01690 SM01060 AhyD4_RS01690 AhyD4_RS01700 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS01700 SM00871 Bacterial transcription activator, effector binding domain AhyD4_RS01715 SM00267 diguanylate cyclase AhyD4_RS01725 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS01750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS01750 SM00866 AhyD4_RS01750 AhyD4_RS01755 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS01810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS01810 SM00091 PAS domain AhyD4_RS01810 SM00267 diguanylate cyclase AhyD4_RS01835 SM00448 cheY-homologous receiver domain AhyD4_RS01835 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS01840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS01840 SM00387 Histidine kinase-like ATPases AhyD4_RS01840 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS01845 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS01845 SM00267 diguanylate cyclase AhyD4_RS01855 SM00357 Cold shock protein domain AhyD4_RS01870 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS01880 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS01900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS01900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS01930 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS02010 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS02015 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS02035 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS02110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AhyD4_RS02115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AhyD4_RS02165 SM00749 bacterial OsmY and nodulation domain AhyD4_RS02255 SM00842 Cell division protein FtsA AhyD4_RS02260 SM00864 Tubulin/FtsZ family, GTPase domain AhyD4_RS02260 SM00865 Tubulin/FtsZ family, C-terminal domain AhyD4_RS02275 SM00957 SecA DEAD-like domain AhyD4_RS02275 SM00958 SecA preprotein cross-linking domain AhyD4_RS02340 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS02340 SM00895 AhyD4_RS02340 AhyD4_RS02360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS02360 SM00267 diguanylate cyclase AhyD4_RS02370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS02375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS02375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS02410 SM00833 Cobalamin synthesis protein cobW C-terminal domain AhyD4_RS02430 SM00905 Dihydroneopterin aldolase AhyD4_RS02435 SM01207 AhyD4_RS02435 AhyD4_RS02480 SM00260 Two component signalling adaptor domain AhyD4_RS02480 SM00448 cheY-homologous receiver domain AhyD4_RS02515 SM00851 MGS-like domain AhyD4_RS02530 SM00870 AhyD4_RS02530 AhyD4_RS02545 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS02555 SM00642 Alpha-amylase domain AhyD4_RS02560 SM01266 AhyD4_RS02560 AhyD4_RS02565 SM00344 helix_turn_helix ASNC type AhyD4_RS02595 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS02665 SM01130 AhyD4_RS02665 AhyD4_RS02670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS02670 SM00267 diguanylate cyclase AhyD4_RS02710 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS02735 SM00478 endonuclease III AhyD4_RS02735 SM00525 AhyD4_RS02735 AhyD4_RS02745 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS02755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS02795 SM00450 Rhodanese Homology Domain AhyD4_RS02820 SM01118 AhyD4_RS02820 AhyD4_RS02890 SM00387 Histidine kinase-like ATPases AhyD4_RS02890 SM00433 TopoisomeraseII AhyD4_RS02895 SM00434 DNA Topoisomerase IV AhyD4_RS02930 SM00271 DnaJ molecular chaperone homology domain AhyD4_RS02960 SM00563 Phosphate acyltransferases AhyD4_RS02995 SM00986 Uracil DNA glycosylase superfamily AhyD4_RS02995 SM00987 UreE urease accessory protein, C-terminal domain AhyD4_RS03015 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03055 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS03070 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AhyD4_RS03070 SM00534 ATPase domain of DNA mismatch repair MUTS family AhyD4_RS03090 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AhyD4_RS03155 SM01091 Transporter associated domain AhyD4_RS03265 SM01133 AhyD4_RS03265 AhyD4_RS03270 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AhyD4_RS03285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS03285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS03285 SM00091 PAS domain AhyD4_RS03285 SM00267 diguanylate cyclase AhyD4_RS03310 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03325 SM00411 bacterial (prokaryotic) histone like domain AhyD4_RS03370 SM00487 DEAD-like helicases superfamily AhyD4_RS03370 SM00490 helicase superfamily c-terminal domain AhyD4_RS03385 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03405 SM01152 AhyD4_RS03405 AhyD4_RS03465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS03465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS03470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AhyD4_RS03475 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS03585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS03600 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS03610 SM00642 Alpha-amylase domain AhyD4_RS03615 SM00642 Alpha-amylase domain AhyD4_RS03635 SM00829 Enoylreductase AhyD4_RS03645 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS03660 SM00344 helix_turn_helix ASNC type AhyD4_RS03725 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS03825 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03830 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS03840 SM00244 prohibitin homologues AhyD4_RS03885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS03905 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03960 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS03990 SM00450 Rhodanese Homology Domain AhyD4_RS04035 SM00487 DEAD-like helicases superfamily AhyD4_RS04035 SM00490 helicase superfamily c-terminal domain AhyD4_RS04035 SM00847 Helicase associated domain (HA2) Add an annotation AhyD4_RS04065 SM00448 cheY-homologous receiver domain AhyD4_RS04065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS04075 SM00014 Acid phosphatase homologues AhyD4_RS04170 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04180 SM00448 cheY-homologous receiver domain AhyD4_RS04195 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AhyD4_RS04235 SM00327 von Willebrand factor (vWF) type A domain AhyD4_RS04240 SM00260 Two component signalling adaptor domain AhyD4_RS04240 SM00448 cheY-homologous receiver domain AhyD4_RS04250 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04265 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS04295 SM00450 Rhodanese Homology Domain AhyD4_RS04310 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04340 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS04340 SM00091 PAS domain AhyD4_RS04340 SM00267 diguanylate cyclase AhyD4_RS04375 SM00479 AhyD4_RS04375 AhyD4_RS04410 SM00357 Cold shock protein domain AhyD4_RS04420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS04420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS04460 SM00495 Chitin-binding domain type 3 AhyD4_RS04460 SM00636 AhyD4_RS04460 AhyD4_RS04465 SM00028 Tetratricopeptide repeats AhyD4_RS04515 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04520 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04545 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AhyD4_RS04575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS04585 