locus-tag	class	description
AHML_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AHML_RS00010	COG0592	DNA-directed DNA polymerase activity
AHML_RS00030	COG2378	regulation of single-species biofilm formation
AHML_RS00035	COG0071	Belongs to the small heat shock protein (HSP20) family
AHML_RS00040	COG0071	Belongs to the small heat shock protein (HSP20) family
AHML_RS00045	COG3977	Valine--pyruvate aminotransferase
AHML_RS00060	COG2814	Major facilitator Superfamily
AHML_RS00065	COG0745	RESPONSE REGULATOR receiver
AHML_RS00070	COG2205	protein histidine kinase activity
AHML_RS00090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHML_RS00095	COG4191	Histidine kinase
AHML_RS00095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS00100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHML_RS00105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS00110	COG1309	transcriptional regulator
AHML_RS00140	COG0469	pyruvate kinase activity
AHML_RS00145	COG2271	Major facilitator Superfamily
AHML_RS00170	COG0561	phosphatase activity
AHML_RS00175	COG2267	carboxylic ester hydrolase activity
AHML_RS00185	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHML_RS00190	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHML_RS00195	COG1758	RNA polymerase activity
AHML_RS00205	COG0859	PFAM glycosyl transferase family 9
AHML_RS00210	COG3642	lipopolysaccharide core region biosynthetic process
AHML_RS00245	COG0589	response to stress
AHML_RS00250	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHML_RS00260	COG1528	Iron-storage protein
AHML_RS00265	COG2081	HI0933 family
AHML_RS00290	COG3550	peptidyl-serine autophosphorylation
AHML_RS00295	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AHML_RS00300	COG1196	nuclear chromosome segregation
AHML_RS00330	COG2223	nitrite transmembrane transporter activity
AHML_RS00350	COG3188	usher protein
AHML_RS00370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS00370	COG2205	protein histidine kinase activity
AHML_RS00380	COG3275	phosphorelay sensor kinase activity
AHML_RS00385	COG3279	Response regulator of the LytR AlgR family
AHML_RS00390	COG2223	nitrite transmembrane transporter activity
AHML_RS00395	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AHML_RS00400	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AHML_RS00415	COG0583	DNA-binding transcription factor activity
AHML_RS00420	COG4206	TonB-dependent receptor
AHML_RS00425	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AHML_RS00465	COG0402	S-adenosylhomocysteine deaminase activity
AHML_RS00470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AHML_RS00480	COG3165	ubiquinone biosynthetic process from chorismate
AHML_RS00485	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AHML_RS00495	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AHML_RS00500	COG0805	protein transport
AHML_RS00505	COG0084	hydrolase, TatD family'
AHML_RS00525	COG0742	ribosomal rna small subunit methyltransferase
AHML_RS00540	COG0248	Ppx GppA phosphatase
AHML_RS00545	COG0513	Belongs to the DEAD box helicase family
AHML_RS00550	COG3118	belongs to the thioredoxin family
AHML_RS00565	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AHML_RS00590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHML_RS00630	COG1609	Transcriptional regulator
AHML_RS00645	COG2188	Transcriptional regulator
AHML_RS00650	COG3604	Transcriptional regulator
AHML_RS00655	COG0426	domain, Protein
AHML_RS00655	COG1773	rubredoxin
AHML_RS00660	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHML_RS00670	COG0348	domain, Protein
AHML_RS00675	COG0814	amino acid
AHML_RS00695	COG0529	Catalyzes the synthesis of activated sulfate
AHML_RS00695	COG2046	Belongs to the sulfate adenylyltransferase family
AHML_RS00710	COG0751	glycine-tRNA ligase activity
AHML_RS00715	COG0752	glycyl-tRNA synthetase alpha subunit
AHML_RS00720	COG2818	Glycosylase
AHML_RS00725	COG1335	isochorismatase
AHML_RS00730	COG2885	chlorophyll binding
AHML_RS00735	COG0251	oxidation-reduction process
AHML_RS00740	COG0425	Belongs to the sulfur carrier protein TusA family
AHML_RS00765	COG0183	Belongs to the thiolase family
AHML_RS00770	COG1024	Enoyl-CoA hydratase
AHML_RS00770	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHML_RS00775	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHML_RS00780	COG0006	proline dipeptidase activity
AHML_RS00785	COG1739	Uncharacterized protein family UPF0029
AHML_RS00790	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHML_RS00795	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AHML_RS00835	COG0583	DNA-binding transcription factor activity
AHML_RS00840	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AHML_RS00845	COG0166	Belongs to the GPI family
AHML_RS00855	COG0668	transmembrane transport
AHML_RS00860	COG1309	transcriptional regulator
AHML_RS00865	COG0756	dUTP diphosphatase activity
AHML_RS00870	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AHML_RS00875	COG2003	Belongs to the UPF0758 family
AHML_RS00880	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AHML_RS00890	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AHML_RS00895	COG2990	Protein conserved in bacteria
AHML_RS00900	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AHML_RS00905	COG0859	PFAM glycosyl transferase family 9
AHML_RS00910	COG0463	Glycosyl transferase, family 2
AHML_RS00915	COG0859	PFAM glycosyl transferase family 9
AHML_RS00920	COG1519	Transferase
AHML_RS00940	COG1609	Transcriptional regulator
AHML_RS00945	COG0604	alcohol dehydrogenase
AHML_RS00955	COG1580	Controls the rotational direction of flagella during chemotaxis
AHML_RS00960	COG3161	chorismate lyase activity
AHML_RS00965	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AHML_RS00970	COG2937	Belongs to the GPAT DAPAT family
AHML_RS00975	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHML_RS00990	COG0534	Mate efflux family protein
AHML_RS00995	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AHML_RS01000	COG2205	protein histidine kinase activity
AHML_RS01005	COG0745	RESPONSE REGULATOR receiver
AHML_RS01015	COG1045	serine acetyltransferase
AHML_RS01025	COG3074	FtsZ-dependent cytokinesis
AHML_RS01030	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AHML_RS01035	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHML_RS01035	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHML_RS01040	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AHML_RS01080	COG1609	Transcriptional regulator
AHML_RS01085	COG3250	beta-galactosidase activity
AHML_RS01090	COG2731	YhcH YjgK YiaL family protein
AHML_RS01095	COG0531	amino acid
AHML_RS01100	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHML_RS01105	COG0531	amino acid
AHML_RS01110	COG0385	Bile acid
AHML_RS01115	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AHML_RS01135	COG0583	DNA-binding transcription factor activity
AHML_RS01140	COG1079	Belongs to the binding-protein-dependent transport system permease family
AHML_RS01145	COG4603	Belongs to the binding-protein-dependent transport system permease family
AHML_RS01150	COG3845	ABC transporter
AHML_RS01155	COG1744	ABC transporter substrate-binding protein PnrA-like
AHML_RS01160	COG0210	DNA helicase
AHML_RS01165	COG1943	Transposase
AHML_RS01170	COG0583	DNA-binding transcription factor activity
AHML_RS01215	COG1280	lysine exporter protein (LysE YggA)
AHML_RS01220	COG2391	methyltransferase activity
AHML_RS01230	COG1280	lysine exporter protein (LysE YggA)
AHML_RS01240	COG2962	Rard protein
AHML_RS01245	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS01250	COG1396	sequence-specific DNA binding
AHML_RS01255	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AHML_RS01265	COG0519	Catalyzes the synthesis of GMP from XMP
AHML_RS01265	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHML_RS01270	COG0686	Belongs to the AlaDH PNT family
AHML_RS01275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHML_RS01295	COG1322	Protein conserved in bacteria
AHML_RS01300	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHML_RS01305	COG0569	domain protein
AHML_RS01310	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHML_RS01310	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHML_RS01315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHML_RS01320	COG0242	peptide deformylase activity
AHML_RS01330	COG0758	DNA mediated transformation
AHML_RS01335	COG2922	Belongs to the Smg family
AHML_RS01340	COG0551	DNA topoisomerase type I activity
AHML_RS01350	COG0009	L-threonylcarbamoyladenylate synthase
AHML_RS01355	COG0408	coproporphyrinogen oxidase activity
AHML_RS01360	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AHML_RS01370	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AHML_RS01385	COG3078	GTPase activator activity
AHML_RS01395	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHML_RS01400	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHML_RS01405	COG2204	response regulator
AHML_RS01410	COG3852	Histidine kinase
AHML_RS01420	COG0174	glutamine synthetase
AHML_RS01425	COG1217	gtp-binding protein TYPA
AHML_RS01430	COG1295	ribonuclease BN
AHML_RS01435	COG1490	D-aminoacyl-tRNA deacylase activity
AHML_RS01445	COG0456	acetyltransferase
AHML_RS01455	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AHML_RS01460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHML_RS01465	COG2610	gluconate transmembrane transporter activity
AHML_RS01470	COG3265	gluconokinase activity
AHML_RS01475	COG0129	dihydroxy-acid dehydratase activity
AHML_RS01480	COG0800	Aldolase
AHML_RS01485	COG1609	Transcriptional regulator
AHML_RS01495	COG4942	peptidase
AHML_RS01500	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AHML_RS01505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHML_RS01510	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AHML_RS01515	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AHML_RS01520	COG0316	Belongs to the HesB IscA family
AHML_RS01520	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AHML_RS01525	COG1040	competence protein
AHML_RS01530	COG0596	Alpha beta hydrolase
AHML_RS01550	COG2183	response to ionizing radiation
AHML_RS01555	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHML_RS01575	COG0051	transcription antitermination factor activity, RNA binding
AHML_RS01580	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AHML_RS01585	COG0088	Forms part of the polypeptide exit tunnel
AHML_RS01590	COG0089	rRNA binding
AHML_RS01595	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AHML_RS01600	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AHML_RS01605	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AHML_RS01610	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AHML_RS01615	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AHML_RS01620	COG0255	Belongs to the universal ribosomal protein uL29 family
AHML_RS01625	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AHML_RS01630	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AHML_RS01635	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AHML_RS01640	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AHML_RS01645	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AHML_RS01650	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AHML_RS01655	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AHML_RS01660	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AHML_RS01665	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AHML_RS01670	COG0200	Binds to the 23S rRNA
AHML_RS01675	COG0201	protein transport
AHML_RS01680	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AHML_RS01685	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AHML_RS01690	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AHML_RS01695	COG0202	RNA polymerase activity
AHML_RS01745	COG2249	NAD(P)H dehydrogenase (quinone) activity
AHML_RS01750	COG0583	DNA-binding transcription factor activity
AHML_RS01755	COG4221	oxidoreductase activity
AHML_RS01770	COG1770	oligopeptidase
AHML_RS01785	COG3714	YhhN family
AHML_RS01810	COG1301	dicarboxylic acid transport
AHML_RS01820	COG2095	MarC family integral membrane protein
AHML_RS01830	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AHML_RS01840	COG0741	lytic transglycosylase activity
AHML_RS01845	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHML_RS01870	COG0742	ribosomal rna small subunit methyltransferase
AHML_RS01885	COG2884	Cell division ATP-binding protein ftsE
AHML_RS01890	COG2177	Part of the ABC transporter FtsEX involved in
AHML_RS01900	COG0288	reversible hydration of carbon dioxide
AHML_RS01905	COG2188	Transcriptional regulator
AHML_RS01910	COG1228	amidohydrolase
AHML_RS01915	COG0010	Belongs to the arginase family
AHML_RS01920	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AHML_RS01925	COG2986	histidine ammonia-lyase
AHML_RS01930	COG0387	Pfam Sodium calcium exchanger
AHML_RS01935	COG2200	EAL domain
AHML_RS01940	COG2199	diguanylate cyclase activity
AHML_RS01940	COG2200	EAL domain
AHML_RS01975	COG2842	Transposition protein
AHML_RS01985	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHML_RS01990	COG1459	type II secretion system
AHML_RS02000	COG2165	general secretion pathway protein
AHML_RS02005	COG4969	Belongs to the N-Me-Phe pilin family
AHML_RS02010	COG4968	Prepilin-type N-terminal cleavage methylation domain
AHML_RS02035	COG1077	Cell shape determining protein MreB Mrl
AHML_RS02040	COG1792	Involved in formation and maintenance of cell shape
AHML_RS02045	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AHML_RS02050	COG0424	maF-like protein
AHML_RS02055	COG1530	ribonuclease E activity
AHML_RS02060	COG3164	Protein of unknown function
AHML_RS02070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHML_RS02075	COG0312	modulator of DNA gyrase
AHML_RS02095	COG1263	PTS System
AHML_RS02095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS02100	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AHML_RS02115	COG0477	Major facilitator Superfamily
AHML_RS02125	COG3437	response regulator, receiver
AHML_RS02130	COG2205	protein histidine kinase activity
AHML_RS02130	COG0784	Response regulator, receiver
AHML_RS02130	COG5002	protein histidine kinase activity
AHML_RS02135	COG2172	sigma factor antagonist activity
AHML_RS02140	COG1366	Belongs to the anti-sigma-factor antagonist family
AHML_RS02160	COG3700	Belongs to the class B bacterial acid phosphatase family
AHML_RS02165	COG2321	neutral zinc metallopeptidase
AHML_RS02175	COG1639	'signal transduction protein
AHML_RS02225	COG3188	usher protein
AHML_RS02240	COG3171	Protein conserved in bacteria
AHML_RS02280	COG0189	ligase activity
AHML_RS02290	COG0642	Histidine kinase
AHML_RS02295	COG0745	RESPONSE REGULATOR receiver
AHML_RS02315	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AHML_RS02320	COG0352	thiamine-phosphate diphosphorylase activity
AHML_RS02325	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHML_RS02335	COG2022	thiamine diphosphate biosynthetic process
AHML_RS02340	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHML_RS02350	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AHML_RS02365	COG3706	GGDEF domain
AHML_RS02370	COG0814	amino acid
AHML_RS02375	COG3932	Exopolysaccharide synthesis, ExoD
AHML_RS02395	COG1733	regulation of RNA biosynthetic process
AHML_RS02435	COG1494	fructose-1,6-bisphosphatase
AHML_RS02450	COG2959	enzyme of heme biosynthesis
AHML_RS02460	COG0181	hydroxymethylbilane synthase activity
AHML_RS02465	COG3072	Adenylate cyclase
AHML_RS02470	COG0400	carboxylic ester hydrolase activity
AHML_RS02475	COG1965	Belongs to the frataxin family
AHML_RS02480	COG0019	diaminopimelate decarboxylase activity
AHML_RS02485	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AHML_RS02500	COG1011	Hydrolase
AHML_RS02520	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AHML_RS02525	COG0561	phosphatase activity
AHML_RS02540	COG0842	Transport permease protein
AHML_RS02540	COG1129	ABC transporter
AHML_RS02555	COG1546	Belongs to the CinA family
AHML_RS02555	COG1058	Belongs to the CinA family
AHML_RS02560	COG1418	mRNA catabolic process
AHML_RS02565	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AHML_RS02575	COG1522	sequence-specific DNA binding
AHML_RS02580	COG1368	sulfuric ester hydrolase activity
AHML_RS02600	COG1285	pathogenesis
AHML_RS02620	COG4221	oxidoreductase activity
AHML_RS02640	COG1979	alcohol dehydrogenase
AHML_RS02650	COG2873	o-acetylhomoserine
AHML_RS02655	COG4533	DNA binding
AHML_RS02670	COG5380	lipid catabolic process
AHML_RS02675	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AHML_RS02685	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AHML_RS02690	COG2949	membrane
AHML_RS02695	COG3291	Pkd domain containing protein
AHML_RS02705	COG3539	Fimbrial protein
AHML_RS02715	COG3188	usher protein
AHML_RS02720	COG3121	Chaperone
AHML_RS02725	COG3539	Fimbrial protein
AHML_RS02740	COG0318	PFAM AMP-dependent synthetase and ligase
AHML_RS02745	COG1441	menaquinone biosynthetic process
AHML_RS02750	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AHML_RS02755	COG0596	Alpha beta hydrolase
AHML_RS02760	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AHML_RS02765	COG1169	isochorismate synthase
AHML_RS02770	COG1575	Belongs to the MenA family. Type 1 subfamily
AHML_RS02795	COG0513	Belongs to the DEAD box helicase family
