locus-tag class description V429_RS00005 PF00308 Bacterial dnaA protein V429_RS00005 PF11638 DnaA N-terminal domain V429_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix V429_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain V429_RS00010 PF02767 DNA polymerase III beta subunit, central domain V429_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain V429_RS00015 PF02463 RecF/RecN/SMC N terminal domain V429_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus V429_RS00020 PF00204 DNA gyrase B V429_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00020 PF01751 Toprim domain V429_RS00020 PF18053 DNA gyrase B subunit insert domain V429_RS00030 PF13280 WYL domain V429_RS00030 PF08279 HTH domain V429_RS00035 PF00011 Hsp20/alpha crystallin family V429_RS00040 PF00011 Hsp20/alpha crystallin family V429_RS00045 PF00155 Aminotransferase class I and II V429_RS00060 PF07690 Major Facilitator Superfamily V429_RS00065 PF00072 Response regulator receiver domain V429_RS00065 PF00486 Transcriptional regulatory protein, C terminal V429_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00070 PF13493 Domain of unknown function (DUF4118) V429_RS00070 PF13492 GAF domain V429_RS00070 PF00512 His Kinase A (phospho-acceptor) domain V429_RS00070 PF02702 Osmosensitive K+ channel His kinase sensor domain V429_RS00075 PF02669 K+-transporting ATPase, c chain V429_RS00085 PF03814 Potassium-transporting ATPase A subunit V429_RS00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V429_RS00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00095 PF00512 His Kinase A (phospho-acceptor) domain V429_RS00100 PF00873 AcrB/AcrD/AcrF family V429_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS00110 PF00440 Bacterial regulatory proteins, tetR family V429_RS00140 PF00224 Pyruvate kinase, barrel domain V429_RS00140 PF02887 Pyruvate kinase, alpha/beta domain V429_RS00145 PF07690 Major Facilitator Superfamily V429_RS00155 PF00512 His Kinase A (phospho-acceptor) domain V429_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00155 PF00672 HAMP domain V429_RS00160 PF14532 Sigma-54 interaction domain V429_RS00160 PF00072 Response regulator receiver domain V429_RS00160 PF02954 Bacterial regulatory protein, Fis family V429_RS00175 PF12146 Serine aminopeptidase, S33 V429_RS00180 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS00185 PF12105 SpoU, rRNA methylase, C-terminal V429_RS00185 PF00588 SpoU rRNA Methylase family V429_RS00190 PF13291 ACT domain V429_RS00190 PF04607 Region found in RelA / SpoT proteins V429_RS00190 PF02824 TGS domain V429_RS00195 PF01192 RNA polymerase Rpb6 V429_RS00200 PF00625 Guanylate kinase V429_RS00205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V429_RS00220 PF00892 EamA-like transporter family V429_RS00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS00235 PF03466 LysR substrate binding domain V429_RS00240 PF00579 tRNA synthetases class I (W and Y) V429_RS00245 PF00582 Universal stress protein family V429_RS00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V429_RS00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region V429_RS00250 PF07055 Enoyl reductase FAD binding domain V429_RS00255 PF00990 Diguanylate cyclase, GGDEF domain V429_RS00260 PF00210 Ferritin-like domain V429_RS00270 PF08722 TnsA endonuclease N terminal V429_RS00270 PF08721 TnsA endonuclease C terminal V429_RS00285 PF13401 AAA domain V429_RS00285 PF11426 Tn7 transposition regulator TnsC V429_RS00290 PF13657 HipA N-terminal domain V429_RS00290 PF07804 HipA-like C-terminal domain V429_RS00295 PF18766 SWI2/SNF2 ATPase V429_RS00295 PF12008 Type I restriction and modification enzyme - subunit R C terminal V429_RS00295 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) V429_RS00305 PF17191 RecG wedge domain V429_RS00305 PF13749 Putative ATP-dependent DNA helicase recG C-terminal V429_RS00305 PF00270 DEAD/DEAH box helicase V429_RS00320 PF12161 HsdM N-terminal domain V429_RS00320 PF02384 N-6 DNA Methylase V429_RS00330 PF07690 Major Facilitator Superfamily V429_RS00335 PF01810 LysE type translocator V429_RS00350 PF16967 E-set like domain V429_RS00350 PF15976 CS1-pili formation C-terminal V429_RS00355 PF18649 EcpB C-terminal domain V429_RS00360 PF16449 Fimbrillin MatB V429_RS00365 PF00072 Response regulator receiver domain V429_RS00365 PF00196 Bacterial regulatory proteins, luxR family V429_RS00370 PF00072 Response regulator receiver domain V429_RS00370 PF00989 PAS fold V429_RS00370 PF01627 Hpt domain V429_RS00370 PF00512 His Kinase A (phospho-acceptor) domain V429_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00370 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00380 PF06580 Histidine kinase V429_RS00380 PF07694 5TMR of 5TMR-LYT V429_RS00385 PF04397 LytTr DNA-binding domain V429_RS00385 PF00072 Response regulator receiver domain V429_RS00390 PF07690 Major Facilitator Superfamily V429_RS00395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain V429_RS00395 PF02222 ATP-grasp domain V429_RS00400 PF00731 AIR carboxylase V429_RS00415 PF03466 LysR substrate binding domain V429_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS00420 PF00593 TonB dependent receptor V429_RS00420 PF07715 TonB-dependent Receptor Plug Domain V429_RS00425 PF01177 Asp/Glu/Hydantoin racemase V429_RS00465 PF07969 Amidohydrolase family V429_RS00470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) V429_RS00475 PF01209 ubiE/COQ5 methyltransferase family V429_RS00480 PF02036 SCP-2 sterol transfer family V429_RS00485 PF03109 ABC1 family V429_RS00490 PF02416 mttA/Hcf106 family V429_RS00495 PF02416 mttA/Hcf106 family V429_RS00500 PF00902 Sec-independent protein translocase protein (TatC) V429_RS00505 PF01026 TatD related DNase V429_RS00510 PF00490 Delta-aminolevulinic acid dehydratase V429_RS00515 PF01432 Peptidase family M3 V429_RS00520 PF03707 Bacterial signalling protein N terminal repeat V429_RS00520 PF00563 EAL domain V429_RS00520 PF00990 Diguanylate cyclase, GGDEF domain V429_RS00525 PF04445 Putative SAM-dependent methyltransferase V429_RS00540 PF02541 Ppx/GppA phosphatase family V429_RS00545 PF00271 Helicase conserved C-terminal domain V429_RS00545 PF00270 DEAD/DEAH box helicase V429_RS00550 PF00085 Thioredoxin V429_RS00555 PF07497 Rho termination factor, RNA-binding domain V429_RS00555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V429_RS00555 PF07498 Rho termination factor, N-terminal domain V429_RS00565 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase V429_RS00570 PF00175 Oxidoreductase NAD-binding domain V429_RS00575 PF04380 Membrane fusogenic activity V429_RS00580 PF12262 Bacterial virulence factor lipase N-terminal V429_RS00585 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease V429_RS00585 PF01694 Rhomboid family V429_RS00590 PF00581 Rhodanese-like domain V429_RS00605 PF00005 ABC transporter V429_RS00610 PF12399 Branched-chain amino acid ATP-binding cassette transporter V429_RS00610 PF00005 ABC transporter V429_RS00615 PF11862 Domain of unknown function (DUF3382) V429_RS00615 PF02653 Branched-chain amino acid transport system / permease component V429_RS00620 PF02653 Branched-chain amino acid transport system / permease component V429_RS00625 PF13458 Periplasmic binding protein V429_RS00630 PF00356 Bacterial regulatory proteins, lacI family V429_RS00635 PF11975 Family 4 glycosyl hydrolase C-terminal domain V429_RS00635 PF02056 Family 4 glycosyl hydrolase V429_RS00640 PF02378 Phosphotransferase system, EIIC V429_RS00640 PF00367 phosphotransferase system, EIIB V429_RS00645 PF00392 Bacterial regulatory proteins, gntR family V429_RS00645 PF07702 UTRA domain V429_RS00650 PF00158 Sigma-54 interaction domain V429_RS00650 PF01590 GAF domain V429_RS00655 PF00753 Metallo-beta-lactamase superfamily V429_RS00655 PF00258 Flavodoxin V429_RS00655 PF00301 Rubredoxin V429_RS00660 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS00660 PF18113 Rubredoxin binding C-terminal domain V429_RS00670 PF12801 4Fe-4S binding domain V429_RS00675 PF03222 Tryptophan/tyrosine permease family V429_RS00695 PF01747 ATP-sulfurylase V429_RS00695 PF14306 PUA-like domain V429_RS00710 PF02092 Glycyl-tRNA synthetase beta subunit V429_RS00710 PF05746 DALR anticodon binding domain V429_RS00715 PF02091 Glycyl-tRNA synthetase alpha subunit V429_RS00720 PF03352 Methyladenine glycosylase V429_RS00725 PF00857 Isochorismatase family V429_RS00730 PF00691 OmpA family V429_RS00730 PF13488 Glycine zipper V429_RS00735 PF01042 Endoribonuclease L-PSP V429_RS00740 PF01206 Sulfurtransferase TusA V429_RS00750 PF01547 Bacterial extracellular solute-binding protein V429_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS00755 PF00512 His Kinase A (phospho-acceptor) domain V429_RS00755 PF00672 HAMP domain V429_RS00760 PF00486 Transcriptional regulatory protein, C terminal V429_RS00760 PF00072 Response regulator receiver domain V429_RS00765 PF02803 Thiolase, C-terminal domain V429_RS00765 PF00108 Thiolase, N-terminal domain V429_RS00770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V429_RS00770 PF00378 Enoyl-CoA hydratase/isomerase V429_RS00770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V429_RS00775 PF00501 AMP-binding enzyme V429_RS00775 PF13193 AMP-binding enzyme C-terminal domain V429_RS00780 PF00557 Metallopeptidase family M24 V429_RS00785 PF01205 Uncharacterized protein family UPF0029 V429_RS00785 PF09186 Domain of unknown function (DUF1949) V429_RS00790 PF02386 Cation transport protein V429_RS00795 PF12724 Flavodoxin domain V429_RS00820 PF00583 Acetyltransferase (GNAT) family V429_RS00820 PF13380 CoA binding domain V429_RS00820 PF13607 Succinyl-CoA ligase like flavodoxin domain V429_RS00835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS00835 PF03466 LysR substrate binding domain V429_RS00840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain V429_RS00840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain V429_RS00845 PF00342 Phosphoglucose isomerase V429_RS00855 PF05552 Conserved TM helix V429_RS00855 PF00924 Mechanosensitive ion channel V429_RS00860 PF00440 Bacterial regulatory proteins, tetR family V429_RS00865 PF00692 dUTPase V429_RS00870 PF04127 DNA / pantothenate metabolism flavoprotein V429_RS00870 PF02441 Flavoprotein V429_RS00875 PF04002 RadC-like JAB domain V429_RS00880 PF00471 Ribosomal protein L33 V429_RS00890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain V429_RS00890 PF06827 Zinc finger found in FPG and IleRS V429_RS00890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain V429_RS00895 PF04393 Protein of unknown function (DUF535) V429_RS00900 PF01467 Cytidylyltransferase-like V429_RS00905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V429_RS00910 PF00535 Glycosyl transferase family 2 V429_RS00915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V429_RS00920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) V429_RS00925 PF03611 PTS system sugar-specific permease component V429_RS00935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS00940 PF00356 Bacterial regulatory proteins, lacI family V429_RS00940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS00945 PF08240 Alcohol dehydrogenase GroES-like domain V429_RS00945 PF00107 Zinc-binding dehydrogenase V429_RS00955 PF03748 Flagellar basal body-associated protein FliL V429_RS00960 PF04345 Chorismate lyase V429_RS00965 PF01040 UbiA prenyltransferase family V429_RS00970 PF01553 Acyltransferase V429_RS00975 PF00717 Peptidase S24-like V429_RS00975 PF01726 LexA DNA binding domain V429_RS00985 PF02630 SCO1/SenC V429_RS00990 PF01554 MatE V429_RS00995 PF00588 SpoU rRNA Methylase family V429_RS01000 PF16527 Two-component sensor protein CpxA, periplasmic domain V429_RS01000 PF00512 His Kinase A (phospho-acceptor) domain V429_RS01000 PF00672 HAMP domain V429_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS01005 PF00486 Transcriptional regulatory protein, C terminal V429_RS01005 PF00072 Response regulator receiver domain V429_RS01010 PF01545 Cation efflux family V429_RS01010 PF16916 Dimerisation domain of Zinc Transporter V429_RS01015 PF06426 Serine acetyltransferase, N-terminal V429_RS01015 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS01025 PF06005 Cell division protein ZapB V429_RS01035 PF01367 5'-3' exonuclease, C-terminal SAM fold V429_RS01035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V429_RS01035 PF00476 DNA polymerase family A V429_RS01035 PF01612 3'-5' exonuclease V429_RS01040 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS01080 PF00356 Bacterial regulatory proteins, lacI family V429_RS01085 PF02837 Glycosyl hydrolases family 2, sugar binding domain V429_RS01085 PF02836 Glycosyl hydrolases family 2, TIM barrel domain V429_RS01085 PF00703 Glycosyl hydrolases family 2 V429_RS01085 PF16353 Domain of unknown function(DUF4981) V429_RS01085 PF02929 Beta galactosidase small chain V429_RS01090 PF04074 YhcH/YjgK/YiaL V429_RS01095 PF13520 Amino acid permease V429_RS01100 PF01588 Putative tRNA binding domain V429_RS01105 PF13520 Amino acid permease V429_RS01110 PF13593 SBF-like CPA transporter family (DUF4137) V429_RS01115 PF03781 Sulfatase-modifying factor enzyme 1 V429_RS01115 PF12867 DinB superfamily V429_RS01125 PF00756 Putative esterase V429_RS01130 PF00107 Zinc-binding dehydrogenase V429_RS01130 PF08240 Alcohol dehydrogenase GroES-like domain V429_RS01135 PF03466 LysR substrate binding domain V429_RS01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS01140 PF02653 Branched-chain amino acid transport system / permease component V429_RS01145 PF02653 Branched-chain amino acid transport system / permease component V429_RS01150 PF00005 ABC transporter V429_RS01155 PF02608 ABC transporter substrate-binding protein PnrA-like V429_RS01160 PF13361 UvrD-like helicase C-terminal domain V429_RS01160 PF00580 UvrD/REP helicase N-terminal domain V429_RS01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS01170 PF03466 LysR substrate binding domain V429_RS01180 PF14001 YdfZ protein V429_RS01205 PF06206 CpeT/CpcT family (DUF1001) V429_RS01215 PF01810 LysE type translocator V429_RS01220 PF04143 Sulphur transport V429_RS01225 PF00690 Cation transporter/ATPase, N-terminus V429_RS01225 PF00689 Cation transporting ATPase, C-terminus V429_RS01230 PF01810 LysE type translocator V429_RS01235 PF12833 Helix-turn-helix domain V429_RS01240 PF00892 EamA-like transporter family V429_RS01245 PF00171 Aldehyde dehydrogenase family V429_RS01250 PF01381 Helix-turn-helix V429_RS01250 PF07883 Cupin domain V429_RS01255 PF00202 Aminotransferase class-III V429_RS01265 PF00958 GMP synthase C terminal domain V429_RS01265 PF02540 NAD synthase V429_RS01265 PF00117 Glutamine amidotransferase class-I V429_RS01270 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V429_RS01270 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V429_RS01275 PF00294 pfkB family carbohydrate kinase V429_RS01280 PF02082 Transcriptional regulator V429_RS01295 PF02646 RmuC family V429_RS01300 PF02386 Cation transport protein V429_RS01305 PF02080 TrkA-C domain V429_RS01305 PF02254 TrkA-N domain V429_RS01310 PF01189 16S rRNA methyltransferase RsmB/F V429_RS01310 PF01029 NusB family V429_RS01315 PF02911 Formyl transferase, C-terminal domain V429_RS01315 PF00551 Formyl transferase V429_RS01320 PF01327 Polypeptide deformylase V429_RS01330 PF17782 DprA winged helix domain V429_RS01330 PF02481 DNA recombination-mediator protein A V429_RS01335 PF04361 Protein of unknown function (DUF494) V429_RS01340 PF01396 Topoisomerase DNA binding C4 zinc finger V429_RS01345 PF00731 AIR carboxylase V429_RS01350 PF01300 Telomere recombination V429_RS01355 PF01218 Coproporphyrinogen III oxidase V429_RS01360 PF08501 Shikimate dehydrogenase substrate binding domain V429_RS01360 PF01488 Shikimate / quinate 5-dehydrogenase V429_RS01360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain V429_RS01365 PF07369 Protein of unknown function (DUF1488) V429_RS01370 PF01926 50S ribosome-binding GTPase V429_RS01375 PF00034 Cytochrome c V429_RS01385 PF04220 Der GTPase activator (YihI) V429_RS01390 PF10675 Protein of unknown function (DUF2489) V429_RS01395 PF04055 Radical SAM superfamily V429_RS01395 PF06969 HemN C-terminal domain V429_RS01400 PF00962 Adenosine/AMP deaminase V429_RS01405 PF00072 Response regulator receiver domain V429_RS01405 PF00158 Sigma-54 interaction domain V429_RS01405 PF02954 Bacterial regulatory protein, Fis family V429_RS01410 PF00989 PAS fold V429_RS01410 PF00512 His Kinase A (phospho-acceptor) domain V429_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS01420 PF03951 Glutamine synthetase, beta-Grasp domain V429_RS01420 PF00120 Glutamine synthetase, catalytic domain V429_RS01425 PF00009 Elongation factor Tu GTP binding domain V429_RS01425 PF00679 Elongation factor G C-terminus V429_RS01425 PF03144 Elongation factor Tu domain 2 V429_RS01430 PF03631 Virulence factor BrkB V429_RS01435 PF02580 D-Tyr-tRNA(Tyr) deacylase V429_RS01445 PF00583 Acetyltransferase (GNAT) family V429_RS01445 PF09500 Putative thioesterase (yiiD_Cterm) V429_RS01455 PF00271 Helicase conserved C-terminal domain V429_RS01455 PF00270 DEAD/DEAH box helicase V429_RS01455 PF17191 RecG wedge domain V429_RS01460 PF13091 PLD-like domain V429_RS01465 PF02447 GntP family permease V429_RS01470 PF01202 Shikimate kinase V429_RS01475 PF00920 Dehydratase family V429_RS01480 PF01081 KDPG and KHG aldolase V429_RS01485 PF00356 Bacterial regulatory proteins, lacI family V429_RS01485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS01495 PF01551 Peptidase family M23 V429_RS01500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) V429_RS01500 PF01676 Metalloenzyme superfamily V429_RS01505 PF00581 Rhodanese-like domain V429_RS01510 PF02556 Preprotein translocase subunit SecB V429_RS01515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus V429_RS01515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus V429_RS01520 PF01106 NifU-like domain V429_RS01520 PF01521 Iron-sulphur cluster biosynthesis V429_RS01525 PF00156 Phosphoribosyl transferase domain V429_RS01530 PF00561 alpha/beta hydrolase fold V429_RS01550 PF17674 HHH domain V429_RS01550 PF00575 S1 RNA binding domain V429_RS01550 PF16921 Tex protein YqgF-like domain V429_RS01550 PF09371 Tex-like protein N-terminal domain V429_RS01555 PF03449 Transcription elongation factor, N-terminal V429_RS01555 PF01272 Transcription elongation factor, GreA/GreB, C-term V429_RS01560 PF00072 Response regulator receiver domain V429_RS01560 PF00486 Transcriptional regulatory protein, C terminal V429_RS01565 PF00672 HAMP domain V429_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS01565 PF00512 His Kinase A (phospho-acceptor) domain V429_RS01575 PF00338 Ribosomal protein S10p/S20e V429_RS01580 PF00297 Ribosomal protein L3 V429_RS01585 PF00573 Ribosomal protein L4/L1 family V429_RS01590 PF00276 Ribosomal protein L23 V429_RS01595 PF00181 Ribosomal Proteins L2, RNA binding domain V429_RS01595 PF03947 Ribosomal Proteins L2, C-terminal domain V429_RS01600 PF00203 Ribosomal protein S19 V429_RS01605 PF00237 Ribosomal protein L22p/L17e V429_RS01610 PF07650 KH domain V429_RS01610 PF00189 Ribosomal protein S3, C-terminal domain V429_RS01615 PF00252 Ribosomal protein L16p/L10e V429_RS01620 PF00831 Ribosomal L29 protein V429_RS01625 PF00366 Ribosomal protein S17 V429_RS01630 PF00238 Ribosomal protein L14p/L23e V429_RS01635 PF00467 KOW motif V429_RS01635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 V429_RS01640 PF00281 Ribosomal protein L5 V429_RS01640 PF00673 ribosomal L5P family C-terminus V429_RS01645 PF00253 Ribosomal protein S14p/S29e V429_RS01650 PF00410 Ribosomal protein S8 V429_RS01655 PF00347 Ribosomal protein L6 V429_RS01660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast V429_RS01665 PF00333 Ribosomal protein S5, N-terminal domain V429_RS01665 PF03719 Ribosomal protein S5, C-terminal domain V429_RS01670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A V429_RS01675 PF00344 SecY translocase V429_RS01680 PF00416 Ribosomal protein S13/S18 V429_RS01685 PF00411 Ribosomal protein S11 V429_RS01690 PF01479 S4 domain V429_RS01690 PF00163 Ribosomal protein S4/S9 N-terminal domain V429_RS01695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain V429_RS01695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain V429_RS01695 PF01000 RNA polymerase Rpb3/RpoA insert domain V429_RS01740 PF02254 TrkA-N domain V429_RS01740 PF00999 Sodium/hydrogen exchanger family V429_RS01745 PF02525 Flavodoxin-like fold V429_RS01750 PF03466 LysR substrate binding domain V429_RS01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS01755 PF00106 short chain dehydrogenase V429_RS01770 PF00326 Prolyl oligopeptidase family V429_RS01770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V429_RS01785 PF07947 YhhN family V429_RS01790 PF07690 Major Facilitator Superfamily V429_RS01795 PF13533 Biotin-lipoyl like V429_RS01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS01800 PF03466 LysR substrate binding domain V429_RS01810 PF00375 Sodium:dicarboxylate symporter family V429_RS01815 PF10678 Protein of unknown function (DUF2492) V429_RS01820 PF01914 MarC family integral membrane protein V429_RS01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS01825 PF03466 LysR substrate binding domain V429_RS01830 PF02416 mttA/Hcf106 family V429_RS01840 PF01464 Transglycosylase SLT domain V429_RS01845 PF13091 PLD-like domain V429_RS01855 PF00440 Bacterial regulatory proteins, tetR family V429_RS01875 PF02881 SRP54-type protein, helical bundle domain V429_RS01875 PF00448 SRP54-type protein, GTPase domain V429_RS01880 PF00005 ABC transporter V429_RS01885 PF18075 FtsX extracellular domain V429_RS01890 PF04542 Sigma-70 region 2 V429_RS01890 PF04545 Sigma-70, region 4 V429_RS01890 PF00140 Sigma-70 factor, region 1.2 V429_RS01895 PF00484 Carbonic anhydrase V429_RS01900 PF07702 UTRA domain V429_RS01900 PF00392 Bacterial regulatory proteins, gntR family V429_RS01905 PF01979 Amidohydrolase family V429_RS01910 PF00491 Arginase family V429_RS01915 PF17391 Urocanase N-terminal domain V429_RS01915 PF17392 Urocanase C-terminal domain V429_RS01915 PF01175 Urocanase Rossmann-like domain V429_RS01920 PF00221 Aromatic amino acid lyase V429_RS01925 PF01699 Sodium/calcium exchanger protein V429_RS01930 PF00563 EAL domain V429_RS01930 PF12792 CSS motif domain associated with EAL V429_RS01935 PF17157 Gammaproteobacterial periplasmic sensor domain V429_RS01935 PF00563 EAL domain V429_RS01935 PF00990 Diguanylate cyclase, GGDEF domain V429_RS01965 PF03958 Bacterial type II/III secretion system short domain V429_RS01965 PF00263 Bacterial type II and III secretion system protein V429_RS01970 PF09077 Mu B transposition protein, C terminal V429_RS01970 PF13401 AAA domain V429_RS01980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V429_RS01980 PF00437 Type II/IV secretion system protein V429_RS01985 PF00482 Type II secretion system (T2SS), protein F V429_RS01995 PF07963 Prokaryotic N-terminal methylation motif V429_RS02000 PF00114 Pilin (bacterial filament) V429_RS02000 PF07963 Prokaryotic N-terminal methylation motif V429_RS02005 PF14245 Type IV pilin PilA V429_RS02005 PF07963 Prokaryotic N-terminal methylation motif V429_RS02035 PF04085 rod shape-determining protein MreC V429_RS02040 PF04093 rod shape-determining protein MreD V429_RS02045 PF02545 Maf-like protein V429_RS02050 PF10150 Ribonuclease E/G family V429_RS02050 PF00575 S1 RNA binding domain V429_RS02055 PF13502 AsmA-like C-terminal region V429_RS02055 PF13116 Protein of unknown function V429_RS02065 PF00795 Carbon-nitrogen hydrolase V429_RS02070 PF01523 Putative modulator of DNA gyrase V429_RS02075 PF01380 SIS domain V429_RS02075 PF01418 Helix-turn-helix domain, rpiR family V429_RS02090 PF00367 phosphotransferase system, EIIB V429_RS02090 PF02378 Phosphotransferase system, EIIC V429_RS02095 PF13580 SIS domain V429_RS02105 PF01914 MarC family integral membrane protein V429_RS02110 PF07690 Major Facilitator Superfamily V429_RS02120 PF00072 Response regulator receiver domain V429_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS02125 PF00512 His Kinase A (phospho-acceptor) domain V429_RS02125 PF01627 Hpt domain V429_RS02125 PF00072 Response regulator receiver domain V429_RS02125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V429_RS02125 PF00672 HAMP domain V429_RS02130 PF13581 Histidine kinase-like ATPase domain V429_RS02135 PF01740 STAS domain V429_RS02135 PF08678 Rsbr N terminal V429_RS02140 PF08447 PAS fold V429_RS02140 PF13426 PAS domain V429_RS02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS02155 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) V429_RS02160 PF04228 Putative neutral zinc metallopeptidase V429_RS02170 PF08668 HDOD domain V429_RS02195 PF00419 Fimbrial protein V429_RS02215 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain V429_RS02215 PF02753 Pili assembly chaperone PapD, C-terminal domain V429_RS02220 PF00577 Outer membrane usher protein V429_RS02220 PF13954 PapC N-terminal domain V429_RS02220 PF13953 PapC C-terminal domain V429_RS02225 PF01389 OmpA-like transmembrane domain V429_RS02225 PF00691 OmpA family V429_RS02230 PF00419 Fimbrial protein V429_RS02235 PF04320 Protein with unknown function (DUF469) V429_RS02265 PF00999 Sodium/hydrogen exchanger family V429_RS02270 PF00809 Pterin binding enzyme V429_RS02270 PF02574 Homocysteine S-methyltransferase V429_RS02270 PF02310 B12 binding domain V429_RS02270 PF02607 B12 binding domain V429_RS02270 PF02965 Vitamin B12 dependent methionine synthase, activation domain V429_RS02275 PF18030 RimK PreATP-grasp domain V429_RS02275 PF08443 RimK-like ATP-grasp domain V429_RS02280 PF05525 Branched-chain amino acid transport protein V429_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS02290 PF00072 Response regulator receiver domain V429_RS02290 PF00486 Transcriptional regulatory protein, C terminal V429_RS02305 PF03440 Aerolysin/Pertussis toxin (APT) domain V429_RS02305 PF01117 Aerolysin toxin V429_RS02310 PF13667 ThiC-associated domain V429_RS02310 PF01964 Radical SAM ThiC family V429_RS02315 PF02581 Thiamine monophosphate synthase V429_RS02320 PF00899 ThiF family V429_RS02330 PF05690 Thiazole biosynthesis protein ThiG V429_RS02335 PF04055 Radical SAM superfamily V429_RS02335 PF06968 Biotin and Thiamin Synthesis associated domain V429_RS02345 PF13036 Peptidoglycan-synthase activator LpoB V429_RS02360 PF17151 Periplasmic sensor domain V429_RS02360 PF00990 Diguanylate cyclase, GGDEF domain V429_RS02370 PF06055 Exopolysaccharide synthesis, ExoD V429_RS02385 PF08803 Putative mono-oxygenase ydhR V429_RS02390 PF01638 HxlR-like helix-turn-helix V429_RS02415 PF00593 TonB dependent receptor V429_RS02415 PF07715 TonB-dependent Receptor Plug Domain V429_RS02430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded V429_RS02435 PF03692 Putative zinc- or iron-chelating domain V429_RS02445 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase V429_RS02450 PF02602 Uroporphyrinogen-III synthase HemD V429_RS02455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain V429_RS02455 PF03900 Porphobilinogen deaminase, C-terminal domain V429_RS02460 PF12633 Adenylate cyclase NT domain V429_RS02460 PF01295 Adenylate cyclase, class-I V429_RS02465 PF02230 Phospholipase/Carboxylesterase V429_RS02470 PF01491 Frataxin-like domain V429_RS02475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V429_RS02475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain V429_RS02480 PF01678 Diaminopimelate epimerase V429_RS02490 PF02899 Phage integrase, N-terminal SAM-like domain V429_RS02490 PF00589 Phage integrase family V429_RS02495 PF13419 Haloacid dehalogenase-like hydrolase V429_RS02505 PF13545 Crp-like helix-turn-helix domain V429_RS02505 PF00027 Cyclic nucleotide-binding domain V429_RS02515 PF07722 Peptidase C26 V429_RS02535 PF00005 ABC transporter V429_RS02550 PF02464 Competence-damaged protein V429_RS02550 PF00994 Probable molybdopterin binding domain V429_RS02555 PF00013 KH domain V429_RS02555 PF01966 HD domain V429_RS02555 PF12072 Domain of unknown function (DUF3552) V429_RS02560 PF04204 Homoserine O-succinyltransferase V429_RS02570 PF01037 Lrp/AsnC ligand binding domain V429_RS02575 PF00884 Sulfatase V429_RS02590 PF00128 Alpha amylase, catalytic domain V429_RS02590 PF02903 Alpha amylase, N-terminal ig-like domain V429_RS02590 PF16657 Maltogenic Amylase, C-terminal domain V429_RS02595 PF02308 MgtC family V429_RS02615 PF00106 short chain dehydrogenase V429_RS02620 PF03577 Peptidase family C69 V429_RS02635 PF00465 Iron-containing alcohol dehydrogenase V429_RS02645 PF01053 Cys/Met metabolism PLP-dependent enzyme V429_RS02650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS02650 PF12793 Sugar transport-related sRNA regulator N-term V429_RS02665 PF03280 Proteobacterial lipase chaperone protein V429_RS02670 PF00561 alpha/beta hydrolase fold V429_RS02680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V429_RS02680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V429_RS02685 PF02698 DUF218 domain V429_RS02690 PF08453 Peptidase family M9 N-terminal V429_RS02690 PF01752 Collagenase V429_RS02700 PF00419 Fimbrial protein V429_RS02710 PF13954 PapC N-terminal domain V429_RS02710 PF13953 PapC C-terminal domain V429_RS02710 PF00577 Outer membrane usher protein V429_RS02715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain V429_RS02715 PF02753 Pili assembly chaperone PapD, C-terminal domain V429_RS02720 PF00419 Fimbrial protein V429_RS02725 PF00419 Fimbrial protein V429_RS02735 PF00501 AMP-binding enzyme V429_RS02740 PF13378 Enolase C-terminal domain-like V429_RS02745 PF00378 Enoyl-CoA hydratase/isomerase V429_RS02750 PF12697 Alpha/beta hydrolase family V429_RS02755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V429_RS02755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS02755 PF16582 Middle domain of thiamine pyrophosphate V429_RS02760 PF00425 chorismate binding enzyme V429_RS02765 PF01040 UbiA prenyltransferase family V429_RS02790 PF03880 DbpA RNA binding domain V429_RS02790 PF00271 Helicase conserved C-terminal domain V429_RS02790 PF00270 DEAD/DEAH box helicase V429_RS02795 PF07662 Na+ dependent nucleoside transporter C-terminus V429_RS02795 PF01773 Na+ dependent nucleoside transporter N-terminus V429_RS02795 PF07670 Nucleoside recognition V429_RS02800 PF04307 LexA-binding, inner membrane-associated putative hydrolase V429_RS02815 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 V429_RS02820 PF01544 CorA-like Mg2+ transporter protein V429_RS02840 PF03471 Transporter associated domain V429_RS02840 PF00999 Sodium/hydrogen exchanger family V429_RS02840 PF02080 TrkA-C domain V429_RS02845 PF05068 Mannitol repressor V429_RS02850 PF08125 Mannitol dehydrogenase