SM01012 AhyD4_RS04585 AhyD4_RS04600 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04625 SM01057 Eukaryotic-type carbonic anhydrase AhyD4_RS04635 SM00477 DNA/RNA non-specific endonuclease AhyD4_RS04635 SM00892 DNA/RNA non-specific endonuclease AhyD4_RS04660 SM00563 Phosphate acyltransferases AhyD4_RS04720 SM00825 Beta-ketoacyl synthase AhyD4_RS04730 SM00822 AhyD4_RS04730 AhyD4_RS04735 SM00825 Beta-ketoacyl synthase AhyD4_RS04745 SM00852 Probable molybdopterin binding domain AhyD4_RS04770 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS04810 SM00937 AhyD4_RS04810 AhyD4_RS04815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS04815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS04825 SM00870 AhyD4_RS04825 AhyD4_RS04835 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS04865 SM01266 AhyD4_RS04865 AhyD4_RS04880 SM00829 Enoylreductase AhyD4_RS04905 SM00878 Biotin carboxylase C-terminal domain AhyD4_RS04930 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS04930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS04930 SM00091 PAS domain AhyD4_RS04930 SM00267 diguanylate cyclase AhyD4_RS05000 SM00020 Trypsin-like serine protease AhyD4_RS05025 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS05045 SM00861 Transketolase, pyrimidine binding domain AhyD4_RS05080 SM01103 AhyD4_RS05080 AhyD4_RS05090 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS05130 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS05150 SM01387 AhyD4_RS05150 AhyD4_RS05155 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS05155 SM00322 K homology RNA-binding domain AhyD4_RS05165 SM00267 diguanylate cyclase AhyD4_RS05195 SM00448 cheY-homologous receiver domain AhyD4_RS05195 SM00850 LytTr DNA-binding domain AhyD4_RS05205 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS05205 SM00448 cheY-homologous receiver domain AhyD4_RS05210 SM00387 Histidine kinase-like ATPases AhyD4_RS05210 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS05225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS05300 SM00422 helix_turn_helix, mercury resistance AhyD4_RS05330 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS05345 SM00936 Penicillin-binding protein 5, C-terminal domain AhyD4_RS05410 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS05410 SM01091 Transporter associated domain AhyD4_RS05425 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS05440 SM00357 Cold shock protein domain AhyD4_RS05445 SM00267 diguanylate cyclase AhyD4_RS05470 SM00267 diguanylate cyclase AhyD4_RS05495 SM00841 Elongation factor P, C-terminal AhyD4_RS05495 SM01185 AhyD4_RS05495 AhyD4_RS05505 SM01240 AhyD4_RS05505 AhyD4_RS05515 SM00387 Histidine kinase-like ATPases AhyD4_RS05515 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS05520 SM00448 cheY-homologous receiver domain AhyD4_RS05520 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS05530 SM00822 AhyD4_RS05530 AhyD4_RS05535 SM01236 AhyD4_RS05535 AhyD4_RS05595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS05595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS05635 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS05645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS05645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS05660 SM00842 Cell division protein FtsA AhyD4_RS05680 SM00965 Secretin and TonB N terminus short domain AhyD4_RS05745 SM01150 AhyD4_RS05745 AhyD4_RS05760 SM00890 Domain of unknown function AhyD4_RS05770 SM00642 Alpha-amylase domain AhyD4_RS05780 SM01022 AhyD4_RS05780 AhyD4_RS05785 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS05860 SM01400 AhyD4_RS05860 AhyD4_RS05885 SM00937 AhyD4_RS05885 AhyD4_RS05920 SM00986 Uracil DNA glycosylase superfamily AhyD4_RS05920 SM00987 UreE urease accessory protein, C-terminal domain AhyD4_RS05945 SM00460 Transglutaminase/protease-like homologues AhyD4_RS05970 SM00732 Likely ribonuclease with RNase H fold. AhyD4_RS05980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS06000 SM00731 SprT homologues. AhyD4_RS06010 SM00861 Transketolase, pyrimidine binding domain AhyD4_RS06020 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS06055 SM00363 S4 RNA-binding domain AhyD4_RS06065 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS06075 SM00788 Adenylosuccinate synthetase AhyD4_RS06120 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AhyD4_RS06120 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AhyD4_RS06120 SM00493 AhyD4_RS06120 AhyD4_RS06135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS06155 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06160 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06180 SM00091 PAS domain AhyD4_RS06180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS06180 SM00387 Histidine kinase-like ATPases AhyD4_RS06180 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS06180 SM00448 cheY-homologous receiver domain AhyD4_RS06230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS06230 SM00091 PAS domain AhyD4_RS06230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS06240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS06250 SM00852 Probable molybdopterin binding domain AhyD4_RS06260 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06275 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06275 SM00448 cheY-homologous receiver domain AhyD4_RS06280 SM00387 Histidine kinase-like ATPases AhyD4_RS06280 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS06325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS06340 SM00387 Histidine kinase-like ATPases AhyD4_RS06340 SM00448 cheY-homologous receiver domain AhyD4_RS06345 SM00919 Malic enzyme, NAD binding domain AhyD4_RS06345 SM01274 AhyD4_RS06345 AhyD4_RS06445 SM00267 diguanylate cyclase AhyD4_RS06470 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06505 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06510 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06525 SM00448 cheY-homologous receiver domain AhyD4_RS06525 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS06590 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06615 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS06615 SM00387 Histidine kinase-like ATPases AhyD4_RS06615 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS06615 SM00448 cheY-homologous receiver domain AhyD4_RS06615 SM00918 Ligated ion channel L-glutamate- and glycine-binding site AhyD4_RS06665 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS06685 SM00528 Domain in histone-like proteins of HNS family AhyD4_RS06710 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS06725 SM01131 AhyD4_RS06725 AhyD4_RS06755 SM00271 DnaJ molecular chaperone homology domain AhyD4_RS06775 SM00640 Glycosyl hydrolases family 32 AhyD4_RS06780 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS06800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AhyD4_RS06825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS06825 SM00091 PAS domain AhyD4_RS06825 SM00267 diguanylate cyclase AhyD4_RS06885 SM00028 Tetratricopeptide repeats AhyD4_RS06885 SM00448 cheY-homologous receiver domain AhyD4_RS06970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS06970 SM00387 Histidine kinase-like ATPases AhyD4_RS06970 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS06970 SM00448 cheY-homologous receiver domain AhyD4_RS06985 SM00448 cheY-homologous receiver domain AhyD4_RS06985 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS07075 