AHML_RS02800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHML_RS02805	COG1988	membrane-bound metal-dependent
AHML_RS02820	COG1671	Belongs to the UPF0178 family
AHML_RS02845	COG3263	regulation of cellular component size
AHML_RS02850	COG3722	fumarate hydratase activity
AHML_RS02855	COG0246	Mannitol dehydrogenase
AHML_RS02860	COG2213	PTS system mannitol-specific
AHML_RS02860	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS02870	COG1309	transcriptional regulator
AHML_RS02875	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
AHML_RS02885	COG3916	Acyl-homoserine-lactone synthase
AHML_RS02890	COG2771	luxR family
AHML_RS02905	COG3133	Outer membrane lipoprotein
AHML_RS02910	COG0456	acetyltransferase
AHML_RS02930	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AHML_RS02935	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AHML_RS02945	COG3031	protein transport across the cell outer membrane
AHML_RS02955	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHML_RS02960	COG1459	type II secretion system
AHML_RS02965	COG2165	general secretion pathway protein
AHML_RS02975	COG2165	general secretion pathway protein
AHML_RS02980	COG4795	General secretion pathway protein
AHML_RS02985	COG3156	type II secretion system protein K
AHML_RS02995	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AHML_RS03010	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHML_RS03015	COG1011	Hydrolase
AHML_RS03020	COG0494	nUDIX hydrolase
AHML_RS03025	COG1218	3'(2'),5'-bisphosphate nucleotidase
AHML_RS03030	COG0814	amino acid
AHML_RS03035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHML_RS03040	COG2207	Transcriptional regulator
AHML_RS03040	COG3708	Transcriptional regulator
AHML_RS03050	COG0626	cystathionine gamma-synthase activity
AHML_RS03055	COG0527	aspartate kinase activity
AHML_RS03055	COG0460	homoserine dehydrogenase
AHML_RS03065	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AHML_RS03075	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AHML_RS03080	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHML_RS03090	COG0137	argininosuccinate synthase activity
AHML_RS03095	COG0165	Argininosuccinate lyase
AHML_RS03120	COG0110	maltose O-acetyltransferase activity
AHML_RS03125	COG3174	membrane
AHML_RS03130	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AHML_RS03140	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AHML_RS03145	COG4208	sulfate ABC transporter
AHML_RS03150	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AHML_RS03155	COG0583	DNA-binding transcription factor activity
AHML_RS03160	COG3397	chitin binding
AHML_RS03165	COG0840	transmembrane signaling receptor activity
AHML_RS03195	COG4946	Tricorn protease homolog
AHML_RS03195	COG0793	Belongs to the peptidase S41A family
AHML_RS03215	COG1328	CTP reductase activity
AHML_RS03220	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHML_RS03235	COG1448	Aminotransferase
AHML_RS03275	COG0513	Belongs to the DEAD box helicase family
AHML_RS03295	COG0840	transmembrane signaling receptor activity
AHML_RS03310	COG3112	Uncharacterised protein family (UPF0231)
AHML_RS03315	COG3835	regulator
AHML_RS03320	COG2610	gluconate transmembrane transporter activity
AHML_RS03325	COG1929	Belongs to the glycerate kinase type-1 family
AHML_RS03340	COG0583	DNA-binding transcription factor activity
AHML_RS03345	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHML_RS03360	COG0347	Belongs to the P(II) protein family
AHML_RS03365	COG1840	ABC-type Fe3 transport system, periplasmic component
AHML_RS03375	COG3842	ATPase activity
AHML_RS03380	COG2837	iron assimilation
AHML_RS03385	COG1438	arginine binding
AHML_RS03390	COG1126	abc transporter atp-binding protein
AHML_RS03395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS03400	COG4215	(ABC) transporter
AHML_RS03405	COG4160	amino acid transport
AHML_RS03410	COG0039	L-malate dehydrogenase activity
AHML_RS03415	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AHML_RS03420	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHML_RS03420	COG1017	nitric oxide dioxygenase activity
AHML_RS03430	COG4536	flavin adenine dinucleotide binding
AHML_RS03435	COG4137	Cytochrome C assembly protein
AHML_RS03440	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AHML_RS03445	COG0228	four-way junction DNA binding
AHML_RS03450	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AHML_RS03455	COG0336	Belongs to the RNA methyltransferase TrmD family
AHML_RS03460	COG0335	large ribosomal subunit rRNA binding
AHML_RS03470	COG3066	DNA modification
AHML_RS03475	COG1051	belongs to the nudix hydrolase family
AHML_RS03485	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AHML_RS03490	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AHML_RS03495	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHML_RS03505	COG0583	DNA-binding transcription factor activity
AHML_RS03510	COG0640	Transcriptional regulator
AHML_RS03515	COG0268	Binds directly to 16S ribosomal RNA
AHML_RS03520	COG0728	peptidoglycan biosynthetic process
AHML_RS03525	COG0196	riboflavin kinase activity
AHML_RS03530	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AHML_RS03535	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AHML_RS03540	COG1047	Peptidyl-prolyl cis-trans
AHML_RS03545	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AHML_RS03550	COG4970	Tfp pilus assembly protein FimT
AHML_RS03605	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHML_RS03605	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AHML_RS03620	COG1854	S-ribosylhomocysteine lyase activity
AHML_RS03625	COG3706	GGDEF domain
AHML_RS03630	COG0557	exoribonuclease II activity
AHML_RS03635	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHML_RS03645	COG2153	protein acetylation
AHML_RS03665	COG1914	H( )-stimulated, divalent metal cation uptake system
AHML_RS03670	COG0360	Binds together with S18 to 16S ribosomal RNA
AHML_RS03675	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AHML_RS03680	COG0359	binds to the 23S rRNA
AHML_RS03685	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHML_RS03705	COG1238	metal cluster binding
AHML_RS03710	COG0612	Peptidase, M16
AHML_RS03715	COG2918	glutathione biosynthetic process
AHML_RS03725	COG1022	Amp-dependent synthetase and ligase
AHML_RS03735	COG0456	acetyltransferase
AHML_RS03745	COG0714	Associated with various cellular activities
AHML_RS03790	COG1902	pentaerythritol trinitrate reductase activity
AHML_RS03805	COG2957	Belongs to the agmatine deiminase family
AHML_RS03810	COG0154	amidase activity
AHML_RS03825	COG0513	Belongs to the DEAD box helicase family
AHML_RS03845	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
AHML_RS03850	COG1858	cytochrome C peroxidase
AHML_RS03875	COG2070	2-Nitropropane dioxygenase
AHML_RS03910	COG2205	protein histidine kinase activity
AHML_RS03915	COG0745	RESPONSE REGULATOR receiver
AHML_RS03920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS03925	COG1136	(ABC) transporter
AHML_RS03925	COG0577	efflux transmembrane transporter activity
AHML_RS03930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS03935	COG1126	abc transporter atp-binding protein
AHML_RS03940	COG0765	amino acid transport
AHML_RS03945	COG0765	amino acid transport
AHML_RS03950	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHML_RS03955	COG1505	serine-type exopeptidase activity
AHML_RS03975	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AHML_RS03990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHML_RS03995	COG4991	sh3 domain protein
AHML_RS04010	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AHML_RS04015	COG1940	carbohydrate kinase activity
AHML_RS04020	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHML_RS04025	COG0126	phosphoglycerate kinase activity
AHML_RS04030	COG0191	fructose-bisphosphate aldolase activity
AHML_RS04035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHML_RS04070	COG0354	folic acid binding
AHML_RS04075	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AHML_RS04085	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AHML_RS04090	COG1595	DNA-templated transcription, initiation
AHML_RS04095	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AHML_RS04110	COG0481	GTPase activity
AHML_RS04115	COG0681	Belongs to the peptidase S26 family
AHML_RS04120	COG0571	ribonuclease III activity
AHML_RS04130	COG1381	Involved in DNA repair and RecF pathway recombination
AHML_RS04135	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AHML_RS04150	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHML_RS04155	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS04160	COG3716	PTS system mannose fructose sorbose family IID component
AHML_RS04170	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS04175	COG2222	sugar isomerase
AHML_RS04185	COG1349	DNA-binding transcription factor activity
AHML_RS04190	COG3023	N-Acetylmuramoyl-L-alanine amidase
AHML_RS04195	COG4807	Protein conserved in bacteria
AHML_RS04205	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHML_RS04210	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHML_RS04215	COG3956	TIGRFAM MazG family protein
AHML_RS04220	COG0504	CTP synthase activity
AHML_RS04225	COG0148	phosphopyruvate hydratase activity
AHML_RS04230	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AHML_RS04235	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AHML_RS04245	COG0585	pseudouridine synthase activity
AHML_RS04250	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AHML_RS04255	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AHML_RS04260	COG1238	metal cluster binding
AHML_RS04275	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AHML_RS04280	COG1610	YqeY-like protein
AHML_RS04285	COG0358	DNA primase activity
AHML_RS04290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AHML_RS04320	COG0151	Belongs to the GarS family
AHML_RS04325	COG0138	bifunctional purine biosynthesis protein purh
AHML_RS04335	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AHML_RS04340	COG3036	rescue of stalled ribosome
AHML_RS04345	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHML_RS04350	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AHML_RS04360	COG0673	inositol 2-dehydrogenase activity
AHML_RS04370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHML_RS04390	COG0477	Major facilitator Superfamily
AHML_RS04400	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHML_RS04405	COG1027	Aspartate ammonia-lyase
AHML_RS04410	COG3030	protein affecting phage T7 exclusion by the F plasmid
AHML_RS04415	COG0534	Mate efflux family protein
AHML_RS04420	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AHML_RS04425	COG0459	protein refolding
AHML_RS04435	COG3300	MHYT domain
AHML_RS04435	COG5001	Diguanylate cyclase
AHML_RS04445	COG0564	pseudouridine synthase activity
AHML_RS04450	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHML_RS04480	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHML_RS04490	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AHML_RS04495	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AHML_RS04500	COG1178	ABC-type Fe3 transport system permease component
AHML_RS04520	COG0066	3-isopropylmalate dehydratase activity
AHML_RS04525	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AHML_RS04530	COG0473	3-isopropylmalate dehydrogenase activity
AHML_RS04535	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHML_RS04545	COG0671	phosphoesterase, PA-phosphatase related
AHML_RS04555	COG0028	Belongs to the TPP enzyme family
AHML_RS04565	COG0280	phosphate acetyltransferase
AHML_RS04565	COG0857	belongs to the CobB CobQ family
AHML_RS04570	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AHML_RS04580	COG3013	Belongs to the UPF0304 family
AHML_RS04585	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AHML_RS04590	COG2716	regulation of RNA biosynthetic process
AHML_RS04600	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AHML_RS04605	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AHML_RS04620	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
AHML_RS04640	COG0784	Response regulator, receiver
AHML_RS04640	COG5002	protein histidine kinase activity
AHML_RS04640	COG2198	Histidine kinase
AHML_RS04665	COG0840	transmembrane signaling receptor activity
AHML_RS04675	COG1464	Belongs to the NlpA lipoprotein family
AHML_RS04680	COG2011	ABC-type metal ion transport system permease component
AHML_RS04685	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AHML_RS04710	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AHML_RS04710	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AHML_RS04715	COG0802	atpase or kinase
AHML_RS04725	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AHML_RS04730	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AHML_RS04735	COG1923	regulation of RNA biosynthetic process
AHML_RS04740	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AHML_RS04745	COG0330	HflC and HflK could
AHML_RS04750	COG0330	HflC and HflK could
AHML_RS04755	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AHML_RS04760	COG0142	geranyltranstransferase activity
AHML_RS04770	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AHML_RS04775	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AHML_RS04780	COG3314	Sporulation integral membrane protein YlbJ
AHML_RS04785	COG0318	PFAM AMP-dependent synthetase and ligase
AHML_RS04800	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHML_RS04805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AHML_RS04815	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AHML_RS04820	COG2967	ApaG domain
AHML_RS04825	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AHML_RS04830	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AHML_RS04840	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AHML_RS04850	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AHML_RS04855	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHML_RS04860	COG2252	PERMEase
AHML_RS04870	COG0488	(ABC) transporter
AHML_RS04875	COG0582	viral genome integration into host DNA
AHML_RS05005	COG0464	growth
AHML_RS05045	COG4626	Terminase
AHML_RS05045	COG1802	Transcriptional regulator
AHML_RS05060	COG0616	signal peptide processing
AHML_RS05155	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHML_RS05160	COG0741	lytic transglycosylase activity
AHML_RS05180	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AHML_RS05185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHML_RS05190	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHML_RS05215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHML_RS05225	COG3721	Heme iron utilization protein
AHML_RS05230	COG0748	coenzyme F420 binding
AHML_RS05250	COG4771	TonB-dependent receptor
AHML_RS05255	COG2814	Major facilitator Superfamily
AHML_RS05260	COG3655	Transcriptional regulator
AHML_RS05270	COG2205	protein histidine kinase activity
AHML_RS05270	COG2202	Pas domain
AHML_RS05285	COG3397	chitin binding
AHML_RS05290	COG2226	methyltransferase
AHML_RS05300	COG1765	OsmC-like protein
AHML_RS05315	COG3954	Phosphoribulokinase
AHML_RS05320	COG2076	Multidrug Resistance protein
AHML_RS05325	COG2076	Multidrug Resistance protein
AHML_RS05330	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AHML_RS05335	COG0726	polysaccharide deacetylase
AHML_RS05340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHML_RS05340	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHML_RS05345	COG0463	Glycosyl transferase, family 2
AHML_RS05350	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AHML_RS05360	COG3089	Belongs to the UPF0270 family
AHML_RS05365	COG3706	GGDEF domain
AHML_RS05365	COG5001	Diguanylate cyclase
AHML_RS05365	COG2203	Gaf domain
AHML_RS05365	COG4251	negative regulation of phosphorylation
AHML_RS05370	COG0429	hydrolase of the alpha beta-hydrolase fold
AHML_RS05375	COG0835	chemotaxis
AHML_RS05375	COG0784	Response regulator, receiver
AHML_RS05385	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AHML_RS05390	COG1047	Peptidyl-prolyl cis-trans
AHML_RS05405	COG0545	Peptidyl-prolyl cis-trans isomerase
AHML_RS05410	COG2204	response regulator
AHML_RS05430	COG0737	Belongs to the 5'-nucleotidase family
AHML_RS05435	COG2200	EAL domain
AHML_RS05445	COG0305	Participates in initiation and elongation during chromosome replication
AHML_RS05450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHML_RS05455	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS05460	COG0826	peptidase U32
AHML_RS05465	COG2200	EAL domain
AHML_RS05465	COG2203	Gaf domain
AHML_RS05465	COG2199	diguanylate cyclase activity
AHML_RS05490	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHML_RS05495	COG2201	protein-glutamate methylesterase activity
AHML_RS05500	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AHML_RS05510	COG0840	transmembrane signaling receptor activity
AHML_RS05515	COG0835	chemotaxis
AHML_RS05525	COG0643	Histidine kinase
AHML_RS05525	COG2198	Histidine kinase
AHML_RS05540	COG0840	transmembrane signaling receptor activity
AHML_RS05545	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AHML_RS05555	COG1280	lysine exporter protein (LysE YggA)
AHML_RS05560	COG0826	peptidase U32
AHML_RS05565	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AHML_RS05580	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AHML_RS05600	COG0300	oxidoreductase activity
