locus-tag class description AhyD4_RS00005 PF11638 DnaA N-terminal domain AhyD4_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AhyD4_RS00005 PF00308 Bacterial dnaA protein AhyD4_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AhyD4_RS00010 PF02767 DNA polymerase III beta subunit, central domain AhyD4_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AhyD4_RS00015 PF02463 RecF/RecN/SMC N terminal domain AhyD4_RS00020 PF18053 DNA gyrase B subunit insert domain AhyD4_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AhyD4_RS00020 PF00204 DNA gyrase B AhyD4_RS00020 PF01751 Toprim domain AhyD4_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00030 PF08279 HTH domain AhyD4_RS00030 PF13280 WYL domain AhyD4_RS00035 PF00011 Hsp20/alpha crystallin family AhyD4_RS00040 PF00011 Hsp20/alpha crystallin family AhyD4_RS00045 PF00155 Aminotransferase class I and II AhyD4_RS00060 PF07690 Major Facilitator Superfamily AhyD4_RS00065 PF00072 Response regulator receiver domain AhyD4_RS00065 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS00070 PF13493 Domain of unknown function (DUF4118) AhyD4_RS00070 PF13492 GAF domain AhyD4_RS00070 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00070 PF02702 Osmosensitive K+ channel His kinase sensor domain AhyD4_RS00075 PF02669 K+-transporting ATPase, c chain AhyD4_RS00085 PF03814 Potassium-transporting ATPase A subunit AhyD4_RS00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhyD4_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00095 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS00100 PF00873 AcrB/AcrD/AcrF family AhyD4_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS00110 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS00140 PF00224 Pyruvate kinase, barrel domain AhyD4_RS00140 PF02887 Pyruvate kinase, alpha/beta domain AhyD4_RS00145 PF07690 Major Facilitator Superfamily AhyD4_RS00155 PF00672 HAMP domain AhyD4_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00155 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS00160 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS00160 PF00072 Response regulator receiver domain AhyD4_RS00160 PF14532 Sigma-54 interaction domain AhyD4_RS00175 PF12146 Serine aminopeptidase, S33 AhyD4_RS00180 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS00185 PF00588 SpoU rRNA Methylase family AhyD4_RS00185 PF12105 SpoU, rRNA methylase, C-terminal AhyD4_RS00190 PF02824 TGS domain AhyD4_RS00190 PF04607 Region found in RelA / SpoT proteins AhyD4_RS00190 PF13291 ACT domain AhyD4_RS00195 PF01192 RNA polymerase Rpb6 AhyD4_RS00200 PF00625 Guanylate kinase AhyD4_RS00205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AhyD4_RS00220 PF00892 EamA-like transporter family AhyD4_RS00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS00235 PF03466 LysR substrate binding domain AhyD4_RS00240 PF00579 tRNA synthetases class I (W and Y) AhyD4_RS00245 PF00582 Universal stress protein family AhyD4_RS00250 PF07055 Enoyl reductase FAD binding domain AhyD4_RS00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AhyD4_RS00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region AhyD4_RS00255 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS00260 PF00210 Ferritin-like domain AhyD4_RS00270 PF07690 Major Facilitator Superfamily AhyD4_RS00275 PF01810 LysE type translocator AhyD4_RS00290 PF16967 E-set like domain AhyD4_RS00290 PF15976 CS1-pili formation C-terminal AhyD4_RS00295 PF18649 EcpB C-terminal domain AhyD4_RS00300 PF16449 Fimbrillin MatB AhyD4_RS00305 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS00305 PF00072 Response regulator receiver domain AhyD4_RS00310 PF00989 PAS fold AhyD4_RS00310 PF00072 Response regulator receiver domain AhyD4_RS00310 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS00310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00310 PF01627 Hpt domain AhyD4_RS00320 PF06580 Histidine kinase AhyD4_RS00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00320 PF07694 5TMR of 5TMR-LYT AhyD4_RS00325 PF04397 LytTr DNA-binding domain AhyD4_RS00325 PF00072 Response regulator receiver domain AhyD4_RS00330 PF07690 Major Facilitator Superfamily AhyD4_RS00335 PF02222 ATP-grasp domain AhyD4_RS00335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AhyD4_RS00340 PF00731 AIR carboxylase AhyD4_RS00355 PF03466 LysR substrate binding domain AhyD4_RS00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS00360 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS00360 PF00593 TonB dependent receptor AhyD4_RS00365 PF01177 Asp/Glu/Hydantoin racemase AhyD4_RS00405 PF02463 RecF/RecN/SMC N terminal domain AhyD4_RS00420 PF01695 IstB-like ATP binding protein AhyD4_RS00425 PF02796 Helix-turn-helix domain of resolvase AhyD4_RS00425 PF00665 Integrase core domain AhyD4_RS00470 PF04002 RadC-like JAB domain AhyD4_RS00515 PF05930 Prophage CP4-57 regulatory protein (AlpA) AhyD4_RS00520 PF00816 H-NS histone family AhyD4_RS00535 PF03472 Autoinducer binding domain AhyD4_RS00535 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS00540 PF05638 Type VI secretion system effector, Hcp AhyD4_RS00545 PF04717 Type VI secretion system, phage-baseplate injector AhyD4_RS00585 PF15608 PELOTA RNA binding domain AhyD4_RS00585 PF11202 Phosphoribosyl transferase (PRTase) AhyD4_RS00605 PF02342 TerD domain AhyD4_RS00610 PF02342 TerD domain AhyD4_RS00615 PF05099 Tellurite resistance protein TerB AhyD4_RS00620 PF03741 Integral membrane protein TerC family AhyD4_RS00625 PF02342 TerD domain AhyD4_RS00630 PF02342 TerD domain AhyD4_RS00640 PF02342 TerD domain AhyD4_RS00645 PF13356 Arm DNA-binding domain AhyD4_RS00645 PF00589 Phage integrase family AhyD4_RS00650 PF00899 ThiF family AhyD4_RS00655 PF02657 Fe-S metabolism associated domain AhyD4_RS00660 PF00266 Aminotransferase class-V AhyD4_RS00665 PF13361 UvrD-like helicase C-terminal domain AhyD4_RS00665 PF00580 UvrD/REP helicase N-terminal domain AhyD4_RS00670 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS00670 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS00670 PF00563 EAL domain AhyD4_RS00675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AhyD4_RS00680 PF00107 Zinc-binding dehydrogenase AhyD4_RS00680 PF08240 Alcohol dehydrogenase GroES-like domain AhyD4_RS00685 PF00155 Aminotransferase class I and II AhyD4_RS00690 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS00690 PF08360 QacR-like protein, C-terminal region AhyD4_RS00695 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS00710 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AhyD4_RS00730 PF03755 YicC-like family, N-terminal region AhyD4_RS00730 PF08340 Domain of unknown function (DUF1732) AhyD4_RS00735 PF03725 3' exoribonuclease family, domain 2 AhyD4_RS00735 PF01138 3' exoribonuclease family, domain 1 AhyD4_RS00740 PF00156 Phosphoribosyl transferase domain AhyD4_RS00745 PF00403 Heavy-metal-associated domain AhyD4_RS00750 PF09278 MerR, DNA binding AhyD4_RS00750 PF00376 MerR family regulatory protein AhyD4_RS00755 PF01590 GAF domain AhyD4_RS00755 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS00755 PF00360 Phytochrome region AhyD4_RS00755 PF00563 EAL domain AhyD4_RS00760 PF06288 Protein of unknown function (DUF1040) AhyD4_RS00765 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AhyD4_RS00765 PF12801 4Fe-4S binding domain AhyD4_RS00765 PF13746 4Fe-4S dicluster domain AhyD4_RS00770 PF01636 Phosphotransferase enzyme family AhyD4_RS00775 PF01323 DSBA-like thioredoxin domain AhyD4_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS00785 PF00005 ABC transporter AhyD4_RS00795 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AhyD4_RS00795 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AhyD4_RS00800 PF00857 Isochorismatase family AhyD4_RS00810 PF04463 Protein of unknown function (DUF523) AhyD4_RS00815 PF01553 Acyltransferase AhyD4_RS00820 PF01553 Acyltransferase AhyD4_RS00825 PF01078 Magnesium chelatase, subunit ChlI AhyD4_RS00825 PF13335 Magnesium chelatase, subunit ChlI C-terminal AhyD4_RS00830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhyD4_RS00830 PF00205 Thiamine pyrophosphate enzyme, central domain AhyD4_RS00830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS00840 PF01063 Amino-transferase class IV AhyD4_RS00845 PF00920 Dehydratase family AhyD4_RS00850 PF00585 C-terminal regulatory domain of Threonine dehydratase AhyD4_RS00850 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS00855 PF00691 OmpA family AhyD4_RS00855 PF01389 OmpA-like transmembrane domain AhyD4_RS00865 PF18074 Primosomal protein N C-terminal domain AhyD4_RS00865 PF17764 3′ DNA-binding domain (3′BD) AhyD4_RS00865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AhyD4_RS00865 PF00271 Helicase conserved C-terminal domain AhyD4_RS00865 PF00270 DEAD/DEAH box helicase AhyD4_RS00870 PF01197 Ribosomal protein L31 AhyD4_RS00875 PF13460 NAD(P)H-binding AhyD4_RS00875 PF11066 Protein of unknown function (DUF2867) AhyD4_RS00880 PF00390 Malic enzyme, N-terminal domain AhyD4_RS00880 PF03949 Malic enzyme, NAD binding domain AhyD4_RS00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS00890 PF00672 HAMP domain AhyD4_RS00890 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS00895 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS00895 PF00072 Response regulator receiver domain AhyD4_RS00900 PF05958 tRNA (Uracil-5-)-methyltransferase AhyD4_RS00915 PF02903 Alpha amylase, N-terminal ig-like domain AhyD4_RS00915 PF00128 Alpha amylase, catalytic domain AhyD4_RS00930 PF00012 Hsp70 protein AhyD4_RS00935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhyD4_RS00935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS00940 PF05981 CreA protein AhyD4_RS00955 PF01258 Prokaryotic dksA/traR C4-type zinc finger AhyD4_RS00960 PF00120 Glutamine synthetase, catalytic domain AhyD4_RS00965 PF00202 Aminotransferase class-III AhyD4_RS00970 PF13416 Bacterial extracellular solute-binding protein AhyD4_RS00975 PF13416 Bacterial extracellular solute-binding protein AhyD4_RS00980 PF00005 ABC transporter AhyD4_RS00980 PF08402 TOBE domain AhyD4_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS00995 PF03473 MOSC domain AhyD4_RS00995 PF03475 3-alpha domain AhyD4_RS01010 PF03061 Thioesterase superfamily AhyD4_RS01015 PF00271 Helicase conserved C-terminal domain AhyD4_RS01015 PF00270 DEAD/DEAH box helicase AhyD4_RS01015 PF09382 RQC domain AhyD4_RS01015 PF16124 RecQ zinc-binding AhyD4_RS01015 PF00570 HRDC domain AhyD4_RS01020 PF00034 Cytochrome c AhyD4_RS01025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AhyD4_RS01035 PF02592 Putative vitamin uptake transporter AhyD4_RS01040 PF03737 Aldolase/RraA AhyD4_RS01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS01045 PF00672 HAMP domain AhyD4_RS01050 PF00571 CBS domain AhyD4_RS01050 PF01769 Divalent cation transporter AhyD4_RS01050 PF03448 MgtE intracellular N domain AhyD4_RS01055 PF10414 Sirohaem synthase dimerisation region AhyD4_RS01055 PF14824 Sirohaem biosynthesis protein central AhyD4_RS01055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhyD4_RS01060 PF01226 Formate/nitrite transporter AhyD4_RS01065 PF13806 Rieske-like [2Fe-2S] domain AhyD4_RS01070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS01070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhyD4_RS01070 PF18267 Rubredoxin NAD+ reductase C-terminal domain AhyD4_RS01070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhyD4_RS01070 PF04324 BFD-like [2Fe-2S] binding domain AhyD4_RS01075 PF03466 LysR substrate binding domain AhyD4_RS01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS01080 PF07690 Major Facilitator Superfamily AhyD4_RS01085 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS01085 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS01085 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS01090 PF00227 Proteasome subunit AhyD4_RS01100 PF03485 Arginyl tRNA synthetase N terminal domain AhyD4_RS01100 PF00750 tRNA synthetases class I (R) AhyD4_RS01100 PF05746 DALR anticodon binding domain AhyD4_RS01110 PF04545 Sigma-70, region 4 AhyD4_RS01110 PF04542 Sigma-70 region 2 AhyD4_RS01115 PF12973 ChrR Cupin-like domain AhyD4_RS01120 PF02673 Bacitracin resistance protein BacA AhyD4_RS01125 PF00248 Aldo/keto reductase family AhyD4_RS01130 PF01263 Aldose 1-epimerase AhyD4_RS01135 PF00288 GHMP kinases N terminal domain AhyD4_RS01135 PF08544 GHMP kinases C terminal AhyD4_RS01135 PF10509 Galactokinase galactose-binding signature AhyD4_RS01140 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AhyD4_RS01140 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AhyD4_RS01145 PF16363 GDP-mannose 4,6 dehydratase AhyD4_RS01150 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS01155 PF16353 Domain of unknown function(DUF4981) AhyD4_RS01155 PF02837 Glycosyl hydrolases family 2, sugar binding domain AhyD4_RS01155 PF02929 Beta galactosidase small chain AhyD4_RS01155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AhyD4_RS01155 PF00703 Glycosyl hydrolases family 2 AhyD4_RS01160 PF13407 Periplasmic binding protein domain AhyD4_RS01165 PF00005 ABC transporter AhyD4_RS01170 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS01175 PF00672 HAMP domain AhyD4_RS01175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS01175 PF02743 Cache domain AhyD4_RS01195 PF00696 Amino acid kinase family AhyD4_RS01200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhyD4_RS01200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhyD4_RS01205 PF03606 C4-dicarboxylate anaerobic carrier AhyD4_RS01210 PF02863 Arginine repressor, C-terminal domain AhyD4_RS01210 PF01316 Arginine repressor, DNA binding domain AhyD4_RS01215 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AhyD4_RS01215 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AhyD4_RS01220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhyD4_RS01220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhyD4_RS01235 PF02666 Phosphatidylserine decarboxylase AhyD4_RS01240 PF02743 Cache domain AhyD4_RS01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS01240 PF00672 HAMP domain AhyD4_RS01245 PF08212 Lipocalin-like domain AhyD4_RS01250 PF06719 AraC-type transcriptional regulator N-terminus AhyD4_RS01250 PF12833 Helix-turn-helix domain AhyD4_RS01255 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS01260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AhyD4_RS01260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AhyD4_RS01260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AhyD4_RS01265 PF02233 NAD(P) transhydrogenase beta subunit AhyD4_RS01275 PF08348 YheO-like PAS domain AhyD4_RS01275 PF13309 HTH domain AhyD4_RS01280 PF03313 Serine dehydratase alpha chain AhyD4_RS01285 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhyD4_RS01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS01295 PF13525 Outer membrane lipoprotein AhyD4_RS01300 PF01479 S4 domain AhyD4_RS01300 PF00849 RNA pseudouridylate synthase AhyD4_RS01305 PF02578 Multi-copper polyphenol oxidoreductase laccase AhyD4_RS01310 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS01310 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS01310 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS01310 PF17871 AAA lid domain AhyD4_RS01310 PF02861 Clp amino terminal domain, pathogenicity island component AhyD4_RS01320 PF03590 Aspartate-ammonia ligase AhyD4_RS01325 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS01335 PF10063 Uncharacterized integral membrane protein (DUF2301) AhyD4_RS01340 PF00478 IMP dehydrogenase / GMP reductase domain AhyD4_RS01340 PF00571 CBS domain AhyD4_RS01355 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS01365 PF00072 Response regulator receiver domain AhyD4_RS01365 PF00158 Sigma-54 interaction domain AhyD4_RS01370 PF06496 Protein of unknown function (DUF1097) AhyD4_RS01375 PF00174 Oxidoreductase molybdopterin binding domain AhyD4_RS01380 PF01794 Ferric reductase like transmembrane component AhyD4_RS01395 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS01395 PF00072 Response regulator receiver domain AhyD4_RS01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS01410 PF18364 Molybdopterin oxidoreductase N-terminal domain AhyD4_RS01410 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS01410 PF00384 Molybdopterin oxidoreductase AhyD4_RS01415 PF03264 NapC/NirT cytochrome c family, N-terminal region AhyD4_RS01420 PF01751 Toprim domain AhyD4_RS01420 PF01131 DNA topoisomerase AhyD4_RS01435 PF12833 Helix-turn-helix domain AhyD4_RS01435 PF12852 Cupin AhyD4_RS01440 PF02386 Cation transport protein AhyD4_RS01445 PF02080 TrkA-C domain AhyD4_RS01445 PF02254 TrkA-N domain AhyD4_RS01450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AhyD4_RS01450 PF01565 FAD binding domain AhyD4_RS01455 PF08279 HTH domain AhyD4_RS01455 PF02237 Biotin protein ligase C terminal domain AhyD4_RS01455 PF03099 Biotin/lipoate A/B protein ligase family AhyD4_RS01460 PF00485 Phosphoribulokinase / Uridine kinase family AhyD4_RS01475 PF03144 Elongation factor Tu domain 2 AhyD4_RS01475 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS01475 PF03143 Elongation factor Tu C-terminal domain AhyD4_RS01485 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AhyD4_RS01490 PF02357 Transcription termination factor nusG AhyD4_RS01490 PF00467 KOW motif AhyD4_RS01495 PF00298 Ribosomal protein L11, RNA binding domain AhyD4_RS01495 PF03946 Ribosomal protein L11, N-terminal domain AhyD4_RS01500 PF00687 Ribosomal protein L1p/L10e family AhyD4_RS01505 PF00466 Ribosomal protein L10 AhyD4_RS01510 PF00542 Ribosomal protein L7/L12 C-terminal domain AhyD4_RS01510 PF16320 Ribosomal protein L7/L12 dimerisation domain AhyD4_RS01515 PF04560 RNA polymerase Rpb2, domain 7 AhyD4_RS01515 PF04565 RNA polymerase Rpb2, domain 3 AhyD4_RS01515 PF10385 RNA polymerase beta subunit external 1 domain AhyD4_RS01515 PF00562 RNA polymerase Rpb2, domain 6 AhyD4_RS01515 PF04561 RNA polymerase Rpb2, domain 2 AhyD4_RS01515 PF04563 RNA polymerase beta subunit AhyD4_RS01520 PF04997 RNA polymerase Rpb1, domain 1 AhyD4_RS01520 PF00623 RNA polymerase Rpb1, domain 2 AhyD4_RS01520 PF04983 RNA polymerase Rpb1, domain 3 AhyD4_RS01520 PF05000 RNA polymerase Rpb1, domain 4 AhyD4_RS01520 PF04998 RNA polymerase Rpb1, domain 5 AhyD4_RS01530 PF13309 HTH domain AhyD4_RS01530 PF08348 YheO-like PAS domain AhyD4_RS01535 PF01042 Endoribonuclease L-PSP AhyD4_RS01540 PF02635 DsrE/DsrF-like family AhyD4_RS01545 PF02635 DsrE/DsrF-like family AhyD4_RS01550 PF04077 DsrH like protein AhyD4_RS01560 PF00177 Ribosomal protein S7p/S5e AhyD4_RS01565 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS01565 PF03144 Elongation factor Tu domain 2 AhyD4_RS01565 PF03764 Elongation factor G, domain IV AhyD4_RS01565 PF00679 Elongation factor G C-terminus AhyD4_RS01565 PF14492 Elongation Factor G, domain II AhyD4_RS01570 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS01570 PF03143 Elongation factor Tu C-terminal domain AhyD4_RS01570 PF03144 Elongation factor Tu domain 2 AhyD4_RS01615 PF00860 Permease family AhyD4_RS01620 PF02733 Dak1 domain AhyD4_RS01625 PF02734 DAK2 domain AhyD4_RS01630 PF03610 PTS system fructose IIA component AhyD4_RS01630 PF05524 PEP-utilising enzyme, N-terminal AhyD4_RS01630 PF00391 PEP-utilising enzyme, mobile domain AhyD4_RS01630 PF00381 PTS HPr component phosphorylation site AhyD4_RS01635 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS01640 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS01640 PF00989 PAS fold AhyD4_RS01640 PF00158 Sigma-54 interaction domain AhyD4_RS01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS01645 PF03466 LysR substrate binding domain AhyD4_RS01650 PF04371 Porphyromonas-type peptidyl-arginine deiminase AhyD4_RS01655 PF00106 short chain dehydrogenase AhyD4_RS01660 PF01594 AI-2E family transporter AhyD4_RS01665 PF00293 NUDIX domain AhyD4_RS01690 PF00199 Catalase AhyD4_RS01690 PF06628 Catalase-related immune-responsive AhyD4_RS01695 PF00583 Acetyltransferase (GNAT) family AhyD4_RS01715 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS01725 PF08402 TOBE domain AhyD4_RS01725 PF00005 ABC transporter AhyD4_RS01735 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS01750 PF07702 UTRA domain AhyD4_RS01750 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS01760 PF03466 LysR substrate binding domain AhyD4_RS01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS01770 PF02678 Pirin AhyD4_RS01770 PF17954 Quercetinase C-terminal cupin domain AhyD4_RS01775 PF07681 DoxX AhyD4_RS01780 PF17946 RecC C-terminal domain AhyD4_RS01785 PF12705 PD-(D/E)XK nuclease superfamily AhyD4_RS01785 PF13361 UvrD-like helicase C-terminal domain AhyD4_RS01785 PF00580 UvrD/REP helicase N-terminal domain AhyD4_RS01790 PF13538 UvrD-like helicase C-terminal domain AhyD4_RS01795 PF02463 RecF/RecN/SMC N terminal domain AhyD4_RS01800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS01810 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS01835 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS01835 PF00072 Response regulator receiver domain AhyD4_RS01840 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS01840 PF00672 HAMP domain AhyD4_RS01845 PF01590 GAF domain AhyD4_RS01845 PF00563 EAL domain AhyD4_RS01845 PF00360 Phytochrome region AhyD4_RS01845 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS01850 PF00593 TonB dependent receptor AhyD4_RS01850 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS01855 PF00313 'Cold-shock' DNA-binding domain AhyD4_RS01865 PF16916 Dimerisation domain of Zinc Transporter AhyD4_RS01865 PF01545 Cation efflux family AhyD4_RS01875 PF00436 Single-strand binding protein family AhyD4_RS01880 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS01885 PF00005 ABC transporter AhyD4_RS01885 PF17755 UvrA DNA-binding domain AhyD4_RS01885 PF17760 UvrA interaction domain AhyD4_RS01895 PF03922 OmpW family AhyD4_RS01900 PF00672 HAMP domain AhyD4_RS01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS01915 PF02219 Methylenetetrahydrofolate reductase AhyD4_RS01925 PF03594 Benzoate membrane transport protein AhyD4_RS01930 PF01381 Helix-turn-helix AhyD4_RS01930 PF07883 Cupin domain AhyD4_RS01960 PF04363 Protein of unknown function (DUF496) AhyD4_RS01970 PF04751 Protein of unknown function (DUF615) AhyD4_RS01975 PF01523 Putative modulator of DNA gyrase AhyD4_RS01980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AhyD4_RS01985 PF01722 BolA-like protein AhyD4_RS01995 PF05494 MlaC protein AhyD4_RS02000 PF02470 MlaD protein AhyD4_RS02005 PF02405 Permease MlaE AhyD4_RS02010 PF00005 ABC transporter AhyD4_RS02015 PF01380 SIS domain AhyD4_RS02015 PF00571 CBS domain AhyD4_RS02025 PF06835 Lipopolysaccharide-assembly, LptC-related AhyD4_RS02030 PF03968 OstA-like protein AhyD4_RS02035 PF12399 Branched-chain amino acid ATP-binding cassette transporter AhyD4_RS02035 PF00005 ABC transporter AhyD4_RS02040 PF04552 Sigma-54, DNA binding domain AhyD4_RS02040 PF04963 Sigma-54 factor, core binding domain AhyD4_RS02040 PF00309 Sigma-54 factor, Activator interacting domain (AID) AhyD4_RS02045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AhyD4_RS02050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS02055 PF03668 P-loop ATPase protein family AhyD4_RS02060 PF00381 PTS HPr component phosphorylation site AhyD4_RS02065 PF05043 Mga helix-turn-helix domain AhyD4_RS02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS02065 PF08279 HTH domain AhyD4_RS02065 PF00874 PRD domain AhyD4_RS02070 PF07071 KDGP aldolase AhyD4_RS02075 PF03841 L-seryl-tRNA selenium transferase AhyD4_RS02080 PF01979 Amidohydrolase family AhyD4_RS02110 PF13180 PDZ domain AhyD4_RS02115 PF00595 PDZ domain AhyD4_RS02115 PF13180 PDZ domain AhyD4_RS02125 PF03969 AFG1-like ATPase AhyD4_RS02130 PF00572 Ribosomal protein L13 AhyD4_RS02135 PF00380 Ribosomal protein S9/S16 AhyD4_RS02140 PF00355 Rieske [2Fe-2S] domain AhyD4_RS02140 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AhyD4_RS02145 PF00032 Cytochrome b(C-terminal)/b6/petD AhyD4_RS02145 PF00033 Cytochrome b/b6/petB AhyD4_RS02150 PF02167 Cytochrome C1 family AhyD4_RS02155 PF00043 Glutathione S-transferase, C-terminal domain AhyD4_RS02155 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS02160 PF04386 Stringent starvation protein B AhyD4_RS02165 PF04972 BON domain AhyD4_RS02170 PF13580 SIS domain AhyD4_RS02175 PF02021 Uncharacterised protein family UPF0102 AhyD4_RS02180 PF04348 LppC putative lipoprotein AhyD4_RS02185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhyD4_RS02195 PF02381 MraZ protein, putative antitoxin-like AhyD4_RS02200 PF01795 MraW methylase family AhyD4_RS02205 PF04999 Cell division protein FtsL AhyD4_RS02210 PF03717 Penicillin-binding Protein dimerisation domain AhyD4_RS02210 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS02215 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS02215 PF01225 Mur ligase family, catalytic domain AhyD4_RS02215 PF08245 Mur ligase middle domain AhyD4_RS02220 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS02220 PF01225 Mur ligase family, catalytic domain AhyD4_RS02220 PF08245 Mur ligase middle domain AhyD4_RS02225 PF00953 Glycosyl transferase family 4 AhyD4_RS02225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AhyD4_RS02230 PF08245 Mur ligase middle domain AhyD4_RS02230 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS02235 PF01098 Cell cycle protein AhyD4_RS02240 PF04101 Glycosyltransferase family 28 C-terminal domain AhyD4_RS02240 PF03033 Glycosyltransferase family 28 N-terminal domain AhyD4_RS02245 PF01225 Mur ligase family, catalytic domain AhyD4_RS02245 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS02245 PF08245 Mur ligase middle domain AhyD4_RS02250 PF03799 Cell division protein FtsQ AhyD4_RS02250 PF08478 POTRA domain, FtsQ-type AhyD4_RS02255 PF02491 SHS2 domain inserted in FTSA AhyD4_RS02260 PF00091 Tubulin/FtsZ family, GTPase domain AhyD4_RS02260 PF12327 FtsZ family, C-terminal domain AhyD4_RS02265 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AhyD4_RS02275 PF07516 SecA Wing and Scaffold domain AhyD4_RS02275 PF01043 SecA preprotein cross-linking domain AhyD4_RS02275 PF07517 SecA DEAD-like domain AhyD4_RS02275 PF02810 SEC-C motif AhyD4_RS02285 PF00293 NUDIX domain AhyD4_RS02290 PF03884 DNA gyrase inhibitor YacG AhyD4_RS02295 PF07072 Cell division protein AhyD4_RS02300 PF01121 Dephospho-CoA kinase AhyD4_RS02305 PF01478 Type IV leader peptidase family AhyD4_RS02305 PF06750 Bacterial Peptidase A24 N-terminal domain AhyD4_RS02310 PF00482 Type II secretion system (T2SS), protein F AhyD4_RS02315 PF00437 Type II/IV secretion system protein AhyD4_RS02315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AhyD4_RS02320 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS02325 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AhyD4_RS02325 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AhyD4_RS02340 PF07729 FCD domain AhyD4_RS02340 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS02345 PF17831 Pyruvate dehydrogenase E1 component middle domain AhyD4_RS02345 PF00456 Transketolase, thiamine diphosphate binding domain AhyD4_RS02350 PF02817 e3 binding domain AhyD4_RS02350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AhyD4_RS02350 PF00364 Biotin-requiring enzyme AhyD4_RS02355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS02355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhyD4_RS02360 PF13426 PAS domain AhyD4_RS02360 PF08447 PAS fold AhyD4_RS02360 PF08448 PAS fold AhyD4_RS02360 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS02360 PF00563 EAL domain AhyD4_RS02360 PF05231 MASE1 AhyD4_RS02370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS02370 PF00672 HAMP domain AhyD4_RS02370 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS02375 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS02375 PF00672 HAMP domain AhyD4_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS02380 PF01734 Patatin-like phospholipase AhyD4_RS02385 PF11791 Aconitate B N-terminal domain AhyD4_RS02385 PF00330 Aconitase family (aconitate hydratase) AhyD4_RS02385 PF06434 Aconitate hydratase 2 N-terminus AhyD4_RS02395 PF03466 LysR substrate binding domain AhyD4_RS02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS02400 PF01810 LysE type translocator AhyD4_RS02410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AhyD4_RS02410 PF07683 Cobalamin synthesis protein cobW C-terminal domain AhyD4_RS02415 PF07690 Major Facilitator Superfamily AhyD4_RS02425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AhyD4_RS02430 PF02152 Dihydroneopterin aldolase AhyD4_RS02435 PF02660 Glycerol-3-phosphate acyltransferase AhyD4_RS02475 PF07670 Nucleoside recognition AhyD4_RS02480 PF00072 Response regulator receiver domain AhyD4_RS02480 PF01584 CheW-like domain AhyD4_RS02485 PF00106 short chain dehydrogenase AhyD4_RS02490 PF05127 Helicase AhyD4_RS02490 PF17176 tRNA-binding domain AhyD4_RS02490 PF08351 Domain of unknown function (DUF1726) AhyD4_RS02490 PF13718 GNAT acetyltransferase 2 AhyD4_RS02505 PF00210 Ferritin-like domain AhyD4_RS02515 PF02142 MGS-like domain AhyD4_RS02530 PF17763 Glutaminase/Asparaginase C-terminal domain AhyD4_RS02530 PF00710 Asparaginase, N-terminal AhyD4_RS02545 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS02550 PF00367 phosphotransferase system, EIIB AhyD4_RS02550 PF02378 Phosphotransferase system, EIIC AhyD4_RS02555 PF00128 Alpha amylase, catalytic domain AhyD4_RS02555 PF11941 Domain of unknown function (DUF3459) AhyD4_RS02560 PF12464 Maltose acetyltransferase AhyD4_RS02560 PF14602 Hexapeptide repeat of succinyl-transferase AhyD4_RS02565 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS02570 PF00892 EamA-like transporter family AhyD4_RS02580 PF00171 Aldehyde dehydrogenase family AhyD4_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS02595 PF08402 TOBE domain AhyD4_RS02595 PF00005 ABC transporter AhyD4_RS02600 PF13416 Bacterial extracellular solute-binding protein AhyD4_RS02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS02605 PF03466 LysR substrate binding domain AhyD4_RS02610 PF03553 Na+/H+ antiporter family AhyD4_RS02650 PF00534 Glycosyl transferases group 1 AhyD4_RS02650 PF08323 Starch synthase catalytic domain AhyD4_RS02655 PF00483 Nucleotidyl transferase AhyD4_RS02660 PF08468 Methyltransferase small domain N-terminal AhyD4_RS02660 PF05175 Methyltransferase small domain AhyD4_RS02665 PF00701 Dihydrodipicolinate synthetase family AhyD4_RS02670 PF00563 EAL domain AhyD4_RS02670 PF01590 GAF domain AhyD4_RS02670 PF00360 Phytochrome region AhyD4_RS02670 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS02680 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS02685 PF17209 Hfq protein AhyD4_RS02690 PF04403 Paraquat-inducible protein A AhyD4_RS02695 PF02470 MlaD protein AhyD4_RS02700 PF03886 ABC-type transport auxiliary lipoprotein component AhyD4_RS02705 PF01389 OmpA-like transmembrane domain AhyD4_RS02705 PF00691 OmpA family AhyD4_RS02715 PF00657 GDSL-like Lipase/Acylhydrolase AhyD4_RS02720 PF04076 Bacterial OB fold (BOF) protein AhyD4_RS02725 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AhyD4_RS02725 PF01464 Transglycosylase SLT domain AhyD4_RS02730 PF04362 Bacterial Fe(2+) trafficking AhyD4_RS02735 PF00633 Helix-hairpin-helix motif AhyD4_RS02735 PF00730 HhH-GPD superfamily base excision DNA repair protein AhyD4_RS02735 PF14815 NUDIX domain AhyD4_RS02735 PF10576 Iron-sulfur binding domain of endonuclease