C-terminal domain V429_RS02850 PF01232 Mannitol dehydrogenase Rossmann domain V429_RS02855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS02855 PF02378 Phosphotransferase system, EIIC V429_RS02855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V429_RS02865 PF00440 Bacterial regulatory proteins, tetR family V429_RS02870 PF00773 RNB domain V429_RS02870 PF08206 Ribonuclease B OB domain V429_RS02870 PF17876 Cold shock domain V429_RS02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS02875 PF03466 LysR substrate binding domain V429_RS02880 PF00765 Autoinducer synthase V429_RS02885 PF03472 Autoinducer binding domain V429_RS02885 PF00196 Bacterial regulatory proteins, luxR family V429_RS02890 PF01810 LysE type translocator V429_RS02895 PF02872 5'-nucleotidase, C-terminal domain V429_RS02895 PF00149 Calcineurin-like phosphoesterase V429_RS02900 PF05433 Glycine zipper 2TM domain V429_RS02905 PF00583 Acetyltransferase (GNAT) family V429_RS02910 PF11756 Nitrous oxide-stimulated promoter V429_RS02915 PF01321 Creatinase/Prolidase N-terminal domain V429_RS02915 PF00557 Metallopeptidase family M24 V429_RS02920 PF00392 Bacterial regulatory proteins, gntR family V429_RS02925 PF01293 Phosphoenolpyruvate carboxykinase V429_RS02930 PF01430 Hsp33 protein V429_RS02935 PF01479 S4 domain V429_RS02940 PF11356 Type II secretion system protein C V429_RS02945 PF03958 Bacterial type II/III secretion system short domain V429_RS02945 PF00263 Bacterial type II and III secretion system protein V429_RS02950 PF00437 Type II/IV secretion system protein V429_RS02955 PF00482 Type II secretion system (T2SS), protein F V429_RS02960 PF08334 Type II secretion system (T2SS), protein G V429_RS02960 PF07963 Prokaryotic N-terminal methylation motif V429_RS02965 PF07963 Prokaryotic N-terminal methylation motif V429_RS02965 PF12019 Type II transport protein GspH V429_RS02970 PF02501 Type II secretion system (T2SS), protein I V429_RS02970 PF07963 Prokaryotic N-terminal methylation motif V429_RS02975 PF11612 Type II secretion system (T2SS), protein J V429_RS02975 PF07963 Prokaryotic N-terminal methylation motif V429_RS02980 PF03934 Type II secretion system (T2SS), protein K V429_RS02985 PF05134 Type II secretion system (T2SS), protein L V429_RS02985 PF12693 GspL periplasmic domain V429_RS02990 PF04612 Type II secretion system (T2SS), protein M V429_RS02995 PF01203 Type II secretion system (T2SS), protein N V429_RS03000 PF00196 Bacterial regulatory proteins, luxR family V429_RS03005 PF01479 S4 domain V429_RS03005 PF00579 tRNA synthetases class I (W and Y) V429_RS03010 PF13419 Haloacid dehalogenase-like hydrolase V429_RS03015 PF00293 NUDIX domain V429_RS03020 PF00459 Inositol monophosphatase family V429_RS03025 PF03222 Tryptophan/tyrosine permease family V429_RS03030 PF01588 Putative tRNA binding domain V429_RS03035 PF06445 GyrI-like small molecule binding domain V429_RS03035 PF12833 Helix-turn-helix domain V429_RS03040 PF01340 Met Apo-repressor, MetJ V429_RS03045 PF01053 Cys/Met metabolism PLP-dependent enzyme V429_RS03050 PF03447 Homoserine dehydrogenase, NAD binding domain V429_RS03050 PF00742 Homoserine dehydrogenase V429_RS03050 PF00696 Amino acid kinase family V429_RS03060 PF00311 Phosphoenolpyruvate carboxylase V429_RS03065 PF01546 Peptidase family M20/M25/M40 V429_RS03065 PF07687 Peptidase dimerisation domain V429_RS03070 PF02774 Semialdehyde dehydrogenase, dimerisation domain V429_RS03070 PF01118 Semialdehyde dehydrogenase, NAD binding domain V429_RS03075 PF00696 Amino acid kinase family V429_RS03080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V429_RS03080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V429_RS03085 PF00764 Arginosuccinate synthase V429_RS03090 PF00206 Lyase V429_RS03090 PF14698 Argininosuccinate lyase C-terminal V429_RS03115 PF14602 Hexapeptide repeat of succinyl-transferase V429_RS03115 PF12464 Maltose acetyltransferase V429_RS03120 PF13194 Domain of unknown function (DUF4010) V429_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03140 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03145 PF12857 TOBE-like domain V429_RS03145 PF00005 ABC transporter V429_RS03150 PF03466 LysR substrate binding domain V429_RS03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03155 PF18416 N-acetylglucosamine binding protein domain 2 V429_RS03155 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading V429_RS03160 PF12729 Four helix bundle sensory module for signal transduction V429_RS03160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS03160 PF00672 HAMP domain V429_RS03190 PF14685 Tricorn protease PDZ domain V429_RS03190 PF14684 Tricorn protease C1 domain V429_RS03190 PF03572 Peptidase family S41 V429_RS03190 PF07676 WD40-like Beta Propeller Repeat V429_RS03210 PF11230 Protein of unknown function (DUF3029) V429_RS03215 PF04055 Radical SAM superfamily V429_RS03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03225 PF03466 LysR substrate binding domain V429_RS03230 PF00155 Aminotransferase class I and II V429_RS03235 PF02583 Metal-sensitive transcriptional repressor V429_RS03250 PF11852 Domain of unknown function (DUF3372) V429_RS03250 PF03714 Bacterial pullanase-associated domain V429_RS03250 PF18494 Pullulanase Ins domain V429_RS03250 PF17967 Pullulanase N2 domain V429_RS03250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V429_RS03255 PF00403 Heavy-metal-associated domain V429_RS03260 PF08534 Redoxin V429_RS03270 PF00270 DEAD/DEAH box helicase V429_RS03270 PF00271 Helicase conserved C-terminal domain V429_RS03285 PF03372 Endonuclease/Exonuclease/phosphatase family V429_RS03290 PF08447 PAS fold V429_RS03290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS03305 PF06062 Uncharacterised protein family (UPF0231) V429_RS03310 PF13556 PucR C-terminal helix-turn-helix domain V429_RS03310 PF17853 GGDEF-like domain V429_RS03310 PF05651 Putative sugar diacid recognition V429_RS03315 PF02447 GntP family permease V429_RS03320 PF02595 Glycerate kinase family V429_RS03330 PF00255 Glutathione peroxidase V429_RS03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03335 PF03466 LysR substrate binding domain V429_RS03340 PF07662 Na+ dependent nucleoside transporter C-terminus V429_RS03340 PF01773 Na+ dependent nucleoside transporter N-terminus V429_RS03340 PF07670 Nucleoside recognition V429_RS03345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V429_RS03345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V429_RS03350 PF00472 RF-1 domain V429_RS03355 PF00543 Nitrogen regulatory protein P-II V429_RS03360 PF13416 Bacterial extracellular solute-binding protein V429_RS03370 PF08402 TOBE domain V429_RS03370 PF00005 ABC transporter V429_RS03375 PF04261 Dyp-type peroxidase family V429_RS03380 PF01316 Arginine repressor, DNA binding domain V429_RS03380 PF02863 Arginine repressor, C-terminal domain V429_RS03385 PF00005 ABC transporter V429_RS03390 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS03395 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03400 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain V429_RS03405 PF00056 lactate/malate dehydrogenase, NAD binding domain V429_RS03410 PF08238 Sel1 repeat V429_RS03415 PF00042 Globin V429_RS03415 PF00970 Oxidoreductase FAD-binding domain V429_RS03415 PF00175 Oxidoreductase NAD-binding domain V429_RS03420 PF02082 Transcriptional regulator V429_RS03425 PF00571 CBS domain V429_RS03425 PF01595 Cyclin M transmembrane N-terminal domain V429_RS03425 PF03471 Transporter associated domain V429_RS03430 PF01578 Cytochrome C assembly protein V429_RS03435 PF02881 SRP54-type protein, helical bundle domain V429_RS03435 PF02978 Signal peptide binding domain V429_RS03435 PF00448 SRP54-type protein, GTPase domain V429_RS03440 PF00886 Ribosomal protein S16 V429_RS03445 PF05239 PRC-barrel domain V429_RS03445 PF01782 RimM N-terminal domain V429_RS03450 PF01746 tRNA (Guanine-1)-methyltransferase V429_RS03455 PF01245 Ribosomal protein L19 V429_RS03465 PF02976 DNA mismatch repair enzyme MutH V429_RS03470 PF00293 NUDIX domain V429_RS03475 PF02896 PEP-utilising enzyme, TIM barrel domain V429_RS03475 PF00391 PEP-utilising enzyme, mobile domain V429_RS03475 PF01590 GAF domain V429_RS03475 PF05524 PEP-utilising enzyme, N-terminal V429_RS03480 PF01790 Prolipoprotein diacylglyceryl transferase V429_RS03485 PF00303 Thymidylate synthase V429_RS03490 PF06965 Na+/H+ antiporter 1 V429_RS03500 PF03466 LysR substrate binding domain V429_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03505 PF01022 Bacterial regulatory protein, arsR family V429_RS03510 PF01649 Ribosomal protein S20 V429_RS03515 PF03023 Lipid II flippase MurJ V429_RS03520 PF06574 FAD synthetase V429_RS03520 PF01687 Riboflavin kinase V429_RS03525 PF06827 Zinc finger found in FPG and IleRS V429_RS03525 PF08264 Anticodon-binding domain of tRNA V429_RS03525 PF00133 tRNA synthetases class I (I, L, M and V) V429_RS03530 PF01252 Signal peptidase (SPase) II V429_RS03535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS03540 PF02401 LytB protein V429_RS03545 PF07963 Prokaryotic N-terminal methylation motif V429_RS03545 PF12019 Type II transport protein GspH V429_RS03565 PF05567 Neisseria PilC beta-propeller domain V429_RS03600 PF00795 Carbon-nitrogen hydrolase V429_RS03600 PF02540 NAD synthase V429_RS03605 PF00543 Nitrogen regulatory protein P-II V429_RS03615 PF02664 S-Ribosylhomocysteinase (LuxS) V429_RS03620 PF00990 Diguanylate cyclase, GGDEF domain V429_RS03625 PF08206 Ribonuclease B OB domain V429_RS03625 PF00773 RNB domain V429_RS03625 PF00575 S1 RNA binding domain V429_RS03625 PF08461 Ribonuclease R winged-helix domain V429_RS03625 PF17876 Cold shock domain V429_RS03630 PF08032 RNA 2'-O ribose methyltransferase substrate binding V429_RS03630 PF00588 SpoU rRNA Methylase family V429_RS03640 PF13673 Acetyltransferase (GNAT) domain V429_RS03660 PF01566 Natural resistance-associated macrophage protein V429_RS03665 PF01250 Ribosomal protein S6 V429_RS03670 PF01084 Ribosomal protein S18 V429_RS03675 PF01281 Ribosomal protein L9, N-terminal domain V429_RS03675 PF03948 Ribosomal protein L9, C-terminal domain V429_RS03680 PF00175 Oxidoreductase NAD-binding domain V429_RS03680 PF00970 Oxidoreductase FAD-binding domain V429_RS03695 PF14765 Polyketide synthase dehydratase V429_RS03695 PF08659 KR domain V429_RS03695 PF16197 Ketoacyl-synthetase C-terminal extension V429_RS03695 PF00698 Acyl transferase domain V429_RS03695 PF00109 Beta-ketoacyl synthase, N-terminal domain V429_RS03695 PF08240 Alcohol dehydrogenase GroES-like domain V429_RS03695 PF02801 Beta-ketoacyl synthase, C-terminal domain V429_RS03695 PF00550 Phosphopantetheine attachment site V429_RS03695 PF08990 Erythronolide synthase docking V429_RS03700 PF09335 SNARE associated Golgi protein V429_RS03705 PF00675 Insulinase (Peptidase family M16) V429_RS03705 PF05193 Peptidase M16 inactive domain V429_RS03710 PF04262 Glutamate-cysteine ligase V429_RS03720 PF00501 AMP-binding enzyme V429_RS03730 PF00583 Acetyltransferase (GNAT) family V429_RS03740 PF17868 AAA lid domain V429_RS03740 PF07728 AAA domain (dynein-related subfamily) V429_RS03740 PF12592 Protein of unknown function (DUF3763) V429_RS03745 PF05762 VWA domain containing CoxE-like protein V429_RS03750 PF00990 Diguanylate cyclase, GGDEF domain V429_RS03755 PF00990 Diguanylate cyclase, GGDEF domain V429_RS03755 PF00072 Response regulator receiver domain V429_RS03760 PF03144 Elongation factor Tu domain 2 V429_RS03760 PF00009 Elongation factor Tu GTP binding domain V429_RS03760 PF16658 Class II release factor RF3, C-terminal domain V429_RS03785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V429_RS03795 PF03466 LysR substrate binding domain V429_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03800 PF04371 Porphyromonas-type peptidyl-arginine deiminase V429_RS03805 PF01425 Amidase V429_RS03810 PF00753 Metallo-beta-lactamase superfamily V429_RS03820 PF00270 DEAD/DEAH box helicase V429_RS03820 PF00271 Helicase conserved C-terminal domain V429_RS03825 PF03466 LysR substrate binding domain V429_RS03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS03840 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase V429_RS03845 PF03150 Di-haem cytochrome c peroxidase V429_RS03845 PF00034 Cytochrome c V429_RS03860 PF00445 Ribonuclease T2 family V429_RS03870 PF03060 Nitronate monooxygenase V429_RS03900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain V429_RS03900 PF09297 NADH pyrophosphatase zinc ribbon domain V429_RS03900 PF00293 NUDIX domain V429_RS03905 PF00512 His Kinase A (phospho-acceptor) domain V429_RS03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS03905 PF00672 HAMP domain V429_RS03905 PF16527 Two-component sensor protein CpxA, periplasmic domain V429_RS03910 PF00486 Transcriptional regulatory protein, C terminal V429_RS03910 PF00072 Response regulator receiver domain V429_RS03915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS03920 PF00005 ABC transporter V429_RS03920 PF12704 MacB-like periplasmic core domain V429_RS03920 PF02687 FtsX-like permease family V429_RS03925 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS03930 PF00005 ABC transporter V429_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS03945 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS03950 PF00326 Prolyl oligopeptidase family V429_RS03950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V429_RS03970 PF03710 Glutamate-ammonia ligase adenylyltransferase V429_RS03970 PF08335 GlnD PII-uridylyltransferase V429_RS03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS03980 PF02743 Cache domain V429_RS03980 PF00672 HAMP domain V429_RS03985 PF00027 Cyclic nucleotide-binding domain V429_RS03985 PF00520 Ion transport protein V429_RS03990 PF08239 Bacterial SH3 domain V429_RS03995 PF00171 Aldehyde dehydrogenase family V429_RS03995 PF14850 DNA-binding domain of Proline dehydrogenase V429_RS03995 PF18327 Proline utilization A proline dehydrogenase N-terminal domain V429_RS03995 PF01619 Proline dehydrogenase V429_RS04000 PF09297 NADH pyrophosphatase zinc ribbon domain V429_RS04000 PF00293 NUDIX domain V429_RS04005 PF01208 Uroporphyrinogen decarboxylase (URO-D) V429_RS04010 PF00480 ROK family V429_RS04015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V429_RS04015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_RS04020 PF00162 Phosphoglycerate kinase V429_RS04025 PF01116 Fructose-bisphosphate aldolase class-II V429_RS04030 PF01266 FAD dependent oxidoreductase V429_RS04040 PF11412 Disulphide bond corrector protein DsbC V429_RS04040 PF02683 Cytochrome C biogenesis protein transmembrane region V429_RS04045 PF03091 CutA1 divalent ion tolerance protein V429_RS04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS04060 PF03466 LysR substrate binding domain V429_RS04065 PF01571 Aminomethyltransferase folate-binding domain V429_RS04070 PF03937 Flavinator of succinate dehydrogenase V429_RS04080 PF02910 Fumarate reductase flavoprotein C-term V429_RS04080 PF00890 FAD binding domain V429_RS04085 PF04542 Sigma-70 region 2 V429_RS04085 PF08281 Sigma-70, region 4 V429_RS04090 PF03873 Anti sigma-E protein RseA, C-terminal domain V429_RS04090 PF03872 Anti sigma-E protein RseA, N-terminal domain V429_RS04095 PF03888 MucB/RseB N-terminal domain V429_RS04095 PF17188 MucB/RseB C-terminal domain V429_RS04105 PF06421 GTP-binding protein LepA C-terminus V429_RS04105 PF03144 Elongation factor Tu domain 2 V429_RS04105 PF00009 Elongation factor Tu GTP binding domain V429_RS04105 PF00679 Elongation factor G C-terminus V429_RS04110 PF10502 Signal peptidase, peptidase S26 V429_RS04115 PF00035 Double-stranded RNA binding motif V429_RS04115 PF14622 Ribonuclease-III-like V429_RS04120 PF07650 KH domain V429_RS04120 PF01926 50S ribosome-binding GTPase V429_RS04125 PF11967 Recombination protein O N terminal V429_RS04125 PF02565 Recombination protein O C terminal V429_RS04130 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ V429_RS04140 PF01116 Fructose-bisphosphate aldolase class-II V429_RS04145 PF01979 Amidohydrolase family V429_RS04150 PF03610 PTS system fructose IIA component V429_RS04155 PF03613 PTS system mannose/fructose/sorbose family IID component V429_RS04160 PF03609 PTS system sorbose-specific iic component V429_RS04165 PF03830 PTS system sorbose subfamily IIB component V429_RS04170 PF01380 SIS domain V429_RS04175 PF08013 Tagatose 6 phosphate kinase V429_RS04180 PF00455 DeoR C terminal sensor domain V429_RS04180 PF08220 DeoR-like helix-turn-helix domain V429_RS04185 PF01510 N-acetylmuramoyl-L-alanine amidase V429_RS04190 PF07308 Protein of unknown function (DUF1456) V429_RS04195 PF00072 Response regulator receiver domain V429_RS04195 PF00512 His Kinase A (phospho-acceptor) domain V429_RS04195 PF01627 Hpt domain V429_RS04195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V429_RS04195 PF00672 HAMP domain V429_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS04200 PF05958 tRNA (Uracil-5-)-methyltransferase V429_RS04200 PF01938 TRAM domain V429_RS04205 PF02824 TGS domain V429_RS04205 PF04607 Region found in RelA / SpoT proteins V429_RS04205 PF13291 ACT domain V429_RS04210 PF03819 MazG nucleotide pyrophosphohydrolase domain V429_RS04215 PF00117 Glutamine amidotransferase class-I V429_RS04215 PF06418 CTP synthase N-terminus V429_RS04220 PF00113 Enolase, C-terminal TIM barrel domain V429_RS04220 PF03952 Enolase, N-terminal domain V429_RS04225 PF04977 Septum formation initiator V429_RS04230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase V429_RS04235 PF02542 YgbB family V429_RS04240 PF01142 tRNA pseudouridine synthase D (TruD) V429_RS04245 PF01975 Survival protein SurE V429_RS04255 PF09335 SNARE associated Golgi protein V429_RS04260 PF01476 LysM domain V429_RS04260 PF01551 Peptidase family M23 V429_RS04265 PF00140 Sigma-70 factor, region 1.2 V429_RS04265 PF04542 Sigma-70 region 2 V429_RS04265 PF04539 Sigma-70 region 3 V429_RS04265 PF04545 Sigma-70, region 4 V429_RS04270 PF00814 Glycoprotease family V429_RS04275 PF09424 Yqey-like protein V429_RS04280 PF08275 DNA primase catalytic core, N-terminal domain V429_RS04280 PF10410 DnaB-helicase binding domain of primase V429_RS04280 PF01807 CHC2 zinc finger V429_RS04280 PF08278 DNA primase DnaG DnaB-binding V429_RS04285 PF04542 Sigma-70 region 2 V429_RS04285 PF00140 Sigma-70 factor, region 1.2 V429_RS04285 PF03979 Sigma-70 factor, region 1.1 V429_RS04285 PF04545 Sigma-70, region 4 V429_RS04285 PF04546 Sigma-70, non-essential region V429_RS04285 PF04539 Sigma-70 region 3 V429_RS04300 PF00128 Alpha amylase, catalytic domain V429_RS04315 PF02844 Phosphoribosylglycinamide synthetase, N domain V429_RS04315 PF02843 Phosphoribosylglycinamide synthetase, C domain V429_RS04315 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain V429_RS04320 PF02142 MGS-like domain V429_RS04320 PF01808 AICARFT/IMPCHase bienzyme V429_RS04325 PF13411 MerR HTH family regulatory protein V429_RS04330 PF01872 RibD C-terminal domain V429_RS04335 PF03889 Alternative ribosome-rescue factor A V429_RS04340 PF06969 HemN C-terminal domain V429_RS04340 PF04055 Radical SAM superfamily V429_RS04345 PF01725 Ham1 family V429_RS04350 PF07690 Major Facilitator Superfamily V429_RS04355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V429_RS04355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V429_RS04365 PF13302 Acetyltransferase (GNAT) domain V429_RS04375 PF02868 Thermolysin metallopeptidase, alpha-helical domain V429_RS04375 PF04151 Bacterial pre-peptidase C-terminal domain V429_RS04375 PF07504 Fungalysin/Thermolysin Propeptide Motif V429_RS04375 PF03413 Peptidase propeptide and YPEB domain V429_RS04375 PF01447 Thermolysin metallopeptidase, catalytic domain V429_RS04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS04380 PF03466 LysR substrate binding domain V429_RS04385 PF07690 Major Facilitator Superfamily V429_RS04390 PF00267 Gram-negative porin V429_RS04395 PF03605 Anaerobic c4-dicarboxylate membrane transporter V429_RS04400 PF00206 Lyase V429_RS04400 PF10415 Fumarase C C-terminus V429_RS04405 PF04186 FxsA cytoplasmic membrane protein V429_RS04410 PF01554 MatE V429_RS04415 PF00166 Chaperonin 10 Kd subunit V429_RS04420 PF00118 TCP-1/cpn60 chaperonin family V429_RS04430 PF00563 EAL domain V429_RS04430 PF03707 Bacterial signalling protein N terminal repeat V429_RS04430 PF13188 PAS domain V429_RS04430 PF00990 Diguanylate cyclase, GGDEF domain V429_RS04440 PF00849 RNA pseudouridylate synthase V429_RS04445 PF00271 Helicase conserved C-terminal domain V429_RS04445 PF12137 RNA polymerase recycling family C-terminal V429_RS04445 PF18339 RapA N-terminal Tudor like domain 1 V429_RS04445 PF18337 RapA N-terminal Tudor like domain V429_RS04445 PF00176 SNF2 family N-terminal domain V429_RS04475 PF08343 Ribonucleotide reductase N-terminal V429_RS04475 PF00317 Ribonucleotide reductase, all-alpha domain V429_RS04475 PF02867 Ribonucleotide reductase, barrel domain V429_RS04485 PF13638 PIN domain V429_RS04485 PF02562 PhoH-like protein V429_RS04490 PF00005 ABC transporter V429_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS04515 PF00694 Aconitase C-terminal domain V429_RS04520 PF00330 Aconitase family (aconitate hydratase) V429_RS04525 PF00180 Isocitrate/isopropylmalate dehydrogenase V429_RS04530 PF08502 LeuA allosteric (dimerisation) domain V429_RS04530 PF00682 HMGL-like V429_RS04540 PF01569 PAP2 superfamily V429_RS04550 PF00205 Thiamine pyrophosphate enzyme, central domain V429_RS04550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V429_RS04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS04555 PF10369 Small subunit of acetolactate synthase V429_RS04560 PF07085 DRTGG domain V429_RS04560 PF01515 Phosphate acetyl/butaryl transferase V429_RS04565 PF00871 Acetokinase family V429_RS04570 PF04217 Protein of unknown function, DUF412 V429_RS04575 PF03887 YfbU domain V429_RS04580 PF00578 AhpC/TSA family V429_RS04585 PF01842 ACT domain V429_RS04590 PF00701 Dihydrodipicolinate synthetase family V429_RS04595 PF06804 NlpB/DapX lipoprotein V429_RS04600 PF01259 SAICAR synthetase V429_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS04610 PF03466 LysR substrate binding domain V429_RS04615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) V429_RS04635 PF01627 Hpt domain V429_RS04635 PF00512 His Kinase A (phospho-acceptor) domain V429_RS04635 PF00072 Response regulator receiver domain V429_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS04635 PF18415 Histidine kinase receptor ArcB trans-membrane domain V429_RS04635 PF00989 PAS fold V429_RS04640 PF01966 HD domain V429_RS04640 PF13286 Phosphohydrolase-associated domain V429_RS04650 PF00512 His Kinase A (phospho-acceptor) domain V429_RS04650 PF09456 RcsC Alpha-Beta-Loop (ABL) V429_RS04650 PF00072 Response regulator receiver domain V429_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS04655 PF00563 EAL domain V429_RS04655 PF00990 Diguanylate cyclase, GGDEF domain V429_RS04655 PF03707 Bacterial signalling protein N terminal repeat V429_RS04660 PF12729 Four helix bundle sensory module for signal transduction V429_RS04660 PF00672 HAMP domain V429_RS04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS04665 PF02357 Transcription termination factor nusG V429_RS04670 PF03180 NLPA lipoprotein V429_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS04680 PF09383 NIL domain V429_RS04680 PF00005 ABC transporter V429_RS04695 PF00480 ROK family V429_RS04700 PF08331 Domain of unknown function (DUF1730) V429_RS04705 PF01256 Carbohydrate kinase V429_RS04705 PF03853 YjeF-related protein N-terminus V429_RS04710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE V429_RS04715 PF01520 N-acetylmuramoyl-L-alanine amidase V429_RS04720 PF01119 DNA mismatch repair protein, C-terminal domain V429_RS04720 PF08676 MutL C terminal dimerisation domain V429_RS04730 PF17209 Hfq protein V429_RS04735 PF16360 GTP-binding GTPase Middle Region V429_RS04735 PF01926 50S ribosome-binding GTPase V429_RS04735 PF13167 GTP-binding GTPase N-terminal V429_RS04740 PF01145 SPFH domain / Band 7 family V429_RS04740 PF12221 Bacterial membrane protein N terminal V429_RS04745 PF01145 SPFH domain / Band 7 family V429_RS04750 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) V429_RS04755 PF00348 Polyprenyl synthetase V429_RS04765 PF01016 Ribosomal L27 protein V429_RS04770 PF01018 GTP1/OBG V429_RS04770 PF01926 50S ribosome-binding GTPase V429_RS04775 PF07670 Nucleoside recognition V429_RS04780 PF00501 AMP-binding enzyme V429_RS04780 PF13193 AMP-binding enzyme C-terminal domain V429_RS04800 PF00296 Luciferase-like monooxygenase V429_RS04810 PF00149 Calcineurin-like phosphoesterase V429_RS04815 PF04379 ApaG domain V429_RS04820 PF00398 Ribosomal RNA adenine dimethylase V429_RS04825 PF04166 Pyridoxal phosphate biosynthetic protein PdxA V429_RS04830 PF09312 SurA N-terminal domain V429_RS04830 PF00639 PPIC-type PPIASE domain V429_RS04835 PF03968 OstA-like protein V429_RS04835 PF04453 LPS transport system D V429_RS04840 PF01636 Phosphotransferase enzyme family V429_RS04845 PF00483 Nucleotidyl transferase V429_RS04850 PF05099 Tellurite resistance protein TerB V429_RS04850 PF00226 DnaJ domain V429_RS04855 PF00860 Permease family V429_RS04865 PF00005 ABC transporter V429_RS04865 PF12848 ABC transporter V429_RS04870 PF00589 Phage integrase family V429_RS04870 PF12167 Arm DNA-binding domain V429_RS04995 PF01555 DNA methylase V429_RS05000 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS05040 PF03354 Phage Terminase V429_RS05055 PF01343 Peptidase family S49 V429_RS05150 PF01048 Phosphorylase superfamily V429_RS05155 PF01464 Transglycosylase SLT domain V429_RS05170 PF03466 LysR substrate binding domain V429_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS05175 PF01048 Phosphorylase superfamily V429_RS05180 PF07662 Na+ dependent nucleoside transporter C-terminus V429_RS05180 PF01773 Na+ dependent nucleoside transporter N-terminus V429_RS05180 PF07670 Nucleoside recognition V429_RS05185 PF01791 DeoC/LacD family aldolase V429_RS05195 PF01370 NAD dependent epimerase/dehydratase family V429_RS05205 PF00005 ABC transporter V429_RS05210 PF01032 FecCD transport family V429_RS05220 PF06228 Haem utilisation ChuX/HutX V429_RS05225 PF01243 Pyridoxamine 5'-phosphate oxidase V429_RS05245 PF00593 TonB dependent receptor V429_RS05245 PF07715 TonB-dependent Receptor Plug Domain V429_RS05250 PF12832 MFS_1 like family V429_RS05255 PF13443 Cro/C1-type HTH DNA-binding domain V429_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS05265 PF00512 His Kinase A (phospho-acceptor) domain V429_RS05265 PF00989 PAS fold V429_RS05270 PF08329 Chitinase A, N-terminal domain V429_RS05270 PF00704 Glycosyl hydrolases family 18 V429_RS05275 PF12561 ToxR activated gene A lipoprotein domain V429_RS05275 PF17945 Beta/Gamma crystallin V429_RS05280 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading V429_RS05280 PF18416 N-acetylglucosamine binding protein domain 2 V429_RS05285 PF13847 Methyltransferase domain V429_RS05290 PF13545 Crp-like helix-turn-helix domain V429_RS05290 PF00027 Cyclic nucleotide-binding domain V429_RS05295 PF02566 OsmC-like protein V429_RS05310 PF00485 Phosphoribulokinase / Uridine kinase family V429_RS05315 PF00893 Small Multidrug Resistance protein V429_RS05320 PF00892 EamA-like transporter family V429_RS05325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase V429_RS05330 PF01522 Polysaccharide deacetylase V429_RS05335 PF01370 NAD dependent epimerase/dehydratase family V429_RS05335 PF00551 Formyl transferase V429_RS05335 PF02911 Formyl transferase, C-terminal domain V429_RS05340 PF00535 Glycosyl transferase family 2 V429_RS05345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V429_RS05350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain V429_RS05350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain V429_RS05350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain V429_RS05355 PF06794 Uncharacterised protein family (UPF0270) V429_RS05360 PF01590 GAF domain V429_RS05360 PF00990 Diguanylate cyclase, GGDEF domain V429_RS05360 PF00563 EAL domain V429_RS05360 PF00360 Phytochrome region V429_RS05365 PF00561 alpha/beta hydrolase fold V429_RS05370 PF01584 CheW-like domain V429_RS05370 PF00072 Response regulator receiver domain V429_RS05380 PF09526 Probable metal-binding protein (DUF2387) V429_RS05385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS05390 PF04102 SlyX V429_RS05400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V429_RS05400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS05405 PF00072 Response regulator receiver domain V429_RS05405 PF00158 Sigma-54 interaction domain V429_RS05405 PF02954 Bacterial regulatory protein, Fis family V429_RS05425 PF00149 Calcineurin-like phosphoesterase V429_RS05425 PF02872 5'-nucleotidase, C-terminal domain V429_RS05430 PF00563 EAL domain V429_RS05430 PF12792 CSS motif domain associated with EAL V429_RS05440 PF03796 DnaB-like helicase C terminal domain V429_RS05440 PF00772 DnaB-like helicase N terminal domain V429_RS05445 PF00842 Alanine racemase, C-terminal domain V429_RS05445 PF01168 Alanine racemase, N-terminal domain V429_RS05450 PF12838 4Fe-4S dicluster domain V429_RS05455 PF01136 Peptidase family U32 V429_RS05455 PF16325 Peptidase family U32 C-terminal domain V429_RS05460 PF01590 GAF domain V429_RS05460 PF00989 PAS fold V429_RS05460 PF00563 EAL domain V429_RS05460 PF00990 Diguanylate cyclase, GGDEF domain V429_RS05485 PF00266 Aminotransferase class-V V429_RS05490 PF01339 CheB methylesterase V429_RS05490 PF00072 Response regulator receiver domain V429_RS05495 PF03975 CheD chemotactic sensory transduction V429_RS05500 PF03705 CheR methyltransferase, all-alpha domain V429_RS05500 PF01739 CheR methyltransferase, SAM binding domain V429_RS05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS05505 PF02203 Tar ligand binding domain homologue V429_RS05505 PF00672 HAMP domain V429_RS05510 PF01584 CheW-like domain V429_RS05515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS05515 PF12729 Four helix bundle sensory module for signal transduction V429_RS05515 PF00672 HAMP domain V429_RS05520 PF01584 CheW-like domain V429_RS05520 PF02895 Signal transducing histidine kinase, homodimeric domain V429_RS05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS05520 PF01627 Hpt domain V429_RS05520 PF07194 P2 response regulator binding domain V429_RS05530 PF00072 Response regulator receiver domain V429_RS05535 PF02743 Cache domain V429_RS05535 PF00672 HAMP domain V429_RS05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS05540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V429_RS05540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V429_RS05545 PF03466 LysR substrate binding domain