AHML_RS05610	COG0840	transmembrane signaling receptor activity
AHML_RS05615	COG0697	spore germination
AHML_RS05620	COG2133	pyrroloquinoline quinone binding
AHML_RS05645	COG3328	transposase activity
AHML_RS05650	COG2226	methyltransferase
AHML_RS05660	COG1120	ATPase activity
AHML_RS05665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHML_RS05710	COG4771	TonB-dependent receptor
AHML_RS05735	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHML_RS05740	COG0514	ATP-dependent DNA helicase (RecQ)
AHML_RS05785	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AHML_RS05790	COG0602	queuosine metabolic process
AHML_RS05800	COG2003	Belongs to the UPF0758 family
AHML_RS05840	COG5377	YqaJ viral recombinase family
AHML_RS05870	COG0077	Prephenate dehydratase
AHML_RS05870	COG1605	Chorismate mutase
AHML_RS05900	COG3272	Protein of unknown function (DUF1722)
AHML_RS05905	COG0789	Transcriptional regulator
AHML_RS05910	COG0415	Belongs to the DNA photolyase family
AHML_RS05920	COG4221	oxidoreductase activity
AHML_RS05935	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AHML_RS05960	COG0783	Belongs to the Dps family
AHML_RS05965	COG1151	hydroxylamine reductase activity
AHML_RS05975	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHML_RS05980	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHML_RS05980	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHML_RS05990	COG2771	luxR family
AHML_RS06035	COG0693	protein deglycase activity
AHML_RS06040	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AHML_RS06045	COG1666	GTP binding
AHML_RS06050	COG3248	Nucleoside-binding outer membrane protein
AHML_RS06055	COG2211	Major facilitator Superfamily
AHML_RS06065	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHML_RS06075	COG2813	Specifically methylates the guanine in position
AHML_RS06080	COG0271	Belongs to the BolA IbaG family
AHML_RS06085	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHML_RS06090	COG1805	sodium ion transport
AHML_RS06095	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHML_RS06100	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHML_RS06105	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHML_RS06110	COG2871	sodium ion transport
AHML_RS06115	COG1477	protein flavinylation
AHML_RS06130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHML_RS06135	COG0840	transmembrane signaling receptor activity
AHML_RS06140	COG0583	DNA-binding transcription factor activity
AHML_RS06150	COG2363	Small membrane protein
AHML_RS06155	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
AHML_RS06165	COG0473	3-isopropylmalate dehydrogenase activity
AHML_RS06170	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHML_RS06175	COG1611	Belongs to the LOG family
AHML_RS06190	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHML_RS06190	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHML_RS06200	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
AHML_RS06225	COG3098	single-species biofilm formation
AHML_RS06230	COG0564	pseudouridine synthase activity
AHML_RS06240	COG4580	involved in the transport of maltose and maltodextrins
AHML_RS06250	COG1263	PTS System
AHML_RS06250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS06260	COG2171	N-acyltransferase activity
AHML_RS06265	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AHML_RS06270	COG0024	Methionine aminopeptidase
AHML_RS06275	COG0052	Belongs to the universal ribosomal protein uS2 family
AHML_RS06280	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AHML_RS06285	COG0528	UMP kinase activity
AHML_RS06290	COG0233	cytoplasmic translational termination
AHML_RS06295	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AHML_RS06300	COG0575	Belongs to the CDS family
AHML_RS06305	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AHML_RS06310	COG0750	zinc metalloprotease
AHML_RS06325	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHML_RS06330	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHML_RS06335	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHML_RS06340	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHML_RS06345	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AHML_RS06355	COG0825	malonyl-CoA metabolic process
AHML_RS06360	COG3710	Transcriptional regulator
AHML_RS06365	COG0531	amino acid
AHML_RS06370	COG1982	Orn Lys Arg decarboxylase major
AHML_RS06375	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHML_RS06390	COG0814	amino acid
AHML_RS06405	COG0531	amino acid
AHML_RS06415	COG0488	(ABC) transporter
AHML_RS06425	COG3590	peptidase
AHML_RS06430	COG0037	tRNA processing
AHML_RS06435	COG3706	GGDEF domain
AHML_RS06470	COG0366	Alpha amylase catalytic
AHML_RS06485	COG0463	Glycosyl transferase, family 2
AHML_RS06500	COG2989	Protein conserved in bacteria
AHML_RS06505	COG3108	Peptidase M15
AHML_RS06515	COG2860	membrane
AHML_RS06525	COG1196	nuclear chromosome segregation
AHML_RS06530	COG3115	cell septum assembly
AHML_RS06535	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AHML_RS06545	COG1328	CTP reductase activity
AHML_RS06550	COG0602	queuosine metabolic process
AHML_RS06580	COG1566	PFAM secretion protein HlyD family protein
AHML_RS06585	COG1846	Transcriptional regulator
AHML_RS06595	COG0281	malic enzyme
AHML_RS06600	COG3290	protein histidine kinase activity
AHML_RS06605	COG4565	transcriptional regulatory protein
AHML_RS06610	COG0697	spore germination
AHML_RS06625	COG3284	Transcriptional regulator
AHML_RS06630	COG1960	acyl-CoA dehydrogenase activity
AHML_RS06635	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AHML_RS06640	COG0346	lactoylglutathione lyase activity
AHML_RS06645	COG0745	RESPONSE REGULATOR receiver
AHML_RS06650	COG5002	protein histidine kinase activity
AHML_RS06675	COG3142	Participates in the control of copper homeostasis
AHML_RS06680	COG0545	Peptidyl-prolyl cis-trans isomerase
AHML_RS06685	COG1131	(ABC) transporter
AHML_RS06705	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AHML_RS06715	COG0678	peroxiredoxin activity
AHML_RS06725	COG0019	diaminopimelate decarboxylase activity
AHML_RS06730	COG1115	amino acid carrier protein
AHML_RS06735	COG0095	Lipoate-protein ligase
AHML_RS06740	COG2233	PERMEase
AHML_RS06755	COG0534	Mate efflux family protein
AHML_RS06765	COG0281	malic enzyme
AHML_RS06795	COG0733	neurotransmitter:sodium symporter activity
AHML_RS06800	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHML_RS06810	COG1566	PFAM secretion protein HlyD family protein
AHML_RS06815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHML_RS06825	COG1032	radical SAM domain protein
AHML_RS06845	COG0673	inositol 2-dehydrogenase activity
AHML_RS06855	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AHML_RS06860	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHML_RS06865	COG0739	heme binding
AHML_RS06865	COG1196	nuclear chromosome segregation
AHML_RS06865	COG0741	lytic transglycosylase activity
AHML_RS06870	COG0366	Alpha amylase catalytic
AHML_RS06890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHML_RS06900	COG0788	formyltetrahydrofolate deformylase activity
AHML_RS06905	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHML_RS06915	COG3118	belongs to the thioredoxin family
AHML_RS06920	COG2091	lysine biosynthetic process via aminoadipic acid
AHML_RS06925	COG0791	NLP P60 protein
AHML_RS06930	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AHML_RS06945	COG1376	ErfK ybiS ycfS ynhG family protein
AHML_RS06945	COG1388	LysM domain
AHML_RS06955	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHML_RS07015	COG2003	Belongs to the UPF0758 family
AHML_RS07085	COG3311	Transcriptional regulator
AHML_RS07095	COG0582	viral genome integration into host DNA
AHML_RS07100	COG0747	negative chemotaxis
AHML_RS07110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHML_RS07115	COG4172	Belongs to the ABC transporter superfamily
AHML_RS07135	COG1070	Carbohydrate kinase
AHML_RS07145	COG0738	Major facilitator superfamily
AHML_RS07150	COG1349	DNA-binding transcription factor activity
AHML_RS07155	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AHML_RS07160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AHML_RS07165	COG1737	Transcriptional regulator
AHML_RS07170	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
AHML_RS07180	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHML_RS07185	COG2731	YhcH YjgK YiaL family protein
AHML_RS07230	COG4869	propanediol catabolic process
AHML_RS07240	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHML_RS07245	COG1882	Formate acetyltransferase
AHML_RS07250	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS07250	COG1454	alcohol dehydrogenase
AHML_RS07260	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS07260	COG1454	alcohol dehydrogenase
AHML_RS07295	COG0583	DNA-binding transcription factor activity
AHML_RS07300	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AHML_RS07305	COG0243	molybdopterin cofactor binding
AHML_RS07315	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AHML_RS07325	COG1960	acyl-CoA dehydrogenase activity
AHML_RS07330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHML_RS07340	COG0469	pyruvate kinase activity
AHML_RS07345	COG1737	Transcriptional regulator
AHML_RS07365	COG2274	protein secretion by the type I secretion system
AHML_RS07375	COG2274	protein secretion by the type I secretion system
AHML_RS07390	COG3064	Membrane
AHML_RS07390	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
AHML_RS07390	COG1073	alpha beta
AHML_RS07400	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHML_RS07415	COG1677	Flagellar hook-basal body complex protein FliE
AHML_RS07425	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AHML_RS07480	COG1684	flagellar biosynthetic protein fliR
AHML_RS07490	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AHML_RS07515	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AHML_RS07520	COG0784	Response regulator, receiver
AHML_RS07520	COG0643	Histidine kinase
AHML_RS07520	COG2198	Histidine kinase
AHML_RS07525	COG2201	protein-glutamate methylesterase activity
AHML_RS07530	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHML_RS07535	COG1360	Flagellar Motor Protein
AHML_RS07540	COG1192	Involved in chromosome partitioning
AHML_RS07550	COG0835	chemotaxis
AHML_RS07565	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHML_RS07570	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHML_RS07575	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHML_RS07580	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AHML_RS07585	COG1138	Cytochrome C-type biogenesis protein
AHML_RS07590	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHML_RS07595	COG3088	subunit of a heme lyase
AHML_RS07595	COG4235	cytochrome complex assembly
AHML_RS07600	COG4235	cytochrome complex assembly
AHML_RS07600	COG3088	subunit of a heme lyase
AHML_RS07615	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AHML_RS07620	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHML_RS07620	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHML_RS07635	COG0259	pyridoxamine-phosphate oxidase activity
AHML_RS07640	COG0625	glutathione transferase activity
AHML_RS07650	COG3153	acetyltransferase
AHML_RS07660	COG2850	peptidyl-arginine hydroxylation
AHML_RS07665	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AHML_RS07670	COG2915	High frequency lysogenization protein hflD homolog
AHML_RS07675	COG0482	sulfurtransferase activity
AHML_RS07685	COG1187	pseudouridine synthase activity
AHML_RS07695	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS07705	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS07705	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS07705	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS07725	COG0456	acetyltransferase
AHML_RS07740	COG1609	Transcriptional regulator
AHML_RS07745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS07745	COG1263	PTS System
AHML_RS07750	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHML_RS07760	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS07775	COG2207	Transcriptional regulator
AHML_RS07780	COG0538	isocitrate dehydrogenase activity
AHML_RS07785	COG3048	D-serine ammonia-lyase activity
AHML_RS07790	COG2610	gluconate transmembrane transporter activity
AHML_RS07795	COG0583	DNA-binding transcription factor activity
AHML_RS07900	COG5566	PFAM Mor transcription activator
AHML_RS07940	COG0640	Transcriptional regulator
AHML_RS07950	COG4373	Mu-like prophage FluMu protein gp28
AHML_RS07955	COG4383	Mu-like prophage protein gp29
AHML_RS07975	COG4388	Caudovirus prohead serine protease
AHML_RS07980	COG4397	Mu-like prophage major head subunit gpT
AHML_RS08060	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AHML_RS08065	COG2867	negative regulation of translational initiation
AHML_RS08070	COG2914	Belongs to the UPF0125 (RnfH) family
AHML_RS08075	COG0702	epimerase
AHML_RS08080	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHML_RS08110	COG4964	Belongs to the GSP D family
AHML_RS08160	COG1454	alcohol dehydrogenase
AHML_RS08170	COG0564	pseudouridine synthase activity
AHML_RS08175	COG1957	nucleoside hydrolase
AHML_RS08200	COG1280	lysine exporter protein (LysE YggA)
AHML_RS08220	COG3263	regulation of cellular component size
AHML_RS08225	COG1876	peptidase activity
AHML_RS08230	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHML_RS08235	COG1393	Belongs to the ArsC family
AHML_RS08240	COG0583	DNA-binding transcription factor activity
AHML_RS08250	COG3069	C4-dicarboxylate transmembrane transporter activity
AHML_RS08265	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHML_RS08270	COG0017	Asparaginyl-tRNA synthetase
AHML_RS08290	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHML_RS08295	COG0156	8-amino-7-oxononanoate synthase activity
AHML_RS08300	COG1073	alpha beta
AHML_RS08300	COG2226	methyltransferase
AHML_RS08305	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AHML_RS08310	COG0501	Belongs to the peptidase M48B family
AHML_RS08320	COG0633	Ferredoxin
AHML_RS08320	COG3217	Mosc domain protein beta barrel domain protein
AHML_RS08320	COG0633	Ferredoxin
AHML_RS08320	COG3217	Mosc domain protein beta barrel domain protein
AHML_RS08330	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHML_RS08330	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHML_RS08330	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AHML_RS08330	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHML_RS08335	COG2366	antibiotic biosynthetic process
AHML_RS08355	COG0534	Mate efflux family protein
AHML_RS08395	COG1309	transcriptional regulator
AHML_RS08410	COG0791	NLP P60 protein
AHML_RS08420	COG0583	DNA-binding transcription factor activity
AHML_RS08425	COG0450	alkyl hydroperoxide reductase
AHML_RS08445	COG0500	methyltransferase
AHML_RS08450	COG4106	trans-aconitate 2-methyltransferase activity
AHML_RS08455	COG1801	Protein of unknown function DUF72
AHML_RS08460	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AHML_RS08465	COG0217	transcriptional regulatory protein
AHML_RS08470	COG2194	sulfuric ester hydrolase activity
AHML_RS08475	COG1846	Transcriptional regulator
AHML_RS08475	COG1940	carbohydrate kinase activity
AHML_RS08480	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHML_RS08485	COG0363	glucosamine-6-phosphate deaminase activity
AHML_RS08490	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS08490	COG2190	(PTS) system
AHML_RS08490	COG1263	PTS System
AHML_RS08500	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHML_RS08505	COG0735	belongs to the Fur family
AHML_RS08515	COG0716	FMN binding
AHML_RS08530	COG0596	Alpha beta hydrolase
AHML_RS08535	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AHML_RS08540	COG0033	Phosphoglucomutase
AHML_RS08550	COG1846	Transcriptional regulator
AHML_RS08555	COG2951	lytic endotransglycosylase activity
AHML_RS08560	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AHML_RS08565	COG4136	ATPase activity
AHML_RS08575	COG4134	Bacterial extracellular solute-binding protein
AHML_RS08585	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AHML_RS08595	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHML_RS08600	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHML_RS08610	COG0729	surface antigen
AHML_RS08635	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AHML_RS08645	COG0741	lytic transglycosylase activity
AHML_RS08660	COG1607	acyl-coa hydrolase
AHML_RS08670	COG3021	interspecies interaction between organisms
AHML_RS08675	COG1388	LysM domain
AHML_RS08675	COG0741	lytic transglycosylase activity
AHML_RS08680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHML_RS08685	COG2226	methyltransferase
AHML_RS08690	COG0328	RNA-DNA hybrid ribonuclease activity
AHML_RS08705	COG3437	response regulator, receiver
AHML_RS08705	COG0784	Response regulator, receiver
AHML_RS08710	COG1960	acyl-CoA dehydrogenase activity
AHML_RS08715	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHML_RS08720	COG0121	glutamine amidotransferase
AHML_RS08750	COG2197	response regulator
AHML_RS08755	COG3850	Histidine kinase
AHML_RS08760	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AHML_RS08765	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS08765	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS08775	COG0243	molybdopterin cofactor binding