III AhyD4_RS02740 PF16537 Type II secretion system protein B AhyD4_RS02745 PF01471 Putative peptidoglycan binding domain AhyD4_RS02745 PF13401 AAA domain AhyD4_RS02755 PF01966 HD domain AhyD4_RS02755 PF01743 Poly A polymerase head domain AhyD4_RS02755 PF12627 Probable RNA and SrmB- binding site of polymerase A AhyD4_RS02770 PF04172 LrgB-like family AhyD4_RS02775 PF03788 LrgA family AhyD4_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS02780 PF03466 LysR substrate binding domain AhyD4_RS02785 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS02785 PF00155 Aminotransferase class I and II AhyD4_RS02805 PF04073 Aminoacyl-tRNA editing domain AhyD4_RS02810 PF01384 Phosphate transporter family AhyD4_RS02815 PF01865 Protein of unknown function DUF47 AhyD4_RS02830 PF03279 Bacterial lipid A biosynthesis acyltransferase AhyD4_RS02835 PF01467 Cytidylyltransferase-like AhyD4_RS02835 PF00294 pfkB family carbohydrate kinase AhyD4_RS02840 PF02321 Outer membrane efflux protein AhyD4_RS02845 PF00293 NUDIX domain AhyD4_RS02850 PF06853 Protein of unknown function (DUF1249) AhyD4_RS02855 PF00149 Calcineurin-like phosphoesterase AhyD4_RS02860 PF05728 Uncharacterised protein family (UPF0227) AhyD4_RS02865 PF00293 NUDIX domain AhyD4_RS02875 PF07869 Protein of unknown function (DUF1656) AhyD4_RS02880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS02880 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS02885 PF04632 Fusaric acid resistance protein family AhyD4_RS02890 PF00204 DNA gyrase B AhyD4_RS02890 PF01751 Toprim domain AhyD4_RS02890 PF00986 DNA gyrase B subunit, carboxyl terminus AhyD4_RS02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS02895 PF03989 DNA gyrase C-terminal domain, beta-propeller AhyD4_RS02895 PF00521 DNA gyrase/topoisomerase IV, subunit A AhyD4_RS02930 PF00226 DnaJ domain AhyD4_RS02930 PF01556 DnaJ C terminal domain AhyD4_RS02930 PF00684 DnaJ central domain AhyD4_RS02935 PF00578 AhpC/TSA family AhyD4_RS02960 PF01553 Acyltransferase AhyD4_RS02965 PF04012 PspA/IM30 family AhyD4_RS02980 PF01541 GIY-YIG catalytic domain AhyD4_RS02990 PF00892 EamA-like transporter family AhyD4_RS02995 PF03167 Uracil DNA glycosylase superfamily AhyD4_RS03000 PF00892 EamA-like transporter family AhyD4_RS03010 PF00950 ABC 3 transport family AhyD4_RS03015 PF00005 ABC transporter AhyD4_RS03020 PF01297 Zinc-uptake complex component A periplasmic AhyD4_RS03040 PF01551 Peptidase family M23 AhyD4_RS03040 PF08525 Opacity-associated protein A N-terminal motif AhyD4_RS03040 PF01476 LysM domain AhyD4_RS03045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS03050 PF04222 Protein of unknown function (DUF416) AhyD4_RS03065 PF02028 BCCT, betaine/carnitine/choline family transporter AhyD4_RS03070 PF01624 MutS domain I AhyD4_RS03070 PF05188 MutS domain II AhyD4_RS03070 PF05192 MutS domain III AhyD4_RS03070 PF00488 MutS domain V AhyD4_RS03070 PF05190 MutS family domain IV AhyD4_RS03085 PF02464 Competence-damaged protein AhyD4_RS03090 PF00154 recA bacterial DNA recombination protein AhyD4_RS03095 PF02631 RecX family AhyD4_RS03100 PF02272 DHHA1 domain AhyD4_RS03100 PF01411 tRNA synthetases class II (A) AhyD4_RS03100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AhyD4_RS03105 PF01842 ACT domain AhyD4_RS03105 PF00696 Amino acid kinase family AhyD4_RS03105 PF13840 ACT domain AhyD4_RS03110 PF02599 Global regulator protein family AhyD4_RS03145 PF00768 D-alanyl-D-alanine carboxypeptidase AhyD4_RS03150 PF09335 SNARE associated Golgi protein AhyD4_RS03155 PF00571 CBS domain AhyD4_RS03155 PF03471 Transporter associated domain AhyD4_RS03155 PF01595 Cyclin M transmembrane N-terminal domain AhyD4_RS03160 PF08264 Anticodon-binding domain of tRNA AhyD4_RS03160 PF00133 tRNA synthetases class I (I, L, M and V) AhyD4_RS03160 PF10458 Valyl tRNA synthetase tRNA binding arm AhyD4_RS03165 PF04364 DNA polymerase III chi subunit, HolC AhyD4_RS03170 PF00883 Cytosol aminopeptidase family, catalytic domain AhyD4_RS03170 PF02789 Cytosol aminopeptidase family, N-terminal domain AhyD4_RS03175 PF03739 Lipopolysaccharide export system permease LptF/LptG AhyD4_RS03180 PF03739 Lipopolysaccharide export system permease LptF/LptG AhyD4_RS03195 PF00589 Phage integrase family AhyD4_RS03195 PF13356 Arm DNA-binding domain AhyD4_RS03210 PF08346 AntA/AntB antirepressor AhyD4_RS03210 PF10548 P22AR C-terminal domain AhyD4_RS03235 PF00909 Ammonium Transporter Family AhyD4_RS03240 PF05958 tRNA (Uracil-5-)-methyltransferase AhyD4_RS03240 PF01938 TRAM domain AhyD4_RS03245 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS03250 PF01026 TatD related DNase AhyD4_RS03255 PF01773 Na+ dependent nucleoside transporter N-terminus AhyD4_RS03255 PF07662 Na+ dependent nucleoside transporter C-terminus AhyD4_RS03255 PF07670 Nucleoside recognition AhyD4_RS03265 PF01791 DeoC/LacD family aldolase AhyD4_RS03270 PF00591 Glycosyl transferase family, a/b domain AhyD4_RS03270 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AhyD4_RS03270 PF02885 Glycosyl transferase family, helical bundle domain AhyD4_RS03275 PF01676 Metalloenzyme superfamily AhyD4_RS03280 PF01048 Phosphorylase superfamily AhyD4_RS03285 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS03285 PF05231 MASE1 AhyD4_RS03285 PF00563 EAL domain AhyD4_RS03285 PF08448 PAS fold AhyD4_RS03285 PF13426 PAS domain AhyD4_RS03285 PF08447 PAS fold AhyD4_RS03295 PF18429 Domain of unknown function (DUF5609) AhyD4_RS03310 PF18073 Rubredoxin metal binding domain AhyD4_RS03315 PF07238 PilZ domain AhyD4_RS03320 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AhyD4_RS03325 PF00216 Bacterial DNA-binding protein AhyD4_RS03335 PF01207 Dihydrouridine synthase (Dus) AhyD4_RS03355 PF05525 Branched-chain amino acid transport protein AhyD4_RS03360 PF05525 Branched-chain amino acid transport protein AhyD4_RS03365 PF05175 Methyltransferase small domain AhyD4_RS03370 PF00270 DEAD/DEAH box helicase AhyD4_RS03370 PF00271 Helicase conserved C-terminal domain AhyD4_RS03375 PF03883 Peroxide stress protein YaaA AhyD4_RS03380 PF00437 Type II/IV secretion system protein AhyD4_RS03385 PF00437 Type II/IV secretion system protein AhyD4_RS03390 PF01168 Alanine racemase, N-terminal domain AhyD4_RS03395 PF03807 NADP oxidoreductase coenzyme F420-dependent AhyD4_RS03395 PF14748 Pyrroline-5-carboxylate reductase dimerisation AhyD4_RS03400 PF02325 YGGT family AhyD4_RS03405 PF02594 Uncharacterised ACR, YggU family COG1872 AhyD4_RS03420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS03430 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS03435 PF10952 Protein of unknown function (DUF2753) AhyD4_RS03440 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS03455 PF00106 short chain dehydrogenase AhyD4_RS03460 PF04073 Aminoacyl-tRNA editing domain AhyD4_RS03460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhyD4_RS03460 PF03129 Anticodon binding domain AhyD4_RS03465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS03465 PF00672 HAMP domain AhyD4_RS03470 PF01330 RuvA N terminal domain AhyD4_RS03470 PF07499 RuvA, C-terminal domain AhyD4_RS03475 PF17864 RuvB AAA lid domain AhyD4_RS03475 PF05491 RuvB C-terminal winged helix domain AhyD4_RS03475 PF05496 Holliday junction DNA helicase RuvB P-loop domain AhyD4_RS03480 PF01654 Cytochrome bd terminal oxidase subunit I AhyD4_RS03485 PF02322 Cytochrome bd terminal oxidase subunit II AhyD4_RS03490 PF08173 Membrane bound YbgT-like protein AhyD4_RS03495 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AhyD4_RS03500 PF03061 Thioesterase superfamily AhyD4_RS03505 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS03510 PF02472 Biopolymer transport protein ExbD/TolR AhyD4_RS03520 PF04052 TolB amino-terminal domain AhyD4_RS03520 PF07676 WD40-like Beta Propeller Repeat AhyD4_RS03525 PF00691 OmpA family AhyD4_RS03530 PF13174 Tetratricopeptide repeat AhyD4_RS03530 PF16331 TolA binding protein trimerisation AhyD4_RS03585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS03585 PF00672 HAMP domain AhyD4_RS03590 PF02445 Quinolinate synthetase A protein AhyD4_RS03595 PF01263 Aldose 1-epimerase AhyD4_RS03600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS03600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AhyD4_RS03605 PF02446 4-alpha-glucanotransferase AhyD4_RS03610 PF00128 Alpha amylase, catalytic domain AhyD4_RS03610 PF02806 Alpha amylase, C-terminal all-beta domain AhyD4_RS03610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AhyD4_RS03615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AhyD4_RS03615 PF00128 Alpha amylase, catalytic domain AhyD4_RS03620 PF01641 SelR domain AhyD4_RS03630 PF00293 NUDIX domain AhyD4_RS03635 PF00107 Zinc-binding dehydrogenase AhyD4_RS03635 PF16884 N-terminal domain of oxidoreductase AhyD4_RS03640 PF02566 OsmC-like protein AhyD4_RS03645 PF01047 MarR family AhyD4_RS03660 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS03670 PF07690 Major Facilitator Superfamily AhyD4_RS03690 PF00209 Sodium:neurotransmitter symporter family AhyD4_RS03700 PF00209 Sodium:neurotransmitter symporter family AhyD4_RS03725 PF00155 Aminotransferase class I and II AhyD4_RS03725 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS03735 PF01810 LysE type translocator AhyD4_RS03740 PF01177 Asp/Glu/Hydantoin racemase AhyD4_RS03745 PF00394 Multicopper oxidase AhyD4_RS03745 PF07732 Multicopper oxidase AhyD4_RS03745 PF07731 Multicopper oxidase AhyD4_RS03755 PF04074 YhcH/YjgK/YiaL AhyD4_RS03760 PF00871 Acetokinase family AhyD4_RS03765 PF00924 Mechanosensitive ion channel AhyD4_RS03770 PF17969 L,D-transpeptidase C-terminal domain AhyD4_RS03770 PF03734 L,D-transpeptidase catalytic domain AhyD4_RS03775 PF00474 Sodium:solute symporter family AhyD4_RS03780 PF00561 alpha/beta hydrolase fold AhyD4_RS03805 PF02525 Flavodoxin-like fold AhyD4_RS03810 PF03466 LysR substrate binding domain AhyD4_RS03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS03815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AhyD4_RS03825 PF00005 ABC transporter AhyD4_RS03825 PF12848 ABC transporter AhyD4_RS03830 PF00571 CBS domain AhyD4_RS03830 PF01380 SIS domain AhyD4_RS03835 PF01957 NfeD-like C-terminal, partner-binding AhyD4_RS03840 PF01145 SPFH domain / Band 7 family AhyD4_RS03840 PF16200 C-terminal region of band_7 AhyD4_RS03845 PF14824 Sirohaem biosynthesis protein central AhyD4_RS03845 PF10414 Sirohaem synthase dimerisation region AhyD4_RS03845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhyD4_RS03850 PF01507 Phosphoadenosine phosphosulfate reductase family AhyD4_RS03855 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS03860 PF03600 Citrate transporter AhyD4_RS03860 PF02080 TrkA-C domain AhyD4_RS03885 PF08447 PAS fold AhyD4_RS03885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS03905 PF00005 ABC transporter AhyD4_RS03920 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AhyD4_RS03935 PF00719 Inorganic pyrophosphatase AhyD4_RS03940 PF01225 Mur ligase family, catalytic domain AhyD4_RS03940 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS03940 PF08245 Mur ligase middle domain AhyD4_RS03945 PF02441 Flavoprotein AhyD4_RS03950 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS03955 PF00156 Phosphoribosyl transferase domain AhyD4_RS03960 PF00005 ABC transporter AhyD4_RS03965 PF01061 ABC-2 type transporter AhyD4_RS03970 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AhyD4_RS03975 PF01869 BadF/BadG/BcrA/BcrD ATPase family AhyD4_RS03995 PF02569 Pantoate-beta-alanine ligase AhyD4_RS04000 PF02548 Ketopantoate hydroxymethyltransferase AhyD4_RS04005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AhyD4_RS04010 PF12626 Polymerase A arginine-rich C-terminus AhyD4_RS04010 PF01743 Poly A polymerase head domain AhyD4_RS04010 PF12627 Probable RNA and SrmB- binding site of polymerase A AhyD4_RS04015 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhyD4_RS04020 PF01258 Prokaryotic dksA/traR C4-type zinc finger AhyD4_RS04025 PF03749 Sugar fermentation stimulation protein RE domain AhyD4_RS04025 PF17746 SfsA N-terminal OB domain AhyD4_RS04035 PF00271 Helicase conserved C-terminal domain AhyD4_RS04035 PF00270 DEAD/DEAH box helicase AhyD4_RS04035 PF08482 ATP-dependent helicase C-terminal AhyD4_RS04035 PF04408 Helicase associated domain (HA2) AhyD4_RS04040 PF00912 Transglycosylase AhyD4_RS04040 PF14814 Bifunctional transglycosylase second domain AhyD4_RS04040 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS04045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS04050 PF00893 Small Multidrug Resistance protein AhyD4_RS04055 PF00893 Small Multidrug Resistance protein AhyD4_RS04065 PF11849 Domain of unknown function (DUF3369) AhyD4_RS04075 PF01569 PAP2 superfamily AhyD4_RS04090 PF00202 Aminotransferase class-III AhyD4_RS04095 PF00654 Voltage gated chloride channel AhyD4_RS04105 PF01521 Iron-sulphur cluster biosynthesis AhyD4_RS04130 PF01810 LysE type translocator AhyD4_RS04135 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS04140 PF01207 Dihydrouridine synthase (Dus) AhyD4_RS04145 PF02321 Outer membrane efflux protein AhyD4_RS04150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS04180 PF00072 Response regulator receiver domain AhyD4_RS04185 PF00854 POT family AhyD4_RS04190 PF00483 Nucleotidyl transferase AhyD4_RS04200 PF00459 Inositol monophosphatase family AhyD4_RS04205 PF03795 YCII-related domain AhyD4_RS04210 PF04279 Intracellular septation protein A AhyD4_RS04215 PF00282 Pyridoxal-dependent decarboxylase conserved domain AhyD4_RS04220 PF03006 Haemolysin-III related AhyD4_RS04225 PF02080 TrkA-C domain AhyD4_RS04225 PF06826 Predicted Permease Membrane Region AhyD4_RS04240 PF01584 CheW-like domain AhyD4_RS04240 PF00072 Response regulator receiver domain AhyD4_RS04245 PF13472 GDSL-like Lipase/Acylhydrolase family AhyD4_RS04250 PF00005 ABC transporter AhyD4_RS04260 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS04260 PF08338 Domain of unknown function (DUF1731) AhyD4_RS04265 PF00563 EAL domain AhyD4_RS04265 PF12792 CSS motif domain associated with EAL AhyD4_RS04270 PF00155 Aminotransferase class I and II AhyD4_RS04275 PF04389 Peptidase family M28 AhyD4_RS04275 PF01483 Proprotein convertase P-domain AhyD4_RS04280 PF02390 Putative methyltransferase AhyD4_RS04285 PF04320 Protein with unknown function (DUF469) AhyD4_RS04290 PF04960 Glutaminase AhyD4_RS04295 PF00581 Rhodanese-like domain AhyD4_RS04300 PF00082 Subtilase family AhyD4_RS04300 PF05922 Peptidase inhibitor I9 AhyD4_RS04305 PF06004 Bacterial protein of unknown function (DUF903) AhyD4_RS04310 PF00664 ABC transporter transmembrane region AhyD4_RS04310 PF00005 ABC transporter AhyD4_RS04315 PF00561 alpha/beta hydrolase fold AhyD4_RS04330 PF00801 PKD domain AhyD4_RS04330 PF05547 Immune inhibitor A peptidase M6 AhyD4_RS04335 PF06877 Regulator of ribonuclease activity B AhyD4_RS04340 PF00563 EAL domain AhyD4_RS04340 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS04340 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS04360 PF09905 DNA-binding protein VF530 AhyD4_RS04365 PF02666 Phosphatidylserine decarboxylase AhyD4_RS04370 PF03193 RsgA GTPase AhyD4_RS04375 PF00929 Exonuclease AhyD4_RS04410 PF00313 'Cold-shock' DNA-binding domain AhyD4_RS04420 PF00672 HAMP domain AhyD4_RS04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS04425 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhyD4_RS04430 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhyD4_RS04460 PF00704 Glycosyl hydrolases family 18 AhyD4_RS04460 PF06483 Chitinase C AhyD4_RS04475 PF02472 Biopolymer transport protein ExbD/TolR AhyD4_RS04480 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS04485 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS04495 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS04495 PF00593 TonB dependent receptor AhyD4_RS04500 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS04505 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS04515 PF00005 ABC transporter AhyD4_RS04515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS04520 PF00005 ABC transporter AhyD4_RS04520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS04525 PF01546 Peptidase family M20/M25/M40 AhyD4_RS04525 PF07687 Peptidase dimerisation domain AhyD4_RS04530 PF00156 Phosphoribosyl transferase domain AhyD4_RS04535 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AhyD4_RS04540 PF07417 Sigma factor-binding transcriptional regulator Crl AhyD4_RS04545 PF00696 Amino acid kinase family AhyD4_RS04545 PF01472 PUA domain AhyD4_RS04550 PF00171 Aldehyde dehydrogenase family AhyD4_RS04560 PF00582 Universal stress protein family AhyD4_RS04575 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS04575 PF00384 Molybdopterin oxidoreductase AhyD4_RS04575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS04575 PF04324 BFD-like [2Fe-2S] binding domain AhyD4_RS04580 PF10414 Sirohaem synthase dimerisation region AhyD4_RS04580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhyD4_RS04580 PF14824 Sirohaem biosynthesis protein central AhyD4_RS04590 PF00005 ABC transporter AhyD4_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS04600 PF00005 ABC transporter AhyD4_RS04605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhyD4_RS04605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS04605 PF13806 Rieske-like [2Fe-2S] domain AhyD4_RS04605 PF04324 BFD-like [2Fe-2S] binding domain AhyD4_RS04605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhyD4_RS04605 PF18267 Rubredoxin NAD+ reductase C-terminal domain AhyD4_RS04610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS04610 PF18267 Rubredoxin NAD+ reductase C-terminal domain AhyD4_RS04610 PF04324 BFD-like [2Fe-2S] binding domain AhyD4_RS04610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhyD4_RS04610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhyD4_RS04610 PF13806 Rieske-like [2Fe-2S] domain AhyD4_RS04615 PF00294 pfkB family carbohydrate kinase AhyD4_RS04620 PF04227 Indigoidine synthase A like protein AhyD4_RS04625 PF00194 Eukaryotic-type carbonic anhydrase AhyD4_RS04630 PF03150 Di-haem cytochrome c peroxidase AhyD4_RS04630 PF00034 Cytochrome c AhyD4_RS04665 PF00550 Phosphopantetheine attachment site AhyD4_RS04670 PF00550 Phosphopantetheine attachment site AhyD4_RS04680 PF00501 AMP-binding enzyme AhyD4_RS04680 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS04685 PF07977 FabA-like domain AhyD4_RS04695 PF00221 Aromatic amino acid lyase AhyD4_RS04720 PF02801 Beta-ketoacyl synthase, C-terminal domain AhyD4_RS04720 PF00109 Beta-ketoacyl synthase, N-terminal domain AhyD4_RS04735 PF00109 Beta-ketoacyl synthase, N-terminal domain AhyD4_RS04735 PF02801 Beta-ketoacyl synthase, C-terminal domain AhyD4_RS04745 PF00994 Probable molybdopterin binding domain AhyD4_RS04755 PF06738 Putative threonine/serine exporter AhyD4_RS04760 PF12821 Threonine/Serine exporter, ThrE AhyD4_RS04765 PF00186 Dihydrofolate reductase AhyD4_RS04770 PF00571 CBS domain AhyD4_RS04770 PF00005 ABC transporter AhyD4_RS04775 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS04780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AhyD4_RS04785 PF01507 Phosphoadenosine phosphosulfate reductase family AhyD4_RS04790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhyD4_RS04790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhyD4_RS04795 PF00258 Flavodoxin AhyD4_RS04795 PF00667 FAD binding domain AhyD4_RS04795 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS04800 PF02567 Phenazine biosynthesis-like protein AhyD4_RS04805 PF01336 OB-fold nucleic acid binding domain AhyD4_RS04805 PF00152 tRNA synthetases class II (D, K and N) AhyD4_RS04810 PF03462 PCRF domain AhyD4_RS04810 PF00472 RF-1 domain AhyD4_RS04815 PF02743 Cache domain AhyD4_RS04815 PF00672 HAMP domain AhyD4_RS04815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS04820 PF03616 Sodium/glutamate symporter AhyD4_RS04825 PF00710 Asparaginase, N-terminal AhyD4_RS04825 PF17763 Glutaminase/Asparaginase C-terminal domain AhyD4_RS04830 PF07023 Protein of unknown function (DUF1315) AhyD4_RS04835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AhyD4_RS04835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS04850 PF01343 Peptidase family S49 AhyD4_RS04855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS04855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhyD4_RS04860 PF00881 Nitroreductase family AhyD4_RS04865 PF14602 Hexapeptide repeat of succinyl-transferase AhyD4_RS04865 PF12464 Maltose acetyltransferase AhyD4_RS04870 PF01842 ACT domain AhyD4_RS04870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS04870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhyD4_RS04880 PF08240 Alcohol dehydrogenase GroES-like domain AhyD4_RS04880 PF00107 Zinc-binding dehydrogenase AhyD4_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS04885 PF03466 LysR substrate binding domain AhyD4_RS04890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AhyD4_RS04890 PF00367 phosphotransferase system, EIIB AhyD4_RS04890 PF02378 Phosphotransferase system, EIIC AhyD4_RS04895 PF00474 Sodium:solute symporter family AhyD4_RS04905 PF00289 Biotin carboxylase, N-terminal domain AhyD4_RS04905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhyD4_RS04905 PF02785 Biotin carboxylase C-terminal domain AhyD4_RS04910 PF00364 Biotin-requiring enzyme AhyD4_RS04915 PF01220 Dehydroquinase class II AhyD4_RS04920 PF16177 Acetyl-coenzyme A synthetase N-terminus AhyD4_RS04920 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS04920 PF00501 AMP-binding enzyme AhyD4_RS04930 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS04930 PF00563 EAL domain AhyD4_RS04930 PF13188 PAS domain AhyD4_RS04930 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS04950 PF02613 Nitrate reductase delta subunit AhyD4_RS04965 PF00464 Serine hydroxymethyltransferase AhyD4_RS04980 PF03477 ATP cone domain AhyD4_RS04985 PF01872 RibD C-terminal domain AhyD4_RS04985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AhyD4_RS04990 PF00677 Lumazine binding domain AhyD4_RS04995 PF00925 GTP cyclohydrolase II AhyD4_RS04995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AhyD4_RS05005 PF00885 6,7-dimethyl-8-ribityllumazine synthase AhyD4_RS05010 PF01029 NusB family AhyD4_RS05015 PF02769 AIR synthase related protein, C-terminal domain AhyD4_RS05015 PF00586 AIR synthase related protein, N-terminal domain AhyD4_RS05020 PF04608 Phosphatidylglycerophosphatase A AhyD4_RS05025 PF00005 ABC transporter AhyD4_RS05025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS05030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS05040 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS05045 PF02779 Transketolase, pyrimidine binding domain AhyD4_RS05045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AhyD4_RS05045 PF02780 Transketolase, C-terminal domain AhyD4_RS05050 PF00348 Polyprenyl synthetase AhyD4_RS05055 PF02609 Exonuclease VII small subunit AhyD4_RS05060 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS05065 PF00691 OmpA family AhyD4_RS05065 PF13677 Membrane MotB of proton-channel complex MotA/MotB AhyD4_RS05070 PF01272 Transcription elongation factor, GreA/GreB, C-term AhyD4_RS05070 PF03449 Transcription elongation factor, N-terminal AhyD4_RS05080 PF01985 CRS1 / YhbY (CRM) domain AhyD4_RS05085 PF01728 FtsJ-like methyltransferase AhyD4_RS05090 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS05090 PF01434 Peptidase family M41 AhyD4_RS05090 PF06480 FtsH Extracellular AhyD4_RS05090 PF17862 AAA+ lid domain AhyD4_RS05095 PF00809 Pterin binding enzyme AhyD4_RS05100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AhyD4_RS05100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AhyD4_RS05100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AhyD4_RS05100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhyD4_RS05105 PF00121 Triosephosphate isomerase AhyD4_RS05110 PF03840 Preprotein translocase SecG subunit AhyD4_RS05125 PF02576 RimP N-terminal domain AhyD4_RS05125 PF17384 RimP C-terminal SH3 domain AhyD4_RS05130 PF13184 NusA-like KH domain AhyD4_RS05130 PF00575 S1 RNA binding domain AhyD4_RS05130 PF08529 NusA N-terminal domain AhyD4_RS05135 PF11987 Translation-initiation factor 2 AhyD4_RS05135 PF08364 Bacterial translation initiation factor IF-2 associated region AhyD4_RS05135 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS05135 PF04760 Translation initiation factor IF-2, N-terminal region AhyD4_RS05140 PF02033 Ribosome-binding factor A AhyD4_RS05145 PF01509 TruB family pseudouridylate synthase (N terminal domain) AhyD4_RS05145 PF09157 Pseudouridine synthase II TruB, C-terminal AhyD4_RS05145 PF16198 tRNA pseudouridylate synthase B C-terminal domain AhyD4_RS05150 PF00312 Ribosomal protein S15 AhyD4_RS05155 PF00013 KH domain AhyD4_RS05155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AhyD4_RS05155 PF01138 3' exoribonuclease family, domain 1 AhyD4_RS05155 PF00575 S1 RNA binding domain AhyD4_RS05155 PF03725 3' exoribonuclease family, domain 2 AhyD4_RS05165 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS05165 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS05165 PF00563 EAL domain AhyD4_RS05170 PF02635 DsrE/DsrF-like family AhyD4_RS05180 PF10415 Fumarase C C-terminus AhyD4_RS05180 PF00206 Lyase AhyD4_RS05185 PF03575 Peptidase family S51 AhyD4_RS05190 PF02554 Carbon starvation protein CstA AhyD4_RS05190 PF13722 5TM C-terminal transporter carbon starvation CstA AhyD4_RS05195 PF00072 Response regulator receiver domain AhyD4_RS05195 PF04397 LytTr DNA-binding domain AhyD4_RS05205 PF00072 Response regulator receiver domain AhyD4_RS05205 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS05210 PF00989 PAS fold AhyD4_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS05210 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS05215 PF13247 4Fe-4S dicluster domain AhyD4_RS05220 PF03916 Polysulphide reductase, NrfD AhyD4_RS05225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS05225 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS05225 PF00384 Molybdopterin oxidoreductase AhyD4_RS05250 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AhyD4_RS05255 PF17969 L,D-transpeptidase C-terminal domain AhyD4_RS05255 PF03734 L,D-transpeptidase catalytic domain AhyD4_RS05265 PF01523 Putative modulator of DNA gyrase AhyD4_RS05270 PF01523 Putative modulator of DNA gyrase AhyD4_RS05275 PF00258 Flavodoxin AhyD4_RS05280 PF02899 Phage integrase, N-terminal SAM-like domain AhyD4_RS05280 PF00589 Phage integrase family AhyD4_RS05285 PF01741 Large-conductance mechanosensitive channel, MscL AhyD4_RS05290 PF10411 Disulfide bond isomerase protein N-terminus AhyD4_RS05290 PF13098 Thioredoxin-like domain AhyD4_RS05295 PF02272 DHHA1 domain AhyD4_RS05295 PF01368 DHH family AhyD4_RS05295 PF17768 RecJ OB domain AhyD4_RS05300 PF13411 MerR HTH family regulatory protein AhyD4_RS05315 PF02508 Rnf-Nqr subunit, membrane protein AhyD4_RS05320 PF06821 Serine hydrolase AhyD4_RS05330 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AhyD4_RS05330 PF04055 Radical SAM superfamily AhyD4_RS05335 PF03099 Biotin/lipoate A/B protein ligase family AhyD4_RS05340 PF04359 Protein of unknown function (DUF493) AhyD4_RS05345 PF07943 Penicillin-binding protein 5, C-terminal domain AhyD4_RS05345 PF00768 D-alanyl-D-alanine carboxypeptidase AhyD4_RS05350 PF03330 Lytic transglycolase AhyD4_RS05350 PF05036 Sporulation related domain AhyD4_RS05355 PF13406 Transglycosylase SLT domain AhyD4_RS05360 PF01098 Cell cycle protein AhyD4_RS05365 PF03717 Penicillin-binding Protein dimerisation domain AhyD4_RS05365 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS05370 PF02590 Predicted SPOUT methyltransferase AhyD4_RS05380 PF01467 Cytidylyltransferase-like AhyD4_RS05395 PF00133 tRNA synthetases class I (I, L, M and V) AhyD4_RS05395 PF13603 Leucyl-tRNA synthetase, Domain 2 AhyD4_RS05395 PF08264 Anticodon-binding domain of tRNA AhyD4_RS05400 PF07295 Zinc-ribbon containing domain AhyD4_RS05405 PF00795 Carbon-nitrogen hydrolase AhyD4_RS05410 PF00571 CBS domain AhyD4_RS05410 PF03471 Transporter associated domain AhyD4_RS05415 PF02130 Uncharacterized protein family UPF0054 AhyD4_RS05420 PF02562 PhoH-like protein AhyD4_RS05425 PF00919 Uncharacterized protein family UPF0004 AhyD4_RS05425 PF01938 TRAM domain AhyD4_RS05425 PF04055 Radical SAM superfamily AhyD4_RS05430 PF01494 FAD binding domain AhyD4_RS05435 PF00857 Isochorismatase family AhyD4_RS05440 PF00313 'Cold-shock' DNA-binding domain AhyD4_RS05445 PF05230 MASE2 domain AhyD4_RS05445 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS05450 PF03466 LysR substrate binding domain AhyD4_RS05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS05460 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS05470 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS05480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhyD4_RS05480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS05490 PF09997 Predicted membrane protein (DUF2238) AhyD4_RS05495 PF01132 Elongation factor P (EF-P) OB domain AhyD4_RS05495 PF08207 Elongation factor P (EF-P) KOW-like domain AhyD4_RS05495 PF09285 Elongation factor P, C-terminal AhyD4_RS05505 PF00478 IMP dehydrogenase / GMP reductase domain AhyD4_RS05515 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS05515 PF08521 Two-component sensor kinase N-terminal AhyD4_RS05520 PF00072 Response regulator receiver domain AhyD4_RS05520 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS05540 PF00501 AMP-binding enzyme AhyD4_RS05555 PF06224 Winged helix DNA-binding domain AhyD4_RS05575 PF02313 Fumarate reductase subunit D AhyD4_RS05580 PF02300 Fumarate reductase subunit C AhyD4_RS05585 PF13085 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS05585 PF13183 4Fe-4S dicluster domain AhyD4_RS05590 PF00890 FAD binding domain AhyD4_RS05590 PF02910 Fumarate reductase flavoprotein C-term AhyD4_RS05595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS05595 PF02743 Cache domain AhyD4_RS05595 PF00672 HAMP domain AhyD4_RS05600 PF03009 Glycerophosphoryl diester phosphodiesterase family AhyD4_RS05605 PF00924 Mechanosensitive ion channel AhyD4_RS05605 PF12794 Mechanosensitive ion channel inner membrane domain 1 AhyD4_RS05605 PF12795 Mechanosensitive ion channel porin domain AhyD4_RS05615 PF01551 Peptidase family M23 AhyD4_RS05615 PF08525 Opacity-associated protein A N-terminal motif AhyD4_RS05615 PF01476 LysM domain AhyD4_RS05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS05630 PF03466 LysR substrate binding domain AhyD4_RS05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS05645 PF00672 HAMP domain AhyD4_RS05645 PF02743 Cache domain AhyD4_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS05650 PF03466 LysR substrate binding domain AhyD4_RS05655 PF17092 Penicillin-binding protein OB-like domain AhyD4_RS05655 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS05655 PF00912 Transglycosylase AhyD4_RS05660 PF11104 Type IV pilus assembly protein PilM; AhyD4_RS05670 PF04350 Pilus assembly protein, PilO AhyD4_RS05680 PF07660 Secretin and TonB N terminus short domain AhyD4_RS05680 PF00263 Bacterial type II and III secretion system protein AhyD4_RS05680 PF11741 AMIN domain AhyD4_RS05680 PF03958 Bacterial type II/III secretion system short domain AhyD4_RS05685 PF01202 Shikimate kinase AhyD4_RS05690 PF01761 3-dehydroquinate synthase AhyD4_RS05700 PF02086 D12 class N6 adenine-specific DNA methyltransferase AhyD4_RS05705 PF00834 Ribulose-phosphate 3 epimerase family AhyD4_RS05710 