AHML_RS00005	SM00382	ATPases associated with a variety of cellular activities
AHML_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AHML_RS00010	SM00480	DNA polymerase III beta subunit
AHML_RS00020	SM00387	Histidine kinase-like ATPases
AHML_RS00020	SM00433	TopoisomeraseII
AHML_RS00055	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS00065	SM00448	cheY-homologous receiver domain
AHML_RS00065	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS00070	SM00387	Histidine kinase-like ATPases
AHML_RS00070	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS00095	SM00091	PAS domain
AHML_RS00095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS00095	SM00387	Histidine kinase-like ATPases
AHML_RS00135	SM00458	Ricin-type beta-trefoil
AHML_RS00155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS00155	SM00387	Histidine kinase-like ATPases
AHML_RS00155	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS00160	SM00448	cheY-homologous receiver domain
AHML_RS00190	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS00190	SM00954	Region found in RelA / SpoT proteins
AHML_RS00195	SM01409	AHML_RS00195
AHML_RS00200	SM00072	Guanylate kinase homologues.
AHML_RS00215	SM00267	diguanylate cyclase
AHML_RS00255	SM00267	diguanylate cyclase
AHML_RS00295	SM00487	DEAD-like helicases superfamily
AHML_RS00365	SM00421	helix_turn_helix, Lux Regulon
AHML_RS00365	SM00448	cheY-homologous receiver domain
AHML_RS00370	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS00370	SM00387	Histidine kinase-like ATPases
AHML_RS00370	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS00370	SM00448	cheY-homologous receiver domain
AHML_RS00380	SM00387	Histidine kinase-like ATPases
AHML_RS00385	SM00448	cheY-homologous receiver domain
AHML_RS00385	SM00850	LytTr DNA-binding domain
AHML_RS00400	SM01001	AIR carboxylase
AHML_RS00430	SM00360	RNA recognition motif
AHML_RS00510	SM01004	Delta-aminolevulinic acid dehydratase
AHML_RS00520	SM00052	Putative diguanylate phosphodiesterase
AHML_RS00520	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS00520	SM00091	PAS domain
AHML_RS00520	SM00267	diguanylate cyclase
AHML_RS00545	SM00487	DEAD-like helicases superfamily
AHML_RS00545	SM00490	helicase superfamily c-terminal domain
AHML_RS00555	SM00357	Cold shock protein domain
AHML_RS00555	SM00382	ATPases associated with a variety of cellular activities
AHML_RS00555	SM00959	Rho termination factor, N-terminal domain
AHML_RS00590	SM00450	Rhodanese Homology Domain
AHML_RS00600	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS00605	SM00382	ATPases associated with a variety of cellular activities
AHML_RS00610	SM00382	ATPases associated with a variety of cellular activities
AHML_RS00630	SM00354	helix_turn _helix lactose operon repressor
AHML_RS00645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS00645	SM00866	AHML_RS00645
AHML_RS00650	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS00650	SM00382	ATPases associated with a variety of cellular activities
AHML_RS00655	SM00849	Metallo-beta-lactamase superfamily
AHML_RS00710	SM00836	DALR anticodon binding domain
AHML_RS00755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS00755	SM00387	Histidine kinase-like ATPases
AHML_RS00755	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS00760	SM00448	cheY-homologous receiver domain
AHML_RS00760	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS00820	SM00881	CoA binding domain
AHML_RS00890	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AHML_RS00890	SM01232	AHML_RS00890
AHML_RS00940	SM00354	helix_turn _helix lactose operon repressor
AHML_RS00945	SM00829	Enoylreductase
AHML_RS00970	SM00563	Phosphate acyltransferases
AHML_RS01000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS01000	SM00387	Histidine kinase-like ATPases
AHML_RS01000	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS01005	SM00448	cheY-homologous receiver domain
AHML_RS01005	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS01015	SM00971	Serine acetyltransferase, N-terminal
AHML_RS01035	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AHML_RS01035	SM00474	3'-5' exonuclease
AHML_RS01035	SM00475	5'-3' exonuclease
AHML_RS01035	SM00482	DNA polymerase A domain
AHML_RS01080	SM00354	helix_turn _helix lactose operon repressor
AHML_RS01085	SM01038	Beta galactosidase small chain
AHML_RS01130	SM00829	Enoylreductase
AHML_RS01150	SM00382	ATPases associated with a variety of cellular activities
AHML_RS01165	SM01321	AHML_RS01165
AHML_RS01225	SM00831	Cation transporter/ATPase, N-terminus
AHML_RS01235	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS01250	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS01270	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AHML_RS01270	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHML_RS01325	SM00257	Lysin motif
AHML_RS01345	SM01001	AIR carboxylase
AHML_RS01395	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS01405	SM00382	ATPases associated with a variety of cellular activities
AHML_RS01405	SM00448	cheY-homologous receiver domain
AHML_RS01410	SM00091	PAS domain
AHML_RS01410	SM00387	Histidine kinase-like ATPases
AHML_RS01410	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS01420	SM01230	AHML_RS01420
AHML_RS01455	SM00487	DEAD-like helicases superfamily
AHML_RS01455	SM00490	helicase superfamily c-terminal domain
AHML_RS01460	SM00155	Phospholipase D. Active site motifs.
AHML_RS01485	SM00354	helix_turn _helix lactose operon repressor
AHML_RS01505	SM00450	Rhodanese Homology Domain
AHML_RS01550	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS01550	SM00732	Likely ribonuclease with RNase H fold.
AHML_RS01560	SM00448	cheY-homologous receiver domain
AHML_RS01560	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS01565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS01565	SM00387	Histidine kinase-like ATPases
AHML_RS01565	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS01575	SM01403	AHML_RS01575
AHML_RS01595	SM01382	AHML_RS01595
AHML_RS01595	SM01383	AHML_RS01595
AHML_RS01610	SM00322	K homology RNA-binding domain
AHML_RS01630	SM01374	AHML_RS01630
AHML_RS01690	SM00363	S4 RNA-binding domain
AHML_RS01690	SM01390	AHML_RS01690
AHML_RS01695	SM00662	RNA polymerases D
AHML_RS01755	SM00822	AHML_RS01755
AHML_RS01840	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS01845	SM00155	Phospholipase D. Active site motifs.