AHML_RS08780	COG0437	4 iron, 4 sulfur cluster binding
AHML_RS08785	COG0348	domain, Protein
AHML_RS08795	COG3005	denitrification pathway
AHML_RS08800	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHML_RS08805	COG0315	cyclic pyranopterin monophosphate synthase activity
AHML_RS08810	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AHML_RS08815	COG0314	molybdopterin synthase activity
AHML_RS08830	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AHML_RS08835	COG2267	carboxylic ester hydrolase activity
AHML_RS08840	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHML_RS08850	COG0302	gtp cyclohydrolase
AHML_RS08855	COG0840	transmembrane signaling receptor activity
AHML_RS08860	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AHML_RS08870	COG0583	DNA-binding transcription factor activity
AHML_RS08900	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHML_RS08905	COG1166	arginine decarboxylase activity
AHML_RS08925	COG0814	amino acid
AHML_RS08935	COG3681	Belongs to the UPF0597 family
AHML_RS08940	COG2964	Protein conserved in bacteria
AHML_RS08950	COG1061	Type III restriction enzyme res subunit
AHML_RS08975	COG1187	pseudouridine synthase activity
AHML_RS08980	COG2807	transmembrane transport
AHML_RS08990	COG0583	DNA-binding transcription factor activity
AHML_RS08995	COG2271	Major facilitator Superfamily
AHML_RS09015	COG2979	Protein of unknown function (DUF533)
AHML_RS09025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHML_RS09035	COG1294	oxidase, subunit
AHML_RS09045	COG2814	Major facilitator Superfamily
AHML_RS09050	COG0656	L-ascorbic acid biosynthetic process
AHML_RS09070	COG0583	DNA-binding transcription factor activity
AHML_RS09075	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AHML_RS09080	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHML_RS09085	COG2271	Major facilitator Superfamily
AHML_RS09090	COG1349	DNA-binding transcription factor activity
AHML_RS09100	COG0584	glycerophosphoryl diester phosphodiesterase
AHML_RS09105	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHML_RS09110	COG1605	Chorismate mutase
AHML_RS09110	COG0287	Prephenate dehydrogenase
AHML_RS09115	COG0583	DNA-binding transcription factor activity
AHML_RS09120	COG3085	chromosome segregation
AHML_RS09125	COG4574	serine-type endopeptidase inhibitor activity
AHML_RS09145	COG1770	oligopeptidase
AHML_RS09150	COG4771	TonB-dependent receptor
AHML_RS09155	COG3083	sulfuric ester hydrolase activity
AHML_RS09160	COG3082	Protein of unknown function (DUF1414)
AHML_RS09165	COG3081	Nucleoid-associated protein
AHML_RS09175	COG1175	transmembrane transport
AHML_RS09180	COG3833	ABC-type maltose transport systems, permease component
AHML_RS09185	COG3842	ATPase activity
AHML_RS09210	COG0425	Belongs to the sulfur carrier protein TusA family
AHML_RS09215	COG4783	chaperone-mediated protein folding
AHML_RS09225	COG1393	Belongs to the ArsC family
AHML_RS09240	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
AHML_RS09245	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHML_RS09250	COG2431	L-lysine efflux transmembrane transporter activity
AHML_RS09260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS09280	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHML_RS09290	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHML_RS09310	COG1538	Outer membrane efflux protein
AHML_RS09315	COG0628	permease
AHML_RS09325	COG2373	Large extracellular alpha-helical protein
AHML_RS09330	COG4953	penicillin-binding protein 1C
AHML_RS09340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHML_RS09340	COG0301	tRNA thio-modification
AHML_RS09375	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AHML_RS09410	COG2089	acid synthase
AHML_RS09420	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AHML_RS09440	COG1086	Polysaccharide biosynthesis protein
AHML_RS09455	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHML_RS09475	COG0483	inositol monophosphate 1-phosphatase activity
AHML_RS09485	COG0625	glutathione transferase activity
AHML_RS09490	COG2814	Major facilitator Superfamily
AHML_RS09505	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHML_RS09510	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHML_RS09515	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AHML_RS09520	COG0509	glycine decarboxylation via glycine cleavage system
AHML_RS09525	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHML_RS09525	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHML_RS09530	COG0640	Transcriptional regulator
AHML_RS09535	COG0798	PFAM Bile acid sodium symporter
AHML_RS09540	COG1393	Belongs to the ArsC family
AHML_RS09560	COG3634	alkyl hydroperoxide reductase activity
AHML_RS09570	COG0517	IMP dehydrogenase activity
AHML_RS09575	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AHML_RS09580	COG0343	queuine tRNA-ribosyltransferase activity
AHML_RS09585	COG1862	Preprotein translocase
AHML_RS09590	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHML_RS09595	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHML_RS09610	COG0826	peptidase U32
AHML_RS09615	COG0826	peptidase U32
AHML_RS09620	COG3154	lipid carrier protein
AHML_RS09640	COG1104	cysteine desulfurase activity
AHML_RS09645	COG0822	iron-sulfur transferase activity
AHML_RS09655	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHML_RS09660	COG0443	Heat shock 70 kDa protein
AHML_RS09665	COG0633	Ferredoxin
AHML_RS09675	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHML_RS09680	COG0105	UTP biosynthetic process
AHML_RS09685	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AHML_RS09700	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AHML_RS09705	COG0124	histidyl-tRNA synthetase
AHML_RS09710	COG2976	Protein conserved in bacteria
AHML_RS09715	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHML_RS09720	COG1160	GTP binding
AHML_RS09725	COG1645	bacterial-type flagellum-dependent swarming motility
AHML_RS09730	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHML_RS09735	COG0047	phosphoribosylformylglycinamidine synthase activity
AHML_RS09735	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AHML_RS09745	COG1007	ATP synthesis coupled electron transport
AHML_RS09750	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS09760	COG0713	ATP synthesis coupled electron transport
AHML_RS09765	COG0839	Belongs to the complex I subunit 6 family
AHML_RS09770	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS09775	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AHML_RS09780	COG1034	ATP synthesis coupled electron transport
AHML_RS09795	COG0649	NAD binding
AHML_RS09795	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS09800	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS09805	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS09810	COG1360	Flagellar Motor Protein
AHML_RS09815	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHML_RS09830	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AHML_RS09850	COG0724	RNA recognition motif
AHML_RS09855	COG4989	oxidoreductase activity
AHML_RS09880	COG3437	response regulator, receiver
AHML_RS09885	COG0583	DNA-binding transcription factor activity
AHML_RS09895	COG5001	Diguanylate cyclase
AHML_RS09895	COG3300	MHYT domain
AHML_RS09900	COG0778	Nitroreductase
AHML_RS09920	COG0583	DNA-binding transcription factor activity
AHML_RS09930	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHML_RS09935	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AHML_RS09940	COG0539	negative regulation of cytoplasmic translation
AHML_RS09945	COG0776	regulation of translation
AHML_RS09955	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AHML_RS09975	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AHML_RS09980	COG0602	queuosine metabolic process
AHML_RS09985	COG3530	Putative quorum-sensing-regulated virulence factor
AHML_RS09990	COG2096	Adenosyltransferase
AHML_RS09995	COG2916	Histone family protein nucleoid-structuring protein H-NS
AHML_RS10000	COG1757	Na H antiporter
AHML_RS10005	COG1435	thymidine kinase activity
AHML_RS10060	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AHML_RS10065	COG1278	Cold shock
AHML_RS10070	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AHML_RS10075	COG0542	response to heat
AHML_RS10080	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AHML_RS10085	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AHML_RS10090	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AHML_RS10095	COG3134	Outer membrane lipoprotein
AHML_RS10100	COG3706	GGDEF domain
AHML_RS10105	COG0492	ferredoxin-NADP+ reductase activity
AHML_RS10115	COG0531	amino acid
AHML_RS10115	COG1674	ftsk spoiiie
AHML_RS10120	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AHML_RS10125	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AHML_RS10135	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AHML_RS10140	COG1286	toxin biosynthetic process
AHML_RS10145	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AHML_RS10155	COG4172	Belongs to the ABC transporter superfamily
AHML_RS10165	COG4171	peptide transport system, permease
AHML_RS10170	COG4168	peptide transport system, permease
AHML_RS10180	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AHML_RS10185	COG1842	Phage shock protein A
AHML_RS10200	COG3106	COG3106 Predicted ATPase
AHML_RS10205	COG3768	UPF0283 membrane protein
AHML_RS10215	COG2154	pterin-4-alpha-carbinolamine dehydratase
AHML_RS10220	COG2154	pterin-4-alpha-carbinolamine dehydratase
AHML_RS10235	COG2199	diguanylate cyclase activity
AHML_RS10240	COG2885	chlorophyll binding
AHML_RS10245	COG0861	Integral membrane protein TerC family
AHML_RS10260	COG1022	Amp-dependent synthetase and ligase
AHML_RS10265	COG0295	cytidine deaminase activity
AHML_RS10270	COG1346	cytolysis
AHML_RS10275	COG1380	Effector of murein hydrolase LrgA
AHML_RS10280	COG3345	alpha-galactosidase
AHML_RS10290	COG2925	Exonuclease
AHML_RS10295	COG2160	L-arabinose isomerase activity
AHML_RS10305	COG1069	ribulokinase activity
AHML_RS10310	COG1879	ABC-type sugar transport system periplasmic component
AHML_RS10320	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHML_RS10330	COG0583	DNA-binding transcription factor activity
AHML_RS10340	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AHML_RS10345	COG0254	rRNA binding
AHML_RS10360	COG1451	nucleotide metabolic process
AHML_RS10375	COG3069	C4-dicarboxylate transmembrane transporter activity
AHML_RS10385	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHML_RS10385	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AHML_RS10390	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHML_RS10415	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AHML_RS10420	COG1053	succinate dehydrogenase
AHML_RS10430	COG0567	Dehydrogenase, E1 component
AHML_RS10435	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHML_RS10440	COG0045	succinate-CoA ligase (ADP-forming) activity
AHML_RS10445	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AHML_RS10455	COG2983	Belongs to the UPF0260 family
AHML_RS10460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHML_RS10470	COG3842	ATPase activity
AHML_RS10475	COG1840	ABC-type Fe3 transport system, periplasmic component
AHML_RS10485	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AHML_RS10495	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHML_RS10500	COG1882	Formate acetyltransferase
AHML_RS10505	COG2116	formate transmembrane transporter activity
AHML_RS10510	COG1944	ATP diphosphatase activity
AHML_RS10520	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHML_RS10525	COG0612	Peptidase, M16
AHML_RS10530	COG0626	cystathionine gamma-synthase activity
AHML_RS10540	COG2910	NAD(P)H-binding
AHML_RS10545	COG0583	DNA-binding transcription factor activity
AHML_RS10555	COG4977	sequence-specific DNA binding
AHML_RS10560	COG4774	siderophore transport
AHML_RS10570	COG0583	DNA-binding transcription factor activity
AHML_RS10575	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AHML_RS10600	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHML_RS10605	COG3046	protein related to deoxyribodipyrimidine photolyase
AHML_RS10610	COG3033	Beta-eliminating lyase
AHML_RS10620	COG1051	belongs to the nudix hydrolase family
AHML_RS10625	COG4235	cytochrome complex assembly
AHML_RS10625	COG3088	subunit of a heme lyase
AHML_RS10635	COG1138	Cytochrome C-type biogenesis protein
AHML_RS10640	COG3301	Polysulphide reductase, NrfD
AHML_RS10645	COG0437	4 iron, 4 sulfur cluster binding
AHML_RS10650	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHML_RS10670	COG0247	lactate metabolic process
AHML_RS10675	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
AHML_RS10680	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AHML_RS10685	COG3012	SEC-C Motif Domain Protein
AHML_RS10690	COG0840	transmembrane signaling receptor activity
AHML_RS10695	COG1846	Transcriptional regulator
AHML_RS10695	COG1940	carbohydrate kinase activity
AHML_RS10700	COG3290	protein histidine kinase activity
AHML_RS10705	COG4565	transcriptional regulatory protein
AHML_RS10725	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHML_RS10730	COG0569	domain protein
AHML_RS10730	COG2985	domain, Protein
AHML_RS10740	COG0556	nucleotide-excision repair
AHML_RS10750	COG0586	Pfam SNARE associated Golgi protein
AHML_RS10755	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AHML_RS10760	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHML_RS10765	COG2186	Transcriptional regulator
AHML_RS10770	COG2719	SpoVR family
AHML_RS10780	COG2766	serine protein kinase
AHML_RS10785	COG0514	ATP-dependent DNA helicase (RecQ)
AHML_RS10790	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AHML_RS10795	COG0814	amino acid
AHML_RS10830	COG0058	SHG alpha-glucan phosphorylase activity
AHML_RS10835	COG0471	metal ion transport
AHML_RS10840	COG3118	belongs to the thioredoxin family
AHML_RS10850	COG1132	(ABC) transporter
AHML_RS10855	COG1132	(ABC) transporter
AHML_RS10865	COG2501	S4 domain
AHML_RS10875	COG3243	poly(R)-hydroxyalkanoic acid synthase
AHML_RS10895	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHML_RS10900	COG2329	Antibiotic biosynthesis monooxygenase
AHML_RS10930	COG1742	UPF0060 membrane protein
AHML_RS10940	COG0456	acetyltransferase
AHML_RS10945	COG0513	Belongs to the DEAD box helicase family
AHML_RS10950	COG0386	Belongs to the glutathione peroxidase family
AHML_RS10960	COG1181	Belongs to the D-alanine--D-alanine ligase family
AHML_RS10970	COG3148	PFAM DTW domain containing protein
AHML_RS10975	COG0730	response to heat
AHML_RS10980	COG0583	DNA-binding transcription factor activity
AHML_RS10995	COG3593	DNA synthesis involved in DNA repair
AHML_RS11040	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHML_RS11045	COG1011	Hydrolase
AHML_RS11050	COG1473	amidohydrolase
AHML_RS11055	COG0205	6-phosphofructokinase activity
AHML_RS11065	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AHML_RS11070	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHML_RS11080	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AHML_RS11085	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AHML_RS11105	COG0242	peptide deformylase activity
AHML_RS11120	COG0384	phenazine biosynthesis protein PhzF
AHML_RS11135	COG2824	Alkylphosphonate utilization operon protein PhnA
AHML_RS11160	COG0588	phosphoglycerate mutase activity
AHML_RS11165	COG3706	GGDEF domain
AHML_RS11175	COG2840	Smr protein MutS2
AHML_RS11180	COG2890	protein-(glutamine-N5) methyltransferase activity
AHML_RS11185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AHML_RS11195	COG0513	Belongs to the DEAD box helicase family
AHML_RS11200	COG5654	RES domain protein
AHML_RS11210	COG0814	amino acid
AHML_RS11215	COG1609	Transcriptional regulator
AHML_RS11220	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS11220	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS11225	COG1105	Belongs to the carbohydrate kinase PfkB family
AHML_RS11230	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS11230	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AHML_RS11230	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHML_RS11235	COG2140	Oxalate decarboxylase
AHML_RS11240	COG1609	Transcriptional regulator
AHML_RS11255	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS11255	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS11260	COG3715	PTS system
AHML_RS11265	COG3716	PTS system mannose fructose sorbose family IID component
AHML_RS11270	COG2942	2-epimerase
AHML_RS11275	COG3313	Fe-S protein
AHML_RS11280	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AHML_RS11285	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHML_RS11290	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHML_RS11295	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHML_RS11305	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHML_RS11325	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AHML_RS11330	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AHML_RS11335	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AHML_RS11340	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AHML_RS11345	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AHML_RS11350	COG0072	phenylalanine-tRNA ligase activity
AHML_RS11350	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHML_RS11355	COG0776	regulation of translation