V429_RS05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS05550 PF01810 LysE type translocator V429_RS05555 PF12392 Collagenase V429_RS05555 PF01136 Peptidase family U32 V429_RS05560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V429_RS05560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V429_RS05575 PF02074 Carboxypeptidase Taq (M32) metallopeptidase V429_RS05595 PF00106 short chain dehydrogenase V429_RS05600 PF03573 outer membrane porin, OprD family V429_RS05605 PF00672 HAMP domain V429_RS05605 PF02743 Cache domain V429_RS05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS05615 PF07995 Glucose / Sorbosone dehydrogenase V429_RS05620 PF00916 Sulfate permease family V429_RS05620 PF01740 STAS domain V429_RS05625 PF03976 Polyphosphate kinase 2 (PPK2) V429_RS05635 PF00872 Transposase, Mutator family V429_RS05640 PF13649 Methyltransferase domain V429_RS05650 PF00005 ABC transporter V429_RS05655 PF01032 FecCD transport family V429_RS05675 PF00158 Sigma-54 interaction domain V429_RS05675 PF01590 GAF domain V429_RS05700 PF00593 TonB dependent receptor V429_RS05700 PF07715 TonB-dependent Receptor Plug Domain V429_RS05720 PF00717 Peptidase S24-like V429_RS05725 PF18339 RapA N-terminal Tudor like domain 1 V429_RS05725 PF00176 SNF2 family N-terminal domain V429_RS05725 PF18337 RapA N-terminal Tudor like domain V429_RS05725 PF12137 RNA polymerase recycling family C-terminal V429_RS05725 PF00271 Helicase conserved C-terminal domain V429_RS05730 PF00271 Helicase conserved C-terminal domain V429_RS05730 PF00570 HRDC domain V429_RS05730 PF16124 RecQ zinc-binding V429_RS05730 PF09382 RQC domain V429_RS05730 PF00270 DEAD/DEAH box helicase V429_RS05750 PF09382 RQC domain V429_RS05750 PF16124 RecQ zinc-binding V429_RS05750 PF00570 HRDC domain V429_RS05750 PF00271 Helicase conserved C-terminal domain V429_RS05750 PF00270 DEAD/DEAH box helicase V429_RS05775 PF06508 Queuosine biosynthesis protein QueC V429_RS05780 PF04055 Radical SAM superfamily V429_RS05790 PF04002 RadC-like JAB domain V429_RS05830 PF09588 YqaJ-like viral recombinase domain V429_RS05860 PF00800 Prephenate dehydratase V429_RS05860 PF01817 Chorismate mutase type II V429_RS05890 PF08349 Protein of unknown function (DUF1722) V429_RS05895 PF13411 MerR HTH family regulatory protein V429_RS05900 PF00875 DNA photolyase V429_RS05900 PF03441 FAD binding domain of DNA photolyase V429_RS05910 PF00106 short chain dehydrogenase V429_RS05950 PF00210 Ferritin-like domain V429_RS05955 PF03063 Prismane/CO dehydrogenase family V429_RS05960 PF00175 Oxidoreductase NAD-binding domain V429_RS05960 PF00970 Oxidoreductase FAD-binding domain V429_RS05960 PF00042 Globin V429_RS05965 PF16363 GDP-mannose 4,6 dehydratase V429_RS05970 PF06965 Na+/H+ antiporter 1 V429_RS05970 PF13462 Thioredoxin V429_RS05980 PF03472 Autoinducer binding domain V429_RS05980 PF00196 Bacterial regulatory proteins, luxR family V429_RS05990 PF04717 Type VI secretion system, phage-baseplate injector V429_RS06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS06010 PF03466 LysR substrate binding domain V429_RS06015 PF03306 Alpha-acetolactate decarboxylase V429_RS06020 PF00205 Thiamine pyrophosphate enzyme, central domain V429_RS06020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS06020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V429_RS06025 PF01965 DJ-1/PfpI family V429_RS06030 PF02558 Ketopantoate reductase PanE/ApbA V429_RS06030 PF08546 Ketopantoate reductase PanE/ApbA C terminal V429_RS06035 PF04461 Protein of unknown function (DUF520) V429_RS06040 PF03502 Nucleoside-specific channel-forming protein, Tsx V429_RS06045 PF07690 Major Facilitator Superfamily V429_RS06055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V429_RS06065 PF05175 Methyltransferase small domain V429_RS06070 PF01722 BolA-like protein V429_RS06075 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) V429_RS06075 PF11973 NQRA C-terminal domain V429_RS06080 PF03116 NQR2, RnfD, RnfE family V429_RS06085 PF04205 FMN-binding domain V429_RS06090 PF02508 Rnf-Nqr subunit, membrane protein V429_RS06095 PF02508 Rnf-Nqr subunit, membrane protein V429_RS06100 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS06100 PF00970 Oxidoreductase FAD-binding domain V429_RS06100 PF00175 Oxidoreductase NAD-binding domain V429_RS06105 PF02424 ApbE family V429_RS06120 PF00817 impB/mucB/samB family V429_RS06120 PF11799 impB/mucB/samB family C-terminal domain V429_RS06120 PF11798 IMS family HHH motif V429_RS06125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS06125 PF00672 HAMP domain V429_RS06130 PF03466 LysR substrate binding domain V429_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS06140 PF04241 Protein of unknown function (DUF423) V429_RS06145 PF01728 FtsJ-like methyltransferase V429_RS06145 PF18125 RlmM ferredoxin-like domain V429_RS06155 PF00180 Isocitrate/isopropylmalate dehydrogenase V429_RS06155 PF18324 Hypothetical protein TT1725 V429_RS06160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V429_RS06160 PF01367 5'-3' exonuclease, C-terminal SAM fold V429_RS06165 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases V429_RS06165 PF03641 Possible lysine decarboxylase V429_RS06165 PF11892 Domain of unknown function (DUF3412) V429_RS06170 PF00990 Diguanylate cyclase, GGDEF domain V429_RS06180 PF14489 QueF-like protein V429_RS06180 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term V429_RS06185 PF07348 Syd protein (SUKH-2) V429_RS06190 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) V429_RS06215 PF04287 tRNA pseudouridine synthase C V429_RS06220 PF00849 RNA pseudouridylate synthase V429_RS06225 PF00258 Flavodoxin V429_RS06230 PF02264 LamB porin V429_RS06235 PF07148 Maltose operon periplasmic protein precursor (MalM) V429_RS06240 PF02378 Phosphotransferase system, EIIC V429_RS06240 PF00367 phosphotransferase system, EIIB V429_RS06245 PF11944 Protein of unknown function (DUF3461) V429_RS06250 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal V429_RS06250 PF14602 Hexapeptide repeat of succinyl-transferase V429_RS06250 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS06255 PF08335 GlnD PII-uridylyltransferase V429_RS06255 PF01842 ACT domain V429_RS06255 PF01966 HD domain V429_RS06255 PF01909 Nucleotidyltransferase domain V429_RS06260 PF00557 Metallopeptidase family M24 V429_RS06265 PF00318 Ribosomal protein S2 V429_RS06270 PF00889 Elongation factor TS V429_RS06275 PF00696 Amino acid kinase family V429_RS06280 PF01765 Ribosome recycling factor V429_RS06285 PF01255 Putative undecaprenyl diphosphate synthase V429_RS06295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain V429_RS06295 PF13288 DXP reductoisomerase C-terminal domain V429_RS06295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase V429_RS06300 PF02163 Peptidase family M50 V429_RS06300 PF17820 PDZ domain V429_RS06305 PF01103 Surface antigen V429_RS06305 PF07244 Surface antigen variable number repeat V429_RS06310 PF03938 Outer membrane protein (OmpH-like) V429_RS06315 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD V429_RS06315 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS06320 PF07977 FabA-like domain V429_RS06325 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS06325 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 V429_RS06330 PF02684 Lipid-A-disaccharide synthetase V429_RS06335 PF01351 Ribonuclease HII V429_RS06340 PF07733 Bacterial DNA polymerase III alpha NTPase domain V429_RS06340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain V429_RS06340 PF14579 Helix-hairpin-helix motif V429_RS06340 PF02811 PHP domain V429_RS06340 PF01336 OB-fold nucleic acid binding domain V429_RS06345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit V429_RS06350 PF18500 CadC C-terminal domain 1 V429_RS06350 PF00486 Transcriptional regulatory protein, C terminal V429_RS06355 PF13520 Amino acid permease V429_RS06360 PF01276 Orn/Lys/Arg decarboxylase, major domain V429_RS06360 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain V429_RS06360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain V429_RS06365 PF08543 Phosphomethylpyrimidine kinase V429_RS06375 PF03466 LysR substrate binding domain V429_RS06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS06385 PF12706 Beta-lactamase superfamily domain V429_RS06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS06390 PF03466 LysR substrate binding domain V429_RS06395 PF13520 Amino acid permease V429_RS06400 PF13302 Acetyltransferase (GNAT) domain V429_RS06405 PF00005 ABC transporter V429_RS06405 PF16326 ABC transporter C-terminal domain V429_RS06405 PF12848 ABC transporter V429_RS06415 PF01431 Peptidase family M13 V429_RS06415 PF05649 Peptidase family M13 V429_RS06420 PF01171 PP-loop family V429_RS06420 PF09179 TilS substrate binding domain V429_RS06420 PF11734 TilS substrate C-terminal domain V429_RS06425 PF00990 Diguanylate cyclase, GGDEF domain V429_RS06430 PF02254 TrkA-N domain V429_RS06430 PF00999 Sodium/hydrogen exchanger family V429_RS06430 PF02080 TrkA-C domain V429_RS06450 PF00196 Bacterial regulatory proteins, luxR family V429_RS06450 PF00072 Response regulator receiver domain V429_RS06460 PF00128 Alpha amylase, catalytic domain V429_RS06475 PF00535 Glycosyl transferase family 2 V429_RS06490 PF03734 L,D-transpeptidase catalytic domain V429_RS06490 PF01471 Putative peptidoglycan binding domain V429_RS06495 PF05951 Bacterial protein of unknown function (DUF882) V429_RS06505 PF03458 UPF0126 domain V429_RS06515 PF02463 RecF/RecN/SMC N terminal domain V429_RS06515 PF06470 SMC proteins Flexible Hinge Domain V429_RS06520 PF04354 ZipA, C-terminal FtsZ-binding domain V429_RS06525 PF12826 Helix-hairpin-helix motif V429_RS06525 PF01653 NAD-dependent DNA ligase adenylation domain V429_RS06525 PF00533 BRCA1 C Terminus (BRCT) domain V429_RS06525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain V429_RS06525 PF03120 NAD-dependent DNA ligase OB-fold domain V429_RS06535 PF13597 Anaerobic ribonucleoside-triphosphate reductase V429_RS06535 PF03477 ATP cone domain V429_RS06570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS06570 PF00529 HlyD membrane-fusion protein of T1SS V429_RS06575 PF01047 MarR family V429_RS06580 PF03390 2-hydroxycarboxylate transporter family V429_RS06585 PF00390 Malic enzyme, N-terminal domain V429_RS06585 PF03949 Malic enzyme, NAD binding domain V429_RS06590 PF17203 Single cache domain 3 V429_RS06590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain V429_RS06590 PF00989 PAS fold V429_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS06595 PF00072 Response regulator receiver domain V429_RS06595 PF12431 Transcriptional regulator V429_RS06600 PF00892 EamA-like transporter family V429_RS06610 PF00171 Aldehyde dehydrogenase family V429_RS06615 PF02954 Bacterial regulatory protein, Fis family V429_RS06615 PF01590 GAF domain V429_RS06615 PF00158 Sigma-54 interaction domain V429_RS06620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V429_RS06620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V429_RS06620 PF02770 Acyl-CoA dehydrogenase, middle domain V429_RS06625 PF02515 CoA-transferase family III V429_RS06630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS06635 PF00486 Transcriptional regulatory protein, C terminal V429_RS06635 PF00072 Response regulator receiver domain V429_RS06640 PF11808 Phosphate regulon sensor protein PhoR V429_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS06640 PF00512 His Kinase A (phospho-acceptor) domain V429_RS06640 PF00989 PAS fold V429_RS06645 PF12849 PBP superfamily domain V429_RS06650 PF01435 Peptidase family M48 V429_RS06660 PF00480 ROK family V429_RS06665 PF03932 CutC family V429_RS06670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS06670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V429_RS06675 PF00005 ABC transporter V429_RS06695 PF00293 NUDIX domain V429_RS06705 PF08534 Redoxin V429_RS06710 PF01699 Sodium/calcium exchanger protein V429_RS06715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V429_RS06715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain V429_RS06720 PF01235 Sodium:alanine symporter family V429_RS06730 PF00860 Permease family V429_RS06735 PF00072 Response regulator receiver domain V429_RS06735 PF00990 Diguanylate cyclase, GGDEF domain V429_RS06740 PF10692 Protein of unknown function (DUF2498) V429_RS06745 PF01554 MatE V429_RS06750 PF12833 Helix-turn-helix domain V429_RS06755 PF00390 Malic enzyme, N-terminal domain V429_RS06755 PF03949 Malic enzyme, NAD binding domain V429_RS06760 PF01389 OmpA-like transmembrane domain V429_RS06760 PF00691 OmpA family V429_RS06765 PF01389 OmpA-like transmembrane domain V429_RS06765 PF00691 OmpA family V429_RS06770 PF00691 OmpA family V429_RS06770 PF01389 OmpA-like transmembrane domain V429_RS06785 PF00209 Sodium:neurotransmitter symporter family V429_RS06790 PF01734 Patatin-like phospholipase V429_RS06795 PF00990 Diguanylate cyclase, GGDEF domain V429_RS06800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS06800 PF00529 HlyD membrane-fusion protein of T1SS V429_RS06805 PF00873 AcrB/AcrD/AcrF family V429_RS06815 PF04055 Radical SAM superfamily V429_RS06815 PF11842 Domain of unknown function (DUF3362) V429_RS06815 PF08497 Radical SAM N-terminal V429_RS06835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V429_RS06845 PF02075 Crossover junction endodeoxyribonuclease RuvC V429_RS06850 PF00230 Major intrinsic protein V429_RS06855 PF10145 Phage-related minor tail protein V429_RS06855 PF01464 Transglycosylase SLT domain V429_RS06855 PF01551 Peptidase family M23 V429_RS06860 PF00128 Alpha amylase, catalytic domain V429_RS06865 PF01551 Peptidase family M23 V429_RS06880 PF13396 Phospholipase_D-nuclease N-terminal V429_RS06880 PF13091 PLD-like domain V429_RS06890 PF00551 Formyl transferase V429_RS06890 PF01842 ACT domain V429_RS06895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V429_RS06905 PF00085 Thioredoxin V429_RS06910 PF01648 4'-phosphopantetheinyl transferase superfamily V429_RS06915 PF00877 NlpC/P60 family V429_RS06920 PF05971 RNA methyltransferase V429_RS06925 PF01575 MaoC like domain V429_RS06935 PF03734 L,D-transpeptidase catalytic domain V429_RS06935 PF01476 LysM domain V429_RS06935 PF17969 L,D-transpeptidase C-terminal domain V429_RS06945 PF00271 Helicase conserved C-terminal domain V429_RS06945 PF00176 SNF2 family N-terminal domain V429_RS07005 PF04002 RadC-like JAB domain V429_RS07075 PF05930 Prophage CP4-57 regulatory protein (AlpA) V429_RS07085 PF00589 Phage integrase family V429_RS07085 PF13356 Arm DNA-binding domain V429_RS07090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS07095 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS07100 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS07100 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS07105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS07105 PF00005 ABC transporter V429_RS07110 PF00465 Iron-containing alcohol dehydrogenase V429_RS07115 PF05025 RbsD / FucU transport protein family V429_RS07125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain V429_RS07125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V429_RS07130 PF07882 L-fucose isomerase, second N-terminal domain V429_RS07130 PF07881 L-fucose isomerase, first N-terminal domain V429_RS07130 PF02952 L-fucose isomerase, C-terminal domain V429_RS07135 PF07690 Major Facilitator Superfamily V429_RS07140 PF00455 DeoR C terminal sensor domain V429_RS07140 PF08220 DeoR-like helix-turn-helix domain V429_RS07145 PF00141 Peroxidase V429_RS07150 PF00701 Dihydrodipicolinate synthetase family V429_RS07155 PF01380 SIS domain V429_RS07155 PF01418 Helix-turn-helix domain, rpiR family V429_RS07160 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase V429_RS07165 PF00480 ROK family V429_RS07170 PF00474 Sodium:solute symporter family V429_RS07175 PF04074 YhcH/YjgK/YiaL V429_RS07205 PF00893 Small Multidrug Resistance protein V429_RS07210 PF00893 Small Multidrug Resistance protein V429_RS07220 PF06130 Phosphate propanoyltransferase V429_RS07225 PF00936 BMC domain V429_RS07230 PF04055 Radical SAM superfamily V429_RS07230 PF13187 4Fe-4S dicluster domain V429_RS07235 PF01228 Glycine radical V429_RS07235 PF02901 Pyruvate formate lyase-like V429_RS07240 PF00171 Aldehyde dehydrogenase family V429_RS07240 PF00465 Iron-containing alcohol dehydrogenase V429_RS07250 PF00465 Iron-containing alcohol dehydrogenase V429_RS07250 PF00171 Aldehyde dehydrogenase family V429_RS07255 PF00936 BMC domain V429_RS07260 PF00936 BMC domain V429_RS07265 PF00936 BMC domain V429_RS07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS07285 PF03466 LysR substrate binding domain V429_RS07290 PF02634 FdhD/NarQ family V429_RS07295 PF00384 Molybdopterin oxidoreductase V429_RS07310 PF00440 Bacterial regulatory proteins, tetR family V429_RS07315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V429_RS07315 PF02770 Acyl-CoA dehydrogenase, middle domain V429_RS07315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V429_RS07315 PF09317 Domain of unknown function (DUF1974) V429_RS07320 PF00873 AcrB/AcrD/AcrF family V429_RS07330 PF00224 Pyruvate kinase, barrel domain V429_RS07330 PF02887 Pyruvate kinase, alpha/beta domain V429_RS07335 PF01380 SIS domain V429_RS07335 PF01418 Helix-turn-helix domain, rpiR family V429_RS07340 PF02685 Glucokinase V429_RS07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS07350 PF00486 Transcriptional regulatory protein, C terminal V429_RS07350 PF00072 Response regulator receiver domain V429_RS07355 PF03412 Peptidase C39 family V429_RS07355 PF00664 ABC transporter transmembrane region V429_RS07355 PF00005 ABC transporter V429_RS07365 PF00664 ABC transporter transmembrane region V429_RS07365 PF00005 ABC transporter V429_RS07365 PF03412 Peptidase C39 family V429_RS07380 PF11647 Membrane Localization Domain V429_RS07380 PF16671 Actin cross-linking domain V429_RS07380 PF11713 Peptidase C80 family V429_RS07380 PF07634 RtxA repeat V429_RS07380 PF12146 Serine aminopeptidase, S33 V429_RS07390 PF18693 TRAM domain V429_RS07390 PF00919 Uncharacterized protein family UPF0004 V429_RS07390 PF04055 Radical SAM superfamily V429_RS07395 PF00072 Response regulator receiver domain V429_RS07405 PF02049 Flagellar hook-basal body complex protein FliE V429_RS07410 PF08345 Flagellar M-ring protein C-terminal V429_RS07410 PF01514 Secretory protein of YscJ/FliF family V429_RS07415 PF14842 FliG N-terminal domain V429_RS07415 PF01706 FliG C-terminal domain V429_RS07415 PF14841 FliG middle domain V429_RS07425 PF18269 T3SS EscN ATPase C-terminal domain V429_RS07425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V429_RS07445 PF02154 Flagellar motor switch protein FliM V429_RS07445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V429_RS07450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V429_RS07455 PF04347 Flagellar biosynthesis protein, FliO V429_RS07460 PF00813 FliP family V429_RS07465 PF01313 Bacterial export proteins, family 3 V429_RS07470 PF01311 Bacterial export proteins, family 1 V429_RS07475 PF01312 FlhB HrpN YscU SpaS Family V429_RS07480 PF00771 FHIPEP family V429_RS07485 PF00448 SRP54-type protein, GTPase domain V429_RS07490 PF10609 NUBPL iron-transfer P-loop NTPase V429_RS07495 PF04545 Sigma-70, region 4 V429_RS07495 PF04542 Sigma-70 region 2 V429_RS07495 PF04539 Sigma-70 region 3 V429_RS07500 PF00072 Response regulator receiver domain V429_RS07505 PF04344 Chemotaxis phosphatase, CheZ V429_RS07510 PF00072 Response regulator receiver domain V429_RS07510 PF02895 Signal transducing histidine kinase, homodimeric domain V429_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS07510 PF01627 Hpt domain V429_RS07510 PF01584 CheW-like domain V429_RS07515 PF01339 CheB methylesterase V429_RS07515 PF00072 Response regulator receiver domain V429_RS07520 PF01618 MotA/TolQ/ExbB proton channel family V429_RS07525 PF00691 OmpA family V429_RS07525 PF13677 Membrane MotB of proton-channel complex MotA/MotB V429_RS07530 PF13614 AAA domain V429_RS07540 PF01584 CheW-like domain V429_RS07550 PF00005 ABC transporter V429_RS07555 PF03379 CcmB protein V429_RS07560 PF01578 Cytochrome C assembly protein V429_RS07565 PF04995 Heme exporter protein D (CcmD) V429_RS07570 PF03100 CcmE V429_RS07575 PF01578 Cytochrome C assembly protein V429_RS07575 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal V429_RS07580 PF08534 Redoxin V429_RS07585 PF03918 Cytochrome C biogenesis protein V429_RS07590 PF03918 Cytochrome C biogenesis protein V429_RS07595 PF04333 MlaA lipoprotein V429_RS07600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V429_RS07600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V429_RS07605 PF00462 Glutaredoxin V429_RS07610 PF01189 16S rRNA methyltransferase RsmB/F V429_RS07610 PF01029 NusB family V429_RS07625 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region V429_RS07625 PF01243 Pyridoxamine 5'-phosphate oxidase V429_RS07630 PF02798 Glutathione S-transferase, N-terminal domain V429_RS07640 PF13508 Acetyltransferase (GNAT) domain V429_RS07650 PF08007 Cupin superfamily protein V429_RS07655 PF00206 Lyase V429_RS07655 PF08328 Adenylosuccinate lyase C-terminal V429_RS07660 PF04356 Protein of unknown function (DUF489) V429_RS07670 PF00293 NUDIX domain V429_RS07675 PF00849 RNA pseudouridylate synthase V429_RS07685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V429_RS07690 PF07690 Major Facilitator Superfamily V429_RS07695 PF02378 Phosphotransferase system, EIIC V429_RS07695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V429_RS07695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS07715 PF00583 Acetyltransferase (GNAT) family V429_RS07730 PF00356 Bacterial regulatory proteins, lacI family V429_RS07730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS07735 PF02378 Phosphotransferase system, EIIC V429_RS07735 PF00367 phosphotransferase system, EIIB V429_RS07740 PF00155 Aminotransferase class I and II V429_RS07760 PF01238 Phosphomannose isomerase type I V429_RS07765 PF12833 Helix-turn-helix domain V429_RS07770 PF00180 Isocitrate/isopropylmalate dehydrogenase V429_RS07775 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS07780 PF02447 GntP family permease V429_RS07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS07785 PF03466 LysR substrate binding domain V429_RS07815 PF01420 Type I restriction modification DNA specificity domain V429_RS07820 PF02384 N-6 DNA Methylase V429_RS07820 PF12161 HsdM N-terminal domain V429_RS07825 PF08463 EcoEI R protein C-terminal V429_RS07825 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) V429_RS07825 PF00271 Helicase conserved C-terminal domain V429_RS07825 PF04851 Type III restriction enzyme, res subunit V429_RS07890 PF08765 Mor transcription activator family V429_RS07930 PF08461 Ribonuclease R winged-helix domain V429_RS07935 PF11985 Protein of unknown function (DUF3486) V429_RS07940 PF03237 Terminase-like family V429_RS07945 PF06074 Protein of unknown function (DUF935) V429_RS07965 PF10123 Mu-like prophage I protein V429_RS07970 PF10124 Mu-like prophage major head subunit gpT V429_RS08045 PF00271 Helicase conserved C-terminal domain V429_RS08045 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) V429_RS08045 PF08463 EcoEI R protein C-terminal V429_RS08045 PF04851 Type III restriction enzyme, res subunit V429_RS08050 PF01668 SmpB protein V429_RS08055 PF03364 Polyketide cyclase / dehydrase and lipid transport V429_RS08060 PF03658 RnfH family Ubiquitin V429_RS08065 PF13460 NAD(P)H-binding V429_RS08070 PF04355 SmpA / OmlA family V429_RS08100 PF00263 Bacterial type II and III secretion system protein V429_RS08100 PF04972 BON domain V429_RS08100 PF13629 Pilus formation protein N terminal region V429_RS08115 PF00437 Type II/IV secretion system protein V429_RS08150 PF00465 Iron-containing alcohol dehydrogenase V429_RS08155 PF01048 Phosphorylase superfamily V429_RS08160 PF00849 RNA pseudouridylate synthase V429_RS08165 PF01156 Inosine-uridine preferring nucleoside hydrolase V429_RS08180 PF07509 Protein of unknown function (DUF1523) V429_RS08185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS08185 PF00672 HAMP domain V429_RS08190 PF01810 LysE type translocator V429_RS08200 PF02080 TrkA-C domain V429_RS08200 PF03471 Transporter associated domain V429_RS08200 PF00999 Sodium/hydrogen exchanger family V429_RS08210 PF00999 Sodium/hydrogen exchanger family V429_RS08210 PF03471 Transporter associated domain V429_RS08210 PF02080 TrkA-C domain V429_RS08215 PF02557 D-alanyl-D-alanine carboxypeptidase V429_RS08220 PF07687 Peptidase dimerisation domain V429_RS08220 PF01546 Peptidase family M20/M25/M40 V429_RS08225 PF03960 ArsC family V429_RS08230 PF03466 LysR substrate binding domain V429_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS08240 PF03606 C4-dicarboxylate anaerobic carrier V429_RS08245 PF01546 Peptidase family M20/M25/M40 V429_RS08245 PF07687 Peptidase dimerisation domain V429_RS08255 PF03605 Anaerobic c4-dicarboxylate membrane transporter V429_RS08260 PF00152 tRNA synthetases class II (D, K and N) V429_RS08260 PF01336 OB-fold nucleic acid binding domain V429_RS08275 PF00202 Aminotransferase class-III V429_RS08280 PF06968 Biotin and Thiamin Synthesis associated domain V429_RS08280 PF04055 Radical SAM superfamily V429_RS08285 PF00155 Aminotransferase class I and II V429_RS08290 PF12697 Alpha/beta hydrolase family V429_RS08290 PF08241 Methyltransferase domain V429_RS08300 PF01435 Peptidase family M48 V429_RS08305 PF13426 PAS domain V429_RS08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS08305 PF08447 PAS fold V429_RS08310 PF03473 MOSC domain V429_RS08310 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS08310 PF03476 MOSC N-terminal beta barrel domain V429_RS08310 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS08310 PF03476 MOSC N-terminal beta barrel domain V429_RS08310 PF03473 MOSC domain V429_RS08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS08315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V429_RS08315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V429_RS08320 PF10371 Domain of unknown function V429_RS08320 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II V429_RS08320 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase V429_RS08320 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg V429_RS08320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS08325 PF01804 Penicillin amidase V429_RS08345 PF01554 MatE V429_RS08365 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS08375 PF00465 Iron-containing alcohol dehydrogenase V429_RS08385 PF00440 Bacterial regulatory proteins, tetR family V429_RS08385 PF08359 YsiA-like protein, C-terminal region V429_RS08390 PF00171 Aldehyde dehydrogenase family V429_RS08400 PF00877 NlpC/P60 family V429_RS08405 PF07968 Leukocidin/Hemolysin toxin family V429_RS08405 PF12563 Hemolytic toxin N terminal V429_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS08410 PF03466 LysR substrate binding domain V429_RS08415 PF00578 AhpC/TSA family V429_RS08415 PF10417 C-terminal domain of 1-Cys peroxiredoxin V429_RS08435 PF08003 Protein of unknown function (DUF1698) V429_RS08440 PF13649 Methyltransferase domain V429_RS08445 PF01904 Protein of unknown function DUF72 V429_RS08450 PF02938 GAD domain V429_RS08450 PF00152 tRNA synthetases class II (D, K and N) V429_RS08450 PF01336 OB-fold nucleic acid binding domain V429_RS08455 PF01709 Transcriptional regulator V429_RS08460 PF08019 Phosphoethanolamine transferase EptA/EptB V429_RS08460 PF00884 Sulfatase V429_RS08465 PF00480 ROK family V429_RS08465 PF01047 MarR family V429_RS08470 PF01979 Amidohydrolase family V429_RS08475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase V429_RS08480 PF02378 Phosphotransferase system, EIIC V429_RS08480 PF00367 phosphotransferase system, EIIB V429_RS08480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V429_RS08485 PF02838 Glycosyl hydrolase family 20, domain 2 V429_RS08485 PF00728 Glycosyl hydrolase family 20, catalytic domain V429_RS08485 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain V429_RS08485 PF03173 Putative carbohydrate binding domain V429_RS08490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain V429_RS08490 PF00749 tRNA synthetases class I (E and Q), catalytic domain V429_RS08495 PF01475 Ferric uptake regulator family V429_RS08505 PF00258 Flavodoxin V429_RS08510 PF01402 Ribbon-helix-helix protein, copG family V429_RS08520 PF12697 Alpha/beta hydrolase family V429_RS08525 PF03925 SeqA protein C-terminal domain V429_RS08525 PF17206 SeqA protein N-terminal domain V429_RS08530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V429_RS08530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V429_RS08530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V429_RS08530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V429_RS08540 PF01047 MarR family V429_RS08545 PF13406 Transglycosylase SLT domain V429_RS08550 PF01066 CDP-alcohol phosphatidyltransferase V429_RS08555 PF00005 ABC transporter V429_RS08565 PF13416 Bacterial extracellular solute-binding protein V429_RS08570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V429_RS08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS08570 PF00403 Heavy-metal-associated domain V429_RS08575 PF02627 Carboxymuconolactone decarboxylase family V429_RS08585 PF01625 Peptide methionine sulfoxide reductase V429_RS08600 PF01103 Surface antigen V429_RS08600 PF07244 Surface antigen variable number repeat V429_RS08600 PF17243 POTRA domain TamA domain 1 V429_RS08605 PF04357 TamB, inner membrane protein subunit of TAM complex V429_RS08625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V429_RS08630 PF03707 Bacterial signalling protein N terminal repeat V429_RS08630 PF00990 Diguanylate cyclase, GGDEF domain V429_RS08630 PF00563 EAL domain V429_RS08635 PF01464 Transglycosylase SLT domain V429_RS08635 PF14718 Soluble lytic murein transglycosylase L domain V429_RS08640 PF00356 Bacterial regulatory proteins, lacI family V429_RS08650 PF03061 Thioesterase superfamily V429_RS08660 PF03372 Endonuclease/Exonuclease/phosphatase family V429_RS08665 PF01464 Transglycosylase SLT domain V429_RS08665 PF01476 LysM domain V429_RS08670 PF16123 Hydroxyacylglutathione hydrolase C-terminus V429_RS08670 PF00753 Metallo-beta-lactamase superfamily V429_RS08675 PF08241 Methyltransferase domain V429_RS08680 PF00075 RNase H V429_RS08685 PF00929 Exonuclease V429_RS08695 PF11849 Domain of unknown function (DUF3369) V429_RS08700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V429_RS08700 PF02770 Acyl-CoA dehydrogenase, middle domain V429_RS08700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V429_RS08700 PF09317 Domain of unknown function (DUF1974) V429_RS08705 PF13580 SIS domain V429_RS08710 PF13230 