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS05715 PF00579 tRNA synthetases class I (W and Y) AhyD4_RS05725 PF00117 Glutamine amidotransferase class-I AhyD4_RS05730 PF00202 Aminotransferase class-III AhyD4_RS05735 PF04958 Arginine N-succinyltransferase beta subunit AhyD4_RS05740 PF00171 Aldehyde dehydrogenase family AhyD4_RS05750 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS05755 PF07690 Major Facilitator Superfamily AhyD4_RS05760 PF10371 Domain of unknown function AhyD4_RS05760 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AhyD4_RS05760 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AhyD4_RS05760 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AhyD4_RS05760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS05770 PF00128 Alpha amylase, catalytic domain AhyD4_RS05770 PF16657 Maltogenic Amylase, C-terminal domain AhyD4_RS05780 PF04266 ASCH domain AhyD4_RS05790 PF01048 Phosphorylase superfamily AhyD4_RS05795 PF04973 Nicotinamide mononucleotide transporter AhyD4_RS05800 PF03600 Citrate transporter AhyD4_RS05800 PF02080 TrkA-C domain AhyD4_RS05845 PF06071 Protein of unknown function (DUF933) AhyD4_RS05845 PF01926 50S ribosome-binding GTPase AhyD4_RS05850 PF01195 Peptidyl-tRNA hydrolase AhyD4_RS05855 PF00149 Calcineurin-like phosphoesterase AhyD4_RS05855 PF02872 5'-nucleotidase, C-terminal domain AhyD4_RS05860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AhyD4_RS05860 PF14572 Phosphoribosyl synthetase-associated domain AhyD4_RS05870 PF08544 GHMP kinases C terminal AhyD4_RS05870 PF00288 GHMP kinases N terminal domain AhyD4_RS05875 PF03550 Outer membrane lipoprotein LolB AhyD4_RS05880 PF01488 Shikimate / quinate 5-dehydrogenase AhyD4_RS05880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AhyD4_RS05880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AhyD4_RS05885 PF00472 RF-1 domain AhyD4_RS05885 PF03462 PCRF domain AhyD4_RS05890 PF13847 Methyltransferase domain AhyD4_RS05890 PF17827 PrmC N-terminal domain AhyD4_RS05900 PF13369 Transglutaminase-like superfamily AhyD4_RS05905 PF00793 DAHP synthetase I family AhyD4_RS05910 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS05915 PF01228 Glycine radical AhyD4_RS05920 PF03167 Uracil DNA glycosylase superfamily AhyD4_RS05935 PF00923 Transaldolase/Fructose-6-phosphate aldolase AhyD4_RS05940 PF01235 Sodium:alanine symporter family AhyD4_RS05945 PF11992 Domain of unknown function (DUF3488) AhyD4_RS05945 PF13559 Domain of unknown function (DUF4129) AhyD4_RS05945 PF01841 Transglutaminase-like superfamily AhyD4_RS05955 PF07726 ATPase family associated with various cellular activities (AAA) AhyD4_RS05955 PF17863 AAA lid domain AhyD4_RS05960 PF00144 Beta-lactamase AhyD4_RS05965 PF00854 POT family AhyD4_RS05970 PF03652 Holliday junction resolvase AhyD4_RS05975 PF02622 Uncharacterized ACR, COG1678 AhyD4_RS05980 PF00672 HAMP domain AhyD4_RS05980 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS05980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS05985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AhyD4_RS05985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AhyD4_RS05990 PF04452 RNA methyltransferase AhyD4_RS05995 PF04231 Endonuclease I AhyD4_RS06000 PF17283 SprT-like zinc ribbon domain AhyD4_RS06000 PF10263 SprT-like family AhyD4_RS06005 PF02772 S-adenosylmethionine synthetase, central domain AhyD4_RS06005 PF00438 S-adenosylmethionine synthetase, N-terminal domain AhyD4_RS06005 PF02773 S-adenosylmethionine synthetase, C-terminal domain AhyD4_RS06010 PF00456 Transketolase, thiamine diphosphate binding domain AhyD4_RS06010 PF02780 Transketolase, C-terminal domain AhyD4_RS06010 PF02779 Transketolase, pyrimidine binding domain AhyD4_RS06020 PF00563 EAL domain AhyD4_RS06020 PF12792 CSS motif domain associated with EAL AhyD4_RS06030 PF01042 Endoribonuclease L-PSP AhyD4_RS06035 PF01965 DJ-1/PfpI family AhyD4_RS06045 PF03702 Anhydro-N-acetylmuramic acid kinase AhyD4_RS06050 PF08525 Opacity-associated protein A N-terminal motif AhyD4_RS06050 PF01476 LysM domain AhyD4_RS06050 PF01551 Peptidase family M23 AhyD4_RS06055 PF00579 tRNA synthetases class I (W and Y) AhyD4_RS06060 PF01204 Trehalase AhyD4_RS06070 PF01161 Phosphatidylethanolamine-binding protein AhyD4_RS06075 PF00709 Adenylosuccinate synthetase AhyD4_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS06080 PF03466 LysR substrate binding domain AhyD4_RS06090 PF00155 Aminotransferase class I and II AhyD4_RS06095 PF07690 Major Facilitator Superfamily AhyD4_RS06100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS06100 PF03466 LysR substrate binding domain AhyD4_RS06105 PF00106 short chain dehydrogenase AhyD4_RS06110 PF01343 Peptidase family S49 AhyD4_RS06110 PF08496 Peptidase family S49 N-terminal AhyD4_RS06115 PF04996 Succinylarginine dihydrolase AhyD4_RS06120 PF01396 Topoisomerase DNA binding C4 zinc finger AhyD4_RS06120 PF01131 DNA topoisomerase AhyD4_RS06120 PF08272 Topoisomerase I zinc-ribbon-like AhyD4_RS06120 PF01751 Toprim domain AhyD4_RS06135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS06135 PF08447 PAS fold AhyD4_RS06140 PF02838 Glycosyl hydrolase family 20, domain 2 AhyD4_RS06140 PF00728 Glycosyl hydrolase family 20, catalytic domain AhyD4_RS06145 PF01869 BadF/BadG/BcrA/BcrD ATPase family AhyD4_RS06155 PF00005 ABC transporter AhyD4_RS06155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS06160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS06160 PF00005 ABC transporter AhyD4_RS06165 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS06165 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS06170 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS06175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS06180 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS06180 PF09308 LuxQ, periplasmic AhyD4_RS06180 PF00072 Response regulator receiver domain AhyD4_RS06200 PF10725 Protein of unknown function (DUF2517) AhyD4_RS06210 PF05114 Protein of unknown function (DUF692) AhyD4_RS06230 PF13426 PAS domain AhyD4_RS06230 PF08447 PAS fold AhyD4_RS06230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS06245 PF04632 Fusaric acid resistance protein family AhyD4_RS06250 PF03453 MoeA N-terminal region (domain I and II) AhyD4_RS06250 PF00994 Probable molybdopterin binding domain AhyD4_RS06250 PF03454 MoeA C-terminal region (domain IV) AhyD4_RS06255 PF12804 MobA-like NTP transferase domain AhyD4_RS06260 PF00005 ABC transporter AhyD4_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS06270 PF12849 PBP superfamily domain AhyD4_RS06275 PF00072 Response regulator receiver domain AhyD4_RS06275 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS06275 PF00158 Sigma-54 interaction domain AhyD4_RS06280 PF00989 PAS fold AhyD4_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS06280 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS06285 PF12728 Helix-turn-helix domain AhyD4_RS06285 PF12727 PBP superfamily domain AhyD4_RS06290 PF02634 FdhD/NarQ family AhyD4_RS06325 PF00384 Molybdopterin oxidoreductase AhyD4_RS06325 PF12838 4Fe-4S dicluster domain AhyD4_RS06325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AhyD4_RS06325 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS06325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS06325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AhyD4_RS06325 PF00384 Molybdopterin oxidoreductase AhyD4_RS06325 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS06325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS06325 PF12838 4Fe-4S dicluster domain AhyD4_RS06330 PF13247 4Fe-4S dicluster domain AhyD4_RS06340 PF00072 Response regulator receiver domain AhyD4_RS06345 PF00390 Malic enzyme, N-terminal domain AhyD4_RS06345 PF03949 Malic enzyme, NAD binding domain AhyD4_RS06350 PF16998 17 kDa outer membrane surface antigen AhyD4_RS06350 PF05433 Glycine zipper 2TM domain AhyD4_RS06360 PF00860 Permease family AhyD4_RS06365 PF10282 Lactonase, 7-bladed beta-propeller AhyD4_RS06375 PF12794 Mechanosensitive ion channel inner membrane domain 1 AhyD4_RS06375 PF00924 Mechanosensitive ion channel AhyD4_RS06375 PF12795 Mechanosensitive ion channel porin domain AhyD4_RS06380 PF00224 Pyruvate kinase, barrel domain AhyD4_RS06380 PF02887 Pyruvate kinase, alpha/beta domain AhyD4_RS06390 PF04389 Peptidase family M28 AhyD4_RS06390 PF04151 Bacterial pre-peptidase C-terminal domain AhyD4_RS06395 PF02254 TrkA-N domain AhyD4_RS06395 PF00999 Sodium/hydrogen exchanger family AhyD4_RS06405 PF04381 Putative exonuclease, RdgC AhyD4_RS06415 PF00149 Calcineurin-like phosphoesterase AhyD4_RS06415 PF12320 Type 5 capsule protein repressor C-terminal domain AhyD4_RS06420 PF13476 AAA domain AhyD4_RS06435 PF01292 Prokaryotic cytochrome b561 AhyD4_RS06445 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS06450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AhyD4_RS06455 PF02896 PEP-utilising enzyme, TIM barrel domain AhyD4_RS06455 PF00391 PEP-utilising enzyme, mobile domain AhyD4_RS06455 PF05524 PEP-utilising enzyme, N-terminal AhyD4_RS06460 PF00381 PTS HPr component phosphorylation site AhyD4_RS06465 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS06470 PF02861 Clp amino terminal domain, pathogenicity island component AhyD4_RS06470 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS06470 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS06470 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS06470 PF17871 AAA lid domain AhyD4_RS06480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AhyD4_RS06480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AhyD4_RS06485 PF18389 TrmO C-terminal domain AhyD4_RS06485 PF01980 tRNA-methyltransferase O AhyD4_RS06505 PF00005 ABC transporter AhyD4_RS06505 PF00664 ABC transporter transmembrane region AhyD4_RS06510 PF00664 ABC transporter transmembrane region AhyD4_RS06510 PF00005 ABC transporter AhyD4_RS06525 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS06525 PF00072 Response regulator receiver domain AhyD4_RS06535 PF03737 Aldolase/RraA AhyD4_RS06550 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AhyD4_RS06555 PF00588 SpoU rRNA Methylase family AhyD4_RS06560 PF01842 ACT domain AhyD4_RS06560 PF03447 Homoserine dehydrogenase, NAD binding domain AhyD4_RS06560 PF00742 Homoserine dehydrogenase AhyD4_RS06560 PF13840 ACT domain AhyD4_RS06560 PF00696 Amino acid kinase family AhyD4_RS06565 PF08544 GHMP kinases C terminal AhyD4_RS06565 PF00288 GHMP kinases N terminal domain AhyD4_RS06570 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS06570 PF14821 Threonine synthase N terminus AhyD4_RS06575 PF13474 SnoaL-like domain AhyD4_RS06590 PF00005 ABC transporter AhyD4_RS06590 PF12848 ABC transporter AhyD4_RS06600 PF01048 Phosphorylase superfamily AhyD4_RS06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS06615 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS06615 PF01627 Hpt domain AhyD4_RS06615 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS06615 PF00989 PAS fold AhyD4_RS06615 PF00072 Response regulator receiver domain AhyD4_RS06620 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AhyD4_RS06625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS06625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AhyD4_RS06630 PF02690 Na+/Pi-cotransporter AhyD4_RS06640 PF13520 Amino acid permease AhyD4_RS06650 PF00324 Amino acid permease AhyD4_RS06655 PF00202 Aminotransferase class-III AhyD4_RS06660 PF00171 Aldehyde dehydrogenase family AhyD4_RS06665 PF01381 Helix-turn-helix AhyD4_RS06665 PF07883 Cupin domain AhyD4_RS06670 PF01266 FAD dependent oxidoreductase AhyD4_RS06685 PF00816 H-NS histone family AhyD4_RS06690 PF00793 DAHP synthetase I family AhyD4_RS06700 PF08021 Siderophore-interacting FAD-binding domain AhyD4_RS06700 PF04954 Siderophore-interacting protein AhyD4_RS06705 PF02321 Outer membrane efflux protein AhyD4_RS06710 PF00005 ABC transporter AhyD4_RS06710 PF02687 FtsX-like permease family AhyD4_RS06710 PF12704 MacB-like periplasmic core domain AhyD4_RS06715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS06725 PF01368 DHH family AhyD4_RS06725 PF02833 DHHA2 domain AhyD4_RS06735 PF02463 RecF/RecN/SMC N terminal domain AhyD4_RS06740 PF01513 ATP-NAD kinase AhyD4_RS06745 PF01025 GrpE AhyD4_RS06750 PF00012 Hsp70 protein AhyD4_RS06755 PF00684 DnaJ central domain AhyD4_RS06755 PF00226 DnaJ domain AhyD4_RS06755 PF01556 DnaJ C terminal domain AhyD4_RS06760 PF02264 LamB porin AhyD4_RS06760 PF11471 Maltoporin periplasmic N-terminal extension AhyD4_RS06765 PF00294 pfkB family carbohydrate kinase AhyD4_RS06770 PF00367 phosphotransferase system, EIIB AhyD4_RS06770 PF02378 Phosphotransferase system, EIIC AhyD4_RS06775 PF08244 Glycosyl hydrolases family 32 C terminal AhyD4_RS06775 PF00251 Glycosyl hydrolases family 32 N-terminal domain AhyD4_RS06780 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS06780 PF13407 Periplasmic binding protein domain AhyD4_RS06785 PF02308 MgtC family AhyD4_RS06800 PF01022 Bacterial regulatory protein, arsR family AhyD4_RS06805 PF04143 Sulphur transport AhyD4_RS06820 PF00873 AcrB/AcrD/AcrF family AhyD4_RS06825 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS06825 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS06825 PF00563 EAL domain AhyD4_RS06830 PF03099 Biotin/lipoate A/B protein ligase family AhyD4_RS06830 PF10437 Bacterial lipoate protein ligase C-terminus AhyD4_RS06850 PF00873 AcrB/AcrD/AcrF family AhyD4_RS06855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS06855 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS06865 PF00873 AcrB/AcrD/AcrF family AhyD4_RS06870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS06875 PF03372 Endonuclease/Exonuclease/phosphatase family AhyD4_RS06890 PF07690 Major Facilitator Superfamily AhyD4_RS06895 PF02424 ApbE family AhyD4_RS06900 PF00127 Copper binding proteins, plastocyanin/azurin family AhyD4_RS06915 PF01156 Inosine-uridine preferring nucleoside hydrolase AhyD4_RS06925 PF00034 Cytochrome c AhyD4_RS06925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AhyD4_RS06935 PF06481 COX Aromatic Rich Motif AhyD4_RS06935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AhyD4_RS06940 PF00115 Cytochrome C and Quinol oxidase polypeptide I AhyD4_RS06945 PF00510 Cytochrome c oxidase subunit III AhyD4_RS06950 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AhyD4_RS06955 PF01040 UbiA prenyltransferase family AhyD4_RS06960 PF07690 Major Facilitator Superfamily AhyD4_RS06970 PF01627 Hpt domain AhyD4_RS06970 PF00072 Response regulator receiver domain AhyD4_RS06970 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS06970 PF00672 HAMP domain AhyD4_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS06975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS06985 PF00072 Response regulator receiver domain AhyD4_RS06985 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS06995 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS06995 PF18364 Molybdopterin oxidoreductase N-terminal domain AhyD4_RS06995 PF00384 Molybdopterin oxidoreductase AhyD4_RS07000 PF02613 Nitrate reductase delta subunit AhyD4_RS07040 PF04002 RadC-like JAB domain AhyD4_RS07080 PF03466 LysR substrate binding domain AhyD4_RS07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS07095 PF00696 Amino acid kinase family AhyD4_RS07100 PF06545 Protein of unknown function (DUF1116) AhyD4_RS07105 PF02629 CoA binding domain AhyD4_RS07105 PF00549 CoA-ligase AhyD4_RS07110 PF00857 Isochorismatase family AhyD4_RS07125 PF05930 Prophage CP4-57 regulatory protein (AlpA) AhyD4_RS07145 PF01773 Na+ dependent nucleoside transporter N-terminus AhyD4_RS07145 PF07670 Nucleoside recognition AhyD4_RS07145 PF07662 Na+ dependent nucleoside transporter C-terminus AhyD4_RS07175 PF00290 Tryptophan synthase alpha chain AhyD4_RS07180 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS07185 PF00218 Indole-3-glycerol phosphate synthase AhyD4_RS07185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AhyD4_RS07190 PF00591 Glycosyl transferase family, a/b domain AhyD4_RS07190 PF02885 Glycosyl transferase family, helical bundle domain AhyD4_RS07195 PF00591 Glycosyl transferase family, a/b domain AhyD4_RS07195 PF00117 Glutamine amidotransferase class-I AhyD4_RS07195 PF02885 Glycosyl transferase family, helical bundle domain AhyD4_RS07200 PF04715 Anthranilate synthase component I, N terminal region AhyD4_RS07200 PF00425 chorismate binding enzyme AhyD4_RS07205 PF02811 PHP domain AhyD4_RS07210 PF01300 Telomere recombination AhyD4_RS07215 PF02616 Segregation and condensation protein ScpA AhyD4_RS07220 PF04079 Segregation and condensation complex subunit ScpB AhyD4_RS07225 PF00849 RNA pseudouridylate synthase AhyD4_RS07225 PF01479 S4 domain AhyD4_RS07245 PF08361 MAATS-type transcriptional repressor, C-terminal region AhyD4_RS07245 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS07250 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS07250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS07255 PF00873 AcrB/AcrD/AcrF family AhyD4_RS07260 PF16363 GDP-mannose 4,6 dehydratase AhyD4_RS07265 PF00483 Nucleotidyl transferase AhyD4_RS07270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AhyD4_RS07275 PF01943 Polysaccharide biosynthesis protein AhyD4_RS07290 PF16363 GDP-mannose 4,6 dehydratase AhyD4_RS07295 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS07300 PF00483 Nucleotidyl transferase AhyD4_RS07300 PF01050 Mannose-6-phosphate isomerase AhyD4_RS07305 PF00535 Glycosyl transferase family 2 AhyD4_RS07315 PF00953 Glycosyl transferase family 4 AhyD4_RS07320 PF04321 RmlD substrate binding domain AhyD4_RS07325 PF00483 Nucleotidyl transferase AhyD4_RS07335 PF02706 Chain length determinant protein AhyD4_RS07355 PF06082 Exopolysaccharide biosynthesis protein YbjH AhyD4_RS07365 PF04337 Protein of unknown function, DUF480 AhyD4_RS07370 PF00271 Helicase conserved C-terminal domain AhyD4_RS07370 PF00176 SNF2 family N-terminal domain AhyD4_RS07370 PF04434 SWIM zinc finger AhyD4_RS07375 PF05472 DNA replication terminus site-binding protein (Ter protein) AhyD4_RS07385 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AhyD4_RS07390 PF00676 Dehydrogenase E1 component AhyD4_RS07395 PF02779 Transketolase, pyrimidine binding domain AhyD4_RS07395 PF02780 Transketolase, C-terminal domain AhyD4_RS07400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AhyD4_RS07400 PF02817 e3 binding domain AhyD4_RS07400 PF00364 Biotin-requiring enzyme AhyD4_RS07405 PF00313 'Cold-shock' DNA-binding domain AhyD4_RS07430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS07435 PF00892 EamA-like transporter family AhyD4_RS07440 PF08220 DeoR-like helix-turn-helix domain AhyD4_RS07440 PF00455 DeoR C terminal sensor domain AhyD4_RS07445 PF01228 Glycine radical AhyD4_RS07445 PF02901 Pyruvate formate lyase-like AhyD4_RS07450 PF04055 Radical SAM superfamily AhyD4_RS07455 PF00923 Transaldolase/Fructose-6-phosphate aldolase AhyD4_RS07465 PF01966 HD domain AhyD4_RS07465 PF11871 Domain of unknown function (DUF3391) AhyD4_RS07470 PF00849 RNA pseudouridylate synthase AhyD4_RS07470 PF01479 S4 domain AhyD4_RS07480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS07485 PF12850 Calcineurin-like phosphoesterase superfamily domain AhyD4_RS07500 PF13144 Chaperone for flagella basal body P-ring formation AhyD4_RS07505 PF00072 Response regulator receiver domain AhyD4_RS07505 PF01584 CheW-like domain AhyD4_RS07510 PF01739 CheR methyltransferase, SAM binding domain AhyD4_RS07510 PF03705 CheR methyltransferase, all-alpha domain AhyD4_RS07515 PF00460 Flagella basal body rod protein AhyD4_RS07520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AhyD4_RS07520 PF00460 Flagella basal body rod protein AhyD4_RS07530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AhyD4_RS07530 PF00460 Flagella basal body rod protein AhyD4_RS07530 PF07559 Flagellar basal body protein FlaE AhyD4_RS07535 PF00460 Flagella basal body rod protein AhyD4_RS07535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AhyD4_RS07540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AhyD4_RS07540 PF00460 Flagella basal body rod protein AhyD4_RS07545 PF02107 Flagellar L-ring protein AhyD4_RS07550 PF02119 Flagellar P-ring protein AhyD4_RS07555 PF10135 Rod binding protein AhyD4_RS07555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AhyD4_RS07560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AhyD4_RS07560 PF00460 Flagella basal body rod protein AhyD4_RS07565 PF00669 Bacterial flagellin N-terminal helical region AhyD4_RS07570 PF00571 CBS domain AhyD4_RS07570 PF01769 Divalent cation transporter AhyD4_RS07570 PF03448 MgtE intracellular N domain AhyD4_RS07575 PF02541 Ppx/GppA phosphatase family AhyD4_RS07580 PF13090 Polyphosphate kinase C-terminal domain 2 AhyD4_RS07580 PF17941 Polyphosphate kinase C-terminal domain 1 AhyD4_RS07580 PF02503 Polyphosphate kinase middle domain AhyD4_RS07580 PF13089 Polyphosphate kinase N-terminal domain AhyD4_RS07585 PF01842 ACT domain AhyD4_RS07595 PF00158 Sigma-54 interaction domain AhyD4_RS07595 PF06490 Flagellar regulatory protein FleQ AhyD4_RS07595 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS07600 PF13188 PAS domain AhyD4_RS07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS07600 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS07605 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS07605 PF00158 Sigma-54 interaction domain AhyD4_RS07605 PF00072 Response regulator receiver domain AhyD4_RS07610 PF01784 NIF3 (NGG1p interacting factor 3) AhyD4_RS07615 PF00551 Formyl transferase AhyD4_RS07620 PF00586 AIR synthase related protein, N-terminal domain AhyD4_RS07620 PF02769 AIR synthase related protein, C-terminal domain AhyD4_RS07635 PF00308 Bacterial dnaA protein AhyD4_RS07640 PF00463 Isocitrate lyase family AhyD4_RS07645 PF01274 Malate synthase AhyD4_RS07655 PF14437 MafB19-like deaminase AhyD4_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS07670 PF00005 ABC transporter AhyD4_RS07675 PF01895 PhoU domain AhyD4_RS07680 PF00571 CBS domain AhyD4_RS07680 PF03471 Transporter associated domain AhyD4_RS07680 PF01595 Cyclin M transmembrane N-terminal domain AhyD4_RS07690 PF02574 Homocysteine S-methyltransferase AhyD4_RS07690 PF02310 B12 binding domain AhyD4_RS07690 PF02607 B12 binding domain AhyD4_RS07690 PF00809 Pterin binding enzyme AhyD4_RS07690 PF02965 Vitamin B12 dependent methionine synthase, activation domain AhyD4_RS07695 PF13520 Amino acid permease AhyD4_RS07700 PF04116 Fatty acid hydroxylase superfamily AhyD4_RS07710 PF00005 ABC transporter AhyD4_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS07725 PF17151 Periplasmic sensor domain AhyD4_RS07725 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS07730 PF07690 Major Facilitator Superfamily AhyD4_RS07735 PF05231 MASE1 AhyD4_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS07735 PF07730 Histidine kinase AhyD4_RS07740 PF00072 Response regulator receiver domain AhyD4_RS07740 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS07745 PF01272 Transcription elongation factor, GreA/GreB, C-term AhyD4_RS07745 PF14760 Rnk N-terminus AhyD4_RS07765 PF00245 Alkaline phosphatase AhyD4_RS07770 PF00245 Alkaline phosphatase AhyD4_RS07775 PF01926 50S ribosome-binding GTPase AhyD4_RS07780 PF07690 Major Facilitator Superfamily AhyD4_RS07785 PF00850 Histone deacetylase domain AhyD4_RS07795 PF06733 DEAD_2 AhyD4_RS07795 PF13307 Helicase C-terminal domain AhyD4_RS07800 PF13609 Gram-negative porin AhyD4_RS07810 PF00155 Aminotransferase class I and II AhyD4_RS07815 PF05872 Bacterial protein of unknown function (DUF853) AhyD4_RS07880 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS07880 PF00155 Aminotransferase class I and II AhyD4_RS07885 PF00701 Dihydrodipicolinate synthetase family AhyD4_RS07895 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS07920 PF09722 Protein of unknown function (DUF2384) AhyD4_RS07925 PF00816 H-NS histone family AhyD4_RS07960 PF03772 Competence protein AhyD4_RS07960 PF00753 Metallo-beta-lactamase superfamily AhyD4_RS07965 PF00005 ABC transporter AhyD4_RS07965 PF00664 ABC transporter transmembrane region AhyD4_RS07970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AhyD4_RS07975 PF03966 Trm112p-like protein AhyD4_RS07980 PF02348 Cytidylyltransferase AhyD4_RS07985 PF00072 Response regulator receiver domain AhyD4_RS07985 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS07990 PF08459 UvrC Helix-hairpin-helix N-terminal AhyD4_RS07990 PF02151 UvrB/uvrC motif AhyD4_RS07990 PF01541 GIY-YIG catalytic domain AhyD4_RS07995 PF01066 CDP-alcohol phosphatidyltransferase AhyD4_RS08015 PF13356 Arm DNA-binding domain AhyD4_RS08015 PF00589 Phage integrase family AhyD4_RS08040 PF03050 Transposase IS66 family AhyD4_RS08040 PF13817 IS66 C-terminal element AhyD4_RS08040 PF13005 zinc-finger binding domain of transposase IS66 AhyD4_RS08040 PF13007 Transposase C of IS166 homeodomain AhyD4_RS08050 PF00171 Aldehyde dehydrogenase family AhyD4_RS08060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhyD4_RS08060 PF00205 Thiamine pyrophosphate enzyme, central domain AhyD4_RS08060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS08065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhyD4_RS08065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AhyD4_RS08070 PF13407 Periplasmic binding protein domain AhyD4_RS08075 PF00005 ABC transporter AhyD4_RS08080 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS08085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AhyD4_RS08085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhyD4_RS08090 PF00294 pfkB family carbohydrate kinase AhyD4_RS08095 PF01261 Xylose isomerase-like TIM barrel AhyD4_RS08100 PF04962 KduI/IolB family AhyD4_RS08105 PF05598 Transposase domain (DUF772) AhyD4_RS08105 PF01609 Transposase DDE domain AhyD4_RS08110 PF01527 Transposase AhyD4_RS08115 PF00665 Integrase core domain AhyD4_RS08115 PF13276 HTH-like domain AhyD4_RS08150 PF01757 Acyltransferase family AhyD4_RS08160 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB AhyD4_RS08165 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AhyD4_RS08185 PF00037 4Fe-4S binding domain AhyD4_RS08185 PF13247 4Fe-4S dicluster domain AhyD4_RS08190 PF03916 Polysulphide reductase, NrfD AhyD4_RS08195 PF00149 Calcineurin-like phosphoesterase AhyD4_RS08205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AhyD4_RS08210 PF09190 DALR domain AhyD4_RS08210 PF01406 tRNA synthetases class I (C) catalytic domain AhyD4_RS08225 PF13185 GAF domain AhyD4_RS08225 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS08255 PF01169 Uncharacterized protein family UPF0016 AhyD4_RS08260 PF01253 Translation initiation factor SUI1 AhyD4_RS08270 PF07670 Nucleoside recognition AhyD4_RS08270 PF07664 Ferrous iron transport protein B C terminus AhyD4_RS08270 PF02421 Ferrous iron transport protein B AhyD4_RS08285 PF00483 Nucleotidyl transferase AhyD4_RS08290 PF00437 Type II/IV secretion system protein AhyD4_RS08300 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS08300 PF00989 PAS fold AhyD4_RS08300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS08300 PF00072 Response regulator receiver domain AhyD4_RS08300 PF01627 Hpt domain AhyD4_RS08300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS08305 PF01032 FecCD transport family AhyD4_RS08310 PF00005 ABC transporter AhyD4_RS08315 PF00583 Acetyltransferase (GNAT) family AhyD4_RS08320 PF00793 DAHP synthetase I family AhyD4_RS08325 PF01219 Prokaryotic diacylglycerol kinase AhyD4_RS08330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS08330 PF01842 ACT domain AhyD4_RS08330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhyD4_RS08335 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AhyD4_RS08340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AhyD4_RS08345 PF01812 5-formyltetrahydrofolate cyclo-ligase family AhyD4_RS08355 PF01113 Dihydrodipicolinate reductase, N-terminus AhyD4_RS08355 PF05173 Dihydrodipicolinate reductase, C-terminus AhyD4_RS08360 PF00117 Glutamine amidotransferase class-I AhyD4_RS08360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AhyD4_RS08365 PF02142 MGS-like domain AhyD4_RS08365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhyD4_RS08365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AhyD4_RS08370 PF00682 HMGL-like AhyD4_RS08370 PF08502 LeuA allosteric (dimerisation) domain AhyD4_RS08375 PF07759 Protein of unknown function (DUF1615) AhyD4_RS08400 PF13302 Acetyltransferase (GNAT) domain AhyD4_RS08405 PF00270 DEAD/DEAH box helicase AhyD4_RS08405 PF00271 Helicase conserved C-terminal domain AhyD4_RS08415 PF14521 Lysine-specific metallo-endopeptidase AhyD4_RS08430 PF00376 MerR family regulatory protein AhyD4_RS08430 PF09278 MerR, DNA binding AhyD4_RS08445 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS08455 PF00005 ABC transporter AhyD4_RS08460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AhyD4_RS08460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS08465 PF01645 Conserved region in glutamate synthase AhyD4_RS08465 PF04898 Glutamate synthase central domain AhyD4_RS08465 PF01493 GXGXG motif AhyD4_RS08465 PF00310 Glutamine amidotransferases class-II AhyD4_RS08470 PF16199 Radical_SAM C-terminal domain AhyD4_RS08470 PF04055 Radical SAM superfamily AhyD4_RS08475 PF00664 ABC transporter transmembrane region AhyD4_RS08475 PF00005 ABC transporter AhyD4_RS08475 PF03412 Peptidase C39 family AhyD4_RS08525 PF00324 Amino acid permease AhyD4_RS08535 PF03618 Kinase/pyrophosphorylase AhyD4_RS08540 PF00391 PEP-utilising enzyme, mobile domain AhyD4_RS08540 PF02896 PEP-utilising enzyme, TIM barrel domain AhyD4_RS08540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AhyD4_RS08550 PF00933 Glycosyl hydrolase family 3 N terminal domain AhyD4_RS08550 PF01915 Glycosyl hydrolase family 3 C-terminal domain AhyD4_RS08550 PF14310 Fibronectin type III-like domain AhyD4_RS08560 PF01483 Proprotein convertase P-domain AhyD4_RS08560 PF00082 Subtilase family AhyD4_RS08580 PF07969 Amidohydrolase family AhyD4_RS08585 PF03180 NLPA lipoprotein AhyD4_RS08590 PF01569 PAP2 superfamily AhyD4_RS08595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhyD4_RS08595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhyD4_RS08595 PF11890 Domain of unknown function (DUF3410) AhyD4_RS08600 PF01118 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS08600 PF02774 Semialdehyde dehydrogenase, dimerisation domain AhyD4_RS08610 PF01416 tRNA pseudouridine synthase AhyD4_RS08615 PF01039 Carboxyl transferase domain AhyD4_RS08615 PF17848 Acetyl-coA carboxylase zinc finger domain AhyD4_RS08620 PF08245 Mur ligase middle domain AhyD4_RS08620 PF02875 Mur ligase family, glutamate ligase domain AhyD4_RS08625 PF05036 Sporulation related domain AhyD4_RS08630 PF04358 DsrC like protein AhyD4_RS08635 PF12805 FUSC-like inner membrane protein yccS AhyD4_RS08640 PF01027 Inhibitor of apoptosis-promoting Bax1 AhyD4_RS08660 PF00884 Sulfatase AhyD4_RS08660 PF08019 Phosphoethanolamine transferase EptA/EptB AhyD4_RS08670 PF09924 Uncharacterised conserved protein (DUF2156) AhyD4_RS08670 PF03706 Lysylphosphatidylglycerol synthase TM region AhyD4_RS08680 PF08447 PAS fold AhyD4_RS08680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS08685 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS08685 PF13426 PAS domain AhyD4_RS08685 PF00563 EAL domain AhyD4_RS08690 PF00849 RNA pseudouridylate synthase AhyD4_RS08700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS08705 