AHML_RS01885	SM00382	ATPases associated with a variety of cellular activities
AHML_RS01900	SM00947	Carbonic anhydrase
AHML_RS01905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS01905	SM00866	AHML_RS01905
AHML_RS01935	SM00052	Putative diguanylate phosphodiesterase
AHML_RS01940	SM00052	Putative diguanylate phosphodiesterase
AHML_RS01940	SM00267	diguanylate cyclase
AHML_RS01970	SM00965	Secretin and TonB N terminus short domain
AHML_RS01985	SM00382	ATPases associated with a variety of cellular activities
AHML_RS02055	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS02065	SM00886	Stress responsive A/B Barrel Domain
AHML_RS02125	SM00448	cheY-homologous receiver domain
AHML_RS02125	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS02130	SM00387	Histidine kinase-like ATPases
AHML_RS02130	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS02130	SM00448	cheY-homologous receiver domain
AHML_RS02135	SM00331	Sigma factor PP2C-like phosphatases
AHML_RS02135	SM00387	Histidine kinase-like ATPases
AHML_RS02145	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS02145	SM00091	PAS domain
AHML_RS02150	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS02275	SM01018	B12 binding domain
AHML_RS02290	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS02295	SM00448	cheY-homologous receiver domain
AHML_RS02295	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS02310	SM00999	Aerolysin toxin
AHML_RS02340	SM00876	Biotin and Thiamin Synthesis associated domain
AHML_RS02365	SM00267	diguanylate cyclase
AHML_RS02475	SM01219	AHML_RS02475
AHML_RS02510	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS02540	SM00382	ATPases associated with a variety of cellular activities
AHML_RS02555	SM00852	Probable molybdopterin binding domain
AHML_RS02575	SM00344	helix_turn_helix ASNC type
AHML_RS02595	SM00642	Alpha-amylase domain
AHML_RS02735	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS02745	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AHML_RS02795	SM00487	DEAD-like helicases superfamily
AHML_RS02795	SM00490	helicase superfamily c-terminal domain
AHML_RS02875	SM00357	Cold shock protein domain
AHML_RS02875	SM00955	AHML_RS02875
AHML_RS02890	SM00421	helix_turn_helix, Lux Regulon
AHML_RS02925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS02925	SM00895	AHML_RS02925
AHML_RS02940	SM00363	S4 RNA-binding domain
AHML_RS02955	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03005	SM00421	helix_turn_helix, Lux Regulon
AHML_RS03040	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS03075	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHML_RS03120	SM01266	AHML_RS03120
AHML_RS03150	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS03165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS03165	SM01049	AHML_RS03165
AHML_RS03195	SM00245	tail specific protease
AHML_RS03275	SM00487	DEAD-like helicases superfamily
AHML_RS03275	SM00490	helicase superfamily c-terminal domain
AHML_RS03295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS03360	SM00938	Nitrogen regulatory protein P-II
AHML_RS03375	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03390	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03395	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS03395	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AHML_RS03415	SM00671	Sel1-like repeats.
AHML_RS03430	SM01091	Transporter associated domain
AHML_RS03440	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03440	SM00962	SRP54-type protein, GTPase domain
AHML_RS03440	SM00963	SRP54-type protein, helical bundle domain
AHML_RS03470	SM00927	DNA mismatch repair enzyme MutH
AHML_RS03480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS03510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHML_RS03525	SM00904	Riboflavin kinase
AHML_RS03610	SM00938	Nitrogen regulatory protein P-II
AHML_RS03625	SM00267	diguanylate cyclase
AHML_RS03630	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS03630	SM00357	Cold shock protein domain
AHML_RS03630	SM00955	AHML_RS03630
AHML_RS03635	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AHML_RS03700	SM00829	Enoylreductase
AHML_RS03745	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03750	SM00327	von Willebrand factor (vWF) type A domain
AHML_RS03755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS03755	SM00091	PAS domain
AHML_RS03755	SM00267	diguanylate cyclase
AHML_RS03760	SM00028	Tetratricopeptide repeats
AHML_RS03760	SM00267	diguanylate cyclase
AHML_RS03775	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS03815	SM00849	Metallo-beta-lactamase superfamily
AHML_RS03825	SM00487	DEAD-like helicases superfamily
AHML_RS03825	SM00490	helicase superfamily c-terminal domain
AHML_RS03910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS03910	SM00387	Histidine kinase-like ATPases
AHML_RS03910	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS03915	SM00448	cheY-homologous receiver domain
AHML_RS03915	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS03925	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03930	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS03935	SM00382	ATPases associated with a variety of cellular activities
AHML_RS03985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS03985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS03995	SM00287	Bacterial SH3 domain homologues
AHML_RS04020	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AHML_RS04120	SM00358	Double-stranded RNA binding motif
AHML_RS04120	SM00535	Ribonuclease III family
AHML_RS04185	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHML_RS04185	SM01134	AHML_RS04185
AHML_RS04190	SM00644	AHML_RS04190
AHML_RS04200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS04200	SM00387	Histidine kinase-like ATPases
AHML_RS04200	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS04200	SM00448	cheY-homologous receiver domain
AHML_RS04210	SM00954	Region found in RelA / SpoT proteins
AHML_RS04225	SM01192	AHML_RS04225
AHML_RS04225	SM01193	AHML_RS04225
AHML_RS04265	SM00257	Lysin motif
AHML_RS04285	SM00400	zinc finger
AHML_RS04285	SM00493	AHML_RS04285
AHML_RS04285	SM00766	DNA primase DnaG DnaB-binding
AHML_RS04300	SM01126	AHML_RS04300
AHML_RS04305	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AHML_RS04305	SM00632	AHML_RS04305
AHML_RS04305	SM00642	Alpha-amylase domain
AHML_RS04320	SM01209	AHML_RS04320
AHML_RS04320	SM01210	AHML_RS04320
AHML_RS04325	SM00798	AICARFT/IMPCHase bienzyme
AHML_RS04325	SM00851	MGS-like domain
AHML_RS04330	SM00422	helix_turn_helix, mercury resistance
AHML_RS04345	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS04420	SM00883	Chaperonin 10 Kd subunit
AHML_RS04435	SM00052	Putative diguanylate phosphodiesterase
AHML_RS04435	SM00267	diguanylate cyclase
AHML_RS04450	SM00487	DEAD-like helicases superfamily
AHML_RS04450	SM00490	helicase superfamily c-terminal domain
AHML_RS04490	SM00670	Large family of predicted nucleotide-binding domains
AHML_RS04495	SM00382	ATPases associated with a variety of cellular activities
AHML_RS04530	SM01329	AHML_RS04530
AHML_RS04535	SM00917	LeuA allosteric (dimerisation) domain
AHML_RS04545	SM00014	Acid phosphatase homologues
AHML_RS04595	SM01130	AHML_RS04595
AHML_RS04640	SM00073	Histidine Phosphotransfer domain
AHML_RS04640	SM00091	PAS domain
AHML_RS04640	SM00387	Histidine kinase-like ATPases
AHML_RS04640	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS04640	SM00448	cheY-homologous receiver domain
AHML_RS04645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS04655	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS04655	SM00073	Histidine Phosphotransfer domain
AHML_RS04655	SM00091	PAS domain
AHML_RS04655	SM00387	Histidine kinase-like ATPases
AHML_RS04655	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS04655	SM00448	cheY-homologous receiver domain
AHML_RS04660	SM00052	Putative diguanylate phosphodiesterase
AHML_RS04660	SM00448	cheY-homologous receiver domain
AHML_RS04665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS04665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS04670	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AHML_RS04685	SM00382	ATPases associated with a variety of cellular activities
AHML_RS04685	SM00930	AHML_RS04685
AHML_RS04720	SM00257	Lysin motif
AHML_RS04720	SM00646	AHML_RS04720
AHML_RS04725	SM00853	MutL C terminal dimerisation domain
AHML_RS04725	SM01340	AHML_RS04725
AHML_RS04745	SM00244	prohibitin homologues
AHML_RS04750	SM00244	prohibitin homologues