AHML_RS11385	COG2199	diguanylate cyclase activity
AHML_RS11390	COG1609	Transcriptional regulator
AHML_RS11395	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHML_RS11400	COG1879	ABC-type sugar transport system periplasmic component
AHML_RS11405	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHML_RS11410	COG1129	ABC transporter
AHML_RS11415	COG1869	D-ribose catabolic process
AHML_RS11420	COG0625	glutathione transferase activity
AHML_RS11435	COG0037	tRNA processing
AHML_RS11440	COG0589	response to stress
AHML_RS11445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHML_RS11470	COG2010	Cytochrome c
AHML_RS11485	COG3278	Belongs to the heme-copper respiratory oxidase family
AHML_RS11495	COG1956	GAF domain-containing protein
AHML_RS11500	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
AHML_RS11510	COG0308	aminopeptidase N
AHML_RS11520	COG2902	Dehydrogenase
AHML_RS11525	COG0167	dihydroorotate dehydrogenase activity
AHML_RS11535	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHML_RS11535	COG0116	Belongs to the methyltransferase superfamily
AHML_RS11545	COG0488	(ABC) transporter
AHML_RS11555	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHML_RS11560	COG1067	ATP-dependent peptidase activity
AHML_RS11570	COG3141	response to X-ray
AHML_RS11580	COG4221	oxidoreductase activity
AHML_RS11625	COG0372	Belongs to the citrate synthase family
AHML_RS11630	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AHML_RS11640	COG2995	paraquat-inducible protein a
AHML_RS11645	COG3008	intermembrane lipid transfer
AHML_RS11650	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHML_RS11650	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AHML_RS11665	COG0084	hydrolase, TatD family'
AHML_RS11670	COG0470	DNA polymerase III
AHML_RS11675	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AHML_RS11680	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AHML_RS11685	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AHML_RS11695	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHML_RS11700	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS11710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AHML_RS11715	COG0416	fatty acid biosynthetic process
AHML_RS11720	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AHML_RS11725	COG1399	metal-binding, possibly nucleic acid-binding protein
AHML_RS11740	COG2814	Major facilitator Superfamily
AHML_RS11745	COG0424	maF-like protein
AHML_RS11755	COG0564	pseudouridine synthase activity
AHML_RS11760	COG1530	ribonuclease E activity
AHML_RS11765	COG0306	phosphate transporter
AHML_RS11770	COG0717	Belongs to the dCTP deaminase family
AHML_RS11775	COG0572	uridine kinase
AHML_RS11780	COG0489	protein tyrosine kinase activity
AHML_RS11785	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHML_RS11785	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHML_RS11790	COG0625	glutathione transferase activity
AHML_RS11795	COG1254	Belongs to the acylphosphatase family
AHML_RS11800	COG0840	transmembrane signaling receptor activity
AHML_RS11805	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHML_RS11825	COG0709	Synthesizes selenophosphate from selenide and ATP
AHML_RS11830	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
AHML_RS11835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHML_RS11840	COG3437	response regulator, receiver
AHML_RS11860	COG1643	Atp-dependent helicase
AHML_RS11865	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AHML_RS11865	COG0517	IMP dehydrogenase activity
AHML_RS11865	COG0617	tRNA 3'-terminal CCA addition
AHML_RS11880	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AHML_RS11890	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AHML_RS11895	COG2832	Protein of unknown function (DUF454)
AHML_RS11900	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHML_RS11910	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AHML_RS12015	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AHML_RS12020	COG0318	PFAM AMP-dependent synthetase and ligase
AHML_RS12025	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AHML_RS12025	COG0596	Alpha beta hydrolase
AHML_RS12025	COG2226	methyltransferase
AHML_RS12035	COG1214	PFAM Peptidase M22, glycoprotease
AHML_RS12040	COG1199	ATP-dependent helicase activity
AHML_RS12050	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AHML_RS12055	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AHML_RS12060	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AHML_RS12065	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHML_RS12065	COG0131	Imidazoleglycerol-phosphate dehydratase
AHML_RS12070	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AHML_RS12075	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AHML_RS12080	COG3437	response regulator, receiver
AHML_RS12085	COG2199	diguanylate cyclase activity
AHML_RS12090	COG2205	protein histidine kinase activity
AHML_RS12090	COG0784	Response regulator, receiver
AHML_RS12090	COG2198	Histidine kinase
AHML_RS12095	COG0107	imidazoleglycerol-phosphate synthase activity
AHML_RS12100	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AHML_RS12100	COG0140	phosphoribosyl-ATP diphosphatase activity
AHML_RS12105	COG0318	PFAM AMP-dependent synthetase and ligase
AHML_RS12110	COG1288	antiporter activity
AHML_RS12120	COG3134	Outer membrane lipoprotein
AHML_RS12130	COG2080	2 iron, 2 sulfur cluster binding
AHML_RS12135	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHML_RS12140	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHML_RS12145	COG2252	PERMEase
AHML_RS12150	COG0402	S-adenosylhomocysteine deaminase activity
AHML_RS12155	COG2233	PERMEase
AHML_RS12160	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHML_RS12160	COG2080	2 iron, 2 sulfur cluster binding
AHML_RS12165	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHML_RS12170	COG0402	S-adenosylhomocysteine deaminase activity
AHML_RS12175	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS12175	COG0493	'glutamate synthase
AHML_RS12185	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AHML_RS12190	COG3608	succinylglutamate desuccinylase aspartoacylase
AHML_RS12190	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AHML_RS12195	COG0697	spore germination
AHML_RS12200	COG0549	Belongs to the carbamate kinase family
AHML_RS12210	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHML_RS12215	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AHML_RS12220	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHML_RS12225	COG3829	transcription factor binding
AHML_RS12230	COG4388	Caudovirus prohead serine protease
AHML_RS12260	COG1024	Enoyl-CoA hydratase
AHML_RS12260	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHML_RS12265	COG0183	Belongs to the thiolase family
AHML_RS12270	COG0714	Associated with various cellular activities
AHML_RS12300	COG1595	DNA-templated transcription, initiation
AHML_RS12320	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AHML_RS12340	COG3123	guanosine phosphorylase activity
AHML_RS12345	COG1760	l-serine dehydratase
AHML_RS12350	COG1760	l-serine dehydratase
AHML_RS12355	COG2951	lytic endotransglycosylase activity
AHML_RS12360	COG3100	YcgL domain-containing protein
AHML_RS12365	COG0850	regulation of cytokinetic process
AHML_RS12370	COG2894	cell division
AHML_RS12375	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AHML_RS12380	COG3099	Belongs to the UPF0263 family
AHML_RS12385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHML_RS12425	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AHML_RS12430	COG0697	spore germination
AHML_RS12435	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AHML_RS12440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHML_RS12450	COG0307	riboflavin synthase, alpha
AHML_RS12460	COG0534	Mate efflux family protein
AHML_RS12480	COG0417	DNA replication proofreading
AHML_RS12505	COG1560	Kdo2-lipid A biosynthetic process
AHML_RS12510	COG1560	Kdo2-lipid A biosynthetic process
AHML_RS12520	COG0583	DNA-binding transcription factor activity
AHML_RS12525	COG0673	inositol 2-dehydrogenase activity
AHML_RS12530	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AHML_RS12535	COG0583	DNA-binding transcription factor activity
AHML_RS12540	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS12545	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHML_RS12555	COG5001	Diguanylate cyclase
AHML_RS12555	COG3300	MHYT domain
AHML_RS12560	COG2723	6-phospho-beta-galactosidase activity
AHML_RS12565	COG0583	DNA-binding transcription factor activity
AHML_RS12570	COG3706	GGDEF domain
AHML_RS12585	COG0667	Aldo Keto reductase
AHML_RS12590	COG0583	DNA-binding transcription factor activity
AHML_RS12595	COG0702	epimerase
AHML_RS12600	COG0823	Involved in the tonB-independent uptake of proteins
AHML_RS12600	COG1506	peptidase
AHML_RS12605	COG1073	alpha beta
AHML_RS12620	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AHML_RS12630	COG2003	Belongs to the UPF0758 family
AHML_RS12640	COG5001	Diguanylate cyclase
AHML_RS12640	COG5002	protein histidine kinase activity
AHML_RS12660	COG0730	response to heat
AHML_RS12670	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS12680	COG1024	Enoyl-CoA hydratase
AHML_RS12685	COG1024	Enoyl-CoA hydratase
AHML_RS12690	COG1960	acyl-CoA dehydrogenase activity
AHML_RS12700	COG1960	acyl-CoA dehydrogenase activity
AHML_RS12705	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AHML_RS12740	COG1584	GPR1 FUN34 yaaH family protein
AHML_RS12755	COG1115	amino acid carrier protein
AHML_RS12790	COG1024	Enoyl-CoA hydratase
AHML_RS12805	COG3162	membrane
AHML_RS12810	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHML_RS12815	COG0488	(ABC) transporter
AHML_RS12820	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHML_RS12830	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AHML_RS12835	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AHML_RS12840	COG0740	serine-type endopeptidase activity
AHML_RS12845	COG0544	peptidyl-prolyl cis-trans isomerase activity
AHML_RS12855	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AHML_RS12860	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHML_RS12865	COG1136	(ABC) transporter
AHML_RS12870	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHML_RS12880	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AHML_RS12885	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
AHML_RS12890	COG4166	transmembrane transport
AHML_RS12895	COG0697	spore germination
AHML_RS12905	COG2062	phosphohistidine phosphatase, SixA
AHML_RS12930	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AHML_RS12930	COG2169	Transcriptional regulator
AHML_RS12990	COG0582	viral genome integration into host DNA
AHML_RS12995	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHML_RS12995	COG0519	Catalyzes the synthesis of GMP from XMP
AHML_RS13000	COG0517	IMP dehydrogenase activity
AHML_RS13000	COG0516	GMP reductase activity
AHML_RS13005	COG3158	transport of potassium into the cell
AHML_RS13025	COG0697	spore germination
AHML_RS13030	COG1570	exodeoxyribonuclease VII activity
AHML_RS13045	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHML_RS13050	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AHML_RS13055	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AHML_RS13095	COG4771	TonB-dependent receptor
AHML_RS13100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHML_RS13105	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHML_RS13110	COG1120	ATPase activity
AHML_RS13115	COG2977	Belongs to the P-Pant transferase superfamily
AHML_RS13120	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AHML_RS13125	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHML_RS13135	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS13140	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHML_RS13145	COG3433	isochorismatase activity
AHML_RS13145	COG1535	isochorismatase
AHML_RS13150	COG1021	2,3-dihydroxybenzoate-AMP ligase
AHML_RS13170	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHML_RS13190	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHML_RS13200	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AHML_RS13205	COG0563	adenylate kinase activity
AHML_RS13210	COG0326	Molecular chaperone. Has ATPase activity
AHML_RS13215	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AHML_RS13235	COG3383	formate dehydrogenase (NAD+) activity
AHML_RS13240	COG3383	formate dehydrogenase (NAD+) activity
AHML_RS13245	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS13250	COG3158	transport of potassium into the cell
AHML_RS13255	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHML_RS13260	COG0651	ATP synthesis coupled electron transport
AHML_RS13265	COG0650	Formate hydrogenlyase subunit 4
AHML_RS13270	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AHML_RS13270	COG3261	NADH dehydrogenase
AHML_RS13275	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS13280	COG3260	NADH ubiquinone oxidoreductase 20
AHML_RS13290	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHML_RS13295	COG1921	L-seryl-tRNASec selenium transferase activity
AHML_RS13305	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AHML_RS13310	COG0298	carbon dioxide binding
AHML_RS13320	COG0309	Hydrogenase expression formation protein (HypE)
AHML_RS13325	COG0375	protein maturation
AHML_RS13330	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AHML_RS13335	COG3842	ATPase activity
AHML_RS13340	COG0444	Belongs to the ABC transporter superfamily
AHML_RS13345	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHML_RS13350	COG0601	transmembrane transport
AHML_RS13355	COG0747	negative chemotaxis
AHML_RS13360	COG1773	rubredoxin
AHML_RS13365	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHML_RS13370	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AHML_RS13375	COG5557	Pfam Polysulphide reductase, NrfD
AHML_RS13380	COG0437	4 iron, 4 sulfur cluster binding
AHML_RS13385	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AHML_RS13390	COG0745	RESPONSE REGULATOR receiver
AHML_RS13400	COG2198	Histidine kinase
AHML_RS13400	COG0643	Histidine kinase
AHML_RS13405	COG3290	protein histidine kinase activity
AHML_RS13405	COG0840	transmembrane signaling receptor activity
AHML_RS13410	COG0835	chemotaxis
AHML_RS13420	COG2201	protein-glutamate methylesterase activity
AHML_RS13430	COG0840	transmembrane signaling receptor activity
AHML_RS13435	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHML_RS13500	COG0659	secondary active sulfate transmembrane transporter activity
AHML_RS13530	COG0672	)-iron permease
AHML_RS13550	COG2814	Major facilitator Superfamily
AHML_RS13560	COG1136	(ABC) transporter
AHML_RS13565	COG0577	efflux transmembrane transporter activity
AHML_RS13585	COG1139	Iron-sulfur cluster binding protein
AHML_RS13595	COG1620	l-lactate permease
AHML_RS13600	COG0583	DNA-binding transcription factor activity
AHML_RS13610	COG0346	lactoylglutathione lyase activity
AHML_RS13615	COG0596	Alpha beta hydrolase
AHML_RS13640	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHML_RS13645	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AHML_RS13645	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHML_RS13650	COG0527	aspartate kinase activity
AHML_RS13660	COG1368	sulfuric ester hydrolase activity
AHML_RS13665	COG1619	proteins homologs of microcin C7 resistance protein MccF
AHML_RS13670	COG4667	esterase of the alpha-beta hydrolase superfamily
AHML_RS13690	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHML_RS13690	COG1648	precorrin-2 dehydrogenase activity
AHML_RS13700	COG0393	Putative heavy-metal-binding
AHML_RS13720	COG1252	NADH dehydrogenase
AHML_RS13725	COG3150	esterase
AHML_RS13730	COG2233	PERMEase
AHML_RS13745	COG2354	Protein conserved in bacteria
AHML_RS13755	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHML_RS13760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHML_RS13795	COG0537	adenosine 5'-monophosphoramidase activity
AHML_RS13810	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AHML_RS13825	COG1301	dicarboxylic acid transport
AHML_RS13835	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHML_RS13840	COG0861	Integral membrane protein TerC family
AHML_RS13860	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHML_RS13865	COG0601	transmembrane transport
AHML_RS13875	COG2095	MarC family integral membrane protein
AHML_RS13885	COG1454	alcohol dehydrogenase
AHML_RS13885	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS13890	COG2199	diguanylate cyclase activity
AHML_RS13890	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHML_RS13895	COG3275	phosphorelay sensor kinase activity
AHML_RS13900	COG3279	Response regulator of the LytR AlgR family
AHML_RS13905	COG1966	Carbon starvation protein
AHML_RS13915	COG1566	PFAM secretion protein HlyD family protein
AHML_RS13920	COG1061	Type III restriction enzyme res subunit
AHML_RS13925	COG2027	D-alanyl-D-alanine carboxypeptidase
AHML_RS13930	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AHML_RS13940	COG0436	Aminotransferase
AHML_RS13945	COG1288	antiporter activity
AHML_RS13950	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHML_RS13965	COG0697	spore germination
AHML_RS13970	COG4657	Part of a membrane complex involved in electron transport