Glutamine amidotransferases class-II V429_RS08720 PF01933 Uncharacterised protein family UPF0052 V429_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS08730 PF00672 HAMP domain V429_RS08730 PF17149 Periplasmic sensor domain found in signal transduction proteins V429_RS08730 PF01627 Hpt domain V429_RS08730 PF00072 Response regulator receiver domain V429_RS08730 PF00512 His Kinase A (phospho-acceptor) domain V429_RS08740 PF00072 Response regulator receiver domain V429_RS08740 PF00196 Bacterial regulatory proteins, luxR family V429_RS08745 PF00672 HAMP domain V429_RS08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS08745 PF07730 Histidine kinase V429_RS08745 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term V429_RS08750 PF06463 Molybdenum Cofactor Synthesis C V429_RS08750 PF04055 Radical SAM superfamily V429_RS08755 PF00037 4Fe-4S binding domain V429_RS08755 PF13187 4Fe-4S dicluster domain V429_RS08755 PF12800 4Fe-4S binding domain V429_RS08765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS08765 PF00384 Molybdopterin oxidoreductase V429_RS08765 PF01568 Molydopterin dinucleotide binding domain V429_RS08765 PF10518 TAT (twin-arginine translocation) pathway signal sequence V429_RS08770 PF12800 4Fe-4S binding domain V429_RS08770 PF12838 4Fe-4S dicluster domain V429_RS08775 PF12801 4Fe-4S binding domain V429_RS08775 PF13237 4Fe-4S dicluster domain V429_RS08780 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) V429_RS08785 PF03264 NapC/NirT cytochrome c family, N-terminal region V429_RS08790 PF00994 Probable molybdopterin binding domain V429_RS08795 PF01967 MoaC family V429_RS08800 PF02597 ThiS family V429_RS08805 PF02391 MoaE protein V429_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS08820 PF03459 TOBE domain V429_RS08820 PF00005 ABC transporter V429_RS08825 PF00561 alpha/beta hydrolase fold V429_RS08830 PF00899 ThiF family V429_RS08835 PF03453 MoeA N-terminal region (domain I and II) V429_RS08835 PF03454 MoeA C-terminal region (domain IV) V429_RS08835 PF00994 Probable molybdopterin binding domain V429_RS08840 PF01227 GTP cyclohydrolase I V429_RS08845 PF00672 HAMP domain V429_RS08845 PF17200 Single Cache domain 2 V429_RS08845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS08850 PF01268 Formate--tetrahydrofolate ligase V429_RS08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS08860 PF03466 LysR substrate binding domain V429_RS08865 PF04264 YceI-like domain V429_RS08890 PF07687 Peptidase dimerisation domain V429_RS08890 PF01546 Peptidase family M20/M25/M40 V429_RS08895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V429_RS08895 PF17810 Arginine decarboxylase helical bundle domain V429_RS08895 PF17944 Arginine decarboxylase C-terminal helical extension V429_RS08910 PF00672 HAMP domain V429_RS08910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS08920 PF01042 Endoribonuclease L-PSP V429_RS08925 PF03313 Serine dehydratase alpha chain V429_RS08930 PF13309 HTH domain V429_RS08930 PF08348 YheO-like PAS domain V429_RS08935 PF00300 Histidine phosphatase superfamily (branch 1) V429_RS08940 PF04851 Type III restriction enzyme, res subunit V429_RS08940 PF00271 Helicase conserved C-terminal domain V429_RS08960 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain V429_RS08960 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase V429_RS08965 PF00849 RNA pseudouridylate synthase V429_RS08965 PF01479 S4 domain V429_RS08970 PF07690 Major Facilitator Superfamily V429_RS08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS08980 PF03466 LysR substrate binding domain V429_RS08985 PF07690 Major Facilitator Superfamily V429_RS09005 PF04391 Protein of unknown function (DUF533) V429_RS09015 PF00155 Aminotransferase class I and II V429_RS09015 PF00392 Bacterial regulatory proteins, gntR family V429_RS09020 PF01654 Cytochrome bd terminal oxidase subunit I V429_RS09025 PF02322 Cytochrome bd terminal oxidase subunit II V429_RS09035 PF07690 Major Facilitator Superfamily V429_RS09040 PF00248 Aldo/keto reductase family V429_RS09060 PF03466 LysR substrate binding domain V429_RS09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS09065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V429_RS09065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain V429_RS09070 PF00230 Major intrinsic protein V429_RS09075 PF07690 Major Facilitator Superfamily V429_RS09080 PF08220 DeoR-like helix-turn-helix domain V429_RS09080 PF00455 DeoR C terminal sensor domain V429_RS09085 PF01266 FAD dependent oxidoreductase V429_RS09085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase V429_RS09090 PF03009 Glycerophosphoryl diester phosphodiesterase family V429_RS09095 PF00793 DAHP synthetase I family V429_RS09100 PF01817 Chorismate mutase type II V429_RS09100 PF02153 Prephenate dehydrogenase V429_RS09105 PF03466 LysR substrate binding domain V429_RS09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS09110 PF04219 Protein of unknown function, DUF V429_RS09115 PF03974 Ecotin V429_RS09135 PF00326 Prolyl oligopeptidase family V429_RS09135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V429_RS09140 PF07715 TonB-dependent Receptor Plug Domain V429_RS09140 PF00593 TonB dependent receptor V429_RS09145 PF11893 Domain of unknown function (DUF3413) V429_RS09145 PF00884 Sulfatase V429_RS09150 PF07208 Protein of unknown function (DUF1414) V429_RS09155 PF04245 37-kD nucleoid-associated bacterial protein V429_RS09160 PF01547 Bacterial extracellular solute-binding protein V429_RS09165 PF14785 Maltose transport system permease protein MalF P2 domain V429_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS09170 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS09175 PF08402 TOBE domain V429_RS09175 PF00005 ABC transporter V429_RS09180 PF03976 Polyphosphate kinase 2 (PPK2) V429_RS09185 PF00561 alpha/beta hydrolase fold V429_RS09195 PF01594 AI-2E family transporter V429_RS09200 PF01206 Sulfurtransferase TusA V429_RS09205 PF01435 Peptidase family M48 V429_RS09205 PF13181 Tetratricopeptide repeat V429_RS09210 PF00578 AhpC/TSA family V429_RS09215 PF03960 ArsC family V429_RS09230 PF04336 Acyl carrier protein phosphodiesterase V429_RS09235 PF01979 Amidohydrolase family V429_RS09240 PF03956 Lysine exporter LysO V429_RS09245 PF00005 ABC transporter V429_RS09250 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS09270 PF04055 Radical SAM superfamily V429_RS09275 PF00563 EAL domain V429_RS09275 PF00990 Diguanylate cyclase, GGDEF domain V429_RS09275 PF03707 Bacterial signalling protein N terminal repeat V429_RS09280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V429_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS09295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS09295 PF00529 HlyD membrane-fusion protein of T1SS V429_RS09300 PF02321 Outer membrane efflux protein V429_RS09305 PF01594 AI-2E family transporter V429_RS09310 PF01546 Peptidase family M20/M25/M40 V429_RS09310 PF07687 Peptidase dimerisation domain V429_RS09315 PF17962 Bacterial macroglobulin domain 6 V429_RS09315 PF00207 Alpha-2-macroglobulin family V429_RS09315 PF07703 Alpha-2-macroglobulin bait region domain V429_RS09315 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain V429_RS09315 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain V429_RS09315 PF11974 Bacterial alpha-2-macroglobulin MG3 domain V429_RS09315 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain V429_RS09315 PF07678 A-macroglobulin TED domain V429_RS09315 PF01835 MG2 domain V429_RS09320 PF00912 Transglycosylase V429_RS09320 PF00905 Penicillin binding protein transpeptidase domain V429_RS09320 PF06832 Penicillin-Binding Protein C-terminus Family V429_RS09330 PF02568 Thiamine biosynthesis protein (ThiI) V429_RS09330 PF02926 THUMP domain V429_RS09340 PF03458 UPF0126 domain V429_RS09345 PF07196 Flagellin hook IN motif V429_RS09345 PF00669 Bacterial flagellin N-terminal helical region V429_RS09345 PF00700 Bacterial flagellin C-terminal helical region V429_RS09350 PF07196 Flagellin hook IN motif V429_RS09350 PF00669 Bacterial flagellin N-terminal helical region V429_RS09350 PF00700 Bacterial flagellin C-terminal helical region V429_RS09355 PF00665 Integrase core domain V429_RS09360 PF01527 Transposase V429_RS09365 PF00700 Bacterial flagellin C-terminal helical region V429_RS09365 PF00669 Bacterial flagellin N-terminal helical region V429_RS09365 PF07196 Flagellin hook IN motif V429_RS09375 PF07196 Flagellin hook IN motif V429_RS09375 PF07195 Flagellar hook-associated protein 2 C-terminus V429_RS09375 PF02465 Flagellar hook-associated protein 2 N-terminus V429_RS09380 PF02561 Flagellar protein FliS V429_RS09400 PF08666 SAF domain V429_RS09400 PF03102 NeuB family V429_RS09410 PF00202 Aminotransferase class-III V429_RS09425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V429_RS09430 PF02719 Polysaccharide biosynthesis protein V429_RS09435 PF01497 Periplasmic binding protein V429_RS09445 PF01048 Phosphorylase superfamily V429_RS09455 PF02535 ZIP Zinc transporter V429_RS09460 PF00672 HAMP domain V429_RS09460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS09465 PF00459 Inositol monophosphatase family V429_RS09475 PF00043 Glutathione S-transferase, C-terminal domain V429_RS09475 PF02798 Glutathione S-transferase, N-terminal domain V429_RS09480 PF07690 Major Facilitator Superfamily V429_RS09485 PF05164 Cell division protein ZapA V429_RS09490 PF03695 Uncharacterised protein family (UPF0149) V429_RS09495 PF01494 FAD binding domain V429_RS09500 PF01494 FAD binding domain V429_RS09505 PF08669 Glycine cleavage T-protein C-terminal barrel domain V429_RS09505 PF01571 Aminomethyltransferase folate-binding domain V429_RS09510 PF01597 Glycine cleavage H-protein V429_RS09515 PF02347 Glycine cleavage system P-protein V429_RS09520 PF01022 Bacterial regulatory protein, arsR family V429_RS09525 PF01758 Sodium Bile acid symporter family V429_RS09530 PF03960 ArsC family V429_RS09535 PF08241 Methyltransferase domain V429_RS09545 PF07690 Major Facilitator Superfamily V429_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS09550 PF13192 Thioredoxin domain V429_RS09555 PF00578 AhpC/TSA family V429_RS09555 PF10417 C-terminal domain of 1-Cys peroxiredoxin V429_RS09560 PF00571 CBS domain V429_RS09565 PF02547 Queuosine biosynthesis protein V429_RS09570 PF01702 Queuine tRNA-ribosyltransferase V429_RS09575 PF02699 Preprotein translocase subunit V429_RS09580 PF02355 Protein export membrane protein V429_RS09580 PF13721 SecD export protein N-terminal TM region V429_RS09580 PF07549 SecD/SecF GG Motif V429_RS09585 PF02355 Protein export membrane protein V429_RS09585 PF07549 SecD/SecF GG Motif V429_RS09595 PF13181 Tetratricopeptide repeat V429_RS09595 PF07719 Tetratricopeptide repeat V429_RS09600 PF01136 Peptidase family U32 V429_RS09605 PF01136 Peptidase family U32 V429_RS09610 PF02036 SCP-2 sterol transfer family V429_RS09620 PF00588 SpoU rRNA Methylase family V429_RS09625 PF02082 Transcriptional regulator V429_RS09630 PF00266 Aminotransferase class-V V429_RS09635 PF01592 NifU-like N terminal domain V429_RS09640 PF01521 Iron-sulphur cluster biosynthesis V429_RS09645 PF07743 HSCB C-terminal oligomerisation domain V429_RS09650 PF00012 Hsp70 protein V429_RS09655 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS09660 PF12404 Peptidase V429_RS09660 PF00883 Cytosol aminopeptidase family, catalytic domain V429_RS09665 PF00883 Cytosol aminopeptidase family, catalytic domain V429_RS09665 PF12404 Peptidase V429_RS09670 PF00334 Nucleoside diphosphate kinase V429_RS09675 PF04055 Radical SAM superfamily V429_RS09685 PF13464 Domain of unknown function (DUF4115) V429_RS09690 PF04551 GcpE protein V429_RS09695 PF13393 Histidyl-tRNA synthetase V429_RS09695 PF03129 Anticodon binding domain V429_RS09700 PF09976 Tetratricopeptide repeat-like domain V429_RS09705 PF13360 PQQ-like domain V429_RS09710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal V429_RS09710 PF01926 50S ribosome-binding GTPase V429_RS09715 PF07191 zinc-ribbons V429_RS09720 PF01464 Transglycosylase SLT domain V429_RS09720 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS09725 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain V429_RS09725 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal V429_RS09725 PF02769 AIR synthase related protein, C-terminal domain V429_RS09735 PF00361 Proton-conducting membrane transporter V429_RS09740 PF00361 Proton-conducting membrane transporter V429_RS09745 PF00361 Proton-conducting membrane transporter V429_RS09745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus V429_RS09750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L V429_RS09755 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 V429_RS09760 PF12838 4Fe-4S dicluster domain V429_RS09765 PF00146 NADH dehydrogenase V429_RS09770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS09770 PF00384 Molybdopterin oxidoreductase V429_RS09770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V429_RS09775 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V429_RS09775 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit V429_RS09785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit V429_RS09785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit V429_RS09790 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V429_RS09795 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 V429_RS09800 PF13677 Membrane MotB of proton-channel complex MotA/MotB V429_RS09800 PF00691 OmpA family V429_RS09805 PF01618 MotA/TolQ/ExbB proton channel family V429_RS09820 PF04536 TPM domain V429_RS09830 PF03411 Penicillin-insensitive murein endopeptidase V429_RS09840 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) V429_RS09845 PF00248 Aldo/keto reductase family V429_RS09860 PF01212 Beta-eliminating lyase V429_RS09870 PF00072 Response regulator receiver domain V429_RS09875 PF03466 LysR substrate binding domain V429_RS09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS09885 PF00563 EAL domain V429_RS09885 PF00990 Diguanylate cyclase, GGDEF domain V429_RS09885 PF03707 Bacterial signalling protein N terminal repeat V429_RS09885 PF13188 PAS domain V429_RS09890 PF00881 Nitroreductase family V429_RS09905 PF07690 Major Facilitator Superfamily V429_RS09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS09910 PF03466 LysR substrate binding domain V429_RS09915 PF03466 LysR substrate binding domain V429_RS09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS09920 PF00925 GTP cyclohydrolase II V429_RS09925 PF02224 Cytidylate kinase V429_RS09930 PF00575 S1 RNA binding domain V429_RS09935 PF00216 Bacterial DNA-binding protein V429_RS09945 PF18073 Rubredoxin metal binding domain V429_RS09950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family V429_RS09965 PF06508 Queuosine biosynthesis protein QueC V429_RS09970 PF04055 Radical SAM superfamily V429_RS09975 PF12843 Putative quorum-sensing-regulated virulence factor V429_RS09980 PF01923 Cobalamin adenosyltransferase V429_RS09985 PF00816 H-NS histone family V429_RS09990 PF03553 Na+/H+ antiporter family V429_RS09995 PF00265 Thymidine kinase V429_RS10005 PF10722 Putative bacterial sensory transduction regulator V429_RS10020 PF04717 Type VI secretion system, phage-baseplate injector V429_RS10050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain V429_RS10050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain V429_RS10055 PF00313 'Cold-shock' DNA-binding domain V429_RS10060 PF02617 ATP-dependent Clp protease adaptor protein ClpS V429_RS10065 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS10065 PF07724 AAA domain (Cdc48 subfamily) V429_RS10065 PF17871 AAA lid domain V429_RS10065 PF10431 C-terminal, D2-small domain, of ClpB protein V429_RS10065 PF02861 Clp amino terminal domain, pathogenicity island component V429_RS10070 PF01176 Translation initiation factor 1A / IF-1 V429_RS10075 PF04376 Arginine-tRNA-protein transferase, N terminus V429_RS10075 PF04377 Arginine-tRNA-protein transferase, C terminus V429_RS10080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase V429_RS10085 PF05433 Glycine zipper 2TM domain V429_RS10090 PF00990 Diguanylate cyclase, GGDEF domain V429_RS10090 PF17158 Membrane-associated sensor, integral membrane domain V429_RS10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS10100 PF01037 Lrp/AsnC ligand binding domain V429_RS10105 PF09397 Ftsk gamma domain V429_RS10105 PF17854 FtsK alpha domain V429_RS10105 PF13491 4TM region of DNA translocase FtsK/SpoIIIE V429_RS10105 PF01580 FtsK/SpoIIIE family V429_RS10110 PF03548 Outer membrane lipoprotein carrier protein LolA V429_RS10115 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS10115 PF12002 MgsA AAA+ ATPase C terminal V429_RS10115 PF16193 AAA C-terminal domain V429_RS10125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V429_RS10125 PF02403 Seryl-tRNA synthetase N-terminal domain V429_RS10130 PF02674 Colicin V production protein V429_RS10135 PF00156 Phosphoribosyl transferase domain V429_RS10140 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) V429_RS10145 PF00005 ABC transporter V429_RS10150 PF00005 ABC transporter V429_RS10150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS10155 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS10155 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS10160 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS10165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS10170 PF02954 Bacterial regulatory protein, Fis family V429_RS10170 PF00158 Sigma-54 interaction domain V429_RS10175 PF04012 PspA/IM30 family V429_RS10180 PF06667 Phage shock protein B V429_RS10190 PF04317 YcjX-like family, DUF463 V429_RS10195 PF05128 Domain of unknown function (DUF697) V429_RS10200 PF00351 Biopterin-dependent aromatic amino acid hydroxylase V429_RS10205 PF01329 Pterin 4 alpha carbinolamine dehydratase V429_RS10210 PF01329 Pterin 4 alpha carbinolamine dehydratase V429_RS10215 PF00158 Sigma-54 interaction domain V429_RS10215 PF18024 Helix-turn-helix domain V429_RS10225 PF17152 Periplasmic sensor domain V429_RS10225 PF00990 Diguanylate cyclase, GGDEF domain V429_RS10230 PF00691 OmpA family V429_RS10235 PF03741 Integral membrane protein TerC family V429_RS10245 PF08891 YfcL protein V429_RS10250 PF00501 AMP-binding enzyme V429_RS10255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V429_RS10255 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region V429_RS10260 PF04172 LrgB-like family V429_RS10265 PF03788 LrgA family V429_RS10280 PF08411 Exonuclease C-terminal V429_RS10280 PF00929 Exonuclease V429_RS10285 PF11762 L-arabinose isomerase C-terminal domain V429_RS10285 PF02610 L-arabinose isomerase V429_RS10290 PF00596 Class II Aldolase and Adducin N-terminal domain V429_RS10295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V429_RS10300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS10305 PF00005 ABC transporter V429_RS10310 PF02653 Branched-chain amino acid transport system / permease component V429_RS10315 PF12833 Helix-turn-helix domain V429_RS10315 PF02311 AraC-like ligand binding domain V429_RS10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS10320 PF03466 LysR substrate binding domain V429_RS10325 PF02678 Pirin V429_RS10325 PF05726 Pirin C-terminal cupin domain V429_RS10330 PF00444 Ribosomal protein L36 V429_RS10335 PF01197 Ribosomal protein L31 V429_RS10350 PF01863 Protein of unknown function DUF45 V429_RS10365 PF03606 C4-dicarboxylate anaerobic carrier V429_RS10375 PF01266 FAD dependent oxidoreductase V429_RS10375 PF05430 S-adenosyl-L-methionine-dependent methyltransferase V429_RS10380 PF00109 Beta-ketoacyl synthase, N-terminal domain V429_RS10380 PF02801 Beta-ketoacyl synthase, C-terminal domain V429_RS10395 PF00285 Citrate synthase, C-terminal domain V429_RS10400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V429_RS10405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V429_RS10410 PF02910 Fumarate reductase flavoprotein C-term V429_RS10410 PF00890 FAD binding domain V429_RS10415 PF13085 2Fe-2S iron-sulfur cluster binding domain V429_RS10420 PF00676 Dehydrogenase E1 component V429_RS10420 PF02779 Transketolase, pyrimidine binding domain V429_RS10420 PF16870 2-oxoglutarate dehydrogenase C-terminal V429_RS10420 PF16078 2-oxoglutarate dehydrogenase N-terminus V429_RS10425 PF00364 Biotin-requiring enzyme V429_RS10425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V429_RS10425 PF02817 e3 binding domain V429_RS10430 PF00549 CoA-ligase V429_RS10430 PF08442 ATP-grasp domain V429_RS10435 PF02629 CoA binding domain V429_RS10435 PF00549 CoA-ligase V429_RS10445 PF03692 Putative zinc- or iron-chelating domain V429_RS10450 PF01266 FAD dependent oxidoreductase V429_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS10460 PF00005 ABC transporter V429_RS10470 PF07702 UTRA domain V429_RS10470 PF00392 Bacterial regulatory proteins, gntR family V429_RS10475 PF00266 Aminotransferase class-V V429_RS10480 PF00202 Aminotransferase class-III V429_RS10490 PF02901 Pyruvate formate lyase-like V429_RS10490 PF01228 Glycine radical V429_RS10495 PF01226 Formate/nitrite transporter V429_RS10500 PF18381 YcaO cyclodehydratase C-terminal domain V429_RS10500 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding V429_RS10505 PF00893 Small Multidrug Resistance protein V429_RS10510 PF01118 Semialdehyde dehydrogenase, NAD binding domain V429_RS10510 PF02774 Semialdehyde dehydrogenase, dimerisation domain V429_RS10515 PF00675 Insulinase (Peptidase family M16) V429_RS10515 PF05193 Peptidase M16 inactive domain V429_RS10520 PF01053 Cys/Met metabolism PLP-dependent enzyme V429_RS10530 PF13460 NAD(P)H-binding V429_RS10535 PF03466 LysR substrate binding domain V429_RS10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS10540 PF00106 short chain dehydrogenase V429_RS10545 PF12833 Helix-turn-helix domain V429_RS10550 PF07715 TonB-dependent Receptor Plug Domain V429_RS10550 PF00593 TonB dependent receptor V429_RS10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS10560 PF03466 LysR substrate binding domain V429_RS10565 PF01717 Cobalamin-independent synthase, Catalytic domain V429_RS10565 PF08267 Cobalamin-independent synthase, N-terminal domain V429_RS10575 PF00478 IMP dehydrogenase / GMP reductase domain V429_RS10575 PF00571 CBS domain V429_RS10580 PF07969 Amidohydrolase family V429_RS10590 PF01266 FAD dependent oxidoreductase V429_RS10595 PF04244 Deoxyribodipyrimidine photo-lyase-related protein V429_RS10600 PF01212 Beta-eliminating lyase V429_RS10605 PF00768 D-alanyl-D-alanine carboxypeptidase V429_RS10610 PF00293 NUDIX domain V429_RS10615 PF03918 Cytochrome C biogenesis protein V429_RS10620 PF08534 Redoxin V429_RS10625 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal V429_RS10625 PF01578 Cytochrome C assembly protein V429_RS10630 PF03916 Polysulphide reductase, NrfD V429_RS10635 PF13247 4Fe-4S dicluster domain V429_RS10635 PF00037 4Fe-4S binding domain V429_RS10640 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) V429_RS10640 PF13435 Cytochrome c554 and c-prime V429_RS10645 PF02335 Cytochrome c552 V429_RS10660 PF02754 Cysteine-rich domain V429_RS10660 PF13183 4Fe-4S dicluster domain V429_RS10665 PF00890 FAD binding domain V429_RS10670 PF01266 FAD dependent oxidoreductase V429_RS10670 PF04324 BFD-like [2Fe-2S] binding domain V429_RS10675 PF02810 SEC-C motif V429_RS10680 PF00672 HAMP domain V429_RS10680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS10680 PF17200 Single Cache domain 2 V429_RS10685 PF00480 ROK family V429_RS10685 PF01047 MarR family V429_RS10690 PF00989 PAS fold V429_RS10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS10690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain V429_RS10690 PF17203 Single cache domain 3 V429_RS10695 PF00072 Response regulator receiver domain V429_RS10695 PF12431 Transcriptional regulator V429_RS10695 PF08279 HTH domain V429_RS10700 PF01970 Tripartite tricarboxylate transporter TctA family V429_RS10715 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS10715 PF01464 Transglycosylase SLT domain V429_RS10720 PF02080 TrkA-C domain V429_RS10720 PF06826 Predicted Permease Membrane Region V429_RS10730 PF04851 Type III restriction enzyme, res subunit V429_RS10730 PF12344 Ultra-violet resistance protein B V429_RS10730 PF02151 UvrB/uvrC motif V429_RS10730 PF00271 Helicase conserved C-terminal domain V429_RS10730 PF17757 UvrB interaction domain V429_RS10740 PF09335 SNARE associated Golgi protein V429_RS10745 PF02600 Disulfide bond formation protein DsbB V429_RS10750 PF06450 Bacterial Na+/H+ antiporter B (NhaB) V429_RS10755 PF07840 FadR C-terminal domain V429_RS10755 PF00392 Bacterial regulatory proteins, gntR family V429_RS10760 PF04293 SpoVR like protein V429_RS10765 PF04285 Protein of unknown function (DUF444) V429_RS10770 PF06798 PrkA serine protein kinase C-terminal domain V429_RS10770 PF08298 PrkA AAA domain V429_RS10775 PF00270 DEAD/DEAH box helicase V429_RS10775 PF00271 Helicase conserved C-terminal domain V429_RS10775 PF00570 HRDC domain V429_RS10775 PF09382 RQC domain V429_RS10775 PF16124 RecQ zinc-binding V429_RS10780 PF00375 Sodium:dicarboxylate symporter family V429_RS10785 PF03222 Tryptophan/tyrosine permease family V429_RS10790 PF00293 NUDIX domain V429_RS10795 PF04715 Anthranilate synthase component I, N terminal region V429_RS10795 PF00425 chorismate binding enzyme V429_RS10815 PF00343 Carbohydrate phosphorylase V429_RS10820 PF00939 Sodium:sulfate symporter transmembrane region V429_RS10825 PF00085 Thioredoxin V429_RS10830 PF01627 Hpt domain V429_RS10830 PF00672 HAMP domain V429_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS10830 PF00512 His Kinase A (phospho-acceptor) domain V429_RS10830 PF00072 Response regulator receiver domain V429_RS10830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V429_RS10835 PF00664 ABC transporter transmembrane region V429_RS10835 PF00005 ABC transporter V429_RS10840 PF00664 ABC transporter transmembrane region V429_RS10840 PF00005 ABC transporter V429_RS10855 PF01575 MaoC like domain V429_RS10860 PF00561 alpha/beta hydrolase fold V429_RS10860 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus V429_RS10880 PF08543 Phosphomethylpyrimidine kinase V429_RS10885 PF03992 Antibiotic biosynthesis monooxygenase V429_RS10890 PF00465 Iron-containing alcohol dehydrogenase V429_RS10895 PF00583 Acetyltransferase (GNAT) family V429_RS10905 PF01928 CYTH domain V429_RS10915 PF02694 Uncharacterised BCR, YnfA/UPF0060 family V429_RS10925 PF13673 Acetyltransferase (GNAT) domain V429_RS10930 PF00270 DEAD/DEAH box helicase V429_RS10930 PF00271 Helicase conserved C-terminal domain V429_RS10935 PF00255 Glutathione peroxidase V429_RS10945 PF01820 D-ala D-ala ligase N-terminus V429_RS10945 PF07478 D-ala D-ala ligase C-terminus V429_RS10950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS10950 PF18029 Glyoxalase-like domain V429_RS10955 PF03942 DTW domain V429_RS10960 PF01925 Sulfite exporter TauE/SafE V429_RS10965 PF03466 LysR substrate binding domain V429_RS10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS10975 PF12833 Helix-turn-helix domain V429_RS10975 PF14525 AraC-binding-like domain V429_RS10980 PF11398 Protein of unknown function (DUF2813) V429_RS10990 PF00128 Alpha amylase, catalytic domain V429_RS10990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V429_RS11025 PF02789 Cytosol aminopeptidase family, N-terminal domain V429_RS11025 PF00883 Cytosol aminopeptidase family, catalytic domain V429_RS11030 PF13419 Haloacid dehalogenase-like hydrolase V429_RS11035 PF01546 Peptidase family M20/M25/M40 V429_RS11035 PF07687 Peptidase dimerisation domain V429_RS11040 PF00365 Phosphofructokinase V429_RS11045 PF00121 Triosephosphate isomerase V429_RS11050 PF02698 DUF218 domain V429_RS11055 PF13847 Methyltransferase domain V429_RS11060 PF03882 MukF winged-helix domain V429_RS11060 PF17193 MukF C-terminal domain V429_RS11060 PF17192 MukF middle domain V429_RS11065 PF04288 MukE-like family V429_RS11070 PF04310 MukB N-terminal V429_RS11070 PF16330 MukB hinge domain V429_RS11075 PF03330 Lytic transglycolase V429_RS11075 PF05036 Sporulation related domain V429_RS11090 PF01327 Polypeptide deformylase V429_RS11105 PF02567 Phenazine biosynthesis-like protein V429_RS11120 PF08274 PhnA Zinc-Ribbon V429_RS11120 PF03831 PhnA domain V429_RS11130 PF08329 Chitinase A, N-terminal domain V429_RS11130 PF00704 Glycosyl hydrolases family 18 V429_RS11145 PF00300 Histidine phosphatase superfamily (branch 1) V429_RS11150 PF08448 PAS fold V429_RS11150 PF00990 Diguanylate cyclase, GGDEF domain V429_RS11160 PF01713 Smr domain V429_RS11165 PF05175 Methyltransferase small domain V429_RS11170 PF01264 Chorismate synthase V429_RS11180 PF00270 DEAD/DEAH box helicase V429_RS11180 PF00271 Helicase conserved C-terminal domain V429_RS11195 PF03222 Tryptophan/tyrosine permease family V429_RS11200 PF00356 Bacterial regulatory proteins, lacI family V429_RS11200 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS11205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS11205 PF00381 PTS HPr component phosphorylation site V429_RS11210 PF00294 pfkB family carbohydrate kinase V429_RS11215 PF02378 Phosphotransferase system, EIIC V429_RS11215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V429_RS11220 PF06560 Glucose-6-phosphate isomerase (GPI) V429_RS11225 PF00356 Bacterial regulatory proteins, lacI family V429_RS11225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS11240 PF03830 PTS system sorbose subfamily IIB component V429_RS11240 PF03610 PTS system fructose IIA component V429_RS11245 PF03609 PTS system sorbose-specific iic component V429_RS11250 PF03613 PTS system mannose/fructose/sorbose family IID component V429_RS11260 PF06945 Protein of unknown function (DUF1289) V429_RS11265 PF03562 MltA specific insert domain V429_RS11265 PF06725 3D domain V429_RS11270 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS11275 PF00268 Ribonucleotide reductase, small chain V429_RS11280 PF03477 ATP cone domain V429_RS11280 PF02867 Ribonucleotide reductase, barrel domain V429_RS11280 PF00317 Ribonucleotide reductase, all-alpha domain V429_RS11285 PF13419 Haloacid dehalogenase-like hydrolase V429_RS11295 PF03989 DNA gyrase C-terminal domain, beta-propeller V429_RS11295 PF00521 DNA gyrase/topoisomerase IV, subunit A V429_RS11300 PF04055 Radical SAM superfamily V429_RS11310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V429_RS11310 PF03129 Anticodon binding domain V429_RS11310 PF02824 TGS domain V429_RS11310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V429_RS11315 PF05198 Translation initiation factor IF-3, N-terminal domain V429_RS11315 PF00707 Translation initiation factor IF-3, C-terminal domain V429_RS11320 PF01632 Ribosomal protein