AHML_RS04800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS04810	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS04825	SM00650	Ribosomal RNA adenine dimethylases
AHML_RS04855	SM00271	DnaJ molecular chaperone homology domain
AHML_RS04870	SM00382	ATPases associated with a variety of cellular activities
AHML_RS04995	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05005	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05035	SM00507	HNH nucleases
AHML_RS05190	SM01133	AHML_RS05190
AHML_RS05210	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05260	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS05270	SM00387	Histidine kinase-like ATPases
AHML_RS05270	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS05270	SM00448	cheY-homologous receiver domain
AHML_RS05275	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AHML_RS05275	SM00495	Chitin-binding domain type 3
AHML_RS05275	SM00636	AHML_RS05275
AHML_RS05285	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AHML_RS05285	SM00495	Chitin-binding domain type 3
AHML_RS05295	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS05295	SM00419	helix_turn_helix, cAMP Regulatory protein
AHML_RS05355	SM00984	UDP binding domain
AHML_RS05365	SM00267	diguanylate cyclase
AHML_RS05375	SM00260	Two component signalling adaptor domain
AHML_RS05375	SM00448	cheY-homologous receiver domain
AHML_RS05400	SM00320	WD40 repeats
AHML_RS05410	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05410	SM00448	cheY-homologous receiver domain
AHML_RS05435	SM00052	Putative diguanylate phosphodiesterase
AHML_RS05440	SM00978	AHML_RS05440
AHML_RS05445	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05450	SM01005	Alanine racemase, C-terminal domain
AHML_RS05465	SM00052	Putative diguanylate phosphodiesterase
AHML_RS05495	SM00448	cheY-homologous receiver domain
AHML_RS05505	SM00138	Methyltransferase, chemotaxis proteins 
AHML_RS05510	SM00091	PAS domain
AHML_RS05510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS05510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS05515	SM00260	Two component signalling adaptor domain
AHML_RS05520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS05520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS05525	SM00073	Histidine Phosphotransfer domain
AHML_RS05525	SM00260	Two component signalling adaptor domain
AHML_RS05525	SM00387	Histidine kinase-like ATPases
AHML_RS05525	SM01231	AHML_RS05525
AHML_RS05535	SM00448	cheY-homologous receiver domain
AHML_RS05540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS05585	SM00463	Small MutS-related domain
AHML_RS05610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS05610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS05660	SM00382	ATPases associated with a variety of cellular activities
AHML_RS05675	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS05675	SM00419	helix_turn_helix, cAMP Regulatory protein
AHML_RS05715	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS05735	SM00487	DEAD-like helicases superfamily
AHML_RS05740	SM00487	DEAD-like helicases superfamily
AHML_RS05740	SM00490	helicase superfamily c-terminal domain
AHML_RS05760	SM00487	DEAD-like helicases superfamily
AHML_RS05760	SM00490	helicase superfamily c-terminal domain
AHML_RS05830	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS05870	SM00830	Chorismate mutase type II
AHML_RS05905	SM00422	helix_turn_helix, mercury resistance
AHML_RS05990	SM00421	helix_turn_helix, Lux Regulon
AHML_RS06095	SM00900	AHML_RS06095
AHML_RS06135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS06135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS06165	SM01329	AHML_RS06165
AHML_RS06170	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AHML_RS06170	SM00475	5'-3' exonuclease
AHML_RS06180	SM00267	diguanylate cyclase
AHML_RS06185	SM00028	Tetratricopeptide repeats
AHML_RS06265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS06310	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHML_RS06320	SM00935	Outer membrane protein (OmpH-like)
AHML_RS06350	SM00481	DNA polymerase alpha chain like domain
AHML_RS06360	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS06395	SM00849	Metallo-beta-lactamase superfamily
AHML_RS06415	SM00382	ATPases associated with a variety of cellular activities
AHML_RS06430	SM00977	TilS substrate C-terminal domain
AHML_RS06435	SM00267	diguanylate cyclase
AHML_RS06460	SM00421	helix_turn_helix, Lux Regulon
AHML_RS06460	SM00448	cheY-homologous receiver domain
AHML_RS06470	SM00642	Alpha-amylase domain
AHML_RS06495	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS06530	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AHML_RS06535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHML_RS06535	SM00292	breast cancer carboxy-terminal domain
AHML_RS06535	SM00532	Ligase N family
AHML_RS06570	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS06585	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS06595	SM00919	Malic enzyme, NAD binding domain
AHML_RS06595	SM01274	AHML_RS06595
AHML_RS06600	SM00387	Histidine kinase-like ATPases
AHML_RS06605	SM00448	cheY-homologous receiver domain
AHML_RS06615	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS06625	SM00382	ATPases associated with a variety of cellular activities
AHML_RS06645	SM00448	cheY-homologous receiver domain
AHML_RS06645	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS06650	SM00387	Histidine kinase-like ATPases
AHML_RS06650	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS06685	SM00382	ATPases associated with a variety of cellular activities
AHML_RS06745	SM00267	diguanylate cyclase
AHML_RS06760	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS06765	SM00919	Malic enzyme, NAD binding domain
AHML_RS06765	SM01274	AHML_RS06765
AHML_RS06790	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS06805	SM00267	diguanylate cyclase
AHML_RS06825	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS06870	SM00642	Alpha-amylase domain
AHML_RS06890	SM00155	Phospholipase D. Active site motifs.
AHML_RS06955	SM00487	DEAD-like helicases superfamily
AHML_RS06955	SM00490	helicase superfamily c-terminal domain
AHML_RS07045	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS07115	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07130	SM01007	Class II Aldolase and Adducin N-terminal domain
AHML_RS07150	SM01134	AHML_RS07150
AHML_RS07160	SM01130	AHML_RS07160
AHML_RS07235	SM00877	AHML_RS07235
AHML_RS07265	SM00877	AHML_RS07265
AHML_RS07270	SM00877	AHML_RS07270
AHML_RS07275	SM00877	AHML_RS07275
AHML_RS07285	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS07315	SM00481	DNA polymerase alpha chain like domain
AHML_RS07355	SM00387	Histidine kinase-like ATPases
AHML_RS07360	SM00448	cheY-homologous receiver domain
AHML_RS07360	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS07365	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07375	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07400	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS07405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS07435	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07495	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07495	SM00962	SRP54-type protein, GTPase domain
AHML_RS07510	SM00448	cheY-homologous receiver domain
AHML_RS07520	SM00073	Histidine Phosphotransfer domain
AHML_RS07520	SM00260	Two component signalling adaptor domain
AHML_RS07520	SM00387	Histidine kinase-like ATPases
AHML_RS07520	SM01231	AHML_RS07520
AHML_RS07525	SM00448	cheY-homologous receiver domain
AHML_RS07545	SM00260	Two component signalling adaptor domain
AHML_RS07550	SM00260	Two component signalling adaptor domain
AHML_RS07560	SM00382	ATPases associated with a variety of cellular activities
AHML_RS07660	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AHML_RS07740	SM00354	helix_turn _helix lactose operon repressor
AHML_RS07775	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS07780	SM01329	AHML_RS07780
AHML_RS07835	SM00487	DEAD-like helicases superfamily
AHML_RS07985	SM00959	Rho termination factor, N-terminal domain
AHML_RS08075	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHML_RS08105	SM00858	AHML_RS08105
AHML_RS08125	SM00382	ATPases associated with a variety of cellular activities
AHML_RS08195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS08195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS08220	SM01091	Transporter associated domain
AHML_RS08280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS08290	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS08290	SM00876	Biotin and Thiamin Synthesis associated domain
