        recF NONE
        gyrB    6323 ..    6341 + -11.7  -6.22802   GCTCGATATAAAAAA             GCCGCTC CCTGT GAGCGGC             TTTTTTTTTCTGGCG 100 54
    AHA_0007 NONE
    AHA_0008    8757 ..    8786 + -16.5  -4.96848   CGGCGCGCGATAAAC       AAGAGAGGCCTGC ATGT GCAGGCCTCTCTG        TTTTTGTATCGCCGA 100 47
    AHA_0011   10581 ..   10605 +   -10  -2.87344   CCGAGAGTTGAGATA         GCGCAGCGGGG TCTG CCCCG-TGTGC          TGTCTGAAGAAGCTG  65 30
    AHA_0012   12611 ..   12630 + -11.4  -3.61715   CGATCAGCGTGGGTT            GCTGGGGG TTAT CTCCCAGC             TTCTTGCGCAGGCTG  73 86
    AHA_0024   29367 ..   29383 +  -2.9  -2.56914   TGAAGAACGAAAACA              GCTGTGG TGG CTGTAGC              TCAGTTGGTAGAGTC  40 70
    AHA_0025 NONE
    AHA_0026   29573 ..   29592 +  -6.4  -4.45168   TTGCTGTATGACGAG            GATGACCG TTCA TGGTCGTC             TTTGTGTTTTGAAAA  73 44
    AHA_0027   29717 ..   29732 + -11.8   -5.4387   CCACATTCTGAAAAA              CCCCGC TCAG GCGGGG               TTTTTTGCTTTCTGT 100 38
    AHA_0028   30650 ..   30695 +  -3.9  -3.28712   CATCATCTGGGTAGC GGTGATGA-CCGG-GCGGCCG AGCGCC CGGCAGCGCCGGATCAACCTC TTCTGCACGCCGGGC  48 276
    AHA_0031 NONE
    AHA_0032 NONE
    AHA_0033   38161 ..   38181 +  -7.5  -3.35679   ACCTGAGCCCGGCTG            CCGGTCGAG TCG TTCGAACGG            TTATCCGTACAGGAG  61 35
    AHA_0034   38527 ..   38559 + -14.1  -3.48276   CGCTGAATGGGGTTG      TGCGCCATGAGCCGC AGA GTTGCTCATGGCGCC      TTGTCTCAGGCGACG  95 35
        kdkA   47725 ..   47746 +  -6.5  -3.14132   CCGGTTTGATCTGGC           GCTGATGGC GGAT GCCATCGCC            TTGCTGGAGGCAGGA  54 149
    AHA_0044   48666 ..   48681 +  -3.2  -3.75024   ATTGACCAGCAGACC              CGCC GGGATCAG GGCG               TTGTTCATGATGGCC  54 156
    AHA_0046   50283 ..   50314 +    -3  -4.07568   CAGAACCCAGGATCA      GGGCCAGTGCCAC GCCGGTG GTGG-ACTGGATC      TTTTCGCCGAGGAAC  58 409
    AHA_0050   52218 ..   52261 +    -6  -3.30124   CGTCGGTCAGGGCGC GCGCCTGCTCGGTGC-CCTG CTGCAA CAGGCGCAGC-AGCTGGTGC TTGTCGGCGATGGCC  52 78
    AHA_0052   55614 ..   55638 +  -3.6  -3.95073   CCGAGCGGCCGGCTA         CCCCG-ATG-CT GAT GGTCATGCGGGG         TTTGTCGATCTGGCC  56 202
    AHA_0054   58014 ..   58035 +   -13  -3.92324   CAGCCAGTACAATGA           CGGCCCCT CTCAAC AGGGGCCG            TTTGCTATTGCGGCA  93 62
    AHA_0055   59456 ..   59474 + -17.4  -5.31456   CTCATCAACTTCAGA             CGCGGCCG CTT CGGCCGCG             TTTTTTATGGGTTGC 100 159
    AHA_0057   61901 ..   61913 +  -3.3  -3.73775   AACGCACCACGGCGC                CTGGC CTG GCCAC                TTTCATCAAGCTGGG  54 370
        evgA NONE
    AHA_0064   72558 ..   72574 +    -8  -3.19463   CGGAATGAAAATGAA              GGCATG ACGGG CATGCC              TTCCTGGATGGTCAA  62 33
    AHA_0066   74956 ..   74981 +  -7.5  -3.28712   AGGATGAGTATTTGA         TGCGGGAGGTG CTGG CCTCTCCTGCA          TTCTCGCAGGGGGCA  59 109
    AHA_0067   75718 ..   75728 +  -4.6   -2.9953   CAAGGCGTTCCGTCA                 GCTG ATG CGGC                 TCTGATTGTCATTCA  46 10
    AHA_0068   77064 ..   77084 + -12.5  -5.24129   AGCAAGCAATGAAAA            GACCCGGAC CTG GCCCGGGTC            TTTTTTATGCGCGGC 100 56
    AHA_0073   81248 ..   81285 +  -3.6  -2.71263   AAGACCTGCCAAAGT  TCGTATTTCG-GGCCG AGAGAAAC CGGCCACGAAGTA-GA   TGCTTACGCGAACTT  43 226
    AHA_0074   83186 ..   83206 + -16.1  -4.66938   GAAGATAAAAAGCGA            GGCCCCGCC ATT GGTGGGGCC            TTTTCTATTGGCGGT 100 64
        murI   84239 ..   84249 +  -2.4  -3.54029   CGAATCCTCTGCGCT                 TGCC GGT GGCC                 TTGTCCTTCATCAGA  49 205
        rrsA   86786 ..   86803 +  -9.9  -2.90508   AGTTAGAGCAAAGAC             CTGATGC GCAA GCATCAG              TGCTTATCTGGCTTA  65 88
    AHA_0078   87044 ..   87072 +  -8.3  -4.65747   TTGCTAACAAGAATG        CAGATATAAGCAT TAC GTGTTTATGTCTG        TTTTCTTCGGCCTTG  87 50
        rrlA NONE
        rrfA   90456 ..   90468 +  -9.1  -2.62667   AGAAGATTTAGATAG                CGCAC ACA GTGCG                GTCTTTACCGGTTAG  59 92
    AHA_0081   90575 ..   90592 + -12.7  -5.37043   CCATTAAATATCAAA             GCCTCCC AATC GGGAGGC              TTTTTTGTATCCGCT 100 38
        codA   92260 ..   92292 +  -8.5  -2.62396   TTGCCCTGCTGTCCC     CCGGGCCTGACATT TTGCAT AATGTC-GGCCCGA      TACTATGGAGACATG  56 60
        crcB NONE
    AHA_0084 NONE
    AHA_0085 NONE
        ubiB   95773 ..   95786 +  -9.5  -2.52623   CTCATTAAATAAACT               GCGCC AGCG GGCGC                CTGTTCTGGAGAGAA  63 33
        tatA   96046 ..   96060 +  -2.1  -3.15236   CAGAAAGATAAAGAT              CA-GGC CTAA GCCATG               TTCGATATCGGTTTC  42 17
        tatB NONE
        tatC   97239 ..   97266 +   -12  -4.25283   AAGCAGGAACAGACT        GAAGAGGGGAGC TAAG GCTCCCTTCCTC         TTTTCATGCCCCCGT  93 11
    AHA_0090   98137 ..   98147 +  -3.2  -2.79098   CGTTCTTCCAACTTC                 CTCT TCA GGAG                 TGATTCATGGCTACA  41 12
        hemB   99194 ..   99225 + -18.8   -3.5032   CTTGCCTGATGTCAC      CCACAATGCCGGCC CCTG GGCCGGCATTGTCG       TCTTTGGTATCCGGA 100 46
        prlC  101524 ..  101539 + -10.4  -4.39002   TTTTTGAGATAAAAA              GGGACC TTTT GGTCCC               TTTTCTCAAGGCTTT  93 111
    AHA_0093  104214 ..  104237 +  -4.4  -2.79796   TCTCCTTCGGCCGGT          GCCCCTACAG CGAC CTTCGGGGGC           TGTGATACACTCCGC  45 53
    AHA_0094  105054 ..  105077 + -18.2  -3.09648   AGGGATAAAAGAAGA          GGGCCAACCC GATG GGGTTGGCCC           TCTTGCCATCTATTG 100 52
         trx  109813 ..  109837 + -15.1  -4.02581   TGTAATAATCAAAGA          GGAGCGCATTG CAA TAATGCGCTCC          TTCTGTTTTATCACC 100 36
         rho  111296 ..  111313 + -10.5   -5.4433   TCGAAAATCATCAAA             CCGCGGC CCAG GTCGCGG              TTTTTGTTTATCTAT 100 46
    AHA_0100 NONE
    AHA_0101 NONE
         fre  114842 ..  114868 + -15.2  -3.86015   GGCAGGCCAGAAACA         ACAAACCCCAGC CTG GCTGGGGTTTGC         TTTATGGGCGACCTG 100 111
    AHA_0104  117877 ..  117905 + -13.9  -4.09685   AGCCAGTCGGCCAAT        AAAAACGCCGCCC TCG GGGTGGCGTTTTG        TTTTCCAGCATCGCA 100 40
    AHA_0108  120187 ..  120201 +  -5.7  -2.52464   GGGTGAGAGGGCTGC               TGCAG TCGTC CTGCA               TCAGTTCGGCGGCCC  45 300
    AHA_0114  127080 ..  127099 +   -15  -5.27335   CCATCAACAAGAAAA            CCCCCTCG CCAG CGAGGGGG             TTTTTGTTTGGCCCG 100 57
    AHA_0117  131049 ..  131068 +   -15  -5.33405   TGCTATGTATGCCAA            CCCCCTCG CCAG CGAGGGGG             TTTTTGTTTGATGGG 100 56
        norV NONE
        norW NONE
    AHA_0121 NONE
    AHA_0122  137189 ..  137201 +  -4.7  -2.87132   ATTGAGTAGTGAAGA                GCCAG TTG CAGGC                TGTCTGCGAAGGGCC  46 36
    AHA_0123  138729 ..  138746 + -14.1  -5.31275   GACTGCGACAAAAAA             CGGCGCC TGAT GGCGCCG              TTTTTTATGATGCAG 100 62
    AHA_0126  140643 ..  140669 +  -3.9  -4.20354   CCGTTTGCGCGAACG        TTAGATTACGCC AGAT GGC-TAATTTAA         TTTTCAGGTTGCCTT  60 156
    AHA_0129  145195 ..  145212 + -12.7   -4.2349   CAAGGTCAAAGAGAA             GGGAGGC TGAT GCCTCCC              TTTTGCATATCGGCA 100 49
    AHA_0131  148219 ..  148244 + -16.1  -4.71828   TCGCAGACATGAAAA         AGGCCCCGCCA GCGA TGGCGGGGCCC          TTTTATTGGTGCCGT 100 51
    AHA_0134  149456 ..  149488 + -20.8  -3.85698   CCAATACTTTCACAA      CGACAAAGGCGGAT ATCTC ATCCGCCTTTGTCG      TTTCTGGCCGCAGCA 100 43
        pepQ NONE
    AHA_0142 NONE
        trkH NONE
    AHA_0144  162952 ..  162969 +  -4.7  -5.10461   TCCTGAATGGCCTGA             GCGCTGC GGTT GCGGGGC              TTTTTGTTGGATAAA  80 51
        rrsB  164984 ..  165001 +  -7.7  -2.93252   AGTTAGAGCAAAGAC             CTGATGC GAAA GCGTCAG              TGCTTGTTCAACCCT  56 88
    AHA_0146  165216 ..  165243 + -14.4  -4.65747   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCAGCCTTG 100 50
        rrlB NONE
        rrfB  168563 ..  168582 +   -15  -5.60689   ACCCAATACAAGAAA            CCCCGCTC AGAT GAGCGGGG             TTTTTTATTATCTAA 100 32
    AHA_0152  172559 ..  172575 +  -9.4  -3.61398   AGAAGGCGCGGATCA              GCGGCT CTTCC AGCCGC              TTCTTGAGCACGGCG  68 64
        ilvC  175207 ..  175227 + -18.3  -4.27316   CCCGGCCACAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 127
    AHA_0155  177539 ..  177558 + -10.7    -5.252   ATGCTGAAAACAAAG            TCCGGCC CAGGGT GGCCGGA             TTTTTTATGCCCGTC 100 56
        radC  181910 ..  181945 +  -6.2  -3.72893   TAAAATGCCGCCTTC    TGTTTGCCCCGC AATCGAAGGCCA GCGGGGCAGATA     TTTGCTCGAGCAATG  60 88
        rpmB NONE
        rpmG  182425 ..  182441 + -10.8  -5.60993   CTGCATTCCCAAAAA              CCCGGC CTAGT GCCGGG              TTTTTTTATGGCCGA 100 51
    AHA_0163 NONE
        mutM  183802 ..  183821 +  -5.7  -3.30007   CTGAATCGCGGTTTT            TTTGGCC TGAAAT GGCCAAG             TTGTAAGAGAGTATT  54 37
    AHA_0165  184874 ..  184895 + -14.5  -4.11412   GGCCCCTGCAGCAAA           CAGGCTACC CTCG GGTAGCCTG            TTTCGTTGTTACTTG 100 49
    AHA_0167  186674 ..  186698 + -20.1  -2.62184   GATGATGTAAATGCA          GACAGGGCCCT TGA AGGGCCCTGTC          TCGTATGAGGGGAAG 100 46
        rfaF  188859 ..  188882 +  -2.5  -2.62616   GGGCAAGCGCGGGGA         GCCGCACTAGC ATGG GCTA-T-CGGC          TGCTCTACAACCTGC  38 16
        waaA  190161 ..  190179 +   -16  -5.74122   ACGGATATAAAAAAA             CGGAGCGC ATG GCGCTCCG             TTTTTTTATGTCGTG 100 51
    AHA_0174 NONE
    AHA_0175 NONE
    AHA_0176  194786 ..  194808 + -20.6  -5.40474   CGCGTATTGAATACA           CAGGCGGGCC TCG GGCCCGCCTG           TTTTTTTGGGCGGCT 100 46
    AHA_0177  195239 ..  195258 +    -2  -4.27843   CTGGACCGATCAATA            G-CCGGGCC GGC GGCTCAGAC            TTCTTTCTCTTTCAA  60 25
    AHA_0180 NONE
        ubiA  197514 ..  197555 + -19.1  -3.48395   TCTGTGAGTCAGCCC CATCATGAAAAAAGGCCGCA TGT TGCGGCCTTTTTT-ATGGTG TTGTGTGAGCGGGGT 100 34
        lexA  200831 ..  200860 + -18.7  -4.11838   ATGTAATCCCTGCCA       TGAAACGGCCTCC TGCG GGAGGCCGTTTCG        TTTCTGTACTCCTTT 100 35
    AHA_0184  201567 ..  201590 + -18.2  -4.17316   TCACTGCTTCTTGTG          CAGCCCCACC TTAT GGTGGGGCTG           TTGTTTTGGGCGGGT 100 44
    AHA_0186 NONE
    AHA_0187  203848 ..  203873 +  -7.5  -3.72893   TCATTCCTGCAGCGA         GCCGGCG-TAGC CCA GCTGGCGCCAGC         TTTCGTAGACGAATA  65 69
        fieF NONE
        cysE  208185 ..  208200 +  -2.6  -2.79796   GACAAGCCTTCGCTG              GACA-TG GAT CAGTGTC              TCTGATCCCCTGACC  39 5
    AHA_0193 NONE
    AHA_0194  209979 ..  210001 + -20.6  -4.46112   CGCGAGAATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTGGGTACGG 100 53
        polA  213860 ..  213891 + -13.8  -3.96148   ATGTAGCTATATAAG      AAGAGAAGCCCGGCA TGA TGCCGGGCTTC-CTG      TTTGTGGTGGCGGGG 100 56
        rrsC  216491 ..  216501 +  -5.4  -3.53811   GTTCACACAGATTGC                 CTTG ATT CAAG                 TTTAGAGACAGTACA  55 60
    AHA_0199 NONE
    AHA_0200  216891 ..  216909 +  -8.8  -3.70081   GTACGACAACAAGCT             GCGTCGGT TTC ACCGACAC             TTCTTGGGGTTGTAT  70 231
        rrlC NONE
   AHA_0201a  220121 ..  220133 +  -9.1  -2.62667   AGAAGATTTAGATAG                CGCAC ACA GTGCG                GTCTTTACCGGTTAG  59 93
    AHA_0202 NONE
        rrfC  220380 ..  220399 +   -15  -4.74504   CACCTATTTAGAAGA            GGCCTCCC ATTC GGGAGGCC             TTTTTGCATTGGAAT 100 37
    AHA_0204  221467 ..  221482 +  -3.9  -3.13772   GAGTAAGTTGACCCT              GCGTG GTACTA CGCGC               TGATTTTAGTAAAAT  45 7
        ebgA NONE
    AHA_0206  225368 ..  225401 +  -2.4  -3.54543   TGATAAAAGCCGGAA     GGGCGGGGC-TCA CCCTACAAA TCATGCCCCGCTC     TTTCGCGAGATAACT  47 60
    AHA_0207  226868 ..  226889 +  -4.3  -3.06183   CGGCGCAGGTCGCCA           TGCAGACGC CATA GCCACTGCA            TTGACTCCCAATCAA  47 12
    AHA_0208 NONE
    AHA_0209  229015 ..  229043 + -20.5  -3.51778   GCTGGGGATTCGTTT        CAACAGGAGCTGT GCC ACAGCTCCTGTTG        TGTTTCCTGTCGTCC 100 141
    AHA_0210  230100 ..  230122 + -19.2  -4.10953   GGTCCGGATAAAAAA           GAGGGAGGCC ATG GGCCTCCCTC           TTTCGTTTGCTGCCT 100 43
    AHA_0212  233406 ..  233424 +   -16   -3.6502   CCGAGCAGAAAAAAA             CAGGCCCG TTA CGGGCCTG             TTTCGATCAGAGGTG 100 54
    AHA_0215  236487 ..  236504 + -14.1  -4.18018   TCGCTCAATAAAAAA             GGCCCGC ATGT GCGGGCC              TTTTGCATGGCAAGG 100 43
        uvrD  243981 ..  244003 +  -7.7  -3.84825   ATCATATCGCATCAA           GCCAGGG TCAATTTTC CCCTGGC           TTTGATATGAATACA  68 48
    AHA_0224  248209 ..  248219 +  -6.8  -3.28924   AGCGACAGATCTCCA                 GCAG GTC CTGC                 TTATCGCGGAAGATC  55 300
    AHA_0227  250695 ..  250717 + -17.8  -3.10091   TGCCCAGCATAAAAA           GAGCCTGCCA CTG TGGCAGGCTC           TGTCGTTTTCGGGGT 100 63
    AHA_0231  253592 ..  253638 +  -5.7  -3.37796   AGCAGGTTGACCGGG CGCGG-GGCGGGCAGGGCATCC GCCA GGATCTCCTGCAGGGTGCCGCG TTCTAGCTCCTCGCG  52 129
    AHA_0234 NONE
    AHA_0235  256467 ..  256489 + -19.2  -3.82378   GTGCTTGCCAATAAA           CAACGGGGGC TTG GCCCCCGTTG           TTGTTATCGATGGCT 100 68
        mgtA  263419 ..  263442 + -16.8  -5.28176   AATAATGAACGTAAA          GAGGGATGGC CTGG GCCATCCCTC           TTTTTTATGGCTGGC 100 77
    AHA_0245  270204 ..  270221 +  -2.6  -2.74784   ACCCTGCTGCAGGAC             GCCCTG CAGGCC CAGGAC              TGACTTTTAACCGGT  39 5
      mmsA-1  271853 ..  271869 +  -5.1  -3.34522   GCCCGGACATGGCCC              GGTGG CAGGAAT CCACC              TTCGTTCGCCGCTAT  53 59
    AHA_0247 NONE
         ald  273836 ..  273850 + -12.8  -4.03078   CCGCGATTTCAGGGA               GGGCCG CCA CGGCCC               TTTCTCATATACTGG  93 90
    AHA_0249  274948 ..  274971 +  -5.8  -2.52156   TAAGATGCGGACCTT          GCGCGGGCGC AAGC GCTTCCCCGC           CTCTTAGCTTTAGGT  48 243
    AHA_0250  275502 ..  275517 + -11.8   -4.0162   GGCAAGCATGACAAA              GGGGCC CACG GGCCCC               TTTGTCATGTCCGGG  90 45
    AHA_0252 NONE
    AHA_0253  277773 ..  277797 + -20.1  -2.77685   TCGCTCAAGCAACAA          GAAGGGCAGCC ACT GGCTGCCCTTC          TGCATTTCTTCGTCT 100 54
    AHA_0259 NONE
        dprA NONE
    AHA_0261  286536 ..  286550 +  -2.8  -3.53012   GCCGCGCTGGTAGAA               TTCAGG TCA TCTGGA               TTTCAAGGCGCGGCC  49 50
    AHA_0262 NONE
      purE-2  287810 ..  287830 + -11.1  -5.24531   GTTAATCAATGATGA            GGCGACAGC CCG GCTGTCGCA            TTTTTTATGCCCAAT 100 133
    AHA_0264 NONE
        hemF  289406 ..  289422 + -13.7  -3.94877   GTGGTTGTGACCAGA              GGGGCCA TGA TGGCCCC              TTCTTATTGGCCGAT 100 31
        aroE NONE
    AHA_0267  290678 ..  290699 + -10.9  -5.77988   AGTCACCTTTATAAC           TCCCCGGTA TTCG TACTGGGGA            TTTTTTTATCTATAT 100 121
    AHA_0269  292817 ..  292837 + -16.9  -4.88293   TCTCATTGATATTGA            CGAGGAGCC GCC GGCTCCTCG            TTTCTTTTTGGCCTT 100 59
    AHA_0270 NONE
    AHA_0271 NONE
        hemN  296073 ..  296086 +  -9.5  -5.80364   TGGAAAATAAAAAAA               CCGCC GAGA GGCGG                TTTTTTTATTGGGCT 100 56
        typA  304089 ..  304104 + -10.4  -5.64274   ATCGACAGACAGAGA              GAGGCC TTCG GGCCTC               TTTTTTTATGCCTGA 100 50
         rbn  305133 ..  305172 + -19.5  -4.07568   CCTTGCTGTTAGCAT C-G-ACGACCGCCCCCATC AGCA GATGGGGGCGGTCGTTCCG  TTTTGAGAGGAGAGG 100 48
         dtd  305974 ..  305988 +  -2.8  -3.15544   AAAGAACAGCTGATA               GAGG GTGATCA CCTC               TTCATCGAGGTCGAC  44 371
    AHA_0282  307398 ..  307428 + -19.9  -4.09108   GCTGGTTCCCATCAA       GCAACAAGGCCTC ATCAC GAGGCCTTGTTGC       TTTCTGTCGGTTAGC 100 47
      aroK-1 NONE
         edd NONE
         eda  317982 ..  318012 + -16.3  -3.59023   CTTCCGTTTGCCAAG      CA-AGCAGGCCACC CTCG GGTGGCCTGCTCTG       TTCTGGTTGTATGGC 100 64
    AHA_0291  319857 ..  319873 + -12.3  -4.42386   GCGGCGATCAAAAAA              GCCTGCA TGA TGCAGGC              TTTTCTGGATGGCAG  95 93
    AHA_0294 NONE
        secB NONE
        gpsA  325061 ..  325092 + -18.8  -3.57387   GCTCGCCGCAGAATG      CAAAAGGCCCCGCC AGCT GGCGGGGCCTTTTC       TTTGCCGCATGTCTT 100 44
        bioH NONE
    AHA_0300 NONE
    AHA_0301  328406 ..  328420 +  -4.2  -3.58329   CCAGCAGAACCTGAA               CCTGAG TGT CTGAGG               TTTCCACCGTCTTTC  52 13
    AHA_0302  328816 ..  328829 +  -9.5  -4.74103   AACAGCGACAAAAAA               GCCCC GCGA GGGGC                TTTTTGCATTCCGGG  95 49
    AHA_0305 NONE
        envZ  334166 ..  334187 + -14.5   -3.7108   GATTGATTGAACGAA           GGGCGTATC CGTG GATACGCCC            TTTGCATGTCAGGCT  95 31
        rpsJ  335759 ..  335774 +  -2.5  -3.33696   CAGCTGGTGTAGACG              TCCAG ATCAGC CTGGG               TTAATTACGGAAAGA  45 6
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  340448 ..  340474 + -18.1  -5.05782   CGGTACTTTGTAGTC         CAAACGGCCCC TTAGC GGGGCCGTTTG         TTTTTTAGGCTACCT 100 42
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN  342123 ..  342135 +  -4.8  -3.72027   AGGGCGAAATTCCGG                GCCT GAAGA AGGC                TTCTTGGTAACGAAT  55 3
        rpsH NONE
        rplF NONE
        rplR  343453 ..  343463 +  -3.2  -3.32963   CTGCTGCACGTGACG                 CTGG TCT TCAG                 TTCTAAGCTAGGAGT  47 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  346109 ..  346153 + -17.6  -3.18366   TACGGTTAGTACTTG CAACAAATAGTTGTGCTGGCTA ATA TAGCCAGC-CAACT-TTTGTTG TGTATTGGTTGACCG 100 187
        rpsM NONE
        rpsK  346973 ..  347000 +  -2.6  -3.28261   TTGTCGTCCTCCCAA        GAAGC-GCCGCGT GTA ACGCTGTAGCTAC        TTGGTCTAGGATTGT  43 10
        rpsD  347633 ..  347651 + -10.4  -2.59431   ACAGCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TAGCTTCTAAAGAGA  66 10
        rpoA NONE
        rplQ  349101 ..  349117 + -10.8  -5.13722   AGTGATAAAGAAAAA              GCCGGG CTTGT CCCGGC              TTTTCTTTTAATGGA 100 36
        rrsD  351558 ..  351575 +  -7.7  -2.93252   AGTTAGAGCAAAGAC             CTGATGC GAAA GCGTCAG              TGCTTGTTCAACCCT  56 88
    AHA_0336  351790 ..  351817 + -14.4  -4.65747   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCAGCCTTG 100 50
        rrlD NONE
        rrfD  355100 ..  355112 +  -3.4  -2.70932   CCAATTAAACAGTTA                TGCA CAAAT TGCA                TAATTGGCCGAGAGG  41 40
    AHA_0339  355268 ..  355287 + -13.6  -5.72207   GCCACTACTTAAGAA            GCCCAGTC TAAC GACTGGGC             TTTTTTTCGTTTCCG 100 37
    AHA_0345  362580 ..  362596 +  -2.1    -3.767   TCCCCCTGGGCCAAG              GGTTACC ATA GGCCACC              TTTCGTCAATGAGTC  50 76
    AHA_0346  362973 ..  362987 +  -2.8  -3.49475   TTTTGGGCATTTCTT               CTTATC CGA GGTGAG               TTATGTACAAGTCCC  49 58
    AHA_0347  363503 ..  363528 + -20.5  -4.18018   CACGGTCAGGTATGG         GGGCCGCCATC GCGA GATGGCGGCCC          TTTTACATCAGGGCG 100 107
    AHA_0348  366009 ..  366033 + -17.3  -3.15354   GCCGTTATGACTCTT          TAATTGGCCCC CTC GGGGCCAATTA          TCTTCGGTTGGCATG 100 235