L35 V429_RS11325 PF00453 Ribosomal protein L20 V429_RS11330 PF01409 tRNA synthetases class II core domain (F) V429_RS11330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain V429_RS11335 PF03483 B3/4 domain V429_RS11335 PF03484 tRNA synthetase B5 domain V429_RS11335 PF03147 Ferredoxin-fold anticodon binding domain V429_RS11335 PF01588 Putative tRNA binding domain V429_RS11335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain V429_RS11340 PF00216 Bacterial DNA-binding protein V429_RS11345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS11345 PF00512 His Kinase A (phospho-acceptor) domain V429_RS11345 PF00072 Response regulator receiver domain V429_RS11345 PF09456 RcsC Alpha-Beta-Loop (ABL) V429_RS11360 PF02146 Sir2 family V429_RS11370 PF17152 Periplasmic sensor domain V429_RS11370 PF00990 Diguanylate cyclase, GGDEF domain V429_RS11375 PF00356 Bacterial regulatory proteins, lacI family V429_RS11380 PF00294 pfkB family carbohydrate kinase V429_RS11385 PF13407 Periplasmic binding protein domain V429_RS11390 PF02653 Branched-chain amino acid transport system / permease component V429_RS11395 PF00005 ABC transporter V429_RS11400 PF05025 RbsD / FucU transport protein family V429_RS11405 PF02798 Glutathione S-transferase, N-terminal domain V429_RS11405 PF14497 Glutathione S-transferase, C-terminal domain V429_RS11420 PF01171 PP-loop family V429_RS11425 PF00582 Universal stress protein family V429_RS11430 PF00027 Cyclic nucleotide-binding domain V429_RS11430 PF13545 Crp-like helix-turn-helix domain V429_RS11445 PF00403 Heavy-metal-associated domain V429_RS11455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V429_RS11455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP V429_RS11470 PF00115 Cytochrome C and Quinol oxidase polypeptide I V429_RS11480 PF13185 GAF domain V429_RS11485 PF17516 ProQ C-terminal domain V429_RS11485 PF04352 ProQ/FINO family V429_RS11490 PF11818 C-terminal domain of tail specific protease (DUF3340) V429_RS11490 PF17804 Tail specific protease N-terminal domain V429_RS11490 PF03572 Peptidase family S41 V429_RS11490 PF00595 PDZ domain V429_RS11495 PF11940 Domain of unknown function (DUF3458) Ig-like fold V429_RS11495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats V429_RS11495 PF01433 Peptidase family M1 domain V429_RS11505 PF05088 Bacterial NAD-glutamate dehydrogenase V429_RS11510 PF01180 Dihydroorotate dehydrogenase V429_RS11515 PF07126 Cell-division protein ZapC V429_RS11520 PF10672 S-adenosylmethionine-dependent methyltransferase V429_RS11520 PF02926 THUMP domain V429_RS11520 PF01170 Putative RNA methylase family UPF0020 V429_RS11530 PF12848 ABC transporter V429_RS11530 PF16326 ABC transporter C-terminal domain V429_RS11530 PF00005 ABC transporter V429_RS11540 PF07977 FabA-like domain V429_RS11545 PF05362 Lon protease (S16) C-terminal proteolytic domain V429_RS11545 PF13654 AAA domain V429_RS11555 PF07130 YebG protein V429_RS11565 PF00106 short chain dehydrogenase V429_RS11590 PF06974 Protein of unknown function (DUF1298) V429_RS11590 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain V429_RS11605 PF03972 MmgE/PrpD family V429_RS11610 PF00285 Citrate synthase, C-terminal domain V429_RS11625 PF04403 Paraquat-inducible protein A V429_RS11630 PF02470 MlaD protein V429_RS11635 PF01189 16S rRNA methyltransferase RsmB/F V429_RS11635 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF V429_RS11635 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF V429_RS11645 PF00589 Phage integrase family V429_RS11650 PF01026 TatD related DNase V429_RS11655 PF09115 DNA polymerase III, delta subunit, C terminal V429_RS11660 PF02223 Thymidylate kinase V429_RS11665 PF02618 YceG-like family V429_RS11670 PF01063 Amino-transferase class IV V429_RS11675 PF02801 Beta-ketoacyl synthase, C-terminal domain V429_RS11675 PF00109 Beta-ketoacyl synthase, N-terminal domain V429_RS11680 PF00550 Phosphopantetheine attachment site V429_RS11690 PF00698 Acyl transferase domain V429_RS11695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V429_RS11695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V429_RS11700 PF02504 Fatty acid synthesis protein V429_RS11705 PF01783 Ribosomal L32p protein family V429_RS11710 PF02620 Large ribosomal RNA subunit accumulation protein YceD V429_RS11720 PF03466 LysR substrate binding domain V429_RS11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS11725 PF07690 Major Facilitator Superfamily V429_RS11730 PF02545 Maf-like protein V429_RS11740 PF00849 RNA pseudouridylate synthase V429_RS11740 PF01479 S4 domain V429_RS11745 PF00575 S1 RNA binding domain V429_RS11745 PF12111 Polyribonucleotide phosphorylase C terminal V429_RS11745 PF10150 Ribonuclease E/G family V429_RS11750 PF01384 Phosphate transporter family V429_RS11755 PF00692 dUTPase V429_RS11760 PF00485 Phosphoribulokinase / Uridine kinase family V429_RS11765 PF10609 NUBPL iron-transfer P-loop NTPase V429_RS11770 PF01588 Putative tRNA binding domain V429_RS11770 PF09334 tRNA synthetases class I (M) V429_RS11770 PF08264 Anticodon-binding domain of tRNA V429_RS11775 PF00043 Glutathione S-transferase, C-terminal domain V429_RS11775 PF02798 Glutathione S-transferase, N-terminal domain V429_RS11780 PF00708 Acylphosphatase V429_RS11785 PF12729 Four helix bundle sensory module for signal transduction V429_RS11785 PF00672 HAMP domain V429_RS11785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS11790 PF10672 S-adenosylmethionine-dependent methyltransferase V429_RS11790 PF17785 PUA-like domain V429_RS11810 PF02769 AIR synthase related protein, C-terminal domain V429_RS11810 PF00586 AIR synthase related protein, N-terminal domain V429_RS11820 PF00753 Metallo-beta-lactamase superfamily V429_RS11825 PF00072 Response regulator receiver domain V429_RS11830 PF00512 His Kinase A (phospho-acceptor) domain V429_RS11830 PF00072 Response regulator receiver domain V429_RS11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS11830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V429_RS11830 PF00672 HAMP domain V429_RS11830 PF01627 Hpt domain V429_RS11835 PF01386 Ribosomal L25p family V429_RS11845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold V429_RS11845 PF00271 Helicase conserved C-terminal domain V429_RS11845 PF04408 Helicase associated domain (HA2) V429_RS11845 PF11898 Domain of unknown function (DUF3418) V429_RS11845 PF00270 DEAD/DEAH box helicase V429_RS11850 PF00571 CBS domain V429_RS11850 PF01368 DHH family V429_RS11850 PF02272 DHHA1 domain V429_RS11850 PF01743 Poly A polymerase head domain V429_RS11855 PF00072 Response regulator receiver domain V429_RS11855 PF00196 Bacterial regulatory proteins, luxR family V429_RS11865 PF02575 YbaB/EbfC DNA-binding family V429_RS11870 PF12169 DNA polymerase III subunits gamma and tau domain III V429_RS11870 PF12170 DNA polymerase III tau subunit V interacting with alpha V429_RS11870 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding V429_RS11875 PF00156 Phosphoribosyl transferase domain V429_RS11880 PF04304 Protein of unknown function (DUF454) V429_RS11885 PF01207 Dihydrouridine synthase (Dus) V429_RS11895 PF13408 Recombinase zinc beta ribbon domain V429_RS11895 PF07508 Recombinase V429_RS11895 PF00239 Resolvase, N terminal domain V429_RS11905 PF00239 Resolvase, N terminal domain V429_RS11905 PF02796 Helix-turn-helix domain of resolvase V429_RS11995 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS12000 PF01612 3'-5' exonuclease V429_RS12000 PF00570 HRDC domain V429_RS12005 PF00501 AMP-binding enzyme V429_RS12005 PF13193 AMP-binding enzyme C-terminal domain V429_RS12010 PF08241 Methyltransferase domain V429_RS12010 PF12697 Alpha/beta hydrolase family V429_RS12020 PF00814 Glycoprotease family V429_RS12025 PF04851 Type III restriction enzyme, res subunit V429_RS12025 PF13307 Helicase C-terminal domain V429_RS12035 PF01634 ATP phosphoribosyltransferase V429_RS12035 PF08029 HisG, C-terminal domain V429_RS12040 PF00815 Histidinol dehydrogenase V429_RS12045 PF00155 Aminotransferase class I and II V429_RS12050 PF00475 Imidazoleglycerol-phosphate dehydratase V429_RS12050 PF08645 Polynucleotide kinase 3 phosphatase V429_RS12055 PF00117 Glutamine amidotransferase class-I V429_RS12060 PF00977 Histidine biosynthesis protein V429_RS12065 PF00072 Response regulator receiver domain V429_RS12070 PF00990 Diguanylate cyclase, GGDEF domain V429_RS12070 PF08448 PAS fold V429_RS12075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS12075 PF01627 Hpt domain V429_RS12075 PF00072 Response regulator receiver domain V429_RS12075 PF00512 His Kinase A (phospho-acceptor) domain V429_RS12080 PF00977 Histidine biosynthesis protein V429_RS12085 PF01502 Phosphoribosyl-AMP cyclohydrolase V429_RS12085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase V429_RS12090 PF00501 AMP-binding enzyme V429_RS12090 PF13193 AMP-binding enzyme C-terminal domain V429_RS12095 PF03606 C4-dicarboxylate anaerobic carrier V429_RS12105 PF05433 Glycine zipper 2TM domain V429_RS12115 PF01799 [2Fe-2S] binding domain V429_RS12115 PF00111 2Fe-2S iron-sulfur cluster binding domain V429_RS12120 PF03450 CO dehydrogenase flavoprotein C-terminal domain V429_RS12120 PF00941 FAD binding domain in molybdopterin dehydrogenase V429_RS12125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V429_RS12125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase V429_RS12130 PF00860 Permease family V429_RS12135 PF01979 Amidohydrolase family V429_RS12140 PF00860 Permease family V429_RS12145 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V429_RS12145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase V429_RS12145 PF01799 [2Fe-2S] binding domain V429_RS12150 PF00941 FAD binding domain in molybdopterin dehydrogenase V429_RS12155 PF01979 Amidohydrolase family V429_RS12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS12160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V429_RS12165 PF12804 MobA-like NTP transferase domain V429_RS12175 PF02625 XdhC and CoxI family V429_RS12175 PF13478 XdhC Rossmann domain V429_RS12180 PF00892 EamA-like transporter family V429_RS12185 PF00696 Amino acid kinase family V429_RS12190 PF01979 Amidohydrolase family V429_RS12195 PF07687 Peptidase dimerisation domain V429_RS12195 PF01546 Peptidase family M20/M25/M40 V429_RS12200 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS12205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V429_RS12205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V429_RS12210 PF00158 Sigma-54 interaction domain V429_RS12210 PF02954 Bacterial regulatory protein, Fis family V429_RS12210 PF13188 PAS domain V429_RS12215 PF10123 Mu-like prophage I protein V429_RS12240 PF07152 YaeQ protein V429_RS12245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V429_RS12245 PF00378 Enoyl-CoA hydratase/isomerase V429_RS12245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V429_RS12250 PF00108 Thiolase, N-terminal domain V429_RS12250 PF02803 Thiolase, C-terminal domain V429_RS12255 PF17863 AAA lid domain V429_RS12255 PF07726 ATPase family associated with various cellular activities (AAA) V429_RS12260 PF01882 Protein of unknown function DUF58 V429_RS12285 PF08281 Sigma-70, region 4 V429_RS12285 PF04542 Sigma-70 region 2 V429_RS12295 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V429_RS12305 PF08668 HDOD domain V429_RS12305 PF00563 EAL domain V429_RS12310 PF00108 Thiolase, N-terminal domain V429_RS12310 PF02803 Thiolase, C-terminal domain V429_RS12315 PF00376 MerR family regulatory protein V429_RS12315 PF09278 MerR, DNA binding V429_RS12320 PF00375 Sodium:dicarboxylate symporter family V429_RS12325 PF06865 Pyrimidine/purine nucleoside phosphorylase V429_RS12330 PF03315 Serine dehydratase beta chain V429_RS12330 PF03313 Serine dehydratase alpha chain V429_RS12335 PF03313 Serine dehydratase alpha chain V429_RS12335 PF03315 Serine dehydratase beta chain V429_RS12340 PF13406 Transglycosylase SLT domain V429_RS12345 PF05166 YcgL domain V429_RS12350 PF05209 Septum formation inhibitor MinC, N-terminal domain V429_RS12350 PF03775 Septum formation inhibitor MinC, C-terminal domain V429_RS12355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain V429_RS12360 PF03776 Septum formation topological specificity factor MinE V429_RS12365 PF04269 Protein of unknown function, DUF440 V429_RS12370 PF00912 Transglycosylase V429_RS12375 PF04269 Protein of unknown function, DUF440 V429_RS12385 PF17783 CvfB-like winged helix domain V429_RS12385 PF13509 S1 domain V429_RS12410 PF02525 Flavodoxin-like fold V429_RS12415 PF00892 EamA-like transporter family V429_RS12420 PF02222 ATP-grasp domain V429_RS12420 PF01370 NAD dependent epimerase/dehydratase family V429_RS12425 PF13419 Haloacid dehalogenase-like hydrolase V429_RS12435 PF00677 Lumazine binding domain V429_RS12440 PF06786 Uncharacterised protein family (UPF0253) V429_RS12445 PF01554 MatE V429_RS12465 PF00136 DNA polymerase family B V429_RS12465 PF03104 DNA polymerase family B, exonuclease domain V429_RS12475 PF17151 Periplasmic sensor domain V429_RS12475 PF00990 Diguanylate cyclase, GGDEF domain V429_RS12490 PF03279 Bacterial lipid A biosynthesis acyltransferase V429_RS12495 PF03279 Bacterial lipid A biosynthesis acyltransferase V429_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS12505 PF03466 LysR substrate binding domain V429_RS12510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V429_RS12510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V429_RS12515 PF01261 Xylose isomerase-like TIM barrel V429_RS12520 PF03466 LysR substrate binding domain V429_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS12530 PF01966 HD domain V429_RS12540 PF13188 PAS domain V429_RS12540 PF00990 Diguanylate cyclase, GGDEF domain V429_RS12540 PF00563 EAL domain V429_RS12540 PF03707 Bacterial signalling protein N terminal repeat V429_RS12545 PF00232 Glycosyl hydrolase family 1 V429_RS12550 PF03466 LysR substrate binding domain V429_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS12555 PF07694 5TMR of 5TMR-LYT V429_RS12555 PF00990 Diguanylate cyclase, GGDEF domain V429_RS12560 PF00248 Aldo/keto reductase family V429_RS12570 PF00248 Aldo/keto reductase family V429_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS12575 PF03466 LysR substrate binding domain V429_RS12585 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region V429_RS12585 PF07676 WD40-like Beta Propeller Repeat V429_RS12585 PF00326 Prolyl oligopeptidase family V429_RS12590 PF12146 Serine aminopeptidase, S33 V429_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS12595 PF03466 LysR substrate binding domain V429_RS12605 PF00239 Resolvase, N terminal domain V429_RS12605 PF02796 Helix-turn-helix domain of resolvase V429_RS12615 PF04002 RadC-like JAB domain V429_RS12625 PF00563 EAL domain V429_RS12625 PF08448 PAS fold V429_RS12625 PF00990 Diguanylate cyclase, GGDEF domain V429_RS12645 PF01925 Sulfite exporter TauE/SafE V429_RS12650 PF13520 Amino acid permease V429_RS12660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase V429_RS12660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase V429_RS12665 PF00378 Enoyl-CoA hydratase/isomerase V429_RS12670 PF00378 Enoyl-CoA hydratase/isomerase V429_RS12675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V429_RS12675 PF02770 Acyl-CoA dehydrogenase, middle domain V429_RS12675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V429_RS12680 PF00171 Aldehyde dehydrogenase family V429_RS12685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V429_RS12685 PF02770 Acyl-CoA dehydrogenase, middle domain V429_RS12685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V429_RS12690 PF01039 Carboxyl transferase domain V429_RS12695 PF00378 Enoyl-CoA hydratase/isomerase V429_RS12700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V429_RS12700 PF00364 Biotin-requiring enzyme V429_RS12700 PF00289 Biotin carboxylase, N-terminal domain V429_RS12700 PF02785 Biotin carboxylase C-terminal domain V429_RS12705 PF00682 HMGL-like V429_RS12710 PF09278 MerR, DNA binding V429_RS12710 PF00376 MerR family regulatory protein V429_RS12725 PF01184 GPR1/FUN34/yaaH family V429_RS12730 PF06167 Glucose-regulated metallo-peptidase M90 V429_RS12740 PF01235 Sodium:alanine symporter family V429_RS12775 PF00378 Enoyl-CoA hydratase/isomerase V429_RS12790 PF04341 Protein of unknown function, DUF485 V429_RS12795 PF00474 Sodium:solute symporter family V429_RS12800 PF12848 ABC transporter V429_RS12800 PF00005 ABC transporter V429_RS12805 PF13145 PPIC-type PPIASE domain V429_RS12815 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS12815 PF05362 Lon protease (S16) C-terminal proteolytic domain V429_RS12815 PF02190 ATP-dependent protease La (LON) substrate-binding domain V429_RS12820 PF07724 AAA domain (Cdc48 subfamily) V429_RS12820 PF10431 C-terminal, D2-small domain, of ClpB protein V429_RS12820 PF06689 ClpX C4-type zinc finger V429_RS12825 PF00574 Clp protease V429_RS12830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS12830 PF05697 Bacterial trigger factor protein (TF) V429_RS12830 PF05698 Bacterial trigger factor protein (TF) C-terminus V429_RS12845 PF02687 FtsX-like permease family V429_RS12845 PF12704 MacB-like periplasmic core domain V429_RS12850 PF00005 ABC transporter V429_RS12855 PF02687 FtsX-like permease family V429_RS12855 PF12704 MacB-like periplasmic core domain V429_RS12865 PF00271 Helicase conserved C-terminal domain V429_RS12865 PF03461 TRCF domain V429_RS12865 PF17757 UvrB interaction domain V429_RS12865 PF02559 CarD-like/TRCF domain V429_RS12865 PF00270 DEAD/DEAH box helicase V429_RS12870 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain V429_RS12875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS12880 PF00892 EamA-like transporter family V429_RS12890 PF00300 Histidine phosphatase superfamily (branch 1) V429_RS12895 PF00675 Insulinase (Peptidase family M16) V429_RS12895 PF05193 Peptidase M16 inactive domain V429_RS12900 PF05724 Thiopurine S-methyltransferase (TPMT) V429_RS12915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V429_RS12915 PF12833 Helix-turn-helix domain V429_RS12915 PF02805 Metal binding domain of Ada V429_RS12915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V429_RS12975 PF13356 Arm DNA-binding domain V429_RS12975 PF00589 Phage integrase family V429_RS12980 PF00958 GMP synthase C terminal domain V429_RS12980 PF00117 Glutamine amidotransferase class-I V429_RS12980 PF02540 NAD synthase V429_RS12985 PF00478 IMP dehydrogenase / GMP reductase domain V429_RS12985 PF00571 CBS domain V429_RS12990 PF02705 K+ potassium transporter V429_RS13000 PF01618 MotA/TolQ/ExbB proton channel family V429_RS13005 PF02472 Biopolymer transport protein ExbD/TolR V429_RS13010 PF00892 EamA-like transporter family V429_RS13015 PF02601 Exonuclease VII, large subunit V429_RS13015 PF13742 OB-fold nucleic acid binding domain V429_RS13020 PF04055 Radical SAM superfamily V429_RS13025 PF00672 HAMP domain V429_RS13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS13030 PF00793 DAHP synthetase I family V429_RS13035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V429_RS13040 PF00266 Aminotransferase class-V V429_RS13045 PF00766 Electron transfer flavoprotein FAD-binding domain V429_RS13045 PF01012 Electron transfer flavoprotein domain V429_RS13050 PF01012 Electron transfer flavoprotein domain V429_RS13060 PF01544 CorA-like Mg2+ transporter protein V429_RS13065 PF11143 Protein of unknown function (DUF2919) V429_RS13080 PF07715 TonB-dependent Receptor Plug Domain V429_RS13080 PF00593 TonB dependent receptor V429_RS13085 PF01032 FecCD transport family V429_RS13090 PF01032 FecCD transport family V429_RS13095 PF00005 ABC transporter V429_RS13100 PF17837 4'-phosphopantetheinyl transferase N-terminal domain V429_RS13100 PF01648 4'-phosphopantetheinyl transferase superfamily V429_RS13105 PF01497 Periplasmic binding protein V429_RS13110 PF00975 Thioesterase domain V429_RS13110 PF00501 AMP-binding enzyme V429_RS13110 PF13193 AMP-binding enzyme C-terminal domain V429_RS13110 PF00668 Condensation domain V429_RS13110 PF00550 Phosphopantetheine attachment site V429_RS13115 PF13193 AMP-binding enzyme C-terminal domain V429_RS13115 PF00668 Condensation domain V429_RS13115 PF07993 Male sterility protein V429_RS13115 PF00550 Phosphopantetheine attachment site V429_RS13115 PF00501 AMP-binding enzyme V429_RS13125 PF00975 Thioesterase domain V429_RS13125 PF00501 AMP-binding enzyme V429_RS13125 PF13193 AMP-binding enzyme C-terminal domain V429_RS13125 PF00668 Condensation domain V429_RS13125 PF00550 Phosphopantetheine attachment site V429_RS13130 PF00550 Phosphopantetheine attachment site V429_RS13130 PF00857 Isochorismatase family V429_RS13135 PF00501 AMP-binding enzyme V429_RS13135 PF13193 AMP-binding enzyme C-terminal domain V429_RS13140 PF00425 chorismate binding enzyme V429_RS13145 PF07273 Protein of unknown function (DUF1439) V429_RS13155 PF00483 Nucleotidyl transferase V429_RS13175 PF00294 pfkB family carbohydrate kinase V429_RS13185 PF00762 Ferrochelatase V429_RS13190 PF05191 Adenylate kinase, active site lid V429_RS13195 PF00183 Hsp90 protein V429_RS13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS13200 PF02132 RecR protein V429_RS13200 PF13662 Toprim domain V429_RS13205 PF02634 FdhD/NarQ family V429_RS13210 PF01590 GAF domain V429_RS13210 PF02954 Bacterial regulatory protein, Fis family V429_RS13210 PF00158 Sigma-54 interaction domain V429_RS13220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS13220 PF00384 Molybdopterin oxidoreductase V429_RS13220 PF01568 Molydopterin dinucleotide binding domain V429_RS13225 PF01568 Molydopterin dinucleotide binding domain V429_RS13225 PF00384 Molybdopterin oxidoreductase V429_RS13225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS13230 PF13247 4Fe-4S dicluster domain V429_RS13230 PF12800 4Fe-4S binding domain V429_RS13235 PF02705 K+ potassium transporter V429_RS13240 PF00037 4Fe-4S binding domain V429_RS13240 PF12798 4Fe-4S binding domain V429_RS13245 PF00361 Proton-conducting membrane transporter V429_RS13250 PF00146 NADH dehydrogenase V429_RS13255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit V429_RS13255 PF00374 Nickel-dependent hydrogenase V429_RS13255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit V429_RS13260 PF12838 4Fe-4S dicluster domain V429_RS13265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V429_RS13270 PF07450 Formate hydrogenlyase maturation protein HycH V429_RS13275 PF01750 Hydrogenase maturation protease V429_RS13280 PF03841 L-seryl-tRNA selenium transferase V429_RS13280 PF12390 Selenocysteine synthase N terminal V429_RS13285 PF00009 Elongation factor Tu GTP binding domain V429_RS13285 PF09107 Elongation factor SelB, winged helix V429_RS13285 PF09106 Elongation factor SelB, winged helix V429_RS13285 PF09105 Elongation factor SelB, winged helix V429_RS13285 PF03144 Elongation factor Tu domain 2 V429_RS13290 PF01300 Telomere recombination V429_RS13290 PF07503 HypF finger V429_RS13290 PF00708 Acylphosphatase V429_RS13290 PF17788 HypF Kae1-like domain V429_RS13295 PF01455 HupF/HypC family V429_RS13300 PF01924 Hydrogenase formation hypA family V429_RS13305 PF00586 AIR synthase related protein, N-terminal domain V429_RS13305 PF02769 AIR synthase related protein, C-terminal domain V429_RS13310 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA V429_RS13315 PF02492 CobW/HypB/UreG, nucleotide-binding domain V429_RS13320 PF08402 TOBE domain V429_RS13320 PF00005 ABC transporter V429_RS13325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS13325 PF00005 ABC transporter V429_RS13330 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS13340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS13345 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE V429_RS13350 PF01750 Hydrogenase maturation protease V429_RS13355 PF00374 Nickel-dependent hydrogenase V429_RS13360 PF03916 Polysulphide reductase, NrfD V429_RS13365 PF13247 4Fe-4S dicluster domain V429_RS13370 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal V429_RS13370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V429_RS13375 PF00072 Response regulator receiver domain V429_RS13385 PF02895 Signal transducing histidine kinase, homodimeric domain V429_RS13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS13385 PF09078 CheY binding V429_RS13385 PF01584 CheW-like domain V429_RS13385 PF01627 Hpt domain V429_RS13390 PF17202 Single cache domain 3 V429_RS13390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS13390 PF00672 HAMP domain V429_RS13395 PF01584 CheW-like domain V429_RS13400 PF03705 CheR methyltransferase, all-alpha domain V429_RS13400 PF01739 CheR methyltransferase, SAM binding domain V429_RS13405 PF00072 Response regulator receiver domain V429_RS13405 PF01339 CheB methylesterase V429_RS13410 PF00563 EAL domain V429_RS13410 PF00990 Diguanylate cyclase, GGDEF domain V429_RS13410 PF03707 Bacterial signalling protein N terminal repeat V429_RS13415 PF00672 HAMP domain V429_RS13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS13415 PF12729 Four helix bundle sensory module for signal transduction V429_RS13420 PF00842 Alanine racemase, C-terminal domain V429_RS13420 PF01168 Alanine racemase, N-terminal domain V429_RS13435 PF13276 HTH-like domain V429_RS13435 PF00665 Integrase core domain V429_RS13435 PF13333 Integrase core domain V429_RS13445 PF01527 Transposase V429_RS13455 PF01527 Transposase V429_RS13490 PF00916 Sulfate permease family V429_RS13490 PF01740 STAS domain V429_RS13505 PF03350 Uncharacterized protein family, UPF0114 V429_RS13520 PF03239 Iron permease FTR1 family V429_RS13525 PF01593 Flavin containing amine oxidoreductase V429_RS13540 PF07690 Major Facilitator Superfamily V429_RS13550 PF00005 ABC transporter V429_RS13555 PF12704 MacB-like periplasmic core domain V429_RS13555 PF02687 FtsX-like permease family V429_RS13565 PF01565 FAD binding domain V429_RS13565 PF02913 FAD linked oxidases, C-terminal domain V429_RS13570 PF02589 LUD domain V429_RS13575 PF02589 LUD domain V429_RS13575 PF13183 4Fe-4S dicluster domain V429_RS13575 PF11870 Domain of unknown function (DUF3390) V429_RS13580 PF02754 Cysteine-rich domain V429_RS13585 PF02652 L-lactate permease V429_RS13590 PF03466 LysR substrate binding domain V429_RS13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS13600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS13605 PF00561 alpha/beta hydrolase fold V429_RS13630 PF01625 Peptide methionine sulfoxide reductase V429_RS13635 PF00583 Acetyltransferase (GNAT) family V429_RS13635 PF00696 Amino acid kinase family V429_RS13640 PF01842 ACT domain V429_RS13640 PF00696 Amino acid kinase family V429_RS13650 PF00884 Sulfatase V429_RS13655 PF02016 LD-carboxypeptidase N-terminal domain V429_RS13655 PF17676 LD-carboxypeptidase C-terminal domain V429_RS13660 PF01734 Patatin-like phospholipase V429_RS13665 PF17179 4Fe-4S dicluster domain V429_RS13670 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B V429_RS13670 PF00175 Oxidoreductase NAD-binding domain V429_RS13675 PF13187 4Fe-4S dicluster domain V429_RS13675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V429_RS13675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V429_RS13680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V429_RS13680 PF10414 Sirohaem synthase dimerisation region V429_RS13680 PF14824 Sirohaem biosynthesis protein central V429_RS13690 PF01906 Putative heavy-metal-binding V429_RS13710 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS13715 PF05728 Uncharacterised protein family (UPF0227) V429_RS13720 PF00860 Permease family V429_RS13725 PF01432 Peptidase family M3 V429_RS13725 PF08439 Oligopeptidase F V429_RS13730 PF01432 Peptidase family M3 V429_RS13730 PF08439 Oligopeptidase F V429_RS13735 PF05661 Protein of unknown function (DUF808) V429_RS13745 PF02355 Protein export membrane protein V429_RS13745 PF07549 SecD/SecF GG Motif V429_RS13750 PF07549 SecD/SecF GG Motif V429_RS13750 PF13721 SecD export protein N-terminal TM region V429_RS13750 PF02355 Protein export membrane protein V429_RS13785 PF01230 HIT domain V429_RS13790 PF00672 HAMP domain V429_RS13790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS13800 PF01979 Amidohydrolase family V429_RS13815 PF00375 Sodium:dicarboxylate symporter family V429_RS13825 PF00842 Alanine racemase, C-terminal domain V429_RS13825 PF01168 Alanine racemase, N-terminal domain V429_RS13830 PF03741 Integral membrane protein TerC family V429_RS13835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS13835 PF00005 ABC transporter V429_RS13845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS13845 PF00005 ABC transporter V429_RS13850 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS13855 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS13860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS13865 PF01914 MarC family integral membrane protein V429_RS13875 PF00171 Aldehyde dehydrogenase family V429_RS13875 PF00465 Iron-containing alcohol dehydrogenase V429_RS13880 PF01966 HD domain V429_RS13885 PF06580 Histidine kinase V429_RS13885 PF07694 5TMR of 5TMR-LYT V429_RS13890 PF00072 Response regulator receiver domain V429_RS13890 PF04397 LytTr DNA-binding domain V429_RS13895 PF02554 Carbon starvation protein CstA V429_RS13900 PF11742 Protein of unknown function (DUF3302) V429_RS13905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS13905 PF00529 HlyD membrane-fusion protein of T1SS V429_RS13910 PF04851 Type III restriction enzyme, res subunit V429_RS13910 PF00271 Helicase conserved C-terminal domain V429_RS13915 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family V429_RS13920 PF00462 Glutaredoxin V429_RS13930 PF00155 Aminotransferase class I and II V429_RS13935 PF03606 C4-dicarboxylate anaerobic carrier V429_RS13940 PF12241 Trans-2-enoyl-CoA reductase catalytic region V429_RS13940 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V429_RS13940 PF07055 Enoyl reductase FAD binding domain V429_RS13945 PF13426 PAS domain V429_RS13945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS13945 PF08447 PAS fold V429_RS13955 PF00892 EamA-like transporter family V429_RS13960 PF02508 Rnf-Nqr subunit, membrane protein V429_RS13965 PF04060 Putative Fe-S cluster V429_RS13970 PF10531 SLBB domain V429_RS13970 PF12838 4Fe-4S dicluster domain V429_RS13970 PF13375 RnfC Barrel sandwich hybrid domain V429_RS13970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit V429_RS13975 PF03116 NQR2, RnfD, RnfE family V429_RS13980 PF04205 FMN-binding domain V429_RS13985 PF02508 Rnf-Nqr subunit, membrane protein V429_RS13990 PF00633 Helix-hairpin-helix motif V429_RS13990 PF00730 HhH-GPD superfamily base excision DNA repair protein V429_RS13990 PF10576 Iron-sulfur binding domain of endonuclease III