AHML_RS08315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS08330	SM00890	Domain of unknown function
AHML_RS08340	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS08415	SM00458	Ricin-type beta-trefoil
AHML_RS08495	SM01081	Putative carbohydrate binding domain
AHML_RS08550	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS08565	SM00382	ATPases associated with a variety of cellular activities
AHML_RS08640	SM00052	Putative diguanylate phosphodiesterase
AHML_RS08640	SM00267	diguanylate cyclase
AHML_RS08650	SM00354	helix_turn _helix lactose operon repressor
AHML_RS08675	SM00257	Lysin motif
AHML_RS08680	SM00849	Metallo-beta-lactamase superfamily
AHML_RS08695	SM00479	AHML_RS08695
AHML_RS08705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS08725	SM00073	Histidine Phosphotransfer domain
AHML_RS08735	SM00897	FIST N domain
AHML_RS08735	SM01204	AHML_RS08735
AHML_RS08740	SM00387	Histidine kinase-like ATPases
AHML_RS08740	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS08740	SM00448	cheY-homologous receiver domain
AHML_RS08745	SM00464	Found in ATP-dependent protease La (LON)
AHML_RS08750	SM00421	helix_turn_helix, Lux Regulon
AHML_RS08750	SM00448	cheY-homologous receiver domain
AHML_RS08755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS08755	SM00387	Histidine kinase-like ATPases
AHML_RS08760	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS08775	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS08800	SM00852	Probable molybdopterin binding domain
AHML_RS08830	SM00382	ATPases associated with a variety of cellular activities
AHML_RS08845	SM00852	Probable molybdopterin binding domain
AHML_RS08855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS08855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS08875	SM00867	YceI-like domain 
AHML_RS08885	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AHML_RS08895	SM00563	Phosphate acyltransferases
AHML_RS08920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS08920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS08945	SM00855	Phosphoglycerate mutase family
AHML_RS08950	SM00487	DEAD-like helicases superfamily
AHML_RS08950	SM00490	helicase superfamily c-terminal domain
AHML_RS08970	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AHML_RS08975	SM00363	S4 RNA-binding domain
AHML_RS09000	SM00871	Bacterial transcription activator, effector binding domain
AHML_RS09025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS09090	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHML_RS09090	SM01134	AHML_RS09090
AHML_RS09110	SM00830	Chorismate mutase type II
AHML_RS09185	SM00382	ATPases associated with a variety of cellular activities
AHML_RS09255	SM00382	ATPases associated with a variety of cellular activities
AHML_RS09260	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS09260	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AHML_RS09285	SM00052	Putative diguanylate phosphodiesterase
AHML_RS09285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS09285	SM00091	PAS domain
AHML_RS09285	SM00267	diguanylate cyclase
AHML_RS09290	SM00450	Rhodanese Homology Domain
AHML_RS09325	SM01359	AHML_RS09325
AHML_RS09325	SM01360	AHML_RS09325
AHML_RS09340	SM00981	AHML_RS09340
AHML_RS09410	SM00858	AHML_RS09410
AHML_RS09470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS09470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS09530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHML_RS09570	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS09585	SM01323	AHML_RS09585
AHML_RS09600	SM00450	Rhodanese Homology Domain
AHML_RS09605	SM00028	Tetratricopeptide repeats
AHML_RS09655	SM00271	DnaJ molecular chaperone homology domain
AHML_RS09680	SM00562	AHML_RS09680
AHML_RS09690	SM00028	Tetratricopeptide repeats
AHML_RS09695	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS09715	SM00564	beta-propeller repeat
AHML_RS09730	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS09735	SM01211	AHML_RS09735
AHML_RS09740	SM01126	AHML_RS09740
AHML_RS09780	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS09780	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AHML_RS09785	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AHML_RS09850	SM00360	RNA recognition motif
AHML_RS09875	SM00091	PAS domain
AHML_RS09880	SM00448	cheY-homologous receiver domain
AHML_RS09895	SM00052	Putative diguanylate phosphodiesterase
AHML_RS09895	SM00267	diguanylate cyclase
AHML_RS09940	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS09945	SM00411	bacterial (prokaryotic) histone like domain
AHML_RS09955	SM00028	Tetratricopeptide repeats
AHML_RS09960	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AHML_RS09970	SM01144	AHML_RS09970
AHML_RS09995	SM00528	Domain in histone-like proteins of HNS family
AHML_RS10010	SM01154	AHML_RS10010
AHML_RS10065	SM00357	Cold shock protein domain
AHML_RS10075	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10075	SM01086	C-terminal, D2-small domain, of ClpB protein
AHML_RS10080	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS10100	SM00267	diguanylate cyclase
AHML_RS10100	SM00448	cheY-homologous receiver domain
AHML_RS10110	SM00344	helix_turn_helix ASNC type
AHML_RS10115	SM00843	AHML_RS10115
AHML_RS10125	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10155	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10160	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10180	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10225	SM00091	PAS domain
AHML_RS10225	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10235	SM00267	diguanylate cyclase
AHML_RS10235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS10300	SM01007	Class II Aldolase and Adducin N-terminal domain
AHML_RS10315	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10325	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS10390	SM00825	Beta-ketoacyl synthase
AHML_RS10430	SM00861	Transketolase, pyrimidine binding domain
AHML_RS10445	SM00881	CoA binding domain
AHML_RS10470	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS10480	SM00866	AHML_RS10480
AHML_RS10520	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHML_RS10550	SM00822	AHML_RS10550
AHML_RS10555	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS10555	SM00871	Bacterial transcription activator, effector binding domain
AHML_RS10585	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS10690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS10690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS10690	SM01049	AHML_RS10690
AHML_RS10700	SM00091	PAS domain
AHML_RS10700	SM00387	Histidine kinase-like ATPases
AHML_RS10705	SM00448	cheY-homologous receiver domain
AHML_RS10725	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS10740	SM00487	DEAD-like helicases superfamily
AHML_RS10740	SM00490	helicase superfamily c-terminal domain
AHML_RS10765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS10780	SM00763	PrkA AAA domain
AHML_RS10785	SM00487	DEAD-like helicases superfamily
AHML_RS10785	SM00490	helicase superfamily c-terminal domain
AHML_RS10845	SM00387	Histidine kinase-like ATPases
AHML_RS10845	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS10845	SM00448	cheY-homologous receiver domain
AHML_RS10850	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10855	SM00382	ATPases associated with a variety of cellular activities
AHML_RS10920	SM01118	AHML_RS10920
AHML_RS10945	SM00487	DEAD-like helicases superfamily
AHML_RS10945	SM00490	helicase superfamily c-terminal domain
AHML_RS10955	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AHML_RS10970	SM01144	AHML_RS10970
AHML_RS10990	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS11005	SM00642	Alpha-amylase domain
AHML_RS11135	SM00782	PhnA Zinc-Ribbon
AHML_RS11145	SM00495	Chitin-binding domain type 3
AHML_RS11160	SM00855	Phosphoglycerate mutase family
AHML_RS11165	SM00091	PAS domain
AHML_RS11165	SM00267	diguanylate cyclase
AHML_RS11175	SM00463	Small MutS-related domain
AHML_RS11190	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS11195	SM00487	DEAD-like helicases superfamily
AHML_RS11195	SM00490	helicase superfamily c-terminal domain
AHML_RS11200	SM00953	AHML_RS11200
AHML_RS11215	SM00354	helix_turn _helix lactose operon repressor
AHML_RS11240	SM00354	helix_turn _helix lactose operon repressor
AHML_RS11280	SM00925	MltA specific insert domain
AHML_RS11310	SM00434	DNA Topoisomerase IV
AHML_RS11320	SM00671	Sel1-like repeats.