AHML_RS13975	COG2878	Part of a membrane complex involved in electron transport
AHML_RS13985	COG4658	electron transport chain
AHML_RS13990	COG4659	FMN binding
AHML_RS13995	COG4660	Part of a membrane complex involved in electron transport
AHML_RS14000	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AHML_RS14005	COG0346	lactoylglutathione lyase activity
AHML_RS14020	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AHML_RS14025	COG2056	Na+-H+ antiporter family
AHML_RS14035	COG2050	protein possibly involved in aromatic compounds catabolism
AHML_RS14045	COG0277	FAD linked oxidase domain protein
AHML_RS14045	COG0247	lactate metabolic process
AHML_RS14055	COG1253	flavin adenine dinucleotide binding
AHML_RS14060	COG1902	pentaerythritol trinitrate reductase activity
AHML_RS14065	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHML_RS14070	COG0647	UMP catabolic process
AHML_RS14075	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHML_RS14075	COG4651	solute:proton antiporter activity
AHML_RS14085	COG0367	asparagine synthase
AHML_RS14095	COG0625	glutathione transferase activity
AHML_RS14100	COG0625	glutathione transferase activity
AHML_RS14110	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AHML_RS14125	COG0564	pseudouridine synthase activity
AHML_RS14130	COG5001	Diguanylate cyclase
AHML_RS14135	COG0840	transmembrane signaling receptor activity
AHML_RS14145	COG0392	lysyltransferase activity
AHML_RS14145	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AHML_RS14155	COG2194	sulfuric ester hydrolase activity
AHML_RS14175	COG0670	Belongs to the BI1 family
AHML_RS14180	COG1289	transmembrane transporter activity
AHML_RS14185	COG2920	part of a sulfur-relay system
AHML_RS14190	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AHML_RS14195	COG0285	dihydrofolate synthase activity
AHML_RS14200	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AHML_RS14205	COG0101	tRNA pseudouridine synthase activity
AHML_RS14215	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHML_RS14220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHML_RS14225	COG0671	phosphoesterase, PA-phosphatase related
AHML_RS14230	COG1464	Belongs to the NlpA lipoprotein family
AHML_RS14275	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AHML_RS14275	COG0574	Belongs to the PEP-utilizing enzyme family
AHML_RS14280	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AHML_RS14345	COG1242	4 iron, 4 sulfur cluster binding
AHML_RS14350	COG0070	glutamate synthase
AHML_RS14350	COG0069	glutamate synthase activity
AHML_RS14350	COG0067	glutamate synthase
AHML_RS14355	COG0493	'glutamate synthase
AHML_RS14360	COG1126	abc transporter atp-binding protein
AHML_RS14365	COG0765	amino acid transport
AHML_RS14370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS14385	COG0789	Transcriptional regulator
AHML_RS14400	COG4104	PAAR repeat-containing protein
AHML_RS14410	COG0513	Belongs to the DEAD box helicase family
AHML_RS14415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHML_RS14445	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHML_RS14450	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AHML_RS14455	COG0505	Belongs to the CarA family
AHML_RS14460	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AHML_RS14470	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AHML_RS14475	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AHML_RS14480	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AHML_RS14485	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHML_RS14490	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AHML_RS14495	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHML_RS14505	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
AHML_RS14515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS14515	COG2205	protein histidine kinase activity
AHML_RS14530	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHML_RS14555	COG0023	Translation Initiation Factor
AHML_RS14560	COG2119	membrane
AHML_RS14590	COG2199	diguanylate cyclase activity
AHML_RS14590	COG2203	Gaf domain
AHML_RS14605	COG0215	cysteine-tRNA ligase activity
AHML_RS14610	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHML_RS14620	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHML_RS14625	COG3301	Polysulphide reductase, NrfD
AHML_RS14630	COG0437	4 iron, 4 sulfur cluster binding
AHML_RS14635	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHML_RS14710	COG3039	Transposase
AHML_RS14715	COG3718	enzyme involved in inositol metabolism
AHML_RS14725	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHML_RS14730	COG0673	inositol 2-dehydrogenase activity
AHML_RS14735	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHML_RS14745	COG1879	ABC-type sugar transport system periplasmic component
AHML_RS14750	COG0673	inositol 2-dehydrogenase activity
AHML_RS14760	COG3962	Belongs to the TPP enzyme family
AHML_RS14780	COG4372	Transposase
AHML_RS14800	COG0582	viral genome integration into host DNA
AHML_RS14825	COG0322	excinuclease ABC activity
AHML_RS14830	COG2197	response regulator
AHML_RS14835	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AHML_RS14840	COG2835	tetraacyldisaccharide 4'-kinase activity
AHML_RS14845	COG1663	tetraacyldisaccharide 4'-kinase activity
AHML_RS14855	COG0658	competence protein
AHML_RS14855	COG2333	competence protein COMEC
AHML_RS14885	COG2916	Histone family protein nucleoid-structuring protein H-NS
AHML_RS14890	COG5642	Protein of unknown function (DUF2384)
AHML_RS14975	COG0433	COG0433 Predicted ATPase
AHML_RS14980	COG1448	Aminotransferase
AHML_RS14995	COG1199	ATP-dependent helicase activity
AHML_RS15005	COG0123	including yeast histone deacetylase and acetoin utilization protein
AHML_RS15010	COG0477	Major facilitator Superfamily
AHML_RS15015	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AHML_RS15045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHML_RS15060	COG2271	Major facilitator Superfamily
AHML_RS15070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS15075	COG0765	amino acid transport
AHML_RS15080	COG1126	abc transporter atp-binding protein
AHML_RS15095	COG0531	amino acid
AHML_RS15110	COG1253	flavin adenine dinucleotide binding
AHML_RS15115	COG0704	Plays a role in the regulation of phosphate uptake
AHML_RS15120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AHML_RS15125	COG0581	inorganic phosphate transmembrane transporter activity
AHML_RS15130	COG0573	inorganic phosphate transmembrane transporter activity
AHML_RS15135	COG0590	tRNA wobble adenosine to inosine editing
AHML_RS15145	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AHML_RS15165	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AHML_RS15170	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AHML_RS15175	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AHML_RS15180	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AHML_RS15205	COG2716	regulation of RNA biosynthetic process
AHML_RS15210	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AHML_RS15220	COG2239	Acts as a magnesium transporter
AHML_RS15230	COG1256	bacterial-type flagellum assembly
AHML_RS15235	COG1705	Flagellar rod assembly protein muramidase FlgJ
AHML_RS15235	COG3951	Flagellar rod assembly protein muramidase FlgJ
AHML_RS15240	COG1706	bacterial-type flagellum-dependent cell motility
AHML_RS15245	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AHML_RS15255	COG4787	bacterial-type flagellum-dependent cell motility
AHML_RS15275	COG1815	bacterial-type flagellum-dependent cell motility
AHML_RS15280	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AHML_RS15285	COG0784	Response regulator, receiver
AHML_RS15285	COG0835	chemotaxis
AHML_RS15290	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AHML_RS15305	COG0622	Phosphoesterase
AHML_RS15335	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHML_RS15340	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHML_RS15345	COG1882	Formate acetyltransferase
AHML_RS15350	COG1349	DNA-binding transcription factor activity
AHML_RS15355	COG0697	spore germination
AHML_RS15385	COG1278	Cold shock
AHML_RS15425	COG3132	Protein of unknown function, DUF480
AHML_RS15435	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHML_RS15455	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AHML_RS15465	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AHML_RS15470	COG1091	dTDP-4-dehydrorhamnose reductase activity
AHML_RS15475	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AHML_RS15485	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
AHML_RS15485	COG0662	Cupin 2, conserved barrel domain protein
AHML_RS15490	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHML_RS15495	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
AHML_RS15505	COG2244	polysaccharide biosynthetic process
AHML_RS15525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHML_RS15530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS15535	COG1309	transcriptional regulator
AHML_RS15550	COG1946	Acyl-CoA thioesterase
AHML_RS15560	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AHML_RS15570	COG0009	L-threonylcarbamoyladenylate synthase
AHML_RS15580	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AHML_RS15585	COG0512	Glutamine amidotransferase of anthranilate synthase
AHML_RS15585	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHML_RS15590	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHML_RS15595	COG0134	indole-3-glycerol-phosphate synthase activity
AHML_RS15595	COG0135	phosphoribosylanthranilate isomerase activity
AHML_RS15600	COG0133	tryptophan synthase activity
AHML_RS15605	COG0159	tryptophan synthase activity
AHML_RS15635	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHML_RS15655	COG3311	Transcriptional regulator
AHML_RS15670	COG1335	isochorismatase
AHML_RS15675	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AHML_RS15680	COG1304	FMN binding
AHML_RS15685	COG0549	Belongs to the carbamate kinase family
AHML_RS15700	COG0583	DNA-binding transcription factor activity
AHML_RS15740	COG2003	Belongs to the UPF0758 family
AHML_RS15780	COG3381	protein complex oligomerization
AHML_RS15790	COG3005	denitrification pathway
AHML_RS15795	COG0745	RESPONSE REGULATOR receiver
AHML_RS15805	COG1879	ABC-type sugar transport system periplasmic component
AHML_RS15810	COG2205	protein histidine kinase activity
AHML_RS15810	COG2198	Histidine kinase
AHML_RS15810	COG0784	Response regulator, receiver
AHML_RS15815	COG2814	Major facilitator Superfamily
AHML_RS15820	COG0109	protoheme IX farnesyltransferase activity
AHML_RS15825	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AHML_RS15830	COG1845	cytochrome c oxidase, subunit III
AHML_RS15835	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AHML_RS15840	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AHML_RS15885	COG2211	Major facilitator Superfamily
AHML_RS15900	COG0708	Exodeoxyribonuclease III
AHML_RS15920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS15925	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHML_RS15945	COG0095	Lipoate-protein ligase
AHML_RS15975	COG0640	Transcriptional regulator
AHML_RS15990	COG1285	pathogenesis
AHML_RS16020	COG0484	heat shock protein binding
AHML_RS16025	COG0443	Heat shock 70 kDa protein
AHML_RS16030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AHML_RS16035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AHML_RS16040	COG0497	DNA recombination
AHML_RS16050	COG1227	inorganic diphosphatase activity
AHML_RS16060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS16065	COG0577	efflux transmembrane transporter activity
AHML_RS16065	COG1136	(ABC) transporter
AHML_RS16075	COG2375	cellular response to nickel ion
AHML_RS16085	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHML_RS16105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHML_RS16110	COG1396	sequence-specific DNA binding
AHML_RS16110	COG1917	Cupin 2, conserved barrel domain protein
AHML_RS16125	COG0531	amino acid
AHML_RS16135	COG0531	amino acid
AHML_RS16145	COG1283	sodium-dependent phosphate transmembrane transporter activity
AHML_RS16155	COG3384	dioxygenase
AHML_RS16160	COG2205	protein histidine kinase activity
AHML_RS16160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHML_RS16175	COG0813	purine-nucleoside phosphorylase activity
AHML_RS16185	COG0488	(ABC) transporter
AHML_RS16200	COG4319	ketosteroid isomerase
AHML_RS16205	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHML_RS16210	COG0083	homoserine kinase activity
AHML_RS16220	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AHML_RS16225	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AHML_RS16240	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHML_RS16250	COG0745	RESPONSE REGULATOR receiver
AHML_RS16265	COG4988	ABC transporter
AHML_RS16270	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AHML_RS16290	COG1720	tRNA m6t6A37 methyltransferase activity
AHML_RS16305	COG0542	response to heat
AHML_RS16310	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AHML_RS16315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS16325	COG2190	(PTS) system
AHML_RS16340	COG3038	cytochrome b561
AHML_RS16355	COG0419	ATPase involved in DNA repair
AHML_RS16360	COG0420	3'-5' exonuclease activity
AHML_RS16370	COG2974	May be involved in recombination
AHML_RS16380	COG4651	solute:proton antiporter activity
AHML_RS16380	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHML_RS16395	COG0469	pyruvate kinase activity
AHML_RS16400	COG1196	nuclear chromosome segregation
AHML_RS16400	COG3264	Mechanosensitive ion channel
AHML_RS16410	COG2706	6-phosphogluconolactonase activity
AHML_RS16430	COG0281	malic enzyme
AHML_RS16445	COG0437	4 iron, 4 sulfur cluster binding
AHML_RS16450	COG3383	formate dehydrogenase (NAD+) activity
AHML_RS16450	COG3383	formate dehydrogenase (NAD+) activity
AHML_RS16485	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AHML_RS16490	COG1910	domain protein
AHML_RS16495	COG3852	Histidine kinase
AHML_RS16500	COG2204	response regulator
AHML_RS16510	COG4662	Binding-protein-dependent transport system inner membrane component
AHML_RS16520	COG0746	molybdenum cofactor guanylyltransferase activity
AHML_RS16525	COG0303	'Molybdopterin
AHML_RS16530	COG1289	transmembrane transporter activity
AHML_RS16535	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHML_RS16565	COG3220	belongs to the UPF0276 family
AHML_RS16595	COG2205	protein histidine kinase activity
AHML_RS16595	COG0784	Response regulator, receiver
AHML_RS16600	COG4166	transmembrane transport
AHML_RS16605	COG0601	transmembrane transport
AHML_RS16610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHML_RS16615	COG0444	Belongs to the ABC transporter superfamily
AHML_RS16620	COG4608	Belongs to the ABC transporter superfamily
AHML_RS16630	COG2971	BadF BadG BcrA BcrD
AHML_RS16640	COG0840	transmembrane signaling receptor activity
AHML_RS16660	COG3724	N-succinylarginine dihydrolase activity
AHML_RS16665	COG0616	signal peptide processing
AHML_RS16670	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS16675	COG0583	DNA-binding transcription factor activity
AHML_RS16685	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHML_RS16695	COG0583	DNA-binding transcription factor activity
AHML_RS16700	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AHML_RS16705	COG1881	PFAM PEBP family protein
AHML_RS16715	COG3408	Glycogen debranching enzyme
AHML_RS16715	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AHML_RS16720	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHML_RS16725	COG0739	heme binding
AHML_RS16730	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AHML_RS16755	COG2200	EAL domain
AHML_RS16765	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AHML_RS16775	COG3091	SprT-like family
AHML_RS16785	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AHML_RS16790	COG0189	ligase activity
AHML_RS16800	COG1678	Uncharacterized ACR, COG1678
AHML_RS16805	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AHML_RS16810	COG3104	oligopeptide transport
AHML_RS16820	COG0714	Associated with various cellular activities
AHML_RS16835	COG1115	amino acid carrier protein
AHML_RS16840	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHML_RS16855	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AHML_RS16865	COG1301	dicarboxylic acid transport
AHML_RS16870	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AHML_RS16875	COG2912	Transglutaminase-like superfamily
AHML_RS16885	COG2890	protein-(glutamine-N5) methyltransferase activity
AHML_RS16890	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AHML_RS16895	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AHML_RS16900	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AHML_RS16915	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AHML_RS16920	COG0737	Belongs to the 5'-nucleotidase family
AHML_RS16925	COG0193	aminoacyl-tRNA hydrolase activity
AHML_RS16930	COG0012	GTP binding
AHML_RS16975	COG0490	domain, Protein
AHML_RS16975	COG0471	metal ion transport
AHML_RS16985	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AHML_RS17005	COG0366	Alpha amylase catalytic