V429_RS13995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS14000 PF18393 MotY N-terminal domain V429_RS14000 PF00691 OmpA family V429_RS14005 PF00672 HAMP domain V429_RS14005 PF12729 Four helix bundle sensory module for signal transduction V429_RS14005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS14010 PF00929 Exonuclease V429_RS14015 PF03553 Na+/H+ antiporter family V429_RS14015 PF13726 Na+-H+ antiporter family V429_RS14020 PF00271 Helicase conserved C-terminal domain V429_RS14020 PF00270 DEAD/DEAH box helicase V429_RS14020 PF03880 DbpA RNA binding domain V429_RS14025 PF03061 Thioesterase superfamily V429_RS14035 PF02913 FAD linked oxidases, C-terminal domain V429_RS14035 PF13183 4Fe-4S dicluster domain V429_RS14035 PF01565 FAD binding domain V429_RS14045 PF03741 Integral membrane protein TerC family V429_RS14045 PF03471 Transporter associated domain V429_RS14050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V429_RS14055 PF00962 Adenosine/AMP deaminase V429_RS14060 PF13344 Haloacid dehalogenase-like hydrolase V429_RS14065 PF00999 Sodium/hydrogen exchanger family V429_RS14065 PF02254 TrkA-N domain V429_RS14075 PF13537 Glutamine amidotransferase domain V429_RS14075 PF00733 Asparagine synthase V429_RS14085 PF13417 Glutathione S-transferase, N-terminal domain V429_RS14085 PF00043 Glutathione S-transferase, C-terminal domain V429_RS14090 PF14497 Glutathione S-transferase, C-terminal domain V429_RS14090 PF02798 Glutathione S-transferase, N-terminal domain V429_RS14100 PF04209 homogentisate 1,2-dioxygenase V429_RS14105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS14115 PF00849 RNA pseudouridylate synthase V429_RS14120 PF00563 EAL domain V429_RS14120 PF00990 Diguanylate cyclase, GGDEF domain V429_RS14120 PF13426 PAS domain V429_RS14125 PF08447 PAS fold V429_RS14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS14135 PF09924 Uncharacterised conserved protein (DUF2156) V429_RS14135 PF03706 Lysylphosphatidylglycerol synthase TM region V429_RS14145 PF00884 Sulfatase V429_RS14145 PF08019 Phosphoethanolamine transferase EptA/EptB V429_RS14165 PF01027 Inhibitor of apoptosis-promoting Bax1 V429_RS14170 PF12805 FUSC-like inner membrane protein yccS V429_RS14175 PF04358 DsrC like protein V429_RS14180 PF05036 Sporulation related domain V429_RS14185 PF02875 Mur ligase family, glutamate ligase domain V429_RS14185 PF08245 Mur ligase middle domain V429_RS14190 PF17848 Acetyl-coA carboxylase zinc finger domain V429_RS14190 PF01039 Carboxyl transferase domain V429_RS14195 PF01416 tRNA pseudouridine synthase V429_RS14205 PF01118 Semialdehyde dehydrogenase, NAD binding domain V429_RS14205 PF02774 Semialdehyde dehydrogenase, dimerisation domain V429_RS14210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS14210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V429_RS14210 PF11890 Domain of unknown function (DUF3410) V429_RS14215 PF01569 PAP2 superfamily V429_RS14220 PF03180 NLPA lipoprotein V429_RS14225 PF07969 Amidohydrolase family V429_RS14245 PF00082 Subtilase family V429_RS14245 PF01483 Proprotein convertase P-domain V429_RS14255 PF01915 Glycosyl hydrolase family 3 C-terminal domain V429_RS14255 PF00933 Glycosyl hydrolase family 3 N terminal domain V429_RS14255 PF14310 Fibronectin type III-like domain V429_RS14265 PF00391 PEP-utilising enzyme, mobile domain V429_RS14265 PF02896 PEP-utilising enzyme, TIM barrel domain V429_RS14265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain V429_RS14270 PF03618 Kinase/pyrophosphorylase V429_RS14280 PF00324 Amino acid permease V429_RS14335 PF00664 ABC transporter transmembrane region V429_RS14335 PF00005 ABC transporter V429_RS14335 PF03412 Peptidase C39 family V429_RS14340 PF16199 Radical_SAM C-terminal domain V429_RS14340 PF04055 Radical SAM superfamily V429_RS14345 PF01645 Conserved region in glutamate synthase V429_RS14345 PF01493 GXGXG motif V429_RS14345 PF04898 Glutamate synthase central domain V429_RS14345 PF00310 Glutamine amidotransferases class-II V429_RS14350 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS14350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V429_RS14355 PF00005 ABC transporter V429_RS14360 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS14365 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS14380 PF09278 MerR, DNA binding V429_RS14380 PF00376 MerR family regulatory protein V429_RS14395 PF14521 Lysine-specific metallo-endopeptidase V429_RS14405 PF00270 DEAD/DEAH box helicase V429_RS14405 PF00271 Helicase conserved C-terminal domain V429_RS14410 PF13302 Acetyltransferase (GNAT) domain V429_RS14435 PF07759 Protein of unknown function (DUF1615) V429_RS14440 PF08502 LeuA allosteric (dimerisation) domain V429_RS14440 PF00682 HMGL-like V429_RS14445 PF02142 MGS-like domain V429_RS14445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V429_RS14445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V429_RS14450 PF00117 Glutamine amidotransferase class-I V429_RS14450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain V429_RS14455 PF05173 Dihydrodipicolinate reductase, C-terminus V429_RS14455 PF01113 Dihydrodipicolinate reductase, N-terminus V429_RS14465 PF01812 5-formyltetrahydrofolate cyclo-ligase family V429_RS14470 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) V429_RS14475 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) V429_RS14480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V429_RS14480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS14480 PF01842 ACT domain V429_RS14485 PF01219 Prokaryotic diacylglycerol kinase V429_RS14490 PF00793 DAHP synthetase I family V429_RS14495 PF00583 Acetyltransferase (GNAT) family V429_RS14500 PF00005 ABC transporter V429_RS14505 PF01032 FecCD transport family V429_RS14510 PF00989 PAS fold V429_RS14510 PF00072 Response regulator receiver domain V429_RS14510 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS14510 PF01627 Hpt domain V429_RS14510 PF00512 His Kinase A (phospho-acceptor) domain V429_RS14520 PF00437 Type II/IV secretion system protein V429_RS14525 PF00483 Nucleotidyl transferase V429_RS14540 PF02421 Ferrous iron transport protein B V429_RS14540 PF07670 Nucleoside recognition V429_RS14540 PF07664 Ferrous iron transport protein B C terminus V429_RS14550 PF01253 Translation initiation factor SUI1 V429_RS14555 PF01169 Uncharacterized protein family UPF0016 V429_RS14585 PF00990 Diguanylate cyclase, GGDEF domain V429_RS14585 PF13185 GAF domain V429_RS14600 PF09190 DALR domain V429_RS14600 PF01406 tRNA synthetases class I (C) catalytic domain V429_RS14605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V429_RS14615 PF00149 Calcineurin-like phosphoesterase V429_RS14620 PF03916 Polysulphide reductase, NrfD V429_RS14625 PF13247 4Fe-4S dicluster domain V429_RS14625 PF00037 4Fe-4S binding domain V429_RS14645 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) V429_RS14650 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB V429_RS14660 PF01757 Acyltransferase family V429_RS14695 PF13276 HTH-like domain V429_RS14695 PF00665 Integrase core domain V429_RS14700 PF01527 Transposase V429_RS14705 PF05598 Transposase domain (DUF772) V429_RS14705 PF01609 Transposase DDE domain V429_RS14710 PF04962 KduI/IolB family V429_RS14715 PF01261 Xylose isomerase-like TIM barrel V429_RS14720 PF00294 pfkB family carbohydrate kinase V429_RS14725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V429_RS14725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V429_RS14730 PF02653 Branched-chain amino acid transport system / permease component V429_RS14735 PF00005 ABC transporter V429_RS14740 PF13407 Periplasmic binding protein domain V429_RS14745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V429_RS14745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V429_RS14755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V429_RS14755 PF00205 Thiamine pyrophosphate enzyme, central domain V429_RS14755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS14765 PF00171 Aldehyde dehydrogenase family V429_RS14775 PF13817 IS66 C-terminal element V429_RS14775 PF13005 zinc-finger binding domain of transposase IS66 V429_RS14775 PF13007 Transposase C of IS166 homeodomain V429_RS14775 PF03050 Transposase IS66 family V429_RS14795 PF13356 Arm DNA-binding domain V429_RS14795 PF00589 Phage integrase family V429_RS14815 PF01066 CDP-alcohol phosphatidyltransferase V429_RS14820 PF02151 UvrB/uvrC motif V429_RS14820 PF08459 UvrC Helix-hairpin-helix N-terminal V429_RS14820 PF01541 GIY-YIG catalytic domain V429_RS14825 PF00196 Bacterial regulatory proteins, luxR family V429_RS14825 PF00072 Response regulator receiver domain V429_RS14830 PF02348 Cytidylyltransferase V429_RS14835 PF03966 Trm112p-like protein V429_RS14840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase V429_RS14845 PF00005 ABC transporter V429_RS14845 PF00664 ABC transporter transmembrane region V429_RS14850 PF03772 Competence protein V429_RS14850 PF00753 Metallo-beta-lactamase superfamily V429_RS14880 PF00816 H-NS histone family V429_RS14885 PF09722 Protein of unknown function (DUF2384) V429_RS14910 PF00155 Aminotransferase class I and II V429_RS14910 PF00392 Bacterial regulatory proteins, gntR family V429_RS14970 PF05872 Bacterial protein of unknown function (DUF853) V429_RS14975 PF00155 Aminotransferase class I and II V429_RS14985 PF13609 Gram-negative porin V429_RS14990 PF13307 Helicase C-terminal domain V429_RS14990 PF06733 DEAD_2 V429_RS15000 PF00850 Histone deacetylase domain V429_RS15005 PF07690 Major Facilitator Superfamily V429_RS15010 PF01926 50S ribosome-binding GTPase V429_RS15015 PF00245 Alkaline phosphatase V429_RS15020 PF00245 Alkaline phosphatase V429_RS15040 PF01272 Transcription elongation factor, GreA/GreB, C-term V429_RS15040 PF14760 Rnk N-terminus V429_RS15045 PF00072 Response regulator receiver domain V429_RS15045 PF00196 Bacterial regulatory proteins, luxR family V429_RS15050 PF07730 Histidine kinase V429_RS15050 PF05231 MASE1 V429_RS15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS15055 PF07690 Major Facilitator Superfamily V429_RS15060 PF00990 Diguanylate cyclase, GGDEF domain V429_RS15065 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS15070 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS15075 PF00005 ABC transporter V429_RS15085 PF04116 Fatty acid hydroxylase superfamily V429_RS15090 PF13520 Amino acid permease V429_RS15095 PF02965 Vitamin B12 dependent methionine synthase, activation domain V429_RS15095 PF02574 Homocysteine S-methyltransferase V429_RS15095 PF02310 B12 binding domain V429_RS15095 PF02607 B12 binding domain V429_RS15095 PF00809 Pterin binding enzyme V429_RS15105 PF01595 Cyclin M transmembrane N-terminal domain V429_RS15105 PF03471 Transporter associated domain V429_RS15105 PF00571 CBS domain V429_RS15110 PF01895 PhoU domain V429_RS15115 PF00005 ABC transporter V429_RS15120 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS15130 PF14437 MafB19-like deaminase V429_RS15140 PF01274 Malate synthase V429_RS15145 PF00463 Isocitrate lyase family V429_RS15150 PF00308 Bacterial dnaA protein V429_RS15165 PF00586 AIR synthase related protein, N-terminal domain V429_RS15165 PF02769 AIR synthase related protein, C-terminal domain V429_RS15170 PF00551 Formyl transferase V429_RS15175 PF01784 NIF3 (NGG1p interacting factor 3) V429_RS15180 PF00072 Response regulator receiver domain V429_RS15180 PF02954 Bacterial regulatory protein, Fis family V429_RS15180 PF00158 Sigma-54 interaction domain V429_RS15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS15185 PF13188 PAS domain V429_RS15185 PF00512 His Kinase A (phospho-acceptor) domain V429_RS15190 PF06490 Flagellar regulatory protein FleQ V429_RS15190 PF02954 Bacterial regulatory protein, Fis family V429_RS15190 PF00158 Sigma-54 interaction domain V429_RS15200 PF01842 ACT domain V429_RS15205 PF13090 Polyphosphate kinase C-terminal domain 2 V429_RS15205 PF02503 Polyphosphate kinase middle domain V429_RS15205 PF17941 Polyphosphate kinase C-terminal domain 1 V429_RS15205 PF13089 Polyphosphate kinase N-terminal domain V429_RS15210 PF02541 Ppx/GppA phosphatase family V429_RS15215 PF03448 MgtE intracellular N domain V429_RS15215 PF00571 CBS domain V429_RS15215 PF01769 Divalent cation transporter V429_RS15220 PF00669 Bacterial flagellin N-terminal helical region V429_RS15225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V429_RS15225 PF00460 Flagella basal body rod protein V429_RS15230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase V429_RS15230 PF10135 Rod binding protein V429_RS15235 PF02119 Flagellar P-ring protein V429_RS15240 PF02107 Flagellar L-ring protein V429_RS15245 PF00460 Flagella basal body rod protein V429_RS15245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V429_RS15250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V429_RS15250 PF00460 Flagella basal body rod protein V429_RS15255 PF00460 Flagella basal body rod protein V429_RS15255 PF07559 Flagellar basal body protein FlaE V429_RS15255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V429_RS15265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V429_RS15265 PF00460 Flagella basal body rod protein V429_RS15270 PF00460 Flagella basal body rod protein V429_RS15275 PF03705 CheR methyltransferase, all-alpha domain V429_RS15275 PF01739 CheR methyltransferase, SAM binding domain V429_RS15280 PF01584 CheW-like domain V429_RS15280 PF00072 Response regulator receiver domain V429_RS15285 PF13144 Chaperone for flagella basal body P-ring formation V429_RS15300 PF12850 Calcineurin-like phosphoesterase superfamily domain V429_RS15305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS15315 PF00849 RNA pseudouridylate synthase V429_RS15315 PF01479 S4 domain V429_RS15320 PF11871 Domain of unknown function (DUF3391) V429_RS15320 PF01966 HD domain V429_RS15330 PF00923 Transaldolase/Fructose-6-phosphate aldolase V429_RS15335 PF04055 Radical SAM superfamily V429_RS15340 PF01228 Glycine radical V429_RS15340 PF02901 Pyruvate formate lyase-like V429_RS15345 PF00455 DeoR C terminal sensor domain V429_RS15345 PF08220 DeoR-like helix-turn-helix domain V429_RS15350 PF00892 EamA-like transporter family V429_RS15355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS15380 PF00313 'Cold-shock' DNA-binding domain V429_RS15385 PF02817 e3 binding domain V429_RS15385 PF00364 Biotin-requiring enzyme V429_RS15385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V429_RS15390 PF02779 Transketolase, pyrimidine binding domain V429_RS15390 PF02780 Transketolase, C-terminal domain V429_RS15395 PF00676 Dehydrogenase E1 component V429_RS15400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family V429_RS15410 PF05472 DNA replication terminus site-binding protein (Ter protein) V429_RS15415 PF00176 SNF2 family N-terminal domain V429_RS15415 PF00271 Helicase conserved C-terminal domain V429_RS15415 PF04434 SWIM zinc finger V429_RS15420 PF04337 Protein of unknown function, DUF480 V429_RS15430 PF06082 Exopolysaccharide biosynthesis protein YbjH V429_RS15450 PF02706 Chain length determinant protein V429_RS15460 PF00483 Nucleotidyl transferase V429_RS15465 PF04321 RmlD substrate binding domain V429_RS15470 PF00953 Glycosyl transferase family 4 V429_RS15480 PF01050 Mannose-6-phosphate isomerase V429_RS15480 PF00483 Nucleotidyl transferase V429_RS15485 PF01370 NAD dependent epimerase/dehydratase family V429_RS15490 PF16363 GDP-mannose 4,6 dehydratase V429_RS15500 PF01943 Polysaccharide biosynthesis protein V429_RS15505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V429_RS15515 PF16363 GDP-mannose 4,6 dehydratase V429_RS15520 PF00873 AcrB/AcrD/AcrF family V429_RS15525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS15525 PF00529 HlyD membrane-fusion protein of T1SS V429_RS15530 PF08361 MAATS-type transcriptional repressor, C-terminal region V429_RS15530 PF00440 Bacterial regulatory proteins, tetR family V429_RS15550 PF01479 S4 domain V429_RS15550 PF00849 RNA pseudouridylate synthase V429_RS15555 PF04079 Segregation and condensation complex subunit ScpB V429_RS15560 PF02616 Segregation and condensation protein ScpA V429_RS15565 PF01300 Telomere recombination V429_RS15570 PF02811 PHP domain V429_RS15575 PF00425 chorismate binding enzyme V429_RS15575 PF04715 Anthranilate synthase component I, N terminal region V429_RS15580 PF00591 Glycosyl transferase family, a/b domain V429_RS15580 PF00117 Glutamine amidotransferase class-I V429_RS15580 PF02885 Glycosyl transferase family, helical bundle domain V429_RS15585 PF00591 Glycosyl transferase family, a/b domain V429_RS15585 PF02885 Glycosyl transferase family, helical bundle domain V429_RS15590 PF00218 Indole-3-glycerol phosphate synthase V429_RS15590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase V429_RS15595 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS15600 PF00290 Tryptophan synthase alpha chain V429_RS15630 PF01773 Na+ dependent nucleoside transporter N-terminus V429_RS15630 PF07662 Na+ dependent nucleoside transporter C-terminus V429_RS15630 PF07670 Nucleoside recognition V429_RS15650 PF05930 Prophage CP4-57 regulatory protein (AlpA) V429_RS15665 PF00857 Isochorismatase family V429_RS15670 PF02629 CoA binding domain V429_RS15670 PF00549 CoA-ligase V429_RS15675 PF06545 Protein of unknown function (DUF1116) V429_RS15680 PF00696 Amino acid kinase family V429_RS15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS15695 PF03466 LysR substrate binding domain V429_RS15735 PF04002 RadC-like JAB domain V429_RS15775 PF02613 Nitrate reductase delta subunit V429_RS15780 PF01568 Molydopterin dinucleotide binding domain V429_RS15780 PF18364 Molybdopterin oxidoreductase N-terminal domain V429_RS15780 PF00384 Molybdopterin oxidoreductase V429_RS15785 PF03264 NapC/NirT cytochrome c family, N-terminal region V429_RS15790 PF00486 Transcriptional regulatory protein, C terminal V429_RS15790 PF00072 Response regulator receiver domain V429_RS15800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V429_RS15805 PF00512 His Kinase A (phospho-acceptor) domain V429_RS15805 PF00072 Response regulator receiver domain V429_RS15805 PF00672 HAMP domain V429_RS15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS15805 PF01627 Hpt domain V429_RS15810 PF07690 Major Facilitator Superfamily V429_RS15815 PF01040 UbiA prenyltransferase family V429_RS15820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV V429_RS15825 PF00510 Cytochrome c oxidase subunit III V429_RS15830 PF00115 Cytochrome C and Quinol oxidase polypeptide I V429_RS15835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain V429_RS15835 PF06481 COX Aromatic Rich Motif V429_RS15845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V429_RS15845 PF00034 Cytochrome c V429_RS15855 PF01156 Inosine-uridine preferring nucleoside hydrolase V429_RS15870 PF00127 Copper binding proteins, plastocyanin/azurin family V429_RS15875 PF02424 ApbE family V429_RS15880 PF07690 Major Facilitator Superfamily V429_RS15895 PF03372 Endonuclease/Exonuclease/phosphatase family V429_RS15900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS15905 PF00873 AcrB/AcrD/AcrF family V429_RS15915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS15915 PF00529 HlyD membrane-fusion protein of T1SS V429_RS15920 PF00873 AcrB/AcrD/AcrF family V429_RS15940 PF10437 Bacterial lipoate protein ligase C-terminus V429_RS15940 PF03099 Biotin/lipoate A/B protein ligase family V429_RS15945 PF00563 EAL domain V429_RS15945 PF00990 Diguanylate cyclase, GGDEF domain V429_RS15945 PF03707 Bacterial signalling protein N terminal repeat V429_RS15950 PF00873 AcrB/AcrD/AcrF family V429_RS15965 PF04143 Sulphur transport V429_RS15970 PF01022 Bacterial regulatory protein, arsR family V429_RS15985 PF02308 MgtC family V429_RS15990 PF13407 Periplasmic binding protein domain V429_RS15990 PF00356 Bacterial regulatory proteins, lacI family V429_RS15995 PF08244 Glycosyl hydrolases family 32 C terminal V429_RS15995 PF00251 Glycosyl hydrolases family 32 N-terminal domain V429_RS16000 PF02378 Phosphotransferase system, EIIC V429_RS16000 PF00367 phosphotransferase system, EIIB V429_RS16005 PF00294 pfkB family carbohydrate kinase V429_RS16010 PF11471 Maltoporin periplasmic N-terminal extension V429_RS16010 PF02264 LamB porin V429_RS16015 PF00226 DnaJ domain V429_RS16015 PF01556 DnaJ C terminal domain V429_RS16015 PF00684 DnaJ central domain V429_RS16020 PF00012 Hsp70 protein V429_RS16025 PF01025 GrpE V429_RS16030 PF01513 ATP-NAD kinase V429_RS16035 PF02463 RecF/RecN/SMC N terminal domain V429_RS16045 PF01368 DHH family V429_RS16045 PF02833 DHHA2 domain V429_RS16055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS16060 PF00005 ABC transporter V429_RS16060 PF02687 FtsX-like permease family V429_RS16060 PF12704 MacB-like periplasmic core domain V429_RS16065 PF02321 Outer membrane efflux protein V429_RS16070 PF04954 Siderophore-interacting protein V429_RS16070 PF08021 Siderophore-interacting FAD-binding domain V429_RS16080 PF00793 DAHP synthetase I family V429_RS16085 PF00816 H-NS histone family V429_RS16100 PF01266 FAD dependent oxidoreductase V429_RS16105 PF07883 Cupin domain V429_RS16105 PF01381 Helix-turn-helix V429_RS16110 PF00171 Aldehyde dehydrogenase family V429_RS16115 PF00202 Aminotransferase class-III V429_RS16120 PF00324 Amino acid permease V429_RS16130 PF13520 Amino acid permease V429_RS16140 PF02690 Na+/Pi-cotransporter V429_RS16145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V429_RS16145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V429_RS16150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase V429_RS16155 PF00512 His Kinase A (phospho-acceptor) domain V429_RS16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS16155 PF00072 Response regulator receiver domain V429_RS16155 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS16155 PF00989 PAS fold V429_RS16155 PF01627 Hpt domain V429_RS16170 PF01048 Phosphorylase superfamily V429_RS16180 PF12848 ABC transporter V429_RS16180 PF00005 ABC transporter V429_RS16195 PF13474 SnoaL-like domain V429_RS16200 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS16200 PF14821 Threonine synthase N terminus V429_RS16205 PF08544 GHMP kinases C terminal V429_RS16205 PF00288 GHMP kinases N terminal domain V429_RS16210 PF01842 ACT domain V429_RS16210 PF00742 Homoserine dehydrogenase V429_RS16210 PF03447 Homoserine dehydrogenase, NAD binding domain V429_RS16210 PF13840 ACT domain V429_RS16210 PF00696 Amino acid kinase family V429_RS16215 PF00588 SpoU rRNA Methylase family V429_RS16220 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) V429_RS16235 PF03737 Aldolase/RraA V429_RS16245 PF00486 Transcriptional regulatory protein, C terminal V429_RS16245 PF00072 Response regulator receiver domain V429_RS16260 PF00664 ABC transporter transmembrane region V429_RS16260 PF00005 ABC transporter V429_RS16265 PF00664 ABC transporter transmembrane region V429_RS16265 PF00005 ABC transporter V429_RS16285 PF18389 TrmO C-terminal domain V429_RS16285 PF01980 tRNA-methyltransferase O V429_RS16290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V429_RS16290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V429_RS16300 PF10431 C-terminal, D2-small domain, of ClpB protein V429_RS16300 PF02861 Clp amino terminal domain, pathogenicity island component V429_RS16300 PF17871 AAA lid domain V429_RS16300 PF07724 AAA domain (Cdc48 subfamily) V429_RS16300 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS16305 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS16310 PF00381 PTS HPr component phosphorylation site V429_RS16315 PF00391 PEP-utilising enzyme, mobile domain V429_RS16315 PF05524 PEP-utilising enzyme, N-terminal V429_RS16315 PF02896 PEP-utilising enzyme, TIM barrel domain V429_RS16320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V429_RS16325 PF00990 Diguanylate cyclase, GGDEF domain V429_RS16335 PF01292 Prokaryotic cytochrome b561 V429_RS16350 PF13476 AAA domain V429_RS16355 PF12320 Type 5 capsule protein repressor C-terminal domain V429_RS16355 PF00149 Calcineurin-like phosphoesterase V429_RS16365 PF04381 Putative exonuclease, RdgC V429_RS16375 PF02254 TrkA-N domain V429_RS16375 PF00999 Sodium/hydrogen exchanger family V429_RS16380 PF04151 Bacterial pre-peptidase C-terminal domain V429_RS16380 PF04389 Peptidase family M28 V429_RS16390 PF00224 Pyruvate kinase, barrel domain V429_RS16390 PF02887 Pyruvate kinase, alpha/beta domain V429_RS16395 PF12795 Mechanosensitive ion channel porin domain V429_RS16395 PF12794 Mechanosensitive ion channel inner membrane domain 1 V429_RS16395 PF00924 Mechanosensitive ion channel V429_RS16405 PF10282 Lactonase, 7-bladed beta-propeller V429_RS16410 PF00860 Permease family V429_RS16420 PF05433 Glycine zipper 2TM domain V429_RS16420 PF16998 17 kDa outer membrane surface antigen V429_RS16425 PF03949 Malic enzyme, NAD binding domain V429_RS16425 PF00390 Malic enzyme, N-terminal domain V429_RS16430 PF00072 Response regulator receiver domain V429_RS16440 PF13247 4Fe-4S dicluster domain V429_RS16445 PF01568 Molydopterin dinucleotide binding domain V429_RS16445 PF00384 Molybdopterin oxidoreductase V429_RS16445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V429_RS16445 PF00384 Molybdopterin oxidoreductase V429_RS16445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS16445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V429_RS16445 PF12838 4Fe-4S dicluster domain V429_RS16445 PF12838 4Fe-4S dicluster domain V429_RS16445 PF01568 Molydopterin dinucleotide binding domain V429_RS16445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS16480 PF02634 FdhD/NarQ family V429_RS16485 PF12727 PBP superfamily domain V429_RS16485 PF12728 Helix-turn-helix domain V429_RS16490 PF00989 PAS fold V429_RS16490 PF00512 His Kinase A (phospho-acceptor) domain V429_RS16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS16495 PF02954 Bacterial regulatory protein, Fis family V429_RS16495 PF00072 Response regulator receiver domain V429_RS16495 PF00158 Sigma-54 interaction domain V429_RS16500 PF12849 PBP superfamily domain V429_RS16505 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS16510 PF00005 ABC transporter V429_RS16515 PF12804 MobA-like NTP transferase domain V429_RS16520 PF03453 MoeA N-terminal region (domain I and II) V429_RS16520 PF03454 MoeA C-terminal region (domain IV) V429_RS16520 PF00994 Probable molybdopterin binding domain V429_RS16525 PF04632 Fusaric acid resistance protein family V429_RS16540 PF08447 PAS fold V429_RS16540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS16540 PF13426 PAS domain V429_RS16560 PF05114 Protein of unknown function (DUF692) V429_RS16570 PF10725 Protein of unknown function (DUF2517) V429_RS16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS16590 PF00512 His Kinase A (phospho-acceptor) domain V429_RS16590 PF09308 LuxQ, periplasmic V429_RS16590 PF00072 Response regulator receiver domain V429_RS16595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS16605 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS16610 PF00005 ABC transporter V429_RS16610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS16615 PF00005 ABC transporter V429_RS16615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS16625 PF01869 BadF/BadG/BcrA/BcrD ATPase family V429_RS16630 PF02838 Glycosyl hydrolase family 20, domain 2 V429_RS16630 PF00728 Glycosyl hydrolase family 20, catalytic domain V429_RS16650 PF08272 Topoisomerase I zinc-ribbon-like V429_RS16650 PF01131 DNA topoisomerase V429_RS16650 PF01751 Toprim domain V429_RS16650 PF01396 Topoisomerase DNA binding C4 zinc finger V429_RS16655 PF04996 Succinylarginine dihydrolase V429_RS16660 PF08496 Peptidase family S49 N-terminal V429_RS16660 PF01343 Peptidase family S49 V429_RS16665 PF00106 short chain dehydrogenase V429_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS16670 PF03466 LysR substrate binding domain V429_RS16675 PF07690 Major Facilitator Superfamily V429_RS16680 PF00155 Aminotransferase class I and II V429_RS16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS16690 PF03466 LysR substrate binding domain V429_RS16695 PF00709 Adenylosuccinate synthetase V429_RS16700 PF01161 Phosphatidylethanolamine-binding protein V429_RS16710 PF01204 Trehalase V429_RS16715 PF00579 tRNA synthetases class I (W and Y) V429_RS16720 PF01551 Peptidase family M23 V429_RS16720 PF01476 LysM domain V429_RS16720 PF08525 Opacity-associated protein A N-terminal motif V429_RS16725 PF03702 Anhydro-N-acetylmuramic acid kinase V429_RS16735 PF01965 DJ-1/PfpI family V429_RS16740 PF01042 Endoribonuclease L-PSP V429_RS16750 PF12792 CSS motif domain associated with EAL V429_RS16750 PF00563 EAL domain V429_RS16760 PF00456 Transketolase, thiamine diphosphate binding domain V429_RS16760 PF02780 Transketolase, C-terminal domain V429_RS16760 PF02779 Transketolase, pyrimidine binding domain V429_RS16765 PF00438 S-adenosylmethionine synthetase, N-terminal domain V429_RS16765 PF02773 S-adenosylmethionine synthetase, C-terminal domain V429_RS16765 PF02772 S-adenosylmethionine synthetase, central domain V429_RS16770 PF17283 SprT-like zinc ribbon domain V429_RS16770 PF10263 SprT-like family V429_RS16775 PF04231 Endonuclease I V429_RS16780 PF04452 RNA methyltransferase V429_RS16785 PF02951 Prokaryotic glutathione synthetase, N-terminal domain V429_RS16785 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain V429_RS16790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS16790 PF00672 HAMP domain V429_RS16790 PF12729 Four helix bundle sensory module for signal transduction V429_RS16795 PF02622 Uncharacterized ACR, COG1678 V429_RS16800 PF03652 Holliday junction resolvase V429_RS16805 PF00854 POT family V429_RS16810 PF00144 Beta-lactamase V429_RS16815 PF07726 ATPase family associated with various cellular activities (AAA) V429_RS16815 PF17863 AAA lid domain V429_RS16825 PF13559 Domain of unknown function (DUF4129) V429_RS16825 PF01841 Transglutaminase-like superfamily V429_RS16825 PF11992 Domain of unknown function (DUF3488) V429_RS16830 PF01235 Sodium:alanine symporter family V429_RS16835 PF00923 Transaldolase/Fructose-6-phosphate aldolase V429_RS16850 PF03167 Uracil DNA glycosylase superfamily V429_RS16855 PF01228 Glycine radical V429_RS16860 PF00375 Sodium:dicarboxylate symporter family V429_RS16865 PF00793 DAHP synthetase I family V429_RS16870 PF13369 Transglutaminase-like superfamily V429_RS16880 PF13847 Methyltransferase domain V429_RS16880 PF17827 PrmC N-terminal domain V429_RS16885 PF00472 RF-1 domain V429_RS16885 PF03462 PCRF domain V429_RS16890 PF01488 Shikimate / quinate 5-dehydrogenase V429_RS16890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain V429_RS16890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain V429_RS16895 PF03550 Outer membrane