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS07155 SM00247 Beta/gamma crystallins AhyD4_RS07205 SM00481 DNA polymerase alpha chain like domain AhyD4_RS07225 SM00363 S4 RNA-binding domain AhyD4_RS07370 SM00487 DEAD-like helicases superfamily AhyD4_RS07370 SM00490 helicase superfamily c-terminal domain AhyD4_RS07395 SM00861 Transketolase, pyrimidine binding domain AhyD4_RS07405 SM00357 Cold shock protein domain AhyD4_RS07440 SM00420 helix_turn_helix, Deoxyribose operon repressor AhyD4_RS07440 SM01134 AhyD4_RS07440 AhyD4_RS07465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS07470 SM00363 S4 RNA-binding domain AhyD4_RS07500 SM00858 AhyD4_RS07500 AhyD4_RS07505 SM00260 Two component signalling adaptor domain AhyD4_RS07505 SM00448 cheY-homologous receiver domain AhyD4_RS07510 SM00138 Methyltransferase, chemotaxis proteins AhyD4_RS07555 SM00047 Lysozyme subfamily 2 AhyD4_RS07570 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS07570 SM00924 MgtE intracellular N domain AhyD4_RS07595 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS07600 SM00091 PAS domain AhyD4_RS07600 SM00387 Histidine kinase-like ATPases AhyD4_RS07600 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS07605 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS07605 SM00448 cheY-homologous receiver domain AhyD4_RS07670 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS07680 SM01091 Transporter associated domain AhyD4_RS07710 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS07720 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS07720 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AhyD4_RS07725 SM00267 diguanylate cyclase AhyD4_RS07735 SM00387 Histidine kinase-like ATPases AhyD4_RS07740 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS07740 SM00448 cheY-homologous receiver domain AhyD4_RS07765 SM00098 Alkaline phosphatase homologues AhyD4_RS07770 SM00098 Alkaline phosphatase homologues AhyD4_RS07795 SM00491 AhyD4_RS07795 AhyD4_RS07875 SM00873 B3/4 domain AhyD4_RS07880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS07885 SM01130 AhyD4_RS07885 AhyD4_RS07895 SM00344 helix_turn_helix ASNC type AhyD4_RS07925 SM00528 Domain in histone-like proteins of HNS family AhyD4_RS07960 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS07965 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS07985 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS07985 SM00448 cheY-homologous receiver domain AhyD4_RS07990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AhyD4_RS07990 SM00465 GIY-YIG type nucleases (URI domain) AhyD4_RS08075 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08210 SM00840 AhyD4_RS08210 AhyD4_RS08225 SM00267 diguanylate cyclase AhyD4_RS08230 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS08235 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS08265 SM00899 AhyD4_RS08265 AhyD4_RS08290 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08300 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS08310 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08360 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AhyD4_RS08365 SM00851 MGS-like domain AhyD4_RS08365 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AhyD4_RS08370 SM00917 LeuA allosteric (dimerisation) domain AhyD4_RS08390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS08405 SM00487 DEAD-like helicases superfamily AhyD4_RS08405 SM00490 helicase superfamily c-terminal domain AhyD4_RS08415 SM01351 AhyD4_RS08415 AhyD4_RS08430 SM00422 helix_turn_helix, mercury resistance AhyD4_RS08445 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS08455 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08470 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS08475 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08495 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS08495 SM00267 diguanylate cyclase AhyD4_RS08510 SM00327 von Willebrand factor (vWF) type A domain AhyD4_RS08545 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS08550 SM01217 AhyD4_RS08550 AhyD4_RS08575 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS08575 SM00871 Bacterial transcription activator, effector binding domain AhyD4_RS08590 SM00014 Acid phosphatase homologues AhyD4_RS08600 SM00859 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS08680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS08685 SM00267 diguanylate cyclase AhyD4_RS08760 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS08760 SM01091 Transporter associated domain AhyD4_RS08785 SM00487 DEAD-like helicases superfamily AhyD4_RS08785 SM00490 helicase superfamily c-terminal domain AhyD4_RS08795 SM00479 AhyD4_RS08795 AhyD4_RS08800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS08815 SM00478 endonuclease III AhyD4_RS08815 SM00525 AhyD4_RS08815 AhyD4_RS08825 SM00900 AhyD4_RS08825 AhyD4_RS08860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS08860 SM00091 PAS domain AhyD4_RS08860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS08895 SM00487 DEAD-like helicases superfamily AhyD4_RS08895 SM00490 helicase superfamily c-terminal domain AhyD4_RS08915 SM00448 cheY-homologous receiver domain AhyD4_RS08915 SM00850 LytTr DNA-binding domain AhyD4_RS08920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS08925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS08960 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08970 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS08980 SM01005 Alanine racemase, C-terminal domain AhyD4_RS09015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS09015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS09255 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09375 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS09380 SM00873 B3/4 domain AhyD4_RS09385 SM01005 Alanine racemase, C-terminal domain AhyD4_RS09390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS09390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS09395 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS09395 SM00448 cheY-homologous receiver domain AhyD4_RS09400 SM00448 cheY-homologous receiver domain AhyD4_RS09405 SM00138 Methyltransferase, chemotaxis proteins AhyD4_RS09410 SM00260 Two component signalling adaptor domain AhyD4_RS09415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS09420 SM00073 Histidine Phosphotransfer domain AhyD4_RS09420 SM00260 Two component signalling adaptor domain AhyD4_RS09420 SM00387 Histidine kinase-like ATPases AhyD4_RS09420 SM01231 AhyD4_RS09420 AhyD4_RS09430 SM00448 cheY-homologous receiver domain AhyD4_RS09480 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09485 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09580 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS09595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS09595 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09605 SM00493 AhyD4_RS09605 AhyD4_RS09610 SM00387 Histidine kinase-like ATPases AhyD4_RS09680 SM00823 Phosphopantetheine attachment site AhyD4_RS09685 SM00822 AhyD4_RS09685 AhyD4_RS09690 SM00823 Phosphopantetheine attachment site AhyD4_RS09710 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09755 SM00893 Electron transfer flavoprotein domain AhyD4_RS09760 SM00893 Electron transfer flavoprotein domain AhyD4_RS09780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS09780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS09785 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS09820 