AHML_RS17015	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHML_RS17015	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHML_RS17015	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHML_RS17015	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHML_RS17025	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHML_RS17035	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS17045	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AHML_RS17060	COG0180	Tryptophanyl-tRNA synthetase
AHML_RS17070	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AHML_RS17075	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AHML_RS17085	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AHML_RS17090	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AHML_RS17120	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AHML_RS17125	COG0583	DNA-binding transcription factor activity
AHML_RS17145	COG0583	DNA-binding transcription factor activity
AHML_RS17160	COG0739	heme binding
AHML_RS17170	COG1511	domain protein
AHML_RS17170	COG3264	Mechanosensitive ion channel
AHML_RS17175	COG0584	glycerophosphoryl diester phosphodiesterase
AHML_RS17185	COG1053	succinate dehydrogenase
AHML_RS17190	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AHML_RS17195	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
AHML_RS17220	COG3214	Protein conserved in bacteria
AHML_RS17260	COG0642	Histidine kinase
AHML_RS17270	COG0516	GMP reductase activity
AHML_RS17280	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AHML_RS17285	COG3647	Membrane
AHML_RS17295	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHML_RS17315	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHML_RS17330	COG3706	GGDEF domain
AHML_RS17340	COG1335	isochorismatase
AHML_RS17345	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHML_RS17350	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHML_RS17355	COG1702	phosphate starvation-inducible protein PhoH
AHML_RS17360	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AHML_RS17365	COG4535	Mg2 and Co2 transporter CorC
AHML_RS17370	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AHML_RS17375	COG2888	peptidyl-tyrosine sulfation
AHML_RS17380	COG0495	leucyl-tRNA aminoacylation
AHML_RS17395	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AHML_RS17400	COG0799	negative regulation of ribosome biogenesis
AHML_RS17405	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AHML_RS17410	COG0768	penicillin binding
AHML_RS17415	COG0772	Belongs to the SEDS family
AHML_RS17420	COG2951	lytic endotransglycosylase activity
AHML_RS17425	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AHML_RS17430	COG1686	Belongs to the peptidase S11 family
AHML_RS17435	COG2921	Belongs to the UPF0250 family
AHML_RS17440	COG0321	lipoyl(octanoyl) transferase activity
AHML_RS17445	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AHML_RS17455	COG3545	Serine hydrolase
AHML_RS17460	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHML_RS17475	COG0789	Transcriptional regulator
AHML_RS17485	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHML_RS17490	COG1970	mechanosensitive ion channel activity
AHML_RS17495	COG4974	Belongs to the 'phage' integrase family
AHML_RS17505	COG0312	modulator of DNA gyrase
AHML_RS17510	COG0312	modulator of DNA gyrase
AHML_RS17580	COG3279	Response regulator of the LytR AlgR family
AHML_RS17585	COG1966	Carbon starvation protein
AHML_RS17595	COG0114	fumarate hydratase activity
AHML_RS17605	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AHML_RS17620	COG1185	polyribonucleotide nucleotidyltransferase activity
AHML_RS17625	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AHML_RS17630	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AHML_RS17635	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AHML_RS17640	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AHML_RS17645	COG0195	Participates in both transcription termination and antitermination
AHML_RS17650	COG0779	Required for maturation of 30S ribosomal subunits
AHML_RS17665	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AHML_RS17670	COG0149	triose-phosphate isomerase activity
AHML_RS17675	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AHML_RS17680	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AHML_RS17690	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AHML_RS17695	COG1534	Rna-binding protein
AHML_RS17710	COG1360	Flagellar Motor Protein
AHML_RS17715	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHML_RS17720	COG1722	exodeoxyribonuclease VII activity
AHML_RS17725	COG0142	geranyltranstransferase activity
AHML_RS17730	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AHML_RS17740	COG0601	transmembrane transport
AHML_RS17750	COG4172	Belongs to the ABC transporter superfamily
AHML_RS17755	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AHML_RS17760	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AHML_RS17765	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHML_RS17770	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AHML_RS17790	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHML_RS17790	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHML_RS17795	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AHML_RS17810	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AHML_RS17825	COG3381	protein complex oligomerization
AHML_RS17845	COG5001	Diguanylate cyclase
AHML_RS17845	COG3300	MHYT domain
AHML_RS17855	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHML_RS17860	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AHML_RS17865	COG0511	ligase activity, forming carbon-carbon bonds
AHML_RS17870	COG0439	Biotin carboxylase
AHML_RS17880	COG4145	pantothenate transmembrane transporter activity
AHML_RS17885	COG1263	PTS System
AHML_RS17885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS17885	COG2190	(PTS) system
AHML_RS17890	COG0583	DNA-binding transcription factor activity
AHML_RS17895	COG0604	alcohol dehydrogenase
AHML_RS17900	COG2264	protein methyltransferase activity
AHML_RS17915	COG0778	Nitroreductase
AHML_RS17920	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHML_RS17920	COG1902	pentaerythritol trinitrate reductase activity
AHML_RS17925	COG0616	signal peptide processing
AHML_RS17945	COG3139	Protein of unknown function (DUF1315)
AHML_RS17950	COG0252	asparaginase activity
AHML_RS17955	COG0786	glutamate:sodium symporter activity
AHML_RS17965	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AHML_RS17970	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AHML_RS17975	COG0384	phenazine biosynthesis protein PhzF
AHML_RS17980	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHML_RS17985	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHML_RS17990	COG0175	sulfate reduction
AHML_RS17995	COG2113	Glycine betaine
AHML_RS18000	COG4176	ABC-type proline glycine betaine transport system permease component
AHML_RS18005	COG4175	Glycine betaine
AHML_RS18015	COG3610	response to peptide
AHML_RS18020	COG2966	Psort location CytoplasmicMembrane, score
AHML_RS18030	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHML_RS18045	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS18055	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHML_RS18080	COG2986	histidine ammonia-lyase
AHML_RS18105	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHML_RS18110	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHML_RS18145	COG1858	cytochrome C peroxidase
AHML_RS18155	COG2313	pseudouridylate synthase activity
AHML_RS18160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHML_RS18165	COG2146	nitrite reductase [NAD(P)H] activity
AHML_RS18165	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHML_RS18170	COG2146	nitrite reductase [NAD(P)H] activity
AHML_RS18170	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHML_RS18175	COG1116	anion transmembrane transporter activity
AHML_RS18180	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AHML_RS18185	COG1116	anion transmembrane transporter activity
AHML_RS18185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AHML_RS18200	COG0243	molybdopterin cofactor binding
AHML_RS18225	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AHML_RS18240	COG1073	alpha beta
AHML_RS18245	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AHML_RS18250	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHML_RS18255	COG4608	Belongs to the ABC transporter superfamily
AHML_RS18260	COG0444	Belongs to the ABC transporter superfamily
AHML_RS18270	COG4239	(ABC) transporter, permease
AHML_RS18275	COG4174	ABC transporter (Permease)
AHML_RS18290	COG0811	peptide transport
AHML_RS18295	COG0811	peptide transport
AHML_RS18300	COG0848	biopolymer transport protein
AHML_RS18345	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHML_RS18350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHML_RS18355	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHML_RS18360	COG0840	transmembrane signaling receptor activity
AHML_RS18370	COG1278	Cold shock
AHML_RS18405	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AHML_RS18410	COG1162	GTPase activity
AHML_RS18415	COG0688	phosphatidylethanolamine metabolic process
AHML_RS18420	COG4628	conserved protein (DUF2132)
AHML_RS18440	COG5001	Diguanylate cyclase
AHML_RS18440	COG3300	MHYT domain
AHML_RS18445	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AHML_RS18470	COG1132	(ABC) transporter
AHML_RS18480	COG1404	Belongs to the peptidase S8 family
AHML_RS18485	COG2897	thiosulfate sulfurtransferase activity
AHML_RS18490	COG2066	Belongs to the glutaminase family
AHML_RS18495	COG3171	Protein conserved in bacteria
AHML_RS18500	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AHML_RS18505	COG4935	Belongs to the peptidase S8 family
AHML_RS18505	COG2234	aminopeptidase activity
AHML_RS18510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHML_RS18515	COG2200	EAL domain
AHML_RS18520	COG1090	epimerase
AHML_RS18525	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AHML_RS18530	COG4181	ATPase activity
AHML_RS18535	COG2755	lipolytic protein G-D-S-L family
AHML_RS18540	COG0784	Response regulator, receiver
AHML_RS18540	COG0835	chemotaxis
AHML_RS18550	COG2985	domain, Protein
AHML_RS18550	COG0569	domain protein
AHML_RS18555	COG1272	protein, Hemolysin III
AHML_RS18560	COG0076	glutamate decarboxylase activity
AHML_RS18565	COG2917	probably involved in intracellular septation
AHML_RS18570	COG2350	Protein conserved in bacteria
AHML_RS18580	COG1555	photosystem II stabilization
AHML_RS18585	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AHML_RS18590	COG3104	oligopeptide transport
AHML_RS18595	COG0745	RESPONSE REGULATOR receiver
AHML_RS18625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHML_RS18640	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AHML_RS18645	COG1280	lysine exporter protein (LysE YggA)
AHML_RS18670	COG0316	Belongs to the HesB IscA family
AHML_RS18680	COG0038	chloride channel
AHML_RS18685	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AHML_RS18700	COG0671	phosphoesterase, PA-phosphatase related
AHML_RS18710	COG3437	response regulator, receiver
AHML_RS18710	COG0784	Response regulator, receiver
AHML_RS18720	COG2076	Multidrug Resistance protein
AHML_RS18730	COG0346	lactoylglutathione lyase activity
AHML_RS18735	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHML_RS18740	COG1643	Atp-dependent helicase
AHML_RS18750	COG1489	DNA binding
AHML_RS18755	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AHML_RS18760	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHML_RS18775	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AHML_RS18780	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AHML_RS18800	COG1924	4 iron, 4 sulfur cluster binding
AHML_RS18805	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AHML_RS18810	COG0842	Transport permease protein
AHML_RS18815	COG1131	(ABC) transporter
AHML_RS18830	COG0163	prenyltransferase activity
AHML_RS18835	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHML_RS18840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AHML_RS18855	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AHML_RS18870	COG1136	(ABC) transporter
AHML_RS18890	COG0840	transmembrane signaling receptor activity
AHML_RS18910	COG0529	Catalyzes the synthesis of activated sulfate
AHML_RS18915	COG3273	potassium ion transport
AHML_RS18915	COG0471	metal ion transport
AHML_RS18920	COG2895	sulfate adenylyltransferase (ATP) activity
AHML_RS18925	COG0175	sulfate reduction
AHML_RS18930	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHML_RS18930	COG1648	precorrin-2 dehydrogenase activity
AHML_RS18935	COG0330	HflC and HflK could
AHML_RS18940	COG1585	Membrane protein implicated in regulation of membrane protease activity
AHML_RS18945	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AHML_RS18945	COG0517	IMP dehydrogenase activity
AHML_RS18950	COG0488	(ABC) transporter
AHML_RS18960	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AHML_RS18965	COG0583	DNA-binding transcription factor activity
AHML_RS19000	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHML_RS19010	COG0668	transmembrane transport
AHML_RS19020	COG2731	YhcH YjgK YiaL family protein
AHML_RS19035	COG1794	racemase activity, acting on amino acids and derivatives
AHML_RS19050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHML_RS19075	COG0733	neurotransmitter:sodium symporter activity
AHML_RS19085	COG0733	neurotransmitter:sodium symporter activity
AHML_RS19100	COG0561	phosphatase activity
AHML_RS19130	COG1846	Transcriptional regulator
AHML_RS19135	COG1764	response to oxidative stress
AHML_RS19140	COG2130	NADP-dependent
AHML_RS19145	COG1051	belongs to the nudix hydrolase family
AHML_RS19165	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AHML_RS19170	COG1640	4-alpha-glucanotransferase
AHML_RS19175	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHML_RS19180	COG0676	glucose-6-phosphate 1-epimerase activity
AHML_RS19185	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AHML_RS19190	COG0840	transmembrane signaling receptor activity
AHML_RS19235	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AHML_RS19240	COG2885	chlorophyll binding
AHML_RS19245	COG0823	Involved in the tonB-independent uptake of proteins
AHML_RS19260	COG0811	peptide transport
AHML_RS19265	COG0824	Thioesterase
AHML_RS19270	COG3790	cyd operon protein YbgE
AHML_RS19280	COG1294	oxidase, subunit
AHML_RS19285	COG1271	oxidase subunit
AHML_RS19290	COG2255	four-way junction helicase activity
AHML_RS19295	COG0632	four-way junction helicase activity
AHML_RS19300	COG0840	transmembrane signaling receptor activity
AHML_RS19305	COG0442	prolyl-tRNA aminoacylation
AHML_RS19310	COG4221	oxidoreductase activity
AHML_RS19325	COG1024	Enoyl-CoA hydratase
AHML_RS19335	COG0110	maltose O-acetyltransferase activity
AHML_RS19345	COG4166	transmembrane transport
AHML_RS19360	COG1872	DUF167
AHML_RS19365	COG0762	integral membrane protein
AHML_RS19370	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AHML_RS19375	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AHML_RS19390	COG3022	response to hydroperoxide
AHML_RS19395	COG0513	Belongs to the DEAD box helicase family
AHML_RS19400	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AHML_RS19430	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHML_RS19440	COG0776	regulation of translation
AHML_RS19445	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AHML_RS19470	COG0560	Phosphoserine phosphatase
AHML_RS19480	COG5002	protein histidine kinase activity
AHML_RS19480	COG3447	MASE1 domain protein
AHML_RS19480	COG5001	Diguanylate cyclase
AHML_RS19485	COG0813	purine-nucleoside phosphorylase activity
AHML_RS19490	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AHML_RS19495	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AHML_RS19500	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHML_RS19510	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHML_RS19515	COG0084	hydrolase, TatD family'
AHML_RS19520	COG2165	general secretion pathway protein
AHML_RS19525	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHML_RS19530	COG0004	ammonium transporteR
AHML_RS19535	COG4974	Belongs to the 'phage' integrase family
AHML_RS19545	COG2932	Transcriptional regulator
AHML_RS19630	COG4695	Portal protein
AHML_RS19760	COG0795	lipopolysaccharide-transporting ATPase activity
AHML_RS19765	COG0795	lipopolysaccharide-transporting ATPase activity
AHML_RS19770	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHML_RS19775	COG2927	DNA polymerase III (CHI subunit)
AHML_RS19780	COG0525	valine-tRNA ligase activity
AHML_RS19785	COG1253	flavin adenine dinucleotide binding
AHML_RS19790	COG0586	Pfam SNARE associated Golgi protein
AHML_RS19795	COG1686	Belongs to the peptidase S11 family
AHML_RS19830	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AHML_RS19835	COG0527	aspartate kinase activity
AHML_RS19840	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AHML_RS19850	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AHML_RS19855	COG1546	Belongs to the CinA family
AHML_RS19870	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AHML_RS19890	COG3068	Protein conserved in bacteria
AHML_RS19900	COG0739	heme binding
AHML_RS19920	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AHML_RS19925	COG1121	(ABC) transporter
AHML_RS19930	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AHML_RS19940	COG0697	spore germination