PF04209 homogentisate 1,2-dioxygenase AhyD4_RS08715 PF14497 Glutathione S-transferase, C-terminal domain AhyD4_RS08715 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS08720 PF00043 Glutathione S-transferase, C-terminal domain AhyD4_RS08720 PF13417 Glutathione S-transferase, N-terminal domain AhyD4_RS08730 PF00733 Asparagine synthase AhyD4_RS08730 PF13537 Glutamine amidotransferase domain AhyD4_RS08740 PF02254 TrkA-N domain AhyD4_RS08740 PF00999 Sodium/hydrogen exchanger family AhyD4_RS08745 PF13344 Haloacid dehalogenase-like hydrolase AhyD4_RS08750 PF00962 Adenosine/AMP deaminase AhyD4_RS08755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhyD4_RS08760 PF03741 Integral membrane protein TerC family AhyD4_RS08760 PF03471 Transporter associated domain AhyD4_RS08770 PF13183 4Fe-4S dicluster domain AhyD4_RS08770 PF02913 FAD linked oxidases, C-terminal domain AhyD4_RS08770 PF01565 FAD binding domain AhyD4_RS08780 PF03061 Thioesterase superfamily AhyD4_RS08785 PF03880 DbpA RNA binding domain AhyD4_RS08785 PF00270 DEAD/DEAH box helicase AhyD4_RS08785 PF00271 Helicase conserved C-terminal domain AhyD4_RS08790 PF03553 Na+/H+ antiporter family AhyD4_RS08790 PF13726 Na+-H+ antiporter family AhyD4_RS08795 PF00929 Exonuclease AhyD4_RS08800 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS08800 PF00672 HAMP domain AhyD4_RS08800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS08805 PF00691 OmpA family AhyD4_RS08805 PF18393 MotY N-terminal domain AhyD4_RS08810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS08815 PF00633 Helix-hairpin-helix motif AhyD4_RS08815 PF00730 HhH-GPD superfamily base excision DNA repair protein AhyD4_RS08815 PF10576 Iron-sulfur binding domain of endonuclease III AhyD4_RS08820 PF02508 Rnf-Nqr subunit, membrane protein AhyD4_RS08825 PF04205 FMN-binding domain AhyD4_RS08830 PF03116 NQR2, RnfD, RnfE family AhyD4_RS08835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AhyD4_RS08835 PF13375 RnfC Barrel sandwich hybrid domain AhyD4_RS08835 PF12838 4Fe-4S dicluster domain AhyD4_RS08835 PF10531 SLBB domain AhyD4_RS08840 PF04060 Putative Fe-S cluster AhyD4_RS08845 PF02508 Rnf-Nqr subunit, membrane protein AhyD4_RS08850 PF00892 EamA-like transporter family AhyD4_RS08860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS08860 PF08447 PAS fold AhyD4_RS08860 PF13426 PAS domain AhyD4_RS08865 PF07055 Enoyl reductase FAD binding domain AhyD4_RS08865 PF12241 Trans-2-enoyl-CoA reductase catalytic region AhyD4_RS08865 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AhyD4_RS08870 PF03606 C4-dicarboxylate anaerobic carrier AhyD4_RS08875 PF00155 Aminotransferase class I and II AhyD4_RS08885 PF00462 Glutaredoxin AhyD4_RS08890 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AhyD4_RS08895 PF04851 Type III restriction enzyme, res subunit AhyD4_RS08895 PF00271 Helicase conserved C-terminal domain AhyD4_RS08900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS08900 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS08905 PF11742 Protein of unknown function (DUF3302) AhyD4_RS08910 PF02554 Carbon starvation protein CstA AhyD4_RS08915 PF00072 Response regulator receiver domain AhyD4_RS08915 PF04397 LytTr DNA-binding domain AhyD4_RS08920 PF06580 Histidine kinase AhyD4_RS08920 PF07694 5TMR of 5TMR-LYT AhyD4_RS08925 PF01966 HD domain AhyD4_RS08930 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS08930 PF00171 Aldehyde dehydrogenase family AhyD4_RS08940 PF01914 MarC family integral membrane protein AhyD4_RS08945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS08950 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS08955 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS08955 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS08960 PF00005 ABC transporter AhyD4_RS08960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS08970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS08970 PF00005 ABC transporter AhyD4_RS08975 PF03741 Integral membrane protein TerC family AhyD4_RS08980 PF00842 Alanine racemase, C-terminal domain AhyD4_RS08980 PF01168 Alanine racemase, N-terminal domain AhyD4_RS08990 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS09005 PF01979 Amidohydrolase family AhyD4_RS09015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS09015 PF00672 HAMP domain AhyD4_RS09020 PF01230 HIT domain AhyD4_RS09055 PF07549 SecD/SecF GG Motif AhyD4_RS09055 PF13721 SecD export protein N-terminal TM region AhyD4_RS09055 PF02355 Protein export membrane protein AhyD4_RS09060 PF02355 Protein export membrane protein AhyD4_RS09060 PF07549 SecD/SecF GG Motif AhyD4_RS09070 PF05661 Protein of unknown function (DUF808) AhyD4_RS09075 PF08439 Oligopeptidase F AhyD4_RS09075 PF01432 Peptidase family M3 AhyD4_RS09080 PF08439 Oligopeptidase F AhyD4_RS09080 PF01432 Peptidase family M3 AhyD4_RS09085 PF00860 Permease family AhyD4_RS09090 PF05728 Uncharacterised protein family (UPF0227) AhyD4_RS09095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS09115 PF01906 Putative heavy-metal-binding AhyD4_RS09125 PF10414 Sirohaem synthase dimerisation region AhyD4_RS09125 PF14824 Sirohaem biosynthesis protein central AhyD4_RS09125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhyD4_RS09130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhyD4_RS09130 PF13187 4Fe-4S dicluster domain AhyD4_RS09130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhyD4_RS09135 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS09135 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AhyD4_RS09140 PF17179 4Fe-4S dicluster domain AhyD4_RS09145 PF01734 Patatin-like phospholipase AhyD4_RS09150 PF17676 LD-carboxypeptidase C-terminal domain AhyD4_RS09150 PF02016 LD-carboxypeptidase N-terminal domain AhyD4_RS09155 PF00884 Sulfatase AhyD4_RS09165 PF01842 ACT domain AhyD4_RS09165 PF00696 Amino acid kinase family AhyD4_RS09170 PF00696 Amino acid kinase family AhyD4_RS09170 PF00583 Acetyltransferase (GNAT) family AhyD4_RS09175 PF01625 Peptide methionine sulfoxide reductase AhyD4_RS09200 PF00561 alpha/beta hydrolase fold AhyD4_RS09205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS09215 PF03466 LysR substrate binding domain AhyD4_RS09220 PF02652 L-lactate permease AhyD4_RS09225 PF02754 Cysteine-rich domain AhyD4_RS09230 PF11870 Domain of unknown function (DUF3390) AhyD4_RS09230 PF13183 4Fe-4S dicluster domain AhyD4_RS09230 PF02589 LUD domain AhyD4_RS09235 PF02589 LUD domain AhyD4_RS09240 PF02913 FAD linked oxidases, C-terminal domain AhyD4_RS09240 PF01565 FAD binding domain AhyD4_RS09250 PF02687 FtsX-like permease family AhyD4_RS09250 PF12704 MacB-like periplasmic core domain AhyD4_RS09255 PF00005 ABC transporter AhyD4_RS09265 PF07690 Major Facilitator Superfamily AhyD4_RS09280 PF01593 Flavin containing amine oxidoreductase AhyD4_RS09285 PF03239 Iron permease FTR1 family AhyD4_RS09300 PF03350 Uncharacterized protein family, UPF0114 AhyD4_RS09315 PF01740 STAS domain AhyD4_RS09315 PF00916 Sulfate permease family AhyD4_RS09350 PF01527 Transposase AhyD4_RS09360 PF01527 Transposase AhyD4_RS09370 PF13276 HTH-like domain AhyD4_RS09370 PF00665 Integrase core domain AhyD4_RS09370 PF13333 Integrase core domain AhyD4_RS09385 PF00842 Alanine racemase, C-terminal domain AhyD4_RS09385 PF01168 Alanine racemase, N-terminal domain AhyD4_RS09390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS09390 PF00672 HAMP domain AhyD4_RS09390 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS09395 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS09395 PF00563 EAL domain AhyD4_RS09395 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS09400 PF00072 Response regulator receiver domain AhyD4_RS09400 PF01339 CheB methylesterase AhyD4_RS09405 PF01739 CheR methyltransferase, SAM binding domain AhyD4_RS09405 PF03705 CheR methyltransferase, all-alpha domain AhyD4_RS09410 PF01584 CheW-like domain AhyD4_RS09415 PF17202 Single cache domain 3 AhyD4_RS09415 PF00672 HAMP domain AhyD4_RS09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS09420 PF01627 Hpt domain AhyD4_RS09420 PF09078 CheY binding AhyD4_RS09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS09420 PF01584 CheW-like domain AhyD4_RS09420 PF02895 Signal transducing histidine kinase, homodimeric domain AhyD4_RS09430 PF00072 Response regulator receiver domain AhyD4_RS09435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AhyD4_RS09435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AhyD4_RS09440 PF13247 4Fe-4S dicluster domain AhyD4_RS09445 PF03916 Polysulphide reductase, NrfD AhyD4_RS09450 PF00374 Nickel-dependent hydrogenase AhyD4_RS09455 PF01750 Hydrogenase maturation protease AhyD4_RS09460 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AhyD4_RS09465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS09475 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS09480 PF00005 ABC transporter AhyD4_RS09480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS09485 PF08402 TOBE domain AhyD4_RS09485 PF00005 ABC transporter AhyD4_RS09490 PF02492 CobW/HypB/UreG, nucleotide-binding domain AhyD4_RS09495 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AhyD4_RS09500 PF00586 AIR synthase related protein, N-terminal domain AhyD4_RS09500 PF02769 AIR synthase related protein, C-terminal domain AhyD4_RS09505 PF01924 Hydrogenase formation hypA family AhyD4_RS09510 PF01455 HupF/HypC family AhyD4_RS09515 PF01300 Telomere recombination AhyD4_RS09515 PF07503 HypF finger AhyD4_RS09515 PF17788 HypF Kae1-like domain AhyD4_RS09515 PF00708 Acylphosphatase AhyD4_RS09520 PF09105 Elongation factor SelB, winged helix AhyD4_RS09520 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS09520 PF09106 Elongation factor SelB, winged helix AhyD4_RS09520 PF03144 Elongation factor Tu domain 2 AhyD4_RS09520 PF09107 Elongation factor SelB, winged helix AhyD4_RS09525 PF12390 Selenocysteine synthase N terminal AhyD4_RS09525 PF03841 L-seryl-tRNA selenium transferase AhyD4_RS09530 PF01750 Hydrogenase maturation protease AhyD4_RS09535 PF07450 Formate hydrogenlyase maturation protein HycH AhyD4_RS09540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AhyD4_RS09545 PF12838 4Fe-4S dicluster domain AhyD4_RS09550 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AhyD4_RS09550 PF00374 Nickel-dependent hydrogenase AhyD4_RS09550 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AhyD4_RS09555 PF00146 NADH dehydrogenase AhyD4_RS09560 PF00361 Proton-conducting membrane transporter AhyD4_RS09565 PF00037 4Fe-4S binding domain AhyD4_RS09565 PF12798 4Fe-4S binding domain AhyD4_RS09570 PF02705 K+ potassium transporter AhyD4_RS09575 PF12800 4Fe-4S binding domain AhyD4_RS09575 PF13247 4Fe-4S dicluster domain AhyD4_RS09580 PF00384 Molybdopterin oxidoreductase AhyD4_RS09580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS09580 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS09585 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS09585 PF00384 Molybdopterin oxidoreductase AhyD4_RS09585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS09595 PF01590 GAF domain AhyD4_RS09595 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS09595 PF00158 Sigma-54 interaction domain AhyD4_RS09600 PF02634 FdhD/NarQ family AhyD4_RS09605 PF02132 RecR protein AhyD4_RS09605 PF13662 Toprim domain AhyD4_RS09610 PF00183 Hsp90 protein AhyD4_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS09615 PF05191 Adenylate kinase, active site lid AhyD4_RS09620 PF00762 Ferrochelatase AhyD4_RS09630 PF00294 pfkB family carbohydrate kinase AhyD4_RS09650 PF00483 Nucleotidyl transferase AhyD4_RS09660 PF07273 Protein of unknown function (DUF1439) AhyD4_RS09665 PF00425 chorismate binding enzyme AhyD4_RS09670 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS09670 PF00501 AMP-binding enzyme AhyD4_RS09675 PF00550 Phosphopantetheine attachment site AhyD4_RS09675 PF00857 Isochorismatase family AhyD4_RS09680 PF00975 Thioesterase domain AhyD4_RS09680 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS09680 PF00501 AMP-binding enzyme AhyD4_RS09680 PF00550 Phosphopantetheine attachment site AhyD4_RS09680 PF00668 Condensation domain AhyD4_RS09690 PF07993 Male sterility protein AhyD4_RS09690 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS09690 PF00501 AMP-binding enzyme AhyD4_RS09690 PF00668 Condensation domain AhyD4_RS09690 PF00550 Phosphopantetheine attachment site AhyD4_RS09695 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS09695 PF00975 Thioesterase domain AhyD4_RS09695 PF00668 Condensation domain AhyD4_RS09695 PF00501 AMP-binding enzyme AhyD4_RS09695 PF00550 Phosphopantetheine attachment site AhyD4_RS09700 PF01497 Periplasmic binding protein AhyD4_RS09705 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AhyD4_RS09705 PF01648 4'-phosphopantetheinyl transferase superfamily AhyD4_RS09710 PF00005 ABC transporter AhyD4_RS09715 PF01032 FecCD transport family AhyD4_RS09720 PF01032 FecCD transport family AhyD4_RS09725 PF00593 TonB dependent receptor AhyD4_RS09725 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS09740 PF11143 Protein of unknown function (DUF2919) AhyD4_RS09745 PF01544 CorA-like Mg2+ transporter protein AhyD4_RS09755 PF01012 Electron transfer flavoprotein domain AhyD4_RS09760 PF00766 Electron transfer flavoprotein FAD-binding domain AhyD4_RS09760 PF01012 Electron transfer flavoprotein domain AhyD4_RS09765 PF00266 Aminotransferase class-V AhyD4_RS09770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AhyD4_RS09775 PF00793 DAHP synthetase I family AhyD4_RS09780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS09780 PF00672 HAMP domain AhyD4_RS09785 PF04055 Radical SAM superfamily AhyD4_RS09790 PF02601 Exonuclease VII, large subunit AhyD4_RS09790 PF13742 OB-fold nucleic acid binding domain AhyD4_RS09795 PF00892 EamA-like transporter family AhyD4_RS09800 PF02472 Biopolymer transport protein ExbD/TolR AhyD4_RS09805 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS09815 PF02705 K+ potassium transporter AhyD4_RS09820 PF00571 CBS domain AhyD4_RS09820 PF00478 IMP dehydrogenase / GMP reductase domain AhyD4_RS09825 PF02540 NAD synthase AhyD4_RS09825 PF00117 Glutamine amidotransferase class-I AhyD4_RS09825 PF00958 GMP synthase C terminal domain AhyD4_RS09830 PF00589 Phage integrase family AhyD4_RS09830 PF13356 Arm DNA-binding domain AhyD4_RS09880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AhyD4_RS09880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhyD4_RS09880 PF02805 Metal binding domain of Ada AhyD4_RS09880 PF12833 Helix-turn-helix domain AhyD4_RS09895 PF05724 Thiopurine S-methyltransferase (TPMT) AhyD4_RS09900 PF00675 Insulinase (Peptidase family M16) AhyD4_RS09900 PF05193 Peptidase M16 inactive domain AhyD4_RS09905 PF00300 Histidine phosphatase superfamily (branch 1) AhyD4_RS09915 PF00892 EamA-like transporter family AhyD4_RS09920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS09925 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AhyD4_RS09930 PF02559 CarD-like/TRCF domain AhyD4_RS09930 PF17757 UvrB interaction domain AhyD4_RS09930 PF03461 TRCF domain AhyD4_RS09930 PF00271 Helicase conserved C-terminal domain AhyD4_RS09930 PF00270 DEAD/DEAH box helicase AhyD4_RS09940 PF02687 FtsX-like permease family AhyD4_RS09940 PF12704 MacB-like periplasmic core domain AhyD4_RS09945 PF00005 ABC transporter AhyD4_RS09950 PF12704 MacB-like periplasmic core domain AhyD4_RS09950 PF02687 FtsX-like permease family AhyD4_RS09965 PF05698 Bacterial trigger factor protein (TF) C-terminus AhyD4_RS09965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS09965 PF05697 Bacterial trigger factor protein (TF) AhyD4_RS09970 PF00574 Clp protease AhyD4_RS09975 PF06689 ClpX C4-type zinc finger AhyD4_RS09975 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS09975 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS09980 PF02190 ATP-dependent protease La (LON) substrate-binding domain AhyD4_RS09980 PF05362 Lon protease (S16) C-terminal proteolytic domain AhyD4_RS09980 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS09990 PF13145 PPIC-type PPIASE domain AhyD4_RS09995 PF00005 ABC transporter AhyD4_RS09995 PF12848 ABC transporter AhyD4_RS10000 PF00474 Sodium:solute symporter family AhyD4_RS10005 PF04341 Protein of unknown function, DUF485 AhyD4_RS10020 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS10055 PF01235 Sodium:alanine symporter family AhyD4_RS10065 PF06167 Glucose-regulated metallo-peptidase M90 AhyD4_RS10070 PF01184 GPR1/FUN34/yaaH family AhyD4_RS10085 PF09278 MerR, DNA binding AhyD4_RS10085 PF00376 MerR family regulatory protein AhyD4_RS10090 PF00682 HMGL-like AhyD4_RS10095 PF00289 Biotin carboxylase, N-terminal domain AhyD4_RS10095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhyD4_RS10095 PF02785 Biotin carboxylase C-terminal domain AhyD4_RS10095 PF00364 Biotin-requiring enzyme AhyD4_RS10100 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS10105 PF01039 Carboxyl transferase domain AhyD4_RS10110 PF02770 Acyl-CoA dehydrogenase, middle domain AhyD4_RS10110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhyD4_RS10110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhyD4_RS10115 PF00171 Aldehyde dehydrogenase family AhyD4_RS10120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhyD4_RS10120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhyD4_RS10120 PF02770 Acyl-CoA dehydrogenase, middle domain AhyD4_RS10125 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS10130 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS10135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AhyD4_RS10135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AhyD4_RS10145 PF13520 Amino acid permease AhyD4_RS10150 PF01925 Sulfite exporter TauE/SafE AhyD4_RS10185 PF04002 RadC-like JAB domain AhyD4_RS10195 PF00239 Resolvase, N terminal domain AhyD4_RS10195 PF02796 Helix-turn-helix domain of resolvase AhyD4_RS10210 PF03466 LysR substrate binding domain AhyD4_RS10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS10215 PF12146 Serine aminopeptidase, S33 AhyD4_RS10220 PF07676 WD40-like Beta Propeller Repeat AhyD4_RS10220 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AhyD4_RS10220 PF00326 Prolyl oligopeptidase family AhyD4_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS10230 PF03466 LysR substrate binding domain AhyD4_RS10235 PF00248 Aldo/keto reductase family AhyD4_RS10245 PF00248 Aldo/keto reductase family AhyD4_RS10250 PF07694 5TMR of 5TMR-LYT AhyD4_RS10250 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS10255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS10255 PF03466 LysR substrate binding domain AhyD4_RS10260 PF00232 Glycosyl hydrolase family 1 AhyD4_RS10265 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS10265 PF00563 EAL domain AhyD4_RS10265 PF13188 PAS domain AhyD4_RS10265 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS10275 PF01966 HD domain AhyD4_RS10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS10285 PF03466 LysR substrate binding domain AhyD4_RS10290 PF01261 Xylose isomerase-like TIM barrel AhyD4_RS10295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AhyD4_RS10295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhyD4_RS10300 PF03466 LysR substrate binding domain AhyD4_RS10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS10310 PF03279 Bacterial lipid A biosynthesis acyltransferase AhyD4_RS10315 PF03279 Bacterial lipid A biosynthesis acyltransferase AhyD4_RS10330 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS10330 PF17151 Periplasmic sensor domain AhyD4_RS10340 PF03104 DNA polymerase family B, exonuclease domain AhyD4_RS10340 PF00136 DNA polymerase family B AhyD4_RS10370 PF01554 MatE AhyD4_RS10375 PF06786 Uncharacterised protein family (UPF0253) AhyD4_RS10380 PF00677 Lumazine binding domain AhyD4_RS10390 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS10395 PF02222 ATP-grasp domain AhyD4_RS10395 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS10400 PF00892 EamA-like transporter family AhyD4_RS10405 PF02525 Flavodoxin-like fold AhyD4_RS10430 PF13509 S1 domain AhyD4_RS10430 PF17783 CvfB-like winged helix domain AhyD4_RS10440 PF04269 Protein of unknown function, DUF440 AhyD4_RS10445 PF00912 Transglycosylase AhyD4_RS10450 PF04269 Protein of unknown function, DUF440 AhyD4_RS10455 PF03776 Septum formation topological specificity factor MinE AhyD4_RS10460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AhyD4_RS10465 PF05209 Septum formation inhibitor MinC, N-terminal domain AhyD4_RS10465 PF03775 Septum formation inhibitor MinC, C-terminal domain AhyD4_RS10470 PF05166 YcgL domain AhyD4_RS10475 PF13406 Transglycosylase SLT domain AhyD4_RS10480 PF03315 Serine dehydratase beta chain AhyD4_RS10480 PF03313 Serine dehydratase alpha chain AhyD4_RS10485 PF03313 Serine dehydratase alpha chain AhyD4_RS10485 PF03315 Serine dehydratase beta chain AhyD4_RS10490 PF06865 Pyrimidine/purine nucleoside phosphorylase AhyD4_RS10495 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS10500 PF09278 MerR, DNA binding AhyD4_RS10500 PF00376 MerR family regulatory protein AhyD4_RS10505 PF00108 Thiolase, N-terminal domain AhyD4_RS10505 PF02803 Thiolase, C-terminal domain AhyD4_RS10510 PF08668 HDOD domain AhyD4_RS10510 PF00563 EAL domain AhyD4_RS10520 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AhyD4_RS10530 PF08281 Sigma-70, region 4 AhyD4_RS10530 PF04542 Sigma-70 region 2 AhyD4_RS10555 PF01882 Protein of unknown function DUF58 AhyD4_RS10560 PF17863 AAA lid domain AhyD4_RS10560 PF07726 ATPase family associated with various cellular activities (AAA) AhyD4_RS10565 PF00108 Thiolase, N-terminal domain AhyD4_RS10565 PF02803 Thiolase, C-terminal domain AhyD4_RS10570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AhyD4_RS10570 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS10570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AhyD4_RS10575 PF07152 YaeQ protein AhyD4_RS10595 PF10123 Mu-like prophage I protein AhyD4_RS10600 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS10600 PF00158 Sigma-54 interaction domain AhyD4_RS10600 PF13188 PAS domain AhyD4_RS10605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhyD4_RS10605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhyD4_RS10610 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS10615 PF01546 Peptidase family M20/M25/M40 AhyD4_RS10615 PF07687 Peptidase dimerisation domain AhyD4_RS10620 PF01979 Amidohydrolase family AhyD4_RS10625 PF00696 Amino acid kinase family AhyD4_RS10630 PF00892 EamA-like transporter family AhyD4_RS10635 PF13478 XdhC Rossmann domain AhyD4_RS10635 PF02625 XdhC and CoxI family AhyD4_RS10645 PF12804 MobA-like NTP transferase domain AhyD4_RS10650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AhyD4_RS10650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS10655 PF01979 Amidohydrolase family AhyD4_RS10660 PF00941 FAD binding domain in molybdopterin dehydrogenase AhyD4_RS10665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AhyD4_RS10665 PF01799 [2Fe-2S] binding domain AhyD4_RS10665 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AhyD4_RS10670 PF00860 Permease family AhyD4_RS10675 PF01979 Amidohydrolase family AhyD4_RS10680 PF00860 Permease family AhyD4_RS10685 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AhyD4_RS10685 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AhyD4_RS10690 PF03450 CO dehydrogenase flavoprotein C-terminal domain AhyD4_RS10690 PF00941 FAD binding domain in molybdopterin dehydrogenase AhyD4_RS10695 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS10695 PF01799 [2Fe-2S] binding domain AhyD4_RS10705 PF05433 Glycine zipper 2TM domain AhyD4_RS10715 PF03606 C4-dicarboxylate anaerobic carrier AhyD4_RS10720 PF00501 AMP-binding enzyme AhyD4_RS10720 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS10725 PF01502 Phosphoribosyl-AMP cyclohydrolase AhyD4_RS10725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AhyD4_RS10730 PF00977 Histidine biosynthesis protein AhyD4_RS10735 PF00072 Response regulator receiver domain AhyD4_RS10735 PF01627 Hpt domain AhyD4_RS10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS10735 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS10740 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS10740 PF08448 PAS fold AhyD4_RS10745 PF00072 Response regulator receiver domain AhyD4_RS10750 PF00977 Histidine biosynthesis protein AhyD4_RS10755 PF00117 Glutamine amidotransferase class-I AhyD4_RS10760 PF08645 Polynucleotide kinase 3 phosphatase AhyD4_RS10760 PF00475 Imidazoleglycerol-phosphate dehydratase AhyD4_RS10765 PF00155 Aminotransferase class I and II AhyD4_RS10770 PF00815 Histidinol dehydrogenase AhyD4_RS10775 PF01634 ATP phosphoribosyltransferase AhyD4_RS10775 PF08029 HisG, C-terminal domain AhyD4_RS10785 PF04851 Type III restriction enzyme, res subunit AhyD4_RS10785 PF13307 Helicase C-terminal domain AhyD4_RS10790 PF00814 Glycoprotease family AhyD4_RS10800 PF12697 Alpha/beta hydrolase family AhyD4_RS10800 PF08241 Methyltransferase domain AhyD4_RS10805 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS10805 PF00501 AMP-binding enzyme AhyD4_RS10810 PF01612 3'-5' exonuclease AhyD4_RS10810 PF00570 HRDC domain AhyD4_RS10815 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS10920 PF02796 Helix-turn-helix domain of resolvase AhyD4_RS10920 PF00239 Resolvase, N terminal domain AhyD4_RS10930 PF00239 Resolvase, N terminal domain AhyD4_RS10930 PF07508 Recombinase AhyD4_RS10930 PF13408 Recombinase zinc beta ribbon domain AhyD4_RS10940 PF01207 Dihydrouridine synthase (Dus) AhyD4_RS10945 PF04304 Protein of unknown function (DUF454) AhyD4_RS10950 PF00156 Phosphoribosyl transferase domain AhyD4_RS10955 PF12169 DNA polymerase III subunits gamma and tau domain III AhyD4_RS10955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AhyD4_RS10955 PF12170 DNA polymerase III tau subunit V interacting with alpha AhyD4_RS10960 PF02575 YbaB/EbfC DNA-binding family AhyD4_RS10965 PF00589 Phage integrase family AhyD4_RS10965 PF12167 Arm DNA-binding domain AhyD4_RS10995 PF06630 Enterobacterial exodeoxyribonuclease VIII AhyD4_RS10995 PF12684 PDDEXK-like domain of unknown function (DUF3799) AhyD4_RS11090 PF00199 Catalase AhyD4_RS11090 PF06628 Catalase-related immune-responsive AhyD4_RS11100 PF00080 Copper/zinc superoxide dismutase (SODC) AhyD4_RS11115 PF03374 Phage antirepressor protein KilAC domain AhyD4_RS11115 PF09669 Phage regulatory protein Rha (Phage_pRha) AhyD4_RS11120 PF05772 NinB protein AhyD4_RS11135 PF01338 Bacillus thuringiensis toxin AhyD4_RS11140 PF11798 IMS family HHH motif AhyD4_RS11140 PF11799 impB/mucB/samB family C-terminal domain AhyD4_RS11140 PF13438 Domain of unknown function (DUF4113) AhyD4_RS11140 PF00817 impB/mucB/samB family AhyD4_RS11145 PF00717 Peptidase S24-like AhyD4_RS11160 PF00816 H-NS histone family AhyD4_RS11310 PF00072 Response regulator receiver domain AhyD4_RS11310 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS11315 PF01743 Poly A polymerase head domain AhyD4_RS11315 PF00571 CBS domain AhyD4_RS11315 PF01368 DHH family AhyD4_RS11315 PF02272 DHHA1 domain AhyD4_RS11320 PF04408 Helicase associated domain (HA2) AhyD4_RS11320 PF00271 Helicase conserved C-terminal domain AhyD4_RS11320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AhyD4_RS11320 PF00270 DEAD/DEAH box helicase AhyD4_RS11320 PF11898 Domain of unknown function (DUF3418) AhyD4_RS11330 PF01386 Ribosomal L25p family AhyD4_RS11335 PF00072 Response regulator receiver domain AhyD4_RS11335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhyD4_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS11335 PF00672 HAMP domain AhyD4_RS11335 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS11335 PF01627 Hpt domain AhyD4_RS11340 PF00072 Response regulator receiver domain AhyD4_RS11345 PF00753 Metallo-beta-lactamase superfamily AhyD4_RS11355 PF02769 AIR synthase related protein, C-terminal domain AhyD4_RS11355 PF00586 AIR synthase related protein, N-terminal domain AhyD4_RS11375 PF10672 S-adenosylmethionine-dependent methyltransferase AhyD4_RS11375 PF17785 PUA-like domain AhyD4_RS11380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS11380 PF00672 HAMP domain AhyD4_RS11380 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS11385 PF00708 Acylphosphatase AhyD4_RS11390 PF00043 Glutathione S-transferase, C-terminal domain AhyD4_RS11390 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS11395 PF01588 Putative tRNA binding domain AhyD4_RS11395 PF08264 Anticodon-binding domain of tRNA AhyD4_RS11395 PF09334 tRNA synthetases class I (M) AhyD4_RS11400 PF10609 NUBPL iron-transfer P-loop NTPase AhyD4_RS11405 PF00485 Phosphoribulokinase / Uridine kinase family AhyD4_RS11410 PF00692 dUTPase AhyD4_RS11415 PF01384 Phosphate transporter family AhyD4_RS11420 PF10150 Ribonuclease E/G family AhyD4_RS11420 PF00575 S1 RNA binding domain AhyD4_RS11420 PF12111 Polyribonucleotide phosphorylase C terminal AhyD4_RS11425 PF00849 RNA pseudouridylate synthase AhyD4_RS11425 PF01479 S4 domain AhyD4_RS11435 PF02545 Maf-like protein AhyD4_RS11440 PF07690 Major Facilitator Superfamily AhyD4_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS11445 PF03466 LysR substrate binding domain AhyD4_RS11455 PF02620 Large ribosomal RNA subunit accumulation protein YceD AhyD4_RS11460 PF01783 Ribosomal L32p protein family AhyD4_RS11465 PF02504 Fatty acid synthesis protein AhyD4_RS11470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AhyD4_RS11470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AhyD4_RS11475 PF00698 Acyl transferase domain AhyD4_RS11485 PF00550 Phosphopantetheine attachment site AhyD4_RS11490 PF00109 Beta-ketoacyl synthase, N-terminal domain AhyD4_RS11490 PF02801 Beta-ketoacyl synthase, C-terminal domain AhyD4_RS11495 PF01063 Amino-transferase class IV AhyD4_RS11500 PF02618 YceG-like family AhyD4_RS11505 PF02223 Thymidylate kinase AhyD4_RS11510 PF09115 DNA polymerase III, delta subunit, C terminal AhyD4_RS11515 PF01026 TatD related DNase AhyD4_RS11520 PF00589 Phage integrase family AhyD4_RS11530 PF01189 16S rRNA methyltransferase RsmB/F AhyD4_RS11530 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AhyD4_RS11530 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AhyD4_RS11535 PF02470 MlaD protein AhyD4_RS11540 PF04403 Paraquat-inducible protein A AhyD4_RS11555 PF00285 Citrate synthase, C-terminal domain AhyD4_RS11560 PF03972 MmgE/PrpD family AhyD4_RS11575 PF06974 Protein of unknown function (DUF1298) AhyD4_RS11575 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AhyD4_RS11600 PF00106 short chain dehydrogenase AhyD4_RS11610 PF07130 YebG protein AhyD4_RS11620 PF05362 Lon protease (S16) C-terminal proteolytic domain AhyD4_RS11620 PF13654 AAA domain AhyD4_RS11625 PF07977 FabA-like domain AhyD4_RS11635 PF12848 ABC transporter AhyD4_RS11635 PF16326 ABC transporter C-terminal domain AhyD4_RS11635 PF00005 ABC transporter AhyD4_RS11645 PF10672 S-adenosylmethionine-dependent methyltransferase AhyD4_RS11645 PF01170 Putative RNA methylase family UPF0020 AhyD4_RS11645 PF02926 THUMP domain AhyD4_RS11650 PF07126 Cell-division protein ZapC AhyD4_RS11655 PF01180 Dihydroorotate dehydrogenase AhyD4_RS11660 PF05088 Bacterial NAD-glutamate dehydrogenase AhyD4_RS11670 PF11940 Domain of unknown function (DUF3458) Ig-like fold AhyD4_RS11670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AhyD4_RS11670 PF01433 Peptidase family M1 domain AhyD4_RS11675 PF00595 PDZ domain AhyD4_RS11675 PF17804 Tail specific