    AHA_0349  367218 ..  367255 +   -20   -2.9834   CGCTGTCACTCTCTT   CGACACCCGCCTGCCGC AGCCC GTGGCAG-CGGGTGTCG   TGTCGTTGTACTCGT 100 57
    AHA_0350  369858 ..  369876 +   -16  -4.30576   CAGGGTCAATGAAAA             CGGCGCCA TCA TGGCGCCG             TTTTCATGCTCCCCG 100 42
    AHA_0353  371036 ..  371051 + -11.8  -4.44284   GTGCAGACAAAAAAA              CGGGCC CTCA GGCCCG               TTTTGCTATTCCATT  95 74
    AHA_0356 NONE
    AHA_0357  375054 ..  375087 +  -6.1  -2.78384   CCCCACGAAAATTAA    TCG-CT-CGCCCTGC CTCAGC GCAGGGTGAAGTCGA     TGTCCTCGCCCGCGC  50 26
    AHA_0359  376833 ..  376847 +  -2.7  -2.57036   AGCGCCCGCCGCGCT               CGCCG AATCC CGCCG               CCTTTGTTATATTTC  40 53
    AHA_0360  377535 ..  377553 +   -16  -5.50499   CCAACAGAAAAGACA             CGGGGCTC GAC GAGCCCCG             TTTTTTTGCCTGTGA 100 53
    AHA_0362 NONE
    AHA_0363  379347 ..  379364 + -12.7  -3.07233   AGCCTGCTGATGACA             CGGCAGG CTTG CCTGCCG              TGTTGACCCTTCTGC  81 40
    AHA_0364  380987 ..  380998 +  -3.6  -3.05384   CCCAGCCCTGACGTC                CTGC TAGT GCGG                 TTGGGTGGGCGGGGC  45 30
    AHA_0365  382835 ..  382860 +  -9.7  -5.28176   ACATGCTATTTGCGA         GGGGGTGACAT GCGA GTGTCACCCCA          TTTTTTATGGCTCGC 100 393
    AHA_0367 NONE
    AHA_0368  385248 ..  385271 + -14.6  -3.58726   CCAGAACCACCATGA          CAGAGCCGGG ATTA CCCGGCTTTG           TTGTCTGTGCCGCGC  95 53
    AHA_0371  388372 ..  388389 + -12.7  -3.20382   GTCGTGCGCCCCCAG             CCCCGAC CCTG GTCGGGG              TTGGTCACTGTCAGG  83 75
        ftsE NONE
    AHA_0373  390304 ..  390326 +  -7.7  -5.52909   AGCATGCTACTTTTC           GGGGGTC CTTGATTGT GACCCCC           TTTTTTTGACTGTTC 100 295
        rpoH  391357 ..  391386 + -15.9  -3.54129   TGATGCTTCCTCCCA       TAAAAACAGGGCC TGAT GGCCCTGTTTTTG        TTTGACGGGGATCTG 100 38
    AHA_0375 NONE
        hutC  392874 ..  392890 + -15.1  -5.56264   ACTCTTTTTGACCAA              GCCCGCC TCT GGCGGGC              TTTTTTGTGTTTAAG 100 53
        hutI NONE
        hutG  395151 ..  395162 +  -2.2  -3.16564   CGCGTGGCTGCCCGG                CTGG TCCA TCAG                 TTAATCAAGTAGCGG  43 2
        hutU  396932 ..  396942 +  -6.8  -2.67588   CGGTGTCAAAGGAAA                 GGTG TAA CACC                 ATGTTTGAATTGACT  51 19
        hutH  398500 ..  398518 +   -16  -3.89215   CCGCCCATAACAAAA             GACCGCCC ATC GGGCGGTC             TTTGCGTTTCTGGCG 100 50
    AHA_0383  403818 ..  403843 + -19.1  -4.98255   GCCTGATGAATGCAA         GAGAGGGTCGC CTGG GCGACCCTCTC          TTTTTGTGGTTCAGC 100 35
    AHA_0385 NONE
    AHA_0386 NONE
    AHA_0387 NONE
    AHA_0388  407168 ..  407186 +  -5.8  -3.03124   CTGTTCAGTCTGCTG             GCCCAGGC GCA GCCCGAGC             TGTTGCAGGATCCCA  52 63
    AHA_0389 NONE
    AHA_0390  410237 ..  410257 +  -7.5  -2.77523   TCTATGTGCCACCCG            TGCGCCAGC AGG GCTGGTGGA            TGCTGTTGCTGACCC  55 101
    AHA_0391  411238 ..  411268 +    -6  -2.92513   CTCGAACAGCGGATT      GCCCAGCTCGCCC CCTGAC GGGCG-GCCGGGA       TCACTTTTTTGGAGT  51 8
    AHA_0392 NONE
    AHA_0393 NONE
    AHA_0394  414951 ..  414970 +  -2.1  -3.61715   AATGATTTTTTTATA            TCTGCAT GAAATA ATGCGGG             TTATTACGGAGGGTC  50 63
    AHA_0395  416120 ..  416140 +   -14  -4.39002   GATTGATAGATATCA            GGCGAGGC CAAGT GCCTCGCC            TTTTATAAGAGATTT 100 487
    AHA_0396 NONE
        mshD NONE
    AHA_0398  418100 ..  418114 +    -7  -4.72272   ATGGCCATGTTGGCG               GCGGCC ATG GGGCGC               TTTTTGCTCGACAGC  81 105
    AHA_0399  422236 ..  422257 +  -5.1  -4.83615   GCGTTTGTCGGCTTG           TGCGGGTGA GTGA TGACTCGCA            TTTTTGTCGCGCCTG  80 95
        mreB  423418 ..  423439 +  -7.2  -5.00616   TACGAATAAGACCCA           AAGCCGGC CAGCGT GCCGGCTC            TTTTTTGACGACCCA  91 32
        mreC NONE
        mreD  424848 ..  424864 +  -2.3  -3.32521   AATATCAAGTGAATA              TGAGT AAAAACA ACTCA              TTGTAACCGTATCCT  45 29
       maf-1  425574 ..  425592 +  -8.1  -3.72775   ACAGGCAAGGCATAG             GTCGGTG ACATG CACCGGC             TGTTTCTTACTGCGT  68 116
    AHA_0404 NONE
    AHA_0405 NONE
    AHA_0406 NONE
    AHA_0407  432298 ..  432309 +  -5.8  -3.53012   CGATGGTGGATTGGA                CGTC CGCT GACG                 TTTCGCCAAGCGAAC  57 94
        tldD NONE
    AHA_0409  434768 ..  434785 + -12.7  -5.60993   TGCCGATAGAAAAAA             CCACCCG CTTG CGGGTGG              TTTTTTTATGGGCCA 100 72
    AHA_0418  443138 ..  443187 +  -6.4  -2.81547   ACTCCACCTCCACCC CCAGCGCC-TCCTCGGCATGGACG ATGG CCTCCTTGCCGAGAATGGAG-TGG TGCTTCATCTGGGCA  50 360
    AHA_0424  450257 ..  450290 +  -7.9  -3.64703   GGCGCCATCGTGACG     CCAGGCCCGCACCCG ATGC TGGGAGTGGACCCGG      TTTCCCTCGGCCAGC  62 159
        aphA  451457 ..  451483 + -22.4  -4.18908   CCATGAATGGAAAAA         GGGCCGGATCCT GTC AGGATCCGGCCC         TTCTTTTGGGCGTCT 100 48
    AHA_0428  453730 ..  453746 + -15.1  -4.77036   TGATTTCATTGACCG              GGGCCGC GCT GCGGCCC              TTTTTCATGGTGACG 100 47
    AHA_0429  454419 ..  454438 +  -7.8  -2.91264   GGAGTAAGACAAAGA            GGCCGC CGTGAGTT GCGGCC             TGTCTGCATCGGGCG  56 97
        metH  460331 ..  460374 +  -7.5  -3.54741   ATCCTGGATGAATAA CGGCGGCATCCTGTATTGG GGGACAGA CCAGT-CTGG-TGCCGCCG TTTGACAAGCTAGTG  62 70
    AHA_0433  461446 ..  461474 + -15.4  -4.64598   TTGCCGCCACTCCAT       CACACAGGGCGCC TTCG GGCGCCCTGT-TG        TTTTTGGGCTCATTG 100 49
      brnQ-1  463189 ..  463216 + -14.2   -4.7254   GGTGGTTGAAACAAT        GAACAAGGCGCC CTCG GGCGCCTTGTTG         TTTTTACTCCCGCAT 100 69
    AHA_0437  466223 ..  466235 +  -6.3  -3.41689   CAGAATAATAACCGT                GTCAT CCC ATGAC                TTAATATATATTTTG  56 33
    AHA_0438  468016 ..  468032 + -15.1  -4.17309   GTTGTGGTAATAGAA              CCGGGCC TCT GGCCCGG              TTGTTGTTTGTACTG 100 50
    AHA_0439 NONE
    AHA_0440  472093 ..  472105 +  -3.3  -3.36569   GAGGCGGCCCATGCT                CTCTG ATG CTGAG                TATTTGCGCGATTCA  47 20
        thiF NONE
        thiS NONE
        thiG NONE
        thiH  475198 ..  475213 + -11.8  -3.57462   CTTCCTGGGTCGATA              GGGGCG GCTA CGCCCC               TTTGCCGGTGGCATC  81 25
    AHA_0445  478450 ..  478480 +  -8.8  -3.01712   CACTCAAAGGTGGCC       CCGGCGGCGATGGC AAC GGCTTCGCTGGCGG       TGTTGCCAACCCCCA  57 268
    AHA_0447  479839 ..  479874 +   -25  -2.73364   GACGCGACCGTTCAA    GAAGAGGGTTGAGTGC CTGT GCACTCAACCCTCTTC     TCATTCCAGTCCCGC 100 44
    AHA_0450  482333 ..  482344 +  -2.2  -5.26316   TGATCATGTTGATCG                CAGG CGGG CTTG                 TTTTTTCTACGATCC  78 373
    AHA_0451  483744 ..  483763 +   -15  -5.19251   CGCACAAGTCAAAAA            GGGCGACC CATG GGTCGCCC             TTTTTCTTGGTGTTG 100 51
    AHA_0453 NONE
    AHA_0455  485967 ..  485991 +  -4.8  -4.18494   TTCGAACAGATAGAT          GCCGCCCGCC TCGCC GGTGCGCGGG          TTTTCGGTCCAGATC  65 153
    AHA_0457  486750 ..  486761 +  -3.6  -3.62096   CTGCAGCCGCAGGGT                CGGC AACC GCTG                 TTTGGCGTGCTCGAG  51 163
        glpX  495396 ..  495412 + -13.7  -5.25699   TGCTGAACGACCAAA              GCCCGAC GCT GTCGGGC              TTTTTGTTGTCTGCT 100 57
    AHA_0465  495886 ..  495905 +   -15  -5.33405   CAATCCCAATAAAAA            GAGGCCGC AACT GCGGCCTC             TTTTTATTTCGTGAC 100 138
        cyaA  502779 ..  502798 +   -15  -3.70902   CATATCGAATGAAAA            CGGCCTGC ATCT GCAGGCCG             TTTGGCTATCCGCGG  95 109
        lysA  505298 ..  505319 +  -2.9  -2.96517   GTTGGCCGATCTCTG           GCGCGGTGA GCAT TTACTGCCC            TGATTGTTAATGGAT  42 1
        dapF  506260 ..  506274 +  -8.5  -4.62069   CCAAGCACTAATGTC               GGGGC CTTGT GCCCC               TTTTTCGGATGGACC  87 67
    AHA_0475 NONE
        xerC NONE
    AHA_0477  509116 ..  509136 +    -9  -3.68351   GCCACCCCGGGCTGG           CCC-CCAGC AGCT GCTGGCGGG            TTTCAATGGTCGCGG  71 441
    AHA_0480  511466 ..  511502 +  -2.8  -3.16564   GATCAGCCCGTCTTC   GGCATGGGCCA-GCGGC TCCA GCCCCTTGGCCAGCGTC    TTGATCCCCTGGCCG  44 194
    AHA_0484 NONE
    AHA_0485 NONE
    AHA_0486  518675 ..  518687 +  -6.2  -2.79183   GCGGCACGCCGTCCG                GGCC TGCGC GGCC                TATGGTCAGGCTGAG  46 294
        metA  522502 ..  522520 +  -2.2  -3.18264   GGGTCAGCAGCAGCT             GACCATCG ACG CGGGGGAC             TTCCTGGCTCCAGAA  43 489
    AHA_0491  523204 ..  523229 + -11.9  -4.65916   CGTCTGCCTCCTACA         AAAAACCCGCC AATC GGCGGGTTTTG          TTTTATTGCGCTCAG 100 46
    AHA_0493  525849 ..  525874 +  -8.2  -5.02074   GGCTTCGCCTCTGAG         GGCTTGCCGC CACCGC GCCGCAGGCC          TTTTTTGCAGCCTGA  95 152
    AHA_0494  527987 ..  528000 +  -5.2  -2.78463   CAGTCACAGACCCGT               GCGG GCGGGG CCGC                TATCATGGCCCCAGT  47 77
    AHA_0495  529698 ..  529716 + -12.4  -4.72272   GGTTGGCAACAAAAA             GGGCTCCG TGA TGGAGCCC             TTTTTCATGGGGGAA 100 45
    AHA_0498 NONE
    AHA_0499 NONE
    AHA_0500  533465 ..  533484 + -13.6  -3.44672   GCTGACGAAATAAAA            GAGGCTCC CAAG GGAGCCTC             TCTGTTTTGGTGGCC  88 49
    AHA_0502  536025 ..  536045 +    -9  -3.61398   CACGGCAACAAAAAA           GGGAG-GGC GGCT GCCACTCCC            TTGTTGACCGGACGG  68 157
    AHA_0504  538216 ..  538234 + -12.4  -4.22652   CGAGCAGAAAAAAAA             CGCCCCGA TCA TTGGGGCG             TTTTGCATGGTGTCA  93 181
    AHA_0508 NONE
    AHA_0509 NONE
    AHA_0510  543635 ..  543654 +   -15  -5.54338   GCAGTATCAAAGCAA            GGGGCCCA GATA TGGGCCCC             TTTTTATTTTGGTTA 100 46
    AHA_0514 NONE
    AHA_0515  546710 ..  546733 + -18.2  -2.74192   CCGAGCCCAATGAAA          GAGACCCGCC TGTT GGCGGGTCTC           TGCTATTGAGGGGTC  95 53
    AHA_0519  553347 ..  553390 + -11.3  -3.61902   TAGAGTGCCTTAACG TGTGATCAGGGTTGTGGTGGT GCGA ACCACCACAAC-CTCA-CACA TTCTGTCTCCTCACA  79 41
    AHA_0520  553821 ..  553833 +  -3.4  -3.28119   CTCAATTATATGTAA                GCAA GCCAA TTGC                TTAGTGTAGATACCT  45 26
    AHA_0521 NONE
    AHA_0522 NONE
    AHA_0523 NONE
    AHA_0524  559091 ..  559107 +  -3.7  -4.05181   ACCACTATTTCCCTG              TTCATGG TGA CAATGAA              TTTGCTCTTTCTGGT  61 350
        menA  568524 ..  568543 + -12.8   -5.1963   ATCGGCAAGGCAAAA            GGGCTCCC GGAC GGGGGCCC             TTTTTGTTGGTTGGG 100 55
    AHA_0534  568833 ..  568858 + -20.5  -3.06133   GGCGCGCTGAAACCA         GGAGGGCTCCC GTGT GGGAGCCCTCC          TTGAGTGGCGGCTTG 100 42
    AHA_0536  571433 ..  571448 +  -4.6  -3.40403   TCGGGTTGTCTGGGT              CATGGC ATCT GCCTTG               TTCTCATGGGCACGG  53 497
    AHA_0539  574679 ..  574704 + -17.7  -5.00616   CCGCTCTCTCCATGA         CAAACCCCTGC CTCG GCAGGGGTTTG          TTTTTTGGGGCGACA 100 50
        zntB NONE
    AHA_0545  578418 ..  578433 + -10.4  -5.03314   ACCGGAATGAGAAAA              GGCTCC TGCG GGAGCC               TTTTTTGAGCCTGCC 100 31
        ahyR  592190 ..  592200 +  -8.2  -3.36327   ATGGCGGCCCTTCTG                 CCCC GAA GGGG                 TTATGCCTGCCCTGC  64 112
    AHA_0558 NONE
    AHA_0559  595070 ..  595088 +   -16  -4.72272   ATGGCAATAAAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTCATGGGCGGA 100 53
        gspC NONE
        gspD NONE
        gspE NONE
        gspF  608569 ..  608584 +  -5.4  -2.96695   TAACAGTTAATCGTT              GATGGT TCAT GCCATC               TCATTTCGTGAGGGA  49 103
        gspG  609106 ..  609120 +  -2.7    -4.371   GGTGGCCTCTTCTGC               CCGTC GCCAG GCCGG               TTTTACTCTGCTGGA  62 93
        gspH NONE
        gspI NONE
        gspJ  610823 ..  610846 +  -6.1  -3.04144   TCGTCATTTTCCCCT          GT-CCGTCAT GGAAG ATGACGGCAC          TATTCGACGTAGCCA  52 41
        gspK NONE
        gspL NONE
        gspM  613722 ..  613754 + -10.6  -3.60627   CCCAATGAAACCACG     CGTCCCGAGCAGG-GC CCC GCGCCTGATCGGG-CG     TTTGCAGTCGAGTCG  74 33
        gspN  614560 ..  614591 + -20.2  -3.29511   TGAGCTGGCAAGCAT      CAACACCACCCCGC CCCG GCGGGGTGGTGTCG       TTATGGGGGCGTGCC 100 54
      tyrS-1  616850 ..  616867 + -12.7   -5.0065   ACCCGGGATCGACAA             GGGCTGC CTGG GCAGCCC              TTTTGTTTATCCGTC 100 44
        nudE NONE
      cysQ-1  619216 ..  619246 + -25.6  -3.29649   AGGTCATCATTGACG       GCAATCAGGCGGCC CAT GGCCGCCTGATTGC       TTGGTGTGATCCGCT 100 51
    AHA_0585  620899 ..  620924 + -19.1  -3.52102   CCAGCCGCAAATAAA         GAGAGGCGACC CTGG GGTCGCCTCTC          TTGTATCGGTCCGGT 100 51
        metB NONE
        metL  626346 ..  626364 +   -16  -5.38549   AGTCGTTCAGTCAAA             GAGGCGCC AGT GGCGCCTC             TTTTTATTGTTTAGC 100 50
        argC  632226 ..  632236 +  -8.2  -2.91144   ATTCGGATTTGAACC                 GGCC ACC GGCC                 TGATTTAAGGACTCA  59 7
        argB NONE
      argF-1 NONE
        argG  635303 ..  635321 +   -16  -3.07816   CCCGTTGATTCCGTT             GAGGGGGC ATG GCCCCCTC             TTCCATAGGTCGAGG  93 54
        argH  636905 ..  636922 + -11.3  -4.75309   AATAAGAACAAAAAA             CGGCAAC CGAT GTTGCCG              TTTTATTCAATTTAC 100 61
    AHA_0604  642914 ..  642929 +  -2.4  -3.05935   CCGGGTCGCTAAGCG              GCCGGC CATC GTCGAC               TTAACTGGCCCCTGT  42 29
    AHA_0605  643652 ..  643675 + -11.2  -5.81622   GACGCTCCATTTTTA          GGTCTTTTAT TTAT ATAAAAGACC           TTTTTTTCATTTTAT 100 135
        cysT NONE
        cysW NONE
        cysA  646799 ..  646821 +  -3.3  -2.74784   AGGCCCCGACCGGCC           GGTCAGCGC AGGAG GCGATGACG           TGAATTTTCAGCAGT  41 180
    AHA_0609  647783 ..  647813 + -18.4  -3.25719   AGGTGGTGCATCAGA       GAAAACGGGGAGCC AGT GGCTCCCCGTTTTG       TTGATGGTGTCATGC 100 40
    AHA_0612  653548 ..  653573 + -19.1  -4.25104   GAACATGCGTTATGT         CAGACCCCTGC CGCG GCAGGGGTCTG          TTTTCATGGGAAGGA 100 54
    AHA_0613  654393 ..  654411 +  -5.8  -3.02144   CCCCTCCTGATGCCG             GCCCGGGC TCA GCCCTGGA             TCTTCAGCACGCTGA  52 31
    AHA_0615 NONE
    AHA_0616  658955 ..  658993 + -30.5  -2.87132   GCAGCCGGCCTGATG   CAACAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTGTTG   TCTGTCAGAGGAGCC 100 28
    AHA_0618  662964 ..  662991 + -13.4  -5.02476   AGCCCTGACTCTCTG        CAGCGCGCCACC TCCG GGTGGCGTTCTG         TTTTTTGGGCCCTCT 100 33
    AHA_0619  664182 ..  664214 +   -15  -3.40071   AGGCCCGTGATCTTG      CATGGCGGATGTCT TCATT GGATATCCGCCATG      TTGTGAATGTCACTT  95 383
    AHA_0620  665823 ..  665866 +  -6.7   -3.4252   CTGAGTACGGCAGAC GGGCAGGGGCGGC-GCGCACCG CGA CGGTGAGCCGCTGGC--TGCCC TTCTCCTGCGTGGAC  58 37
    AHA_0621  666757 ..  666785 +  -3.8   -5.1675   CTACAAGGCAAGATT       G-GACGGCGAACC GAGC GGTTCGGCGTGGC        TTTTTTGCTGCCTGA  81 82
    AHA_0622  667306 ..  667316 +  -8.2  -3.21276   GCTGGCGAAACCAGC                 GCCG GGC CGGC                 TCTTCTCCGGCCGGG  58 115
    AHA_0626  670943 ..  670968 + -19.1  -4.88067   GGCCGCCCGCAACAG         CAGGAAGGGGC CAAG GCCCCTTCCTG          TTTTTCTGGCTCAGT 100 53
    AHA_0628  675798 ..  675823 + -16.1  -5.35815   GAGAGAGTAAGCAAA         GCGCGACTGCC GACC GGCAGCCGCGC          TTTTTCTTTGCTGTG 100 115
    AHA_0630  679056 ..  679082 + -25.2  -5.60993   GCAGACTGACAACAA         TCCCGCCGGGGC ATG GCCCCGGCGGGA         TTTTTTTATGGAACA 100 45
    AHA_0632  681338 ..  681360 +  -2.7    -3.727   GATGGACTGCCCGCT          TGGGCAGTACC AAA GG-AC-GCCCG          TTTCACTATGCTCCA  51 57
    AHA_0633  682913 ..  682928 + -11.8  -5.18726   GCGGGAAAATGCGAA              GGGCCC TGAC GGGCCC               TTTTTCTTGTGGAGA 100 43
    AHA_0640 NONE
    AHA_0641 NONE
    AHA_0642  692854 ..  692871 + -11.3  -5.33848   TGCCCGAAACACCTT             GCCGATC AGAT GATCGGC              TTTTTTCATTATCCT 100 115
    AHA_0643  693556 ..  693567 +  -3.6   -2.9294   GGGTGAACCGGCCGG                CGTG CCCG CGCG                 TATGTCACTCATCTG  44 43
    AHA_0644 NONE
    AHA_0645  695209 ..  695225 +  -6.5  -2.78715   ATCGAGTCAAATCAG              CCAGTTG CCG CAACCGG              TATCGTGCAAACGTT  52 82
    AHA_0646  696563 ..  696578 + -11.8  -5.25803   CACCTTCCGGTCAGA              GCCCGC TTCG GCGGGC               TTTTTTGTGGCCGTT 100 57
    AHA_0649  698332 ..  698359 + -15.6  -4.41348   GATTGACTCCATGGT        GGGGCCAGATAG GATT CTATCCGGCCCC         TTTGTTTGAACAGGG 100 79
    AHA_0650  699494 ..  699522 +  -2.9  -2.98719   AAATTCGACTTGTAA        TTCAGATGGGGCC AAG GGCCCCATCAACC        TCTGTGGTCTCATGA  42 26
        fbpB  701183 ..  701197 +  -9.2  -2.90075   ACACTGGAATGTTGT               CCGGCC GCC GGTCGG               TCTGGTTCAAAAGAA  62 49
    AHA_0652 NONE
    AHA_0653  703300 ..  703317 + -12.7  -4.43272   TGCAGATAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTTTTGGCT 100 53
    AHA_0655 NONE
    AHA_0656 NONE
    AHA_0657 NONE
        artM  706876 ..  706915 + -10.8  -5.22039   AGATCTACCTATTAA  TGGTGAGGGGAAGTGCAGG AAA TCTGTGCTTCCCCTC-CAA  TTTTTTGCATTTCCC 100 48
         mdh  708031 ..  708048 + -12.7  -4.11281   CCGGATGGACAGCAA             GGGGAGC TTCG GCTCCCC              TTTGTCGTTATGGTG  95 46
    AHA_0660  709476 ..  709496 +  -6.8  -3.35073   CCAGGTGATGTCGGC            CTGATGGC CCTTC GCCAGCAG            TTGGTTGAGCATGCT  55 455
    AHA_0662  710932 ..  710948 + -13.7   -5.1615   GTGAGCAAGCAAAAA              GGCTGCC AGT GGCAGCC              TTTTTTCAATCTTCA 100 37
         ffh  714744 ..  714764 + -14.7  -4.25104   TCATGCACACGTCAA            GGGCTCACC ATG GGTGGGCCC            TTTTCATGGGGCCGC 100 52
        rpsP  715133 ..  715146 +  -3.7  -3.14132   AAGCTGATCAAAGAC               GCTGC CAAA GCTGC                TTAATCAGCCAAACG  45 8
        rimM  715686 ..  715696 +  -3.2  -3.54424   AAGTTGATTGGGATC                 CTGG TTT CTAG                 TTTCCCGCGCTAACA  49 15
        trmD NONE
        rplS  716915 ..  716933 +   -16  -5.37043   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTATCCGCT 100 80
    AHA_0672 NONE
      ptsI-1  721599 ..  721611 +  -4.9  -2.60808   CAAAACGAAACAGAC                TGATT GAT AATCA                TGCCTTGTCCCTGCT  44 19
         lgt NONE
        thyA  723299 ..  723315 + -10.8  -5.28176   CCATCTGATGTGAAA              GGCGCC CATGA GGCGCC              TTTTTTATGCATAAA 100 33
        nhaA NONE
        nhaR  726013 ..  726024 +  -2.2  -3.10597   CACCACGATTCAACC                GGCA ACCC TGTC                 ATTTTAAATCGACGG  42 7
    AHA_0678  726388 ..  726403 +  -7.5  -5.59564   AACAGAAATAAAAAA              CCGGC ACGAAG GCCGG               TTTTTTTAGCTTTGT 100 30
        mviN  728544 ..  728566 +  -3.3  -4.25104   GGCTGACCCAGAGTG           CCGCCTGAT ATATA ATCCGGCGA           TTTTCATAGCAGCGA  62 115
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB  733376 ..  733387 +    -3   -3.4811   ATGACGAGGAAGCGG                TTCA CTGA TGAA                 TATTCTTCTGGCCAA  49 18