AHML_RS11325	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AHML_RS11350	SM00873	B3/4 domain
AHML_RS11350	SM00874	tRNA synthetase B5 domain
AHML_RS11350	SM00896	Ferredoxin-fold anticodon binding domain
AHML_RS11355	SM00411	bacterial (prokaryotic) histone like domain
AHML_RS11360	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS11360	SM00387	Histidine kinase-like ATPases
AHML_RS11360	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS11360	SM00448	cheY-homologous receiver domain
AHML_RS11385	SM00267	diguanylate cyclase
AHML_RS11390	SM00354	helix_turn _helix lactose operon repressor
AHML_RS11410	SM00382	ATPases associated with a variety of cellular activities
AHML_RS11445	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS11445	SM00419	helix_turn_helix, cAMP Regulatory protein
AHML_RS11500	SM00945	ProQ/FINO family
AHML_RS11505	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHML_RS11505	SM00245	tail specific protease
AHML_RS11535	SM00981	AHML_RS11535
AHML_RS11545	SM00382	ATPases associated with a variety of cellular activities
AHML_RS11580	SM00822	AHML_RS11580
AHML_RS11670	SM00382	ATPases associated with a variety of cellular activities
AHML_RS11690	SM00825	Beta-ketoacyl synthase
AHML_RS11700	SM00822	AHML_RS11700
AHML_RS11705	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AHML_RS11755	SM00363	S4 RNA-binding domain
AHML_RS11760	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS11800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS11805	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AHML_RS11830	SM00450	Rhodanese Homology Domain
AHML_RS11835	SM00849	Metallo-beta-lactamase superfamily
AHML_RS11840	SM00448	cheY-homologous receiver domain
AHML_RS11840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS11845	SM00387	Histidine kinase-like ATPases
AHML_RS11845	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS11845	SM00448	cheY-homologous receiver domain
AHML_RS11860	SM00382	ATPases associated with a variety of cellular activities
AHML_RS11860	SM00487	DEAD-like helicases superfamily
AHML_RS11860	SM00490	helicase superfamily c-terminal domain
AHML_RS11860	SM00847	Helicase associated domain (HA2)  Add an annotation
AHML_RS11865	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS11870	SM00421	helix_turn_helix, Lux Regulon
AHML_RS11885	SM00382	ATPases associated with a variety of cellular activities
AHML_RS11920	SM00857	Resolvase, N terminal domain
AHML_RS12010	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS12015	SM00341	Helicase and RNase D C-terminal
AHML_RS12015	SM00474	3'-5' exonuclease
AHML_RS12040	SM00491	AHML_RS12040
AHML_RS12080	SM00448	cheY-homologous receiver domain
AHML_RS12080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS12085	SM00091	PAS domain
AHML_RS12090	SM00073	Histidine Phosphotransfer domain
AHML_RS12090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS12090	SM00091	PAS domain
AHML_RS12090	SM00387	Histidine kinase-like ATPases
AHML_RS12090	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS12090	SM00448	cheY-homologous receiver domain
AHML_RS12125	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AHML_RS12135	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AHML_RS12140	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AHML_RS12160	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AHML_RS12165	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AHML_RS12225	SM00382	ATPases associated with a variety of cellular activities
AHML_RS12255	SM01322	AHML_RS12255
AHML_RS12285	SM00327	von Willebrand factor (vWF) type A domain
AHML_RS12290	SM00028	Tetratricopeptide repeats
AHML_RS12320	SM00052	Putative diguanylate phosphodiesterase
AHML_RS12330	SM00422	helix_turn_helix, mercury resistance
AHML_RS12410	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS12480	SM00486	DNA polymerase type-B family
AHML_RS12490	SM00267	diguanylate cyclase
AHML_RS12500	SM00090	RIO-like kinase
AHML_RS12530	SM00518	AP endonuclease family 2
AHML_RS12540	SM00822	AHML_RS12540
AHML_RS12545	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS12555	SM00052	Putative diguanylate phosphodiesterase
AHML_RS12555	SM00267	diguanylate cyclase
AHML_RS12570	SM00267	diguanylate cyclase
AHML_RS12620	SM00857	Resolvase, N terminal domain
AHML_RS12640	SM00052	Putative diguanylate phosphodiesterase
AHML_RS12640	SM00448	cheY-homologous receiver domain
AHML_RS12650	SM00885	D5 N terminal like
AHML_RS12670	SM00822	AHML_RS12670
AHML_RS12715	SM00878	Biotin carboxylase C-terminal domain
AHML_RS12715	SM01209	AHML_RS12715
AHML_RS12725	SM00422	helix_turn_helix, mercury resistance
AHML_RS12730	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS12795	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS12795	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS12800	SM00479	AHML_RS12800
AHML_RS12815	SM00382	ATPases associated with a variety of cellular activities
AHML_RS12830	SM00382	ATPases associated with a variety of cellular activities
AHML_RS12830	SM00464	Found in ATP-dependent protease La (LON)
AHML_RS12835	SM00382	ATPases associated with a variety of cellular activities
AHML_RS12835	SM00994	ClpX C4-type zinc finger
AHML_RS12835	SM01086	C-terminal, D2-small domain, of ClpB protein
AHML_RS12855	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS12865	SM00382	ATPases associated with a variety of cellular activities
AHML_RS12880	SM00487	DEAD-like helicases superfamily
AHML_RS12880	SM00490	helicase superfamily c-terminal domain
AHML_RS12880	SM00982	AHML_RS12880
AHML_RS12880	SM01058	CarD-like/TRCF domain
AHML_RS12905	SM00855	Phosphoglycerate mutase family
AHML_RS12920	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AHML_RS12930	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS13000	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS13000	SM01240	AHML_RS13000
AHML_RS13035	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS13040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS13040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS13060	SM00893	Electron transfer flavoprotein domain
AHML_RS13065	SM00893	Electron transfer flavoprotein domain
AHML_RS13110	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13130	SM00823	Phosphopantetheine attachment site
AHML_RS13135	SM00822	AHML_RS13135
AHML_RS13140	SM00823	Phosphopantetheine attachment site
AHML_RS13210	SM00387	Histidine kinase-like ATPases
AHML_RS13215	SM00493	AHML_RS13215
AHML_RS13225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS13225	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13240	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS13335	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13340	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13390	SM00448	cheY-homologous receiver domain
AHML_RS13400	SM00073	Histidine Phosphotransfer domain
AHML_RS13400	SM00260	Two component signalling adaptor domain
AHML_RS13400	SM00387	Histidine kinase-like ATPases
AHML_RS13400	SM01231	AHML_RS13400
AHML_RS13405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS13410	SM00260	Two component signalling adaptor domain
AHML_RS13415	SM00138	Methyltransferase, chemotaxis proteins 
AHML_RS13420	SM00448	cheY-homologous receiver domain
AHML_RS13425	SM00052	Putative diguanylate phosphodiesterase
AHML_RS13425	SM00448	cheY-homologous receiver domain
AHML_RS13430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS13430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS13435	SM01005	Alanine racemase, C-terminal domain
AHML_RS13440	SM00873	B3/4 domain
AHML_RS13445	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS13560	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS13800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS13835	SM01005	Alanine racemase, C-terminal domain
AHML_RS13845	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13855	SM00382	ATPases associated with a variety of cellular activities
AHML_RS13890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS13895	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS13900	SM00448	cheY-homologous receiver domain
AHML_RS13900	SM00850	LytTr DNA-binding domain
AHML_RS13920	SM00487	DEAD-like helicases superfamily
AHML_RS13920	SM00490	helicase superfamily c-terminal domain
AHML_RS13955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS13955	SM00091	PAS domain