protease N-terminal domain AhyD4_RS11675 PF11818 C-terminal domain of tail specific protease (DUF3340) AhyD4_RS11675 PF03572 Peptidase family S41 AhyD4_RS11680 PF04352 ProQ/FINO family AhyD4_RS11680 PF17516 ProQ C-terminal domain AhyD4_RS11685 PF13185 GAF domain AhyD4_RS11695 PF00115 Cytochrome C and Quinol oxidase polypeptide I AhyD4_RS11710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AhyD4_RS11710 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AhyD4_RS11720 PF00403 Heavy-metal-associated domain AhyD4_RS11735 PF00027 Cyclic nucleotide-binding domain AhyD4_RS11735 PF13545 Crp-like helix-turn-helix domain AhyD4_RS11740 PF00582 Universal stress protein family AhyD4_RS11745 PF01171 PP-loop family AhyD4_RS11760 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS11760 PF14497 Glutathione S-transferase, C-terminal domain AhyD4_RS11765 PF05025 RbsD / FucU transport protein family AhyD4_RS11770 PF00005 ABC transporter AhyD4_RS11775 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS11780 PF13407 Periplasmic binding protein domain AhyD4_RS11785 PF00294 pfkB family carbohydrate kinase AhyD4_RS11790 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS11795 PF17152 Periplasmic sensor domain AhyD4_RS11795 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS11805 PF02146 Sir2 family AhyD4_RS11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS11820 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS11820 PF00072 Response regulator receiver domain AhyD4_RS11820 PF09456 RcsC Alpha-Beta-Loop (ABL) AhyD4_RS11825 PF00216 Bacterial DNA-binding protein AhyD4_RS11830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AhyD4_RS11830 PF03484 tRNA synthetase B5 domain AhyD4_RS11830 PF01588 Putative tRNA binding domain AhyD4_RS11830 PF03147 Ferredoxin-fold anticodon binding domain AhyD4_RS11830 PF03483 B3/4 domain AhyD4_RS11835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AhyD4_RS11835 PF01409 tRNA synthetases class II core domain (F) AhyD4_RS11840 PF00453 Ribosomal protein L20 AhyD4_RS11845 PF01632 Ribosomal protein L35 AhyD4_RS11850 PF00707 Translation initiation factor IF-3, C-terminal domain AhyD4_RS11850 PF05198 Translation initiation factor IF-3, N-terminal domain AhyD4_RS11855 PF02824 TGS domain AhyD4_RS11855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AhyD4_RS11855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhyD4_RS11855 PF03129 Anticodon binding domain AhyD4_RS11865 PF04055 Radical SAM superfamily AhyD4_RS11870 PF00521 DNA gyrase/topoisomerase IV, subunit A AhyD4_RS11870 PF03989 DNA gyrase C-terminal domain, beta-propeller AhyD4_RS11880 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS11885 PF03477 ATP cone domain AhyD4_RS11885 PF02867 Ribonucleotide reductase, barrel domain AhyD4_RS11885 PF00317 Ribonucleotide reductase, all-alpha domain AhyD4_RS11890 PF00268 Ribonucleotide reductase, small chain AhyD4_RS11895 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS11900 PF06725 3D domain AhyD4_RS11900 PF03562 MltA specific insert domain AhyD4_RS11905 PF06945 Protein of unknown function (DUF1289) AhyD4_RS11915 PF03613 PTS system mannose/fructose/sorbose family IID component AhyD4_RS11920 PF03609 PTS system sorbose-specific iic component AhyD4_RS11925 PF03830 PTS system sorbose subfamily IIB component AhyD4_RS11925 PF03610 PTS system fructose IIA component AhyD4_RS11940 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS11940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS11945 PF06560 Glucose-6-phosphate isomerase (GPI) AhyD4_RS11950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AhyD4_RS11950 PF02378 Phosphotransferase system, EIIC AhyD4_RS11955 PF00294 pfkB family carbohydrate kinase AhyD4_RS11960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS11960 PF00381 PTS HPr component phosphorylation site AhyD4_RS11965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS11965 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS11970 PF03222 Tryptophan/tyrosine permease family AhyD4_RS11990 PF00270 DEAD/DEAH box helicase AhyD4_RS11990 PF00271 Helicase conserved C-terminal domain AhyD4_RS12000 PF01264 Chorismate synthase AhyD4_RS12005 PF05175 Methyltransferase small domain AhyD4_RS12010 PF01713 Smr domain AhyD4_RS12020 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS12020 PF08448 PAS fold AhyD4_RS12025 PF00300 Histidine phosphatase superfamily (branch 1) AhyD4_RS12040 PF08329 Chitinase A, N-terminal domain AhyD4_RS12040 PF00704 Glycosyl hydrolases family 18 AhyD4_RS12050 PF08274 PhnA Zinc-Ribbon AhyD4_RS12050 PF03831 PhnA domain AhyD4_RS12065 PF02567 Phenazine biosynthesis-like protein AhyD4_RS12080 PF01327 Polypeptide deformylase AhyD4_RS12095 PF05036 Sporulation related domain AhyD4_RS12095 PF03330 Lytic transglycolase AhyD4_RS12100 PF04310 MukB N-terminal AhyD4_RS12100 PF16330 MukB hinge domain AhyD4_RS12105 PF04288 MukE-like family AhyD4_RS12110 PF03882 MukF winged-helix domain AhyD4_RS12110 PF17193 MukF C-terminal domain AhyD4_RS12110 PF17192 MukF middle domain AhyD4_RS12115 PF13847 Methyltransferase domain AhyD4_RS12120 PF02698 DUF218 domain AhyD4_RS12125 PF00121 Triosephosphate isomerase AhyD4_RS12130 PF00365 Phosphofructokinase AhyD4_RS12135 PF01546 Peptidase family M20/M25/M40 AhyD4_RS12135 PF07687 Peptidase dimerisation domain AhyD4_RS12140 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS12145 PF02789 Cytosol aminopeptidase family, N-terminal domain AhyD4_RS12145 PF00883 Cytosol aminopeptidase family, catalytic domain AhyD4_RS12185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AhyD4_RS12185 PF00128 Alpha amylase, catalytic domain AhyD4_RS12195 PF11398 Protein of unknown function (DUF2813) AhyD4_RS12200 PF12833 Helix-turn-helix domain AhyD4_RS12200 PF14525 AraC-binding-like domain AhyD4_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS12210 PF03466 LysR substrate binding domain AhyD4_RS12215 PF01925 Sulfite exporter TauE/SafE AhyD4_RS12220 PF03942 DTW domain AhyD4_RS12225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS12225 PF18029 Glyoxalase-like domain AhyD4_RS12230 PF01820 D-ala D-ala ligase N-terminus AhyD4_RS12230 PF07478 D-ala D-ala ligase C-terminus AhyD4_RS12240 PF00255 Glutathione peroxidase AhyD4_RS12245 PF00270 DEAD/DEAH box helicase AhyD4_RS12245 PF00271 Helicase conserved C-terminal domain AhyD4_RS12250 PF13673 Acetyltransferase (GNAT) domain AhyD4_RS12260 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AhyD4_RS12270 PF01928 CYTH domain AhyD4_RS12280 PF00583 Acetyltransferase (GNAT) family AhyD4_RS12285 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS12290 PF03992 Antibiotic biosynthesis monooxygenase AhyD4_RS12295 PF08543 Phosphomethylpyrimidine kinase AhyD4_RS12315 PF00561 alpha/beta hydrolase fold AhyD4_RS12315 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AhyD4_RS12320 PF01575 MaoC like domain AhyD4_RS12335 PF00664 ABC transporter transmembrane region AhyD4_RS12335 PF00005 ABC transporter AhyD4_RS12340 PF00005 ABC transporter AhyD4_RS12340 PF00664 ABC transporter transmembrane region AhyD4_RS12345 PF00072 Response regulator receiver domain AhyD4_RS12345 PF01627 Hpt domain AhyD4_RS12345 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS12345 PF00672 HAMP domain AhyD4_RS12345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhyD4_RS12350 PF00085 Thioredoxin AhyD4_RS12360 PF00343 Carbohydrate phosphorylase AhyD4_RS12385 PF04715 Anthranilate synthase component I, N terminal region AhyD4_RS12385 PF00425 chorismate binding enzyme AhyD4_RS12390 PF00293 NUDIX domain AhyD4_RS12395 PF03222 Tryptophan/tyrosine permease family AhyD4_RS12400 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS12405 PF09382 RQC domain AhyD4_RS12405 PF16124 RecQ zinc-binding AhyD4_RS12405 PF00570 HRDC domain AhyD4_RS12405 PF00270 DEAD/DEAH box helicase AhyD4_RS12405 PF00271 Helicase conserved C-terminal domain AhyD4_RS12410 PF06798 PrkA serine protein kinase C-terminal domain AhyD4_RS12410 PF08298 PrkA AAA domain AhyD4_RS12415 PF04285 Protein of unknown function (DUF444) AhyD4_RS12420 PF04293 SpoVR like protein AhyD4_RS12425 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS12425 PF07840 FadR C-terminal domain AhyD4_RS12430 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AhyD4_RS12435 PF02600 Disulfide bond formation protein DsbB AhyD4_RS12440 PF09335 SNARE associated Golgi protein AhyD4_RS12450 PF00271 Helicase conserved C-terminal domain AhyD4_RS12450 PF17757 UvrB interaction domain AhyD4_RS12450 PF12344 Ultra-violet resistance protein B AhyD4_RS12450 PF04851 Type III restriction enzyme, res subunit AhyD4_RS12450 PF02151 UvrB/uvrC motif AhyD4_RS12460 PF02080 TrkA-C domain AhyD4_RS12460 PF06826 Predicted Permease Membrane Region AhyD4_RS12465 PF01464 Transglycosylase SLT domain AhyD4_RS12465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS12480 PF01970 Tripartite tricarboxylate transporter TctA family AhyD4_RS12485 PF08279 HTH domain AhyD4_RS12485 PF00072 Response regulator receiver domain AhyD4_RS12485 PF12431 Transcriptional regulator AhyD4_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS12490 PF00989 PAS fold AhyD4_RS12490 PF17203 Single cache domain 3 AhyD4_RS12490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AhyD4_RS12495 PF01047 MarR family AhyD4_RS12495 PF00480 ROK family AhyD4_RS12500 PF17200 Single Cache domain 2 AhyD4_RS12500 PF00672 HAMP domain AhyD4_RS12500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS12505 PF02810 SEC-C motif AhyD4_RS12510 PF04324 BFD-like [2Fe-2S] binding domain AhyD4_RS12510 PF01266 FAD dependent oxidoreductase AhyD4_RS12515 PF00890 FAD binding domain AhyD4_RS12520 PF13183 4Fe-4S dicluster domain AhyD4_RS12520 PF02754 Cysteine-rich domain AhyD4_RS12535 PF02335 Cytochrome c552 AhyD4_RS12540 PF13435 Cytochrome c554 and c-prime AhyD4_RS12540 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AhyD4_RS12545 PF13247 4Fe-4S dicluster domain AhyD4_RS12545 PF00037 4Fe-4S binding domain AhyD4_RS12550 PF03916 Polysulphide reductase, NrfD AhyD4_RS12555 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AhyD4_RS12555 PF01578 Cytochrome C assembly protein AhyD4_RS12560 PF08534 Redoxin AhyD4_RS12565 PF03918 Cytochrome C biogenesis protein AhyD4_RS12570 PF00293 NUDIX domain AhyD4_RS12575 PF00768 D-alanyl-D-alanine carboxypeptidase AhyD4_RS12580 PF01212 Beta-eliminating lyase AhyD4_RS12585 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AhyD4_RS12590 PF01266 FAD dependent oxidoreductase AhyD4_RS12600 PF07969 Amidohydrolase family AhyD4_RS12605 PF00478 IMP dehydrogenase / GMP reductase domain AhyD4_RS12605 PF00571 CBS domain AhyD4_RS12615 PF01717 Cobalamin-independent synthase, Catalytic domain AhyD4_RS12615 PF08267 Cobalamin-independent synthase, N-terminal domain AhyD4_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS12620 PF03466 LysR substrate binding domain AhyD4_RS12630 PF00593 TonB dependent receptor AhyD4_RS12630 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS12635 PF12833 Helix-turn-helix domain AhyD4_RS12640 PF00106 short chain dehydrogenase AhyD4_RS12645 PF03466 LysR substrate binding domain AhyD4_RS12645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS12650 PF13460 NAD(P)H-binding AhyD4_RS12660 PF01053 Cys/Met metabolism PLP-dependent enzyme AhyD4_RS12665 PF05193 Peptidase M16 inactive domain AhyD4_RS12665 PF00675 Insulinase (Peptidase family M16) AhyD4_RS12670 PF01118 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS12670 PF02774 Semialdehyde dehydrogenase, dimerisation domain AhyD4_RS12675 PF00893 Small Multidrug Resistance protein AhyD4_RS12680 PF18381 YcaO cyclodehydratase C-terminal domain AhyD4_RS12680 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AhyD4_RS12685 PF01226 Formate/nitrite transporter AhyD4_RS12690 PF01228 Glycine radical AhyD4_RS12690 PF02901 Pyruvate formate lyase-like AhyD4_RS12700 PF00202 Aminotransferase class-III AhyD4_RS12705 PF00266 Aminotransferase class-V AhyD4_RS12710 PF07702 UTRA domain AhyD4_RS12710 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS12720 PF00005 ABC transporter AhyD4_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS12730 PF01266 FAD dependent oxidoreductase AhyD4_RS12735 PF03692 Putative zinc- or iron-chelating domain AhyD4_RS12745 PF00549 CoA-ligase AhyD4_RS12745 PF02629 CoA binding domain AhyD4_RS12750 PF00549 CoA-ligase AhyD4_RS12750 PF08442 ATP-grasp domain AhyD4_RS12755 PF02817 e3 binding domain AhyD4_RS12755 PF00364 Biotin-requiring enzyme AhyD4_RS12755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AhyD4_RS12760 PF02779 Transketolase, pyrimidine binding domain AhyD4_RS12760 PF16078 2-oxoglutarate dehydrogenase N-terminus AhyD4_RS12760 PF16870 2-oxoglutarate dehydrogenase C-terminal AhyD4_RS12760 PF00676 Dehydrogenase E1 component AhyD4_RS12765 PF13085 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS12770 PF00890 FAD binding domain AhyD4_RS12770 PF02910 Fumarate reductase flavoprotein C-term AhyD4_RS12775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AhyD4_RS12780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AhyD4_RS12785 PF00285 Citrate synthase, C-terminal domain AhyD4_RS12800 PF00109 Beta-ketoacyl synthase, N-terminal domain AhyD4_RS12800 PF02801 Beta-ketoacyl synthase, C-terminal domain AhyD4_RS12805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AhyD4_RS12805 PF01266 FAD dependent oxidoreductase AhyD4_RS12815 PF03606 C4-dicarboxylate anaerobic carrier AhyD4_RS12830 PF01863 Protein of unknown function DUF45 AhyD4_RS12845 PF01197 Ribosomal protein L31 AhyD4_RS12850 PF00444 Ribosomal protein L36 AhyD4_RS12855 PF02678 Pirin AhyD4_RS12855 PF05726 Pirin C-terminal cupin domain AhyD4_RS12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS12860 PF03466 LysR substrate binding domain AhyD4_RS12865 PF02311 AraC-like ligand binding domain AhyD4_RS12865 PF12833 Helix-turn-helix domain AhyD4_RS12870 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS12875 PF00005 ABC transporter AhyD4_RS12880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS12885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AhyD4_RS12890 PF00596 Class II Aldolase and Adducin N-terminal domain AhyD4_RS12895 PF11762 L-arabinose isomerase C-terminal domain AhyD4_RS12895 PF02610 L-arabinose isomerase AhyD4_RS12900 PF00929 Exonuclease AhyD4_RS12900 PF08411 Exonuclease C-terminal AhyD4_RS12915 PF03788 LrgA family AhyD4_RS12920 PF04172 LrgB-like family AhyD4_RS12925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AhyD4_RS12925 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AhyD4_RS12930 PF00501 AMP-binding enzyme AhyD4_RS12935 PF08891 YfcL protein AhyD4_RS12945 PF03741 Integral membrane protein TerC family AhyD4_RS12950 PF00691 OmpA family AhyD4_RS12955 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS12955 PF17152 Periplasmic sensor domain AhyD4_RS12960 PF13689 YfiR/HmsC-like AhyD4_RS12965 PF00158 Sigma-54 interaction domain AhyD4_RS12965 PF18024 Helix-turn-helix domain AhyD4_RS12970 PF01329 Pterin 4 alpha carbinolamine dehydratase AhyD4_RS12975 PF01329 Pterin 4 alpha carbinolamine dehydratase AhyD4_RS12980 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AhyD4_RS12985 PF05128 Domain of unknown function (DUF697) AhyD4_RS12990 PF04317 YcjX-like family, DUF463 AhyD4_RS13000 PF06667 Phage shock protein B AhyD4_RS13005 PF04012 PspA/IM30 family AhyD4_RS13010 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS13010 PF00158 Sigma-54 interaction domain AhyD4_RS13015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS13025 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS13030 PF00005 ABC transporter AhyD4_RS13030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS13035 PF00005 ABC transporter AhyD4_RS13040 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AhyD4_RS13045 PF00156 Phosphoribosyl transferase domain AhyD4_RS13050 PF02674 Colicin V production protein AhyD4_RS13055 PF02403 Seryl-tRNA synthetase N-terminal domain AhyD4_RS13055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhyD4_RS13065 PF12002 MgsA AAA+ ATPase C terminal AhyD4_RS13065 PF16193 AAA C-terminal domain AhyD4_RS13065 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS13070 PF03548 Outer membrane lipoprotein carrier protein LolA AhyD4_RS13075 PF01580 FtsK/SpoIIIE family AhyD4_RS13075 PF17854 FtsK alpha domain AhyD4_RS13075 PF09397 Ftsk gamma domain AhyD4_RS13075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AhyD4_RS13080 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS13085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS13090 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS13090 PF17158 Membrane-associated sensor, integral membrane domain AhyD4_RS13095 PF05433 Glycine zipper 2TM domain AhyD4_RS13100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AhyD4_RS13105 PF04377 Arginine-tRNA-protein transferase, C terminus AhyD4_RS13105 PF04376 Arginine-tRNA-protein transferase, N terminus AhyD4_RS13110 PF01176 Translation initiation factor 1A / IF-1 AhyD4_RS13115 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS13115 PF02861 Clp amino terminal domain, pathogenicity island component AhyD4_RS13115 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS13115 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS13115 PF17871 AAA lid domain AhyD4_RS13120 PF02617 ATP-dependent Clp protease adaptor protein ClpS AhyD4_RS13125 PF00313 'Cold-shock' DNA-binding domain AhyD4_RS13130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AhyD4_RS13130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AhyD4_RS13160 PF00182 Chitinase class I AhyD4_RS13170 PF04717 Type VI secretion system, phage-baseplate injector AhyD4_RS13185 PF06744 Type VI secretion protein IcmF C-terminal AhyD4_RS13185 PF06761 Intracellular multiplication and human macrophage-killing AhyD4_RS13185 PF14331 ImcF-related N-terminal domain AhyD4_RS13200 PF00158 Sigma-54 interaction domain AhyD4_RS13200 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS13205 PF07724 AAA domain (Cdc48 subfamily) AhyD4_RS13205 PF17871 AAA lid domain AhyD4_RS13205 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS13205 PF10431 C-terminal, D2-small domain, of ClpB protein AhyD4_RS13215 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AhyD4_RS13235 PF05947 Type VI secretion system, TssF AhyD4_RS13245 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AhyD4_RS13275 PF04717 Type VI secretion system, phage-baseplate injector AhyD4_RS13280 PF05638 Type VI secretion system effector, Hcp AhyD4_RS13295 PF10722 Putative bacterial sensory transduction regulator AhyD4_RS13305 PF00265 Thymidine kinase AhyD4_RS13310 PF03553 Na+/H+ antiporter family AhyD4_RS13315 PF00816 H-NS histone family AhyD4_RS13320 PF01923 Cobalamin adenosyltransferase AhyD4_RS13325 PF12843 Putative quorum-sensing-regulated virulence factor AhyD4_RS13330 PF04055 Radical SAM superfamily AhyD4_RS13335 PF06508 Queuosine biosynthesis protein QueC AhyD4_RS13350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AhyD4_RS13355 PF18073 Rubredoxin metal binding domain AhyD4_RS13365 PF00216 Bacterial DNA-binding protein AhyD4_RS13370 PF00575 S1 RNA binding domain AhyD4_RS13375 PF02224 Cytidylate kinase AhyD4_RS13380 PF00925 GTP cyclohydrolase II AhyD4_RS13385 PF03466 LysR substrate binding domain AhyD4_RS13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS13390 PF03466 LysR substrate binding domain AhyD4_RS13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS13395 PF07690 Major Facilitator Superfamily AhyD4_RS13410 PF00881 Nitroreductase family AhyD4_RS13415 PF00563 EAL domain AhyD4_RS13415 PF13188 PAS domain AhyD4_RS13415 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS13415 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS13425 PF03466 LysR substrate binding domain AhyD4_RS13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS13430 PF00072 Response regulator receiver domain AhyD4_RS13440 PF01212 Beta-eliminating lyase AhyD4_RS13455 PF00248 Aldo/keto reductase family AhyD4_RS13460 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AhyD4_RS13470 PF03411 Penicillin-insensitive murein endopeptidase AhyD4_RS13480 PF04536 TPM domain AhyD4_RS13495 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS13500 PF13677 Membrane MotB of proton-channel complex MotA/MotB AhyD4_RS13500 PF00691 OmpA family AhyD4_RS13505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AhyD4_RS13510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AhyD4_RS13515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AhyD4_RS13515 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AhyD4_RS13525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AhyD4_RS13525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AhyD4_RS13530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AhyD4_RS13530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS13530 PF00384 Molybdopterin oxidoreductase AhyD4_RS13535 PF00146 NADH dehydrogenase AhyD4_RS13540 PF12838 4Fe-4S dicluster domain AhyD4_RS13545 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AhyD4_RS13550 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AhyD4_RS13555 PF00361 Proton-conducting membrane transporter AhyD4_RS13555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AhyD4_RS13560 PF00361 Proton-conducting membrane transporter AhyD4_RS13565 PF00361 Proton-conducting membrane transporter AhyD4_RS13575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AhyD4_RS13575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AhyD4_RS13575 PF02769 AIR synthase related protein, C-terminal domain AhyD4_RS13580 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS13580 PF01464 Transglycosylase SLT domain AhyD4_RS13585 PF07191 zinc-ribbons AhyD4_RS13590 PF01926 50S ribosome-binding GTPase AhyD4_RS13590 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AhyD4_RS13595 PF13360 PQQ-like domain AhyD4_RS13600 PF09976 Tetratricopeptide repeat-like domain AhyD4_RS13605 PF03129 Anticodon binding domain AhyD4_RS13605 PF13393 Histidyl-tRNA synthetase AhyD4_RS13610 PF04551 GcpE protein AhyD4_RS13615 PF13464 Domain of unknown function (DUF4115) AhyD4_RS13625 PF04055 Radical SAM superfamily AhyD4_RS13630 PF00334 Nucleoside diphosphate kinase AhyD4_RS13635 PF00883 Cytosol aminopeptidase family, catalytic domain AhyD4_RS13635 PF12404 Peptidase AhyD4_RS13640 PF12404 Peptidase AhyD4_RS13640 PF00883 Cytosol aminopeptidase family, catalytic domain AhyD4_RS13645 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS13650 PF00012 Hsp70 protein AhyD4_RS13655 PF07743 HSCB C-terminal oligomerisation domain AhyD4_RS13660 PF01521 Iron-sulphur cluster biosynthesis AhyD4_RS13665 PF01592 NifU-like N terminal domain AhyD4_RS13670 PF00266 Aminotransferase class-V AhyD4_RS13675 PF02082 Transcriptional regulator AhyD4_RS13680 PF00588 SpoU rRNA Methylase family AhyD4_RS13690 PF02036 SCP-2 sterol transfer family AhyD4_RS13695 PF01136 Peptidase family U32 AhyD4_RS13700 PF01136 Peptidase family U32 AhyD4_RS13705 PF13181 Tetratricopeptide repeat AhyD4_RS13705 PF07719 Tetratricopeptide repeat AhyD4_RS13715 PF07549 SecD/SecF GG Motif AhyD4_RS13715 PF02355 Protein export membrane protein AhyD4_RS13720 PF07549 SecD/SecF GG Motif AhyD4_RS13720 PF02355 Protein export membrane protein AhyD4_RS13720 PF13721 SecD export protein N-terminal TM region AhyD4_RS13725 PF02699 Preprotein translocase subunit AhyD4_RS13730 PF01702 Queuine tRNA-ribosyltransferase AhyD4_RS13735 PF02547 Queuosine biosynthesis protein AhyD4_RS13740 PF00571 CBS domain AhyD4_RS13745 PF00578 AhpC/TSA family AhyD4_RS13745 PF10417 C-terminal domain of 1-Cys peroxiredoxin AhyD4_RS13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS13750 PF13192 Thioredoxin domain AhyD4_RS13755 PF07690 Major Facilitator Superfamily AhyD4_RS13765 PF08241 Methyltransferase domain AhyD4_RS13770 PF03960 ArsC family AhyD4_RS13775 PF01758 Sodium Bile acid symporter family AhyD4_RS13780 PF01022 Bacterial regulatory protein, arsR family AhyD4_RS13785 PF02347 Glycine cleavage system P-protein AhyD4_RS13790 PF01597 Glycine cleavage H-protein AhyD4_RS13795 PF01571 Aminomethyltransferase folate-binding domain AhyD4_RS13795 PF08669 Glycine cleavage T-protein C-terminal barrel domain AhyD4_RS13800 PF01494 FAD binding domain AhyD4_RS13805 PF01494 FAD binding domain AhyD4_RS13810 PF03695 Uncharacterised protein family (UPF0149) AhyD4_RS13815 PF05164 Cell division protein ZapA AhyD4_RS13825 PF07690 Major Facilitator Superfamily AhyD4_RS13830 PF00043 Glutathione S-transferase, C-terminal domain AhyD4_RS13830 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS13840 PF00459 Inositol monophosphatase family AhyD4_RS13845 PF00672 HAMP domain AhyD4_RS13845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS13850 PF02535 ZIP Zinc transporter AhyD4_RS13860 PF01048 Phosphorylase superfamily AhyD4_RS13870 PF01497 Periplasmic binding protein AhyD4_RS13875 PF02719 Polysaccharide biosynthesis protein AhyD4_RS13880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AhyD4_RS13895 PF00202 Aminotransferase class-III AhyD4_RS13905 PF08666 SAF domain AhyD4_RS13905 PF03102 NeuB family AhyD4_RS13925 PF02561 Flagellar protein FliS AhyD4_RS13930 PF02465 Flagellar hook-associated protein 2 N-terminus AhyD4_RS13930 PF07196 Flagellin hook IN motif AhyD4_RS13930 PF07195 Flagellar hook-associated protein 2 C-terminus AhyD4_RS13940 PF00669 Bacterial flagellin N-terminal helical region AhyD4_RS13940 PF00700 Bacterial flagellin C-terminal helical region AhyD4_RS13940 PF07196 Flagellin hook IN motif AhyD4_RS13945 PF01527 Transposase AhyD4_RS13950 PF00665 Integrase core domain AhyD4_RS13955 PF00700 Bacterial flagellin C-terminal helical region AhyD4_RS13955 PF00669 Bacterial flagellin N-terminal helical region AhyD4_RS13955 PF07196 Flagellin hook IN motif AhyD4_RS13960 PF07196 Flagellin hook IN motif AhyD4_RS13960 PF00700 Bacterial flagellin C-terminal helical region AhyD4_RS13960 PF00669 Bacterial flagellin N-terminal helical region AhyD4_RS13965 PF03458 UPF0126 domain AhyD4_RS13975 PF02926 THUMP domain AhyD4_RS13975 PF02568 Thiamine biosynthesis protein (ThiI) AhyD4_RS13985 PF06832 Penicillin-Binding Protein C-terminus Family AhyD4_RS13985 PF00912 Transglycosylase AhyD4_RS13985 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS13990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AhyD4_RS13990 PF17962 Bacterial macroglobulin domain 6 AhyD4_RS13990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AhyD4_RS13990 PF01835 MG2 domain AhyD4_RS13990 PF00207 Alpha-2-macroglobulin family AhyD4_RS13990 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AhyD4_RS13990 PF07703 Alpha-2-macroglobulin bait region domain AhyD4_RS13990 PF07678 A-macroglobulin TED domain AhyD4_RS13990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AhyD4_RS13995 PF07687 Peptidase dimerisation domain AhyD4_RS13995 PF01546 Peptidase family M20/M25/M40 AhyD4_RS14000 PF01594 AI-2E family transporter AhyD4_RS14005 PF02321 Outer membrane efflux protein AhyD4_RS14010 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS14010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS14025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS14025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhyD4_RS14030 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS14030 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS14030 PF00563 EAL domain AhyD4_RS14035 PF04055 Radical SAM superfamily AhyD4_RS14045 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS14050 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS14055 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS14060 PF00005 ABC transporter AhyD4_RS14065 PF03956 Lysine exporter LysO AhyD4_RS14070 PF01979 Amidohydrolase family AhyD4_RS14075 PF04336 Acyl carrier protein phosphodiesterase AhyD4_RS14090 PF03960 ArsC family AhyD4_RS14095 PF00578 AhpC/TSA family AhyD4_RS14100 PF01435 Peptidase family M48 AhyD4_RS14100 PF13181 Tetratricopeptide repeat AhyD4_RS14105 PF01206 Sulfurtransferase TusA AhyD4_RS14110 PF01594 AI-2E family transporter AhyD4_RS14120 PF00561 alpha/beta hydrolase fold AhyD4_RS14125 PF03976 Polyphosphate kinase 2 (PPK2) AhyD4_RS14130 PF00005 ABC transporter AhyD4_RS14130 PF08402 TOBE domain AhyD4_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS14140 PF14785 Maltose transport system permease protein MalF P2 domain AhyD4_RS14140 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS14145 PF01547 Bacterial extracellular solute-binding protein AhyD4_RS14150 PF04245 37-kD nucleoid-associated bacterial protein AhyD4_RS14155 PF07208 Protein of unknown function (DUF1414) AhyD4_RS14160 PF11893 Domain of unknown function (DUF3413) AhyD4_RS14160 PF00884 Sulfatase AhyD4_RS14165 PF00593 TonB dependent receptor AhyD4_RS14165 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS14170 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AhyD4_RS14170 PF00326 Prolyl oligopeptidase family AhyD4_RS14190 PF03974 Ecotin AhyD4_RS14195 PF04219 Protein of unknown function, DUF AhyD4_RS14200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS14200 PF03466 LysR substrate binding domain AhyD4_RS14205 PF02153 Prephenate dehydrogenase AhyD4_RS14205 PF01817 Chorismate mutase type II AhyD4_RS14210 PF00793 DAHP synthetase I family AhyD4_RS14215 PF03009 Glycerophosphoryl diester phosphodiesterase family AhyD4_RS14220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AhyD4_RS14220 PF01266 FAD dependent oxidoreductase AhyD4_RS14225 PF00455 DeoR C terminal sensor domain AhyD4_RS14225 PF08220 DeoR-like helix-turn-helix domain AhyD4_RS14230 PF07690 Major Facilitator Superfamily AhyD4_RS14235 PF00230 Major intrinsic protein AhyD4_RS14240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AhyD4_RS14240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AhyD4_RS14245 PF03466 LysR substrate binding domain AhyD4_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS14265 PF00248 Aldo/keto reductase family AhyD4_RS14270 PF07690 Major Facilitator Superfamily AhyD4_RS14280 PF02322 Cytochrome bd terminal oxidase subunit II AhyD4_RS14285 PF01654 Cytochrome bd terminal oxidase subunit I AhyD4_RS14290 PF00155 Aminotransferase class I and II AhyD4_RS14290 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS14300 PF04391 Protein of unknown function (DUF533) AhyD4_RS14320 PF07690 Major Facilitator Superfamily AhyD4_RS14325 PF03466 LysR substrate binding domain AhyD4_RS14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS14335 PF07690 Major Facilitator Superfamily AhyD4_RS14340 PF00849 RNA pseudouridylate synthase AhyD4_RS14340 PF01479 S4 domain AhyD4_RS14345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AhyD4_RS14345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AhyD4_RS14365 PF00271 Helicase conserved C-terminal domain AhyD4_RS14365 PF04851 Type III restriction enzyme, res subunit AhyD4_RS14370 PF00300 Histidine phosphatase superfamily (branch 1) AhyD4_RS14375 PF08348 YheO-like PAS domain AhyD4_RS14375 PF13309 HTH domain AhyD4_RS14380 PF03313 Serine dehydratase alpha chain AhyD4_RS14385 PF01042 Endoribonuclease L-PSP AhyD4_RS14395 PF00672 HAMP domain AhyD4_RS14395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS14410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AhyD4_RS14410 PF17944 Arginine decarboxylase C-terminal helical extension AhyD4_RS14410 PF17810 Arginine decarboxylase helical bundle domain AhyD4_RS14415 PF07687 Peptidase dimerisation domain