        ispH  734358 ..  734377 + -13.6   -4.7254   GCCATGAGTGCCTGA            GCCACCTC CTGT GAGGTGGC             TTTTTCATGGGCGAT 100 65
    AHA_0686 NONE
        pilV NONE
    AHA_0688 NONE
    AHA_0689 NONE
    AHA_0690 NONE
    AHA_0691  741064 ..  741078 +  -4.2  -3.61356   ACTGGTATTGGAAAC               CCGGAA CTC TTCCTG               TTTCAGCTGCATGCT  53 243
    AHA_0693 NONE
    AHA_0694 NONE
    AHA_0695 NONE
    AHA_0696  745700 ..  745720 + -18.3  -5.04733   ACCCCTTGAGCCTTG            GGCGCTGGC ACA GCCAGCGCC            TTTTCTTTATCATTC 100 32
        nadE NONE
        glnB NONE
    AHA_0699  748370 ..  748383 +  -8.1  -3.40522   GCAAGGATCAGCTCT               CCAGC GGGG GCTGG                TTCTGGTAACCAAAT  64 3
        luxS  748945 ..  748963 +   -16  -4.68593   GGCAAACATGAAAAA             GGCCGGTC AAT GACCGGCC             TTTTTGCGTGCTGAC 100 50
         rnr NONE
    AHA_0703 NONE
    AHA_0704  753878 ..  753894 +  -2.1  -3.44051   TGCCGGCTCGCGTGT              GGCTGGC TAT GCTGCCC              TTCTCATCATGAGCA  45 41
    AHA_0705  754552 ..  754593 +  -5.1  -3.61398   TGAGCCGTTGAGCCA TTTTATTAGCGTTCGCCAC TCGA GTGGCTGTCGCTGATGGAG  TTGTTGCGCAAGCGG  55 208
    AHA_0706  755499 ..  755544 + -10.5  -3.19602   GCAGGCATCTTATGA GGCCGCTCTCTGTCATGGCCGG GCAAA CCGGCTATG-CTG-G-GCGGCC TGTTGCTATCGGAAC  71 76
    AHA_0707  756697 ..  756709 +  -5.5  -3.11619   CGCCAGATCTGCCAG                CAGTG CCT CGCTG                TTGACTCCCTTCTTG  51 320
        rpsF NONE
        rpsR NONE
        rplI  760025 ..  760042 + -14.1  -5.79595   CTTTTGCAGAAAAAA             CCCGCGC ACTT GCGCGGG              TTTTTTATTTTCAGG 100 51
    AHA_0713  760855 ..  760868 +  -9.5  -2.88544   AGAGAAATGGACACA               GGGGC CTCG GCCCC                TGTGTCAGGGTAACG  65 39
    AHA_0715  762519 ..  762536 + -12.7  -5.06816   GGGAGTTGATCATCA             GGCCACC GCAG GGTGGCC              TTTTTATTGCCGCGT 100 32
    AHA_0717 NONE
    AHA_0718  764161 ..  764177 +  -4.4  -3.28368   TTATGCCCTGGTCTT              TCTGCT GGCCA GGCAGA              TCTTCTAGCTTCACT  49 1
    AHA_0719 NONE
        gshA  768690 ..  768707 + -12.7  -5.24531   CCATTTCTGCTGCAA             GCCGCTC TTCG GAGCGGC              TTTTTTATGGGCGGT 100 47
    AHA_0721  770159 ..  770175 +  -9.4  -5.65927   GACAAACAGCAAAAA              GCCGCT CTTGA AGCGGC              TTTTTTATTTCCCTG 100 47
    AHA_0723  772721 ..  772739 +  -9.6  -2.78762   GCAGGATCCGGCTCT             CGACAACG CGC CGTTGTTG             TAGTGTTGCTGCTGT  64 4
    AHA_0725  775766 ..  775776 +  -6.8  -2.76696   ATCAAGCGCTCCCCG                 CTGC AGG GCAG                 ATTGTTGCAAAAGCG  52 198
        yieM  777123 ..  777139 +  -5.7  -3.37499   CGTCAGCAGCGAGGC              TGGTGGC CGA GCCCCCG              TTCGTTGACCTGTTC  56 48
    AHA_0728 NONE
    AHA_0729  780198 ..  780225 +    -9  -3.94812   AGGGGGCGCAGGCTC        CCCTGCTCGCCT GCAA AGCCGGGCTGGG         TATTTTTCACTCGCG  76 39
        prfC  782065 ..  782084 +   -15  -5.47218   GACAAGATAAAAAAA            GACCCCGC CCAG GCGGGGTC             TTTTTTTGCATGGCG 100 62
    AHA_0731  782595 ..  782645 + -10.4  -2.71712   CGTCCGCTAACACCG GCTGG-TGTCAGGCCTCGCCCTC CATGCC GCTGGCGAGGTTTGCCAACCAGC GTTTGACCAGCAGCA  66 85
    AHA_0733  783635 ..  783654 +  -9.2  -4.46926   GGCAGGCAAACAAAA            GGACGGCA TCGC TGCCGCCC             TTTTATCCTGAGCTG  85 43
    AHA_0736  786617 ..  786666 + -25.3  -2.78384   GCGGGCGTAATGCGC CGCCCATAAACAACCATGGCTCC CGCG GGAGCCATGGTTGTTTATGGGGA TGTCATACACCGCCG 100 31
    AHA_0738  788984 ..  788998 + -11.4   -4.6955   TGTAGACATTCAAAA               CCCCAC GCC GTGGGG               TTTTATCTCTTGATG 100 54
    AHA_0739  790839 ..  790857 +  -8.1  -6.09196   ATAACGAAAACAAAA             CCACCCG CCATT TGGGTGG             TTTTTTTATTTTCAG 100 79
    AHA_0740  793325 ..  793371 +  -9.3  -3.74693   CGGGCGTTTCTGGCA GGGGGACGCCCTTG--CCTCCAG TTT CGGGCTGTTCAAGGGCGGCCCCC TTTCATAAGATGGGC  70 96
    AHA_0741  794741 ..  794754 +  -9.5  -5.45652   CGAAAAACAAAAAAA               CGCCC GACT GGGCG                TTTTTTATTGGCGGT 100 56
    AHA_0744  798440 ..  798452 + -10.5  -2.64933   GCGCACCCGCTTCGA                GCCGG CGG CCGGC                TAGTGTGACTCAGTC  66 10
    AHA_0746  800020 ..  800035 + -11.8  -4.41494   TTTCATCAACGACAA              GGGCGC TGCG GCGCCC               TTTTCATTGCCGGTC  95 49
    AHA_0749  801919 ..  801932 +  -3.1  -2.53213   CGGTCAGCCGGACTT               C-CTGC TGC GCAGCG               TACGTTGACCACTTA  40 4
    AHA_0750  802282 ..  802296 +  -5.6  -3.35046   CCCGAGCGGCAAGAG               GCGACA TCA TGACGC               TGTTTGCCGAACTGG  53 14
    AHA_0751  803657 ..  803676 +  -6.4  -4.08958   GTAGAATGCCACTCC            CGCAGC AGCAAAAA GCTGCG             TTGTTCTTTAACAAT  67 334
        rrsE  805455 ..  805476 +  -8.7  -3.05069   AGTTAGAGCAAAGAC           CTGATGCGC CTTG GCGTGTCAG            TGCTTGTTTGGTGAA  63 88
    AHA_0753  805690 ..  805717 + -14.4  -4.65747   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCAGCCTTG 100 50
        rrlE NONE
        rrfE  809041 ..  809054 +  -5.3  -3.18264   CCAATTAAACGGTGA               TGTGA AGAA TCACA                TTACTGGCTGCGAGG  52 40
    AHA_0756  809210 ..  809231 + -15.9  -4.85129   GCCACTAATTTGAAA           GGCCTTCCC AGAT GGGAAGGCC            TTTTTGCTATCTGGT 100 37
    AHA_0757  810350 ..  810377 +  -5.4  -3.28712   GATCTGGCCCGCTTG        CGAGAAGCGCAA GGCA TTGCGCAGCACG         TTGTCGAGGGCCCGG  50 321
    AHA_0760 NONE
    AHA_0761  815474 ..  815496 + -13.4  -4.91109   CTCTGCGCGGGTTTT           CAACCGGGCC CCT GGCCCGGTTC           TTTTTCTCATGCGAA 100 185
    AHA_0767  822241 ..  822256 + -11.8   -4.4078   CATCCACTATCATCA              GGGCCC TGCG GGGCCC               TTTTCATTGCCGCGC  95 63
    AHA_0768  824593 ..  824617 + -17.2   -2.6063   CGCGTTATCGCCATG          CAGAGCCCGC CCCGT GCGGGCTCTG          TGCATTGTGGGTCGC  90 52
    AHA_0769 NONE
    AHA_0770  826095 ..  826112 + -14.1  -3.37761   GAGTGAATACAACAA             GGGGCGC CTCG GCGCCCC              TTCGGTTTATTCCCC  95 52
    AHA_0774  831911 ..  831921 +  -2.4  -5.02357   CCAGCTCTCAGCTCG                 GGGG GCG CCAC                 TTTTCTTTGCTTGTC  74 88
    AHA_0775  832629 ..  832652 + -16.8  -5.36441   TGTCGGAAGCAGAGT          GAAGGGTCGC CATG GCGACCCTTC           TTTTTTGTCTGGAGA 100 48
    AHA_0776  836060 ..  836077 + -14.1  -4.73388   CCGTGACCAACATCA             GGCCGCC TGCG GGCGGCC              TTTTTCATGGGCGTT 100 45
    AHA_0777  837029 ..  837057 +  -2.3  -2.62613   AGCCTGAGGGATGCA       AAGA-GGGGCGC TTGTTT GCGCCCCTTCAC        ATCTTTGCACTCCAA  38 34
        hemE  838256 ..  838273 + -14.1  -4.39166   CAGCACAGTGAACAA             CGGGGCC TGGG GGCCCCG              TTTTGCTGTCTGCGG 100 51
    AHA_0779  839319 ..  839332 +  -2.3  -2.80816   GGCCCGCGGTGAATT               TCAGG ATGC CCTGC                TGTCGTGAGTCAGCC  39 4
         epd  840397 ..  840427 +  -2.4  -4.67234   CATGATGGCCGCAGG       CTGAAAGCTTGCAC CGG GCGCAAGGTTACTG       TTTTTAACATTACCT  65 22
         pgk  841633 ..  841662 + -17.9   -4.0162   AAAGCCTAATTGACC       CGAGACGGGGGGC AAAA GCCTCCCGTTTCG        TTTATCATGTGCCCG 100 32
        fbaA  842852 ..  842869 + -14.1   -4.8622   TTGATTGCATGAAAA             GGCGCCC TGCG GGGCGCC              TTTTTCATTGCAGCA 100 55
    AHA_0783  844489 ..  844514 + -12.7  -3.31322   GGGGGATAGGGTGGA         TACCCAGGCCTG AGT CAG-CCTGGGTA         TTCTGGCCGGTTGCG  84 167
    AHA_0787  847725 ..  847760 + -11.3  -4.75404   CGGGCTTGTCCTCCC    CCA-GCACCATCATGC CCCTT GCATGATGGTGCCTCG    TTTTTCCTGCCGTTT 100 59
    AHA_0789  849204 ..  849233 + -21.5  -3.16676   CGCTGGCTGAAGGAG       GCCCTGCTGGCGC GGGC GCGCTAGCAGGGC        TCTTCGCTTACTCGG 100 2
    AHA_0791 NONE
    AHA_0792  851368 ..  851387 + -11.4  -4.24342   AGCAGGTCGATGCGG            CGCTTGGC CCGG GCCAGGCG             TTTGTTGGTACGCAC  84 467
    AHA_0794 NONE
        rseA NONE
        rseB  855154 ..  855190 +  -7.4  -3.08278   CCGATGCACTGTTGC   TTG-CCCAATCCGGGCA GTCA TGTTCAGATTGGGTCAA    TCTCTGTCTAGTTAA  57 44
        rseC NONE
        lepA NONE
        lepB NONE
         rnc NONE
         era NONE
        recO NONE
        pdxJ  861748 ..  861765 + -12.7  -4.85599   GGTACGAAGAGAAAA             GGGACGC CACG GCGTCCC              TTTTTGTCAGCTCAA 100 66
    AHA_0813  872052 ..  872083 + -23.2  -2.70932   ACTCGATGGAGAATG      CGAAAGAGGGACGC CGCG GCGTCCCTCTTTCG       TGGTTGGGGGCAAAG 100 47
        rumA  877914 ..  877933 +  -5.1  -2.52676   GCTGGCGGAGAACTC            TATTGTC TTTCTT GACAATA             TGCCTTGAAAAAATC  46 176
    AHA_0818  880260 ..  880286 + -13.1  -4.63184   CATCAACAACCAACT        C-GTGACCGACC GCCA GGTCGGTCACTG         TTTTTCCCCTGCGTT 100 45
    AHA_0819 NONE
        pyrG  882914 ..  882940 + -11.5  -5.46629   TAATTGAAAATAAAT         GCGGTTGGGGC CCTGT GCCGCAGCCGC         TTTTTTTGGCATATT 100 38
         eno  884320 ..  884339 + -16.4  -5.05505   TCCACGCTTTGCAAA            GCCCCGCC AATC GGCGGGGC             TTTTTCGTTTCTGCT 100 53
    AHA_0822 NONE
        ispD  885508 ..  885527 +  -3.6   -3.2032   CCACAGAGGAGCTGG            CATGATCCG GAT TGGA-CATG            GTTTTGATGTACACA  47 21
        ispF NONE
        truD NONE
        surE  887773 ..  887788 +  -3.2  -2.82516   GGGGGCTTGGTTGGA              CCTGCA GGGA TGAAGG               TGTGATAGTACAGCG  41 13
         pcm NONE
    AHA_0828 NONE
        nlpD NONE
        rpoS  891110 ..  891124 + -12.8  -4.77036   CAAGTAAAACAAAAA               GGGGCC AAA GGCCCC               TTTTTCATGCTGGCA 100 68
        rpsU NONE
    AHA_0833  893047 ..  893072 + -11.9   -5.8901   TGTTTGGTCAAAGAA         GCCGTGC-TTCC CTG GGAATGCGCGGC         TTTTTTATTTTCTAT 100 54
        dnaG  895017 ..  895041 +  -7.1   -4.6821   TCATGACCGACGCCG          CAACCAGACAT AGC ATGTCTGGCGG          TTTTCTATTAGAATT  81 148
    AHA_0835  897010 ..  897026 + -15.1   -4.7878   AACCGCTGCCAAAAA              GCCCCGC CAT GCGGGGC              TTTGTTTTATCCGTG 100 62
    AHA_0836  897251 ..  897282 + -17.4  -3.92522   GGGGCCACCATTTTC      AGACAAAGCCGCTC TCTT GAGCGGCTTTGTCG       TTTCTGGCGTTCACC 100 31
        zntR NONE
    AHA_0843 NONE
    AHA_0844  906472 ..  906500 + -23.3  -4.24534   AGGCATCAGCTAAAA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTCTCTATTCGTTG 100 57
    AHA_0847  909846 ..  909862 + -15.1  -3.76232   TGATGGGCACACTCA              GGGGGCC TTG GGCCCCC              TTCTCTATTTGGCAG  95 52
    AHA_0848  911200 ..  911212 +  -2.6  -4.57569   GCGCGCCTCTTGGCT                CCCG GCATA TGGG                TTTTTCACCGGGTGA  65 248
    AHA_0851  914888 ..  914907 +   -15  -5.61596   CGTAATAGAGATAGA            GCGCCGGA CTTG TCCGGCGC             TTTTTTTATGCGGAT 100 52
    AHA_0853  917302 ..  917318 + -10.1  -2.63073   TGTACTGCAGGGCCA              CGGCGAC CAC GTCGTCG              GTGTTCTTGCCCAGC  63 113
    AHA_0857  922805 ..  922830 + -12.5  -4.09685   GCAGCGCCGCCTTGG         C-GCGGGCCGGG TTG CCCGCCCCGCAG         TTTTGCGAGATGAAG  86 462
       groES NONE
       groEL  925964 ..  925983 + -12.8  -5.93809   GCCCTGGTTACCAAA            CGGCTCGC TTTT GCGGGCCG             TTTTTTTTATGGCGA 100 45
    AHA_0861 NONE
    AHA_0862  928753 ..  928775 + -14.9   -5.4251   GACCCTAACGAAAAA           GCCCCCATC CAGTC GATGGGGGC           TTTTTTATGTCTGCG 100 286
        rrsF  934632 ..  934653 +  -8.7  -3.05069   AGTTAGAGCAAAGAC           CTGATGCGC CTTG GCGTGTCAG            TGCTTGTTTGGTGAA  63 88
    AHA_0866  934867 ..  934894 + -14.4  -4.65747   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCAGCCTTG 100 50
        rrlF NONE
        rrfF  938216 ..  938235 +   -15   -5.4833   ACCCAATACAAGAAA            CCCCGCTC AGAT GAGCGGGG             TTTTTTATTGCCTGA 100 32
    AHA_0869  938984 ..  939015 + -18.8  -5.44119   CGATGAATCGGTCAA      TGCCCCGGCTCAGCA CAC TGCTG-GCCGGGGCG      TTTTTTTAGGATGAG 100 68
    AHA_0870 NONE
    AHA_0871  941996 ..  942041 + -17.1  -4.66537   CGGTTGAGTGATTGA GC-GCAG-GCAAAAGGCCGGC CTTGGT GCCGGCCTTTTGCATTGCTGC TTTTCTGTTCGAACG 100 34
    AHA_0872  943594 ..  943613 + -13.6  -5.15634   TCTTCGTATGAAAAA            GGGAAGCC AAGC GGCTTCCC             TTTTTTGATCCCGTC 100 53
    AHA_0877  947727 ..  947749 + -13.5  -4.00124   ACCCTTCGTCATGCA           TCGACCAGC CCCGC GCTGGTCGA           TTTCCTTCTGGCGTA 100 52
    AHA_0883  954607 ..  954620 +  -9.5  -5.17353   CCTAGACAGCAAAAA               GGGCC ATTC GGCCC                TTTTTTCATAAATCT 100 51
    AHA_0884 NONE
    AHA_0885 NONE
    AHA_0886  956522 ..  956546 +  -5.6  -5.53288   CCCCTGCCAGGCTTG          CGGGCCCACC CTGGC GGTGGGCTTA          TTTTTTTCCATTCAG 100 42
      ilvB-1 NONE
    AHA_0888 NONE
        ilvH  959230 ..  959245 + -10.4  -4.72272   GTTTGTTGTCCAAAG              GGGCTC TTCG GAGCCC               TTTTTCATGGGCGCA 100 56
    AHA_0892  963788 ..  963803 + -11.8  -4.86133   CATGACTCGGACCAA              GGCGCC TCGC GGCGCC               TTTTTCATATCTATC 100 52
      dapA-1 NONE
    AHA_0897  968043 ..  968061 + -11.7  -4.84311   AAAACAGAATAGAAA             CAGGGGC CTTGT GCCCCTG             TTTTGTTATGTAAAC 100 29
        purC  969290 ..  969310 +  -9.6  -5.08601   CTGGCTGCAATGGAA            CGGGCCCC ATCAC GGGGCCCA            TTTTTGTTGCCGTGC 100 107
    AHA_0900 NONE
    AHA_0901  971663 ..  971721 +  -5.3  -3.29837   ACTTTAAGTTTGCGG CC-CGTTGCAGTAACGTGGGTGCTCT-CA TCG TGCATCGCGCCCACCTTACGTCAACGAGG TCTTCATGTTTGAAC  52 34
    AHA_0902  972172 ..  972185 +  -2.3  -3.34398   ACAATTGAATCAACT               GAGAG GCGG CTCGC                TATTTCGAAGCCCAA  45 33
    AHA_0903  972987 ..  973011 + -21.5   -4.2461   GGCCGTTGCAAATGA          CGAGGCCACCC ATG GGGTGGCCTCG          TTTGTTGGTGCGGGT 100 51
    AHA_0905  976529 ..  976542 +  -2.3  -2.80816   TGACATCGCCCGCTT               GAAGC GCTG GCTGC                TCTCGTAGATGCGAG  39 4
         dgt  978166 ..  978180 +  -4.2  -5.24129   TGCCGCGTGGAGGAA               ACAGGT AAC ACCTGC               TTTTTTATCACCCGC  85 257
    AHA_0907  978496 ..  978515 +   -15   -4.8048   CTTCTTGCTTGAAAA            CGGCAGGC GTGA GCCTGCCG             TTTTTCGTATCCGGA 100 61
    AHA_0908 NONE
    AHA_0909 NONE
    AHA_0910  986116 ..  986141 + -21.9  -5.44119   CAAGGGCCATAAAAA         CGGGGCAGGCC GCTG GGCCTGCCCCG          TTTTTTTAGCCTCGC 100 47
    AHA_0916  990413 ..  990441 + -24.7  -3.01791   TGGGCGCTGAAAACA        CAAGAGGCCCGGC AAT GCCGGGCCTCTTG        TGTTCACGACGGCAT 100 91
    AHA_0919 NONE
    AHA_0920 NONE
    AHA_0921 NONE
        mutL  998340 ..  998352 +  -3.4  -4.91109   TTTTACGTGGCTGAC                TTGC CGACT GCAA                TTTTTCTGATGGGGC  74 118
        miaA  999262 ..  999275 +  -3.8  -3.99229   GAGTGGCTTGACACT               CCTG TATAAT CAGG                TTGTTATATTGATAT  58 30
         hfq NONE
    AHA_0925 1000942 .. 1000958 +    -3  -3.48105   TTTATCAGGCATTGA              TTCGTC GATGA GATGAA              TGTTTGCTGGCTTCA  49 26
        hflK NONE
        hflC 1003094 .. 1003113 + -13.6  -4.86731   CGTAATAACACCCAA            GGGCCTGA TGAT TCAGGCCC             TTTTGTTTGCCGGCC 100 47
    AHA_0928 1003413 .. 1003442 + -18.1  -3.30159   GTGTTTGCCAGACAA       CAAAAAAGAGGCC CTTT GGCCTCTTTTTTG        TTGTCCGCCGATTGG 100 66
        rplU 1004967 .. 1004980 +  -2.3  -2.60194   CACTGAAGTCAAAAT               CACTG GCAT CAGCG                CTTAATTAGAGGAGT  38 7
        rpmA 1005283 .. 1005302 + -16.4  -5.35224   CCGCAAGGATCCGAA            GCCCCGCC AACA GGCGGGGC             TTTTGTTTTTCTGCA 100 48
        obgE 1006701 .. 1006722 + -15.9  -5.93809   CCCGGTGCTGAGAAA           CCGGAGCCT TCCC AGGCTCCGG            TTTTTTTTATGGGGA 100 73
    AHA_0933 1008440 .. 1008459 +   -10  -5.60993   TCGCGCCTTGTCACA            CGGTCAAC TTCG GTTGGCCG             TTTTTTTATGGCCGA 100 47
    AHA_0934 1010306 .. 1010319 +  -9.5  -4.72986   GTGACAACGGAAAAA               GGGCC TGCG GGCCC                TTTTTCGTCAGCGTC  95 47
    AHA_0938 1015522 .. 1015555 +  -6.5  -2.78596   TCAGGTTGGTGTCAG     GGCGCTGTCGTG-GCC CAT GGCACCCGCCGGCCCC     TATGCTGGCCCCGTC  52 190
    AHA_0939 1016112 .. 1016144 + -22.1  -4.67982   GAGCGATGCACCATA      AAAAACGGGCCCGGC AAT GCCGGGCCCGTTTTG      TTTTATTGCCTGCCA 100 44
    AHA_0946 NONE
    AHA_0947 NONE
        djlA 1025740 .. 1025786 + -15.5   -3.5511   TGAGCGCCCCTTCGT CAGC-CATA-AAAAATGCCCGTC ACT GACGGGCATTTTTGTTTGCGCTG TGTTTGTGCGTCACG 100 38
    AHA_0951 NONE
    AHA_0952 1031020 .. 1031042 + -13.4  -3.20723   GGATTACCAAGAAAA           GAAGCCGCCA CAG TGGCGGCCTC           TTGGGTTCATCAGGC  87 84
        xapA 1035920 .. 1035934 +  -2.1  -3.81488   CCAGTAAGTAGGGAA              C-GACC AGGA GGTCAG               TTATGTTTGCAGCAG  52 34
    AHA_0959 1037216 .. 1037233 + -14.1  -4.30719   CCCATCCCTTGTTCC             GGGGCGC TGCG GCGCCCC              TTTCTTATCCCGACA 100 45
      deoC-1 1038079 .. 1038100 + -12.9  -3.54543   TCATTCCCATCCAGT           GCGGCGCCC GGCG GGGCGCCCC            TTTGCACAGGTGCAT  85 42
    AHA_0961 1039168 .. 1039204 +  -5.7  -3.29263   GGTGGCGTGCATGTC   GCCCGCCTGC-ATCGG CAGCAT CCGCTTGATGGCGGGC    TTGTCCAGCGCCTGT  52 163
    AHA_0963 1041061 .. 1041082 + -15.9  -3.32022   CGCCTTGCAAACAAA           CAGAGCGCC TGAT GGCGCTCTG            TTGCTATCTGCCGCA 100 88
    AHA_0967 NONE
    AHA_0968 1045037 .. 1045058 + -17.3  -5.24531   GCCAGAATGACAAAA           CGGGCAGCC CTGG GGCTGCCCG            TTTTTTATGGACGGT 100 53
        hgpB 1049406 .. 1049421 + -11.8  -4.72272   TGCACACCACGACAA              GGGGCC TGCG GGCCCC               TTTTTCATGGCGGGG 100 45
        hcaT 1050859 .. 1050876 + -12.7  -3.69395   ATCAGCAACGAAAAA             GGGGAGC CTCG GCTCCCC              TTGTTGCATGGTGAC  86 70
    AHA_0976 1055473 .. 1055498 +  -6.2  -4.86902   CCAGCCAGCAAGATC         GGCACTTTCT GACACA AAAAAGTGCC          TTTTCTTCTCGTTTG  83 51
    AHA_0977 1058448 .. 1058470 + -13.4  -5.03314   CACCGTCAAACCCAT           CGGGGCATGC CAG GCATGCCCCC           TTTTTTCCCCATAAC 100 44
    AHA_0978 NONE
    AHA_0979 1062910 .. 1062923 +  -9.5   -4.7373   CCGCGCAATAAAAAA               GGCCC GTCA GGGCC                TTTTTCATGGGGTGA  95 49
    AHA_0982 NONE
    AHA_0983 1065592 .. 1065612 +   -14  -4.28254   ATGGTGTGATGACAA            CGGCCTGC TCAAT GCAGGCCG            TTTTGCATATTGGGG 100 46
    AHA_0993 1076583 .. 1076608 + -14.7  -5.54907   TGCTCACAATAAAAA         TGGCCCTCCGC CAGT GCGGAAGGCCA          TTTTTATTTTCTGAA 100 321
    AHA_0996 1078536 .. 1078566 +  -8.3  -2.56271   CACCTGCTGCGGTTG      CCAGCGGGCA-CCGG CCG CCGCCTG-CCGCTGG      ATCTTCTGCTGCAGG  56 358
    AHA_0999 1081238 .. 1081291 +  -5.1  -2.51186   GTAATCGGTGTGTTT CGTCCCGAGTGAGTGCCGTGCC-TCA AGG TGATGGCACGCCGGTCAGGCTGGTCG CTGTTGATGGCTTTT  46 14
        slyD 1082061 .. 1082077 + -15.1  -5.64274   CCGATGATAAAAAAA              CCCGCGC CTG GCGCGGG              TTTTTTTATGGCTGG 100 52
        fkpA 1084236 .. 1084267 +   -16  -3.35679   TAAGCGGAAAACGTT      GAAAAAACGGCTCC TTAG GGAGCCGTTTTTAC       TTGTAACTCCGCCCG 100 38