AHML_RS19945	COG1573	uracil-dna glycosylase
AHML_RS19950	COG2962	Rard protein
AHML_RS19960	COG2827	Endonuclease containing a URI domain
AHML_RS19975	COG1842	Phage shock protein A
AHML_RS19980	COG0204	Acyl-transferase
AHML_RS20005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHML_RS20055	COG1289	transmembrane transporter activity
AHML_RS20060	COG1566	PFAM secretion protein HlyD family protein
AHML_RS20075	COG1051	belongs to the nudix hydrolase family
AHML_RS20080	COG3150	esterase
AHML_RS20090	COG3151	Protein conserved in bacteria
AHML_RS20095	COG0494	nUDIX hydrolase
AHML_RS20100	COG1538	Outer membrane efflux protein
AHML_RS20105	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AHML_RS20105	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AHML_RS20110	COG1560	Kdo2-lipid A biosynthetic process
AHML_RS20125	COG1392	Phosphate transport regulator
AHML_RS20130	COG0306	phosphate transporter
AHML_RS20135	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AHML_RS20160	COG0583	DNA-binding transcription factor activity
AHML_RS20165	COG1380	Effector of murein hydrolase LrgA
AHML_RS20170	COG1346	cytolysis
AHML_RS20185	COG0617	tRNA 3'-terminal CCA addition
AHML_RS20195	COG3267	Type II secretory pathway component ExeA
AHML_RS20195	COG3409	Peptidoglycan-binding domain 1 protein
AHML_RS20205	COG1194	a g-specific adenine glycosylase
AHML_RS20210	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AHML_RS20220	COG3111	PFAM Bacterial OB fold (BOF) protein
AHML_RS20225	COG3240	lipase activity
AHML_RS20240	COG3009	Protein conserved in bacteria
AHML_RS20245	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHML_RS20245	COG3008	intermembrane lipid transfer
AHML_RS20250	COG2995	paraquat-inducible protein a
AHML_RS20260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHML_RS20270	COG2203	Gaf domain
AHML_RS20270	COG3706	GGDEF domain
AHML_RS20270	COG4251	negative regulation of phosphorylation
AHML_RS20270	COG5001	Diguanylate cyclase
AHML_RS20275	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AHML_RS20280	COG2813	Specifically methylates the guanine in position
AHML_RS20285	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHML_RS20290	COG0297	glycogen (starch) synthase activity
AHML_RS20330	COG1757	Na H antiporter
AHML_RS20335	COG0583	DNA-binding transcription factor activity
AHML_RS20340	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AHML_RS20345	COG3842	ATPase activity
AHML_RS20350	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHML_RS20355	COG1177	transmembrane transport
AHML_RS20360	COG1012	belongs to the aldehyde dehydrogenase family
AHML_RS20370	COG5006	permease, DMT superfamily
AHML_RS20375	COG1522	sequence-specific DNA binding
AHML_RS20380	COG0110	maltose O-acetyltransferase activity
AHML_RS20385	COG0366	Alpha amylase catalytic
AHML_RS20390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHML_RS20390	COG1263	PTS System
AHML_RS20410	COG0252	asparaginase activity
AHML_RS20425	COG1803	Methylglyoxal synthase
AHML_RS20450	COG1444	tRNA N-acetyltransferase activity
AHML_RS20455	COG1028	Short-chain dehydrogenase reductase Sdr
AHML_RS20460	COG0835	chemotaxis
AHML_RS20460	COG0784	Response regulator, receiver
AHML_RS20465	COG3314	Sporulation integral membrane protein YlbJ
AHML_RS20505	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AHML_RS20510	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AHML_RS20525	COG0477	Major facilitator Superfamily
AHML_RS20530	COG0523	cobalamin synthesis protein
AHML_RS20540	COG1280	lysine exporter protein (LysE YggA)
AHML_RS20555	COG1049	propionate catabolic process, 2-methylcitrate cycle
AHML_RS20560	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHML_RS20565	COG0840	transmembrane signaling receptor activity
AHML_RS20570	COG0840	transmembrane signaling receptor activity
AHML_RS20580	COG3447	MASE1 domain protein
AHML_RS20580	COG5002	protein histidine kinase activity
AHML_RS20580	COG5001	Diguanylate cyclase
AHML_RS20585	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHML_RS20590	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHML_RS20595	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AHML_RS20600	COG2186	Transcriptional regulator
AHML_RS20630	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHML_RS20635	COG1459	type II secretion system
AHML_RS20650	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
AHML_RS20655	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AHML_RS20660	COG0494	nUDIX hydrolase
AHML_RS20670	COG0653	protein targeting
AHML_RS20680	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AHML_RS20685	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AHML_RS20690	COG0849	cell division
AHML_RS20695	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AHML_RS20700	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHML_RS20705	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AHML_RS20710	COG0772	Belongs to the SEDS family
AHML_RS20715	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AHML_RS20720	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AHML_RS20725	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AHML_RS20735	COG0768	penicillin binding
AHML_RS20740	COG3116	cell division
AHML_RS20745	COG0275	rRNA processing
AHML_RS20750	COG2001	Belongs to the MraZ family
AHML_RS20755	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AHML_RS20760	COG3107	peptidoglycan biosynthetic process
AHML_RS20765	COG0792	nuclease activity
AHML_RS20770	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHML_RS20775	COG2823	Periplasmic or secreted lipoprotein
AHML_RS20780	COG2969	positive regulation of protein catabolic process
AHML_RS20785	COG0625	glutathione transferase activity
AHML_RS20790	COG2857	Cytochrome c1
AHML_RS20795	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AHML_RS20800	COG0723	plastoquinol--plastocyanin reductase activity
AHML_RS20805	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AHML_RS20810	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AHML_RS20815	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AHML_RS20825	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHML_RS20830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHML_RS20860	COG3964	amidohydrolase
AHML_RS20875	COG3711	transcriptional antiterminator
AHML_RS20875	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS20880	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS20885	COG1660	Displays ATPase and GTPase activities
AHML_RS20890	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHML_RS20900	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AHML_RS20905	COG1137	ATPase activity
AHML_RS20910	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AHML_RS20915	COG3117	lipopolysaccharide transmembrane transporter activity
AHML_RS20920	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AHML_RS20925	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AHML_RS20925	COG0517	IMP dehydrogenase activity
AHML_RS20930	COG1127	ABC transporter
AHML_RS20935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AHML_RS20940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHML_RS20945	COG2854	intermembrane phospholipid transfer
AHML_RS20955	COG5007	Belongs to the BolA IbaG family
AHML_RS20960	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AHML_RS20965	COG0312	modulator of DNA gyrase
AHML_RS20970	COG3028	Belongs to the UPF0307 family
AHML_RS20980	COG2926	Belongs to the UPF0265 family
AHML_RS21015	COG1396	sequence-specific DNA binding
AHML_RS21020	COG3135	benzoate transporter
AHML_RS21045	COG0840	transmembrane signaling receptor activity
AHML_RS21050	COG3047	cAMP biosynthetic process
AHML_RS21060	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AHML_RS21065	COG2197	response regulator
AHML_RS21070	COG0629	single-stranded DNA binding
AHML_RS21090	COG1278	Cold shock
AHML_RS21095	COG4771	TonB-dependent receptor
AHML_RS21100	COG5001	Diguanylate cyclase
AHML_RS21100	COG3706	GGDEF domain
AHML_RS21100	COG4251	negative regulation of phosphorylation
AHML_RS21100	COG2203	Gaf domain
AHML_RS21145	COG0346	lactoylglutathione lyase activity
AHML_RS21155	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AHML_RS21160	COG1074	ATP-dependent DNA helicase activity
AHML_RS21165	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AHML_RS21170	COG2259	Doxx family
AHML_RS21175	COG1741	Belongs to the pirin family
AHML_RS21185	COG0583	DNA-binding transcription factor activity
AHML_RS21210	COG1175	transmembrane transport
AHML_RS21220	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AHML_RS21230	COG2199	diguanylate cyclase activity
AHML_RS21230	COG2203	Gaf domain
AHML_RS21250	COG1247	-acetyltransferase
AHML_RS21255	COG0753	catalase activity
AHML_RS21280	COG0494	nUDIX hydrolase
AHML_RS21285	COG0628	permease
AHML_RS21290	COG4221	oxidoreductase activity
AHML_RS21295	COG2957	Belongs to the agmatine deiminase family
AHML_RS21305	COG3284	Transcriptional regulator
AHML_RS21320	COG1461	Dihydroxyacetone kinase
AHML_RS21325	COG2376	Dihydroxyacetone kinase
AHML_RS21330	COG2252	PERMEase
AHML_RS21370	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHML_RS21375	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHML_RS21380	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AHML_RS21385	COG0049	tRNA binding
AHML_RS21395	COG2168	tRNA wobble position uridine thiolation
AHML_RS21400	COG2923	Belongs to the DsrF TusC family
AHML_RS21410	COG0251	oxidation-reduction process
AHML_RS21415	COG2964	Protein conserved in bacteria
AHML_RS21425	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AHML_RS21430	COG0085	RNA polymerase activity
AHML_RS21435	COG0222	ribosome binding
AHML_RS21440	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AHML_RS21445	COG0081	regulation of translation
AHML_RS21450	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AHML_RS21455	COG0250	Participates in transcription elongation, termination and antitermination
AHML_RS21470	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHML_RS21495	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AHML_RS21500	COG0569	domain protein
AHML_RS21505	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHML_RS21525	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AHML_RS21530	COG3005	denitrification pathway
AHML_RS21535	COG0243	molybdopterin cofactor binding
AHML_RS21565	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AHML_RS21580	COG2204	response regulator
AHML_RS21590	COG2205	protein histidine kinase activity
AHML_RS21610	COG5413	integral membrane protein
AHML_RS21620	COG1522	sequence-specific DNA binding
AHML_RS21625	COG2502	aspartate--ammonia ligase
AHML_RS21630	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AHML_RS21635	COG0542	response to heat
AHML_RS21645	COG0564	pseudouridine synthase activity
AHML_RS21650	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHML_RS21655	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHML_RS21665	COG3681	Belongs to the UPF0597 family
AHML_RS21670	COG2964	Protein conserved in bacteria
AHML_RS21680	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AHML_RS21685	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AHML_RS21690	COG1979	alcohol dehydrogenase
AHML_RS21695	COG2207	Transcriptional regulator
AHML_RS21700	COG3040	lipid binding
AHML_RS21710	COG0688	phosphatidylethanolamine metabolic process
AHML_RS21725	COG0540	Belongs to the ATCase OTCase family
AHML_RS21730	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
AHML_RS21735	COG1438	arginine binding
AHML_RS21740	COG1288	antiporter activity
AHML_RS21745	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHML_RS21770	COG0840	transmembrane signaling receptor activity
AHML_RS21790	COG3250	beta-galactosidase activity
AHML_RS21795	COG1609	Transcriptional regulator
AHML_RS21800	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHML_RS21810	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AHML_RS21815	COG2017	converts alpha-aldose to the beta-anomer
AHML_RS21820	COG0667	Aldo Keto reductase
AHML_RS21825	COG1968	undecaprenyl-diphosphatase activity
AHML_RS21830	COG3806	Anti-sigma factor
AHML_RS21835	COG1595	DNA-templated transcription, initiation
AHML_RS21855	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AHML_RS21860	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AHML_RS21875	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHML_RS21885	COG2116	formate transmembrane transporter activity
AHML_RS21890	COG1648	precorrin-2 dehydrogenase activity
AHML_RS21890	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHML_RS21895	COG2239	Acts as a magnesium transporter
AHML_RS21905	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHML_RS21910	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AHML_RS21920	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AHML_RS21930	COG0514	ATP-dependent DNA helicase (RecQ)
AHML_RS21935	COG2050	protein possibly involved in aromatic compounds catabolism
AHML_RS21950	COG2258	MOSC domain
AHML_RS21955	COG1177	transmembrane transport
AHML_RS21960	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHML_RS21965	COG3842	ATPase activity
AHML_RS21985	COG0174	glutamine synthetase
AHML_RS22005	COG3045	CreA protein
AHML_RS22010	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHML_RS22015	COG0443	Heat shock 70 kDa protein
AHML_RS22030	COG0366	Alpha amylase catalytic
AHML_RS22045	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHML_RS22050	COG0745	RESPONSE REGULATOR receiver
AHML_RS22055	COG2205	protein histidine kinase activity
AHML_RS22065	COG0281	malic enzyme
AHML_RS22070	COG0702	epimerase
AHML_RS22075	COG0254	rRNA binding
AHML_RS22080	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AHML_RS22100	COG0129	dihydroxy-acid dehydratase activity
AHML_RS22110	COG3978	acetolactate synthase activity
AHML_RS22120	COG0606	chelatase, subunit chli
AHML_RS22125	COG0204	Acyl-transferase
AHML_RS22130	COG0204	Acyl-transferase
AHML_RS22135	COG1683	Conserved Protein
AHML_RS22145	COG1335	isochorismatase
AHML_RS22155	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AHML_RS22160	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AHML_RS22165	COG3639	organic phosphonate transmembrane transporter activity
AHML_RS22170	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHML_RS22175	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AHML_RS22185	COG3084	Protein conserved in bacteria
AHML_RS22190	COG3706	GGDEF domain
AHML_RS22190	COG4251	negative regulation of phosphorylation
AHML_RS22190	COG5001	Diguanylate cyclase
AHML_RS22190	COG2203	Gaf domain
AHML_RS22195	COG0789	Transcriptional regulator
AHML_RS22205	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AHML_RS22210	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AHML_RS22215	COG1561	YicC-like family, N-terminal region
AHML_RS22235	COG3306	glycosyltransferase involved in LPS biosynthesis
AHML_RS22250	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHML_RS22260	COG0156	8-amino-7-oxononanoate synthase activity
AHML_RS22265	COG1063	alcohol dehydrogenase
AHML_RS22270	COG3245	cytochrome
AHML_RS22280	COG0210	DNA helicase
AHML_RS22285	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHML_RS22290	COG2166	iron-sulfur cluster assembly
AHML_RS22295	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AHML_RS22330	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AHML_RS22335	COG0848	biopolymer transport protein
AHML_RS22340	COG0811	peptide transport
AHML_RS22345	COG0811	peptide transport
AHML_RS22355	COG2771	luxR family
AHML_RS22360	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AHML_RS22365	COG1349	DNA-binding transcription factor activity
AHML_RS22370	COG0745	RESPONSE REGULATOR receiver
AHML_RS22375	COG2205	protein histidine kinase activity
AHML_RS22385	COG4452	Inner membrane protein CreD
AHML_RS22390	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AHML_RS22395	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AHML_RS22400	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AHML_RS22405	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AHML_RS22410	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AHML_RS22415	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AHML_RS22420	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AHML_RS22430	COG0356	it plays a direct role in the translocation of protons across the membrane
AHML_RS22440	COG1475	DNA binding
AHML_RS22445	COG1192	Involved in chromosome partitioning
AHML_RS22450	COG0357	Ribosomal RNA small subunit methyltransferase G
AHML_RS22455	COG0445	tRNA wobble uridine modification
AHML_RS22460	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHML_RS22465	COG4774	siderophore transport
AHML_RS22470	COG4615	Cyclic peptide transporter
AHML_RS22475	COG1120	ATPase activity
AHML_RS22490	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AHML_RS22495	COG0706	membrane insertase activity
AHML_RS22500	COG0594	ribonuclease P activity
AHML_RS22505	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AHML_RS22510	COG1126	abc transporter atp-binding protein
AHML_RS22565	COG1116	anion transmembrane transporter activity
AHML_RS22570	COG0720	synthase
AHML_RS22605	COG1522	sequence-specific DNA binding
AHML_RS22610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)