lipoprotein LolB V429_RS16910 PF14572 Phosphoribosyl synthetase-associated domain V429_RS16910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase V429_RS16915 PF02872 5'-nucleotidase, C-terminal domain V429_RS16915 PF00149 Calcineurin-like phosphoesterase V429_RS16920 PF01195 Peptidyl-tRNA hydrolase V429_RS16925 PF06071 Protein of unknown function (DUF933) V429_RS16925 PF01926 50S ribosome-binding GTPase V429_RS16970 PF03600 Citrate transporter V429_RS16970 PF02080 TrkA-C domain V429_RS16975 PF04973 Nicotinamide mononucleotide transporter V429_RS16980 PF01048 Phosphorylase superfamily V429_RS16990 PF04266 ASCH domain V429_RS17000 PF16657 Maltogenic Amylase, C-terminal domain V429_RS17000 PF00128 Alpha amylase, catalytic domain V429_RS17010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS17010 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg V429_RS17010 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase V429_RS17010 PF10371 Domain of unknown function V429_RS17010 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II V429_RS17015 PF07690 Major Facilitator Superfamily V429_RS17020 PF13419 Haloacid dehalogenase-like hydrolase V429_RS17030 PF00171 Aldehyde dehydrogenase family V429_RS17035 PF04958 Arginine N-succinyltransferase beta subunit V429_RS17040 PF00202 Aminotransferase class-III V429_RS17045 PF00117 Glutamine amidotransferase class-I V429_RS17055 PF00579 tRNA synthetases class I (W and Y) V429_RS17060 PF13419 Haloacid dehalogenase-like hydrolase V429_RS17065 PF00834 Ribulose-phosphate 3 epimerase family V429_RS17070 PF02086 D12 class N6 adenine-specific DNA methyltransferase V429_RS17080 PF01761 3-dehydroquinate synthase V429_RS17085 PF01202 Shikimate kinase V429_RS17090 PF03958 Bacterial type II/III secretion system short domain V429_RS17090 PF00263 Bacterial type II and III secretion system protein V429_RS17090 PF11741 AMIN domain V429_RS17090 PF07660 Secretin and TonB N terminus short domain V429_RS17100 PF04350 Pilus assembly protein, PilO V429_RS17110 PF11104 Type IV pilus assembly protein PilM; V429_RS17115 PF17092 Penicillin-binding protein OB-like domain V429_RS17115 PF00912 Transglycosylase V429_RS17115 PF00905 Penicillin binding protein transpeptidase domain V429_RS17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS17120 PF03466 LysR substrate binding domain V429_RS17125 PF02743 Cache domain V429_RS17125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS17125 PF00672 HAMP domain V429_RS17140 PF03466 LysR substrate binding domain V429_RS17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS17155 PF01476 LysM domain V429_RS17155 PF08525 Opacity-associated protein A N-terminal motif V429_RS17155 PF01551 Peptidase family M23 V429_RS17165 PF12794 Mechanosensitive ion channel inner membrane domain 1 V429_RS17165 PF00924 Mechanosensitive ion channel V429_RS17165 PF12795 Mechanosensitive ion channel porin domain V429_RS17170 PF03009 Glycerophosphoryl diester phosphodiesterase family V429_RS17175 PF00672 HAMP domain V429_RS17175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS17175 PF02743 Cache domain V429_RS17180 PF00890 FAD binding domain V429_RS17180 PF02910 Fumarate reductase flavoprotein C-term V429_RS17185 PF13183 4Fe-4S dicluster domain V429_RS17185 PF13085 2Fe-2S iron-sulfur cluster binding domain V429_RS17190 PF02300 Fumarate reductase subunit C V429_RS17195 PF02313 Fumarate reductase subunit D V429_RS17215 PF06224 Winged helix DNA-binding domain V429_RS17230 PF00501 AMP-binding enzyme V429_RS17250 PF00072 Response regulator receiver domain V429_RS17250 PF00486 Transcriptional regulatory protein, C terminal V429_RS17255 PF08521 Two-component sensor kinase N-terminal V429_RS17255 PF00512 His Kinase A (phospho-acceptor) domain V429_RS17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS17265 PF00478 IMP dehydrogenase / GMP reductase domain V429_RS17275 PF08207 Elongation factor P (EF-P) KOW-like domain V429_RS17275 PF01132 Elongation factor P (EF-P) OB domain V429_RS17275 PF09285 Elongation factor P, C-terminal V429_RS17280 PF09997 Predicted membrane protein (DUF2238) V429_RS17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V429_RS17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS17300 PF00990 Diguanylate cyclase, GGDEF domain V429_RS17310 PF13419 Haloacid dehalogenase-like hydrolase V429_RS17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS17320 PF03466 LysR substrate binding domain V429_RS17325 PF00990 Diguanylate cyclase, GGDEF domain V429_RS17325 PF05230 MASE2 domain V429_RS17330 PF00313 'Cold-shock' DNA-binding domain V429_RS17335 PF00857 Isochorismatase family V429_RS17340 PF01494 FAD binding domain V429_RS17345 PF00919 Uncharacterized protein family UPF0004 V429_RS17345 PF04055 Radical SAM superfamily V429_RS17345 PF01938 TRAM domain V429_RS17350 PF02562 PhoH-like protein V429_RS17355 PF02130 Uncharacterized protein family UPF0054 V429_RS17360 PF03471 Transporter associated domain V429_RS17360 PF00571 CBS domain V429_RS17365 PF00795 Carbon-nitrogen hydrolase V429_RS17370 PF07295 Zinc-ribbon containing domain V429_RS17375 PF00133 tRNA synthetases class I (I, L, M and V) V429_RS17375 PF08264 Anticodon-binding domain of tRNA V429_RS17375 PF13603 Leucyl-tRNA synthetase, Domain 2 V429_RS17390 PF01467 Cytidylyltransferase-like V429_RS17400 PF02590 Predicted SPOUT methyltransferase V429_RS17405 PF03717 Penicillin-binding Protein dimerisation domain V429_RS17405 PF00905 Penicillin binding protein transpeptidase domain V429_RS17410 PF01098 Cell cycle protein V429_RS17415 PF13406 Transglycosylase SLT domain V429_RS17420 PF03330 Lytic transglycolase V429_RS17420 PF05036 Sporulation related domain V429_RS17425 PF07943 Penicillin-binding protein 5, C-terminal domain V429_RS17425 PF00768 D-alanyl-D-alanine carboxypeptidase V429_RS17430 PF04359 Protein of unknown function (DUF493) V429_RS17435 PF03099 Biotin/lipoate A/B protein ligase family V429_RS17440 PF04055 Radical SAM superfamily V429_RS17440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family V429_RS17450 PF06821 Serine hydrolase V429_RS17455 PF02508 Rnf-Nqr subunit, membrane protein V429_RS17470 PF13411 MerR HTH family regulatory protein V429_RS17475 PF02272 DHHA1 domain V429_RS17475 PF01368 DHH family V429_RS17475 PF17768 RecJ OB domain V429_RS17480 PF13098 Thioredoxin-like domain V429_RS17480 PF10411 Disulfide bond isomerase protein N-terminus V429_RS17485 PF01741 Large-conductance mechanosensitive channel, MscL V429_RS17490 PF00589 Phage integrase family V429_RS17490 PF02899 Phage integrase, N-terminal SAM-like domain V429_RS17495 PF00258 Flavodoxin V429_RS17500 PF01523 Putative modulator of DNA gyrase V429_RS17505 PF01523 Putative modulator of DNA gyrase V429_RS17515 PF03734 L,D-transpeptidase catalytic domain V429_RS17515 PF17969 L,D-transpeptidase C-terminal domain V429_RS17520 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase V429_RS17545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS17545 PF00384 Molybdopterin oxidoreductase V429_RS17545 PF01568 Molydopterin dinucleotide binding domain V429_RS17550 PF03916 Polysulphide reductase, NrfD V429_RS17555 PF13247 4Fe-4S dicluster domain V429_RS17560 PF00989 PAS fold V429_RS17560 PF00512 His Kinase A (phospho-acceptor) domain V429_RS17560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS17565 PF00072 Response regulator receiver domain V429_RS17565 PF00196 Bacterial regulatory proteins, luxR family V429_RS17575 PF04397 LytTr DNA-binding domain V429_RS17575 PF00072 Response regulator receiver domain V429_RS17580 PF02554 Carbon starvation protein CstA V429_RS17580 PF13722 5TM C-terminal transporter carbon starvation CstA V429_RS17585 PF03575 Peptidase family S51 V429_RS17590 PF10415 Fumarase C C-terminus V429_RS17590 PF00206 Lyase V429_RS17600 PF02635 DsrE/DsrF-like family V429_RS17605 PF00563 EAL domain V429_RS17605 PF00990 Diguanylate cyclase, GGDEF domain V429_RS17605 PF03707 Bacterial signalling protein N terminal repeat V429_RS17615 PF00575 S1 RNA binding domain V429_RS17615 PF03725 3' exoribonuclease family, domain 2 V429_RS17615 PF00013 KH domain V429_RS17615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain V429_RS17615 PF01138 3' exoribonuclease family, domain 1 V429_RS17620 PF00312 Ribosomal protein S15 V429_RS17625 PF01509 TruB family pseudouridylate synthase (N terminal domain) V429_RS17625 PF16198 tRNA pseudouridylate synthase B C-terminal domain V429_RS17625 PF09157 Pseudouridine synthase II TruB, C-terminal V429_RS17630 PF02033 Ribosome-binding factor A V429_RS17635 PF00009 Elongation factor Tu GTP binding domain V429_RS17635 PF11987 Translation-initiation factor 2 V429_RS17635 PF08364 Bacterial translation initiation factor IF-2 associated region V429_RS17635 PF04760 Translation initiation factor IF-2, N-terminal region V429_RS17640 PF00575 S1 RNA binding domain V429_RS17640 PF13184 NusA-like KH domain V429_RS17640 PF08529 NusA N-terminal domain V429_RS17645 PF17384 RimP C-terminal SH3 domain V429_RS17645 PF02576 RimP N-terminal domain V429_RS17660 PF03840 Preprotein translocase SecG subunit V429_RS17665 PF00121 Triosephosphate isomerase V429_RS17670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V429_RS17670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V429_RS17670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V429_RS17670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V429_RS17675 PF00809 Pterin binding enzyme V429_RS17680 PF17862 AAA+ lid domain V429_RS17680 PF06480 FtsH Extracellular V429_RS17680 PF01434 Peptidase family M41 V429_RS17680 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS17685 PF01728 FtsJ-like methyltransferase V429_RS17690 PF01985 CRS1 / YhbY (CRM) domain V429_RS17700 PF03449 Transcription elongation factor, N-terminal V429_RS17700 PF01272 Transcription elongation factor, GreA/GreB, C-term V429_RS17705 PF13677 Membrane MotB of proton-channel complex MotA/MotB V429_RS17705 PF00691 OmpA family V429_RS17710 PF01618 MotA/TolQ/ExbB proton channel family V429_RS17715 PF02609 Exonuclease VII small subunit V429_RS17720 PF00348 Polyprenyl synthetase V429_RS17725 PF02779 Transketolase, pyrimidine binding domain V429_RS17725 PF02780 Transketolase, C-terminal domain V429_RS17725 PF13292 1-deoxy-D-xylulose-5-phosphate synthase V429_RS17730 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS17730 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS17735 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS17740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS17745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS17745 PF00005 ABC transporter V429_RS17750 PF04608 Phosphatidylglycerophosphatase A V429_RS17755 PF02769 AIR synthase related protein, C-terminal domain V429_RS17755 PF00586 AIR synthase related protein, N-terminal domain V429_RS17760 PF01029 NusB family V429_RS17765 PF00885 6,7-dimethyl-8-ribityllumazine synthase V429_RS17775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V429_RS17775 PF00925 GTP cyclohydrolase II V429_RS17780 PF00677 Lumazine binding domain V429_RS17785 PF01872 RibD C-terminal domain V429_RS17785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V429_RS17790 PF03477 ATP cone domain V429_RS17805 PF00464 Serine hydroxymethyltransferase V429_RS17820 PF02613 Nitrate reductase delta subunit V429_RS17840 PF00563 EAL domain V429_RS17840 PF13188 PAS domain V429_RS17840 PF03707 Bacterial signalling protein N terminal repeat V429_RS17840 PF00990 Diguanylate cyclase, GGDEF domain V429_RS17850 PF00501 AMP-binding enzyme V429_RS17850 PF16177 Acetyl-coenzyme A synthetase N-terminus V429_RS17850 PF13193 AMP-binding enzyme C-terminal domain V429_RS17855 PF01220 Dehydroquinase class II V429_RS17860 PF00364 Biotin-requiring enzyme V429_RS17865 PF02785 Biotin carboxylase C-terminal domain V429_RS17865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V429_RS17865 PF00289 Biotin carboxylase, N-terminal domain V429_RS17875 PF00474 Sodium:solute symporter family V429_RS17880 PF02378 Phosphotransferase system, EIIC V429_RS17880 PF00367 phosphotransferase system, EIIB V429_RS17880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V429_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS17885 PF03466 LysR substrate binding domain V429_RS17890 PF08240 Alcohol dehydrogenase GroES-like domain V429_RS17890 PF00107 Zinc-binding dehydrogenase V429_RS17900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS17900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V429_RS17900 PF01842 ACT domain V429_RS17905 PF12464 Maltose acetyltransferase V429_RS17905 PF14602 Hexapeptide repeat of succinyl-transferase V429_RS17910 PF00881 Nitroreductase family V429_RS17915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V429_RS17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS17920 PF01343 Peptidase family S49 V429_RS17935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V429_RS17935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_RS17940 PF07023 Protein of unknown function (DUF1315) V429_RS17945 PF00710 Asparaginase, N-terminal V429_RS17945 PF17763 Glutaminase/Asparaginase C-terminal domain V429_RS17950 PF03616 Sodium/glutamate symporter V429_RS17955 PF02743 Cache domain V429_RS17955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS17955 PF00672 HAMP domain V429_RS17960 PF00472 RF-1 domain V429_RS17960 PF03462 PCRF domain V429_RS17965 PF01336 OB-fold nucleic acid binding domain V429_RS17965 PF00152 tRNA synthetases class II (D, K and N) V429_RS17970 PF02567 Phenazine biosynthesis-like protein V429_RS17975 PF00667 FAD binding domain V429_RS17975 PF00175 Oxidoreductase NAD-binding domain V429_RS17975 PF00258 Flavodoxin V429_RS17980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V429_RS17980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V429_RS17985 PF01507 Phosphoadenosine phosphosulfate reductase family V429_RS17990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system V429_RS17995 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS18000 PF00571 CBS domain V429_RS18000 PF00005 ABC transporter V429_RS18005 PF00186 Dihydrofolate reductase V429_RS18010 PF12821 Threonine/Serine exporter, ThrE V429_RS18015 PF06738 Putative threonine/serine exporter V429_RS18025 PF00994 Probable molybdopterin binding domain V429_RS18035 PF02801 Beta-ketoacyl synthase, C-terminal domain V429_RS18035 PF00109 Beta-ketoacyl synthase, N-terminal domain V429_RS18050 PF02801 Beta-ketoacyl synthase, C-terminal domain V429_RS18050 PF00109 Beta-ketoacyl synthase, N-terminal domain V429_RS18075 PF00221 Aromatic amino acid lyase V429_RS18085 PF07977 FabA-like domain V429_RS18090 PF00501 AMP-binding enzyme V429_RS18090 PF13193 AMP-binding enzyme C-terminal domain V429_RS18100 PF00550 Phosphopantetheine attachment site V429_RS18105 PF00550 Phosphopantetheine attachment site V429_RS18140 PF00034 Cytochrome c V429_RS18140 PF03150 Di-haem cytochrome c peroxidase V429_RS18145 PF00194 Eukaryotic-type carbonic anhydrase V429_RS18150 PF04227 Indigoidine synthase A like protein V429_RS18155 PF00294 pfkB family carbohydrate kinase V429_RS18160 PF04324 BFD-like [2Fe-2S] binding domain V429_RS18160 PF18267 Rubredoxin NAD+ reductase C-terminal domain V429_RS18160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V429_RS18160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V429_RS18160 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS18160 PF13806 Rieske-like [2Fe-2S] domain V429_RS18165 PF18267 Rubredoxin NAD+ reductase C-terminal domain V429_RS18165 PF04324 BFD-like [2Fe-2S] binding domain V429_RS18165 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS18165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V429_RS18165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V429_RS18165 PF13806 Rieske-like [2Fe-2S] domain V429_RS18170 PF00005 ABC transporter V429_RS18175 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS18180 PF00005 ABC transporter V429_RS18190 PF14824 Sirohaem biosynthesis protein central V429_RS18190 PF10414 Sirohaem synthase dimerisation region V429_RS18190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V429_RS18195 PF04324 BFD-like [2Fe-2S] binding domain V429_RS18195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V429_RS18195 PF01568 Molydopterin dinucleotide binding domain V429_RS18195 PF00384 Molybdopterin oxidoreductase V429_RS18210 PF00582 Universal stress protein family V429_RS18220 PF00171 Aldehyde dehydrogenase family V429_RS18225 PF01472 PUA domain V429_RS18225 PF00696 Amino acid kinase family V429_RS18230 PF07417 Sigma factor-binding transcriptional regulator Crl V429_RS18235 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) V429_RS18240 PF00156 Phosphoribosyl transferase domain V429_RS18245 PF01546 Peptidase family M20/M25/M40 V429_RS18245 PF07687 Peptidase dimerisation domain V429_RS18250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS18250 PF00005 ABC transporter V429_RS18255 PF00005 ABC transporter V429_RS18255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V429_RS18265 PF12911 N-terminal TM domain of oligopeptide transport permease C V429_RS18265 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS18270 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS18275 PF00593 TonB dependent receptor V429_RS18275 PF07715 TonB-dependent Receptor Plug Domain V429_RS18285 PF01618 MotA/TolQ/ExbB proton channel family V429_RS18290 PF01618 MotA/TolQ/ExbB proton channel family V429_RS18295 PF02472 Biopolymer transport protein ExbD/TolR V429_RS18310 PF00704 Glycosyl hydrolases family 18 V429_RS18310 PF06483 Chitinase C V429_RS18340 PF00749 tRNA synthetases class I (E and Q), catalytic domain V429_RS18345 PF00749 tRNA synthetases class I (E and Q), catalytic domain V429_RS18350 PF00749 tRNA synthetases class I (E and Q), catalytic domain V429_RS18355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS18355 PF00672 HAMP domain V429_RS18365 PF00313 'Cold-shock' DNA-binding domain V429_RS18395 PF00929 Exonuclease V429_RS18400 PF03193 RsgA GTPase V429_RS18405 PF02666 Phosphatidylserine decarboxylase V429_RS18410 PF09905 DNA-binding protein VF530 V429_RS18430 PF03707 Bacterial signalling protein N terminal repeat V429_RS18430 PF00990 Diguanylate cyclase, GGDEF domain V429_RS18430 PF00563 EAL domain V429_RS18435 PF06877 Regulator of ribonuclease activity B V429_RS18440 PF05547 Immune inhibitor A peptidase M6 V429_RS18440 PF00801 PKD domain V429_RS18455 PF00561 alpha/beta hydrolase fold V429_RS18460 PF00005 ABC transporter V429_RS18460 PF00664 ABC transporter transmembrane region V429_RS18465 PF06004 Bacterial protein of unknown function (DUF903) V429_RS18470 PF05922 Peptidase inhibitor I9 V429_RS18470 PF00082 Subtilase family V429_RS18475 PF00581 Rhodanese-like domain V429_RS18480 PF04960 Glutaminase V429_RS18485 PF04320 Protein with unknown function (DUF469) V429_RS18490 PF02390 Putative methyltransferase V429_RS18495 PF04389 Peptidase family M28 V429_RS18495 PF01483 Proprotein convertase P-domain V429_RS18500 PF00155 Aminotransferase class I and II V429_RS18505 PF12792 CSS motif domain associated with EAL V429_RS18505 PF00563 EAL domain V429_RS18510 PF08338 Domain of unknown function (DUF1731) V429_RS18510 PF01370 NAD dependent epimerase/dehydratase family V429_RS18520 PF00005 ABC transporter V429_RS18525 PF13472 GDSL-like Lipase/Acylhydrolase family V429_RS18530 PF00072 Response regulator receiver domain V429_RS18530 PF01584 CheW-like domain V429_RS18540 PF06826 Predicted Permease Membrane Region V429_RS18540 PF02080 TrkA-C domain V429_RS18545 PF03006 Haemolysin-III related V429_RS18550 PF00282 Pyridoxal-dependent decarboxylase conserved domain V429_RS18555 PF04279 Intracellular septation protein A V429_RS18560 PF03795 YCII-related domain V429_RS18565 PF00459 Inositol monophosphatase family V429_RS18575 PF00483 Nucleotidyl transferase V429_RS18580 PF00854 POT family V429_RS18585 PF00072 Response regulator receiver domain V429_RS18615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS18620 PF02321 Outer membrane efflux protein V429_RS18625 PF01207 Dihydrouridine synthase (Dus) V429_RS18630 PF02954 Bacterial regulatory protein, Fis family V429_RS18635 PF01810 LysE type translocator V429_RS18660 PF01521 Iron-sulphur cluster biosynthesis V429_RS18670 PF00654 Voltage gated chloride channel V429_RS18675 PF00202 Aminotransferase class-III V429_RS18690 PF01569 PAP2 superfamily V429_RS18700 PF11849 Domain of unknown function (DUF3369) V429_RS18710 PF00893 Small Multidrug Resistance protein V429_RS18715 PF00893 Small Multidrug Resistance protein V429_RS18720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS18725 PF14814 Bifunctional transglycosylase second domain V429_RS18725 PF00905 Penicillin binding protein transpeptidase domain V429_RS18725 PF00912 Transglycosylase V429_RS18730 PF00271 Helicase conserved C-terminal domain V429_RS18730 PF00270 DEAD/DEAH box helicase V429_RS18730 PF08482 ATP-dependent helicase C-terminal V429_RS18730 PF04408 Helicase associated domain (HA2) V429_RS18740 PF03749 Sugar fermentation stimulation protein RE domain V429_RS18740 PF17746 SfsA N-terminal OB domain V429_RS18745 PF01258 Prokaryotic dksA/traR C4-type zinc finger V429_RS18750 PF00749 tRNA synthetases class I (E and Q), catalytic domain V429_RS18755 PF12626 Polymerase A arginine-rich C-terminus V429_RS18755 PF01743 Poly A polymerase head domain V429_RS18755 PF12627 Probable RNA and SrmB- binding site of polymerase A V429_RS18760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V429_RS18765 PF02548 Ketopantoate hydroxymethyltransferase V429_RS18770 PF02569 Pantoate-beta-alanine ligase V429_RS18790 PF01869 BadF/BadG/BcrA/BcrD ATPase family V429_RS18795 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component V429_RS18800 PF01061 ABC-2 type transporter V429_RS18805 PF00005 ABC transporter V429_RS18810 PF00156 Phosphoribosyl transferase domain V429_RS18815 PF00440 Bacterial regulatory proteins, tetR family V429_RS18820 PF02441 Flavoprotein V429_RS18825 PF08245 Mur ligase middle domain V429_RS18825 PF01225 Mur ligase family, catalytic domain V429_RS18825 PF02875 Mur ligase family, glutamate ligase domain V429_RS18830 PF00719 Inorganic pyrophosphatase V429_RS18845 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) V429_RS18860 PF00005 ABC transporter V429_RS18880 PF08447 PAS fold V429_RS18880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS18905 PF02080 TrkA-C domain V429_RS18905 PF03600 Citrate transporter V429_RS18910 PF00009 Elongation factor Tu GTP binding domain V429_RS18915 PF01507 Phosphoadenosine phosphosulfate reductase family V429_RS18920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V429_RS18920 PF14824 Sirohaem biosynthesis protein central V429_RS18920 PF10414 Sirohaem synthase dimerisation region V429_RS18925 PF01145 SPFH domain / Band 7 family V429_RS18925 PF16200 C-terminal region of band_7 V429_RS18930 PF01957 NfeD-like C-terminal, partner-binding V429_RS18935 PF01380 SIS domain V429_RS18935 PF00571 CBS domain V429_RS18940 PF00005 ABC transporter V429_RS18940 PF12848 ABC transporter V429_RS18950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ V429_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS18955 PF03466 LysR substrate binding domain V429_RS18960 PF02525 Flavodoxin-like fold V429_RS18985 PF00561 alpha/beta hydrolase fold V429_RS18990 PF00474 Sodium:solute symporter family V429_RS18995 PF03734 L,D-transpeptidase catalytic domain V429_RS18995 PF17969 L,D-transpeptidase C-terminal domain V429_RS19000 PF00924 Mechanosensitive ion channel V429_RS19005 PF00871 Acetokinase family V429_RS19010 PF04074 YhcH/YjgK/YiaL V429_RS19020 PF07731 Multicopper oxidase V429_RS19020 PF00394 Multicopper oxidase V429_RS19020 PF07732 Multicopper oxidase V429_RS19025 PF01177 Asp/Glu/Hydantoin racemase V429_RS19030 PF01810 LysE type translocator V429_RS19040 PF00155 Aminotransferase class I and II V429_RS19040 PF00392 Bacterial regulatory proteins, gntR family V429_RS19065 PF00209 Sodium:neurotransmitter symporter family V429_RS19075 PF00209 Sodium:neurotransmitter symporter family V429_RS19095 PF07690 Major Facilitator Superfamily V429_RS19105 PF01037 Lrp/AsnC ligand binding domain V429_RS19120 PF01047 MarR family V429_RS19125 PF02566 OsmC-like protein V429_RS19130 PF16884 N-terminal domain of oxidoreductase V429_RS19130 PF00107 Zinc-binding dehydrogenase V429_RS19135 PF00293 NUDIX domain V429_RS19145 PF01641 SelR domain V429_RS19150 PF00128 Alpha amylase, catalytic domain V429_RS19150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V429_RS19155 PF00128 Alpha amylase, catalytic domain V429_RS19155 PF02806 Alpha amylase, C-terminal all-beta domain V429_RS19155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V429_RS19160 PF02446 4-alpha-glucanotransferase V429_RS19165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_RS19165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V429_RS19170 PF01263 Aldose 1-epimerase V429_RS19175 PF02445 Quinolinate synthetase A protein V429_RS19180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS19180 PF00672 HAMP domain V429_RS19225 PF16331 TolA binding protein trimerisation V429_RS19225 PF13174 Tetratricopeptide repeat V429_RS19230 PF00691 OmpA family V429_RS19235 PF04052 TolB amino-terminal domain V429_RS19235 PF07676 WD40-like Beta Propeller Repeat V429_RS19245 PF02472 Biopolymer transport protein ExbD/TolR V429_RS19250 PF01618 MotA/TolQ/ExbB proton channel family V429_RS19255 PF03061 Thioesterase superfamily V429_RS19260 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) V429_RS19270 PF02322 Cytochrome bd terminal oxidase subunit II V429_RS19275 PF01654 Cytochrome bd terminal oxidase subunit I V429_RS19280 PF05496 Holliday junction DNA helicase RuvB P-loop domain V429_RS19280 PF17864 RuvB AAA lid domain V429_RS19280 PF05491 RuvB C-terminal winged helix domain V429_RS19285 PF07499 RuvA, C-terminal domain V429_RS19285 PF01330 RuvA N terminal domain V429_RS19290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS19290 PF00672 HAMP domain V429_RS19295 PF04073 Aminoacyl-tRNA editing domain V429_RS19295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V429_RS19295 PF03129 Anticodon binding domain V429_RS19300 PF00106 short chain dehydrogenase V429_RS19315 PF00378 Enoyl-CoA hydratase/isomerase V429_RS19320 PF10952 Protein of unknown function (DUF2753) V429_RS19325 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS19335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V429_RS19350 PF02594 Uncharacterised ACR, YggU family COG1872 V429_RS19355 PF02325 YGGT family V429_RS19360 PF03807 NADP oxidoreductase coenzyme F420-dependent V429_RS19360 PF14748 Pyrroline-5-carboxylate reductase dimerisation V429_RS19365 PF01168 Alanine racemase, N-terminal domain V429_RS19370 PF00437 Type II/IV secretion system protein V429_RS19375 PF00437 Type II/IV secretion system protein V429_RS19380 PF03883 Peroxide stress protein YaaA V429_RS19385 PF00270 DEAD/DEAH box helicase V429_RS19385 PF00271 Helicase conserved C-terminal domain V429_RS19390 PF05175 Methyltransferase small domain V429_RS19395 PF05525 Branched-chain amino acid transport protein V429_RS19400 PF05525 Branched-chain amino acid transport protein V429_RS19420 PF01207 Dihydrouridine synthase (Dus) V429_RS19430 PF00216 Bacterial DNA-binding protein V429_RS19435 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ V429_RS19440 PF07238 PilZ domain V429_RS19445 PF18073 Rubredoxin metal binding domain V429_RS19460 PF18429 Domain of unknown function (DUF5609) V429_RS19470 PF00990 Diguanylate cyclase, GGDEF domain V429_RS19470 PF08447 PAS fold V429_RS19470 PF08448 PAS fold V429_RS19470 PF13426 PAS domain V429_RS19470 PF05231 MASE1 V429_RS19470 PF00563 EAL domain V429_RS19475 PF01048 Phosphorylase superfamily V429_RS19480 PF01676 Metalloenzyme superfamily V429_RS19485 PF02885 Glycosyl transferase family, helical bundle domain V429_RS19485 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain V429_RS19485 PF00591 Glycosyl transferase family, a/b domain V429_RS19490 PF01791 DeoC/LacD family aldolase V429_RS19500 PF07662 Na+ dependent nucleoside transporter C-terminus V429_RS19500 PF01773 Na+ dependent nucleoside transporter N-terminus V429_RS19500 PF07670 Nucleoside recognition V429_RS19505 PF01026 TatD related DNase V429_RS19510 PF07963 Prokaryotic N-terminal methylation motif V429_RS19515 PF05958 tRNA (Uracil-5-)-methyltransferase V429_RS19515 PF01938 TRAM domain V429_RS19520 PF00909 Ammonium Transporter Family V429_RS19525 PF02899 Phage integrase, N-terminal SAM-like domain V429_RS19525 PF00589 Phage integrase family V429_RS19535 PF01381 Helix-turn-helix V429_RS19535 PF00717 Peptidase S24-like V429_RS19545 PF06892 Phage regulatory protein CII (CP76) V429_RS19750 PF03739 Lipopolysaccharide export system permease LptF/LptG V429_RS19755 PF03739 Lipopolysaccharide export system permease LptF/LptG V429_RS19760 PF00883 Cytosol aminopeptidase family, catalytic domain V429_RS19760 PF02789 Cytosol aminopeptidase family, N-terminal domain V429_RS19765 PF04364 DNA polymerase III chi subunit, HolC V429_RS19770 PF00133 tRNA synthetases class I (I, L, M and V) V429_RS19770 PF08264 Anticodon-binding domain of tRNA V429_RS19770 PF10458 Valyl tRNA synthetase tRNA binding arm V429_RS19775 PF01595 Cyclin M transmembrane N-terminal domain V429_RS19775 PF00571 CBS domain V429_RS19775 PF03471 Transporter associated domain V429_RS19780 PF09335 SNARE associated Golgi protein V429_RS19785 PF00768 D-alanyl-D-alanine carboxypeptidase V429_RS19820 PF02599 Global regulator protein family V429_RS19825 PF00696 Amino acid kinase family V429_RS19825 PF13840 ACT domain V429_RS19825 PF01842 ACT domain V429_RS19830 PF01411 tRNA synthetases class II (A) V429_RS19830 PF02272 DHHA1 domain V429_RS19830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V429_RS19835 PF02631 RecX family V429_RS19840 PF00154 recA bacterial DNA recombination protein V429_RS19845 PF02464 Competence-damaged protein V429_RS19860 PF05190 MutS family domain IV V429_RS19860 PF00488 MutS domain V V429_RS19860 PF05188 MutS domain II V429_RS19860 PF05192 MutS domain III V429_RS19860 PF01624 MutS domain I V429_RS19865 PF02028 BCCT, betaine/carnitine/choline family transporter V429_RS19880 PF04222 Protein of unknown function (DUF416) V429_RS19885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS19890 PF08525 Opacity-associated protein A N-terminal motif V429_RS19890 PF01476 LysM domain V429_RS19890 PF01551 Peptidase family M23 V429_RS19910 PF01297 Zinc-uptake complex component A periplasmic V429_RS19915 PF00005 ABC transporter V429_RS19920 PF00950 ABC 3 transport family V429_RS19930 PF00892 EamA-like transporter family V429_RS19935 PF03167 Uracil DNA