    AHA_1004 1085821 .. 1085853 + -19.2  -3.87994   CTCCCGGGGGATAAA     TG-TGCGGGGCGGCC GATT GGCCGCCCCGCAGCG      TTTGTGGCGGTCGCT 100 65
    AHA_1011 NONE
        dnaB NONE
    AHA_1013 NONE
    AHA_1014 1094646 .. 1094657 +  -7.2   -3.4178   CCCCCCGGTGCCTGG                CGCG TTCG CGCG                 TTATCATGCCCTCGT  61 137
       alr-1 1095785 .. 1095800 + -11.8  -5.70829   GCCAAACGTCAAAAA              GCCCCG TATG CGGGGC               TTTTTTTATGATGTT 100 52
    AHA_1019 1099406 .. 1099434 +  -6.2  -2.60496   AGGGTGACAAGAGTA       GAAACAT-GGTGA TCGG TCACTGATGTTTC        GTATTTCAAAAAAGG  49 3
    AHA_1020 1099963 .. 1099983 + -14.7   -4.1399   AAGCCTTCCTTTCAA            GGCTCCCTG CGA CAGGGGGCC            TTTCTGTCTGCATCG 100 51
    AHA_1021 1102444 .. 1102454 +  -3.2  -3.05384   GCTCAGGAGTTGGCT                 CGTC AAT GATG                 TTACGTAGGAAAAGA  43 17
    AHA_1022 1103651 .. 1103665 +  -5.7  -5.28942   TGATATTGGTAAAAA               GGGTT AAACC AACCC               TTTTTCTTTGGCATA  95 47
    AHA_1025 1108197 .. 1108223 + -16.7  -3.10715   AGAAGTGTGAAAAGC         GAAAACCCGGC ACTGG GCCGGGTTTTC         TTGAATGATGGTGGA 100 380
    AHA_1029 1110124 .. 1110144 + -14.7  -3.05561   CGCATTGAGATAAAA            CAGCCCGGT TAT GCCGGGCTG            TGTCGTTTCATATCT  91 33
    AHA_1041 1124074 .. 1124094 + -10.5  -3.66556   AGACGCTTGTGTTGG            TCTATAGCC GTT GGCTATGGA            TTCTATTCCCAACTT  76 45
    AHA_1042 NONE
    AHA_1043 NONE
    AHA_1044 1127546 .. 1127556 +  -6.8  -3.14931   TACCCTCCAGCGTGA                 GCAG CGC CTGC                 TTGATGGGCAATCCC  53 67
    AHA_1047 1130192 .. 1130209 + -14.1  -4.41114   CGTTGCCATGAAAAA             CGGGGCC GCGA GGCCCCG              TTTGTTATCTGCTGG 100 48
    AHA_1062 1147606 .. 1147632 +   -13  -2.52015   CGTCTGATGAAGGTG         GCTGGGTTGCTT CCC AAGCTGCCCAGC         GTTCATCGCTATCAG  75 226
    AHA_1064 NONE
    AHA_1065 1155476 .. 1155491 +  -3.2  -3.53811   AGCAATACAGGGCGC              TCGTGG GCGC CCACCA               TTTAACCAGCCTGGC  49 169
    AHA_1066 1157291 .. 1157336 +  -4.7  -4.01888   GAAAGTTGAATGCAA CTAACCGGTGATAGTGGTGAT AGTG ATCACCACTATCACCTTCAAA TTTGTGCTGTAGGCT  60 65
    AHA_1067 NONE
    AHA_1068 1160803 .. 1160830 +    -7  -3.02144   TTTATAAATACGATA        CGATGGGTTTCT TAGA AGAACCCAATCG         TATTGCCCCGCATGA  54 98
    AHA_1070 1163229 .. 1163251 +    -5  -2.55803   TGTTTATGAGAATCA           GTATGTTTTT TAG AAAAGTATAC           ATTGGTGCTGATTTT  46 48
    AHA_1074 NONE
    AHA_1075 NONE
    AHA_1076 1175385 .. 1175413 + -21.9  -2.63715   AATAATAGAATGATT        TCCCCCAGACCAT AAA ATGGTCTGGGGGA        TGGTGTCACGTGCGT 100 36
    AHA_1084 1183783 .. 1183812 +  -5.7    -4.258   ATCATCCACCATTCA       CTGGGGAG-GGGAT GGG GTCCCTTTCCCCAA       TTTGTTGGTGAGTGG  71 40
    AHA_1090 NONE
    AHA_1091 1189602 .. 1189620 +   -16  -4.86621   AATGGACGACAGAAA             GGCGACCC GAT GGGTCGCC             TTTTTCATTGGCGGT 100 57
    AHA_1094 NONE
    AHA_1095 1192100 .. 1192110 +  -6.8  -4.18702   TCTGATTTATCCCTG                 CCCT TTA AGGG                 TTTATTCAGGATTGT  70 36
    AHA_1096 1193046 .. 1193057 +  -2.2  -3.57406   TGCGGTCATAGGCAA                G-CCG GGA CGGAC                TCTTTATACTGACGC  47 64
    AHA_1097 1193664 .. 1193684 + -13.3  -3.34089   TGATCCCTCATGCAA            CAGGCTCCT GCA GGGAGCCTG            TCTTGATTGTTAACC  88 38
    AHA_1098 1194495 .. 1194514 + -12.2  -5.37593   GTGTCTTCATTTTTA            CCCATGAC TTCG GTCATGGG             TTTTTTCATTTCCGG 100 55
    AHA_1099 NONE
    AHA_1100 NONE
        phrB NONE
    AHA_1102 NONE
    AHA_1103 NONE
    AHA_1104 NONE
    AHA_1105 NONE
    AHA_1106 1202468 .. 1202502 + -15.6  -3.83346   GCTGGCGGTGAAGTG     GCAGCAGCCGGGCCCG CTG CTGGCACTGCTGCTGC     TTCATTTTCTCTTCT 100 87
    AHA_1107 NONE
    AHA_1108 NONE
    AHA_1109 1204219 .. 1204231 +  -2.7  -3.25515   GTACTCTATCAATCA                GTTAG ATC TTAAC                TATTACCTTTTGAGT  45 76
    AHA_1110 1204944 .. 1204962 + -13.1  -5.95286   TTTATCCACCCGCTT             GCCGCCC TGTTT GGGCGGC             TTTTTTGTTTTTGAT 100 209
    AHA_1111 1206783 .. 1206802 +   -15  -5.40072   ATGTTGTAAGCCTTT            GGCGAGCC TGAT GGCTCGCC             TTTTTTTAACGACCC 100 71
    AHA_1112 1207908 .. 1207932 +  -3.6  -3.64703   CTTTTCCTGAGAAGG         CTGGGCGGGTAG ACT CTGCCC-CC-AG         TTTCAGTCGAACACG  53 62
      galE-1 1209114 .. 1209133 + -16.4  -5.71712   GCATGAATAGCAAAA            CGCCCCGG CATG CCGGGGCG             TTTTTTTATGTGCCG 100 157
    AHA_1115 NONE
    AHA_1116 1210209 .. 1210228 + -13.6  -4.87626   TTATTCAGCCAGAAA            GGCCATCC GAAA GGATGGCC             TTTTTGCTATTCAAA 100 42
    AHA_1117 1211633 .. 1211652 +  -5.6  -4.27007   TTTTGCGCCATGTAT            CCGGCAGG ACGG CTTGCCTG             TTTATTAAGTCTTTG  69 134
    AHA_1118 1212363 .. 1212395 +  -6.2  -4.89567   GGCCCGTGCAAGCTT      TCTCCGACCTGTTC AGCTG GATGAGGTCGGAGC      TTTTGTGTTTTGCCA  83 115
    AHA_1119 NONE
    AHA_1120 NONE
    AHA_1121 NONE
    AHA_1122 NONE
    AHA_1123 1219940 .. 1219977 + -17.1  -4.35044   CGAAATAATACGGTG   CCAAAACCCCCATCAGC TTAT GCCGATGGGGGTTTTTG    TTTGTCTTTCAATGA 100 107
        budA 1221753 .. 1221763 +  -2.4  -3.17075   CATCCGCGCCGCCGA                 AGGC TGA GCCC                 TTCGCTTAACAAGGA  43 19
        alsS 1223497 .. 1223532 + -29.2  -3.61398   GCGGTCCGCCCAACG    CAGAGCGCCCCTTGCC AATC GGCAAGGGGCGCTCTG     TTATTGCGAAAGGAA 100 65
    AHA_1129 1226008 .. 1226025 + -12.7  -5.38047   CAAGCCATAAAAAAA             CCGGAGC AGCA GCTCCGG              TTTTTTGTATCCCTG 100 83
    AHA_1135 1232024 .. 1232038 +  -5.6  -4.18018   GATTTTGTGATAGAG               CGGGGA TTT TCCCCA               TTTTGCATGGCAGGC  65 266
        nqrA NONE
        nqrB 1234786 .. 1234796 +  -4.6  -3.73402   CATCAAGCGGAGGAT                 CGCT CGT GGCG                 TTTAATAAAGACTCT  55 10
        nqrC NONE
        nqrD NONE
      nqrE-1 NONE
        nqrF NONE
    AHA_1142 NONE
    AHA_1143 1239372 .. 1239395 + -18.2  -5.75342   GTGCCGGATAAGCGA          CGGGCTGACC TGAT GGTCAGCCCG           TTTTTTTTGCAAAAG 100 72
        dinB NONE
    AHA_1146 1243078 .. 1243105 +  -6.4  -3.01712   ATTCAGATGACAGAC        TGGGT-TAAATCG GTC CGATTTAAACCCC        TCTTCCCGCAGAGGA  52 83
        gcvA NONE
    AHA_1148 NONE
    AHA_1149 NONE
    AHA_1150 1246383 .. 1246420 + -17.1  -3.86897   GCGATGCGCCACTGA   CCACAAGGCCGACAACC CACG GGTTGTCGGCCTTGTCA    TTTCTGCGCCATCAG 100 47
    AHA_1158 1256280 .. 1256301 + -15.9  -5.38326   AGCCGCAATGAAAAG           CGCCTTGCC AATT GGCAAGGCG            TTTTTGTTTGGTTCA 100 49
    AHA_1163 NONE
    AHA_1164 1260598 .. 1260615 +  -4.9  -3.13403   CCCAAGCTGTTGCTG             TGGCATGC TGG GCAT-CCA             TGTTGGTCAAAGGGG  47 63
    AHA_1165 1261103 .. 1261132 + -14.4  -4.67048   TTTTTATCCTTTATT       CATCCCCGCTCAG CCCGT CTG-GCGGGGATG       TTTATTTTGCGATAA 100 51
        lamB 1262948 .. 1262967 +   -15  -4.86731   AAGTTAAGTTAGTCA            CTGCCCCC GTAT GGGGGCAG             TTTTGTTTCGCCGGG 100 51
    AHA_1167 1264022 .. 1264041 + -10.7   -4.7497   ATAATATTTATTTGA            GGCCTCC CTTGTT GGAGGCC             TTTTTAATCGGTAGA 100 62
        ptsG 1265880 .. 1265897 + -12.7  -4.72986   CAGAGTTGTTGAAAA             GGGAGGC ACAA GCCTCCC              TTTTTGCTGGGCGTC 100 58
        rpsB 1272213 .. 1272233 +   -14  -4.35604   GATGTAATTGGTTAG            CAGGGGCC CTTGT GGCCCCTG            TTTCTTGTCAATTCA 100 76
         tsf 1273174 .. 1273195 + -15.9  -4.03234   TTTTCCGTTTCCCCA           GACCGCGAC TTAT GTCGCGGTC            TTTATATGACCAGGA 100 51
        pyrH 1273963 .. 1273976 +  -4.5  -3.91897   CAAGTGAGACAAGCG               TGAGC TTCG GCTCG                TTTGTCCATGACGCC  58 34
         frr 1274629 .. 1274655 + -15.9  -4.84918   ACAGGTATATTACGA         GCGCCGTGTAG TGCCC CTGCACGGCGC         TTTTGTCTTTGTGGG 100 48
        uppS 1275460 .. 1275475 +  -4.6  -3.14672   AGACCGGCTAACCCC              CCTCCC AAGA GAGAGG               CTTCTTTTGCTAAAA  47 30
        cdsA 1276352 .. 1276375 +  -7.4  -2.57795   TGATGCTCAGCCTGA          T-GCGTCTGCC TGC GGCGGGCGCCA          TCCATTCGTCATACA  54 38
         dxr NONE
        ecfE NONE
    AHA_1181 1281502 .. 1281521 +   -15  -3.10796   TAAGGACGGACTCTG            CCCCCACC CAGC GGTGGGGG             TATTCAATGATGGGA  91 38
    AHA_1182 NONE
        lpxD NONE
        fabZ NONE
        lpxA 1284438 .. 1284461 +  -8.2  -3.28912   CAAAGATAACGAGCG          CGGGATCA TCCGTGCC TGATCCCG           TTCGTATCGGTATCG  62 7
        lpxB 1285593 .. 1285643 + -14.7  -4.41047   TCGGCAGATAACTTC CGGGCGGCCGCAGGGGCTG-CGCCA ACG TGACGCCAGGCCCTGCGGG-GCCTG TTTTGATTCAAGGCT 100 30
        rnhB NONE
        dnaE NONE
        accA 1290766 .. 1290792 + -23.8  -5.40072   TGTCGCACCAGGCTG         GAAGGCCCCCGC TCT GCGGGGGCCTTC         TTTTTTTGGGCGAGA 100 52
    AHA_1190 1293117 .. 1293127 +  -3.2  -3.92522   GACTCGGTGGGTCAT                 GAGT GAC GCTC                 TTTCTGCCGTTGAGC  56 478
        cadB NONE
    AHA_1192 1296990 .. 1297005 + -11.8  -4.64766   CGAGAGTGACAACAA              CGGGCC GCAA GGCCCG               TTTTTCCCATCTGGG 100 42
      pdxY-1 1298405 .. 1298415 +  -3.2  -2.71712   CATCAGGAACTTGAG                 GTCA CGA TGGC                 GTTTGGCGCCGGCCG  40 518
    AHA_1196 1302188 .. 1302207 +   -15  -5.60993   CGCTTGAATGAAGAA            GCCGCCTC GCAA GAGGCGGC             TTTTTTTATGGCCGG 100 55
    AHA_1198 1304303 .. 1304344 + -23.1  -3.35679   CCGAGGCGCTGGCCG ACAAATCACCGCAGCCGGC ATGA GCCGGCTGCGGTGATTGGG  TTATGCCTGCGCCAG 100 3
    AHA_1201 NONE
    AHA_1202 1308790 .. 1308806 + -11.5  -5.07486   AGTAACCCGAAAAAA              GCCCCGC AGT GTGGGGC              TTTTTGTTGCAGGTC 100 36
        tilS 1315622 .. 1315651 + -17.9  -2.79183   GCCAACGCGGATAAC       GGACAAGGCCGGC ATAT GCCGGCCTTGTCG        TCTCCTGCGGCTGGC  95 52
    AHA_1209 1318632 .. 1318651 +    -7   -3.3568   GGAGCAGCGCCTGCT            GGAGGGGC GTTA GCCCTCCC             TTAATGTGTGCTTAT  58 13
    AHA_1214 1323073 .. 1323103 + -25.6  -3.69434   AACGGCTGGTGTAAA       CAGAGAGGGGAGCC ACT GGCTCCCCTCTCTG       TTTGGGGTTGATTCC 100 66
    AHA_1221 NONE
    AHA_1222 1331323 .. 1331340 + -14.1   -4.7254   GCCACAGAGTGAAAA             GCCCGGC CTGC GCCGGGC              TTTTTCATGGCCCCT 100 46
    AHA_1223 NONE
    AHA_1224 1332368 .. 1332396 + -16.2  -3.06915   GCCCCGTTGCCCATA        CAAAAAAGCGCC TGACC GGCGCTTTTTTG        TTGGCTGCAATCCGT 100 51
         smc NONE
        zipA 1338600 .. 1338619 +   -10   -5.1356   CTAATGAATAAAAAG            TGCGGTAC CCAG GTGCCGCA             TTTTTATTGGTCCGC 100 55
        ligA 1340699 .. 1340727 + -21.9  -3.29144   CTTCAATCAGATAAA        CAAAGAACCCGGC ATG GCCGGGTTCTTTG        TTATGGGGGCACTGA 100 48
        nrdD 1344335 .. 1344353 +  -4.4  -3.58533   GAGAGGGAACCATCC             GAGGTGCT GTT GGCGCCGC             TTTGCACCCTTCTCC  52 73
        nrdG NONE
    AHA_1233 1345183 .. 1345202 + -13.6  -5.67967   GCCGCTTTGCCAAAA            GCCAACCC GATG GGGTTGGC             TTTTTTTATGCTGCT 100 47
    AHA_1234 1345700 .. 1345728 + -18.9  -3.82031   TTGAAGTGGAGTAAT        GAGCAACCCCGGC CAG GCCGGGGTTGCTG        TTTACTGCTGCTTGC 100 27
    AHA_1237 1347451 .. 1347463 +  -4.7  -2.72511   CTCACCCCGAGCAGG                GTGCC CAT GGCCC                GTTTGCGGGCATAGC  44 372
    AHA_1241 1350255 .. 1350265 +  -6.8  -3.50393   ATCTGATGGTCTGTT                 GCAG GGC CTGC                 TTGTATCGGCTCAAA  60 74
    AHA_1242 NONE
    AHA_1243 1353608 .. 1353618 +  -2.4  -2.73994   GGCGCCCGCACTATT                 GGTC CGC GTCC                 TGATGTTGCAAGGCT  39 12
    AHA_1244 NONE
    AHA_1245 1355933 .. 1355962 + -15.9   -3.2058   GCAGATCCATGCCAA       CAAAAGAGGGAGC CTGA GCTCCCTTTTTTG        TGTCTGTTGTTGGTG 100 55
    AHA_1247 1357829 .. 1357846 + -14.1  -3.71848   TCTAAGCAATGAAAA             GGGCGCC CGCA GGCGCCC              TTGTTGATCACCGGA  95 51
    AHA_1249 1361333 .. 1361349 +  -5.1  -3.91642   TTTCGTGGTTAAGAT              GGGTC CACAAGA GACCC              TTTGATGATTCTTTT  61 61
    AHA_1250 NONE
    AHA_1251 1363727 .. 1363743 +  -9.4  -3.41126   GAACCGATTGCTTTA              GACGGG ATGCA CCCGTC              TTCTGCCCTTTGTCC  66 39
    AHA_1252 NONE
        phoB NONE
        phoR 1366378 .. 1366395 +  -8.3  -5.46129   GTTGGCATCAAAAGA             GGGCGGC GATG GCGGCCC              TTTTTTCATTTGTTA 100 57
    AHA_1255 1367717 .. 1367734 + -14.1  -5.42198   GTTTCCTTTGCCAGA             CGGGCCC TGCG GGGCCCG              TTTTGTTTTTTGGCC 100 45
    AHA_1256 NONE
    AHA_1257 1369141 .. 1369155 +    -5  -2.94235   CCCTGCCTGCAGCGA               CAAATG TTT CGTTTG               CTTTGATCTCTCTCC  49 5
    AHA_1258 1370148 .. 1370162 +  -5.6   -2.7083   GCGCCGGCGGGGTGC               GCGGGG CCG CCTTGC               TCAATTTATGAGATC  47 0
    AHA_1259 1370948 .. 1370963 +  -6.8  -2.96216   AGGGCCTGATACGGG              CCGTGC GGCG GCATGG               TGTCTCGTCATGGGG  53 32
    AHA_1260 1371108 .. 1371128 +  -9.6  -3.31799   TCCTACGAAACAGAA            GGACGCCG CATGT CGGCGCCC            TTCTGCCAGCTTGTG  70 64
        fklB 1371887 .. 1371914 + -19.2  -5.40072   CTGGCTTGATTGATA        CAGACGGCGGCC CTCG GGTCGCCGTCTG         TTTTTTTGCGCCACG 100 46
    AHA_1262 NONE
    AHA_1263 NONE
    AHA_1264 1374463 .. 1374497 +  -4.2  -3.25823   ACTCGAACCGCCCGT     GGGCCTCCACCATG AAGCTGC CGTGATGGAAGCTC     TTGATGTAGCGGGCA  48 213
    AHA_1266 1375255 .. 1375285 + -24.2  -3.53012   CGCGCACCCTGCAAA       CAAAACGGGCAGCC ACT GGCTGCCCGTTTTG       TTTCGGGGCGGGGGA 100 41
    AHA_1268 1376901 .. 1376922 + -13.7  -3.30701   GCCCACTTCTGCAAA           GAGCCGGGC CATC GCCTGGCTC            TTGCGTTTGCTGGCG  87 97
    AHA_1269 1377947 .. 1377970 + -16.8  -3.85509   CTGGATGAAACGAAA          GAGGGGAAGC CGCG GCTTCCCCTC           TTTGCATTCTGTTGA 100 50
      agcS-1 1381263 .. 1381282 + -13.6  -4.31397   CCATCCAAACGAAAA            GCCACGAC CCGG GTCGTGGC             TTGTTTTATGGGCAT 100 53
    AHA_1274 1384918 .. 1384939 + -15.9  -3.35992   GCCGCCATACAGACA           GATGCCGCC TGAG GGCGGCATC            TTGCTTGCGCTGGGT 100 14
    AHA_1277 NONE
    AHA_1278 1389510 .. 1389527 + -11.3  -5.28176   AGGCGCAAAGCAAAA             GGGATGC CTCG GCATCCC              TTTTTTGTGCATCGC 100 52
    AHA_1283 1394811 .. 1394829 + -11.7  -5.28176   GAGCTTTGACAAAAA             TGCCGCC ATCGA GGCGGCA             TTTTTTATCCATCAA 100 48
    AHA_1284 1396390 .. 1396407 + -12.7  -5.06414   GTTCCCACAGCAAAA             GAGCGCC GCAA GGCGCTC              TTTTTGTTGGGGAGG 100 61
    AHA_1287 NONE
    AHA_1288 NONE
    AHA_1289 1403760 .. 1403780 +   -14  -4.27259   AACCCGCACTTTTCA            GGCGAGCC CCGCT GGCTCGCC            TTTTCCGTATCTATC 100 51
    AHA_1290 1406316 .. 1406333 + -12.7  -4.72272   ATAGAAATAAAAAAA             GGCGACC GGAT GGTCGCC              TTTTTAATAGCCAAC 100 61
    AHA_1293 1409466 .. 1409483 +  -3.3  -3.64703   GGCACTGGAGATCTG             CTTGGCG GGAA TGCCCAG              TTTGCGTGAGAGACG  51 261
    AHA_1295 NONE
    AHA_1296 NONE
    AHA_1298 1411749 .. 1411767 +    -3  -3.72576   TCAGCAGCAGCGGTG             CGAGCC GCAAACA GGCGCG             TTTCATGGGCGGGCC  54 49
    AHA_1300 1413514 .. 1413527 +  -6.7  -3.93262   CGCTGCCGCGCAAGC               CAAGC GGGC GCTTG                TTTGCTATCTTGGCG  68 140
        ruvC 1414368 .. 1414383 +  -5.4  -4.11751   AGTTAATCAACGACT              TGTGAC GCAA GTCACG               TTTTCAGGCCTTCAT  65 208
    AHA_1302 1415224 .. 1415239 + -10.4  -5.42514   AAAGTGTGGTATCGA              CACGCC CCCG GGCGTG               TTTTTTCGTTTCTGG 100 55
    AHA_1306 1420015 .. 1420034 +  -9.2  -4.22652   CGTTGAGCCGATAGA            CCGGCTGG GTCT CCAGCCGC             TTTTCCATGCTCTGC  79 137
         cls 1422049 .. 1422062 +  -5.2  -3.05384   ACTTAATTGCGGCAG               GCGC CGAATT GCGC                TTGCCTAGCCCCAAG  50 45
    AHA_1309 1423411 .. 1423440 + -19.5  -4.18018   GCTTTAGTGCACATA       CAACAAAGGCTCC CGTG GGAGCCTTTGTTG        TTTTCAGTGGCCGGG 100 49
        ribB 1425887 .. 1425904 + -11.3  -5.81412   ATCCATGCGAAAAAA             TGGCGCA GTTA TGCGCCA              TTTTTTTTGCCTGAA 100 507
    AHA_1314 1428399 .. 1428416 + -12.7    -5.252   CCAACCTCACTTGAA             CCGGGCT CGAC AGCCCGG              TTTTTTATGGCCGTC 100 80
    AHA_1315 1429472 .. 1429500 + -19.7  -5.00616   GAAGCGGGACGACGA        CAAGGGGCATGCC GAT GGTATGCCCCTTG        TTTTTTGGGGAGCGC 100 48
    AHA_1316 1430486 .. 1430507 + -14.5  -5.63504   TCGTATTGAAAAAAA           CAGGCTCAC CTCG GTGAGCCTG            TTTTTTTATGGCGTT 100 71
    AHA_1319 1433050 .. 1433074 + -15.8  -5.18355   TCCGCCATCTTCAAG          GCCCAAGCTG CCAGC CAGCTTGGGC          TTTTTCGTTTTTGCG 100 34
    AHA_1322 NONE
    AHA_1323 1439530 .. 1439556 + -18.1  -4.27886   CGAGATCAAATATCA         GGCCCAAGCTG CTAGC CAGCTTGGGCC         TTTCTCTATTTGCAC 100 136
      fdhD-1 NONE
    AHA_1342 1457901 .. 1457935 + -17.3  -3.08464   CCGCACATCCTATAA     ACAACAACGCCGCAT AAGAG ATGCGGCGTTGTTGA     TTGCGTGACTGGTGC 100 98
    AHA_1345 NONE
    AHA_1346 1462368 .. 1462384 + -13.7  -6.08342   CTCCTGAACCTGAAA              CCGGCCA TCA TGGCCGG              TTTTTTTGTTTGTTA 100 52
    AHA_1347 NONE
    AHA_1348 1466661 .. 1466678 + -12.7  -4.72986   TTCGCCATAAAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTGGTGCCGGTG 100 50
         glk 1470642 .. 1470658 + -10.8  -5.64274   GCCTGAACTGTTTCA              CCGGCC CTCGC GGCCGG              TTTTTTTATGCCTGC 100 190
    AHA_1357 NONE
        rtxC NONE
    AHA_1359 1493878 .. 1493895 + -11.3  -5.60993   CCCGTTAGGTAAAAA             CCTGCTC TTCG GAGCAGG              TTTTTTTATGGCAAG 100 57
    AHA_1360 1494749 .. 1494771 + -13.5  -5.45652   GCAATCAATAAAAAA           GCCAGTCAG GGTCA CTGACTGGC           TTTTTTGTTGGCGCT 100 79
    AHA_1362 1497470 .. 1497496 + -16.5  -2.67441   ATCAGCAATACCGAG         AGCCCGCCGCC AGCTA GGCGGCGGGCC         TGGTGTCATGACTTG  89 9
    AHA_1363 1498504 .. 1498549 + -22.7  -2.52896   TAGTCACCCGCTTTC CGGCCTGTTCCGTCGGCCCGCA TCT TGCTGGCTGACGGGA-AGGCCG TCACTTGGCAAATAA 100 38
        fliE NONE
        fliF NONE
        fliG NONE
        fliH 1502708 .. 1502739 + -12.9   -4.0492   TGCCCGCGGCTAAGG      GCGTGCGGGCCGC CAGGGT GCGGCCCGTCTGC       TTTCTCTACCCATTC  93 28
        fliI NONE
        fliJ 1504779 .. 1504793 +  -3.4  -4.10161   GGGGCCCTGCAGAGC               GACGGC AAG GTCGGC               TTTTCCGAGGTGATG  58 228
    AHA_1370 NONE
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP NONE
        fliQ 1510235 .. 1510256 +  -5.8  -3.57731   GGTGGTGGGATGATG           GGCCAGCTC GAGCA GGGC-GGCC           TTCTGTGCTCGTTGC  57 28
        fliR 1511179 .. 1511199 +  -6.1  -3.06501   ACTGAACAACGGCGC            TCCGGCG GGTTTGA TGCCGGA            TTGCCTCGACCTGTG  52 113
        flhB 1512395 .. 1512409 +  -3.6   -3.2505   AAAATCATTGTATTT               CAATAT CTT GTATTG               TTGGCTTGATGTTTG  47 64
        flhA NONE
        flhF NONE
    AHA_1381 NONE