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS09820 SM01240 AhyD4_RS09820 AhyD4_RS09880 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS09890 SM00369 Leucine-rich repeats, typical (most populated) subfamily AhyD4_RS09905 SM00855 Phosphoglycerate mutase family AhyD4_RS09930 SM00487 DEAD-like helicases superfamily AhyD4_RS09930 SM00490 helicase superfamily c-terminal domain AhyD4_RS09930 SM00982 AhyD4_RS09930 AhyD4_RS09930 SM01058 CarD-like/TRCF domain AhyD4_RS09945 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS09975 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09975 SM00994 ClpX C4-type zinc finger AhyD4_RS09975 SM01086 C-terminal, D2-small domain, of ClpB protein AhyD4_RS09980 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS09980 SM00464 Found in ATP-dependent protease La (LON) AhyD4_RS09995 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS10010 SM00479 AhyD4_RS10010 AhyD4_RS10015 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS10015 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS10080 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS10085 SM00422 helix_turn_helix, mercury resistance AhyD4_RS10095 SM00878 Biotin carboxylase C-terminal domain AhyD4_RS10095 SM01209 AhyD4_RS10095 AhyD4_RS10140 SM00822 AhyD4_RS10140 AhyD4_RS10165 SM00885 D5 N terminal like AhyD4_RS10175 SM00073 Histidine Phosphotransfer domain AhyD4_RS10195 SM00857 Resolvase, N terminal domain AhyD4_RS10250 SM00267 diguanylate cyclase AhyD4_RS10265 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS10265 SM00267 diguanylate cyclase AhyD4_RS10275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS10280 SM00822 AhyD4_RS10280 AhyD4_RS10290 SM00518 AP endonuclease family 2 AhyD4_RS10320 SM00090 RIO-like kinase AhyD4_RS10330 SM00267 diguanylate cyclase AhyD4_RS10340 SM00486 DNA polymerase type-B family AhyD4_RS10420 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS10500 SM00422 helix_turn_helix, mercury resistance AhyD4_RS10510 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS10540 SM00028 Tetratricopeptide repeats AhyD4_RS10545 SM00327 von Willebrand factor (vWF) type A domain AhyD4_RS10575 SM01322 AhyD4_RS10575 AhyD4_RS10600 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS10660 SM01092 CO dehydrogenase flavoprotein C-terminal domain AhyD4_RS10665 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AhyD4_RS10685 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AhyD4_RS10690 SM01092 CO dehydrogenase flavoprotein C-terminal domain AhyD4_RS10700 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AhyD4_RS10735 SM00073 Histidine Phosphotransfer domain AhyD4_RS10735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS10735 SM00091 PAS domain AhyD4_RS10735 SM00387 Histidine kinase-like ATPases AhyD4_RS10735 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS10735 SM00448 cheY-homologous receiver domain AhyD4_RS10740 SM00091 PAS domain AhyD4_RS10745 SM00448 cheY-homologous receiver domain AhyD4_RS10745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS10785 SM00491 AhyD4_RS10785 AhyD4_RS10810 SM00341 Helicase and RNase D C-terminal AhyD4_RS10810 SM00474 3'-5' exonuclease AhyD4_RS10815 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS10920 SM00857 Resolvase, N terminal domain AhyD4_RS10955 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS11015 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS11090 SM01060 AhyD4_RS11090 AhyD4_RS11095 SM00248 ankyrin repeats AhyD4_RS11160 SM00528 Domain in histone-like proteins of HNS family AhyD4_RS11310 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS11315 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS11320 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS11320 SM00487 DEAD-like helicases superfamily AhyD4_RS11320 SM00490 helicase superfamily c-terminal domain AhyD4_RS11320 SM00847 Helicase associated domain (HA2) Add an annotation AhyD4_RS11335 SM00387 Histidine kinase-like ATPases AhyD4_RS11335 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS11335 SM00448 cheY-homologous receiver domain AhyD4_RS11340 SM00448 cheY-homologous receiver domain AhyD4_RS11340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS11345 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS11350 SM00450 Rhodanese Homology Domain AhyD4_RS11375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AhyD4_RS11380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS11420 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS11425 SM00363 S4 RNA-binding domain AhyD4_RS11475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AhyD4_RS11480 SM00822 AhyD4_RS11480 AhyD4_RS11490 SM00825 Beta-ketoacyl synthase AhyD4_RS11510 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS11600 SM00822 AhyD4_RS11600 AhyD4_RS11635 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS11645 SM00981 AhyD4_RS11645 AhyD4_RS11675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AhyD4_RS11675 SM00245 tail specific protease AhyD4_RS11680 SM00945 ProQ/FINO family AhyD4_RS11735 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS11735 SM00419 helix_turn_helix, cAMP Regulatory protein AhyD4_RS11770 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS11790 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS11795 SM00267 diguanylate cyclase AhyD4_RS11820 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS11820 SM00387 Histidine kinase-like ATPases AhyD4_RS11820 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS11820 SM00448 cheY-homologous receiver domain AhyD4_RS11825 SM00411 bacterial (prokaryotic) histone like domain AhyD4_RS11830 SM00873 B3/4 domain AhyD4_RS11830 SM00874 tRNA synthetase B5 domain AhyD4_RS11830 SM00896 Ferredoxin-fold anticodon binding domain AhyD4_RS11855 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AhyD4_RS11860 SM00671 Sel1-like repeats. AhyD4_RS11870 SM00434 DNA Topoisomerase IV AhyD4_RS11900 SM00925 MltA specific insert domain AhyD4_RS11940 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS11965 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS11980 SM00953 AhyD4_RS11980 AhyD4_RS11990 SM00487 DEAD-like helicases superfamily AhyD4_RS11990 SM00490 helicase superfamily c-terminal domain AhyD4_RS11995 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS12010 SM00463 Small MutS-related domain AhyD4_RS12020 SM00091 PAS domain AhyD4_RS12020 SM00267 diguanylate cyclase AhyD4_RS12025 SM00855 Phosphoglycerate mutase family AhyD4_RS12040 SM00495 Chitin-binding domain type 3 AhyD4_RS12050 SM00782 PhnA Zinc-Ribbon AhyD4_RS12185 SM00642 Alpha-amylase domain AhyD4_RS12200 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS12220 SM01144 AhyD4_RS12220 AhyD4_RS12235 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AhyD4_RS12245 SM00487 DEAD-like helicases superfamily AhyD4_RS12245 SM00490 helicase superfamily c-terminal domain AhyD4_RS12270 SM01118 AhyD4_RS12270 AhyD4_RS12335 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS12340 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS12345 SM00387 Histidine kinase-like ATPases AhyD4_RS12345 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS12345 SM00448 cheY-homologous receiver domain AhyD4_RS12405 SM00487 DEAD-like helicases superfamily AhyD4_RS12405 SM00490 helicase superfamily c-terminal domain AhyD4_RS12410 SM00763 PrkA AAA domain AhyD4_RS12425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS12450 SM00487 DEAD-like helicases superfamily