AHML_RS13955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS13990	SM00900	AHML_RS13990
AHML_RS14000	SM00478	endonuclease III
AHML_RS14000	SM00525	AHML_RS14000
AHML_RS14015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS14020	SM00479	AHML_RS14020
AHML_RS14030	SM00487	DEAD-like helicases superfamily
AHML_RS14030	SM00490	helicase superfamily c-terminal domain
AHML_RS14055	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS14055	SM01091	Transporter associated domain
AHML_RS14130	SM00267	diguanylate cyclase
AHML_RS14135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS14215	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHML_RS14225	SM00014	Acid phosphatase homologues
AHML_RS14240	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS14240	SM00871	Bacterial transcription activator, effector binding domain
AHML_RS14265	SM01217	AHML_RS14265
AHML_RS14270	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS14320	SM00052	Putative diguanylate phosphodiesterase
AHML_RS14320	SM00267	diguanylate cyclase
AHML_RS14340	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14345	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS14360	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14370	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS14385	SM00422	helix_turn_helix, mercury resistance
AHML_RS14400	SM01351	AHML_RS14400
AHML_RS14410	SM00487	DEAD-like helicases superfamily
AHML_RS14410	SM00490	helicase superfamily c-terminal domain
AHML_RS14425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS14445	SM00917	LeuA allosteric (dimerisation) domain
AHML_RS14450	SM00851	MGS-like domain
AHML_RS14450	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AHML_RS14455	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AHML_RS14505	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14515	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS14525	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14550	SM00899	AHML_RS14550
AHML_RS14580	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS14585	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS14590	SM00267	diguanylate cyclase
AHML_RS14605	SM00840	AHML_RS14605
AHML_RS14740	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14825	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHML_RS14825	SM00465	GIY-YIG type nucleases (URI domain)
AHML_RS14830	SM00421	helix_turn_helix, Lux Regulon
AHML_RS14830	SM00448	cheY-homologous receiver domain
AHML_RS14850	SM00382	ATPases associated with a variety of cellular activities
AHML_RS14855	SM00849	Metallo-beta-lactamase superfamily
AHML_RS14885	SM00528	Domain in histone-like proteins of HNS family
AHML_RS14915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS14920	SM00873	B3/4 domain
AHML_RS14995	SM00491	AHML_RS14995
AHML_RS15020	SM00098	Alkaline phosphatase homologues
AHML_RS15025	SM00098	Alkaline phosphatase homologues
AHML_RS15050	SM00421	helix_turn_helix, Lux Regulon
AHML_RS15050	SM00448	cheY-homologous receiver domain
AHML_RS15055	SM00387	Histidine kinase-like ATPases
AHML_RS15065	SM00267	diguanylate cyclase
AHML_RS15070	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS15070	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AHML_RS15080	SM00382	ATPases associated with a variety of cellular activities
AHML_RS15110	SM01091	Transporter associated domain
AHML_RS15120	SM00382	ATPases associated with a variety of cellular activities
AHML_RS15185	SM00382	ATPases associated with a variety of cellular activities
AHML_RS15185	SM00448	cheY-homologous receiver domain
AHML_RS15190	SM00091	PAS domain
AHML_RS15190	SM00387	Histidine kinase-like ATPases
AHML_RS15190	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS15195	SM00382	ATPases associated with a variety of cellular activities
AHML_RS15220	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS15220	SM00924	MgtE intracellular N domain
AHML_RS15235	SM00047	Lysozyme subfamily 2
AHML_RS15280	SM00138	Methyltransferase, chemotaxis proteins 
AHML_RS15285	SM00260	Two component signalling adaptor domain
AHML_RS15285	SM00448	cheY-homologous receiver domain
AHML_RS15290	SM00858	AHML_RS15290
AHML_RS15320	SM00363	S4 RNA-binding domain
AHML_RS15325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS15350	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHML_RS15350	SM01134	AHML_RS15350
AHML_RS15385	SM00357	Cold shock protein domain
AHML_RS15395	SM00861	Transketolase, pyrimidine binding domain
AHML_RS15420	SM00487	DEAD-like helicases superfamily
AHML_RS15420	SM00490	helicase superfamily c-terminal domain
AHML_RS15555	SM00363	S4 RNA-binding domain
AHML_RS15575	SM00481	DNA polymerase alpha chain like domain
AHML_RS15625	SM00247	Beta/gamma crystallins
AHML_RS15705	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS15795	SM00448	cheY-homologous receiver domain
AHML_RS15795	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS15810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS15810	SM00387	Histidine kinase-like ATPases
AHML_RS15810	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS15810	SM00448	cheY-homologous receiver domain
AHML_RS15890	SM00028	Tetratricopeptide repeats
AHML_RS15890	SM00448	cheY-homologous receiver domain
AHML_RS15950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS15950	SM00091	PAS domain
AHML_RS15950	SM00267	diguanylate cyclase
AHML_RS15975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHML_RS15995	SM00354	helix_turn _helix lactose operon repressor
AHML_RS16000	SM00640	Glycosyl hydrolases family 32
AHML_RS16020	SM00271	DnaJ molecular chaperone homology domain
AHML_RS16050	SM01131	AHML_RS16050
AHML_RS16065	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16090	SM00528	Domain in histone-like proteins of HNS family
AHML_RS16110	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS16160	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS16160	SM00387	Histidine kinase-like ATPases
AHML_RS16160	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS16160	SM00448	cheY-homologous receiver domain
AHML_RS16160	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
AHML_RS16185	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16250	SM00448	cheY-homologous receiver domain
AHML_RS16250	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS16265	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16270	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16305	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16330	SM00267	diguanylate cyclase
AHML_RS16430	SM00919	Malic enzyme, NAD binding domain
AHML_RS16430	SM01274	AHML_RS16430
AHML_RS16435	SM00387	Histidine kinase-like ATPases
AHML_RS16435	SM00448	cheY-homologous receiver domain
AHML_RS16450	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS16495	SM00387	Histidine kinase-like ATPases
AHML_RS16495	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS16500	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16500	SM00448	cheY-homologous receiver domain
AHML_RS16515	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16525	SM00852	Probable molybdopterin binding domain
AHML_RS16535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS16545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS16545	SM00091	PAS domain
AHML_RS16545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS16595	SM00091	PAS domain
AHML_RS16595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS16595	SM00387	Histidine kinase-like ATPases
AHML_RS16595	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS16595	SM00448	cheY-homologous receiver domain
AHML_RS16615	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16620	SM00382	ATPases associated with a variety of cellular activities
AHML_RS16655	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AHML_RS16655	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AHML_RS16655	SM00493	AHML_RS16655
AHML_RS16700	SM00788	Adenylosuccinate synthetase
AHML_RS16710	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS16720	SM00363	S4 RNA-binding domain
AHML_RS16755	SM00052	Putative diguanylate phosphodiesterase
AHML_RS16765	SM00861	Transketolase, pyrimidine binding domain
AHML_RS16775	SM00731	SprT homologues.
AHML_RS16795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS16805	SM00732	Likely ribonuclease with RNase H fold.