        fliA 1517675 .. 1517688 +  -9.5  -3.34517   GCATCATGTAAGTGA               GCCGC TCTG GCGGC                TATTTAGGAGGGAAT  70 107
        cheY NONE
        cheZ NONE
      cheA-2 NONE
      cheB-2 NONE
        motA NONE
    AHA_1388 NONE
    AHA_1389 NONE
    AHA_1390 NONE
      cheW-2 1526060 .. 1526077 +  -2.7  -2.78596   TCTCCGATGAAGAGT             GGGAA GATATCGG TTCCC              TCTGATAGGAAGATA  41 3
    AHA_1392 1526492 .. 1526515 + -13.2  -4.27617   GCCGCTCATGAATGT          TCGGGAAGGC GTCC GCCTTCCTGA           TTTTCCTCCCCTCTC 100 30
        ccmA 1527266 .. 1527277 +  -2.2  -3.52073   TCTCTCACGCCCTTG                CTGC AGGA GTAG                 TTCTGATGTTGCGCG  47 14
        ccmB 1527929 .. 1527943 +  -7.1  -2.52464   TGGCGGTCTCGGCGG               CGCTG CGGGT CAGCG               TGAATTGACGAAAGC  51 3
        ccmC NONE
    AHA_1396 NONE
        ccmE NONE
      ccmF-1 NONE
        dsbE NONE
    AHA_1400 NONE
    AHA_1401 1533886 .. 1533918 + -10.4  -2.92246   GCCCTCTAATACGCC      TTTGGCCCGGCCCC TCGAT GGGGCCGGGCTGCC      TATAATTCAGATTAA  68 32
        vacJ 1534806 .. 1534821 + -11.8  -4.85129   GAGTAACGCAACAAA              GGCGCC TGCG GGCGCC               TTTTTCGTCTCTGCT 100 59
    AHA_1404 1536139 .. 1536157 +   -16  -5.63517   TGCATCATGCAAAAA             GGGGAGCC GCT GGCTCCCC             TTTTTTATTTCACAA 100 50
    AHA_1406 NONE
    AHA_1407 1539955 .. 1539976 + -11.5  -5.00616   AAGGGCATACCAAGG           GAGGGAGGC GTGA GCCTCCCCC            TTTTTTGCAGCCGCC 100 65
        pdxH NONE
    AHA_1409 NONE
    AHA_1410 NONE
    AHA_1411 1543564 .. 1543579 + -11.8   -5.4492   TATATCTGTGAAAAA              GGCGCC CTCG GGCGCC               TTTTTTATCTCTGTC 100 47
    AHA_1425 1559924 .. 1559937 +  -3.7  -3.05597   GCCACCCAGCGAACT               CAGGC CGAT GCCCG                CTTTTGCAAGCTGGG  45 52
        malX 1562849 .. 1562863 + -12.8  -3.85518   GTTAACGTACGTCGG               GGGGGC CAT GCCCCC               TTGTTCATTGCTGTT  90 52
    AHA_1428 1564103 .. 1564122 + -16.4  -3.45571   TGGCCAGATAGCGCG            CCGCCGCC CTCG GGCGGCGG             TTGCTATTTCGAGGC 100 30
    AHA_1432 1568251 .. 1568271 + -15.4  -5.59534   CGGCAGAATGTAAAA            CCCCCGCC AGCAC GGCGGGGG            TTTTTTATTGTGGTT 100 77
    AHA_1435 1571234 .. 1571271 +  -2.5  -2.73364   CGGGATAAGCAGGGA   TG-CTGCTGGAGCCTGTC CGA GTCAGGTGCCGGCGGGCC   TGCTTCGGATCCGGA  39 33
         icd 1572705 .. 1572723 + -13.1  -5.64274   CACTGAAATGCAAAA             CCGGCGC CATGA GCGCCGG             TTTTTTTATGGGTGA 100 48
        dsdC 1575900 .. 1575918 +    -3  -4.67357   ATGAAGGAATAGCCA             ACTCACTG ATC CTGTGAGA             TTATTTTTATTCCTT  67 55
    AHA_1440 NONE
    AHA_1441 1577665 .. 1577688 + -18.2  -3.56594   TGCCGGATATAAAAA          GGGCCACCTC TTGC GAGGTGGCCC           TTTCCAAACGTTTGG 100 67
    AHA_1444 NONE
    AHA_1445 1579684 .. 1579697 +  -9.5  -5.15634   ACCGCATATAAAAAA               GGCGC CTTG GCGCC                TTTTTTGATCCCGTC 100 97
    AHA_1450 NONE
    AHA_1451 NONE
    AHA_1452 NONE
    AHA_1453 NONE
    AHA_1454 NONE
    AHA_1455 NONE
    AHA_1456 1590914 .. 1590924 +  -2.4  -2.78463   CTGCATGGCGGGCGA                 CGGG GAG CCAG                 TCTCATGAACACGCT  39 7
    AHA_1457 NONE
    AHA_1458 NONE
    AHA_1459 NONE
    AHA_1460 NONE
    AHA_1461 NONE
    AHA_1462 1595860 .. 1595883 + -12.4  -2.88999   CATATGGTGCAAAAA          AGAGGGGCCA AGTT TGGCCCCTCA           TCTCATCTGTCGAGC  75 44
         udp 1598226 .. 1598258 +   -12  -3.88583   CCACACCGAGTGGGG     GGTGGGGGCCGTTGC GAAA GCG-CGGCCCCTATC      TTTATCCGCCGTTTA  86 46
        rihA 1600155 .. 1600165 +  -4.6  -3.64703   ATCTGCTGGTCACGC                 GGCT GCG GGCC                 TTTGACTGAACGCAG  55 6
    AHA_1467 1600722 .. 1600750 + -20.4  -4.42464   GCTGACAAGATACAA        GAAGGGCCAGCC TTGTC GGCTGGCCCTTC        TTTATTTGGCGGATT 100 68
    AHA_1471 1604303 .. 1604319 + -15.1  -4.77438   TGAACCTGCCGAAAA              GCCCCGC CCT GCGGGGC              TTTTTCGTGATGCCT 100 59
    AHA_1472 1605368 .. 1605389 + -14.4   -4.8622   GCCTCATAAAGAAAA           GCCCCGGG GTAATG CCCGGGGC            TTTTTCGTTGGCGGC 100 86
    AHA_1482 1615522 .. 1615549 + -14.1  -3.90588   TGTTTATGTAACCGG        GCGGCGGACGG CACGGT CCGTCCGCCCC         TTTCATTCGGCCGTC 100 30
    AHA_1483 1616765 .. 1616784 +   -15  -5.43414   CAAAGAAAAGCAAAA            CGGGAGGC CATC GCCTCCCG             TTTTTTATCTGTCCT 100 49
        bioB NONE
        bioF 1625987 .. 1626005 +  -8.8  -4.08767   TGACGAGAGAGGGGG             CGCCCATG GTG CATGAGCG             TTTTCAGGCGGTCGA  80 10
        bioC 1626847 .. 1626862 +    -6  -3.03441   CCGGCCATTGCGAGC              CCGGGC AGCG GCCCCG               TATTGAGGAGTCATC  52 77
        bioD 1627582 .. 1627594 +    -2  -3.35798   TTCAGCGAACATTCA                TAGA AACTG TCTA                TTATGCGTGACAGGT  45 49
        htpX 1628564 .. 1628583 +   -15  -4.61873   CCGTACCAATGAAAA            CGGCTGCC CTCG GGCAGCCG             TTTTGCTTTGTGCGC 100 46
    AHA_1496 NONE
      nifJ-1 1637992 .. 1638008 + -15.1  -4.88067   TCTGCATAAAACGAA              GCGGGCC ACT GGCCCGC              TTTTTATCAATAGAT 100 54
        cysM 1646209 .. 1646243 +  -7.2  -2.90219   AGCGTGATGATTAAC     GTGATATGTATCAACA GCT TGCTGATACATTGCAC     TGTGTACCCCTTGTA  56 52
    AHA_1505 1646633 .. 1646655 + -20.6  -3.02096   ATCAGCTGGTAACAG           GAGGCCCCGC GAT GCGGGGCCTC           TGTCTGATTACTCCC 100 29
    AHA_1510 1650930 .. 1650956 + -22.4  -4.38712   CCGTTGAATCAACAA         CAACAGGGCCCG TCG CGGGCCCTGTTG         TTTTATGGCGGTCAC 100 46
    AHA_1512 1654168 .. 1654185 + -14.1  -5.28778   CGGCCAAGACAACAA             CGCCGGC AAGT GCCGGCG              TTTTTTATGGATGGT 100 56
    AHA_1514 1655890 .. 1655907 + -11.3  -5.65177   CCGGATAGTGAAAAA             CCGATGC CCAG GCATCGG              TTTTTTTATGGCTGT 100 54
        aspS 1664516 .. 1664533 + -12.7  -3.78409   GTTACCGGCAGCAAA             GGCCGCA GCAA TGCGGCC              TTTCCCTTGCATTAG  90 44
    AHA_1522 1665384 .. 1665401 + -12.7  -5.22006   TCGCCCCCGTTAAAA             CGGCAGC CTCG GCTGCCG              TTTTTCTTGTGATGG 100 76
    AHA_1523 1667426 .. 1667444 +   -16  -5.63517   ATCTATCAATAAAAA             CGGCAGCC ACT GGCTGCCG             TTTTTTATTTCGCAA 100 219
        nagE NONE
    AHA_1528 1675199 .. 1675237 + -20.5  -3.14026   GGGTCGCAAGACCCG   CCTTTCCCAAGCCCGAT AACGC ATCGGCCTTGGGAAAGG   TTGACTGTGAGTGTG 100 66
        glnS 1677181 .. 1677198 + -12.7  -4.71426   CTGATAACAGAAGAG             GGCAGGG GAGA CCCTGCC              TTTTCTTGATCACGA 100 37
    AHA_1531 1678471 .. 1678492 + -15.9  -3.28924   TGAGCCAGAAAACAA           CAAGGGCCC CGCG GGGCCCTTG            TTGTCAGAGAGGCTG 100 38
    AHA_1536 1681232 .. 1681242 +  -3.2  -2.76737   AGGTGATCGCCCGGG                 TGTG CGG CGCA                 ATTTAACGCTTCATC  41 9
         pgm 1682973 .. 1683019 + -17.5  -3.17194   TCGACTCAAGCACCC GCGGAATATGAAAGAGGAGCC TTGAT GGCTCCTCTTTTTTATTGCGC TTGAGTTGGAGCCGT 100 43
    AHA_1539 1684709 .. 1684748 +  -2.9  -2.80816   TGGCGCAGGGCTGCG CTGACCCGCAGCTCGACTTC GGC GAGGT-G-GCTGCTGG-CGG TCTCCTGAATGAGCG  41 234
    AHA_1541 1685935 .. 1685953 + -17.4  -5.24129   GTGGATGGTTGGCAA             GGCGGCCC TGA GGGCCGCC             TTTTTTATCCGGCCG 100 67
    AHA_1550 1695628 .. 1695646 +    -3  -4.46212   TCTCGGTCTTGACCA             GGATGTGC TGG GCACAGGC             TTTTCTCATCGGGAC  67 291
    AHA_1553 1698500 .. 1698521 +  -2.9  -3.54129   CTCTTCTGTTCTCCT           GA-CCGGCCG CTG CGGCTGCATC           TTTCGCGGGGGTCTG  49 64
    AHA_1554 1702317 .. 1702336 +   -15   -5.1356   AGGAAGAGACAAAAA            CGGGAGGC ACAA GCCTCCCG             TTTTTATTGGTGGCA 100 46
    AHA_1557 1703333 .. 1703349 + -11.5  -4.14257   TTCGGGCAGCAAAAA              GGCGGGG AGA TCCCGCC              TTTGTCGTTGTTGGC  88 59
    AHA_1559 1706643 .. 1706666 +    -8   -3.1355   AATGAGGGAATATGA          CACCACCGCC AACG GGCGGTGGCA           TTGCCTCTCAATGGA  60 61
         slt 1708606 .. 1708642 +  -4.5  -3.05463   CTGAGTCACGCTTAT  TGAGA--C-GGCTGCCGC CCTG GCGGCAGCCGGATTCCCA   TTCCCTCCCCAAAAT  47 23
    AHA_1561 1710003 .. 1710021 +   -11  -6.06723   CTTCGTTACTTTCGA             CGGTCATC ATG GATGGCCG             TTTTTTTTTGCCAGG 100 242
    AHA_1562 1710832 .. 1710870 +  -3.5  -2.71268   CGGCGCACTGGTTTG   CCGAGCTGGCGGCCCGG GGTCA CTGAGCATCCCGCCCGG   TGCTATATAGTGGGG  43 0
    AHA_1563 1711540 .. 1711553 +  -6.7  -3.17714   CTGATCTGATAGACG               GTGGA AAGC TCCAC                TTGATGACAATTTCC  53 183
    AHA_1565 1712613 .. 1712633 + -13.3    -5.626   TTCCAGATAAAAAAA            TACCCCGCT TTT GGCGGGGTA            TTTTTTTATGAAGTG 100 68
    AHA_1569 1716003 .. 1716021 +    -3  -4.44667   TCTTGACCGGCTGAC             GGCTGGCT GTC ACCCATCC             TTTCTTCTTCCAGCC  67 195
        dnaQ NONE
    AHA_1571 1718355 .. 1718372 +  -9.8  -4.63048   CAACCGCACGAAAAA             GCCGCC CATCGA GGCGGC              TTTGTTATTTATGGG  91 46
        gmhA 1723424 .. 1723434 +  -6.8  -3.01712   CCTTGTCTGGCCGTG                 TCCC GGC GGGA                 TCTTGCGCAAGCGGC  54 70
    AHA_1575 1724328 .. 1724349 + -14.5  -3.61398   AGAGATAAAAAAATA           CCAGGGTAG AATC CTACCCTGG            TTCTTCGCAGCAGCC  95 55
    AHA_1576 1725228 .. 1725238 +  -6.8  -4.07568   GCAGGCTGAGCTGGC                 TGGC CGG GCCA                 TTTTCGGCGACCAGA  67 298
    AHA_1578 1727331 .. 1727348 +    -2  -3.30124   GAGGCCAAATACCGG             CAGGAGT CGCAA AC-CCTG             TTGTGCGGGGTGGCG  43 140
    AHA_1579 1729338 .. 1729360 + -12.1  -2.77013   CGCAGCTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA  72 32
        moaA 1733841 .. 1733864 +    -6  -4.21772   TAAGCAATCCTCAAA          TGGGGGTA TTTTGCCT TGCCCCCA           TTGTTCTTTATTGCG  67 75
        napF NONE
        napD NONE
        napA NONE
    AHA_1587 1738225 .. 1738235 +  -3.2  -2.57132   CCCGCAAACCGGAGG                 GGCT ATG AGTC                 GTTATCCGGGAGCCG  40 18
    AHA_1588 NONE
        napB NONE
    AHA_1590 1740174 .. 1740195 + -17.3  -3.36273   TAAGCCCATCTGATG           CAGGCCGGG TTCG CCCGGCCTG            TTCATATTCCGCCCG 100 38
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 1742190 .. 1742223 +  -5.2  -4.07568   AAGCTTGACCTGTTC     AAGGGGGC-TGGCTC ATCGG GAGCCGCGGCCCCTG     TTTTCGGGGCCACCC  65 33
        modA 1743041 .. 1743065 +   -10  -4.13945   ACACCTACCTGATGA         GT-GGCCGGCC CTCG GGTCGGCCCAC          TTTTGCGATAAGGAT  83 53
        modB NONE
        modC NONE
    AHA_1598 1745865 .. 1745883 + -12.4   -5.4505   TGACAGATAAAAAAA             GCCGACCT CAT GGGTCGGC             TTTTTTGTTGGCGAA 100 59
        folE 1748870 .. 1748889 + -11.4  -2.82015   TGATCTGCCCGGAGA            CGTGCCGC CGCT GCGGCATG             TCTCCTCGCTCTCCC  69 38
    AHA_1602 1750954 .. 1750975 + -14.4  -4.15703   AGGCAAATAACAGAA           GGCCCCGC CAATCA GCGGGGCC            TTGTTGTTTCTGGCA 100 55
    AHA_1605 1753651 .. 1753663 +  -4.7  -3.61398   GCAGGCCGCCCGGGT                CAGGG CCA CCCCG                TTGTTGGCCCGCAGC  55 288
    AHA_1607 NONE
    AHA_1608 1755854 .. 1755878 + -18.7  -3.74658   TTATCTGGACACACA          CAGAACCCGGT CTG ACCGGGTTCTG          TTTGCCTGCTTGTTT 100 149
    AHA_1609 NONE
    AHA_1610 1757408 .. 1757433 + -19.1  -2.84298   AGCATCAATGACAAA         GAGAGGGAGGC ACAG GCCTCCCTCTC          TCGTTGTGGCGTCTG 100 46
        speA 1763564 .. 1763581 + -14.1  -5.07486   GCGGGCATAAAAAAA             CGGCGCC TGCG GGCGCCG              TTTTTGTTGCGCATG 100 80
    AHA_1614 1764000 .. 1764032 + -15.5  -3.66365   CATTGCCAGCATTGC      CTGCGGCCATCGGCA GCT TGCCGCTGGCCGCGC      TTCATTTATCTACTC 100 45
    AHA_1618 1768717 .. 1768733 +  -3.7  -2.85437   AGGGTAGAAGTGGAA              GCGAT CGCTCAC ATCGC              TGGTTAATGTTGATA  43 2
    AHA_1619 1770081 .. 1770093 +  -6.9  -4.44974   CTGCCACCCTTGCCC                GGGTC GGC GGCCC                TTTTATAAGGTTTCA  75 54
    AHA_1620 1770789 .. 1770806 + -11.3  -5.55855   GCCAGCCAGCATTAA             CGGGTCA GCAT TGACCCG              TTTTGTTTTTTTACG 100 50
    AHA_1621 1771509 .. 1771529 + -18.3  -5.60993   TGACCCCGACGAAAA            CGGCTCGCC ATT GGCGAGCCG            TTTTTTTATGAGCGC 100 38
    AHA_1623 1772984 .. 1772999 +  -2.5  -3.36569   CCTTCACTCAGCTAG              TGGCT TTGCTC GGCCA               TCTTTGCGCCATTCG  45 53
    AHA_1624 1773610 .. 1773620 +  -6.8  -3.06583   AAGGGCTCTAGAAGG                 GAGC CTC GCTC                 TCTTGCGCATCTTGT  54 157
    AHA_1627 NONE
    AHA_1628 1778417 .. 1778435 +   -16  -5.45802   GTTGACATTAAAAAA             CACCGGCC ACA GGCCGGTG             TTTTTGTTTTGGCGA 100 59
    AHA_1631 1781149 .. 1781165 +  -2.1  -2.71011   CGCTGAGCGGTGAGG              GGACGCA GGC TGGGGCC              TGCTTAGCGCACCCT  39 28
    AHA_1637 1784859 .. 1784875 + -15.1  -3.94067   AAGGATTGTCGATGA              GGCCCCG TTA CGGGGCC              TTGTTGTGTCTGGTC 100 55
    AHA_1638 1785517 .. 1785533 + -10.1  -4.49756   ATTTTGCAAGGAACA              GGCCTCA TCA TGGGGCC              TTTTGGTCTTTGGCG  88 59
    AHA_1640 NONE
      cydB-1 NONE
    AHA_1642 1789940 .. 1789959 + -13.6  -4.68994   ACGCAGCCATGAAAA            GGCCGACA CAGG TGTCGGCC             TTTTTGCATCCTGCT 100 42
    AHA_1647 1794803 .. 1794836 +  -9.5  -4.62069   CGGGGCGGCGCTAAA     AAAGAGAGGCCGACA TTGC TGTCGGCCTCTCACG      TTTTTCAGCTCAAGG  91 126
        glpT 1799169 .. 1799189 + -11.1  -5.23316   AGGTAAACTCCCCAA            GGCCCCG CATCTGC CGGGGCC            TTTTTTCGTCTCATC 100 77
        glpR 1800003 .. 1800022 + -10.6  -2.80091   ACCCGTTCCAGCACC            AGGCCGCC ATCG GGCGGCCG             CTTCGTTTTCAGCCT  66 51
        glpD NONE
        glpQ 1802996 .. 1803014 + -13.1  -5.30686   AACACGGGAATGCAA             GCGGGGC CAGGT GCCCCGC             TTTTTTATGCCTGTT 100 53
    AHA_1654 1804394 .. 1804426 + -16.3  -3.19522   CACTGATTGAACAAG      CGAGGTGTCATCGGC CGA GGCGGTGGCACCTCG      TTGCCTCTTGAATCA 100 59
        tyrA 1805631 .. 1805658 +   -20   -4.4648   TGAGAATAACCAAAA        GCAAAAGGGGCC TGTC GGCCCCTTTTGC         TTTTGTACTCCCGCT 100 38
    AHA_1666 1820200 .. 1820223 + -12.5  -5.27335   CAGTTTTGGCAAAAA          GACACCGCA CTTCGC TGCGGTGTC           TTTTTATTTAACGGG 100 55
        malE 1821759 .. 1821783 + -11.3  -2.91239   GTAAGCACGCACTAC          CCGGGAGGCCG CAA CGGCCTCCCAC          TCTCTCAAATCTCTC  71 37
        malF NONE
        malG 1824380 .. 1824417 +  -4.7  -2.73159   GCGTGAAAGGTTAAG   GTTCATGGCCGGGGGAG CTGA TTCCCCCCGCCATCACG    ATTTGCAAAGATTCA  45 27
    AHA_1670 1825634 .. 1825651 + -12.7  -5.10461   ATTCAATGCCTTTTT             GCCGGTC GCAA GACCGGC              TTTTTATTGCCTGCC 100 75
    AHA_1672 1827459 .. 1827485 + -13.8  -4.31293   CTGACGATGATCGTG         AAAAAGGGAGCC GAG GGCTCCCTTTTG         TTTGTTCGTATCTCA 100 56
    AHA_1676 1831289 .. 1831320 + -24.6  -4.46212   AGCGGCTCTCATTCA      CGACAAGGGCGCAC CTCG GTGCGCCCTTGTCG       TTTTATGATGACGAA 100 47
      arsC-1 NONE
    AHA_1679 1832704 .. 1832720 +  -9.4  -5.65177   CCTGCTCTGTGCAAA              CCGGAC CTTGA GTCCGG              TTTTTTTATGGATGT 100 57
    AHA_1680 1834050 .. 1834065 + -11.8  -5.24129   GAAGCGTTGGTAGAA              GGCCCC TCGC GGGGCC               TTTTTTATGGCCGCA 100 42
        iadA 1836048 .. 1836079 + -24.6  -3.63694   TTCCCCTCTTTTAAA      CGACAAGCCCGGCA GCAG TGCCGGGCTTGTCG       TTGTTGGCGATGGGT 100 76
    AHA_1684 NONE
    AHA_1685 1839235 .. 1839271 + -15.2  -2.61274   CTAGTCTGTAGTCAT   CGGGCCCGTTGTCTCTC GCAA GGGAG-CGATGGGCCCG    CTTAGTTGCAATGGA  83 107
    AHA_1686 NONE
    AHA_1687 1840809 .. 1840824 + -11.8  -5.28176   AACGCCATAAAAAAA              GCCCGC AATT GCGGGC               TTTTTTGTCGCTGCG 100 40
    AHA_1691 1847241 .. 1847262 + -10.1  -3.12327   CCGAGCCGCAAGAGA           GCGCTGACCC CAG GGG-CGGCGC           TGTTGCATCTGGCGG  67 46
    AHA_1692 NONE
        pbpC 1854684 .. 1854700 +  -5.8  -3.63627   TGGAGAATCCCTCCT              GAGGGG AGGCG CCTCTC              TTTGGAGTGTCAGAA  60 24
        thiI 1857401 .. 1857418 +  -8.4  -5.96894   GCATGCATAAAAAAA             TCCGGC CAATGA GCCGGA              TTTTTTTATTTCACT 100 53
    AHA_1698 1860081 .. 1860101 + -11.1  -5.19328   AGCGTATGCTCGTTT            TAGGCCGGA TTT TCCGGCCTC            TTTTTATTGTGCCGT 100 203
    AHA_1699 NONE
    AHA_1700 1861848 .. 1861861 +  -2.3   -2.8547   ACGCGCCGGGTTGCT               GCTCG ATAA CGAGA                TCTGATATGAAAACT  39 7
        fliD NONE
        fliS 1864127 .. 1864141 + -11.4  -3.15503   AAAAAGAACAGGAGG               CCGCCA TGC TGGCGG               TGTTGCCTGTTCGCC  72 402
    AHA_1703 1866178 .. 1866195 + -12.7  -5.88565   CTGCTGAATAAAAAA             CACCGGC GCTT GCCGGTG              TTTTTTTATTGTGAA 100 62
    AHA_1709 1872635 .. 1872664 + -20.9  -3.62597   GTATTGGCAGGCACC       CAAACAACCCGGC TCTG GCCGGGTTGTTTG        TTATTGGCCAGTGGC 100 80
    AHA_1711 1874532 .. 1874571 + -18.8  -3.62096   GTCCGGGCTGTTCAA  GCGGCACAATATTTGTCA TAAC TGACCAGTATTGTGCCGC   TTTGCCATGCTGGCG 100 57
    AHA_1712 1875478 .. 1875498 +    -6  -3.34501   AAGCCTAGGGAGTGT            CCTGCTCC CGGCC GGTGCGGG            TTCTCCGCCTTGTAT  56 148
        emrD 1876824 .. 1876841 +  -9.8  -5.24129   GAGCGCTAGAAAAGA             CCCGCC CAAGCC GGCGGG              TTTTTTATGGGCCGC 100 44
    AHA_1715 1878265 .. 1878282 + -12.7  -4.66163   GTCGAACCCTAAAAA             GAGCGCC TGGT GGCGCTC              TTTTTACATCGGGAT 100 45
        ubiH NONE
    AHA_1717 1881081 .. 1881108 + -12.8  -3.83205   AAACTAATGTGATGA        GGCTGATGACCCG GTT TGGG-CATCAGCC        TTTAATCTGGGCGCT  90 135
        gcvT 1882587 .. 1882602 +  -3.2  -2.87132   CCCTTCGCCAGACCC              CCTTGC CCCG GCAACG               TCTGTCGAACGCGCC  42 65
        gcvH 1883048 .. 1883075 + -14.1  -3.51924   CGAAGAGTAATGCCC        CCGGGCCCTGC CAATGC GCAGGGCCCGC         TTGTATAGGTGCCCG  95 31
        gcvP 1886213 .. 1886232 + -13.6  -5.58522   GTTGGAAACCAACAA            TGCCCTGC AATC GCAGGGCA             TTTTTCTTTTGTGTC 100 67
    AHA_1722 1887790 .. 1887802 +    -2  -2.71644   CAGTACCAAGCCGCC                TTGA TCATT TCAA                CTATTCTTGTATAGT  39 53
    AHA_1723 NONE
    AHA_1724 1888656 .. 1888670 +  -4.2  -2.80493   TGCTGCTAGGCGCCA               TCGCCA GGT TGGCAA               GTTCTCTGTTCGGCC  45 32
    AHA_1725 NONE
        arsB NONE
      arsC-2 1892113 .. 1892129 +  -2.9  -3.18199   GGCGATGATGCCGGG              CCGCC ATGAGGG GGTGG              TTGCCTTGCCGGTTG  45 60
    AHA_1728 1893445 .. 1893456 +  -2.2   -4.2679   GGCGGGAAGCAGACG                CTAC CATG GTGG                 TTTTGCTCACGATTG  60 502
    AHA_1730 1894809 .. 1894827 + -14.6  -4.89852   CGTACCAATAAAAAA             GCCGACTC AGT GAGTCGGC             TTTTTGTCCATCTGG 100 51
        queA 1899463 .. 1899485 + -12.7  -3.85817   TCGTCACCCGTCGCC          GGGCGCAGGC ATAA GCC-GCGCCC           TTTATACCGGGCCCT  90 12
         tgt NONE
        yajC NONE
      secD-1 NONE