AhyD4_RS12450 SM00490 helicase superfamily c-terminal domain AhyD4_RS12465 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS12485 SM00448 cheY-homologous receiver domain AhyD4_RS12490 SM00091 PAS domain AhyD4_RS12490 SM00387 Histidine kinase-like ATPases AhyD4_RS12500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS12500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS12500 SM01049 AhyD4_RS12500 AhyD4_RS12605 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS12635 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS12635 SM00871 Bacterial transcription activator, effector binding domain AhyD4_RS12640 SM00822 AhyD4_RS12640 AhyD4_RS12670 SM00859 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS12710 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS12710 SM00866 AhyD4_RS12710 AhyD4_RS12720 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS12745 SM00881 CoA binding domain AhyD4_RS12760 SM00861 Transketolase, pyrimidine binding domain AhyD4_RS12800 SM00825 Beta-ketoacyl synthase AhyD4_RS12865 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS12875 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS12890 SM01007 Class II Aldolase and Adducin N-terminal domain AhyD4_RS12955 SM00267 diguanylate cyclase AhyD4_RS12955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS12965 SM00091 PAS domain AhyD4_RS12965 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13010 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13030 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13035 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13065 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13075 SM00843 AhyD4_RS13075 AhyD4_RS13080 SM00344 helix_turn_helix ASNC type AhyD4_RS13090 SM00267 diguanylate cyclase AhyD4_RS13090 SM00448 cheY-homologous receiver domain AhyD4_RS13110 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS13115 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13115 SM01086 C-terminal, D2-small domain, of ClpB protein AhyD4_RS13125 SM00357 Cold shock protein domain AhyD4_RS13200 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13205 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS13205 SM01086 C-terminal, D2-small domain, of ClpB protein AhyD4_RS13255 SM00671 Sel1-like repeats. AhyD4_RS13300 SM01154 AhyD4_RS13300 AhyD4_RS13315 SM00528 Domain in histone-like proteins of HNS family AhyD4_RS13340 SM01144 AhyD4_RS13340 AhyD4_RS13350 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AhyD4_RS13355 SM00028 Tetratricopeptide repeats AhyD4_RS13365 SM00411 bacterial (prokaryotic) histone like domain AhyD4_RS13370 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS13415 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS13415 SM00267 diguanylate cyclase AhyD4_RS13430 SM00448 cheY-homologous receiver domain AhyD4_RS13435 SM00091 PAS domain AhyD4_RS13460 SM00360 RNA recognition motif AhyD4_RS13525 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AhyD4_RS13530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS13530 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AhyD4_RS13570 SM01126 AhyD4_RS13570 AhyD4_RS13575 SM01211 AhyD4_RS13575 AhyD4_RS13580 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS13595 SM00564 beta-propeller repeat AhyD4_RS13615 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS13620 SM00028 Tetratricopeptide repeats AhyD4_RS13630 SM00562 AhyD4_RS13630 AhyD4_RS13655 SM00271 DnaJ molecular chaperone homology domain AhyD4_RS13705 SM00028 Tetratricopeptide repeats AhyD4_RS13710 SM00450 Rhodanese Homology Domain AhyD4_RS13725 SM01323 AhyD4_RS13725 AhyD4_RS13740 SM00116 Domain in cystathionine beta-synthase and other proteins. AhyD4_RS13780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AhyD4_RS13845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS13845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS13905 SM00858 AhyD4_RS13905 AhyD4_RS13975 SM00981 AhyD4_RS13975 AhyD4_RS13990 SM01359 AhyD4_RS13990 AhyD4_RS13990 SM01360 AhyD4_RS13990 AhyD4_RS14025 SM00450 Rhodanese Homology Domain AhyD4_RS14030 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS14030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS14030 SM00091 PAS domain AhyD4_RS14030 SM00267 diguanylate cyclase AhyD4_RS14055 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS14055 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AhyD4_RS14060 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS14130 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS14205 SM00830 Chorismate mutase type II AhyD4_RS14225 SM00420 helix_turn_helix, Deoxyribose operon repressor AhyD4_RS14225 SM01134 AhyD4_RS14225 AhyD4_RS14290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS14315 SM00871 Bacterial transcription activator, effector binding domain AhyD4_RS14340 SM00363 S4 RNA-binding domain AhyD4_RS14345 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AhyD4_RS14365 SM00487 DEAD-like helicases superfamily AhyD4_RS14365 SM00490 helicase superfamily c-terminal domain AhyD4_RS14370 SM00855 Phosphoglycerate mutase family AhyD4_RS14395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS14395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS14420 SM00563 Phosphate acyltransferases AhyD4_RS14430 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AhyD4_RS14440 SM00867 YceI-like domain AhyD4_RS14460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS14460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS14470 SM00852 Probable molybdopterin binding domain AhyD4_RS14485 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS14515 SM00852 Probable molybdopterin binding domain AhyD4_RS14540 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS14555 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS14560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS14560 SM00387 Histidine kinase-like ATPases AhyD4_RS14565 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS14565 SM00448 cheY-homologous receiver domain AhyD4_RS14570 SM00464 Found in ATP-dependent protease La (LON) AhyD4_RS14575 SM00387 Histidine kinase-like ATPases AhyD4_RS14575 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS14575 SM00448 cheY-homologous receiver domain AhyD4_RS14580 SM00897 FIST N domain AhyD4_RS14580 SM01204 AhyD4_RS14580 AhyD4_RS14590 SM00073 Histidine Phosphotransfer domain AhyD4_RS14610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS14620 SM00479 AhyD4_RS14620 AhyD4_RS14635 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS14640 SM00257 Lysin motif AhyD4_RS14665 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS14675 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS14675 SM00267 diguanylate cyclase AhyD4_RS14750 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS14765 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS14820 SM01081 Putative carbohydrate binding domain AhyD4_RS14900 SM00458 Ricin-type beta-trefoil AhyD4_RS14975 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS14985 SM00890 Domain of unknown function AhyD4_RS15000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS15025 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS15025 SM00876 Biotin and Thiamin Synthesis associated domain AhyD4_RS15035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS15095 SM01091 Transporter associated domain AhyD4_RS15120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS15120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS15190 