AHML_RS16830	SM00460	Transglutaminase/protease-like homologues
AHML_RS16855	SM00986	Uracil DNA glycosylase superfamily
AHML_RS16855	SM00987	UreE urease accessory protein, C-terminal domain 
AHML_RS16890	SM00937	AHML_RS16890
AHML_RS16915	SM01400	AHML_RS16915
AHML_RS16990	SM00100	Cyclic nucleotide-monophosphate binding domain
AHML_RS16995	SM01022	AHML_RS16995
AHML_RS17005	SM00642	Alpha-amylase domain
AHML_RS17015	SM00890	Domain of unknown function
AHML_RS17030	SM01150	AHML_RS17030
AHML_RS17095	SM00965	Secretin and TonB N terminus short domain
AHML_RS17115	SM00842	Cell division protein FtsA
AHML_RS17130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS17130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS17140	SM00849	Metallo-beta-lactamase superfamily
AHML_RS17180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS17180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS17240	SM01236	AHML_RS17240
AHML_RS17245	SM00822	AHML_RS17245
AHML_RS17255	SM00448	cheY-homologous receiver domain
AHML_RS17255	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS17260	SM00387	Histidine kinase-like ATPases
AHML_RS17260	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS17270	SM01240	AHML_RS17270
AHML_RS17280	SM00841	Elongation factor P, C-terminal
AHML_RS17280	SM01185	AHML_RS17280
AHML_RS17305	SM00267	diguanylate cyclase
AHML_RS17330	SM00267	diguanylate cyclase
AHML_RS17335	SM00357	Cold shock protein domain
AHML_RS17350	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS17365	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS17365	SM01091	Transporter associated domain
AHML_RS17430	SM00936	Penicillin-binding protein 5, C-terminal domain 
AHML_RS17445	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHML_RS17475	SM00422	helix_turn_helix, mercury resistance
AHML_RS17550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS17565	SM00387	Histidine kinase-like ATPases
AHML_RS17565	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS17570	SM00421	helix_turn_helix, Lux Regulon
AHML_RS17570	SM00448	cheY-homologous receiver domain
AHML_RS17580	SM00448	cheY-homologous receiver domain
AHML_RS17580	SM00850	LytTr DNA-binding domain
AHML_RS17610	SM00267	diguanylate cyclase
AHML_RS17620	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS17620	SM00322	K homology RNA-binding domain
AHML_RS17625	SM01387	AHML_RS17625
AHML_RS17645	SM00316	Ribosomal protein S1-like RNA-binding domain
AHML_RS17685	SM00382	ATPases associated with a variety of cellular activities
AHML_RS17695	SM01103	AHML_RS17695
AHML_RS17730	SM00861	Transketolase, pyrimidine binding domain
AHML_RS17750	SM00382	ATPases associated with a variety of cellular activities
AHML_RS17845	SM00052	Putative diguanylate phosphodiesterase
AHML_RS17845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS17845	SM00091	PAS domain
AHML_RS17845	SM00267	diguanylate cyclase
AHML_RS17870	SM00878	Biotin carboxylase C-terminal domain
AHML_RS17895	SM00829	Enoylreductase
AHML_RS17910	SM01266	AHML_RS17910
AHML_RS17940	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AHML_RS17950	SM00870	AHML_RS17950
AHML_RS17960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS17960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS17965	SM00937	AHML_RS17965
AHML_RS18005	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18030	SM00852	Probable molybdopterin binding domain
AHML_RS18040	SM00825	Beta-ketoacyl synthase
AHML_RS18045	SM00822	AHML_RS18045
AHML_RS18055	SM00825	Beta-ketoacyl synthase
AHML_RS18115	SM00563	Phosphate acyltransferases
AHML_RS18140	SM00477	DNA/RNA non-specific endonuclease
AHML_RS18140	SM00892	DNA/RNA non-specific endonuclease
AHML_RS18150	SM01057	Eukaryotic-type carbonic anhydrase
AHML_RS18175	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18190	SM01012	AHML_RS18190
AHML_RS18200	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AHML_RS18230	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AHML_RS18255	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18260	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18310	SM00028	Tetratricopeptide repeats
AHML_RS18315	SM00495	Chitin-binding domain type 3
AHML_RS18315	SM00636	AHML_RS18315
AHML_RS18360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS18360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS18370	SM00357	Cold shock protein domain
AHML_RS18405	SM00479	AHML_RS18405
AHML_RS18440	SM00052	Putative diguanylate phosphodiesterase
AHML_RS18440	SM00091	PAS domain
AHML_RS18440	SM00267	diguanylate cyclase
AHML_RS18470	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18485	SM00450	Rhodanese Homology Domain
AHML_RS18515	SM00052	Putative diguanylate phosphodiesterase
AHML_RS18530	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18540	SM00260	Two component signalling adaptor domain
AHML_RS18540	SM00448	cheY-homologous receiver domain
AHML_RS18545	SM00327	von Willebrand factor (vWF) type A domain
AHML_RS18580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHML_RS18595	SM00448	cheY-homologous receiver domain
AHML_RS18605	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18700	SM00014	Acid phosphatase homologues
AHML_RS18710	SM00448	cheY-homologous receiver domain
AHML_RS18710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS18740	SM00487	DEAD-like helicases superfamily
AHML_RS18740	SM00490	helicase superfamily c-terminal domain
AHML_RS18740	SM00847	Helicase associated domain (HA2)  Add an annotation
AHML_RS18785	SM00450	Rhodanese Homology Domain
AHML_RS18815	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18870	SM00382	ATPases associated with a variety of cellular activities
AHML_RS18890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS18935	SM00244	prohibitin homologues
AHML_RS18945	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS18950	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS19115	SM00344	helix_turn_helix ASNC type
AHML_RS19130	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS19140	SM00829	Enoylreductase
AHML_RS19160	SM00642	Alpha-amylase domain
AHML_RS19165	SM00642	Alpha-amylase domain
AHML_RS19175	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AHML_RS19190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS19190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS19290	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19295	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHML_RS19300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS19300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS19360	SM01152	AHML_RS19360
AHML_RS19380	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19395	SM00487	DEAD-like helicases superfamily
AHML_RS19395	SM00490	helicase superfamily c-terminal domain
AHML_RS19440	SM00411	bacterial (prokaryotic) histone like domain
AHML_RS19455	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS19480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS19480	SM00091	PAS domain
AHML_RS19480	SM00267	diguanylate cyclase
AHML_RS19495	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AHML_RS19500	SM01133	AHML_RS19500
AHML_RS19565	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS19785	SM01091	Transporter associated domain
AHML_RS19840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AHML_RS19850	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19870	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AHML_RS19870	SM00534	ATPase domain of DNA mismatch repair MUTS family
AHML_RS19885	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHML_RS19925	SM00382	ATPases associated with a variety of cellular activities
AHML_RS19945	SM00986	Uracil DNA glycosylase superfamily
AHML_RS19945	SM00987	UreE urease accessory protein, C-terminal domain 
AHML_RS19980	SM00563	Phosphate acyltransferases
AHML_RS20010	SM00271	DnaJ molecular chaperone homology domain
AHML_RS20045	SM00434	DNA Topoisomerase IV
AHML_RS20050	SM00387	Histidine kinase-like ATPases
AHML_RS20050	SM00433	TopoisomeraseII
AHML_RS20120	SM01118	AHML_RS20120
AHML_RS20145	SM00450	Rhodanese Homology Domain
AHML_RS20155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS20185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHML_RS20195	SM00382	ATPases associated with a variety of cellular activities