      secF-1 1903906 .. 1903923 + -14.1  -4.27117   TGCCGTAAATGACAA             GGGCGCC GCGA GGCGCCC              TTTCTCTTATCGCCC 100 33
    AHA_1739 1904478 .. 1904496 +  -8.9  -3.17051   GTCAGGAAAGGGATT             GGATACC TCCTT GGTATCC             TGTTGCTGCTCCCCA  65 137
    AHA_1740 1905440 .. 1905456 +  -9.4   -4.8048   GAATGATGTAGAAAA              GGCCTC ATTGC GAGGCC              TTTTTGCTGTCCGGG  93 61
    AHA_1744 1908296 .. 1908309 +  -2.3  -3.72695   TCGTAGAGCCACTCC               GGCTG AAAC CAGCG                TTTGGTCGGGAAGAT  52 189
    AHA_1745 1909402 .. 1909445 +  -7.6  -2.89191   GACCGCAGGATTAAA CCCGACTGGATTACTCAA CCATATAC TTGACTGATTTAGTCGGG TATGTGACCATATGC  56 27
        iscR NONE
        iscS 1911266 .. 1911282 +  -8.7  -3.02461   CGAATGGGCTCATCA              CTGATCC GCG GGATCGG              TGTTCAACGGAATTA  63 22
        iscU NONE
        iscA NONE
        hscB 1912654 .. 1912670 +    -8  -3.32769   CTGGAACGATTCGAA              GACTCG CTGTT CGAGTC              TTGATCCTTTAACGC  64 5
        hscA NONE
         fdx 1914959 .. 1914983 +  -5.6    -5.252   TAATGATATGGTGAA         GGCCGTGACCC TTGA GGGA-GCGGCC          TTTTTTGTGCCCGTG  90 94
        pepB NONE
    AHA_1754 1917750 .. 1917767 + -12.7  -3.53012   GACCGGCAACGACAA             GGGCACC TGCG GGTGCCC              TTTCGACAGGGGGAG  85 39
         ndk 1918456 .. 1918471 + -10.4  -5.45813   TCGAAAGAACCCCAA              GGGAGC CTCG GCTCCC               TTTTGTTTTTTGGTC 100 47
    AHA_1756 1919690 .. 1919701 +  -2.2  -3.78329   AACAGGATGGGATTT                CCGT CAAA ATGG                 TTTAACTTGCTAAGC  52 9
        pilF NONE
    AHA_1758 1921420 .. 1921435 +    -4   -2.6927   CCGGACTGCTCGCCT              CTCACTG CCG CAG-GAG              TAATCTGTCCGCCAT  42 7
        ispG 1922573 .. 1922591 + -12.4  -3.30507   GGGTTGAGCAACCAA             GGGCCACT CAG GGTGGCCC             TGTCTTTAGGTTGCT  78 34
        hisS NONE
    AHA_1761 NONE
    AHA_1762 1925834 .. 1925859 + -14.7  -4.06384   TCAATCTGAATATCC         GGCTCCTGGTC TTCG GACCCGGAGCC          TTTGTCGTCTTGAGA 100 48
        engA 1927393 .. 1927414 +   -13  -5.24129   AGAAATAAGGCCCAG           CGGCTGCC CTCACC GGCAGCCG            TTTTTTCTAGGGCCA 100 33
    AHA_1764 1927736 .. 1927751 + -11.8  -4.05991   TGAGGCGATAAAAAA              CCCGGC GATT GCCGGG               TTTATGCTGTGTGTT  90 38
        purL 1933650 .. 1933666 + -10.8  -5.60993   TCGCAAACAAAAAAA              CCGGCC CCTGT GGCCGG              TTTTTTTATGGCGGC 100 48
    AHA_1790 1959347 .. 1959357 +  -4.6  -3.37881   GCAGGTCCGGCATGG                 GGGT TGT GCCC                 TTACCTTTGTGTTGG  51 178
    AHA_1791 1959713 .. 1959735 + -14.9  -5.38054   CTCGATAACGCAAAA           CGGCATGGG TTCCC CCCATGCCG           TTTTTGTTTCTGGCG 100 46
    AHA_1793 1961163 .. 1961189 +  -2.1  -2.88544   CGGGCGCGCGAATTT         GGCAAACACCT GCATG AGGCGTGAGCC         TGTATGGGGATGGCC  40 2
    AHA_1794 1962035 .. 1962055 +  -7.5  -2.80622   CTGCTGGCTAACGTC            ATCCTCCTG CTT CAGGAGGGA            TGTCATGCGCTATAT  55 91
    AHA_1795 1963091 .. 1963120 + -19.5  -3.61398   TTAAGGTTCACTCAA       TAAAACAGGGCGC CAAG GCGCCCTGTTTTA        TTGTTGAGAAGAAAG 100 37
    AHA_1800 1968510 .. 1968536 + -13.6  -4.66609   TCTGCGGCGCTGCTA         ATGCGAGGGGCC TTG GGCCCCTCGCTG         TTTTTGGGTAGAGTG 100 49
    AHA_1801 1969346 .. 1969361 +  -2.4  -3.82083   GGCGGTGTCGCCAGC              GCCGCG TGAT CCTGGC               TTTCCCTTGTGCTCC  52 71
    AHA_1802 NONE
    AHA_1803 1970807 .. 1970828 + -14.4  -3.72695   CCAGGCTTGATGAAA           CGGGGCCG CTTGAC CGGCCCCG            TTTCATAGCCGAGAT  95 31
    AHA_1805 NONE
        cysB 1974103 .. 1974121 +   -16  -4.72272   GAGAGCAACAAAAAA             CGCCTCCC GAT GGGAGGCG             TTTTTCATGGCGGCG 100 55
         cmk 1975697 .. 1975718 +  -8.7  -2.90496   AACTGATGTCAGTCG           TCTGCACCA TGGA TGGCGCAGA            TAATTTAAAACAACC  62 35
        rpsA 1977469 .. 1977489 + -18.3  -5.37345   CTTGATGCAAGAAAA            GGGCGGCGT GTC ACGCCGCCC            TTTTTTATCATTGGC 100 43
        ihfB 1977842 .. 1977859 +  -9.9  -5.98675   AATAATGCAGAAAAT             GGCATAC TTGG GTATGCC              TTTTTTGTTTTTATG 100 36
    AHA_1811 NONE
    AHA_1812 1979470 .. 1979488 +   -16   -3.6692   CCACAAGATCATGAG             CCAGGCCG CTG CGGCCTGG             TGTTTTCAGGTCGAG 100 47
        pyrF 1980261 .. 1980282 + -17.3  -3.05384   CGATAATGGACAGGA           TGCCGGCCC GATG GGGCCGGCA            TTGCATCAGGGGCGG 100 35
    AHA_1815 NONE
        exsB NONE
    AHA_1817 NONE
    AHA_1818 NONE
    AHA_1819 1983774 .. 1983788 + -11.4   -5.4505   ACAGACAATAAAAAA               CCTCGC GAT GCGAGG               TTTTTTATTGCGACG 100 51
    AHA_1821 1986385 .. 1986408 + -12.4  -4.64334   CATCGCATAAAAAGA          ACAAGGGGCC GCCA GGCCCCTTGG           TTTTGTTGGGGGCTT 100 31
         tdk 1987081 .. 1987097 + -13.7  -5.52023   GAGTAGATAGAAAAA              GGCGCCA ATC TGGCGCC              TTTTTTGTTGCTGGT 100 59
    AHA_1824 1989124 .. 1989135 +  -7.2  -2.52543   GCCGTTGACGCCGGC                GGGG CTTT CCCC                 TAAATTACGCCCCGT  53 82
    AHA_1825 1989309 .. 1989340 + -21.8   -4.4009   CACCGCCAAATAAAA      CAAAAGGGCCTGTC TTGT GACAGGCCCTTTTG       TTTTATCCGGTGACG 100 33
    AHA_1826 1991045 .. 1991066 + -13.7  -4.43307   GTAACTTGCCCATCA           GGGGCACTG CTTG CGGTGCCCC            TTGTTTTCTTAACGC 100 37
    AHA_1827 NONE
    AHA_1828 NONE
    AHA_1829 NONE
    AHA_1830 1996548 .. 1996561 +  -2.4  -3.61764   CGTTATGGGAATGTC               CAGA ATAAAG TCTG                TTTAAAAGTTGATAA  50 51
    AHA_1831 1998352 .. 1998364 +  -4.1  -5.35365   TAGATTTGTAGCTTA                CAGTA ACG TGCTG                TTTTTGTTGTGTTTT  86 346
    AHA_1832 1999196 .. 1999215 +  -5.6  -3.19192   CTGGATTTGATTAAG            CCTGCCGA GTGA TCGCCGGG             TTGGATTGACTGAAC  52 14
    AHA_1833 2000730 .. 2000740 +  -5.4  -3.13371   CAAGGAATAAGGCCC                 GATG CCG CATC                 TCTCTTCCTGGGATA  50 31
    AHA_1834 NONE
    AHA_1835 NONE
    AHA_1836 NONE
    AHA_1837 NONE
    AHA_1838 NONE
    AHA_1839 2007108 .. 2007120 +  -5.5  -3.09516   CAAGAACGAGCAACT                CAGCG ATC TGCTG                TTCGATCATGCCGAG  50 80
    AHA_1840 2007860 .. 2007879 +  -2.8  -3.26471   TATTAAAATAAATAC            TTAAGGAG AGCA CGCCTTGA             TTCGTATAGAGCTAC  45 30
    AHA_1841 2010506 .. 2010538 +  -4.8  -4.18494   CCAGTTTGTGGCCGA      GGTGGGGGCTTG AGTATGGAG CAAGCCCTCGCA      TTTTCCCTGGCCCTC  62 13
    AHA_1842 2012056 .. 2012072 +  -2.9  -2.78073   GAAACTGGAGGTGAA              CTGATGA GCA TCCTCGG              CTTGTTACCGCTGCT  41 22
    AHA_1843 2012667 .. 2012690 +  -6.6  -2.62396   GTGCCGCTGGTAGGA          GGGGCGATGA GCTA TCAACACCCC           TGGTGTGCACGCCTG  51 28
    AHA_1844 2014087 .. 2014097 +  -4.6  -3.31461   ACCGCCTGGAGAGCC                 TGGC GGC GCCG                 TTGTCGAAATGAATG  51 3
    AHA_1845 2017644 .. 2017662 +   -16  -3.21912   TCTATTGATCGCGTC             GGGGGCAC GTA GTGCCCCC             TTCCTGCGTTGGAAG 100 33
    AHA_1846 2019164 .. 2019194 +  -4.7  -3.03243   AGTGAGTTTGACTGG       CAAGGCAAGGTTT GCCGG GAAACTTGCCCTG       TCTTGCGCAATGGAT  47 76
    AHA_1847 NONE
    AHA_1848 NONE
    AHA_1849 NONE
    AHA_1850 2025135 .. 2025155 +  -6.1   -4.2461   GTCGTGCTGAAGATG            TCGGCGATA GAC TATCGCTGC            TTTGTTAGTACAGAT  71 449
    AHA_1854 2028279 .. 2028301 +  -9.9  -6.02919   GCAGCAATAAAAAAA          CCGGCAA-CC TTGC GGCTTGCCGG           TTTTTTTATTTATCC 100 85
        clpS NONE
        clpA 2031433 .. 2031452 + -13.6  -5.18357   GAAAACCACAAAAAA            CCCCAACC GGAA GGTTGGGG             TTTTTTGCTGAATTC 100 55
    AHA_1861 2033956 .. 2033979 +  -3.7  -3.53012   GGGTTGCTGGCGCAT          CTGCTGGCG CAGCCC CTCCAGCCG           TTTGAGCAGCACCGG  51 310
         lrp 2037475 .. 2037501 + -16.7  -3.80733   AAGTCACGACATTCA         GAAACGAGCGG CCGGT CCGCTCGTTTC         TTCTTATCGAGTCGG 100 75
    AHA_1865 2040171 .. 2040195 +   -15  -4.38712   CCCCTCTATCATCCT          GGCCATGCCC CCTGC GGGCGTGGCC          TTTTATCGAGATAGC 100 47
        lolA NONE
    AHA_1867 2042495 .. 2042507 +  -4.8  -3.53094   TGACCCCGCTTGTCT                TGGC CTGGT GCCA                TCTTCTTGATTTCGA  52 206
        serS 2043967 .. 2043992 + -17.7  -2.60079   GCTCATTGCAGACGA         CAACGCCATGG CATG CCATGGCGTTG          TGCATTATGGCGTCG  95 43
        cvpA NONE
        purF 2046198 .. 2046215 + -12.7  -4.09628   GGTGTTGCAACGAGA             TGGGGGC CCAG GCCCCCA              TTGTTGTTTCCGCTC  95 57
    AHA_1871 2047178 .. 2047197 + -10.7  -5.82281   ATTTTTGAGCGCAAT            TCCCGGC CCCTGA GCCGGGA             TTTTTTTGTCTCTTT 100 93
    AHA_1878 NONE
        pspB 2054825 .. 2054858 +  -2.5  -2.57132   TGGTTGGAGAAACAA     GGT-ATGACGGTTTTC AAT GAGAGATGTCATGACC     GTTGTGGAAAGCCGG  38 19
    AHA_1880 2055365 .. 2055380 + -11.8  -2.83403   CGGCGCGATGGCCCC              GCCGGC GCGG GCCGGC               CTTTGATGGCGGGCA  72 48
    AHA_1881 NONE
    AHA_1882 2058027 .. 2058050 + -18.2  -5.00616   TTACAATTATCCGCC          GCAGCCGACC CTTG GGTCGGCTGC           TTTTTTGGGGGGCAA 100 80
        phhA NONE
        phhB NONE
    AHA_1885 2059467 .. 2059502 + -18.2  -4.85599   AACGTCTATAGATGG    CGCGGGCCTGCCCGGT GAAA ACGGGGCGGGCCCGCA     TTTTTATGGGCTGGC 100 40
        tyrR 2061285 .. 2061296 +  -7.2  -3.19642   CGGCTCACCCCTCGC                GGGC AACC GCCC                 TTCCTGGGTGCTGAT  59 176
    AHA_1887 2061861 .. 2061886 +  -4.7  -3.61398   CTCAAGCTGGCCAAG         GCCGATGA-GGG GGG CTCATGATCGGC         TTGTTCCGCCCCCCC  52 5
    AHA_1888 NONE
    AHA_1889 2063660 .. 2063677 + -12.7  -5.28176   GTGTAGATAAAAAAA             GAGCGCC TGAT GGCGCTC              TTTTTTGTGGCTCGC 100 48
    AHA_1891 2065768 .. 2065779 +  -2.2  -2.62038   CGGAAAATGAGGCTG                CGTT AAAT GACG                 ATTCATGATTTTGAG  38 130
    AHA_1892 2066065 .. 2066082 +  -4.9  -4.46854   TGATCGGTTACACAG             TTCAAAC AGAA GTTTGAG              TTTATTCTTCCCTGA  68 38
    AHA_1893 2067851 .. 2067881 + -24.2  -3.53012   CTGAACACCACAAAA       CAACAAGGGGAGCC ACT GGCTCCCCTTGTTG       TTTCAGGCAACGGCA 100 62
    AHA_1897 2071895 .. 2071918 + -15.4  -3.06696   GGCTGGCAATCATGA          TTCAGGCTCC CACG GGAGCCTGAA           TGTATTGCGAAAGGC  91 44
    AHA_1903 NONE
        araG 2081067 .. 2081083 +    -5  -3.29471   GTCAAGGCGCTCAAT              CTGGCC ATGCC GGCCCG              TTGATCTGCTAACCG  52 5
        araH 2082113 .. 2082137 +    -2  -2.62263   GTTCGACCGCTACAA          GCAGGTACGC AAGGC GCGCATCTGA          TCCTGTCCGACCGGT  38 1
        araC 2083249 .. 2083279 +  -7.4  -4.29227   TGGTCACCCCATGAT       GGGGTGGCTGCCTG GGG CAGGGGGCCGCTGC       TTTCTTCATCATTCC  77 81
    AHA_1909 2085192 .. 2085215 + -16.8  -4.84359   GGCGTGATAAATGGA          CAAGGCCCTC GCAT GAGGGCCTTG           TTTTTATGAGGCTGC 100 34
    AHA_1912 2086179 .. 2086195 + -13.7  -5.52023   TTGCCGAACAAAAAA              CGCAGCC CAA GGCTGCG              TTTTTTGTTGCTGCT 100 74
    AHA_1918 2093690 .. 2093727 + -20.1   -3.1855   CGACAGGATTTGAGC   GAACAAAAAGGGCTCCC GTCG GGGAGCCCTTTTTGTTG    TTGCGTCTTGCCGAG 100 44
        fabB 2097100 .. 2097115 + -11.8  -4.88407   ATGAGTCGAAAAAAA              GGCGCC GCAA GGCGCC               TTTTTCATTGGGTGA 100 51
        sdhC 2100252 .. 2100265 +  -2.4  -2.58579   TATTGGCGGGGGTAC               TGGT ATGGTA ACCA                ATTCTGCAACCTTCG  38 15
    AHA_1924 NONE
        sdhA NONE
    AHA_1926 2103143 .. 2103172 + -12.3  -3.55444   GGCCCGACCTCTGGA       TAGCCATCC-GTCA CCA TGGCTGGATGGCTA       TTTAAACCCTACAAG  81 67
        sucA 2106052 .. 2106073 +    -3  -2.93382   CCGTTGCGAAGGAGA          GGG-C-ACGC CGCT GCGTCGACCC           TCTCTGACTCTGGAA  42 43
        sucB 2107457 .. 2107473 + -10.1  -3.53761   TTAGAAAGATAACGA              GGGGCCA CCT TGGCCTC              TTTCACAGGGGATTG  71 168
        sucC NONE
    AHA_1930 2109606 .. 2109622 + -15.1  -5.32882   TATCTCTGATAAAAA              GCCGCCC AAT GGGCGGC              TTTTTTATGGTCGTA 100 55
    AHA_1931 2111219 .. 2111232 +  -3.8  -2.97838   AAATCGGGCCATAGG               GCGT ATAACC ACGC                GTTTGTCAGTGTATT  44 160
    AHA_1932 2111789 .. 2111829 + -22.8  -3.95153   CGAGCCATACCAACT G-CGAAGGGGCAGGGGAGT CATC ACTCTCCTGCCCCTTCGGC  TTTCTGGCTCCTTCC 100 95
        phnW NONE
    AHA_1939 NONE
        phnX 2121993 .. 2122010 + -14.1  -5.06414   TCAGGCATAAAAAAA             CCGGCGC CTTG GCGCCGG              TTTTTGTTCACCGAG 100 110
       asd-1 2129268 .. 2129287 +   -15   -5.4477   TGCACCCAGCATGAA            CAGGGGGC CGCG GCCCCCTG             TTTTTTTGCGACTTT 100 47
    AHA_1946 2132665 .. 2132693 + -18.9  -5.44119   TTGCCGCAAGCAAAA        CAGCCTGCCCCTT GGC AGGGGGCGGGCTG        TTTTTTTGCGCTCAA 100 64
    AHA_1950 2137225 .. 2137244 +   -15  -2.91582   AGGATCAAACAAAGA            GGGCAGCC CGCA GGCTGCCC             TCTGTCGATGCAATG  86 95
    AHA_1952 2139305 .. 2139323 +  -8.8  -4.48877   GTTTAGGTTGCCGGA             TGGGGCCA GAG TGGCCGCA             TTTTCTCCCTCTTTC  85 148
    AHA_1953 2141587 .. 2141607 + -18.3  -2.87564   GTATTCTGACCCTGC            GTCCCGGGC CGC GCCCGGGAC            TCTCTCACCCCATGA  95 32
    AHA_1954 2142451 .. 2142466 + -11.8  -4.73388   CCTGTGTGATGACAA              GCCGCC TTAA GGCGGC               TTTTTACTGCGCCTT 100 51
        metE 2145879 .. 2145902 + -16.8  -5.87996   ACGGGCATAACGAAC          GAGGGAAGGC GCAA GCCTTCCCTC           TTTTTTTGTTGGTTG 100 67
    AHA_1958 2148464 .. 2148479 + -11.8  -5.18726   TCAGTCCATAAAAAA              GGCCCC TCGC GGGGCC               TTTTTGTTGTCAGCG 100 30
    AHA_1960 2151333 .. 2151355 + -17.8  -3.59979   CTGCGGTCAAAACAA           GAGGGAGTGC CAG GCACTCCCTC           TTTGGGGTGAAACGG 100 63
        tnaA 2156375 .. 2156396 + -15.9  -3.87075   TCACAACATAAAAAA           GAAGCCCGC ATAT GCGGGCTTC            TTTGTGGGCGCTGAT 100 63
    AHA_1965 2158311 .. 2158324 +  -9.5  -5.14965   ACAAGCATCAAAAAA               CCGCC TTTC GGCGG                TTTTTTGATGGGGCT 100 59
    AHA_1971 2165652 .. 2165674 +  -8.4  -2.52676   CCCTCGGGTGCTTGG           TCATCCGGGT TGA ACCTGGCTGA           TCAGTTGCCGGCGTG  56 63
    AHA_1976 NONE
    AHA_1977 2171371 .. 2171389 + -10.3  -5.24531   GCATGTTCTCTGCAA             GCCCTGA CCCGT TCAGGGC             TTTTTTCTGCCAACT 100 95
        serC 2172632 .. 2172658 + -19.4   -5.1101   GTTTTTCCCCGATTG         CCGACGCCGGGG ACT CCCCGGCGTCTG         TTTTTTCCGTGATGC 100 44
        aroA 2174075 .. 2174098 + -15.3  -4.45117   CGCGCGTGATGAACC          CAGGCCCGC CTCGCT GCGGGCCTG           TTTCTTTGCGCTGTC 100 32
    AHA_1980 2175384 .. 2175402 +   -16   -5.4505   GCAAGACAATAAAAA             GCGCGACC TCG GGTCGCGC             TTTTTTGTTGGAGCG 100 72
    AHA_1982 2178697 .. 2178717 +   -14  -3.86312   AGATGAGAAACAAGG            GGGGGCAC CTGAT GTGCCCCC            TTGTTCGTTATGGCT 100 69
        guaB 2187300 .. 2187315 + -11.8   -3.8709   GATGGGCTGATAAAA              CGGGGC TGCG GCCCCG               TTTCTCCACCGCTTT  86 31
        guaA 2189012 .. 2189028 +  -9.4  -5.27023   TAAAAATGTAAAAAA              GACGCC CTTGC GGCGTC              TTTTCTTTTTCCAAT 100 70
    AHA_1991 2189690 .. 2189705 + -10.4  -5.05113   TCCAGCAACAAGAAA              GACGCC TTAG GGCGTC               TTTTCTTTATCTAGG 100 97
    AHA_1992 2191192 .. 2191219 + -12.2  -4.81852   TAGAGTGTTGTAGTT        GTAG-GGTGCAAT GAA ATTGCACCTCTAC        TTTTGTTCCTTCTAG 100 67
    AHA_1995 2194878 .. 2194905 + -12.8  -4.70613   ATGACAAAAAGATGT        CAAAAGGGGGCC TTCG GGCCCTTTTTTG         TTTTGTTCCGCTTTT 100 104
         tpm 2195920 .. 2195939 +   -15  -5.10461   ATTATGGTTTTTCCA            GCCGACCC CACG GGGTCGGC             TTTTTATTGGCTGCA 100 277
        sixA 2199469 .. 2199479 +  -6.8  -2.79183   TTACGGAATTATTTC                 GCAG AAG CTGC                 TGTCATACGGATACA  52 113
    AHA_1999 2199746 .. 2199776 + -13.4  -4.62783   CACCTCGCTGATCCG      C-GTCATGCCCGC CACCGT GCGGGCATGACTG       TTTTTGGGCTCCCTC 100 50
    AHA_2000 2200847 .. 2200864 + -12.7  -4.96848   ACGAGTGAGAAAAAA             GACCGCC GAAA GGCGGTC              TTTTTGTCTGCGGGG 100 33
         fbp 2204098 .. 2204128 + -19.9  -3.53012   ACCAGCCAACATAGA       CAAAACGGGAGCC ATCAA GGCTCCCGTTTTG       TTTGGGCGAGCGGCA 100 199
        lolC NONE
        lolD 2210285 .. 2210297 +  -6.9  -2.73875   GGTGAGCGGCGTGAT                GGCGG AGG TCGCC                TGATGTTCAAACCGC  52 10
        lolE 2211570 .. 2211605 + -24.8  -2.78934   GTTTGCTGATAAAAA    CGAAGGGCCCGCCGGT GCAA ACCGGCGGGCCCTTCC     GTTTGGGGTATCTGG 100 54
         tig 2214500 .. 2214526 + -10.1  -5.07652   GACTGTTAAGTATAA         TGGCTCGTGTG ATCTC CACTCGGGCCA         TTTTATTTTAGGGAC 100 62
        clpP NONE
        clpX 2216615 .. 2216639 + -14.4  -3.26839   TGATTTTTAATCAAA          TGAAAGGGGC TTTTT GCCCCTTTCA          TGCTTTTTGCGGTTT  95 46
         lon 2219211 .. 2219224 +  -5.9  -2.61602   GCAATGCGTGATGTG               GCGCG GGTT TGCGC                TAGATTGTCACTTGC  49 146
    AHA_2014 2219688 .. 2219709 + -13.7  -4.62203   ATACTGATTGACCAA           GGCGCATCG CAAT CGGTGCGCC            TTTTCATTATTTACG 100 110
        ppiD 2221697 .. 2221715 + -13.1  -4.62441   CAATCCATGTGAAAA             CGGCCCC TTGAT GGGGCCG             TTTCTTTATCTGCGA 100 54
    AHA_2026 2234100 .. 2234118 +  -5.9  -4.07568   GCCTAATTTATCCGG             GCCCGCT TAACC ACCGGGC             TTTTAACCAGGACCC  67 258
    AHA_2027 NONE
    AHA_2028 2235876 .. 2235891 +  -3.3  -4.30177   GAAGCTTTTTTTTAT              CAAAG TCTAAT CTTTG               TTTATTAATCTCATA  62 175
    AHA_2032 NONE
    AHA_2033 2240464 .. 2240482 + -13.1  -2.93492   TAACAGTCGTAAAAA             CGCCGGC TCAGT GCCGGCG             CTTTCATATATGCTG  79 51
    AHA_2035 NONE
    AHA_2036 NONE
    AHA_2037 2245497 .. 2245508 +    -3  -5.26316   TGCTCAGGTTATCTT                CAAT TGAC ATTG                 TTTTTTGTCAAATCC  79 19
    AHA_2038 NONE
    AHA_2039 NONE
    AHA_2040 NONE
    AHA_2041 NONE
    AHA_2042 2248406 .. 2248418 +  -3.4  -4.16921   GAAAGCACATGACAG                TGAC GACAG GTCA                TTTTCAAGCTTGTTG  61 270
    AHA_2046 2251947 .. 2251959 +  -4.9  -3.63367   ACCAATGATAAAGGA                TGATT CAA AATCA                CTTTTTCTTAGCACA  55 23
    AHA_2047 2252462 .. 2252481 + -12.2  -5.03715   CTAGGAAGTTGAAAA            GCCAAGGA GTGC TCCTTGGC             TTTTTTCGGGGTAAT 100 45
    AHA_2048 2252983 .. 2253000 +  -2.7  -3.21747   TGATCCTGTCTCCAT             TTCATTC AAGG GGATGAG              TTGCTAGTGGGCTCG  45 9
    AHA_2049 2253668 .. 2253693 + -14.7  -4.84918   GCATCTCCCAATGAT         GGCCAGAGTCC CCCG GGACCCTGGCC          TTTTCTATTTCTGGC 100 62
    AHA_2050 NONE
    AHA_2052 2254996 .. 2255007 +  -2.2  -3.85698   ATCTCACCAGTAACG                CAGG GGTG TCTG                 TTTCTAGGACGCGAG  52 81
    AHA_2053 NONE
    AHA_2054 2256712 .. 2256725 +  -9.5   -5.4833   TTTAGCTAATTCTAA               CCCGC TTCG GCGGG                TTTTTTGTTACCTGA 100 32