AhyD4_RS14415 PF01546 Peptidase family M20/M25/M40 AhyD4_RS14440 PF04264 YceI-like domain AhyD4_RS14445 PF03466 LysR substrate binding domain AhyD4_RS14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS14455 PF01268 Formate--tetrahydrofolate ligase AhyD4_RS14460 PF17200 Single Cache domain 2 AhyD4_RS14460 PF00672 HAMP domain AhyD4_RS14460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS14465 PF01227 GTP cyclohydrolase I AhyD4_RS14470 PF03453 MoeA N-terminal region (domain I and II) AhyD4_RS14470 PF00994 Probable molybdopterin binding domain AhyD4_RS14470 PF03454 MoeA C-terminal region (domain IV) AhyD4_RS14475 PF00899 ThiF family AhyD4_RS14480 PF00561 alpha/beta hydrolase fold AhyD4_RS14485 PF03459 TOBE domain AhyD4_RS14485 PF00005 ABC transporter AhyD4_RS14490 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS14500 PF02391 MoaE protein AhyD4_RS14505 PF02597 ThiS family AhyD4_RS14510 PF01967 MoaC family AhyD4_RS14515 PF00994 Probable molybdopterin binding domain AhyD4_RS14520 PF03264 NapC/NirT cytochrome c family, N-terminal region AhyD4_RS14525 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AhyD4_RS14530 PF12801 4Fe-4S binding domain AhyD4_RS14530 PF13237 4Fe-4S dicluster domain AhyD4_RS14535 PF12838 4Fe-4S dicluster domain AhyD4_RS14535 PF12800 4Fe-4S binding domain AhyD4_RS14540 PF10518 TAT (twin-arginine translocation) pathway signal sequence AhyD4_RS14540 PF01568 Molydopterin dinucleotide binding domain AhyD4_RS14540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhyD4_RS14540 PF00384 Molybdopterin oxidoreductase AhyD4_RS14550 PF00037 4Fe-4S binding domain AhyD4_RS14550 PF12800 4Fe-4S binding domain AhyD4_RS14550 PF13187 4Fe-4S dicluster domain AhyD4_RS14555 PF04055 Radical SAM superfamily AhyD4_RS14555 PF06463 Molybdenum Cofactor Synthesis C AhyD4_RS14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS14560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AhyD4_RS14560 PF00672 HAMP domain AhyD4_RS14560 PF07730 Histidine kinase AhyD4_RS14565 PF00072 Response regulator receiver domain AhyD4_RS14565 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS14575 PF00072 Response regulator receiver domain AhyD4_RS14575 PF01627 Hpt domain AhyD4_RS14575 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS14575 PF00672 HAMP domain AhyD4_RS14575 PF17149 Periplasmic sensor domain found in signal transduction proteins AhyD4_RS14585 PF01933 Uncharacterised protein family UPF0052 AhyD4_RS14595 PF13230 Glutamine amidotransferases class-II AhyD4_RS14600 PF13580 SIS domain AhyD4_RS14605 PF09317 Domain of unknown function (DUF1974) AhyD4_RS14605 PF02770 Acyl-CoA dehydrogenase, middle domain AhyD4_RS14605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhyD4_RS14605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhyD4_RS14610 PF11849 Domain of unknown function (DUF3369) AhyD4_RS14620 PF00929 Exonuclease AhyD4_RS14625 PF00075 RNase H AhyD4_RS14630 PF08241 Methyltransferase domain AhyD4_RS14635 PF16123 Hydroxyacylglutathione hydrolase C-terminus AhyD4_RS14635 PF00753 Metallo-beta-lactamase superfamily AhyD4_RS14640 PF01476 LysM domain AhyD4_RS14640 PF01464 Transglycosylase SLT domain AhyD4_RS14645 PF03372 Endonuclease/Exonuclease/phosphatase family AhyD4_RS14655 PF03061 Thioesterase superfamily AhyD4_RS14665 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS14670 PF14718 Soluble lytic murein transglycosylase L domain AhyD4_RS14670 PF01464 Transglycosylase SLT domain AhyD4_RS14675 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS14675 PF00563 EAL domain AhyD4_RS14675 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS14680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AhyD4_RS14700 PF04357 TamB, inner membrane protein subunit of TAM complex AhyD4_RS14705 PF01103 Surface antigen AhyD4_RS14705 PF07244 Surface antigen variable number repeat AhyD4_RS14705 PF17243 POTRA domain TamA domain 1 AhyD4_RS14720 PF01625 Peptide methionine sulfoxide reductase AhyD4_RS14730 PF02627 Carboxymuconolactone decarboxylase family AhyD4_RS14735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhyD4_RS14735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS14735 PF00403 Heavy-metal-associated domain AhyD4_RS14740 PF13416 Bacterial extracellular solute-binding protein AhyD4_RS14750 PF00005 ABC transporter AhyD4_RS14755 PF01066 CDP-alcohol phosphatidyltransferase AhyD4_RS14760 PF13406 Transglycosylase SLT domain AhyD4_RS14765 PF01047 MarR family AhyD4_RS14775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AhyD4_RS14775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AhyD4_RS14775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhyD4_RS14775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AhyD4_RS14780 PF17206 SeqA protein N-terminal domain AhyD4_RS14780 PF03925 SeqA protein C-terminal domain AhyD4_RS14785 PF12697 Alpha/beta hydrolase family AhyD4_RS14795 PF01402 Ribbon-helix-helix protein, copG family AhyD4_RS14800 PF00258 Flavodoxin AhyD4_RS14810 PF01475 Ferric uptake regulator family AhyD4_RS14815 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhyD4_RS14815 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AhyD4_RS14820 PF02838 Glycosyl hydrolase family 20, domain 2 AhyD4_RS14820 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AhyD4_RS14820 PF00728 Glycosyl hydrolase family 20, catalytic domain AhyD4_RS14820 PF03173 Putative carbohydrate binding domain AhyD4_RS14825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AhyD4_RS14825 PF02378 Phosphotransferase system, EIIC AhyD4_RS14825 PF00367 phosphotransferase system, EIIB AhyD4_RS14830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AhyD4_RS14835 PF01979 Amidohydrolase family AhyD4_RS14840 PF00480 ROK family AhyD4_RS14840 PF01047 MarR family AhyD4_RS14845 PF08019 Phosphoethanolamine transferase EptA/EptB AhyD4_RS14845 PF00884 Sulfatase AhyD4_RS14850 PF01709 Transcriptional regulator AhyD4_RS14855 PF01336 OB-fold nucleic acid binding domain AhyD4_RS14855 PF00152 tRNA synthetases class II (D, K and N) AhyD4_RS14855 PF02938 GAD domain AhyD4_RS14860 PF01904 Protein of unknown function DUF72 AhyD4_RS14865 PF13649 Methyltransferase domain AhyD4_RS14870 PF08003 Protein of unknown function (DUF1698) AhyD4_RS14890 PF00578 AhpC/TSA family AhyD4_RS14890 PF10417 C-terminal domain of 1-Cys peroxiredoxin AhyD4_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS14895 PF03466 LysR substrate binding domain AhyD4_RS14900 PF12563 Hemolytic toxin N terminal AhyD4_RS14900 PF07968 Leukocidin/Hemolysin toxin family AhyD4_RS14905 PF00877 NlpC/P60 family AhyD4_RS14915 PF00171 Aldehyde dehydrogenase family AhyD4_RS14920 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS14920 PF08359 YsiA-like protein, C-terminal region AhyD4_RS14930 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS14940 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS14960 PF01554 MatE AhyD4_RS14980 PF01804 Penicillin amidase AhyD4_RS14985 PF10371 Domain of unknown function AhyD4_RS14985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS14985 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AhyD4_RS14985 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AhyD4_RS14985 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AhyD4_RS14990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AhyD4_RS14990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AhyD4_RS14990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS14995 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS14995 PF03473 MOSC domain AhyD4_RS14995 PF03476 MOSC N-terminal beta barrel domain AhyD4_RS14995 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS14995 PF03476 MOSC N-terminal beta barrel domain AhyD4_RS14995 PF03473 MOSC domain AhyD4_RS15000 PF08447 PAS fold AhyD4_RS15000 PF13426 PAS domain AhyD4_RS15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS15005 PF01435 Peptidase family M48 AhyD4_RS15015 PF12697 Alpha/beta hydrolase family AhyD4_RS15015 PF08241 Methyltransferase domain AhyD4_RS15020 PF00155 Aminotransferase class I and II AhyD4_RS15025 PF04055 Radical SAM superfamily AhyD4_RS15025 PF06968 Biotin and Thiamin Synthesis associated domain AhyD4_RS15030 PF00202 Aminotransferase class-III AhyD4_RS15045 PF01336 OB-fold nucleic acid binding domain AhyD4_RS15045 PF00152 tRNA synthetases class II (D, K and N) AhyD4_RS15050 PF03605 Anaerobic c4-dicarboxylate membrane transporter AhyD4_RS15060 PF01546 Peptidase family M20/M25/M40 AhyD4_RS15060 PF07687 Peptidase dimerisation domain AhyD4_RS15065 PF03606 C4-dicarboxylate anaerobic carrier AhyD4_RS15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS15075 PF03466 LysR substrate binding domain AhyD4_RS15080 PF03960 ArsC family AhyD4_RS15085 PF07687 Peptidase dimerisation domain AhyD4_RS15085 PF01546 Peptidase family M20/M25/M40 AhyD4_RS15090 PF02557 D-alanyl-D-alanine carboxypeptidase AhyD4_RS15095 PF02080 TrkA-C domain AhyD4_RS15095 PF00999 Sodium/hydrogen exchanger family AhyD4_RS15095 PF03471 Transporter associated domain AhyD4_RS15105 PF03471 Transporter associated domain AhyD4_RS15105 PF00999 Sodium/hydrogen exchanger family AhyD4_RS15105 PF02080 TrkA-C domain AhyD4_RS15115 PF01810 LysE type translocator AhyD4_RS15120 PF00672 HAMP domain AhyD4_RS15120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS15125 PF07509 Protein of unknown function (DUF1523) AhyD4_RS15140 PF01156 Inosine-uridine preferring nucleoside hydrolase AhyD4_RS15145 PF00849 RNA pseudouridylate synthase AhyD4_RS15150 PF01048 Phosphorylase superfamily AhyD4_RS15155 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS15190 PF00437 Type II/IV secretion system protein AhyD4_RS15205 PF00263 Bacterial type II and III secretion system protein AhyD4_RS15205 PF04972 BON domain AhyD4_RS15205 PF13629 Pilus formation protein N terminal region AhyD4_RS15235 PF04355 SmpA / OmlA family AhyD4_RS15240 PF13460 NAD(P)H-binding AhyD4_RS15245 PF03658 RnfH family Ubiquitin AhyD4_RS15250 PF03364 Polyketide cyclase / dehydrase and lipid transport AhyD4_RS15255 PF01668 SmpB protein AhyD4_RS15265 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AhyD4_RS15265 PF04851 Type III restriction enzyme, res subunit AhyD4_RS15265 PF00271 Helicase conserved C-terminal domain AhyD4_RS15265 PF08463 EcoEI R protein C-terminal AhyD4_RS15345 PF10124 Mu-like prophage major head subunit gpT AhyD4_RS15350 PF10123 Mu-like prophage I protein AhyD4_RS15370 PF06074 Protein of unknown function (DUF935) AhyD4_RS15375 PF03237 Terminase-like family AhyD4_RS15380 PF11985 Protein of unknown function (DUF3486) AhyD4_RS15385 PF08461 Ribonuclease R winged-helix domain AhyD4_RS15420 PF08765 Mor transcription activator family AhyD4_RS15490 PF04851 Type III restriction enzyme, res subunit AhyD4_RS15490 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AhyD4_RS15490 PF00271 Helicase conserved C-terminal domain AhyD4_RS15490 PF08463 EcoEI R protein C-terminal AhyD4_RS15495 PF12161 HsdM N-terminal domain AhyD4_RS15495 PF02384 N-6 DNA Methylase AhyD4_RS15500 PF01420 Type I restriction modification DNA specificity domain AhyD4_RS15530 PF03466 LysR substrate binding domain AhyD4_RS15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS15535 PF02447 GntP family permease AhyD4_RS15540 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS15545 PF00180 Isocitrate/isopropylmalate dehydrogenase AhyD4_RS15550 PF12833 Helix-turn-helix domain AhyD4_RS15555 PF01238 Phosphomannose isomerase type I AhyD4_RS15575 PF00155 Aminotransferase class I and II AhyD4_RS15580 PF02378 Phosphotransferase system, EIIC AhyD4_RS15580 PF00367 phosphotransferase system, EIIB AhyD4_RS15585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS15585 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS15600 PF00583 Acetyltransferase (GNAT) family AhyD4_RS15620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AhyD4_RS15620 PF02378 Phosphotransferase system, EIIC AhyD4_RS15620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS15625 PF07690 Major Facilitator Superfamily AhyD4_RS15630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AhyD4_RS15640 PF00849 RNA pseudouridylate synthase AhyD4_RS15645 PF00293 NUDIX domain AhyD4_RS15655 PF04356 Protein of unknown function (DUF489) AhyD4_RS15660 PF00206 Lyase AhyD4_RS15660 PF08328 Adenylosuccinate lyase C-terminal AhyD4_RS15665 PF08007 Cupin superfamily protein AhyD4_RS15675 PF13508 Acetyltransferase (GNAT) domain AhyD4_RS15685 PF02798 Glutathione S-transferase, N-terminal domain AhyD4_RS15690 PF01243 Pyridoxamine 5'-phosphate oxidase AhyD4_RS15690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AhyD4_RS15705 PF01029 NusB family AhyD4_RS15705 PF01189 16S rRNA methyltransferase RsmB/F AhyD4_RS15710 PF00462 Glutaredoxin AhyD4_RS15715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AhyD4_RS15715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AhyD4_RS15720 PF04333 MlaA lipoprotein AhyD4_RS15725 PF03918 Cytochrome C biogenesis protein AhyD4_RS15730 PF03918 Cytochrome C biogenesis protein AhyD4_RS15735 PF08534 Redoxin AhyD4_RS15740 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AhyD4_RS15740 PF01578 Cytochrome C assembly protein AhyD4_RS15745 PF03100 CcmE AhyD4_RS15750 PF04995 Heme exporter protein D (CcmD) AhyD4_RS15755 PF01578 Cytochrome C assembly protein AhyD4_RS15760 PF03379 CcmB protein AhyD4_RS15765 PF00005 ABC transporter AhyD4_RS15775 PF01584 CheW-like domain AhyD4_RS15785 PF13614 AAA domain AhyD4_RS15790 PF13677 Membrane MotB of proton-channel complex MotA/MotB AhyD4_RS15790 PF00691 OmpA family AhyD4_RS15795 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS15800 PF01339 CheB methylesterase AhyD4_RS15800 PF00072 Response regulator receiver domain AhyD4_RS15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS15805 PF00072 Response regulator receiver domain AhyD4_RS15805 PF02895 Signal transducing histidine kinase, homodimeric domain AhyD4_RS15805 PF01627 Hpt domain AhyD4_RS15805 PF01584 CheW-like domain AhyD4_RS15810 PF04344 Chemotaxis phosphatase, CheZ AhyD4_RS15815 PF00072 Response regulator receiver domain AhyD4_RS15820 PF04545 Sigma-70, region 4 AhyD4_RS15820 PF04539 Sigma-70 region 3 AhyD4_RS15820 PF04542 Sigma-70 region 2 AhyD4_RS15825 PF10609 NUBPL iron-transfer P-loop NTPase AhyD4_RS15830 PF00448 SRP54-type protein, GTPase domain AhyD4_RS15835 PF00771 FHIPEP family AhyD4_RS15840 PF01312 FlhB HrpN YscU SpaS Family AhyD4_RS15845 PF01311 Bacterial export proteins, family 1 AhyD4_RS15850 PF01313 Bacterial export proteins, family 3 AhyD4_RS15855 PF00813 FliP family AhyD4_RS15860 PF04347 Flagellar biosynthesis protein, FliO AhyD4_RS15865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AhyD4_RS15870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AhyD4_RS15870 PF02154 Flagellar motor switch protein FliM AhyD4_RS15890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhyD4_RS15890 PF18269 T3SS EscN ATPase C-terminal domain AhyD4_RS15900 PF14842 FliG N-terminal domain AhyD4_RS15900 PF14841 FliG middle domain AhyD4_RS15900 PF01706 FliG C-terminal domain AhyD4_RS15905 PF08345 Flagellar M-ring protein C-terminal AhyD4_RS15905 PF01514 Secretory protein of YscJ/FliF family AhyD4_RS15910 PF02049 Flagellar hook-basal body complex protein FliE AhyD4_RS15920 PF00072 Response regulator receiver domain AhyD4_RS15925 PF04055 Radical SAM superfamily AhyD4_RS15925 PF00919 Uncharacterized protein family UPF0004 AhyD4_RS15925 PF18693 TRAM domain AhyD4_RS15935 PF11647 Membrane Localization Domain AhyD4_RS15935 PF16671 Actin cross-linking domain AhyD4_RS15935 PF12146 Serine aminopeptidase, S33 AhyD4_RS15935 PF11713 Peptidase C80 family AhyD4_RS15935 PF07634 RtxA repeat AhyD4_RS15950 PF00005 ABC transporter AhyD4_RS15950 PF03412 Peptidase C39 family AhyD4_RS15950 PF00664 ABC transporter transmembrane region AhyD4_RS15960 PF03412 Peptidase C39 family AhyD4_RS15960 PF00664 ABC transporter transmembrane region AhyD4_RS15960 PF00005 ABC transporter AhyD4_RS15965 PF00072 Response regulator receiver domain AhyD4_RS15965 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS15975 PF02685 Glucokinase AhyD4_RS15980 PF01380 SIS domain AhyD4_RS15980 PF01418 Helix-turn-helix domain, rpiR family AhyD4_RS15985 PF02887 Pyruvate kinase, alpha/beta domain AhyD4_RS15985 PF00224 Pyruvate kinase, barrel domain AhyD4_RS15995 PF00873 AcrB/AcrD/AcrF family AhyD4_RS16000 PF09317 Domain of unknown function (DUF1974) AhyD4_RS16000 PF02770 Acyl-CoA dehydrogenase, middle domain AhyD4_RS16000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhyD4_RS16000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhyD4_RS16005 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS16020 PF00384 Molybdopterin oxidoreductase AhyD4_RS16025 PF02634 FdhD/NarQ family AhyD4_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS16030 PF03466 LysR substrate binding domain AhyD4_RS16050 PF00936 BMC domain AhyD4_RS16055 PF00936 BMC domain AhyD4_RS16060 PF00936 BMC domain AhyD4_RS16065 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS16065 PF00171 Aldehyde dehydrogenase family AhyD4_RS16075 PF00171 Aldehyde dehydrogenase family AhyD4_RS16075 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS16080 PF01228 Glycine radical AhyD4_RS16080 PF02901 Pyruvate formate lyase-like AhyD4_RS16085 PF04055 Radical SAM superfamily AhyD4_RS16085 PF13187 4Fe-4S dicluster domain AhyD4_RS16090 PF00936 BMC domain AhyD4_RS16095 PF06130 Phosphate propanoyltransferase AhyD4_RS16105 PF00893 Small Multidrug Resistance protein AhyD4_RS16110 PF00893 Small Multidrug Resistance protein AhyD4_RS16140 PF04074 YhcH/YjgK/YiaL AhyD4_RS16145 PF00474 Sodium:solute symporter family AhyD4_RS16150 PF00480 ROK family AhyD4_RS16155 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AhyD4_RS16160 PF01380 SIS domain AhyD4_RS16160 PF01418 Helix-turn-helix domain, rpiR family AhyD4_RS16165 PF00701 Dihydrodipicolinate synthetase family AhyD4_RS16170 PF00141 Peroxidase AhyD4_RS16175 PF08220 DeoR-like helix-turn-helix domain AhyD4_RS16175 PF00455 DeoR C terminal sensor domain AhyD4_RS16180 PF07690 Major Facilitator Superfamily AhyD4_RS16185 PF07882 L-fucose isomerase, second N-terminal domain AhyD4_RS16185 PF07881 L-fucose isomerase, first N-terminal domain AhyD4_RS16185 PF02952 L-fucose isomerase, C-terminal domain AhyD4_RS16190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AhyD4_RS16190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AhyD4_RS16200 PF05025 RbsD / FucU transport protein family AhyD4_RS16205 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS16210 PF00005 ABC transporter AhyD4_RS16210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhyD4_RS16215 PF12911 N-terminal TM domain of oligopeptide transport permease C AhyD4_RS16215 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS16220 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS16225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS16235 PF17969 L,D-transpeptidase C-terminal domain AhyD4_RS16235 PF01476 LysM domain AhyD4_RS16235 PF03734 L,D-transpeptidase catalytic domain AhyD4_RS16245 PF01575 MaoC like domain AhyD4_RS16250 PF05971 RNA methyltransferase AhyD4_RS16255 PF00877 NlpC/P60 family AhyD4_RS16260 PF01648 4'-phosphopantetheinyl transferase superfamily AhyD4_RS16265 PF00085 Thioredoxin AhyD4_RS16275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AhyD4_RS16280 PF00551 Formyl transferase AhyD4_RS16280 PF01842 ACT domain AhyD4_RS16290 PF13396 Phospholipase_D-nuclease N-terminal AhyD4_RS16290 PF13091 PLD-like domain AhyD4_RS16305 PF01551 Peptidase family M23 AhyD4_RS16310 PF00128 Alpha amylase, catalytic domain AhyD4_RS16315 PF01551 Peptidase family M23 AhyD4_RS16315 PF10145 Phage-related minor tail protein AhyD4_RS16315 PF01464 Transglycosylase SLT domain AhyD4_RS16320 PF00230 Major intrinsic protein AhyD4_RS16325 PF02075 Crossover junction endodeoxyribonuclease RuvC AhyD4_RS16335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhyD4_RS16355 PF04055 Radical SAM superfamily AhyD4_RS16355 PF11842 Domain of unknown function (DUF3362) AhyD4_RS16355 PF08497 Radical SAM N-terminal AhyD4_RS16365 PF00873 AcrB/AcrD/AcrF family AhyD4_RS16370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS16370 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS16375 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS16380 PF01734 Patatin-like phospholipase AhyD4_RS16385 PF00209 Sodium:neurotransmitter symporter family AhyD4_RS16400 PF00691 OmpA family AhyD4_RS16400 PF01389 OmpA-like transmembrane domain AhyD4_RS16405 PF00691 OmpA family AhyD4_RS16405 PF01389 OmpA-like transmembrane domain AhyD4_RS16410 PF00691 OmpA family AhyD4_RS16410 PF01389 OmpA-like transmembrane domain AhyD4_RS16415 PF00390 Malic enzyme, N-terminal domain AhyD4_RS16415 PF03949 Malic enzyme, NAD binding domain AhyD4_RS16420 PF12833 Helix-turn-helix domain AhyD4_RS16425 PF01554 MatE AhyD4_RS16430 PF10692 Protein of unknown function (DUF2498) AhyD4_RS16435 PF00072 Response regulator receiver domain AhyD4_RS16435 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS16440 PF00860 Permease family AhyD4_RS16450 PF01235 Sodium:alanine symporter family AhyD4_RS16455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AhyD4_RS16455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AhyD4_RS16460 PF01699 Sodium/calcium exchanger protein AhyD4_RS16465 PF08534 Redoxin AhyD4_RS16475 PF00293 NUDIX domain AhyD4_RS16495 PF00005 ABC transporter AhyD4_RS16500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS16500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AhyD4_RS16505 PF03932 CutC family AhyD4_RS16510 PF00480 ROK family AhyD4_RS16520 PF01435 Peptidase family M48 AhyD4_RS16525 PF12849 PBP superfamily domain AhyD4_RS16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS16530 PF11808 Phosphate regulon sensor protein PhoR AhyD4_RS16530 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS16530 PF00989 PAS fold AhyD4_RS16535 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS16535 PF00072 Response regulator receiver domain AhyD4_RS16540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhyD4_RS16545 PF02515 CoA-transferase family III AhyD4_RS16550 PF02770 Acyl-CoA dehydrogenase, middle domain AhyD4_RS16550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhyD4_RS16550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhyD4_RS16555 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS16555 PF01590 GAF domain AhyD4_RS16555 PF00158 Sigma-54 interaction domain AhyD4_RS16560 PF00171 Aldehyde dehydrogenase family AhyD4_RS16570 PF00892 EamA-like transporter family AhyD4_RS16575 PF00072 Response regulator receiver domain AhyD4_RS16575 PF12431 Transcriptional regulator AhyD4_RS16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS16580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AhyD4_RS16580 PF17203 Single cache domain 3 AhyD4_RS16580 PF00989 PAS fold AhyD4_RS16585 PF03949 Malic enzyme, NAD binding domain AhyD4_RS16585 PF00390 Malic enzyme, N-terminal domain AhyD4_RS16590 PF03390 2-hydroxycarboxylate transporter family AhyD4_RS16595 PF01047 MarR family AhyD4_RS16600 PF00529 HlyD membrane-fusion protein of T1SS AhyD4_RS16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS16630 PF13597 Anaerobic ribonucleoside-triphosphate reductase AhyD4_RS16630 PF03477 ATP cone domain AhyD4_RS16640 PF12826 Helix-hairpin-helix motif AhyD4_RS16640 PF01653 NAD-dependent DNA ligase adenylation domain AhyD4_RS16640 PF00533 BRCA1 C Terminus (BRCT) domain AhyD4_RS16640 PF03120 NAD-dependent DNA ligase OB-fold domain AhyD4_RS16640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AhyD4_RS16645 PF04354 ZipA, C-terminal FtsZ-binding domain AhyD4_RS16650 PF06470 SMC proteins Flexible Hinge Domain AhyD4_RS16650 PF02463 RecF/RecN/SMC N terminal domain AhyD4_RS16660 PF03458 UPF0126 domain AhyD4_RS16670 PF05951 Bacterial protein of unknown function (DUF882) AhyD4_RS16675 PF03734 L,D-transpeptidase catalytic domain AhyD4_RS16675 PF01471 Putative peptidoglycan binding domain AhyD4_RS16690 PF00535 Glycosyl transferase family 2 AhyD4_RS16705 PF00128 Alpha amylase, catalytic domain AhyD4_RS16715 PF00072 Response regulator receiver domain AhyD4_RS16715 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS16735 PF02254 TrkA-N domain AhyD4_RS16735 PF02080 TrkA-C domain AhyD4_RS16735 PF00999 Sodium/hydrogen exchanger family AhyD4_RS16740 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS16745 PF11734 TilS substrate C-terminal domain AhyD4_RS16745 PF09179 TilS substrate binding domain AhyD4_RS16745 PF01171 PP-loop family AhyD4_RS16750 PF05649 Peptidase family M13 AhyD4_RS16750 PF01431 Peptidase family M13 AhyD4_RS16760 PF00005 ABC transporter AhyD4_RS16760 PF16326 ABC transporter C-terminal domain AhyD4_RS16760 PF12848 ABC transporter AhyD4_RS16765 PF13302 Acetyltransferase (GNAT) domain AhyD4_RS16770 PF13520 Amino acid permease AhyD4_RS16775 PF03466 LysR substrate binding domain AhyD4_RS16775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS16780 PF12706 Beta-lactamase superfamily domain AhyD4_RS16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS16790 PF03466 LysR substrate binding domain AhyD4_RS16800 PF08543 Phosphomethylpyrimidine kinase AhyD4_RS16805 PF01276 Orn/Lys/Arg decarboxylase, major domain AhyD4_RS16805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AhyD4_RS16805 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AhyD4_RS16810 PF13520 Amino acid permease AhyD4_RS16815 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS16815 PF18500 CadC C-terminal domain 1 AhyD4_RS16820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AhyD4_RS16825 PF01336 OB-fold nucleic acid binding domain AhyD4_RS16825 PF02811 PHP domain AhyD4_RS16825 PF14579 Helix-hairpin-helix motif AhyD4_RS16825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AhyD4_RS16825 PF07733 Bacterial DNA polymerase III alpha NTPase domain AhyD4_RS16830 PF01351 Ribonuclease HII AhyD4_RS16835 PF02684 Lipid-A-disaccharide synthetase AhyD4_RS16840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AhyD4_RS16840 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS16845 PF07977 FabA-like domain AhyD4_RS16850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AhyD4_RS16850 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS16855 PF03938 Outer membrane protein (OmpH-like) AhyD4_RS16860 PF07244 Surface antigen variable number repeat AhyD4_RS16860 PF01103 Surface antigen AhyD4_RS16865 PF02163 Peptidase family M50 AhyD4_RS16865 PF17820 PDZ domain AhyD4_RS16870 PF13288 DXP reductoisomerase C-terminal domain AhyD4_RS16870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AhyD4_RS16870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AhyD4_RS16880 PF01255 Putative undecaprenyl diphosphate synthase AhyD4_RS16885 PF01765 Ribosome recycling factor AhyD4_RS16890 PF00696 Amino acid kinase family AhyD4_RS16895 PF00889 Elongation factor TS AhyD4_RS16900 PF00318 Ribosomal protein S2 AhyD4_RS16905 PF00557 Metallopeptidase family M24 AhyD4_RS16910 PF01909 Nucleotidyltransferase domain AhyD4_RS16910 PF01842 ACT domain AhyD4_RS16910 PF08335 GlnD PII-uridylyltransferase AhyD4_RS16910 PF01966 HD domain AhyD4_RS16915 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AhyD4_RS16915 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS16915 PF14602 Hexapeptide repeat of succinyl-transferase AhyD4_RS16920 PF11944 Protein of unknown function (DUF3461) AhyD4_RS16925 PF02378 Phosphotransferase system, EIIC AhyD4_RS16925 PF00367 phosphotransferase system, EIIB AhyD4_RS16930 PF07148 Maltose operon periplasmic protein precursor (MalM) AhyD4_RS16935 PF02264 LamB porin AhyD4_RS16940 PF00258 Flavodoxin AhyD4_RS16945 PF00849 RNA pseudouridylate synthase AhyD4_RS16950 PF04287 tRNA pseudouridine synthase C AhyD4_RS16975 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AhyD4_RS16980 PF07348 Syd protein (SUKH-2) AhyD4_RS16985 PF14489 QueF-like protein AhyD4_RS16985 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AhyD4_RS16995 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS17000 PF03641 Possible lysine decarboxylase AhyD4_RS17000 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AhyD4_RS17000 PF11892 Domain of unknown function (DUF3412) AhyD4_RS17005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AhyD4_RS17005 PF01367 5'-3' exonuclease, C-terminal SAM fold AhyD4_RS17010 PF18324 Hypothetical protein TT1725 AhyD4_RS17010 PF00180 Isocitrate/isopropylmalate dehydrogenase AhyD4_RS17020 PF18125 RlmM ferredoxin-like domain AhyD4_RS17020 PF01728 FtsJ-like methyltransferase AhyD4_RS17025 PF04241 Protein of unknown function (DUF423) AhyD4_RS17035 PF03466 LysR substrate binding domain AhyD4_RS17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS17040 PF00672 HAMP domain AhyD4_RS17045 PF00817 impB/mucB/samB family AhyD4_RS17045 PF11798 IMS family HHH motif AhyD4_RS17045 PF11799 impB/mucB/samB family C-terminal domain AhyD4_RS17060 PF02424 ApbE family AhyD4_RS17065 PF00111 2Fe-2S iron-sulfur cluster binding domain AhyD4_RS17065 PF00970 Oxidoreductase FAD-binding domain AhyD4_RS17065 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS17070 PF02508 Rnf-Nqr subunit, membrane protein AhyD4_RS17075 PF02508 Rnf-Nqr subunit, membrane protein AhyD4_RS17080 PF04205 FMN-binding domain AhyD4_RS17085 PF03116 NQR2, RnfD, RnfE family AhyD4_RS17090 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AhyD4_RS17090 PF11973 NQRA C-terminal domain AhyD4_RS17095 PF01722 BolA-like protein AhyD4_RS17100 PF05175 Methyltransferase small domain AhyD4_RS17110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AhyD4_RS17120 PF07690 Major Facilitator Superfamily AhyD4_RS17125 PF03502 Nucleoside-specific channel-forming protein, Tsx AhyD4_RS17130 PF04461 Protein of unknown function (DUF520) AhyD4_RS17135 PF08546 Ketopantoate reductase PanE/ApbA C terminal AhyD4_RS17135 PF02558 Ketopantoate reductase PanE/ApbA AhyD4_RS17140 PF01965 DJ-1/PfpI family AhyD4_RS17145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhyD4_RS17145 PF00205 Thiamine pyrophosphate enzyme, central domain AhyD4_RS17145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS17150 PF03306 Alpha-acetolactate decarboxylase AhyD4_RS17155 PF03466 LysR substrate binding domain AhyD4_RS17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS17175 PF04717 Type VI secretion system, phage-baseplate injector AhyD4_RS17180 PF05638 Type VI secretion system effector, Hcp AhyD4_RS17185 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS17185 PF03472 Autoinducer binding domain AhyD4_RS17195 PF13462 Thioredoxin AhyD4_RS17195 PF06965 Na+/H+ antiporter 1 AhyD4_RS17200 PF16363 GDP-mannose 4,6 dehydratase AhyD4_RS17205 PF00042 Globin AhyD4_RS17205 PF00970 Oxidoreductase FAD-binding domain AhyD4_RS17205 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS17210 PF03063 Prismane/CO dehydrogenase family AhyD4_RS17215 PF00210 Ferritin-like domain AhyD4_RS17255 PF00106 short chain dehydrogenase AhyD4_RS17265 PF03441 FAD binding domain of DNA photolyase AhyD4_RS17265 PF00875 DNA photolyase AhyD4_RS17270 PF13411 MerR HTH family regulatory protein AhyD4_RS17275 PF08349 Protein of unknown function (DUF1722) AhyD4_RS17305 PF01817 Chorismate mutase type II AhyD4_RS17305 PF00800 Prephenate dehydratase AhyD4_RS17335 PF09588 YqaJ-like viral recombinase domain AhyD4_RS17380 PF04002 RadC-like JAB domain AhyD4_RS17390 PF04055 Radical SAM superfamily AhyD4_RS17395 PF06508 Queuosine