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15210 SM00858 AhyD4_RS15210 AhyD4_RS15240 SM00859 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS15340 SM00959 Rho termination factor, N-terminal domain AhyD4_RS15490 SM00487 DEAD-like helicases superfamily AhyD4_RS15545 SM01329 AhyD4_RS15545 AhyD4_RS15550 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS15585 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS15665 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AhyD4_RS15765 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15775 SM00260 Two component signalling adaptor domain AhyD4_RS15780 SM00260 Two component signalling adaptor domain AhyD4_RS15800 SM00448 cheY-homologous receiver domain AhyD4_RS15805 SM00073 Histidine Phosphotransfer domain AhyD4_RS15805 SM00260 Two component signalling adaptor domain AhyD4_RS15805 SM00387 Histidine kinase-like ATPases AhyD4_RS15805 SM01231 AhyD4_RS15805 AhyD4_RS15815 SM00448 cheY-homologous receiver domain AhyD4_RS15830 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15830 SM00962 SRP54-type protein, GTPase domain AhyD4_RS15890 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS15925 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS15950 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15960 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS15965 SM00448 cheY-homologous receiver domain AhyD4_RS15965 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS15970 SM00387 Histidine kinase-like ATPases AhyD4_RS16010 SM00481 DNA polymerase alpha chain like domain AhyD4_RS16040 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS16050 SM00877 AhyD4_RS16050 AhyD4_RS16055 SM00877 AhyD4_RS16055 AhyD4_RS16060 SM00877 AhyD4_RS16060 AhyD4_RS16090 SM00877 AhyD4_RS16090 AhyD4_RS16165 SM01130 AhyD4_RS16165 AhyD4_RS16175 SM01134 AhyD4_RS16175 AhyD4_RS16195 SM01007 Class II Aldolase and Adducin N-terminal domain AhyD4_RS16210 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS16290 SM00155 Phospholipase D. Active site motifs. AhyD4_RS16310 SM00642 Alpha-amylase domain AhyD4_RS16355 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS16375 SM00267 diguanylate cyclase AhyD4_RS16390 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS16415 SM00919 Malic enzyme, NAD binding domain AhyD4_RS16415 SM01274 AhyD4_RS16415 AhyD4_RS16420 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS16435 SM00267 diguanylate cyclase AhyD4_RS16495 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS16530 SM00387 Histidine kinase-like ATPases AhyD4_RS16530 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS16535 SM00448 cheY-homologous receiver domain AhyD4_RS16535 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS16555 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS16565 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS16575 SM00448 cheY-homologous receiver domain AhyD4_RS16580 SM00387 Histidine kinase-like ATPases AhyD4_RS16585 SM00919 Malic enzyme, NAD binding domain AhyD4_RS16585 SM01274 AhyD4_RS16585 AhyD4_RS16595 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS16610 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS16640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AhyD4_RS16640 SM00292 breast cancer carboxy-terminal domain AhyD4_RS16640 SM00532 Ligase N family AhyD4_RS16645 SM00771 ZipA, C-terminal domain (FtsZ-binding) AhyD4_RS16680 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS16705 SM00642 Alpha-amylase domain AhyD4_RS16715 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS16715 SM00448 cheY-homologous receiver domain AhyD4_RS16740 SM00267 diguanylate cyclase AhyD4_RS16745 SM00977 TilS substrate C-terminal domain AhyD4_RS16760 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS16780 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS16815 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS16825 SM00481 DNA polymerase alpha chain like domain AhyD4_RS16855 SM00935 Outer membrane protein (OmpH-like) AhyD4_RS16865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AhyD4_RS16910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS16990 SM00028 Tetratricopeptide repeats AhyD4_RS16995 SM00267 diguanylate cyclase AhyD4_RS17005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AhyD4_RS17005 SM00475 5'-3' exonuclease AhyD4_RS17010 SM01329 AhyD4_RS17010 AhyD4_RS17040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS17040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS17080 SM00900 AhyD4_RS17080 AhyD4_RS17185 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS17270 SM00422 helix_turn_helix, mercury resistance AhyD4_RS17305 SM00830 Chorismate mutase type II AhyD4_RS17345 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS17410 SM00487 DEAD-like helicases superfamily AhyD4_RS17410 SM00490 helicase superfamily c-terminal domain AhyD4_RS17430 SM00487 DEAD-like helicases superfamily AhyD4_RS17430 SM00490 helicase superfamily c-terminal domain AhyD4_RS17435 SM00487 DEAD-like helicases superfamily AhyD4_RS17455 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS17495 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS17495 SM00419 helix_turn_helix, cAMP Regulatory protein AhyD4_RS17510 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS17560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS17560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS17585 SM00463 Small MutS-related domain AhyD4_RS17630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS17635 SM00448 cheY-homologous receiver domain AhyD4_RS17645 SM00073 Histidine Phosphotransfer domain AhyD4_RS17645 SM00260 Two component signalling adaptor domain AhyD4_RS17645 SM00387 Histidine kinase-like ATPases AhyD4_RS17645 SM01231 AhyD4_RS17645 AhyD4_RS17650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS17650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS17655 SM00260 Two component signalling adaptor domain AhyD4_RS17660 SM00091 PAS domain AhyD4_RS17660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS17660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS17665 SM00138 Methyltransferase, chemotaxis proteins AhyD4_RS17675 SM00448 cheY-homologous receiver domain AhyD4_RS17710 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS17725 SM01005 Alanine racemase, C-terminal domain AhyD4_RS17730 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS17735 SM00978 AhyD4_RS17735 AhyD4_RS17740 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS17765 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS17765 SM00448 cheY-homologous receiver domain AhyD4_RS17775 SM00320 WD40 repeats AhyD4_RS17800 SM00260 Two component signalling adaptor domain AhyD4_RS17800 SM00448 cheY-homologous receiver domain AhyD4_RS17810 SM00267 diguanylate cyclase AhyD4_RS17820 SM00984 UDP binding domain AhyD4_RS17880 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS17880 SM00419 helix_turn_helix, cAMP Regulatory protein AhyD4_RS17890 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AhyD4_RS17890 SM00495 Chitin-binding domain type 3 AhyD4_RS17900 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AhyD4_RS17900 SM00495 Chitin-binding domain type 3 AhyD4_RS17900 SM00636 AhyD4_RS17900 AhyD4_RS17905 SM00387 Histidine kinase-like ATPases AhyD4_RS17905 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS17905 SM00448 cheY-homologous receiver domain AhyD4_RS17915 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS17965 