    AHA_2055 2258294 .. 2258315 + -14.5  -6.10295   CCGTTTTTTGTTTTG           CCAGTGCCA TTAA TGGCACTGG            TTTTTTTTATGTTGA 100 482
    AHA_2060 2265907 .. 2265919 +  -6.9  -3.15544   TCATTTCCTTATCTG                CGGGT TGG GCCCG                TTGGTGACACTGAGG  54 124
    AHA_2061 2266460 .. 2266477 +  -9.8   -3.8186   AGTATTGAAAGGATT             GGGGGC GCAGTA GCCCCC              TTGTTCGTTACACTC  76 13
    AHA_2068 2274280 .. 2274294 +  -2.1  -2.56271   AAAACAGTCTGATCA               GCAAG AGGAG TTTGC               GTGTTCTGGTCCCGC  38 29
    AHA_2069 2275139 .. 2275156 + -12.7   -4.7254   CGCGCCCAACAAAAA             GGCACCC TGCG GGGTGCC              TTTTTCGTGACAGCT 100 60
      mmsA-2 NONE
    AHA_2080 2290286 .. 2290319 + -14.6  -2.91276   TGCTCGGCAGCTCAC     CCTGACGACGGGGC TGGCGT GGCTCGTCGTCAGG      CTTTGTGAGCCAGCC  86 57
    AHA_2081 NONE
    AHA_2082 NONE
        mmsB NONE
        fabG 2294173 .. 2294198 + -15.5  -5.06816   GCGCTCTGTTGCAGA         TGCCCCTG-GCC CTC GGCGCAGGGGCA         TTTTTATTGAAACGT 100 47
    AHA_2085 2295991 .. 2296012 + -14.5  -5.71712   AACCGGCACAATAAA           GAGATGGCC CAAG GGCCATCTC            TTTTTTTATGTGCAG 100 39
    AHA_2086 2297043 .. 2297062 +    -5  -4.08948   CTCGAGTGCCGGGAT            GTGGCTGGT AGG GCCA-CCAC            TTGTTTCTGCAATTC  65 212
    AHA_2088 NONE
    AHA_2089 2301489 .. 2301526 +  -6.7  -2.74012   GCACCAGGGTCCAGG   CGATGTCGGCGGCGGCG GTAG CGACGCCGGCGGCGAAG    TCGTTGACGTACTGG  49 212
    AHA_2091 2303794 .. 2303825 + -20.2   -4.8048   TGAGCAGTAGTAATT      CGACAGGCTCCGCC CACC GGCGGGGCCTGTTG       TTTTTGGTGTGAAGG 100 47
    AHA_2094 2307887 .. 2307911 +  -9.3  -2.85351   AGCTTAAGCCACTGA         CGG-GCTGCC CCTGCT GGCAGCGCCG          TATCCTCTGCGGGGA  60 26
    AHA_2096 2309792 .. 2309808 +  -5.7  -3.05647   GTTCCGCTCATCGGC              GGCCGGT GCT GCGGGCC              TCTCTATGGTTGCCA  52 50
    AHA_2097 NONE
    AHA_2098 2311822 .. 2311845 + -16.8  -3.76169   AGGCTGAATGACAAA          GAGGGAGAGC CTGG GCTCTCCCTC           TTCTATTGCTGTTGA 100 47
    AHA_2100 2313990 .. 2314013 + -16.8   -4.8543   CCGGATAATGACCAA          GCGCTTCACC CTCG GGTGAAGCGC           TTTTTGTACCGGTTC 100 109
        msbB 2315186 .. 2315201 + -10.4  -5.07486   CGCCTTTATGTCATA              TGGCCC TGCG GGGCCA               TTTTTATTGGCGATG 100 48
    AHA_2102 2316421 .. 2316437 +  -5.8  -3.27475   ACAGGGATAGGCAAG              TGGCCC GGGAG GGGCTA              TCTTCTGATGCGCAA  54 116
    AHA_2103 2317363 .. 2317379 + -10.1  -5.55769   TGGTCAGTGAACAAA              GAGCGCT TGT GGCGCTC              TTTTTTATTGTCCGC 100 56
        polB 2322600 .. 2322618 +   -16  -3.82665   GGGGAAATGCAAAAA             GCCCGCTC GAG GAGCGGGC             TTTGCTAATCTGGTG 100 131
      ribE-1 2325879 .. 2325899 + -16.9  -3.16971   ATTTGCCATAGAAAA            GGGCCTGCA TCA TGCAGGCCC            TTGGCTATCTGGTGG 100 63
    AHA_2121 2330058 .. 2330088 + -16.3  -4.12198   CCAGACGTCAGAAAG      C-GACAACGCAGCC CTCG GGCTGCGTTGTCTG       TTTTGGGGCCTTGTG 100 57
    AHA_2126 NONE
    AHA_2127 NONE
    AHA_2128 2333924 .. 2333938 + -12.8  -5.30686   TGCAGAAAAGAGAAA               GGCGCC GAG GGCGCC               TTTTTTATGCCTGTT 100 48
    AHA_2135 NONE
    AHA_2136 2339188 .. 2339205 +  -8.3  -5.29445   GACAGGCAATAAAAA             CGGCGGG AATG CCCGCCA              TTTTTATTGTTGCCA 100 204
    AHA_2140 2344273 .. 2344288 + -11.8  -4.74787   AGTTGCAATGAACAA              GGGGCC CGCA GGCCCC               TTTCTTTATGTTTGT 100 44
        atoB 2346043 .. 2346064 +  -5.1  -3.76048   GACCCAGGCGGTGGC           GGTCAGATA GAGC TGACTGACC            TTCTCTTCATTGAGC  58 73
        fadI NONE
        fadJ 2362075 .. 2362104 + -16.5  -4.62471   CAATTGGCCAACCGA       CAAGGAGGCGACC CCGG GGTCGCCTCCTTC        TTTTTGGCGCTTGGA 100 58
    AHA_2155 2362502 .. 2362529 + -17.2    -5.055   TTTCGTTCATACCGC        CAAATGCCAGTC TTCG GACTGGCATTTG         TTTTTTGAGCCTTGG 100 49
    AHA_2156 NONE
    AHA_2157 2364144 .. 2364161 +  -6.9   -5.1356   GTTCAGCAATAAAAA             GGACGCC TGAG GGCATCC              TTTTTATTGCTGCCA  86 45
    AHA_2159 NONE
    AHA_2160 2369430 .. 2369452 +   -12  -3.56325   GGCCCCGCTTGACCG           CGCCGCGA CCGACAA TCGCGGCG           TTATCATTATGAGAA  81 62
    AHA_2161 2371071 .. 2371122 +  -3.5  -3.57615   CGCAGTTATTGTCAC GGGTTCTCTCCCCGGGGCGCTTT TCACTC GATGATCCCCGGCGAGATGACTC TTTGCGAGGTATTCA  51 87
    AHA_2162 2372406 .. 2372437 +  -2.8  -2.68806   GCGCGGTAACGGGCA      CAGGGCGCTGCC GACGAACA GGCCGCGCACTC       TCAGTTGTTATGGAG  40 95
    AHA_2163 2373685 .. 2373714 + -17.2  -3.05343   ACAAGTAAGGGGGCT       GCCGGGTGGTGA CTGCCA TCACCGCCCGGC        TGTTGCAAGTGTGGC 100 33
        hydA 2375274 .. 2375290 +  -7.2  -3.33492   CACAACGAAAGGTGG              GCCGGT ATCGC GCCGGC              TTGTCCCCTCACTGG  61 79
      arcC-1 2376273 .. 2376289 + -15.1  -4.22009   TGATGGTTGCAAACA              GGGGGCC CAA GGCCCCC              TTTCTGTTGGCTGGT 100 50
    AHA_2166 2377373 .. 2377407 +   -15  -4.08394   GATTGCCAGCAAAAA     TAAAAAGGGCCCGCCA TCA TGGCGGGCCCTTCTGG     TTTTAAGAACACTCT 100 44
    AHA_2169 2380757 .. 2380771 +  -2.8  -4.78572   CATTGTGGAAACTGG               TATCGG TTT TCGATG               TTTTATTAATTGGAG  70 264
    AHA_2170 NONE
    AHA_2171 NONE
    AHA_2172 NONE
    AHA_2173 NONE
    AHA_2174 NONE
    AHA_2175 2392195 .. 2392234 +  -2.6  -5.40072   TGCGCCGCACGACAG  GCGGGGCGTTTGCCCCGC CACA GCAGGTGAAATGGCCCGG   TTTTTTTAGACGGCA  81 107
    AHA_2176 2393797 .. 2393808 +  -3.6  -3.01712   GTCCCTCTCTATCGC                GGGG CCAG CCTC                 TCTTGGCCGGCCCCG  45 51
    AHA_2177 NONE
    AHA_2178 2397266 .. 2397282 +  -2.1  -2.66316   CACCTGCGCCGTCGA              ACGTGCC GGA GGCAAGA              TCCTATGATGCAACC  38 1
    AHA_2179 2397873 .. 2397883 +  -2.4  -3.90744   ACCCCGCCGCTCAAG                 CGTG CAT CCCG                 TTATTTCGGGCGGGC  52 126
    AHA_2180 2401546 .. 2401561 + -11.8  -4.27117   TGAGCAATAAGAAAA              GGGGCC TGCG GGCCCC               TTTCTGTTGTCAGCC  93 48
    AHA_2182 NONE
    AHA_2184 2406772 .. 2406809 +   -10  -3.70722   TATCCAACGTTTTGA   GTT-GGTGCCATTTTGC CTGAA GCAATATGGCGCCAAAC   TTCTATGTTCATCAA  74 55
    AHA_2185 2408374 .. 2408405 +  -8.7  -2.92472   CAGTGTCATTTGAAT      GAGCTTAACGGGC CAAATA GCCCGTTAAGCAA       TATGATACTTTATTT  62 24
    AHA_2198 2423880 .. 2423890 +  -2.4  -3.06515   AATGCCCCCTTTTGC                 TGCG GGA CGCC                 CTTTTGACCATCCAG  42 79
    AHA_2199 2425810 .. 2425820 +  -4.6  -2.76162   GCAGGCGCTTGCCGG                 GCGG TGA TCGC                 GTTTGCCCTGGCGTG  45 19
    AHA_2200 NONE
    AHA_2201 2426640 .. 2426696 +    -3  -3.72576   TAAGGGCGGGAGTGG CAGGCATGTCGCTCACGC-CGATGGG AACATGC CCCATTGCGGGTGGTTGACA-GCCGG TTTCATCCGGCCAGA  51 38
    AHA_2202 NONE
    AHA_2203 2428279 .. 2428290 +  -3.6  -2.82623   GAGGCAACACAGTGA                GCGC ACAG GTGC                 TAGTTATGCAGGAGA  43 192
    AHA_2204 2430030 .. 2430047 + -12.7  -5.79595   CGTCGTTATGCAAAA             CCGTGGG TCAG CCCACGG              TTTTTTCTTTTGGCC 100 68
         rnd 2431213 .. 2431229 + -15.1  -5.61596   CACAAGATAAAAAAA              GGGGCCC TCG GGGCCCC              TTTTTTTGTCGGCGT 100 42
    AHA_2209 NONE
         apt 2434833 .. 2434854 + -13.7  -3.66178   TTGCCTGCGTCCAGA           CCGGTGCCC GTAC GGGCATCGG            TTTGAAATTCAAGCG  89 78
        dnaX 2437589 .. 2437605 +  -7.2  -2.71712   GGGTAAACCCACGGC              CCGGCG CTGGA TGCCGG              ATTTCAAGACGAGAG  55 102
    AHA_2212 2438017 .. 2438046 + -20.9  -5.63504   GGCGTGACCAGACGA       CACCGCGGATACA GAGA TGTATCCGCGGTG        TTTTTTTATCCGGTT 100 85
    AHA_2214 2440557 .. 2440569 +  -6.2  -2.50791   TAACTGGGGCAACGG                CCCG GCTGG CGGG                ATGATTTTGTCGCTG  48 257
    AHA_2215 NONE
    AHA_2216 2442480 .. 2442500 + -12.6  -4.53419   CTGTTGTCATCCAAA            GAGCAGGC ATCTG GCCTGCTC            TTTCTTATTGTGATG 100 59
        hrpA NONE
    AHA_2218 2447514 .. 2447540 +  -2.9  -4.10161   TCTCTTGTCACTGTT        CG-GGGCCCGTG ATAG TATGCGCCCTCG         TTTTGCGAGGTGCTG  58 43
    AHA_2219 2447910 .. 2447941 + -19.6  -4.61527   CAACGAACGTTCCAG      TAAAGAGGCCACCC AAAC GGGTGGCCTCTTTG       TTTTTACAGCATTTT 100 45
    AHA_2220 NONE
    AHA_2222 2452654 .. 2452681 +  -3.2  -4.37092   CAGAACGCATCCTCT        TTGTGGGGGCCG GTGA TGGCCACCCCGG         TTTTCTCCCGCAGCT  64 415
    AHA_2226 2457920 .. 2457938 +  -8.8  -4.77157   GGCTGCATAAAAAAA             GCCCGC TTTGATC GCGGGC             TTTTTGATGGCTTGC  93 410
    AHA_2228 2461185 .. 2461217 + -22.9  -3.58269   GAATTGATGCTGAAA      CAACAGAGGCCGTCC TAT GGATGGCCTCTGTTG      TTTGGCGGTACGTTA 100 138
    AHA_2230 2463052 .. 2463072 +   -14   -3.6682   AACAGCCATGAGAAA            CGGGAGCC ACACA GGCTCCCG            TTTGCATCGATAGCA  95 59
    AHA_2232 2464932 .. 2464950 +   -16  -2.85896   CATAGCCAAATAAAA             GGGAGGCC TCA GGCCTCCC             TCGTTGCTTGATGAC  87 36
    AHA_2234 2468309 .. 2468327 + -12.4  -5.39721   CTGGGGTGGATTTGA             GGGTGGGC ATG GCTCACCC             TTTTTTATATAATGG 100 56
         udk 2469043 .. 2469059 + -11.5  -5.08824   GTTGAGAGAAATCAA              GCCGGGT GAT GCCCGGC              TTTTTTAAATGAACA 100 36
         dcd 2469719 .. 2469735 + -15.1  -3.49878   CAATGTGTTAAAAGA              GGGCGCC GAT GGCGCCC              TTCTCCATTTGCTTC  95 67
    AHA_2238 2471583 .. 2471597 +  -8.5  -5.16237   AAGCGTGTTGAGAAA               GGGCC CTTGC GGCCC               TTTTTTCATGGCCTT 100 54
    AHA_2240 NONE
    AHA_2241 2477525 .. 2477542 + -12.7   -4.7497   TGAATAAACGAAAAA             CGGGAGC CTTG GCTCCCG              TTTTTCATGGCTGAC 100 58
    AHA_2243 NONE
    AHA_2244 NONE
    AHA_2245 2481338 .. 2481355 + -11.3  -2.76265   ACGCAAATGCGGCCA             GGATCCG GTGT CGGATCC              GTTGGTTTATGGCAT  69 123
    AHA_2246 2481996 .. 2482007 +    -3  -2.65279   GCAGTTCTTGAAGAG                CTTA AACG TAAG                 TGAATTTAGGAGTTA  40 11
        rpmF 2482185 .. 2482205 +  -3.3  -4.03234   CTACCGCGGTAAAAA            GGTAATC GCTTAAG GATTGCC            TTTGTCTACGCAAAC  56 13
        plsX NONE
        fabH 2484191 .. 2484235 +  -7.9   -5.1764   GCGCTGGTTCGCCTC TGATCGTGGTCGGGATGAGC AATCTG GCTCATCCTG-CCGCTCTCA TTTTTGTCTTATCTA 100 23
        fabD NONE
        fabG 2486068 .. 2486081 +  -2.3  -4.56775   AAACTACCCCAACCA               GACGC AATA GCGTA                TTTTTAAAGGAAAAT  65 147
        acpP 2486351 .. 2486382 + -18.2  -3.40843   AATAAGTTCCTGTTC      TGAAAGAAGCGGCC CAAG GGCCGCTTCTTTTA       TGTTTACCCCTTTTC 100 36
    AHA_2253 2487665 .. 2487679 +  -7.8  -2.62263   TTCAAACGCGTATAA               TTCGCC CTG GGCGGA               TAGTATGGGCCCGAT  54 26
    AHA_2254 2488554 .. 2488593 + -14.2  -2.94912   TCGGCTTTACACCCT  GCTCGCGGGCGCGGCG-CT GAC AGTCGCCGTGGCCGGGGGC  TATGTACATTACAAA  86 41
    AHA_2255 NONE
         tmk NONE
        holB NONE
    AHA_2258 2491911 .. 2491929 + -17.4   -4.3467   AGCGATAACAAACAA             CGCCCCGC ATA GCGGGGCG             TTTTACTATAACAAT 100 33
    AHA_2259 2493253 .. 2493263 +  -2.6  -2.81625   CGCGTCACTCACATT                 TTTA TGT TAAA                 TGATATCTTGTTGAT  39 47
    AHA_2261 2493812 .. 2493838 +  -7.3  -4.11216   ACTGGTGTTCGGATA         GCCTTAAGCTT AGACA AGGCTCAAGGC         TTTTCAAGATCCACG  74 158
        prpB NONE
    AHA_2266 2501536 .. 2501549 +  -4.5  -3.74519   ATACGCGCAGGCAGG               CGG-GC AGG GCGCCG               TTTCATCACCCTGTT  55 97
        prpD 2503075 .. 2503092 + -14.1  -4.04318   AGCCATAAACGAAAA             GCGGGCC ACTC GGCCCGC              TTTGTCATGTCTGCC 100 61
    AHA_2269 2504563 .. 2504585 +  -4.2  -4.91109   TTTTTTGTTTTATTT          TGAGAGGCA TGAAAT TGCCTC-CA           TTTTTGTCATGAAAC  77 144
    AHA_2270 2506220 .. 2506243 + -16.8  -3.90291   AAGTGAAAAAGAAAA          GAGGCCAACC CGGA GGTTGGCCTC           TTTCATTGCGGCAGT 100 96
    AHA_2275 2511868 .. 2511887 + -13.6  -4.55128   TAGCAAAAACGGAAA            GGGCCTGA GCAA TCAGGCCC             TTTTCATTTGCGGCT 100 63
    AHA_2277 2513407 .. 2513418 +  -5.8  -3.88291   AATAAACACACTGTG                CAGC ATCA GCTG                 TTTATAGCGGTGCTG  63 168
    AHA_2278 2514866 .. 2514880 +  -2.8  -3.60048   AAGTTCAGGAGCATG               GCTG TAATGAC CAGC               GTTTTTTAACCGGCA  49 71
    AHA_2279 2517037 .. 2517052 +  -4.6  -2.52543   GATCGGAGTTGTTTA              GCGAAC AACT GTACGC               TAAATTGGCCCGGCT  43 51
        fabA 2517683 .. 2517709 + -15.2  -4.14739   GTCAAACTGAACAAC         GTAAAGGGGCCA TCA TGGCCCCTTTCC         TTTTGCAATGAGTGA 100 55
        ccoN NONE
        ccoO NONE
        ccoQ NONE
        ccoP 2542036 .. 2542065 + -18.1  -3.83921   CACGTGATTACTCAG       CAAAAAGCCTCGA CTCT TCGAGGCTTTTTG        TTATCTTGTGTTGAC 100 52
    AHA_2299 2542696 .. 2542720 +  -5.7    -3.727   CAGGCCGGGTAGCCT         GCGGCCAGCT GTCATG AGC-GGCTGC          TTTCACTGTGGTGAG  60 105
    AHA_2300 2545214 .. 2545228 +  -4.2  -3.76224   TGGTGTACCATGACC               CCTTTC ATT GCAAGG               TTTGCTGCATGAACA  55 131
        ccoS NONE
    AHA_2302 2546082 .. 2546092 +  -3.2  -4.09243   ATACCCTCTTGATCG                 GGAT TGC GTCC                 TTTTGAAACCCTATC  58 9
         fnr 2547020 .. 2547033 +  -3.1  -4.56597   TAATGGCTAAAGGTC               TGCCA TCAT TGGTA                TTTTTGCCAAGGAGG  67 123
    AHA_2304 2548036 .. 2548046 +    -4  -4.84017   GGGACATGGCTATAA                 TAAG CCG CTTA                 TTTTTGTCCCGGGTT  75 60
    AHA_2305 2548992 .. 2549022 + -17.8  -4.82901   AGCCCACCTCAACCA       TGAAAAAGGAGCGC CTG GCGCTCCTTTTTTA       TTTTTATGCCGACCA 100 40
    AHA_2308 2551446 .. 2551472 + -11.6  -4.59853   CTAGTCCGCTCGTTG         CGGGTGCCAG TGCTCTT CTGGCACCTG         TTTTTCCCCGCTTCC  95 37
        rbsD 2552041 .. 2552053 +  -6.9  -4.27316   CAACCTCATTCTCTG                CGCCG GCG TGGCG                TTTTAAATTCCCAAG  74 7
        rbsA NONE
        rbsC NONE
        rbsB 2555477 .. 2555496 +   -15  -4.18762   GCAAGTAAGTTGACG            GGGGGAGG TTCG CCTCCCCC             TTTTCACTCAAGGTT 100 33
        rbsK NONE
    AHA_2314 2557540 .. 2557572 + -14.2  -4.60797   AATACCTGCAATAAA     AGC-GCAAGGCGACC CTGG GGTCGCCTTGCTGCA      TTTTGTCTCTGGCCG 100 52
    AHA_2329 2576213 .. 2576232 +   -15  -3.83998   GCGAGCCAATGAAAA            GAGCGGCC ATGA GGCCGCTC             TTTGGTATCGGGTAA 100 488
        ubiG NONE
       gph-1 2580744 .. 2580767 + -13.9  -4.17089   CCTTGGCAGTGACCA          CGGGGGATC CCCAGC GATCCCCCG           TTTTGGCGGTTTGAC 100 160
        nrdA 2583462 .. 2583486 + -18.6  -2.86011   AAGATCTGATGAACC          GGGCGGGAGC ATGAA GCTCCCGCCC          TCCTGTTTCCCCTTA 100 32
        nrdB NONE
    AHA_2335 2585004 .. 2585025 + -17.3  -5.09895   GTCAGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTACATCCATC 100 57
    AHA_2337 2586629 .. 2586653 +  -8.5  -4.35693   GCAGCCAGAGCAACC          TGGCTGGGATT TTT AAACCCAGCCC          TTCTTTTATCCCTTT  81 10
      malI-2 2593482 .. 2593522 +    -8   -3.6215   CACCCTGGTGGTGCG  CCAATCCTGCGGCAGCCC CTAGC GGGCCGCCGCACGCGCGG  TTTCAAGTGGCTTGC  68 4
        fruR 2599400 .. 2599431 + -23.1  -5.02074   ATCCTCTCTGCATCG      CGCGCCGCTGCGA CCAGGT TCGCAGCGGCGCG       TTTTTTCACCAGTCA 100 40
    AHA_2350 2600928 .. 2600952 + -21.5   -4.9792   AGCAAAAGCGCAAAA          GCCCCGCCAAC CCA GTTGGCGGGGC          TTTTTCTATGCCATC 100 68
    AHA_2351 NONE
    AHA_2352 2602285 .. 2602305 + -18.3  -4.65895   CCCGGATATAGAAAA            GCCCCGCCA GAG TGGCGGGGC            TTTTTACATCAACCG 100 70
    AHA_2354 2604914 .. 2604931 + -12.7  -4.27259   AAGGCCCATGAAAAA             GGCGACC CTGA GGTCGCC              TTTTGACTGTGTCTG 100 53
    AHA_2357 2607666 .. 2607685 + -10.7  -5.60993   AGCAGCATAAAAAAA            CCACCGC GACCTG GCGGTGG             TTTTTTTATGGGCGC 100 78
    AHA_2359 2609978 .. 2609994 +  -7.2  -2.75992   GCCCCCAGGTGGCGC              CTCGGC CCAGC GCCGGG              TGATGTTGCGTGCCC  52 364
    AHA_2365 2615566 .. 2615581 + -11.8  -5.28176   GCCCTGCTAGCAAGA              GCGCCC CACG GGGCGC               TTTTTTGTGCCTGCC 100 50
    AHA_2366 2615910 .. 2615923 +  -9.5  -5.61596   CGGCAGAACAAAAAA               CCGCC TGAT GGCGG                TTTTTTTGTGGCGAT 100 45
    AHA_2367 2617528 .. 2617541 +  -9.5  -5.69379   ACATAAAGTAAAAAA               CCGCC AGCT GGCGG                TTTTTTTCATTGTCT 100 64
    AHA_2381 2632353 .. 2632367 +  -2.8  -3.31269   GCCGGGTCAGCTATC               TTGGGC TCG GTTCAA               TTCATATAATGTCGC  47 103
        tpiA 2633206 .. 2633248 +  -9.3  -2.79183   GCCCCCTCCTGCATA TCGCTTTTCCTATGGCA-GC CGCC GCATCCCATAGGAAAGCCGA TATAGTAAAAGTGGC  60 65
        pfkA 2634314 .. 2634330 + -13.7   -5.4505   GTTGCTGTGACAAAA              GCCCTCC ACT GGAGGGC              TTTTTTATTGAGCCC 100 54
    AHA_2384 2636762 .. 2636785 + -16.8  -5.41746   ACAGCCGGATACAAA          CAAGGCAGCC CGTG GGCTGCCTTG           TTTTTTTCACCCCTT 100 44
      glgX-1 2642752 .. 2642777 + -21.9  -3.96148   TGCGGCCAGCAAAAA         GCCCACCCCGG GCAA CCGGGGTGGGC          TTTGTCATGACGCCA 100 50
    AHA_2399 2647617 .. 2647650 +  -3.7  -3.13403   CGTCAGCCCCTAAGG     TAACGCCTTCCTACG CAGA TGACGGGAGGCGATA      TGTTACTGGAAGGGC  45 50
    AHA_2400 2648519 .. 2648545 + -20.2  -4.03234   AGCATCACAACACAA         GGGGCCCGATCT TGC GGATCGGGCCCC         TTTGTGTAGACAGCC 100 40
    AHA_2403 2650941 .. 2650960 +   -15  -3.27774   ACCGCAACAACGACA            GAGGGGCC CGCA GGCCCCTC             TTCATCATTCAGCTC  95 49
    AHA_2406 2653594 .. 2653620 +   -10  -3.06696   GGACAACGCGACACG         GCTGCTGCGTGC AGG GCGCGCATCTGC         TATATTACGCCCCCG  67 61
    AHA_2407 2655135 .. 2655148 +  -9.5  -5.55664   CGTCATAACAAAAAA               CCGCC CAAG GGCGG                TTTTTTTCATGATGG 100 57
    AHA_2412 NONE
    AHA_2413 2658921 .. 2658979 +  -2.1  -3.33696   GAGTCTAGCCAGTCA G--CCTGCCACCGGTCCCGTTGGCGGCAG GCG CCGCGGCAGACCGGGCCGGCGGCGTGAAC TTCGTTGACAAGGAC  45 116
    AHA_2414 2659505 .. 2659536 +  -5.6  -3.09635   TCTACAAGCAGCTCT      GAGCCGCGCACTGC CTCC GCTTCGCGCGCCTC       TTCACTGCTCGCCCT  50 24
        gldA 2660922 .. 2660954 + -15.6  -3.05463   GAGCCGTGATCATAC      CGACAAGGCCGGCT CCAGC GGCCGGCCTTGTCA      TTCCCTGCCCGACCT  93 55
    AHA_2416 2661376 .. 2661393 +  -5.5  -3.12351   GACCAAGATGACGGC             TGAGGCG ACAT TGCCTCG              TTCGGTGTGCAAGCA  50 87
    AHA_2420 NONE
    AHA_2421 NONE
    AHA_2422 2667357 .. 2667388 + -20.2  -2.85351   GTTTGCCCCATGATC      TCAGTCAGCCCGGC CACT GCCGGGCTGACTGC       TATGGTGTGCGCCCC 100 46
    AHA_2423 2667996 .. 2668011 + -11.8  -3.93038   ACCTCGCTTGAATAA              GGGCGC CAAC GCGCCC               TTTGATATTCAGCTG  90 262
    AHA_2429 2675819 .. 2675843 +  -8.5   -2.9162   TTTAATGTTTTCGTT          TGCCTTGACTC TGT GAGTCCCGGCA          TGCTTTGACCAGTTC  59 77
    AHA_2430 2677337 .. 2677352 + -11.8  -5.12971   TATGCCGAGTACCAA              GGCCCC TGAC GGGGCC               TTTTTATTGGCTCTT 100 41