AHML_RS20205	SM00478	endonuclease III
AHML_RS20205	SM00525	AHML_RS20205
AHML_RS20230	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS20270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS20270	SM00267	diguanylate cyclase
AHML_RS20275	SM01130	AHML_RS20275
AHML_RS20345	SM00382	ATPases associated with a variety of cellular activities
AHML_RS20375	SM00344	helix_turn_helix ASNC type
AHML_RS20380	SM01266	AHML_RS20380
AHML_RS20385	SM00642	Alpha-amylase domain
AHML_RS20395	SM00354	helix_turn _helix lactose operon repressor
AHML_RS20410	SM00870	AHML_RS20410
AHML_RS20425	SM00851	MGS-like domain
AHML_RS20460	SM00260	Two component signalling adaptor domain
AHML_RS20460	SM00448	cheY-homologous receiver domain
AHML_RS20505	SM01207	AHML_RS20505
AHML_RS20510	SM00905	Dihydroneopterin aldolase
AHML_RS20530	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AHML_RS20565	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS20565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS20570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS20580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHML_RS20580	SM00267	diguanylate cyclase
AHML_RS20600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS20600	SM00895	AHML_RS20600
AHML_RS20670	SM00957	SecA DEAD-like domain
AHML_RS20670	SM00958	SecA preprotein cross-linking domain
AHML_RS20685	SM00864	Tubulin/FtsZ family, GTPase domain
AHML_RS20685	SM00865	Tubulin/FtsZ family, C-terminal domain
AHML_RS20690	SM00842	Cell division protein FtsA
AHML_RS20775	SM00749	bacterial OsmY and nodulation domain
AHML_RS20825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHML_RS20830	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHML_RS20905	SM00382	ATPases associated with a variety of cellular activities
AHML_RS20925	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS20930	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21015	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS21045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS21045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS21065	SM00421	helix_turn_helix, Lux Regulon
AHML_RS21075	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS21090	SM00357	Cold shock protein domain
AHML_RS21100	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS21100	SM00267	diguanylate cyclase
AHML_RS21105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS21105	SM00387	Histidine kinase-like ATPases
AHML_RS21105	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS21110	SM00448	cheY-homologous receiver domain
AHML_RS21110	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS21135	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHML_RS21135	SM00091	PAS domain
AHML_RS21135	SM00267	diguanylate cyclase
AHML_RS21190	SM00530	Helix-turn-helix XRE-family like proteins 
AHML_RS21195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHML_RS21195	SM00866	AHML_RS21195
AHML_RS21220	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21230	SM00267	diguanylate cyclase
AHML_RS21245	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS21245	SM00871	Bacterial transcription activator, effector binding domain
AHML_RS21255	SM01060	AHML_RS21255
AHML_RS21280	SM00014	Acid phosphatase homologues
AHML_RS21290	SM00822	AHML_RS21290
AHML_RS21305	SM00091	PAS domain
AHML_RS21320	SM01120	AHML_RS21320
AHML_RS21380	SM00838	Elongation factor G C-terminus
AHML_RS21380	SM00889	Elongation factor G, domain IV
AHML_RS21420	SM01126	AHML_RS21420
AHML_RS21425	SM00663	RNA polymerase I subunit A N-terminus
AHML_RS21450	SM00649	Ribosomal protein L11/L12
AHML_RS21455	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AHML_RS21455	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AHML_RS21510	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS21525	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AHML_RS21525	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AHML_RS21525	SM00493	AHML_RS21525
AHML_RS21545	SM00387	Histidine kinase-like ATPases
AHML_RS21550	SM00448	cheY-homologous receiver domain
AHML_RS21550	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS21580	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21580	SM00448	cheY-homologous receiver domain
AHML_RS21590	SM00387	Histidine kinase-like ATPases
AHML_RS21590	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS21605	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHML_RS21615	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS21620	SM00344	helix_turn_helix ASNC type
AHML_RS21630	SM00849	Metallo-beta-lactamase superfamily
AHML_RS21635	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21635	SM01086	C-terminal, D2-small domain, of ClpB protein
AHML_RS21645	SM00363	S4 RNA-binding domain
AHML_RS21685	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AHML_RS21685	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHML_RS21695	SM00342	helix_turn_helix, arabinose operon control protein
AHML_RS21705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS21705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS21770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS21770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS21780	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21790	SM01038	Beta galactosidase small chain
AHML_RS21795	SM00354	helix_turn _helix lactose operon repressor
AHML_RS21840	SM00464	Found in ATP-dependent protease La (LON)
AHML_RS21845	SM00836	DALR anticodon binding domain
AHML_RS21845	SM01016	Arginyl tRNA synthetase N terminal dom
AHML_RS21860	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21860	SM01086	C-terminal, D2-small domain, of ClpB protein
AHML_RS21895	SM00924	MgtE intracellular N domain
AHML_RS21900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AHML_RS21900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS21900	SM01358	AHML_RS21900
AHML_RS21930	SM00341	Helicase and RNase D C-terminal
AHML_RS21930	SM00487	DEAD-like helicases superfamily
AHML_RS21930	SM00490	helicase superfamily c-terminal domain
AHML_RS21930	SM00956	AHML_RS21930
AHML_RS21965	SM00382	ATPases associated with a variety of cellular activities
AHML_RS21985	SM01230	AHML_RS21985
AHML_RS22030	SM00642	Alpha-amylase domain
AHML_RS22050	SM00448	cheY-homologous receiver domain
AHML_RS22050	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS22055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHML_RS22055	SM00387	Histidine kinase-like ATPases
AHML_RS22055	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS22065	SM00919	Malic enzyme, NAD binding domain
AHML_RS22065	SM01274	AHML_RS22065
AHML_RS22080	SM00487	DEAD-like helicases superfamily
AHML_RS22080	SM00490	helicase superfamily c-terminal domain
AHML_RS22120	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22125	SM00563	Phosphate acyltransferases
AHML_RS22130	SM00563	Phosphate acyltransferases
AHML_RS22155	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS22160	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22190	SM00267	diguanylate cyclase
AHML_RS22195	SM00422	helix_turn_helix, mercury resistance
AHML_RS22265	SM00829	Enoylreductase
AHML_RS22275	SM00052	Putative diguanylate phosphodiesterase
AHML_RS22275	SM00267	diguanylate cyclase
AHML_RS22355	SM00421	helix_turn_helix, Lux Regulon
AHML_RS22365	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHML_RS22365	SM01134	AHML_RS22365
AHML_RS22370	SM00448	cheY-homologous receiver domain
AHML_RS22370	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS22375	SM00387	Histidine kinase-like ATPases
AHML_RS22375	SM00388	His Kinase A (phosphoacceptor) domain
AHML_RS22400	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22440	SM00470	ParB-like nuclease domain
AHML_RS22455	SM01228	AHML_RS22455
AHML_RS22470	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22475	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22510	SM00382	ATPases associated with a variety of cellular activities
AHML_RS22520	SM00062	Bacterial periplasmic substrate-binding proteins
AHML_RS22520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AHML_RS22545	SM00862	Transcriptional regulatory protein, C terminal
AHML_RS22605	SM00344	helix_turn_helix ASNC type
AHML_RS22610	SM01130	AHML_RS22610