biosynthesis protein QueC AhyD4_RS17410 PF00270 DEAD/DEAH box helicase AhyD4_RS17410 PF00570 HRDC domain AhyD4_RS17410 PF16124 RecQ zinc-binding AhyD4_RS17410 PF09382 RQC domain AhyD4_RS17410 PF00271 Helicase conserved C-terminal domain AhyD4_RS17430 PF09382 RQC domain AhyD4_RS17430 PF00570 HRDC domain AhyD4_RS17430 PF00271 Helicase conserved C-terminal domain AhyD4_RS17430 PF00270 DEAD/DEAH box helicase AhyD4_RS17430 PF16124 RecQ zinc-binding AhyD4_RS17435 PF12137 RNA polymerase recycling family C-terminal AhyD4_RS17435 PF00271 Helicase conserved C-terminal domain AhyD4_RS17435 PF18337 RapA N-terminal Tudor like domain AhyD4_RS17435 PF18339 RapA N-terminal Tudor like domain 1 AhyD4_RS17435 PF00176 SNF2 family N-terminal domain AhyD4_RS17440 PF00717 Peptidase S24-like AhyD4_RS17460 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS17460 PF00593 TonB dependent receptor AhyD4_RS17480 PF00005 ABC transporter AhyD4_RS17485 PF01590 GAF domain AhyD4_RS17485 PF00158 Sigma-54 interaction domain AhyD4_RS17505 PF01032 FecCD transport family AhyD4_RS17510 PF00005 ABC transporter AhyD4_RS17520 PF13649 Methyltransferase domain AhyD4_RS17525 PF00872 Transposase, Mutator family AhyD4_RS17540 PF03976 Polyphosphate kinase 2 (PPK2) AhyD4_RS17545 PF01740 STAS domain AhyD4_RS17545 PF00916 Sulfate permease family AhyD4_RS17550 PF07995 Glucose / Sorbosone dehydrogenase AhyD4_RS17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS17560 PF02743 Cache domain AhyD4_RS17560 PF00672 HAMP domain AhyD4_RS17565 PF03573 outer membrane porin, OprD family AhyD4_RS17570 PF00106 short chain dehydrogenase AhyD4_RS17590 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AhyD4_RS17605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhyD4_RS17605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AhyD4_RS17610 PF12392 Collagenase AhyD4_RS17610 PF01136 Peptidase family U32 AhyD4_RS17615 PF01810 LysE type translocator AhyD4_RS17620 PF03466 LysR substrate binding domain AhyD4_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS17625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AhyD4_RS17625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AhyD4_RS17630 PF02743 Cache domain AhyD4_RS17630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS17630 PF00672 HAMP domain AhyD4_RS17635 PF00072 Response regulator receiver domain AhyD4_RS17645 PF01627 Hpt domain AhyD4_RS17645 PF07194 P2 response regulator binding domain AhyD4_RS17645 PF02895 Signal transducing histidine kinase, homodimeric domain AhyD4_RS17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS17645 PF01584 CheW-like domain AhyD4_RS17650 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS17650 PF00672 HAMP domain AhyD4_RS17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS17655 PF01584 CheW-like domain AhyD4_RS17660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS17660 PF00672 HAMP domain AhyD4_RS17660 PF02203 Tar ligand binding domain homologue AhyD4_RS17665 PF01739 CheR methyltransferase, SAM binding domain AhyD4_RS17665 PF03705 CheR methyltransferase, all-alpha domain AhyD4_RS17670 PF03975 CheD chemotactic sensory transduction AhyD4_RS17675 PF00072 Response regulator receiver domain AhyD4_RS17675 PF01339 CheB methylesterase AhyD4_RS17680 PF00266 Aminotransferase class-V AhyD4_RS17710 PF01590 GAF domain AhyD4_RS17710 PF00563 EAL domain AhyD4_RS17710 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS17710 PF00989 PAS fold AhyD4_RS17715 PF16325 Peptidase family U32 C-terminal domain AhyD4_RS17715 PF01136 Peptidase family U32 AhyD4_RS17720 PF12838 4Fe-4S dicluster domain AhyD4_RS17725 PF01168 Alanine racemase, N-terminal domain AhyD4_RS17725 PF00842 Alanine racemase, C-terminal domain AhyD4_RS17730 PF00772 DnaB-like helicase N terminal domain AhyD4_RS17730 PF03796 DnaB-like helicase C terminal domain AhyD4_RS17740 PF12792 CSS motif domain associated with EAL AhyD4_RS17740 PF00563 EAL domain AhyD4_RS17745 PF00149 Calcineurin-like phosphoesterase AhyD4_RS17745 PF02872 5'-nucleotidase, C-terminal domain AhyD4_RS17765 PF00158 Sigma-54 interaction domain AhyD4_RS17765 PF00072 Response regulator receiver domain AhyD4_RS17765 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS17770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AhyD4_RS17770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS17780 PF04102 SlyX AhyD4_RS17785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS17790 PF09526 Probable metal-binding protein (DUF2387) AhyD4_RS17800 PF00072 Response regulator receiver domain AhyD4_RS17800 PF01584 CheW-like domain AhyD4_RS17805 PF00561 alpha/beta hydrolase fold AhyD4_RS17810 PF00360 Phytochrome region AhyD4_RS17810 PF00563 EAL domain AhyD4_RS17810 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS17810 PF01590 GAF domain AhyD4_RS17815 PF06794 Uncharacterised protein family (UPF0270) AhyD4_RS17820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AhyD4_RS17820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AhyD4_RS17820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AhyD4_RS17825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AhyD4_RS17830 PF00535 Glycosyl transferase family 2 AhyD4_RS17835 PF02911 Formyl transferase, C-terminal domain AhyD4_RS17835 PF00551 Formyl transferase AhyD4_RS17835 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS17840 PF01522 Polysaccharide deacetylase AhyD4_RS17845 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AhyD4_RS17850 PF00892 EamA-like transporter family AhyD4_RS17855 PF00893 Small Multidrug Resistance protein AhyD4_RS17860 PF00485 Phosphoribulokinase / Uridine kinase family AhyD4_RS17875 PF02566 OsmC-like protein AhyD4_RS17880 PF00027 Cyclic nucleotide-binding domain AhyD4_RS17880 PF13545 Crp-like helix-turn-helix domain AhyD4_RS17885 PF13847 Methyltransferase domain AhyD4_RS17890 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AhyD4_RS17890 PF18416 N-acetylglucosamine binding protein domain 2 AhyD4_RS17895 PF17945 Beta/Gamma crystallin AhyD4_RS17895 PF12561 ToxR activated gene A lipoprotein domain AhyD4_RS17900 PF08329 Chitinase A, N-terminal domain AhyD4_RS17900 PF00704 Glycosyl hydrolases family 18 AhyD4_RS17905 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS17905 PF00989 PAS fold AhyD4_RS17915 PF13443 Cro/C1-type HTH DNA-binding domain AhyD4_RS17920 PF12832 MFS_1 like family AhyD4_RS17925 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS17925 PF00593 TonB dependent receptor AhyD4_RS17945 PF01243 Pyridoxamine 5'-phosphate oxidase AhyD4_RS17950 PF06228 Haem utilisation ChuX/HutX AhyD4_RS17960 PF01032 FecCD transport family AhyD4_RS17965 PF00005 ABC transporter AhyD4_RS17975 PF01370 NAD dependent epimerase/dehydratase family AhyD4_RS17985 PF01791 DeoC/LacD family aldolase AhyD4_RS17990 PF07662 Na+ dependent nucleoside transporter C-terminus AhyD4_RS17990 PF07670 Nucleoside recognition AhyD4_RS17990 PF01773 Na+ dependent nucleoside transporter N-terminus AhyD4_RS17995 PF01048 Phosphorylase superfamily AhyD4_RS18000 PF03466 LysR substrate binding domain AhyD4_RS18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS18015 PF01464 Transglycosylase SLT domain AhyD4_RS18020 PF01048 Phosphorylase superfamily AhyD4_RS18115 PF01343 Peptidase family S49 AhyD4_RS18130 PF03354 Phage Terminase AhyD4_RS18180 PF00004 ATPase family associated with various cellular activities (AAA) AhyD4_RS18185 PF01555 DNA methylase AhyD4_RS18265 PF00717 Peptidase S24-like AhyD4_RS18265 PF01381 Helix-turn-helix AhyD4_RS18305 PF00589 Phage integrase family AhyD4_RS18305 PF12167 Arm DNA-binding domain AhyD4_RS18310 PF12848 ABC transporter AhyD4_RS18310 PF00005 ABC transporter AhyD4_RS18320 PF00860 Permease family AhyD4_RS18325 PF05099 Tellurite resistance protein TerB AhyD4_RS18325 PF00226 DnaJ domain AhyD4_RS18330 PF00483 Nucleotidyl transferase AhyD4_RS18335 PF01636 Phosphotransferase enzyme family AhyD4_RS18340 PF03968 OstA-like protein AhyD4_RS18340 PF04453 LPS transport system D AhyD4_RS18345 PF00639 PPIC-type PPIASE domain AhyD4_RS18345 PF09312 SurA N-terminal domain AhyD4_RS18350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AhyD4_RS18355 PF00398 Ribosomal RNA adenine dimethylase AhyD4_RS18360 PF04379 ApaG domain AhyD4_RS18365 PF00149 Calcineurin-like phosphoesterase AhyD4_RS18375 PF00296 Luciferase-like monooxygenase AhyD4_RS18395 PF00501 AMP-binding enzyme AhyD4_RS18395 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS18400 PF07670 Nucleoside recognition AhyD4_RS18405 PF01018 GTP1/OBG AhyD4_RS18405 PF01926 50S ribosome-binding GTPase AhyD4_RS18410 PF01016 Ribosomal L27 protein AhyD4_RS18420 PF00348 Polyprenyl synthetase AhyD4_RS18425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AhyD4_RS18430 PF01145 SPFH domain / Band 7 family AhyD4_RS18435 PF01145 SPFH domain / Band 7 family AhyD4_RS18435 PF12221 Bacterial membrane protein N terminal AhyD4_RS18440 PF01926 50S ribosome-binding GTPase AhyD4_RS18440 PF13167 GTP-binding GTPase N-terminal AhyD4_RS18440 PF16360 GTP-binding GTPase Middle Region AhyD4_RS18445 PF17209 Hfq protein AhyD4_RS18455 PF01119 DNA mismatch repair protein, C-terminal domain AhyD4_RS18455 PF08676 MutL C terminal dimerisation domain AhyD4_RS18460 PF01520 N-acetylmuramoyl-L-alanine amidase AhyD4_RS18465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AhyD4_RS18470 PF01256 Carbohydrate kinase AhyD4_RS18470 PF03853 YjeF-related protein N-terminus AhyD4_RS18475 PF08331 Domain of unknown function (DUF1730) AhyD4_RS18480 PF00480 ROK family AhyD4_RS18495 PF09383 NIL domain AhyD4_RS18495 PF00005 ABC transporter AhyD4_RS18500 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS18505 PF03180 NLPA lipoprotein AhyD4_RS18510 PF02357 Transcription termination factor nusG AhyD4_RS18515 PF00672 HAMP domain AhyD4_RS18515 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS18515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS18520 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS18520 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS18520 PF00563 EAL domain AhyD4_RS18525 PF09456 RcsC Alpha-Beta-Loop (ABL) AhyD4_RS18525 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS18525 PF00072 Response regulator receiver domain AhyD4_RS18535 PF13286 Phosphohydrolase-associated domain AhyD4_RS18535 PF01966 HD domain AhyD4_RS18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS18540 PF18415 Histidine kinase receptor ArcB trans-membrane domain AhyD4_RS18540 PF01627 Hpt domain AhyD4_RS18540 PF00989 PAS fold AhyD4_RS18540 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS18540 PF00072 Response regulator receiver domain AhyD4_RS18560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AhyD4_RS18565 PF03466 LysR substrate binding domain AhyD4_RS18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS18575 PF01259 SAICAR synthetase AhyD4_RS18580 PF06804 NlpB/DapX lipoprotein AhyD4_RS18585 PF00701 Dihydrodipicolinate synthetase family AhyD4_RS18590 PF01842 ACT domain AhyD4_RS18595 PF00578 AhpC/TSA family AhyD4_RS18600 PF03887 YfbU domain AhyD4_RS18605 PF04217 Protein of unknown function, DUF412 AhyD4_RS18610 PF00871 Acetokinase family AhyD4_RS18615 PF07085 DRTGG domain AhyD4_RS18615 PF01515 Phosphate acetyl/butaryl transferase AhyD4_RS18620 PF10369 Small subunit of acetolactate synthase AhyD4_RS18625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS18625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhyD4_RS18625 PF00205 Thiamine pyrophosphate enzyme, central domain AhyD4_RS18635 PF01569 PAP2 superfamily AhyD4_RS18645 PF00682 HMGL-like AhyD4_RS18645 PF08502 LeuA allosteric (dimerisation) domain AhyD4_RS18650 PF00180 Isocitrate/isopropylmalate dehydrogenase AhyD4_RS18655 PF00330 Aconitase family (aconitate hydratase) AhyD4_RS18660 PF00694 Aconitase C-terminal domain AhyD4_RS18680 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS18685 PF00005 ABC transporter AhyD4_RS18690 PF02562 PhoH-like protein AhyD4_RS18690 PF13638 PIN domain AhyD4_RS18700 PF00317 Ribonucleotide reductase, all-alpha domain AhyD4_RS18700 PF02867 Ribonucleotide reductase, barrel domain AhyD4_RS18700 PF08343 Ribonucleotide reductase N-terminal AhyD4_RS18730 PF18337 RapA N-terminal Tudor like domain AhyD4_RS18730 PF00271 Helicase conserved C-terminal domain AhyD4_RS18730 PF12137 RNA polymerase recycling family C-terminal AhyD4_RS18730 PF18339 RapA N-terminal Tudor like domain 1 AhyD4_RS18730 PF00176 SNF2 family N-terminal domain AhyD4_RS18735 PF00849 RNA pseudouridylate synthase AhyD4_RS18745 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS18745 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS18745 PF00563 EAL domain AhyD4_RS18745 PF13188 PAS domain AhyD4_RS18755 PF00118 TCP-1/cpn60 chaperonin family AhyD4_RS18760 PF00166 Chaperonin 10 Kd subunit AhyD4_RS18765 PF01554 MatE AhyD4_RS18770 PF04186 FxsA cytoplasmic membrane protein AhyD4_RS18775 PF10415 Fumarase C C-terminus AhyD4_RS18775 PF00206 Lyase AhyD4_RS18780 PF03605 Anaerobic c4-dicarboxylate membrane transporter AhyD4_RS18785 PF00267 Gram-negative porin AhyD4_RS18790 PF07690 Major Facilitator Superfamily AhyD4_RS18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS18795 PF03466 LysR substrate binding domain AhyD4_RS18800 PF04151 Bacterial pre-peptidase C-terminal domain AhyD4_RS18800 PF02868 Thermolysin metallopeptidase, alpha-helical domain AhyD4_RS18800 PF01447 Thermolysin metallopeptidase, catalytic domain AhyD4_RS18800 PF03413 Peptidase propeptide and YPEB domain AhyD4_RS18800 PF07504 Fungalysin/Thermolysin Propeptide Motif AhyD4_RS18810 PF13302 Acetyltransferase (GNAT) domain AhyD4_RS18820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AhyD4_RS18820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhyD4_RS18825 PF07690 Major Facilitator Superfamily AhyD4_RS18830 PF01725 Ham1 family AhyD4_RS18835 PF04055 Radical SAM superfamily AhyD4_RS18835 PF06969 HemN C-terminal domain AhyD4_RS18840 PF03889 Alternative ribosome-rescue factor A AhyD4_RS18845 PF01872 RibD C-terminal domain AhyD4_RS18850 PF13411 MerR HTH family regulatory protein AhyD4_RS18855 PF02142 MGS-like domain AhyD4_RS18855 PF01808 AICARFT/IMPCHase bienzyme AhyD4_RS18860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AhyD4_RS18860 PF02843 Phosphoribosylglycinamide synthetase, C domain AhyD4_RS18860 PF02844 Phosphoribosylglycinamide synthetase, N domain AhyD4_RS18875 PF00128 Alpha amylase, catalytic domain AhyD4_RS18890 PF04546 Sigma-70, non-essential region AhyD4_RS18890 PF03979 Sigma-70 factor, region 1.1 AhyD4_RS18890 PF00140 Sigma-70 factor, region 1.2 AhyD4_RS18890 PF04545 Sigma-70, region 4 AhyD4_RS18890 PF04539 Sigma-70 region 3 AhyD4_RS18890 PF04542 Sigma-70 region 2 AhyD4_RS18895 PF10410 DnaB-helicase binding domain of primase AhyD4_RS18895 PF08278 DNA primase DnaG DnaB-binding AhyD4_RS18895 PF08275 DNA primase catalytic core, N-terminal domain AhyD4_RS18895 PF01807 CHC2 zinc finger AhyD4_RS18900 PF09424 Yqey-like protein AhyD4_RS18905 PF00814 Glycoprotease family AhyD4_RS18910 PF00140 Sigma-70 factor, region 1.2 AhyD4_RS18910 PF04539 Sigma-70 region 3 AhyD4_RS18910 PF04545 Sigma-70, region 4 AhyD4_RS18910 PF04542 Sigma-70 region 2 AhyD4_RS18915 PF01551 Peptidase family M23 AhyD4_RS18915 PF01476 LysM domain AhyD4_RS18920 PF09335 SNARE associated Golgi protein AhyD4_RS18930 PF01975 Survival protein SurE AhyD4_RS18935 PF01142 tRNA pseudouridine synthase D (TruD) AhyD4_RS18940 PF02542 YgbB family AhyD4_RS18945 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AhyD4_RS18950 PF04977 Septum formation initiator AhyD4_RS18955 PF00113 Enolase, C-terminal TIM barrel domain AhyD4_RS18955 PF03952 Enolase, N-terminal domain AhyD4_RS18960 PF00117 Glutamine amidotransferase class-I AhyD4_RS18960 PF06418 CTP synthase N-terminus AhyD4_RS18965 PF03819 MazG nucleotide pyrophosphohydrolase domain AhyD4_RS18970 PF02824 TGS domain AhyD4_RS18970 PF04607 Region found in RelA / SpoT proteins AhyD4_RS18970 PF13291 ACT domain AhyD4_RS18975 PF05958 tRNA (Uracil-5-)-methyltransferase AhyD4_RS18975 PF01938 TRAM domain AhyD4_RS18980 PF00672 HAMP domain AhyD4_RS18980 PF01627 Hpt domain AhyD4_RS18980 PF00072 Response regulator receiver domain AhyD4_RS18980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhyD4_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS18980 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS18985 PF07308 Protein of unknown function (DUF1456) AhyD4_RS18990 PF01510 N-acetylmuramoyl-L-alanine amidase AhyD4_RS18995 PF08220 DeoR-like helix-turn-helix domain AhyD4_RS18995 PF00455 DeoR C terminal sensor domain AhyD4_RS19000 PF08013 Tagatose 6 phosphate kinase AhyD4_RS19005 PF01380 SIS domain AhyD4_RS19010 PF03830 PTS system sorbose subfamily IIB component AhyD4_RS19015 PF03609 PTS system sorbose-specific iic component AhyD4_RS19020 PF03613 PTS system mannose/fructose/sorbose family IID component AhyD4_RS19025 PF03610 PTS system fructose IIA component AhyD4_RS19030 PF01979 Amidohydrolase family AhyD4_RS19035 PF01116 Fructose-bisphosphate aldolase class-II AhyD4_RS19045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AhyD4_RS19050 PF02565 Recombination protein O C terminal AhyD4_RS19050 PF11967 Recombination protein O N terminal AhyD4_RS19055 PF07650 KH domain AhyD4_RS19055 PF01926 50S ribosome-binding GTPase AhyD4_RS19060 PF00035 Double-stranded RNA binding motif AhyD4_RS19060 PF14622 Ribonuclease-III-like AhyD4_RS19065 PF10502 Signal peptidase, peptidase S26 AhyD4_RS19070 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS19070 PF00679 Elongation factor G C-terminus AhyD4_RS19070 PF06421 GTP-binding protein LepA C-terminus AhyD4_RS19070 PF03144 Elongation factor Tu domain 2 AhyD4_RS19080 PF03888 MucB/RseB N-terminal domain AhyD4_RS19080 PF17188 MucB/RseB C-terminal domain AhyD4_RS19085 PF03872 Anti sigma-E protein RseA, N-terminal domain AhyD4_RS19085 PF03873 Anti sigma-E protein RseA, C-terminal domain AhyD4_RS19090 PF08281 Sigma-70, region 4 AhyD4_RS19090 PF04542 Sigma-70 region 2 AhyD4_RS19095 PF00890 FAD binding domain AhyD4_RS19095 PF02910 Fumarate reductase flavoprotein C-term AhyD4_RS19105 PF03937 Flavinator of succinate dehydrogenase AhyD4_RS19110 PF01571 Aminomethyltransferase folate-binding domain AhyD4_RS19115 PF03466 LysR substrate binding domain AhyD4_RS19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19130 PF03091 CutA1 divalent ion tolerance protein AhyD4_RS19135 PF02683 Cytochrome C biogenesis protein transmembrane region AhyD4_RS19135 PF11412 Disulphide bond corrector protein DsbC AhyD4_RS19145 PF01266 FAD dependent oxidoreductase AhyD4_RS19150 PF01116 Fructose-bisphosphate aldolase class-II AhyD4_RS19155 PF00162 Phosphoglycerate kinase AhyD4_RS19160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AhyD4_RS19160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhyD4_RS19165 PF00480 ROK family AhyD4_RS19170 PF01208 Uroporphyrinogen decarboxylase (URO-D) AhyD4_RS19175 PF00293 NUDIX domain AhyD4_RS19175 PF09297 NADH pyrophosphatase zinc ribbon domain AhyD4_RS19180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AhyD4_RS19180 PF14850 DNA-binding domain of Proline dehydrogenase AhyD4_RS19180 PF01619 Proline dehydrogenase AhyD4_RS19180 PF00171 Aldehyde dehydrogenase family AhyD4_RS19185 PF08239 Bacterial SH3 domain AhyD4_RS19190 PF00027 Cyclic nucleotide-binding domain AhyD4_RS19190 PF00520 Ion transport protein AhyD4_RS19195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS19195 PF00672 HAMP domain AhyD4_RS19195 PF02743 Cache domain AhyD4_RS19205 PF08335 GlnD PII-uridylyltransferase AhyD4_RS19205 PF03710 Glutamate-ammonia ligase adenylyltransferase AhyD4_RS19225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AhyD4_RS19225 PF00326 Prolyl oligopeptidase family AhyD4_RS19230 PF00291 Pyridoxal-phosphate dependent enzyme AhyD4_RS19235 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS19240 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS19245 PF00005 ABC transporter AhyD4_RS19250 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS19255 PF12704 MacB-like periplasmic core domain AhyD4_RS19255 PF02687 FtsX-like permease family AhyD4_RS19255 PF00005 ABC transporter AhyD4_RS19260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS19265 PF00072 Response regulator receiver domain AhyD4_RS19265 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS19270 PF00672 HAMP domain AhyD4_RS19270 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS19270 PF16527 Two-component sensor protein CpxA, periplasmic domain AhyD4_RS19275 PF09297 NADH pyrophosphatase zinc ribbon domain AhyD4_RS19275 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AhyD4_RS19275 PF00293 NUDIX domain AhyD4_RS19310 PF03060 Nitronate monooxygenase AhyD4_RS19320 PF00445 Ribonuclease T2 family AhyD4_RS19335 PF03150 Di-haem cytochrome c peroxidase AhyD4_RS19335 PF00034 Cytochrome c AhyD4_RS19340 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AhyD4_RS19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19355 PF03466 LysR substrate binding domain AhyD4_RS19360 PF00271 Helicase conserved C-terminal domain AhyD4_RS19360 PF00270 DEAD/DEAH box helicase AhyD4_RS19370 PF00753 Metallo-beta-lactamase superfamily AhyD4_RS19375 PF01425 Amidase AhyD4_RS19380 PF04371 Porphyromonas-type peptidyl-arginine deiminase AhyD4_RS19385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19385 PF03466 LysR substrate binding domain AhyD4_RS19395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhyD4_RS19400 PF00583 Acetyltransferase (GNAT) family AhyD4_RS19420 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS19420 PF16658 Class II release factor RF3, C-terminal domain AhyD4_RS19420 PF03144 Elongation factor Tu domain 2 AhyD4_RS19425 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS19425 PF00072 Response regulator receiver domain AhyD4_RS19430 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS19435 PF05762 VWA domain containing CoxE-like protein AhyD4_RS19440 PF17868 AAA lid domain AhyD4_RS19440 PF12592 Protein of unknown function (DUF3763) AhyD4_RS19440 PF07728 AAA domain (dynein-related subfamily) AhyD4_RS19450 PF00583 Acetyltransferase (GNAT) family AhyD4_RS19460 PF00501 AMP-binding enzyme AhyD4_RS19470 PF04262 Glutamate-cysteine ligase AhyD4_RS19475 PF05193 Peptidase M16 inactive domain AhyD4_RS19475 PF00675 Insulinase (Peptidase family M16) AhyD4_RS19480 PF09335 SNARE associated Golgi protein AhyD4_RS19485 PF08240 Alcohol dehydrogenase GroES-like domain AhyD4_RS19485 PF00109 Beta-ketoacyl synthase, N-terminal domain AhyD4_RS19485 PF16197 Ketoacyl-synthetase C-terminal extension AhyD4_RS19485 PF00550 Phosphopantetheine attachment site AhyD4_RS19485 PF02801 Beta-ketoacyl synthase, C-terminal domain AhyD4_RS19485 PF14765 Polyketide synthase dehydratase AhyD4_RS19485 PF08659 KR domain AhyD4_RS19485 PF00698 Acyl transferase domain AhyD4_RS19485 PF08990 Erythronolide synthase docking AhyD4_RS19500 PF00970 Oxidoreductase FAD-binding domain AhyD4_RS19500 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS19505 PF03948 Ribosomal protein L9, C-terminal domain AhyD4_RS19505 PF01281 Ribosomal protein L9, N-terminal domain AhyD4_RS19510 PF01084 Ribosomal protein S18 AhyD4_RS19515 PF01250 Ribosomal protein S6 AhyD4_RS19520 PF01566 Natural resistance-associated macrophage protein AhyD4_RS19540 PF13673 Acetyltransferase (GNAT) domain AhyD4_RS19550 PF08032 RNA 2'-O ribose methyltransferase substrate binding AhyD4_RS19550 PF00588 SpoU rRNA Methylase family AhyD4_RS19555 PF00575 S1 RNA binding domain AhyD4_RS19555 PF08461 Ribonuclease R winged-helix domain AhyD4_RS19555 PF00773 RNB domain AhyD4_RS19555 PF17876 Cold shock domain AhyD4_RS19555 PF08206 Ribonuclease B OB domain AhyD4_RS19560 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS19565 PF02664 S-Ribosylhomocysteinase (LuxS) AhyD4_RS19575 PF00543 Nitrogen regulatory protein P-II AhyD4_RS19580 PF02540 NAD synthase AhyD4_RS19580 PF00795 Carbon-nitrogen hydrolase AhyD4_RS19615 PF05567 Neisseria PilC beta-propeller domain AhyD4_RS19640 PF02401 LytB protein AhyD4_RS19645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhyD4_RS19650 PF01252 Signal peptidase (SPase) II AhyD4_RS19655 PF00133 tRNA synthetases class I (I, L, M and V) AhyD4_RS19655 PF08264 Anticodon-binding domain of tRNA AhyD4_RS19655 PF06827 Zinc finger found in FPG and IleRS AhyD4_RS19660 PF01687 Riboflavin kinase AhyD4_RS19660 PF06574 FAD synthetase AhyD4_RS19665 PF03023 Lipid II flippase MurJ AhyD4_RS19670 PF01649 Ribosomal protein S20 AhyD4_RS19675 PF01022 Bacterial regulatory protein, arsR family AhyD4_RS19680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19680 PF03466 LysR substrate binding domain AhyD4_RS19690 PF06965 Na+/H+ antiporter 1 AhyD4_RS19695 PF00303 Thymidylate synthase AhyD4_RS19700 PF01790 Prolipoprotein diacylglyceryl transferase AhyD4_RS19705 PF00391 PEP-utilising enzyme, mobile domain AhyD4_RS19705 PF05524 PEP-utilising enzyme, N-terminal AhyD4_RS19705 PF01590 GAF domain AhyD4_RS19705 PF02896 PEP-utilising enzyme, TIM barrel domain AhyD4_RS19710 PF00293 NUDIX domain AhyD4_RS19715 PF02976 DNA mismatch repair enzyme MutH AhyD4_RS19725 PF01245 Ribosomal protein L19 AhyD4_RS19730 PF01746 tRNA (Guanine-1)-methyltransferase AhyD4_RS19735 PF05239 PRC-barrel domain AhyD4_RS19735 PF01782 RimM N-terminal domain AhyD4_RS19740 PF00886 Ribosomal protein S16 AhyD4_RS19745 PF02978 Signal peptide binding domain AhyD4_RS19745 PF02881 SRP54-type protein, helical bundle domain AhyD4_RS19745 PF00448 SRP54-type protein, GTPase domain AhyD4_RS19750 PF01578 Cytochrome C assembly protein AhyD4_RS19755 PF03471 Transporter associated domain AhyD4_RS19755 PF01595 Cyclin M transmembrane N-terminal domain AhyD4_RS19755 PF00571 CBS domain AhyD4_RS19760 PF02082 Transcriptional regulator AhyD4_RS19765 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS19765 PF00042 Globin AhyD4_RS19765 PF00970 Oxidoreductase FAD-binding domain AhyD4_RS19770 PF08238 Sel1 repeat AhyD4_RS19775 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AhyD4_RS19775 PF00056 lactate/malate dehydrogenase, NAD binding domain AhyD4_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS19790 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS19795 PF00005 ABC transporter AhyD4_RS19800 PF01316 Arginine repressor, DNA binding domain AhyD4_RS19800 PF02863 Arginine repressor, C-terminal domain AhyD4_RS19805 PF04261 Dyp-type peroxidase family AhyD4_RS19810 PF08402 TOBE domain AhyD4_RS19810 PF00005 ABC transporter AhyD4_RS19820 PF13416 Bacterial extracellular solute-binding protein AhyD4_RS19825 PF00543 Nitrogen regulatory protein P-II AhyD4_RS19830 PF00472 RF-1 domain AhyD4_RS19835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhyD4_RS19835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AhyD4_RS19840 PF07670 Nucleoside recognition AhyD4_RS19840 PF01773 Na+ dependent nucleoside transporter N-terminus AhyD4_RS19840 PF07662 Na+ dependent nucleoside transporter C-terminus AhyD4_RS19845 PF03466 LysR substrate binding domain AhyD4_RS19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19850 PF00255 Glutathione peroxidase AhyD4_RS19860 PF02595 Glycerate kinase family AhyD4_RS19865 PF02447 GntP family permease AhyD4_RS19870 PF13556 PucR C-terminal helix-turn-helix domain AhyD4_RS19870 PF17853 GGDEF-like domain AhyD4_RS19870 PF05651 Putative sugar diacid recognition AhyD4_RS19875 PF06062 Uncharacterised protein family (UPF0231) AhyD4_RS19890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS19890 PF08447 PAS fold AhyD4_RS19895 PF03372 Endonuclease/Exonuclease/phosphatase family AhyD4_RS19910 PF00270 DEAD/DEAH box helicase AhyD4_RS19910 PF00271 Helicase conserved C-terminal domain AhyD4_RS19920 PF08534 Redoxin AhyD4_RS19925 PF00403 Heavy-metal-associated domain AhyD4_RS19930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AhyD4_RS19930 PF17967 Pullulanase N2 domain AhyD4_RS19930 PF11852 Domain of unknown function (DUF3372) AhyD4_RS19930 PF03714 Bacterial pullanase-associated domain AhyD4_RS19930 PF18494 Pullulanase Ins domain AhyD4_RS19945 PF02583 Metal-sensitive transcriptional repressor AhyD4_RS19950 PF00155 Aminotransferase class I and II AhyD4_RS19955 PF03466 LysR substrate binding domain AhyD4_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS19965 PF04055 Radical SAM superfamily AhyD4_RS19970 PF11230 Protein of unknown function (DUF3029) AhyD4_RS19990 PF07676 WD40-like Beta Propeller Repeat AhyD4_RS19990 PF14684 Tricorn protease C1 domain AhyD4_RS19990 PF03572 Peptidase family S41 AhyD4_RS19990 PF14685 Tricorn protease PDZ domain AhyD4_RS20020 PF00672 HAMP domain AhyD4_RS20020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS20020 PF12729 Four helix bundle sensory module for signal transduction AhyD4_RS20025 PF18416 N-acetylglucosamine binding protein domain 2 AhyD4_RS20025 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AhyD4_RS20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS20030 PF03466 LysR substrate binding domain AhyD4_RS20035 PF12857 TOBE-like domain AhyD4_RS20035 PF00005 ABC transporter AhyD4_RS20040 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS20045 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS20060 PF13194 Domain of unknown function (DUF4010) AhyD4_RS20065 PF14602 Hexapeptide repeat of succinyl-transferase AhyD4_RS20065 PF12464 Maltose acetyltransferase AhyD4_RS20090 PF00206 Lyase AhyD4_RS20090 PF14698 Argininosuccinate lyase C-terminal AhyD4_RS20095 PF00764 Arginosuccinate synthase AhyD4_RS20100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhyD4_RS20100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhyD4_RS20105 PF00696 Amino acid kinase family AhyD4_RS20110 PF01118 Semialdehyde dehydrogenase, NAD binding domain AhyD4_RS20110 PF02774 Semialdehyde dehydrogenase, dimerisation domain AhyD4_RS20115 PF07687 Peptidase dimerisation domain AhyD4_RS20115 PF01546 Peptidase family M20/M25/M40 AhyD4_RS20120 PF00311 Phosphoenolpyruvate carboxylase AhyD4_RS20130 PF00696 Amino acid kinase family AhyD4_RS20130 PF03447 Homoserine dehydrogenase, NAD binding domain AhyD4_RS20130 PF00742 Homoserine dehydrogenase AhyD4_RS20135 PF01053 Cys/Met metabolism PLP-dependent enzyme AhyD4_RS20140 PF01340 Met Apo-repressor, MetJ AhyD4_RS20145 PF12833 Helix-turn-helix domain AhyD4_RS20145 PF06445 GyrI-like small molecule binding domain AhyD4_RS20150 PF01588 Putative tRNA binding domain AhyD4_RS20155 PF03222 Tryptophan/tyrosine permease family AhyD4_RS20160 PF00459 Inositol monophosphatase family AhyD4_RS20165 PF00293 NUDIX domain AhyD4_RS20170 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS20175 PF00579 tRNA synthetases class I (W and Y) AhyD4_RS20175 PF01479 S4 domain AhyD4_RS20180 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS20185 PF01203 Type II secretion system (T2SS), protein N AhyD4_RS20190 PF04612 Type II secretion system (T2SS), protein M AhyD4_RS20195 PF05134 Type II secretion system (T2SS), protein L AhyD4_RS20195 PF12693 GspL periplasmic domain AhyD4_RS20200 PF03934 Type II secretion system (T2SS), protein K AhyD4_RS20205 PF11612 Type II secretion system (T2SS), protein J AhyD4_RS20205 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS20210 PF02501 Type II secretion system (T2SS), protein I AhyD4_RS20210 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS20215 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS20215 PF12019 Type II transport protein GspH AhyD4_RS20220 PF08334 Type II secretion system (T2SS), protein G