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS17985 SM01133 AhyD4_RS17985 AhyD4_RS18140 SM00507 HNH nucleases AhyD4_RS18180 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS18190 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS18265 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS18310 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS18325 SM00271 DnaJ molecular chaperone homology domain AhyD4_RS18355 SM00650 Ribosomal RNA adenine dimethylases AhyD4_RS18370 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS18380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS18430 SM00244 prohibitin homologues AhyD4_RS18435 SM00244 prohibitin homologues AhyD4_RS18455 SM00853 MutL C terminal dimerisation domain AhyD4_RS18455 SM01340 AhyD4_RS18455 AhyD4_RS18460 SM00257 Lysin motif AhyD4_RS18460 SM00646 AhyD4_RS18460 AhyD4_RS18495 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS18495 SM00930 AhyD4_RS18495 AhyD4_RS18510 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AhyD4_RS18515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS18515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS18520 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS18520 SM00448 cheY-homologous receiver domain AhyD4_RS18525 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS18525 SM00073 Histidine Phosphotransfer domain AhyD4_RS18525 SM00091 PAS domain AhyD4_RS18525 SM00387 Histidine kinase-like ATPases AhyD4_RS18525 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS18525 SM00448 cheY-homologous receiver domain AhyD4_RS18535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS18540 SM00073 Histidine Phosphotransfer domain AhyD4_RS18540 SM00091 PAS domain AhyD4_RS18540 SM00387 Histidine kinase-like ATPases AhyD4_RS18540 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS18540 SM00448 cheY-homologous receiver domain AhyD4_RS18585 SM01130 AhyD4_RS18585 AhyD4_RS18635 SM00014 Acid phosphatase homologues AhyD4_RS18645 SM00917 LeuA allosteric (dimerisation) domain AhyD4_RS18650 SM01329 AhyD4_RS18650 AhyD4_RS18685 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS18690 SM00670 Large family of predicted nucleotide-binding domains AhyD4_RS18730 SM00487 DEAD-like helicases superfamily AhyD4_RS18730 SM00490 helicase superfamily c-terminal domain AhyD4_RS18745 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS18745 SM00267 diguanylate cyclase AhyD4_RS18760 SM00883 Chaperonin 10 Kd subunit AhyD4_RS18835 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS18850 SM00422 helix_turn_helix, mercury resistance AhyD4_RS18855 SM00798 AICARFT/IMPCHase bienzyme AhyD4_RS18855 SM00851 MGS-like domain AhyD4_RS18860 SM01209 AhyD4_RS18860 AhyD4_RS18860 SM01210 AhyD4_RS18860 AhyD4_RS18875 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AhyD4_RS18875 SM00632 AhyD4_RS18875 AhyD4_RS18875 SM00642 Alpha-amylase domain AhyD4_RS18880 SM01126 AhyD4_RS18880 AhyD4_RS18895 SM00400 zinc finger AhyD4_RS18895 SM00493 AhyD4_RS18895 AhyD4_RS18895 SM00766 DNA primase DnaG DnaB-binding AhyD4_RS18915 SM00257 Lysin motif AhyD4_RS18955 SM01192 AhyD4_RS18955 AhyD4_RS18955 SM01193 AhyD4_RS18955 AhyD4_RS18970 SM00954 Region found in RelA / SpoT proteins AhyD4_RS18980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS18980 SM00387 Histidine kinase-like ATPases AhyD4_RS18980 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS18980 SM00448 cheY-homologous receiver domain AhyD4_RS18990 SM00644 AhyD4_RS18990 AhyD4_RS18995 SM00420 helix_turn_helix, Deoxyribose operon repressor AhyD4_RS18995 SM01134 AhyD4_RS18995 AhyD4_RS19060 SM00358 Double-stranded RNA binding motif AhyD4_RS19060 SM00535 Ribonuclease III family AhyD4_RS19160 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS19185 SM00287 Bacterial SH3 domain homologues AhyD4_RS19195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS19195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS19245 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19250 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS19255 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19265 SM00448 cheY-homologous receiver domain AhyD4_RS19265 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS19270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS19270 SM00387 Histidine kinase-like ATPases AhyD4_RS19270 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS19360 SM00487 DEAD-like helicases superfamily AhyD4_RS19360 SM00490 helicase superfamily c-terminal domain AhyD4_RS19370 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS19410 SM00347 helix_turn_helix multiple antibiotic resistance protein AhyD4_RS19425 SM00028 Tetratricopeptide repeats AhyD4_RS19425 SM00267 diguanylate cyclase AhyD4_RS19430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS19430 SM00091 PAS domain AhyD4_RS19430 SM00267 diguanylate cyclase AhyD4_RS19435 SM00327 von Willebrand factor (vWF) type A domain AhyD4_RS19440 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19485 SM00829 Enoylreductase AhyD4_RS19550 SM00967 RNA 2'-O ribose methyltransferase substrate binding AhyD4_RS19555 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS19555 SM00357 Cold shock protein domain AhyD4_RS19555 SM00955 AhyD4_RS19555 AhyD4_RS19560 SM00267 diguanylate cyclase AhyD4_RS19575 SM00938 Nitrogen regulatory protein P-II AhyD4_RS19660 SM00904 Riboflavin kinase AhyD4_RS19675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AhyD4_RS19705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS19715 SM00927 DNA mismatch repair enzyme MutH AhyD4_RS19745 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19745 SM00962 SRP54-type protein, GTPase domain AhyD4_RS19745 SM00963 SRP54-type protein, helical bundle domain AhyD4_RS19755 SM01091 Transporter associated domain AhyD4_RS19770 SM00671 Sel1-like repeats. AhyD4_RS19790 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS19790 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AhyD4_RS19795 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19810 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS19825 SM00938 Nitrogen regulatory protein P-II AhyD4_RS19890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS19910 SM00487 DEAD-like helicases superfamily AhyD4_RS19910 SM00490 helicase superfamily c-terminal domain AhyD4_RS19990 SM00245 tail specific protease AhyD4_RS20020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AhyD4_RS20020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS20020 SM01049 AhyD4_RS20020 AhyD4_RS20035 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS20065 SM01266 AhyD4_RS20065 AhyD4_RS20110 SM00859 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS20145 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS20180 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS20230 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS20245 SM00363 S4 RNA-binding domain AhyD4_RS20260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS20260 SM00895 AhyD4_RS20260 AhyD4_RS20295 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS20310 SM00357 Cold shock protein domain AhyD4_RS20310 SM00955 AhyD4_RS20310 AhyD4_RS20390 SM00487 DEAD-like helicases superfamily AhyD4_RS20390 SM00490 helicase superfamily c-terminal domain AhyD4_RS20440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AhyD4_RS20450 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS20590 SM00642 Alpha-amylase domain AhyD4_RS20610 SM00344 helix_turn_helix ASNC type AhyD4_RS20630 SM00852 