glycosylase superfamily V429_RS19940 PF00892 EamA-like transporter family V429_RS19950 PF01541 GIY-YIG catalytic domain V429_RS19965 PF04012 PspA/IM30 family V429_RS19970 PF01553 Acyltransferase V429_RS19995 PF00578 AhpC/TSA family V429_RS20000 PF00684 DnaJ central domain V429_RS20000 PF01556 DnaJ C terminal domain V429_RS20000 PF00226 DnaJ domain V429_RS20035 PF03989 DNA gyrase C-terminal domain, beta-propeller V429_RS20035 PF00521 DNA gyrase/topoisomerase IV, subunit A V429_RS20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS20040 PF00204 DNA gyrase B V429_RS20040 PF01751 Toprim domain V429_RS20040 PF00986 DNA gyrase B subunit, carboxyl terminus V429_RS20045 PF04632 Fusaric acid resistance protein family V429_RS20050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V429_RS20050 PF00529 HlyD membrane-fusion protein of T1SS V429_RS20055 PF07869 Protein of unknown function (DUF1656) V429_RS20065 PF00293 NUDIX domain V429_RS20070 PF05728 Uncharacterised protein family (UPF0227) V429_RS20075 PF00149 Calcineurin-like phosphoesterase V429_RS20080 PF06853 Protein of unknown function (DUF1249) V429_RS20085 PF00293 NUDIX domain V429_RS20090 PF02321 Outer membrane efflux protein V429_RS20095 PF01467 Cytidylyltransferase-like V429_RS20095 PF00294 pfkB family carbohydrate kinase V429_RS20100 PF03279 Bacterial lipid A biosynthesis acyltransferase V429_RS20115 PF01865 Protein of unknown function DUF47 V429_RS20120 PF01384 Phosphate transporter family V429_RS20125 PF04073 Aminoacyl-tRNA editing domain V429_RS20145 PF00155 Aminotransferase class I and II V429_RS20145 PF00392 Bacterial regulatory proteins, gntR family V429_RS20150 PF03466 LysR substrate binding domain V429_RS20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS20155 PF03788 LrgA family V429_RS20160 PF04172 LrgB-like family V429_RS20175 PF01743 Poly A polymerase head domain V429_RS20175 PF01966 HD domain V429_RS20175 PF12627 Probable RNA and SrmB- binding site of polymerase A V429_RS20185 PF01471 Putative peptidoglycan binding domain V429_RS20185 PF13401 AAA domain V429_RS20190 PF16537 Type II secretion system protein B V429_RS20195 PF00633 Helix-hairpin-helix motif V429_RS20195 PF10576 Iron-sulfur binding domain of endonuclease III V429_RS20195 PF00730 HhH-GPD superfamily base excision DNA repair protein V429_RS20195 PF14815 NUDIX domain V429_RS20200 PF04362 Bacterial Fe(2+) trafficking V429_RS20205 PF01464 Transglycosylase SLT domain V429_RS20205 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain V429_RS20210 PF04076 Bacterial OB fold (BOF) protein V429_RS20215 PF00657 GDSL-like Lipase/Acylhydrolase V429_RS20225 PF00691 OmpA family V429_RS20225 PF01389 OmpA-like transmembrane domain V429_RS20230 PF03886 ABC-type transport auxiliary lipoprotein component V429_RS20235 PF02470 MlaD protein V429_RS20240 PF04403 Paraquat-inducible protein A V429_RS20245 PF17209 Hfq protein V429_RS20250 PF13419 Haloacid dehalogenase-like hydrolase V429_RS20260 PF00990 Diguanylate cyclase, GGDEF domain V429_RS20260 PF01590 GAF domain V429_RS20260 PF00360 Phytochrome region V429_RS20260 PF00563 EAL domain V429_RS20265 PF00701 Dihydrodipicolinate synthetase family V429_RS20270 PF08468 Methyltransferase small domain N-terminal V429_RS20270 PF05175 Methyltransferase small domain V429_RS20275 PF00483 Nucleotidyl transferase V429_RS20280 PF00534 Glycosyl transferases group 1 V429_RS20280 PF08323 Starch synthase catalytic domain V429_RS20320 PF03553 Na+/H+ antiporter family V429_RS20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS20325 PF03466 LysR substrate binding domain V429_RS20330 PF13416 Bacterial extracellular solute-binding protein V429_RS20335 PF00005 ABC transporter V429_RS20335 PF08402 TOBE domain V429_RS20340 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS20345 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS20350 PF00171 Aldehyde dehydrogenase family V429_RS20360 PF00892 EamA-like transporter family V429_RS20365 PF01037 Lrp/AsnC ligand binding domain V429_RS20370 PF12464 Maltose acetyltransferase V429_RS20370 PF14602 Hexapeptide repeat of succinyl-transferase V429_RS20375 PF11941 Domain of unknown function (DUF3459) V429_RS20375 PF00128 Alpha amylase, catalytic domain V429_RS20380 PF02378 Phosphotransferase system, EIIC V429_RS20380 PF00367 phosphotransferase system, EIIB V429_RS20385 PF00356 Bacterial regulatory proteins, lacI family V429_RS20400 PF00710 Asparaginase, N-terminal V429_RS20400 PF17763 Glutaminase/Asparaginase C-terminal domain V429_RS20415 PF02142 MGS-like domain V429_RS20425 PF00210 Ferritin-like domain V429_RS20440 PF17176 tRNA-binding domain V429_RS20440 PF05127 Helicase V429_RS20440 PF08351 Domain of unknown function (DUF1726) V429_RS20440 PF13718 GNAT acetyltransferase 2 V429_RS20445 PF00106 short chain dehydrogenase V429_RS20450 PF01584 CheW-like domain V429_RS20450 PF00072 Response regulator receiver domain V429_RS20455 PF07670 Nucleoside recognition V429_RS20495 PF02660 Glycerol-3-phosphate acyltransferase V429_RS20500 PF02152 Dihydroneopterin aldolase V429_RS20505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V429_RS20515 PF07690 Major Facilitator Superfamily V429_RS20520 PF07683 Cobalamin synthesis protein cobW C-terminal domain V429_RS20520 PF02492 CobW/HypB/UreG, nucleotide-binding domain V429_RS20530 PF01810 LysE type translocator V429_RS20535 PF03466 LysR substrate binding domain V429_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS20545 PF00330 Aconitase family (aconitate hydratase) V429_RS20545 PF06434 Aconitate hydratase 2 N-terminus V429_RS20545 PF11791 Aconitate B N-terminal domain V429_RS20550 PF01734 Patatin-like phospholipase V429_RS20555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS20555 PF12729 Four helix bundle sensory module for signal transduction V429_RS20555 PF00672 HAMP domain V429_RS20560 PF12729 Four helix bundle sensory module for signal transduction V429_RS20560 PF00672 HAMP domain V429_RS20560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS20570 PF05231 MASE1 V429_RS20570 PF00990 Diguanylate cyclase, GGDEF domain V429_RS20570 PF00563 EAL domain V429_RS20570 PF08448 PAS fold V429_RS20570 PF08447 PAS fold V429_RS20570 PF13426 PAS domain V429_RS20575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V429_RS20575 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS20580 PF02817 e3 binding domain V429_RS20580 PF00364 Biotin-requiring enzyme V429_RS20580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V429_RS20585 PF17831 Pyruvate dehydrogenase E1 component middle domain V429_RS20585 PF00456 Transketolase, thiamine diphosphate binding domain V429_RS20590 PF00392 Bacterial regulatory proteins, gntR family V429_RS20590 PF07729 FCD domain V429_RS20605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain V429_RS20605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain V429_RS20615 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V429_RS20615 PF00437 Type II/IV secretion system protein V429_RS20620 PF00482 Type II secretion system (T2SS), protein F V429_RS20625 PF01478 Type IV leader peptidase family V429_RS20625 PF06750 Bacterial Peptidase A24 N-terminal domain V429_RS20630 PF01121 Dephospho-CoA kinase V429_RS20635 PF07072 Cell division protein V429_RS20640 PF03884 DNA gyrase inhibitor YacG V429_RS20645 PF00293 NUDIX domain V429_RS20655 PF02810 SEC-C motif V429_RS20655 PF07517 SecA DEAD-like domain V429_RS20655 PF07516 SecA Wing and Scaffold domain V429_RS20655 PF01043 SecA preprotein cross-linking domain V429_RS20665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase V429_RS20670 PF00091 Tubulin/FtsZ family, GTPase domain V429_RS20670 PF12327 FtsZ family, C-terminal domain V429_RS20675 PF02491 SHS2 domain inserted in FTSA V429_RS20680 PF08478 POTRA domain, FtsQ-type V429_RS20680 PF03799 Cell division protein FtsQ V429_RS20685 PF01225 Mur ligase family, catalytic domain V429_RS20685 PF02875 Mur ligase family, glutamate ligase domain V429_RS20685 PF08245 Mur ligase middle domain V429_RS20690 PF04101 Glycosyltransferase family 28 C-terminal domain V429_RS20690 PF03033 Glycosyltransferase family 28 N-terminal domain V429_RS20695 PF01098 Cell cycle protein V429_RS20700 PF02875 Mur ligase family, glutamate ligase domain V429_RS20700 PF08245 Mur ligase middle domain V429_RS20705 PF00953 Glycosyl transferase family 4 V429_RS20705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 V429_RS20710 PF02875 Mur ligase family, glutamate ligase domain V429_RS20710 PF01225 Mur ligase family, catalytic domain V429_RS20710 PF08245 Mur ligase middle domain V429_RS20715 PF08245 Mur ligase middle domain V429_RS20715 PF02875 Mur ligase family, glutamate ligase domain V429_RS20715 PF01225 Mur ligase family, catalytic domain V429_RS20720 PF00905 Penicillin binding protein transpeptidase domain V429_RS20720 PF03717 Penicillin-binding Protein dimerisation domain V429_RS20725 PF04999 Cell division protein FtsL V429_RS20730 PF01795 MraW methylase family V429_RS20735 PF02381 MraZ protein, putative antitoxin-like V429_RS20740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V429_RS20745 PF04348 LppC putative lipoprotein V429_RS20750 PF02021 Uncharacterised protein family UPF0102 V429_RS20755 PF13580 SIS domain V429_RS20760 PF04972 BON domain V429_RS20765 PF04386 Stringent starvation protein B V429_RS20770 PF00043 Glutathione S-transferase, C-terminal domain V429_RS20770 PF02798 Glutathione S-transferase, N-terminal domain V429_RS20775 PF02167 Cytochrome C1 family V429_RS20780 PF00033 Cytochrome b/b6/petB V429_RS20780 PF00032 Cytochrome b(C-terminal)/b6/petD V429_RS20785 PF00355 Rieske [2Fe-2S] domain V429_RS20785 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal V429_RS20790 PF00380 Ribosomal protein S9/S16 V429_RS20795 PF00572 Ribosomal protein L13 V429_RS20800 PF03969 AFG1-like ATPase V429_RS20810 PF00595 PDZ domain V429_RS20810 PF13180 PDZ domain V429_RS20815 PF13180 PDZ domain V429_RS20845 PF01979 Amidohydrolase family V429_RS20850 PF03841 L-seryl-tRNA selenium transferase V429_RS20855 PF07071 KDGP aldolase V429_RS20860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS20860 PF08279 HTH domain V429_RS20860 PF00874 PRD domain V429_RS20860 PF05043 Mga helix-turn-helix domain V429_RS20865 PF00381 PTS HPr component phosphorylation site V429_RS20870 PF03668 P-loop ATPase protein family V429_RS20875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V429_RS20880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V429_RS20885 PF04963 Sigma-54 factor, core binding domain V429_RS20885 PF04552 Sigma-54, DNA binding domain V429_RS20885 PF00309 Sigma-54 factor, Activator interacting domain (AID) V429_RS20890 PF00005 ABC transporter V429_RS20890 PF12399 Branched-chain amino acid ATP-binding cassette transporter V429_RS20895 PF03968 OstA-like protein V429_RS20900 PF06835 Lipopolysaccharide-assembly, LptC-related V429_RS20910 PF01380 SIS domain V429_RS20910 PF00571 CBS domain V429_RS20915 PF00005 ABC transporter V429_RS20920 PF02405 Permease MlaE V429_RS20925 PF02470 MlaD protein V429_RS20930 PF05494 MlaC protein V429_RS20940 PF01722 BolA-like protein V429_RS20945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V429_RS20950 PF01523 Putative modulator of DNA gyrase V429_RS20955 PF04751 Protein of unknown function (DUF615) V429_RS20965 PF04363 Protein of unknown function (DUF496) V429_RS21000 PF07883 Cupin domain V429_RS21000 PF01381 Helix-turn-helix V429_RS21005 PF03594 Benzoate membrane transport protein V429_RS21015 PF02219 Methylenetetrahydrofolate reductase V429_RS21030 PF00672 HAMP domain V429_RS21030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS21035 PF03922 OmpW family V429_RS21045 PF17760 UvrA interaction domain V429_RS21045 PF17755 UvrA DNA-binding domain V429_RS21045 PF00005 ABC transporter V429_RS21050 PF00196 Bacterial regulatory proteins, luxR family V429_RS21055 PF00436 Single-strand binding protein family V429_RS21065 PF01545 Cation efflux family V429_RS21065 PF16916 Dimerisation domain of Zinc Transporter V429_RS21075 PF00313 'Cold-shock' DNA-binding domain V429_RS21080 PF07715 TonB-dependent Receptor Plug Domain V429_RS21080 PF00593 TonB dependent receptor V429_RS21085 PF00360 Phytochrome region V429_RS21085 PF01590 GAF domain V429_RS21085 PF00563 EAL domain V429_RS21085 PF00990 Diguanylate cyclase, GGDEF domain V429_RS21090 PF00672 HAMP domain V429_RS21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS21090 PF00512 His Kinase A (phospho-acceptor) domain V429_RS21095 PF00072 Response regulator receiver domain V429_RS21095 PF00486 Transcriptional regulatory protein, C terminal V429_RS21120 PF00990 Diguanylate cyclase, GGDEF domain V429_RS21130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V429_RS21140 PF13538 UvrD-like helicase C-terminal domain V429_RS21145 PF13361 UvrD-like helicase C-terminal domain V429_RS21145 PF12705 PD-(D/E)XK nuclease superfamily V429_RS21145 PF00580 UvrD/REP helicase N-terminal domain V429_RS21150 PF17946 RecC C-terminal domain V429_RS21155 PF07681 DoxX V429_RS21160 PF17954 Quercetinase C-terminal cupin domain V429_RS21160 PF02678 Pirin V429_RS21170 PF03466 LysR substrate binding domain V429_RS21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS21180 PF07702 UTRA domain V429_RS21180 PF00392 Bacterial regulatory proteins, gntR family V429_RS21195 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS21205 PF00005 ABC transporter V429_RS21205 PF08402 TOBE domain V429_RS21215 PF00990 Diguanylate cyclase, GGDEF domain V429_RS21235 PF00583 Acetyltransferase (GNAT) family V429_RS21240 PF06628 Catalase-related immune-responsive V429_RS21240 PF00199 Catalase V429_RS21265 PF00293 NUDIX domain V429_RS21270 PF01594 AI-2E family transporter V429_RS21275 PF00106 short chain dehydrogenase V429_RS21280 PF04371 Porphyromonas-type peptidyl-arginine deiminase V429_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS21285 PF03466 LysR substrate binding domain V429_RS21290 PF00158 Sigma-54 interaction domain V429_RS21290 PF00989 PAS fold V429_RS21290 PF02954 Bacterial regulatory protein, Fis family V429_RS21295 PF00465 Iron-containing alcohol dehydrogenase V429_RS21300 PF00391 PEP-utilising enzyme, mobile domain V429_RS21300 PF05524 PEP-utilising enzyme, N-terminal V429_RS21300 PF03610 PTS system fructose IIA component V429_RS21300 PF00381 PTS HPr component phosphorylation site V429_RS21305 PF02734 DAK2 domain V429_RS21310 PF02733 Dak1 domain V429_RS21315 PF00860 Permease family V429_RS21365 PF03764 Elongation factor G, domain IV V429_RS21365 PF00679 Elongation factor G C-terminus V429_RS21365 PF00009 Elongation factor Tu GTP binding domain V429_RS21365 PF03144 Elongation factor Tu domain 2 V429_RS21365 PF14492 Elongation Factor G, domain II V429_RS21370 PF00177 Ribosomal protein S7p/S5e V429_RS21380 PF04077 DsrH like protein V429_RS21385 PF02635 DsrE/DsrF-like family V429_RS21390 PF02635 DsrE/DsrF-like family V429_RS21395 PF01042 Endoribonuclease L-PSP V429_RS21400 PF08348 YheO-like PAS domain V429_RS21400 PF13309 HTH domain V429_RS21410 PF04983 RNA polymerase Rpb1, domain 3 V429_RS21410 PF05000 RNA polymerase Rpb1, domain 4 V429_RS21410 PF04998 RNA polymerase Rpb1, domain 5 V429_RS21410 PF04997 RNA polymerase Rpb1, domain 1 V429_RS21410 PF00623 RNA polymerase Rpb1, domain 2 V429_RS21415 PF04563 RNA polymerase beta subunit V429_RS21415 PF04560 RNA polymerase Rpb2, domain 7 V429_RS21415 PF00562 RNA polymerase Rpb2, domain 6 V429_RS21415 PF10385 RNA polymerase beta subunit external 1 domain V429_RS21415 PF04565 RNA polymerase Rpb2, domain 3 V429_RS21415 PF04561 RNA polymerase Rpb2, domain 2 V429_RS21420 PF16320 Ribosomal protein L7/L12 dimerisation domain V429_RS21420 PF00542 Ribosomal protein L7/L12 C-terminal domain V429_RS21425 PF00466 Ribosomal protein L10 V429_RS21430 PF00687 Ribosomal protein L1p/L10e family V429_RS21435 PF00298 Ribosomal protein L11, RNA binding domain V429_RS21435 PF03946 Ribosomal protein L11, N-terminal domain V429_RS21440 PF00467 KOW motif V429_RS21440 PF02357 Transcription termination factor nusG V429_RS21445 PF00584 SecE/Sec61-gamma subunits of protein translocation complex V429_RS21470 PF00485 Phosphoribulokinase / Uridine kinase family V429_RS21475 PF08279 HTH domain V429_RS21475 PF02237 Biotin protein ligase C terminal domain V429_RS21475 PF03099 Biotin/lipoate A/B protein ligase family V429_RS21480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain V429_RS21480 PF01565 FAD binding domain V429_RS21485 PF02080 TrkA-C domain V429_RS21485 PF02254 TrkA-N domain V429_RS21490 PF02386 Cation transport protein V429_RS21495 PF12833 Helix-turn-helix domain V429_RS21495 PF12852 Cupin V429_RS21510 PF01751 Toprim domain V429_RS21510 PF01131 DNA topoisomerase V429_RS21515 PF03264 NapC/NirT cytochrome c family, N-terminal region V429_RS21520 PF01568 Molydopterin dinucleotide binding domain V429_RS21520 PF00384 Molybdopterin oxidoreductase V429_RS21520 PF18364 Molybdopterin oxidoreductase N-terminal domain V429_RS21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS21535 PF00486 Transcriptional regulatory protein, C terminal V429_RS21535 PF00072 Response regulator receiver domain V429_RS21550 PF01794 Ferric reductase like transmembrane component V429_RS21555 PF00174 Oxidoreductase molybdopterin binding domain V429_RS21560 PF06496 Protein of unknown function (DUF1097) V429_RS21565 PF00072 Response regulator receiver domain V429_RS21565 PF00158 Sigma-54 interaction domain V429_RS21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS21575 PF00512 His Kinase A (phospho-acceptor) domain V429_RS21590 PF00571 CBS domain V429_RS21590 PF00478 IMP dehydrogenase / GMP reductase domain V429_RS21595 PF10063 Uncharacterized integral membrane protein (DUF2301) V429_RS21605 PF01037 Lrp/AsnC ligand binding domain V429_RS21610 PF03590 Aspartate-ammonia ligase V429_RS21620 PF07724 AAA domain (Cdc48 subfamily) V429_RS21620 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS21620 PF10431 C-terminal, D2-small domain, of ClpB protein V429_RS21620 PF17871 AAA lid domain V429_RS21620 PF02861 Clp amino terminal domain, pathogenicity island component V429_RS21625 PF02578 Multi-copper polyphenol oxidoreductase laccase V429_RS21630 PF01479 S4 domain V429_RS21630 PF00849 RNA pseudouridylate synthase V429_RS21635 PF13525 Outer membrane lipoprotein V429_RS21640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V429_RS21640 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS21645 PF00375 Sodium:dicarboxylate symporter family V429_RS21650 PF03313 Serine dehydratase alpha chain V429_RS21655 PF13309 HTH domain V429_RS21655 PF08348 YheO-like PAS domain V429_RS21665 PF02233 NAD(P) transhydrogenase beta subunit V429_RS21670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch V429_RS21670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V429_RS21670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V429_RS21675 PF00465 Iron-containing alcohol dehydrogenase V429_RS21680 PF06719 AraC-type transcriptional regulator N-terminus V429_RS21680 PF12833 Helix-turn-helix domain V429_RS21685 PF08212 Lipocalin-like domain V429_RS21690 PF00672 HAMP domain V429_RS21690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS21690 PF02743 Cache domain V429_RS21695 PF02666 Phosphatidylserine decarboxylase V429_RS21710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V429_RS21710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V429_RS21715 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain V429_RS21715 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain V429_RS21720 PF01316 Arginine repressor, DNA binding domain V429_RS21720 PF02863 Arginine repressor, C-terminal domain V429_RS21725 PF03606 C4-dicarboxylate anaerobic carrier V429_RS21730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V429_RS21730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V429_RS21735 PF00696 Amino acid kinase family V429_RS21755 PF02743 Cache domain V429_RS21755 PF00672 HAMP domain V429_RS21755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS21760 PF02653 Branched-chain amino acid transport system / permease component V429_RS21765 PF00005 ABC transporter V429_RS21770 PF13407 Periplasmic binding protein domain V429_RS21775 PF00703 Glycosyl hydrolases family 2 V429_RS21775 PF16353 Domain of unknown function(DUF4981) V429_RS21775 PF02929 Beta galactosidase small chain V429_RS21775 PF02836 Glycosyl hydrolases family 2, TIM barrel domain V429_RS21775 PF02837 Glycosyl hydrolases family 2, sugar binding domain V429_RS21780 PF00356 Bacterial regulatory proteins, lacI family V429_RS21785 PF16363 GDP-mannose 4,6 dehydratase V429_RS21790 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain V429_RS21790 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain V429_RS21795 PF08544 GHMP kinases C terminal V429_RS21795 PF00288 GHMP kinases N terminal domain V429_RS21795 PF10509 Galactokinase galactose-binding signature V429_RS21800 PF01263 Aldose 1-epimerase V429_RS21805 PF00248 Aldo/keto reductase family V429_RS21810 PF02673 Bacitracin resistance protein BacA V429_RS21815 PF12973 ChrR Cupin-like domain V429_RS21820 PF04545 Sigma-70, region 4 V429_RS21820 PF04542 Sigma-70 region 2 V429_RS21830 PF03485 Arginyl tRNA synthetase N terminal domain V429_RS21830 PF00750 tRNA synthetases class I (R) V429_RS21830 PF05746 DALR anticodon binding domain V429_RS21840 PF00227 Proteasome subunit V429_RS21845 PF00004 ATPase family associated with various cellular activities (AAA) V429_RS21845 PF10431 C-terminal, D2-small domain, of ClpB protein V429_RS21845 PF07724 AAA domain (Cdc48 subfamily) V429_RS21850 PF07690 Major Facilitator Superfamily V429_RS21855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V429_RS21855 PF03466 LysR substrate binding domain V429_RS21860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V429_RS21860 PF04324 BFD-like [2Fe-2S] binding domain V429_RS21860 PF18267 Rubredoxin NAD+ reductase C-terminal domain V429_RS21860 PF07992 Pyridine nucleotide-disulphide oxidoreductase V429_RS21860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V429_RS21865 PF13806 Rieske-like [2Fe-2S] domain V429_RS21870 PF01226 Formate/nitrite transporter V429_RS21875 PF10414 Sirohaem synthase dimerisation region V429_RS21875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V429_RS21875 PF14824 Sirohaem biosynthesis protein central V429_RS21880 PF01769 Divalent cation transporter V429_RS21880 PF00571 CBS domain V429_RS21880 PF03448 MgtE intracellular N domain V429_RS21885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V429_RS21885 PF00672 HAMP domain V429_RS21890 PF03737 Aldolase/RraA V429_RS21895 PF02592 Putative vitamin uptake transporter V429_RS21905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family V429_RS21910 PF00034 Cytochrome c V429_RS21915 PF00570 HRDC domain V429_RS21915 PF00271 Helicase conserved C-terminal domain V429_RS21915 PF09382 RQC domain V429_RS21915 PF00270 DEAD/DEAH box helicase V429_RS21915 PF16124 RecQ zinc-binding V429_RS21920 PF03061 Thioesterase superfamily V429_RS21935 PF03475 3-alpha domain V429_RS21935 PF03473 MOSC domain V429_RS21940 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS21945 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS21950 PF00005 ABC transporter V429_RS21950 PF08402 TOBE domain V429_RS21955 PF13416 Bacterial extracellular solute-binding protein V429_RS21960 PF13416 Bacterial extracellular solute-binding protein V429_RS21965 PF00202 Aminotransferase class-III V429_RS21970 PF00120 Glutamine synthetase, catalytic domain V429_RS21975 PF01258 Prokaryotic dksA/traR C4-type zinc finger V429_RS21990 PF05981 CreA protein V429_RS21995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V429_RS21995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V429_RS22000 PF00012 Hsp70 protein V429_RS22015 PF02903 Alpha amylase, N-terminal ig-like domain V429_RS22015 PF00128 Alpha amylase, catalytic domain V429_RS22030 PF05958 tRNA (Uracil-5-)-methyltransferase V429_RS22035 PF00486 Transcriptional regulatory protein, C terminal V429_RS22035 PF00072 Response regulator receiver domain V429_RS22040 PF00672 HAMP domain V429_RS22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS22040 PF00512 His Kinase A (phospho-acceptor) domain V429_RS22050 PF03949 Malic enzyme, NAD binding domain V429_RS22050 PF00390 Malic enzyme, N-terminal domain V429_RS22055 PF13460 NAD(P)H-binding V429_RS22055 PF11066 Protein of unknown function (DUF2867) V429_RS22060 PF01197 Ribosomal protein L31 V429_RS22065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain V429_RS22065 PF17764 3′ DNA-binding domain (3′BD) V429_RS22065 PF00271 Helicase conserved C-terminal domain V429_RS22065 PF00270 DEAD/DEAH box helicase V429_RS22065 PF18074 Primosomal protein N C-terminal domain V429_RS22075 PF00691 OmpA family V429_RS22075 PF01389 OmpA-like transmembrane domain V429_RS22080 PF00585 C-terminal regulatory domain of Threonine dehydratase V429_RS22080 PF00291 Pyridoxal-phosphate dependent enzyme V429_RS22085 PF00920 Dehydratase family V429_RS22090 PF01063 Amino-transferase class IV V429_RS22100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V429_RS22100 PF00205 Thiamine pyrophosphate enzyme, central domain V429_RS22100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V429_RS22105 PF13335 Magnesium chelatase, subunit ChlI C-terminal V429_RS22105 PF01078 Magnesium chelatase, subunit ChlI V429_RS22110 PF01553 Acyltransferase V429_RS22115 PF01553 Acyltransferase V429_RS22120 PF04463 Protein of unknown function (DUF523) V429_RS22130 PF00857 Isochorismatase family V429_RS22135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family V429_RS22135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain V429_RS22145 PF00005 ABC transporter V429_RS22150 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS22155 PF01323 DSBA-like thioredoxin domain V429_RS22160 PF01636 Phosphotransferase enzyme family V429_RS22165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase V429_RS22165 PF12801 4Fe-4S binding domain V429_RS22165 PF13746 4Fe-4S dicluster domain V429_RS22170 PF06288 Protein of unknown function (DUF1040) V429_RS22175 PF01590 GAF domain V429_RS22175 PF00360 Phytochrome region V429_RS22175 PF00563 EAL domain V429_RS22175 PF00990 Diguanylate cyclase, GGDEF domain V429_RS22180 PF09278 MerR, DNA binding V429_RS22180 PF00376 MerR family regulatory protein V429_RS22185 PF00403 Heavy-metal-associated domain V429_RS22190 PF00156 Phosphoribosyl transferase domain V429_RS22195 PF03725 3' exoribonuclease family, domain 2 V429_RS22195 PF01138 3' exoribonuclease family, domain 1 V429_RS22200 PF08340 Domain of unknown function (DUF1732) V429_RS22200 PF03755 YicC-like family, N-terminal region V429_RS22220 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) V429_RS22235 PF01370 NAD dependent epimerase/dehydratase family V429_RS22240 PF08360 QacR-like protein, C-terminal region V429_RS22240 PF00440 Bacterial regulatory proteins, tetR family V429_RS22245 PF00155 Aminotransferase class I and II V429_RS22250 PF08240 Alcohol dehydrogenase GroES-like domain V429_RS22250 PF00107 Zinc-binding dehydrogenase V429_RS22255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V429_RS22260 PF03707 Bacterial signalling protein N terminal repeat V429_RS22260 PF00990 Diguanylate cyclase, GGDEF domain V429_RS22260 PF00563 EAL domain V429_RS22265 PF00580 UvrD/REP helicase N-terminal domain V429_RS22265 PF13361 UvrD-like helicase C-terminal domain V429_RS22270 PF00266 Aminotransferase class-V V429_RS22275 PF02657 Fe-S metabolism associated domain V429_RS22280 PF00899 ThiF family V429_RS22315 PF03544 Gram-negative bacterial TonB protein C-terminal V429_RS22320 PF02472 Biopolymer transport protein ExbD/TolR V429_RS22325 PF01618 MotA/TolQ/ExbB proton channel family V429_RS22330 PF01618 MotA/TolQ/ExbB proton channel family V429_RS22340 PF03472 Autoinducer binding domain V429_RS22340 PF00196 Bacterial regulatory proteins, luxR family V429_RS22345 PF01380 SIS domain V429_RS22350 PF00455 DeoR C terminal sensor domain V429_RS22350 PF08220 DeoR-like helix-turn-helix domain V429_RS22355 PF00486 Transcriptional regulatory protein, C terminal V429_RS22355 PF00072 Response regulator receiver domain V429_RS22360 PF00512 His Kinase A (phospho-acceptor) domain V429_RS22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V429_RS22360 PF00672 HAMP domain V429_RS22365 PF00905 Penicillin binding protein transpeptidase domain V429_RS22370 PF06123 Inner membrane protein CreD V429_RS22375 PF00132 Bacterial transferase hexapeptide (six repeats) V429_RS22375 PF12804 MobA-like NTP transferase domain V429_RS22375 PF14602 Hexapeptide repeat of succinyl-transferase V429_RS22380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain V429_RS22380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain V429_RS22385 PF02874 ATP synthase alpha/beta family, beta-barrel domain V429_RS22385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V429_RS22390 PF00231 ATP synthase V429_RS22395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V429_RS22395 PF00306 ATP synthase alpha/beta chain, C terminal domain V429_RS22395 PF02874 ATP synthase alpha/beta family, beta-barrel domain V429_RS22400 PF00213 ATP synthase delta (OSCP) subunit V429_RS22405 PF00430 ATP synthase B/B' CF(0) V429_RS22410 PF00137 ATP synthase subunit C V429_RS22415 PF00119 ATP synthase A chain V429_RS22425 PF02195 ParB-like nuclease domain V429_RS22425 PF17762 HTH domain found in ParB protein V429_RS22430 PF13614 AAA domain V429_RS22435 PF02527 rRNA small subunit methyltransferase G V429_RS22440 PF01134 Glucose inhibited division protein A V429_RS22440 PF13932 GidA associated domain V429_RS22445 PF00258 Flavodoxin V429_RS22450 PF00593 TonB dependent receptor V429_RS22450 PF07715 TonB-dependent Receptor Plug Domain V429_RS22455 PF00005 ABC transporter V429_RS22460 PF00005 ABC transporter V429_RS22470 PF01032 FecCD transport family V429_RS22475 PF12631 MnmE helical domain V429_RS22475 PF10396 GTP-binding protein TrmE N-terminus V429_RS22475 PF01926 50S ribosome-binding GTPase V429_RS22480 PF02096 60Kd inner membrane protein V429_RS22480 PF14849 YidC periplasmic domain V429_RS22485 PF00825 Ribonuclease P V429_RS22490 PF00005 ABC transporter V429_RS22495 PF00528 Binding-protein-dependent transport system inner membrane component V429_RS22500 PF00497 Bacterial extracellular solute-binding proteins, family 3 V429_RS22535 PF00583 Acetyltransferase (GNAT) family V429_RS22545 PF00717 Peptidase S24-like V429_RS22545 PF01381 Helix-turn-helix V429_RS22550 PF00005 ABC transporter V429_RS22555 PF01242 6-pyruvoyl tetrahydropterin synthase V429_RS22590 PF01037 Lrp/AsnC ligand binding domain V429_RS22595 PF00701 Dihydrodipicolinate synthetase family