AhyD4_RS20220 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS20225 PF00482 Type II secretion system (T2SS), protein F AhyD4_RS20230 PF00437 Type II/IV secretion system protein AhyD4_RS20235 PF03958 Bacterial type II/III secretion system short domain AhyD4_RS20235 PF00263 Bacterial type II and III secretion system protein AhyD4_RS20240 PF11356 Type II secretion system protein C AhyD4_RS20245 PF01479 S4 domain AhyD4_RS20250 PF01430 Hsp33 protein AhyD4_RS20255 PF01293 Phosphoenolpyruvate carboxykinase AhyD4_RS20260 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS20265 PF01321 Creatinase/Prolidase N-terminal domain AhyD4_RS20265 PF00557 Metallopeptidase family M24 AhyD4_RS20270 PF11756 Nitrous oxide-stimulated promoter AhyD4_RS20275 PF00583 Acetyltransferase (GNAT) family AhyD4_RS20280 PF05433 Glycine zipper 2TM domain AhyD4_RS20285 PF00149 Calcineurin-like phosphoesterase AhyD4_RS20285 PF02872 5'-nucleotidase, C-terminal domain AhyD4_RS20290 PF01810 LysE type translocator AhyD4_RS20295 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS20295 PF03472 Autoinducer binding domain AhyD4_RS20300 PF00765 Autoinducer synthase AhyD4_RS20305 PF03466 LysR substrate binding domain AhyD4_RS20305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS20310 PF00773 RNB domain AhyD4_RS20310 PF08206 Ribonuclease B OB domain AhyD4_RS20310 PF17876 Cold shock domain AhyD4_RS20315 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS20325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AhyD4_RS20325 PF02378 Phosphotransferase system, EIIC AhyD4_RS20325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS20330 PF08125 Mannitol dehydrogenase C-terminal domain AhyD4_RS20330 PF01232 Mannitol dehydrogenase Rossmann domain AhyD4_RS20335 PF05068 Mannitol repressor AhyD4_RS20340 PF02080 TrkA-C domain AhyD4_RS20340 PF03471 Transporter associated domain AhyD4_RS20340 PF00999 Sodium/hydrogen exchanger family AhyD4_RS20360 PF01544 CorA-like Mg2+ transporter protein AhyD4_RS20365 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AhyD4_RS20380 PF04307 LexA-binding, inner membrane-associated putative hydrolase AhyD4_RS20385 PF01773 Na+ dependent nucleoside transporter N-terminus AhyD4_RS20385 PF07662 Na+ dependent nucleoside transporter C-terminus AhyD4_RS20385 PF07670 Nucleoside recognition AhyD4_RS20390 PF03880 DbpA RNA binding domain AhyD4_RS20390 PF00270 DEAD/DEAH box helicase AhyD4_RS20390 PF00271 Helicase conserved C-terminal domain AhyD4_RS20415 PF01040 UbiA prenyltransferase family AhyD4_RS20420 PF00425 chorismate binding enzyme AhyD4_RS20425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhyD4_RS20425 PF16582 Middle domain of thiamine pyrophosphate AhyD4_RS20425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhyD4_RS20430 PF12697 Alpha/beta hydrolase family AhyD4_RS20435 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS20440 PF13378 Enolase C-terminal domain-like AhyD4_RS20445 PF00501 AMP-binding enzyme AhyD4_RS20455 PF00419 Fimbrial protein AhyD4_RS20460 PF00419 Fimbrial protein AhyD4_RS20465 PF02753 Pili assembly chaperone PapD, C-terminal domain AhyD4_RS20465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AhyD4_RS20470 PF13954 PapC N-terminal domain AhyD4_RS20470 PF13953 PapC C-terminal domain AhyD4_RS20470 PF00577 Outer membrane usher protein AhyD4_RS20480 PF00419 Fimbrial protein AhyD4_RS20490 PF01752 Collagenase AhyD4_RS20490 PF08453 Peptidase family M9 N-terminal AhyD4_RS20495 PF02698 DUF218 domain AhyD4_RS20500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AhyD4_RS20500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AhyD4_RS20510 PF00561 alpha/beta hydrolase fold AhyD4_RS20515 PF03280 Proteobacterial lipase chaperone protein AhyD4_RS20530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhyD4_RS20530 PF12793 Sugar transport-related sRNA regulator N-term AhyD4_RS20535 PF01053 Cys/Met metabolism PLP-dependent enzyme AhyD4_RS20545 PF00465 Iron-containing alcohol dehydrogenase AhyD4_RS20560 PF03577 Peptidase family C69 AhyD4_RS20565 PF00106 short chain dehydrogenase AhyD4_RS20585 PF02308 MgtC family AhyD4_RS20590 PF02903 Alpha amylase, N-terminal ig-like domain AhyD4_RS20590 PF16657 Maltogenic Amylase, C-terminal domain AhyD4_RS20590 PF00128 Alpha amylase, catalytic domain AhyD4_RS20605 PF00884 Sulfatase AhyD4_RS20610 PF01037 Lrp/AsnC ligand binding domain AhyD4_RS20620 PF04204 Homoserine O-succinyltransferase AhyD4_RS20625 PF01966 HD domain AhyD4_RS20625 PF12072 Domain of unknown function (DUF3552) AhyD4_RS20625 PF00013 KH domain AhyD4_RS20630 PF02464 Competence-damaged protein AhyD4_RS20630 PF00994 Probable molybdopterin binding domain AhyD4_RS20645 PF00005 ABC transporter AhyD4_RS20665 PF07722 Peptidase C26 AhyD4_RS20675 PF00027 Cyclic nucleotide-binding domain AhyD4_RS20675 PF13545 Crp-like helix-turn-helix domain AhyD4_RS20685 PF13419 Haloacid dehalogenase-like hydrolase AhyD4_RS20690 PF00589 Phage integrase family AhyD4_RS20690 PF02899 Phage integrase, N-terminal SAM-like domain AhyD4_RS20700 PF01678 Diaminopimelate epimerase AhyD4_RS20705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AhyD4_RS20705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AhyD4_RS20710 PF01491 Frataxin-like domain AhyD4_RS20715 PF02230 Phospholipase/Carboxylesterase AhyD4_RS20720 PF01295 Adenylate cyclase, class-I AhyD4_RS20720 PF12633 Adenylate cyclase NT domain AhyD4_RS20725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AhyD4_RS20725 PF03900 Porphobilinogen deaminase, C-terminal domain AhyD4_RS20730 PF02602 Uroporphyrinogen-III synthase HemD AhyD4_RS20735 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AhyD4_RS20745 PF03692 Putative zinc- or iron-chelating domain AhyD4_RS20750 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AhyD4_RS20765 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS20765 PF00593 TonB dependent receptor AhyD4_RS20790 PF01638 HxlR-like helix-turn-helix AhyD4_RS20795 PF08803 Putative mono-oxygenase ydhR AhyD4_RS20810 PF06055 Exopolysaccharide synthesis, ExoD AhyD4_RS20820 PF17151 Periplasmic sensor domain AhyD4_RS20820 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS20835 PF13036 Peptidoglycan-synthase activator LpoB AhyD4_RS20845 PF04055 Radical SAM superfamily AhyD4_RS20845 PF06968 Biotin and Thiamin Synthesis associated domain AhyD4_RS20850 PF05690 Thiazole biosynthesis protein ThiG AhyD4_RS20860 PF00899 ThiF family AhyD4_RS20865 PF02581 Thiamine monophosphate synthase AhyD4_RS20870 PF13667 ThiC-associated domain AhyD4_RS20870 PF01964 Radical SAM ThiC family AhyD4_RS20875 PF01117 Aerolysin toxin AhyD4_RS20875 PF03440 Aerolysin/Pertussis toxin (APT) domain AhyD4_RS20890 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS20890 PF00072 Response regulator receiver domain AhyD4_RS20895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS20900 PF05525 Branched-chain amino acid transport protein AhyD4_RS20905 PF08443 RimK-like ATP-grasp domain AhyD4_RS20905 PF18030 RimK PreATP-grasp domain AhyD4_RS20910 PF02574 Homocysteine S-methyltransferase AhyD4_RS20910 PF00809 Pterin binding enzyme AhyD4_RS20910 PF02965 Vitamin B12 dependent methionine synthase, activation domain AhyD4_RS20910 PF02607 B12 binding domain AhyD4_RS20910 PF02310 B12 binding domain AhyD4_RS20915 PF00999 Sodium/hydrogen exchanger family AhyD4_RS20945 PF04320 Protein with unknown function (DUF469) AhyD4_RS20950 PF00419 Fimbrial protein AhyD4_RS20955 PF00691 OmpA family AhyD4_RS20955 PF01389 OmpA-like transmembrane domain AhyD4_RS20960 PF13953 PapC C-terminal domain AhyD4_RS20960 PF00577 Outer membrane usher protein AhyD4_RS20960 PF13954 PapC N-terminal domain AhyD4_RS20965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AhyD4_RS20965 PF02753 Pili assembly chaperone PapD, C-terminal domain AhyD4_RS20985 PF00419 Fimbrial protein AhyD4_RS21010 PF08668 HDOD domain AhyD4_RS21020 PF04228 Putative neutral zinc metallopeptidase AhyD4_RS21025 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AhyD4_RS21040 PF13426 PAS domain AhyD4_RS21040 PF08447 PAS fold AhyD4_RS21040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhyD4_RS21045 PF08678 Rsbr N terminal AhyD4_RS21045 PF01740 STAS domain AhyD4_RS21050 PF13581 Histidine kinase-like ATPase domain AhyD4_RS21055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhyD4_RS21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS21055 PF00672 HAMP domain AhyD4_RS21055 PF00072 Response regulator receiver domain AhyD4_RS21055 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS21055 PF01627 Hpt domain AhyD4_RS21060 PF00072 Response regulator receiver domain AhyD4_RS21070 PF07690 Major Facilitator Superfamily AhyD4_RS21075 PF01914 MarC family integral membrane protein AhyD4_RS21085 PF13580 SIS domain AhyD4_RS21090 PF00367 phosphotransferase system, EIIB AhyD4_RS21090 PF02378 Phosphotransferase system, EIIC AhyD4_RS21105 PF01380 SIS domain AhyD4_RS21105 PF01418 Helix-turn-helix domain, rpiR family AhyD4_RS21110 PF01523 Putative modulator of DNA gyrase AhyD4_RS21115 PF00795 Carbon-nitrogen hydrolase AhyD4_RS21125 PF13502 AsmA-like C-terminal region AhyD4_RS21125 PF13116 Protein of unknown function AhyD4_RS21130 PF10150 Ribonuclease E/G family AhyD4_RS21130 PF00575 S1 RNA binding domain AhyD4_RS21135 PF02545 Maf-like protein AhyD4_RS21140 PF04093 rod shape-determining protein MreD AhyD4_RS21145 PF04085 rod shape-determining protein MreC AhyD4_RS21175 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS21175 PF14245 Type IV pilin PilA AhyD4_RS21180 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS21180 PF00114 Pilin (bacterial filament) AhyD4_RS21185 PF07963 Prokaryotic N-terminal methylation motif AhyD4_RS21195 PF00482 Type II secretion system (T2SS), protein F AhyD4_RS21200 PF00437 Type II/IV secretion system protein AhyD4_RS21200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AhyD4_RS21210 PF09077 Mu B transposition protein, C terminal AhyD4_RS21210 PF13401 AAA domain AhyD4_RS21215 PF00263 Bacterial type II and III secretion system protein AhyD4_RS21215 PF03958 Bacterial type II/III secretion system short domain AhyD4_RS21245 PF17157 Gammaproteobacterial periplasmic sensor domain AhyD4_RS21245 PF00563 EAL domain AhyD4_RS21245 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS21250 PF12792 CSS motif domain associated with EAL AhyD4_RS21250 PF00563 EAL domain AhyD4_RS21255 PF01699 Sodium/calcium exchanger protein AhyD4_RS21260 PF00221 Aromatic amino acid lyase AhyD4_RS21265 PF01175 Urocanase Rossmann-like domain AhyD4_RS21265 PF17392 Urocanase C-terminal domain AhyD4_RS21265 PF17391 Urocanase N-terminal domain AhyD4_RS21270 PF00491 Arginase family AhyD4_RS21275 PF01979 Amidohydrolase family AhyD4_RS21280 PF07702 UTRA domain AhyD4_RS21280 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS21285 PF00484 Carbonic anhydrase AhyD4_RS21290 PF04542 Sigma-70 region 2 AhyD4_RS21290 PF00140 Sigma-70 factor, region 1.2 AhyD4_RS21290 PF04545 Sigma-70, region 4 AhyD4_RS21295 PF18075 FtsX extracellular domain AhyD4_RS21300 PF00005 ABC transporter AhyD4_RS21305 PF00448 SRP54-type protein, GTPase domain AhyD4_RS21305 PF02881 SRP54-type protein, helical bundle domain AhyD4_RS21325 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS21335 PF13091 PLD-like domain AhyD4_RS21340 PF01464 Transglycosylase SLT domain AhyD4_RS21350 PF02416 mttA/Hcf106 family AhyD4_RS21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS21355 PF03466 LysR substrate binding domain AhyD4_RS21360 PF01914 MarC family integral membrane protein AhyD4_RS21365 PF10678 Protein of unknown function (DUF2492) AhyD4_RS21370 PF00375 Sodium:dicarboxylate symporter family AhyD4_RS21380 PF03466 LysR substrate binding domain AhyD4_RS21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS21385 PF13533 Biotin-lipoyl like AhyD4_RS21390 PF07690 Major Facilitator Superfamily AhyD4_RS21395 PF07947 YhhN family AhyD4_RS21410 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AhyD4_RS21410 PF00326 Prolyl oligopeptidase family AhyD4_RS21425 PF00106 short chain dehydrogenase AhyD4_RS21430 PF03466 LysR substrate binding domain AhyD4_RS21430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS21435 PF02525 Flavodoxin-like fold AhyD4_RS21440 PF02254 TrkA-N domain AhyD4_RS21440 PF00999 Sodium/hydrogen exchanger family AhyD4_RS21480 PF01196 Ribosomal protein L17 AhyD4_RS21485 PF01000 RNA polymerase Rpb3/RpoA insert domain AhyD4_RS21485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AhyD4_RS21485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AhyD4_RS21490 PF00163 Ribosomal protein S4/S9 N-terminal domain AhyD4_RS21490 PF01479 S4 domain AhyD4_RS21495 PF00411 Ribosomal protein S11 AhyD4_RS21500 PF00416 Ribosomal protein S13/S18 AhyD4_RS21505 PF00344 SecY translocase AhyD4_RS21510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AhyD4_RS21515 PF03719 Ribosomal protein S5, C-terminal domain AhyD4_RS21515 PF00333 Ribosomal protein S5, N-terminal domain AhyD4_RS21520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AhyD4_RS21525 PF00347 Ribosomal protein L6 AhyD4_RS21530 PF00410 Ribosomal protein S8 AhyD4_RS21535 PF00253 Ribosomal protein S14p/S29e AhyD4_RS21540 PF00281 Ribosomal protein L5 AhyD4_RS21540 PF00673 ribosomal L5P family C-terminus AhyD4_RS21545 PF00467 KOW motif AhyD4_RS21545 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AhyD4_RS21550 PF00238 Ribosomal protein L14p/L23e AhyD4_RS21555 PF00366 Ribosomal protein S17 AhyD4_RS21560 PF00831 Ribosomal L29 protein AhyD4_RS21565 PF00252 Ribosomal protein L16p/L10e AhyD4_RS21570 PF07650 KH domain AhyD4_RS21570 PF00189 Ribosomal protein S3, C-terminal domain AhyD4_RS21575 PF00237 Ribosomal protein L22p/L17e AhyD4_RS21580 PF00203 Ribosomal protein S19 AhyD4_RS21585 PF03947 Ribosomal Proteins L2, C-terminal domain AhyD4_RS21585 PF00181 Ribosomal Proteins L2, RNA binding domain AhyD4_RS21590 PF00276 Ribosomal protein L23 AhyD4_RS21595 PF00573 Ribosomal protein L4/L1 family AhyD4_RS21600 PF00297 Ribosomal protein L3 AhyD4_RS21605 PF00338 Ribosomal protein S10p/S20e AhyD4_RS21615 PF00672 HAMP domain AhyD4_RS21615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS21615 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS21620 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS21620 PF00072 Response regulator receiver domain AhyD4_RS21625 PF03449 Transcription elongation factor, N-terminal AhyD4_RS21625 PF01272 Transcription elongation factor, GreA/GreB, C-term AhyD4_RS21630 PF17674 HHH domain AhyD4_RS21630 PF00575 S1 RNA binding domain AhyD4_RS21630 PF09371 Tex-like protein N-terminal domain AhyD4_RS21630 PF16921 Tex protein YqgF-like domain AhyD4_RS21650 PF00561 alpha/beta hydrolase fold AhyD4_RS21655 PF00156 Phosphoribosyl transferase domain AhyD4_RS21660 PF01106 NifU-like domain AhyD4_RS21660 PF01521 Iron-sulphur cluster biosynthesis AhyD4_RS21665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AhyD4_RS21665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AhyD4_RS21670 PF02556 Preprotein translocase subunit SecB AhyD4_RS21675 PF00581 Rhodanese-like domain AhyD4_RS21680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AhyD4_RS21680 PF01676 Metalloenzyme superfamily AhyD4_RS21685 PF01551 Peptidase family M23 AhyD4_RS21695 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS21695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS21700 PF01081 KDPG and KHG aldolase AhyD4_RS21705 PF00920 Dehydratase family AhyD4_RS21710 PF01202 Shikimate kinase AhyD4_RS21715 PF02447 GntP family permease AhyD4_RS21720 PF13091 PLD-like domain AhyD4_RS21725 PF00271 Helicase conserved C-terminal domain AhyD4_RS21725 PF17191 RecG wedge domain AhyD4_RS21725 PF00270 DEAD/DEAH box helicase AhyD4_RS21735 PF09500 Putative thioesterase (yiiD_Cterm) AhyD4_RS21735 PF00583 Acetyltransferase (GNAT) family AhyD4_RS21745 PF02580 D-Tyr-tRNA(Tyr) deacylase AhyD4_RS21750 PF03631 Virulence factor BrkB AhyD4_RS21755 PF00679 Elongation factor G C-terminus AhyD4_RS21755 PF00009 Elongation factor Tu GTP binding domain AhyD4_RS21755 PF03144 Elongation factor Tu domain 2 AhyD4_RS21760 PF03951 Glutamine synthetase, beta-Grasp domain AhyD4_RS21760 PF00120 Glutamine synthetase, catalytic domain AhyD4_RS21770 PF00989 PAS fold AhyD4_RS21770 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS21770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS21775 PF02954 Bacterial regulatory protein, Fis family AhyD4_RS21775 PF00072 Response regulator receiver domain AhyD4_RS21775 PF00158 Sigma-54 interaction domain AhyD4_RS21780 PF00962 Adenosine/AMP deaminase AhyD4_RS21785 PF04055 Radical SAM superfamily AhyD4_RS21785 PF06969 HemN C-terminal domain AhyD4_RS21790 PF10675 Protein of unknown function (DUF2489) AhyD4_RS21795 PF04220 Der GTPase activator (YihI) AhyD4_RS21805 PF00034 Cytochrome c AhyD4_RS21810 PF01926 50S ribosome-binding GTPase AhyD4_RS21815 PF07369 Protein of unknown function (DUF1488) AhyD4_RS21820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AhyD4_RS21820 PF01488 Shikimate / quinate 5-dehydrogenase AhyD4_RS21820 PF08501 Shikimate dehydrogenase substrate binding domain AhyD4_RS21825 PF01218 Coproporphyrinogen III oxidase AhyD4_RS21830 PF01300 Telomere recombination AhyD4_RS21835 PF00731 AIR carboxylase AhyD4_RS21840 PF01396 Topoisomerase DNA binding C4 zinc finger AhyD4_RS21845 PF04361 Protein of unknown function (DUF494) AhyD4_RS21850 PF17782 DprA winged helix domain AhyD4_RS21850 PF02481 DNA recombination-mediator protein A AhyD4_RS21860 PF01327 Polypeptide deformylase AhyD4_RS21865 PF02911 Formyl transferase, C-terminal domain AhyD4_RS21865 PF00551 Formyl transferase AhyD4_RS21870 PF01189 16S rRNA methyltransferase RsmB/F AhyD4_RS21870 PF01029 NusB family AhyD4_RS21875 PF02254 TrkA-N domain AhyD4_RS21875 PF02080 TrkA-C domain AhyD4_RS21880 PF02386 Cation transport protein AhyD4_RS21885 PF02646 RmuC family AhyD4_RS21900 PF02082 Transcriptional regulator AhyD4_RS21905 PF00294 pfkB family carbohydrate kinase AhyD4_RS21910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AhyD4_RS21910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AhyD4_RS21915 PF00958 GMP synthase C terminal domain AhyD4_RS21915 PF00117 Glutamine amidotransferase class-I AhyD4_RS21915 PF02540 NAD synthase AhyD4_RS21925 PF00202 Aminotransferase class-III AhyD4_RS21930 PF01381 Helix-turn-helix AhyD4_RS21930 PF07883 Cupin domain AhyD4_RS21935 PF00171 Aldehyde dehydrogenase family AhyD4_RS21945 PF00892 EamA-like transporter family AhyD4_RS21950 PF12833 Helix-turn-helix domain AhyD4_RS21955 PF01810 LysE type translocator AhyD4_RS21960 PF00689 Cation transporting ATPase, C-terminus AhyD4_RS21960 PF00690 Cation transporter/ATPase, N-terminus AhyD4_RS21965 PF04143 Sulphur transport AhyD4_RS21970 PF01810 LysE type translocator AhyD4_RS21980 PF06206 CpeT/CpcT family (DUF1001) AhyD4_RS22005 PF14001 YdfZ protein AhyD4_RS22015 PF03466 LysR substrate binding domain AhyD4_RS22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS22025 PF13361 UvrD-like helicase C-terminal domain AhyD4_RS22025 PF00580 UvrD/REP helicase N-terminal domain AhyD4_RS22030 PF02608 ABC transporter substrate-binding protein PnrA-like AhyD4_RS22035 PF00005 ABC transporter AhyD4_RS22040 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS22045 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS22050 PF03466 LysR substrate binding domain AhyD4_RS22055 PF08240 Alcohol dehydrogenase GroES-like domain AhyD4_RS22055 PF00107 Zinc-binding dehydrogenase AhyD4_RS22060 PF00756 Putative esterase AhyD4_RS22070 PF12867 DinB superfamily AhyD4_RS22070 PF03781 Sulfatase-modifying factor enzyme 1 AhyD4_RS22075 PF13593 SBF-like CPA transporter family (DUF4137) AhyD4_RS22080 PF13520 Amino acid permease AhyD4_RS22085 PF01588 Putative tRNA binding domain AhyD4_RS22090 PF13520 Amino acid permease AhyD4_RS22095 PF04074 YhcH/YjgK/YiaL AhyD4_RS22100 PF02837 Glycosyl hydrolases family 2, sugar binding domain AhyD4_RS22100 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AhyD4_RS22100 PF00703 Glycosyl hydrolases family 2 AhyD4_RS22100 PF16353 Domain of unknown function(DUF4981) AhyD4_RS22100 PF02929 Beta galactosidase small chain AhyD4_RS22105 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS22140 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS22145 PF01367 5'-3' exonuclease, C-terminal SAM fold AhyD4_RS22145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AhyD4_RS22145 PF00476 DNA polymerase family A AhyD4_RS22145 PF01612 3'-5' exonuclease AhyD4_RS22155 PF06005 Cell division protein ZapB AhyD4_RS22165 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS22165 PF06426 Serine acetyltransferase, N-terminal AhyD4_RS22170 PF01545 Cation efflux family AhyD4_RS22170 PF16916 Dimerisation domain of Zinc Transporter AhyD4_RS22175 PF00072 Response regulator receiver domain AhyD4_RS22175 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS22180 PF00672 HAMP domain AhyD4_RS22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS22180 PF16527 Two-component sensor protein CpxA, periplasmic domain AhyD4_RS22180 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS22185 PF00588 SpoU rRNA Methylase family AhyD4_RS22190 PF01554 MatE AhyD4_RS22195 PF02630 SCO1/SenC AhyD4_RS22205 PF01726 LexA DNA binding domain AhyD4_RS22205 PF00717 Peptidase S24-like AhyD4_RS22210 PF01553 Acyltransferase AhyD4_RS22215 PF01040 UbiA prenyltransferase family AhyD4_RS22220 PF04345 Chorismate lyase AhyD4_RS22225 PF03748 Flagellar basal body-associated protein FliL AhyD4_RS22235 PF00107 Zinc-binding dehydrogenase AhyD4_RS22235 PF08240 Alcohol dehydrogenase GroES-like domain AhyD4_RS22240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AhyD4_RS22240 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS22245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhyD4_RS22255 PF03611 PTS system sugar-specific permease component AhyD4_RS22260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AhyD4_RS22265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AhyD4_RS22270 PF00535 Glycosyl transferase family 2 AhyD4_RS22275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AhyD4_RS22280 PF01467 Cytidylyltransferase-like AhyD4_RS22285 PF04393 Protein of unknown function (DUF535) AhyD4_RS22290 PF06827 Zinc finger found in FPG and IleRS AhyD4_RS22290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AhyD4_RS22290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AhyD4_RS22300 PF00471 Ribosomal protein L33 AhyD4_RS22305 PF04002 RadC-like JAB domain AhyD4_RS22310 PF02441 Flavoprotein AhyD4_RS22310 PF04127 DNA / pantothenate metabolism flavoprotein AhyD4_RS22315 PF00692 dUTPase AhyD4_RS22320 PF00440 Bacterial regulatory proteins, tetR family AhyD4_RS22325 PF00924 Mechanosensitive ion channel AhyD4_RS22325 PF05552 Conserved TM helix AhyD4_RS22340 PF00342 Phosphoglucose isomerase AhyD4_RS22345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AhyD4_RS22345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AhyD4_RS22350 PF03466 LysR substrate binding domain AhyD4_RS22350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhyD4_RS22365 PF00583 Acetyltransferase (GNAT) family AhyD4_RS22365 PF13380 CoA binding domain AhyD4_RS22365 PF13607 Succinyl-CoA ligase like flavodoxin domain AhyD4_RS22390 PF12724 Flavodoxin domain AhyD4_RS22395 PF02386 Cation transport protein AhyD4_RS22400 PF01205 Uncharacterized protein family UPF0029 AhyD4_RS22400 PF09186 Domain of unknown function (DUF1949) AhyD4_RS22405 PF00557 Metallopeptidase family M24 AhyD4_RS22410 PF13193 AMP-binding enzyme C-terminal domain AhyD4_RS22410 PF00501 AMP-binding enzyme AhyD4_RS22415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AhyD4_RS22415 PF00378 Enoyl-CoA hydratase/isomerase AhyD4_RS22415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AhyD4_RS22420 PF02803 Thiolase, C-terminal domain AhyD4_RS22420 PF00108 Thiolase, N-terminal domain AhyD4_RS22425 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS22425 PF00072 Response regulator receiver domain AhyD4_RS22430 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS22430 PF00672 HAMP domain AhyD4_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS22435 PF01547 Bacterial extracellular solute-binding protein AhyD4_RS22445 PF01206 Sulfurtransferase TusA AhyD4_RS22450 PF01042 Endoribonuclease L-PSP AhyD4_RS22455 PF13488 Glycine zipper AhyD4_RS22455 PF00691 OmpA family AhyD4_RS22460 PF00857 Isochorismatase family AhyD4_RS22465 PF03352 Methyladenine glycosylase AhyD4_RS22470 PF02091 Glycyl-tRNA synthetase alpha subunit AhyD4_RS22475 PF02092 Glycyl-tRNA synthetase beta subunit AhyD4_RS22475 PF05746 DALR anticodon binding domain AhyD4_RS22490 PF01747 ATP-sulfurylase AhyD4_RS22490 PF14306 PUA-like domain AhyD4_RS22510 PF03222 Tryptophan/tyrosine permease family AhyD4_RS22515 PF12801 4Fe-4S binding domain AhyD4_RS22525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhyD4_RS22525 PF18113 Rubredoxin binding C-terminal domain AhyD4_RS22530 PF00753 Metallo-beta-lactamase superfamily AhyD4_RS22530 PF00301 Rubredoxin AhyD4_RS22530 PF00258 Flavodoxin AhyD4_RS22535 PF01590 GAF domain AhyD4_RS22535 PF00158 Sigma-54 interaction domain AhyD4_RS22540 PF07702 UTRA domain AhyD4_RS22540 PF00392 Bacterial regulatory proteins, gntR family AhyD4_RS22545 PF02378 Phosphotransferase system, EIIC AhyD4_RS22545 PF00367 phosphotransferase system, EIIB AhyD4_RS22550 PF02056 Family 4 glycosyl hydrolase AhyD4_RS22550 PF11975 Family 4 glycosyl hydrolase C-terminal domain AhyD4_RS22555 PF00356 Bacterial regulatory proteins, lacI family AhyD4_RS22560 PF13458 Periplasmic binding protein AhyD4_RS22565 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS22570 PF11862 Domain of unknown function (DUF3382) AhyD4_RS22570 PF02653 Branched-chain amino acid transport system / permease component AhyD4_RS22575 PF00005 ABC transporter AhyD4_RS22575 PF12399 Branched-chain amino acid ATP-binding cassette transporter AhyD4_RS22580 PF00005 ABC transporter AhyD4_RS22595 PF00581 Rhodanese-like domain AhyD4_RS22600 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AhyD4_RS22600 PF01694 Rhomboid family AhyD4_RS22605 PF12262 Bacterial virulence factor lipase N-terminal AhyD4_RS22610 PF04380 Membrane fusogenic activity AhyD4_RS22615 PF00175 Oxidoreductase NAD-binding domain AhyD4_RS22620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AhyD4_RS22630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhyD4_RS22630 PF07498 Rho termination factor, N-terminal domain AhyD4_RS22630 PF07497 Rho termination factor, RNA-binding domain AhyD4_RS22635 PF00085 Thioredoxin AhyD4_RS22640 PF00270 DEAD/DEAH box helicase AhyD4_RS22640 PF00271 Helicase conserved C-terminal domain AhyD4_RS22645 PF02541 Ppx/GppA phosphatase family AhyD4_RS22660 PF04445 Putative SAM-dependent methyltransferase AhyD4_RS22665 PF00990 Diguanylate cyclase, GGDEF domain AhyD4_RS22665 PF03707 Bacterial signalling protein N terminal repeat AhyD4_RS22665 PF00563 EAL domain AhyD4_RS22670 PF01432 Peptidase family M3 AhyD4_RS22675 PF00490 Delta-aminolevulinic acid dehydratase AhyD4_RS22680 PF01026 TatD related DNase AhyD4_RS22685 PF00902 Sec-independent protein translocase protein (TatC) AhyD4_RS22690 PF02416 mttA/Hcf106 family AhyD4_RS22695 PF02416 mttA/Hcf106 family AhyD4_RS22700 PF03109 ABC1 family AhyD4_RS22705 PF02036 SCP-2 sterol transfer family AhyD4_RS22710 PF01209 ubiE/COQ5 methyltransferase family AhyD4_RS22715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AhyD4_RS22720 PF07969 Amidohydrolase family AhyD4_RS22835 PF03544 Gram-negative bacterial TonB protein C-terminal AhyD4_RS22840 PF02472 Biopolymer transport protein ExbD/TolR AhyD4_RS22845 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS22850 PF01618 MotA/TolQ/ExbB proton channel family AhyD4_RS22860 PF00196 Bacterial regulatory proteins, luxR family AhyD4_RS22860 PF03472 Autoinducer binding domain AhyD4_RS22865 PF01380 SIS domain AhyD4_RS22870 PF00455 DeoR C terminal sensor domain AhyD4_RS22870 PF08220 DeoR-like helix-turn-helix domain AhyD4_RS22875 PF00072 Response regulator receiver domain AhyD4_RS22875 PF00486 Transcriptional regulatory protein, C terminal AhyD4_RS22880 PF00672 HAMP domain AhyD4_RS22880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS22880 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS22885 PF00905 Penicillin binding protein transpeptidase domain AhyD4_RS22890 PF06123 Inner membrane protein CreD AhyD4_RS22895 PF12804 MobA-like NTP transferase domain AhyD4_RS22895 PF14602 Hexapeptide repeat of succinyl-transferase AhyD4_RS22895 PF00132 Bacterial transferase hexapeptide (six repeats) AhyD4_RS22900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AhyD4_RS22900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AhyD4_RS22905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AhyD4_RS22905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhyD4_RS22910 PF00231 ATP synthase AhyD4_RS22915 PF02874 ATP synthase alpha/beta family, beta-barrel domain AhyD4_RS22915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhyD4_RS22915 PF00306 ATP synthase alpha/beta chain, C terminal domain AhyD4_RS22920 PF00213 ATP synthase delta (OSCP) subunit AhyD4_RS22925 PF00430 ATP synthase B/B' CF(0) AhyD4_RS22930 PF00137 ATP synthase subunit C AhyD4_RS22935 PF00119 ATP synthase A chain AhyD4_RS22945 PF17762 HTH domain found in ParB protein AhyD4_RS22945 PF02195 ParB-like nuclease domain AhyD4_RS22950 PF13614 AAA domain AhyD4_RS22955 PF02527 rRNA small subunit methyltransferase G AhyD4_RS22960 PF13932 GidA associated domain AhyD4_RS22960 PF01134 Glucose inhibited division protein A AhyD4_RS22965 PF00258 Flavodoxin AhyD4_RS22970 PF07715 TonB-dependent Receptor Plug Domain AhyD4_RS22970 PF00593 TonB dependent receptor AhyD4_RS22975 PF00005 ABC transporter AhyD4_RS22980 PF00005 ABC transporter AhyD4_RS22990 PF01032 FecCD transport family AhyD4_RS22995 PF10396 GTP-binding protein TrmE N-terminus AhyD4_RS22995 PF12631 MnmE helical domain AhyD4_RS22995 PF01926 50S ribosome-binding GTPase AhyD4_RS23000 PF02096 60Kd inner membrane protein AhyD4_RS23000 PF14849 YidC periplasmic domain AhyD4_RS23005 PF00825 Ribonuclease P AhyD4_RS23010 PF00468 Ribosomal protein L34 AhyD4_RS23015 PF00005 ABC transporter AhyD4_RS23020 PF00528 Binding-protein-dependent transport system inner membrane component AhyD4_RS23025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhyD4_RS23055 PF13426 PAS domain AhyD4_RS23055 PF00512 His Kinase A (phospho-acceptor) domain AhyD4_RS23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS23055 PF00672 HAMP domain AhyD4_RS23125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhyD4_RS23195 PF13291 ACT domain AhyD4_RS23195 PF04607 Region found in RelA / SpoT proteins AhyD4_RS23195 PF02824 TGS domain AhyD4_RS23245 PF00892 EamA-like transporter family AhyD4_RS23475 PF04002 RadC-like JAB domain AhyD4_RS23685 PF13356 Arm DNA-binding domain AhyD4_RS23685 PF00589 Phage integrase family AhyD4_RS23815 PF00204 DNA gyrase B AhyD4_RS23815 PF00986 DNA gyrase B subunit, carboxyl terminus AhyD4_RS23815 PF18053 DNA gyrase B subunit insert domain AhyD4_RS23815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS23815 PF01751 Toprim domain AhyD4_RS23840 PF01751 Toprim domain AhyD4_RS23840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhyD4_RS23840 PF18053 DNA gyrase B subunit insert domain AhyD4_RS23840 PF00204 DNA gyrase B AhyD4_RS23840 PF00986 DNA gyrase B subunit, carboxyl terminus