Probable molybdopterin binding domain AhyD4_RS20645 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS20675 SM00100 Cyclic nucleotide-monophosphate binding domain AhyD4_RS20710 SM01219 AhyD4_RS20710 AhyD4_RS20820 SM00267 diguanylate cyclase AhyD4_RS20845 SM00876 Biotin and Thiamin Synthesis associated domain AhyD4_RS20875 SM00999 Aerolysin toxin AhyD4_RS20890 SM00448 cheY-homologous receiver domain AhyD4_RS20890 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS20895 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS20910 SM01018 B12 binding domain AhyD4_RS20990 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS21035 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS21040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS21040 SM00091 PAS domain AhyD4_RS21050 SM00331 Sigma factor PP2C-like phosphatases AhyD4_RS21050 SM00387 Histidine kinase-like ATPases AhyD4_RS21055 SM00387 Histidine kinase-like ATPases AhyD4_RS21055 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS21055 SM00448 cheY-homologous receiver domain AhyD4_RS21060 SM00448 cheY-homologous receiver domain AhyD4_RS21060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AhyD4_RS21120 SM00886 Stress responsive A/B Barrel Domain AhyD4_RS21130 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS21200 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS21215 SM00965 Secretin and TonB N terminus short domain AhyD4_RS21245 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS21245 SM00267 diguanylate cyclase AhyD4_RS21250 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS21280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS21280 SM00866 AhyD4_RS21280 AhyD4_RS21285 SM00947 Carbonic anhydrase AhyD4_RS21300 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS21305 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS21305 SM00962 SRP54-type protein, GTPase domain AhyD4_RS21305 SM00963 SRP54-type protein, helical bundle domain AhyD4_RS21335 SM00155 Phospholipase D. Active site motifs. AhyD4_RS21340 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS21425 SM00822 AhyD4_RS21425 AhyD4_RS21485 SM00662 RNA polymerases D AhyD4_RS21490 SM00363 S4 RNA-binding domain AhyD4_RS21490 SM01390 AhyD4_RS21490 AhyD4_RS21550 SM01374 AhyD4_RS21550 AhyD4_RS21570 SM00322 K homology RNA-binding domain AhyD4_RS21585 SM01382 AhyD4_RS21585 AhyD4_RS21585 SM01383 AhyD4_RS21585 AhyD4_RS21605 SM01403 AhyD4_RS21605 AhyD4_RS21615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS21615 SM00387 Histidine kinase-like ATPases AhyD4_RS21615 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS21620 SM00448 cheY-homologous receiver domain AhyD4_RS21620 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS21630 SM00316 Ribosomal protein S1-like RNA-binding domain AhyD4_RS21630 SM00732 Likely ribonuclease with RNase H fold. AhyD4_RS21675 SM00450 Rhodanese Homology Domain AhyD4_RS21695 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS21720 SM00155 Phospholipase D. Active site motifs. AhyD4_RS21725 SM00487 DEAD-like helicases superfamily AhyD4_RS21725 SM00490 helicase superfamily c-terminal domain AhyD4_RS21760 SM01230 AhyD4_RS21760 AhyD4_RS21770 SM00091 PAS domain AhyD4_RS21770 SM00387 Histidine kinase-like ATPases AhyD4_RS21770 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS21775 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS21775 SM00448 cheY-homologous receiver domain AhyD4_RS21785 SM00729 Elongator protein 3, MiaB family, Radical SAM AhyD4_RS21835 SM01001 AIR carboxylase AhyD4_RS21855 SM00257 Lysin motif AhyD4_RS21910 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AhyD4_RS21910 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AhyD4_RS21930 SM00530 Helix-turn-helix XRE-family like proteins AhyD4_RS21950 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS21960 SM00831 Cation transporter/ATPase, N-terminus AhyD4_RS22020 SM01321 AhyD4_RS22020 AhyD4_RS22035 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22055 SM00829 Enoylreductase AhyD4_RS22100 SM01038 Beta galactosidase small chain AhyD4_RS22105 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS22145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AhyD4_RS22145 SM00474 3'-5' exonuclease AhyD4_RS22145 SM00475 5'-3' exonuclease AhyD4_RS22145 SM00482 DNA polymerase A domain AhyD4_RS22165 SM00971 Serine acetyltransferase, N-terminal AhyD4_RS22175 SM00448 cheY-homologous receiver domain AhyD4_RS22175 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS22180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS22180 SM00387 Histidine kinase-like ATPases AhyD4_RS22180 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS22210 SM00563 Phosphate acyltransferases AhyD4_RS22235 SM00829 Enoylreductase AhyD4_RS22240 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS22290 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AhyD4_RS22290 SM01232 AhyD4_RS22290 AhyD4_RS22365 SM00881 CoA binding domain AhyD4_RS22425 SM00448 cheY-homologous receiver domain AhyD4_RS22425 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS22430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AhyD4_RS22430 SM00387 Histidine kinase-like ATPases AhyD4_RS22430 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS22475 SM00836 DALR anticodon binding domain AhyD4_RS22530 SM00849 Metallo-beta-lactamase superfamily AhyD4_RS22535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AhyD4_RS22535 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22540 SM00345 helix_turn_helix gluconate operon transcriptional repressor AhyD4_RS22540 SM00866 AhyD4_RS22540 AhyD4_RS22555 SM00354 helix_turn _helix lactose operon repressor AhyD4_RS22575 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22580 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22585 SM00342 helix_turn_helix, arabinose operon control protein AhyD4_RS22595 SM00450 Rhodanese Homology Domain AhyD4_RS22630 SM00357 Cold shock protein domain AhyD4_RS22630 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22630 SM00959 Rho termination factor, N-terminal domain AhyD4_RS22640 SM00487 DEAD-like helicases superfamily AhyD4_RS22640 SM00490 helicase superfamily c-terminal domain AhyD4_RS22665 SM00052 Putative diguanylate phosphodiesterase AhyD4_RS22665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AhyD4_RS22665 SM00091 PAS domain AhyD4_RS22665 SM00267 diguanylate cyclase AhyD4_RS22675 SM01004 Delta-aminolevulinic acid dehydratase AhyD4_RS22765 SM00942 Primase C terminal 1 (PriCT-1) AhyD4_RS22805 SM00942 Primase C terminal 1 (PriCT-1) AhyD4_RS22860 SM00421 helix_turn_helix, Lux Regulon AhyD4_RS22870 SM00420 helix_turn_helix, Deoxyribose operon repressor AhyD4_RS22870 SM01134 AhyD4_RS22870 AhyD4_RS22875 SM00448 cheY-homologous receiver domain AhyD4_RS22875 SM00862 Transcriptional regulatory protein, C terminal AhyD4_RS22880 SM00387 Histidine kinase-like ATPases AhyD4_RS22880 SM00388 His Kinase A (phosphoacceptor) domain AhyD4_RS22905 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22945 SM00470 ParB-like nuclease domain AhyD4_RS22960 SM01228 AhyD4_RS22960 AhyD4_RS22975 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS22980 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS23015 SM00382 ATPases associated with a variety of cellular activities AhyD4_RS23025 SM00062 Bacterial periplasmic substrate-binding proteins AhyD4_RS23025 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AhyD4_RS23815 SM00433 TopoisomeraseII