    AHA_2433 2681621 .. 2681646 + -13.3   -4.5954   CACGCAAGCCAAAAG         AGAAGGCGACC CTGG GGTCGCCTTCG          TTTTGTCTGCTATGG 100 293
        pabB NONE
    AHA_2436 2685551 .. 2685563 +  -3.5  -2.87756   TTAAACTAACGTAGG                TTTTT ATA AAAAA                TAATTGATTAATTCT  44 83
    AHA_2437 2687030 .. 2687053 + -18.2  -5.31275   CCATGCCAGCAAACA          TGCCAGCCGG GTAA CCGGCTGGCA           TTTTTTATGGTGCCA 100 48
    AHA_2439 2691281 .. 2691291 +  -5.4  -3.67792   AACATTTATTTTTTA                 TGTC TTT GACA                 TTTACCTCACTATCG  58 362
    AHA_2440 NONE
    AHA_2441 NONE
    AHA_2442 2696282 .. 2696297 + -11.8  -5.10461   TCCACCATAAAAAAA              CGCGCC ATTT GGCGCG               TTTTTCTTGCATCAG 100 52
        nhaB 2698957 .. 2698972 + -11.8  -4.19735   GCATTGATACCATAA              GGGCCC ATGC GGGCCC               TTTCCTTTTGGCCCC  91 34
        dsbB 2699578 .. 2699600 + -17.8  -5.07941   AGCAGTACAAATAAA           GAAGGGAGCC AGC GGCTCCCTTC           TTTTTATGTCATTTT 100 48
    AHA_2449 2703043 .. 2703061 +  -5.8  -4.81212   CCTCCCTTTTGATTC             CGCATCCG CCC CGGCAGCG             TTTTGTTCTGCTGCG  78 126
    AHA_2450 2705442 .. 2705462 +  -9.7  -4.61873   AGTACACCAACTCAA            GGGGAGC AGCTATG GCTCCCC            TTTTCGTTTATGCCG  91 64
    AHA_2451 2707167 .. 2707201 + -16.4  -3.05046   AAGCCAGCCCGTCAT     CCGCGAGGCTCCTCCT CTG ACGGGGAGCCTCGCGC     CTTTTCAGCCGCTGC 100 39
    AHA_2452 NONE
    AHA_2453 NONE
    AHA_2454 2710420 .. 2710437 + -12.7  -5.06414   TCTTACACAGCAAAA             GAGCGCC GACA GGCGCTC              TTTTTATTGGCAAGA 100 50
    AHA_2459 2716334 .. 2716365 +   -18  -3.17763   CGCCGCGACTCGTGT      CGACAGAGGGGGCC CAGC GGCCCCCTCTGCTG       TTGCTGGAGTGTGAC 100 42
        glpA NONE
    AHA_2461 NONE
        glpC 2720762 .. 2720781 +   -15  -5.08601   CACCAGATAGAAAAA            GAGCCGGC AATT GCCGGCTC             TTTTTATTCACATCC 100 73
        nrfA NONE
    AHA_2465 2734312 .. 2734322 +  -2.4  -2.62983   ACCTCGGGCAAGGAG                 GCAC AAT GAGC                 TGCTCTCGCCGTCAC  38 17
    AHA_2466 NONE
    AHA_2467 2735977 .. 2736004 +   -17  -4.21438   ACGGTATGATCACCA        GCGCCAGCCACC CTCG GGTGACTGGCGC         TTATTTGTTGCGATG 100 40
      ccmF-2 2738051 .. 2738066 +  -2.5  -2.57211   CCGCCTCCTGCCCTC              GGCTC GAACAG GAGTC               CTTATGAACGCCCGT  38 3
    AHA_2469 NONE
    AHA_2470 2739864 .. 2739892 + -12.4  -3.53012   GAGGCTGACCGCACG        CGTGATTGGGGC TGAAT GCCCCTGTCACG        TTTGGCCCGCACAAA  81 33
    AHA_2471 2740780 .. 2740791 +  -2.2  -2.54193   TATCGGGCCATTAGA                CGTT GTGA AGCG                 TCAATTACCGTCATA  38 356
    AHA_2472 2741794 .. 2741827 + -16.1  -4.54026   CGGCAATCCTCGTCA     AAAAAGCCCCCGCAT CCAG GTGCGGGGGCTTTTG      TTATTTTGTTTCGGG 100 47
    AHA_2480 2758364 .. 2758398 +  -7.1  -5.55769   TGCTCTGACCCCCAA     CCGCGCCCCTC TTCTCTTCAACTC CAGGGGCGCGG     TTTTTTCTTCTCAAG 100 33
    AHA_2481 2760527 .. 2760545 + -11.7  -4.93365   CGCTGAATAGAAAAA             GGGAGCC ATATC GGCTCCC             TTTTTAGTTGTGGCG 100 50
    AHA_2484 2763690 .. 2763715 +  -4.6  -3.44051   TCAGAATGATGTCGT         TGAGCTGGCG ATAGCG CTCCAGCTCC          TTCTGATCGTAACGG  53 32
    AHA_2497 2780819 .. 2780856 +  -7.1  -2.71712   TCTAATGCTAGCTAA   TTTTTAGCCTGTGATCA TCAG TGATCATAGGCTATACG    CTTTCACCAACCAAA  52 26
        trkD 2783178 .. 2783209 + -18.8  -4.42386   CGTGAGTTGCGCTAA      AGAGAGAGGGAGGC ATTG GCCTCCCTCTCTCA       TTTTGTAACTAACCC 100 44
        hyfA NONE
    AHA_2500 NONE
    AHA_2501 NONE
    AHA_2502 NONE
    AHA_2503 NONE
    AHA_2504 NONE
    AHA_2505 NONE
        hycI 2791375 .. 2791402 + -11.4  -2.73483   AAGGCATATAAAAAC        GCCCGATGTT AAATTAAA AACATCGGGC         TAATTGCCATGAAAT  69 65
    AHA_2507 2791592 .. 2791610 +  -7.4   -3.0264   AGCCGAGAAGGCTTT             GGCAGG TTCGATT CCTGCC             TCTTCCGCCAAATTT  57 1
        selA NONE
        selB NONE
        hypF NONE
        hypC NONE
        hypD NONE
        hypE 2800021 .. 2800031 +  -8.2  -3.09933   CGCGGATCTGTTGAG                 CGGC CAT GCCG                 TTCGGTCAATTACAG  60 27
        hypA NONE
    AHA_2515 2801559 .. 2801584 + -19.1  -4.60797   AACGGTAGAAAACAA         GAGAGGGAGGC TGAT GCCTCCCTCTC          TTTTATCTGTGGACC 100 61
    AHA_2527 NONE
    AHA_2528 NONE
    AHA_2529 2816625 .. 2816638 +  -2.3  -2.74322   CGGAATTGACGGAGT               CAGAC CATG GACTG                GTTTCACAACTTGCA  39 63
    AHA_2530 NONE
      cheW-3 NONE
      cheR-2 NONE
      cheB-3 2820770 .. 2820780 +  -3.2  -2.92078   TCAGCCGTCCGGATC                 TACG AGG CGTG                 TAATTATGTCATTGG  42 12
    AHA_2534 NONE
    AHA_2535 2823750 .. 2823778 + -21.7  -2.88231   TAATACAAACGCTGA        GACCCGCCCGGCC ATG GGCCTGGCGGGTC        TCTCCTCCTTATCCT 100 38
       alr-2 2825339 .. 2825355 +  -6.5  -3.75169   GAGCAAGCGGGTACG              GGCCTGT GAT ATGGGCC              TTTCATCCCGTCATC  62 39
    AHA_2538 2826879 .. 2826900 + -17.3  -3.61764   CCTGATAAACAAAAA           GGCCCCGTC TTGC GACGGGGCC            TTTGCCAATTGGTGG 100 88
    AHA_2541 NONE
    AHA_2542 2829706 .. 2829725 +   -15  -5.37593   GAGCCACATTCGAAA            GCCCAGCC TTAT GGCTGGGC             TTTTTTCGTTTCCCC 100 35
    AHA_2543 NONE
    AHA_2544 2830965 .. 2830975 +  -2.4  -2.77182   CTCGGCCCAGGAGAT                 GGGC GCC GCCA                 TGATTGCCTATGACG  39 98
    AHA_2545 NONE
    AHA_2546 2834708 .. 2834743 +   -14  -2.73706   CGCGGCGCAGCAGCG    GATGACAAGGCGGCTC AGCG GGGCCGCCTTTTCAAC     GTCTTCTCTTTTGGT  83 49
    AHA_2547 NONE
    AHA_2548 2837008 .. 2837019 +  -3.6  -3.58533   CAGCTGATAAATGTA                CCGG GACG TCGG                 TTTGCCCCCTTCTCC  51 120
    AHA_2549 2838357 .. 2838381 +    -5  -2.72745   GCATACAGGATCACC         CCCGTC-ACCA AAAC TGGTAGACTGG          ATGTTTGTCACTCCC  47 6
    AHA_2550 2839631 .. 2839662 + -19.5  -4.17048   TGAGCTATTAAAAAA      CGCGGCCCCTCTCG CTCAA CG-GAGGGGCCGCG      TTCTTTTAGCCGCAG 100 38
    AHA_2552 2840993 .. 2841013 +  -3.1  -2.67515   GGGCGGCTGGTGGAA            CTCAAGGGC GCT GCCCATGGC            TGATCTGGTGGTGAA  40 2
    AHA_2553 NONE
    AHA_2554 2844895 .. 2844917 + -10.6  -2.53263   AGCATCCACTTGTTC           TCAAGCGGGC TGA GTTCGCTTGA           TGCCTTGAAGCTGCA  59 278
    AHA_2561 2855352 .. 2855373 +  -6.5  -5.00616   GACGGAGGATGGCGA           GCATCCTGT GCCA ACAGGGGGC            TTTTTTGACCCGGGC  86 39
    AHA_2562 2855749 .. 2855773 + -18.6   -2.6155   TTCCTCATGAAAAAA          GGGCCGCAGC ACCGG GCTGCGGCCC          CTTCCTATTCCACGC 100 55
    AHA_2565 NONE
    AHA_2566 NONE
    AHA_2567 2858736 .. 2858763 + -12.8   -4.7629   CCTGACAAAGCCCGA        TAAAAAGGCCGC AAAC GCGGCCTTTTTC         TTTTTCAATTAATGA 100 296
        argA 2861041 .. 2861055 +  -4.2   -4.7657   AGTCATTGATTTTAC               GTTGGC TTG GCTGAC               TTTTTGAACTTTTTC  74 40
    AHA_2570 2862829 .. 2862848 +   -15  -5.28942   CATGGAAATAATAAA            GAGGGGCC GGCT GGCCCCTC             TTTTTATTTAGGGTG 100 54
    AHA_2572 2866524 .. 2866551 + -18.6  -4.48299   TCGCGGGACAGATGA        CAAAGAGGTCGC CCAG GCGACCTCTTTG         TTTATTTGCCTATCC 100 50
    AHA_2574 2868689 .. 2868702 +  -2.3  -2.52543   CAAGTGCGCCGGCTA               TCAGG CCGC CCTGC                TCAATTGACAAGGGT  38 4
    AHA_2575 NONE
    AHA_2576 NONE
    AHA_2577 2871980 .. 2872000 +  -4.6  -3.41126   GCAGCCCTCCGCTGC           CGGAC-CCG CATC CGGAGCCCG            TTATGGACTTTCTCC  51 175
    AHA_2578 2873433 .. 2873458 + -20.5  -4.65916   AGACCAGTAAAAAAA         GCGACGCAGGC CATG GCCTGCGTCGC          TTTTATTGGAATGGG 100 64
    AHA_2581 NONE
    AHA_2582 2877345 .. 2877365 + -18.3  -3.72576   CCGCCTAAACCCCGG            GAGGGCGGC CTG GCCGCCCTC            TTTCATAAGGAGACC 100 33
    AHA_2583 2878202 .. 2878221 + -13.6  -4.77036   CCCCGCAACAAAAAA            GGAGAGGC CAAG GCCTCTCC             TTTTTCATAGTGCGC 100 44
    AHA_2586 2882090 .. 2882116 + -25.2  -3.90112   CGCCCCATAAAAAAA         CCGCCGGGCAGC GTG GCTGCCCGGCGG         TTTCATTCCGCAAGC 100 31
    AHA_2590 2887805 .. 2887820 + -11.8  -4.18494   ATGCGCATAAAAAAA              CGGGCC CGAG GGCCCG               TTTTGCATGGGAATG  91 53
    AHA_2600 2898277 .. 2898302 + -20.5  -5.14563   CAGCCCCAGCAACGA         CAAGGCCCCGC AGAT GCGGGGCCTTG          TTTTTTACTGGCAAG 100 50
    AHA_2602 2900672 .. 2900697 + -16.1  -5.00884   CACCACAGCGCCATC         ACAGGCCGCCC ACCC GGGCGGCCTGA          TTTTTTGCAGCCGCT 100 62
    AHA_2603 2900959 .. 2900980 + -14.5  -5.26119   AAATTCCCCGAGAAA           GGCCTTGTC AGAC GACAAGGCC            TTTTCTTTTTGGCGC 100 40
    AHA_2604 NONE
    AHA_2605 2903049 .. 2903068 + -16.4  -5.76633   TCACCTCCATCAAAA            CGGCCCGC AGAT GCGGGCCG             TTTTTTTATGTCTCA 100 49
         alr 2904995 .. 2905012 + -12.7  -4.56133   CTTTGCCATAAAAAA             GGGCTCC CGCG GGAGCCC              TTTTGCTTGTTCGCC 100 47
    AHA_2615 2913730 .. 2913757 +   -12  -3.17219   TAACTGCTTGAAAAA        TGGTGCGTGAGC CCAT GTTCACGCCCCA         TTCATCCCGCTTCTG  78 30
    AHA_2616 2916717 .. 2916736 + -16.4  -5.76237   TGAACCGACTCGAGA            GCCCGCGC ACAT GCGCGGGC             TTTTTTGTTTGTCTA 100 46
    AHA_2617 2918042 .. 2918066 + -17.3  -2.71011   TATTTTGCCTTCTGA          GTTATCCCCAG AAG CTGGGGATAAC          TCATTGGACAAACCT  91 26
    AHA_2618 NONE
    AHA_2619 NONE
    AHA_2620 2922413 .. 2922429 +  -9.4  -5.40072   AACCATGTCAAAAAA              GGAGCC GTCAG GGCTCC              TTTTTTTGCAGAACA 100 49
    AHA_2621 NONE
    AHA_2622 2924075 .. 2924103 + -26.1  -5.00616   CGAAGACGTCGTCGC        CAGCGGGCCGGCA CCA TGCCGGCCCGCTG        TTTTTTGGCGCCAAG 100 42
    AHA_2623 2926020 .. 2926042 + -11.3  -2.50994   AAGGTTGAATTATCA          GGG-CCGGCA CAAC TGCCGGGCCC           CTTCGTCACGTTAGA  68 112
        dacB 2927532 .. 2927544 +  -6.2  -3.30124   TTGATGATGACGGCC                GGCG AAACG CGCC                TTATCGAAGATGGCG  54 56
        grxA 2927926 .. 2927941 + -11.8   -5.1861   CACCTTGTGAAAAAA              GGCGCC ATCA GGCGCC               TTTTTTCATGGTCAA 100 44
    AHA_2627 2929790 .. 2929805 + -10.4  -5.27206   AAGGCTCATGAAAAA              GGCTCC CGCG GGAGCC               TTTTTGTTGTCTGTC 100 43
    AHA_2630 2934311 .. 2934332 + -15.9  -4.67608   GCCTCGCCATCACAA           CACACGGGG CAGG CCCCGTGTG            TTTTATCTTCCGGTC 100 43
    AHA_2632 2934794 .. 2934809 +    -4  -3.29144   CAGCGTCACCTTCAC              CTGGGTC ACC GACC-AG              TTGTAGAGCAGGTAG  48 283
        rnfA NONE
        rnfB NONE
        rnfC NONE
        rnfD NONE
        rnfG NONE
        rnfE NONE
         nth NONE
        gloA 2943050 .. 2943065 + -10.4  -5.31456   CCCGAAAAACAAAAA              GAGCGC CAAG GCGCTC               TTTTTTATGGATTCG 100 53
         rnt 2946830 .. 2946849 + -13.6  -4.63932   ACGCCCCCTTCCCAA            GAGGCTGC CACG GCAGCCTC             TTTTCTTGCGCCATC 100 43
    AHA_2645 2948412 .. 2948430 +   -16  -4.77157   TGCATAAACATAAAA             GGCGACCC TCA GGGTCGCC             TTTTTGCTGCCTTCA 100 55
    AHA_2650 2956060 .. 2956093 + -15.3  -2.62263   CGCTGGCTGTAAGCC     GCAAGGCGGGGCTTGC CTG GCAAGCTCCGCCC-GC     TCCTGTCGCCCCGCT  83 29
    AHA_2651 2957932 .. 2957950 + -13.8   -5.4505   AACCATGCTGAAAAA             GGGGGCCT TGC GGGCCCCC             TTTTTTATTCAGGCG 100 53
    AHA_2652 2959238 .. 2959269 + -20.2  -4.45485   CGCCCAGGCATAACG      AGACGCGCCCACCA TCAC TGGTGGGCGCGTCG       TTTTCTGCCTGTCAT 100 49
    AHA_2654 2961303 .. 2961332 +  -8.5  -2.72344   CCCTGCCGGCTGACG       GGCCGGCCTGGCGC AAG GT-CCAGGTCTGCC       TCGTTACCCCTGAAG  57 42
    AHA_2655 2963011 .. 2963029 + -13.1  -5.28176   TAAAACGAACAATCA             CGGGGCC TGGAT GGCCCCG             TTTTTTATCCCTGCC 100 106
    AHA_2656 2963477 .. 2963490 +  -2.3  -3.18446   TCAGGCCGACCGGGT               TGACG TGTA CGGCA                TGATTTTCTGCGGTT  43 78
        asnB 2965311 .. 2965336 + -19.1  -5.00616   TCCTTTGCCTCAATG         CCAAGCCCCTC CTGC GAGGGGCTTGG          TTTTTTCCCGCCGAC 100 54
    AHA_2658 2965993 .. 2966005 +  -5.5  -3.04461   AATCAGGGCCCCGCA                CGGTC GGT GACTG                TGTTGGGCCTCGATG  50 56
    AHA_2659 2966744 .. 2966781 + -26.3  -2.89742   TTGGCAGAGTGAACA   CGGCAGGCCGGGTCGGG ATGA CCGGGCCCGGCCTGCCG    TATGTCAGGGTTGGG 100 62
    AHA_2666 2974062 .. 2974085 + -16.8   -3.8969   CAAATTCCGACAGCA          CAAGGCCACC CGCG GGTGGCCTTG           TTGTTGTATGGATGG 100 43
    AHA_2671 2982337 .. 2982379 + -20.7  -2.89921   AACAGTAATCACGCA GCA-AGTCAGCCCGGCCGCC TCTG GGTCGCCGGGCTGACTATGC TCTGTGGGAATTGAT 100 33
    AHA_2672 2983659 .. 2983689 + -25.6  -3.87815   CGTCCGGATAGCAAA       TGCCCCGGCAACCA AGT TGGTTGCCGGGGCA       TTTCTGAAGATGGCG 100 55
    AHA_2674 2984635 .. 2984650 + -11.8  -5.06816   GCAGCTAATCAAACA              CCCCGC TTCG GCGGGG               TTTTTATTGGCACCT 100 33
    AHA_2675 NONE
    AHA_2676 2987315 .. 2987344 + -11.5  -5.55698   ATGCATCTAAAAAAA       TACCGCGC-CCATC CAA GATGCAGCGCGGTA       TTTTTTTACCTTGTC 100 31
    AHA_2684 2997330 .. 2997349 +   -15  -5.06414   CACGACACAAAAAAA            CGGGCACC CGCG GGTGCCCG             TTTTTGTTCAAAGCC 100 47
    AHA_2686 2999079 .. 2999099 + -18.3  -2.55015   AGCGACTTCATCCGA            CACGGCGCC AGT GGCGCCGTG            TGGCTTGCCTGCACT  95 118
    AHA_2687 NONE
    AHA_2688 3001851 .. 3001880 + -12.1  -3.14344   GGCATATCAGCTGAT       C-TTCGAGGGGGCC GCC GGCCCCCTCGCGCG       TTGCTCGCAGCCATC  76 62
    AHA_2689 3004685 .. 3004709 + -18.6   -3.9461   AGCAATGACCCGACA          CGGGACCGGC CTTGC GCCGGTCCCG          TTGTTATTGGCGGGC 100 92
    AHA_2692 3009544 .. 3009569 + -19.1  -3.32963   AACGCCAATAAAAAA         GCGCCGGATAC AGCC GTATCCGGCGC          TTGTCGACTAGACCT 100 75
    AHA_2694 3011638 .. 3011654 + -13.7  -5.00616   TATCGTCCCTCAAAA              GCCGGTC ACT GACCGGC              TTTTTTCGACCCGGA 100 53
        gltB NONE
        gltD 3041800 .. 3041821 + -17.3  -5.72616   AAACTGCCATGCAAA           CAGCCCCGC TCGT GCGGGGCTG            TTTTTTTATATCGCT 100 56
    AHA_2711 3047183 .. 3047203 +  -8.2  -2.60763   CTCGGCGCCCGGGTT            GCCCCGCT TGGCC AGCGGGCC            CTTGTAGGGTATCGG  53 240
    AHA_2719 3055493 .. 3055507 +  -4.2  -2.78384   GGCACCCCATTTTCC               GGATGG CAC CAATCC               TGTGGTGCCACACCA  45 158
    AHA_2720 3056742 .. 3056756 +  -2.1  -3.57462   AGCCTCTATCCCGGC               TCATG CTTCT CATGG               TTTGAAGCTCCAATA  47 316
    AHA_2726 3068267 .. 3068298 + -11.4  -3.66018   TCCCGAGGATCCGGC      GGCCGAGCCGCGCT GTTC AACCCGGCGCGGCC       TTGTTAAGGTGATCG  79 58
    AHA_2727 3069108 .. 3069131 +  -3.8  -5.00884   GGTCGCTCTGGGGAG          GCGGCTTGGAT ATA ATGCG-GCCGC          TTTTTTCCAAAGGAT  77 167
        rpiA NONE
    AHA_2729 NONE
    AHA_2730 3070068 .. 3070085 + -14.1  -5.20534   CCTTCGGATGCAAGA             CGGCGCC CCAT GGCGCCG              TTTTTATTGGTTGCT 100 45
    AHA_2731 3071517 .. 3071535 + -12.4  -5.31275   GCCGTCCAGCAAAAA             GCCCGTCG TGA TGACGGGC             TTTTTTATGCTGCGA 100 53
    AHA_2733 NONE
    AHA_2734 3073749 .. 3073771 + -11.3  -3.52316   CGTCTTCTTCAAAAA          GGCCCTCGGC TGAC GCC-AGGGCC           TTGCTTGTCTCTCAC  77 13
    AHA_2738 3076887 .. 3076900 +  -3.1  -2.77899   CACTCAATGACATTC               GATGT AATT GCATC                TGCTTGATAGACGAG  41 48
    AHA_2739 3078095 .. 3078112 + -12.7  -3.53012   GACGGCACCTGCAAA             CACCCGC TTCG GCGGGTG              TTTGCACAAAAAACG  85 56
      glgC-2 3079640 .. 3079658 +  -8.1  -4.83759   AACAGTCATAGCAGA             GGGAGTC ATAGA GGCTCCC             TTTTTACATTTGCTT  95 46
    AHA_2741 3080282 .. 3080300 +   -16   -5.4251   ACGCGCCAATAAAAA             GACCCGCC AGC GGCGGGTC             TTTTTTATATCTGAA 100 73
        yciH 3083777 .. 3083810 +    -6  -3.51365   CAAGACCTTTGACGG    GCCAGTGCCAATACCG GGGA CGG-AT-GGCGCAGGC     TTGTCTCAGGTATAA  57 209
    AHA_2746 NONE
    AHA_2747 NONE
    AHA_2748 NONE
    AHA_2749 NONE
    AHA_2750 3087868 .. 3087916 +    -6  -3.74747   CGCCCCCTGAGCAAG GCCCGCTACCTC-TCAC-CGCC AGTGCAC GGCGAGTGGCGATTTGGCGGGC TTTGATAACACTTGA  60 31
    AHA_2751 3088721 .. 3088750 + -16.5  -3.64466   GCTGAGGGGCGGCAT       GAAAAAGGGGCCC GCCG GGGCCCCTTTTGC        TTGTCTGTCTCGCCT 100 36
    AHA_2754 3094163 .. 3094182 +  -9.2  -5.07011   TATAACATATAAAAA            CCGCAGCC CAAG GGATGCGG             TTTTTAATTTCTATC 100 36
        ppiB NONE
    AHA_2758 NONE
        lpxH 3098328 .. 3098344 + -13.7  -4.90778   AGCAGCAATAAAAAA              GGCGGGA AGA TCCCGCC              TTTTGTTTGCCTGCG 100 52
    AHA_2764 3103815 .. 3103842 + -18.4  -3.66178   TCCGTTGAGACCACC        AGGCCGGGGGGA TGCC TCCCCCCGGCCC         TTTGCCGTTGAAGGA 100 33
    AHA_2765 NONE
    AHA_2766 3106896 .. 3106917 + -15.9  -3.82665   CAGCCCAACAATAAA           GAGGGGAGC CCAG GCTCCCCTC            TTTCATCATCTCGTC 100 83
    AHA_2768 3111109 .. 3111128 + -13.6  -3.99957   GACCAAAAACAAAAA            GGCCGCTA TTGC TAGCGGCC             TTTGTAAGTCTTTGA 100 215
    AHA_2780 NONE
    AHA_2781 NONE
    AHA_2782 3124358 .. 3124381 +   -21  -4.72272   TCAGAAAATGAAAAA          GCCCGCCGGG TCTC CCCGGCGGGC           TTTTTACTGAACGGA 100 49
        dinG 3130551 .. 3130565 +  -4.2  -3.15574   CCGAGAGGCAACCCA               GGCG CCATAAA CGCC               TATTGCTGCCCTTGG  47 105
    AHA_2787 NONE
    AHA_2788 3132350 .. 3132371 + -17.3  -4.06687   ACCGTTGCAAACAAC           GAGGCGGCC CTGG GGCCGCCTC            TTCTTTATACCGGGT 100 90
    AHA_2791 NONE
    AHA_2792 3138081 .. 3138109 + -26.1  -2.71364   CTCGGCCTGTAAACG        GCAGGGCCCGGCA GGG TGCCGGGCCCTGC        TCATTCGAGCGATCC 100 29
    AHA_2793 3138812 .. 3138837 +  -4.5  -2.97475   GATTTCTTCGACTGA         CGGGACGCCCC GAAT GGGGTGAGCTG          ATTTGTGCTGACGGG  46 26
    AHA_2794 3139752 .. 3139772 +  -2.5  -3.79295   CCGACAGCGAGTCGT            TCGGGGG CATCGCA TTCCCGA            TCTGTTTTTTTCGTA  52 154
         rnk 3140374 .. 3140390 +  -3.5  -3.26444   TGCTTTCTCTTGAGC              CCGGACG AGG CGGCAGG              TATCTTGTTGGCCGC  47 148
    AHA_2796 3141016 .. 3141048 +  -3.9  -2.89191   GCTGGCCCACCGCAT      GCTGGACAGCTGGTG ATC CCCCGTCTTGCCAGC      TATGTCGCCATCTCG  44 10
        uhpB NONE
    AHA_2798 3143897 .. 3143936 +  -7.1  -4.62069   CGCGCCCCCGCGACG CCGG-TTGACCGGCTAGGC TTGC GCC-AGCCGGCAGACCCGG  TTTTTGCCCTCCCGC  78 18
    AHA_2800 NONE
    AHA_2801 NONE
    AHA_2802 3148134 .. 3148164 + -24.2  -3.95073   CGCCAGAGGTATAAA       CAGAAGAGGGAGCC CAT GGCTCCCTCTTCTG       TTTATACCTCTGGCG 100 44
    AHA_2805 3150764 .. 3150787 + -18.2  -3.19192   CGTCGCAGACAAAAT          GAGAGCGCCC CCTT GGGCGCTCTC           TTGCATTGGATCACC 100 66
    AHA_2815 3162244 .. 3162267 + -15.4  -5.49729   CAATTTCCCCGAAAA          TAGCCCAGTC TCGC GACTGGGCTA           TTTTTTTGCCTGCTT 100 39
        aceB NONE
        aceA 3166417 .. 3166435 + -17.4  -5.04249   CTTGAGATAGCAAAA             CCCCGGCC ACT GGCCGGGG             TTTCTTTTTTGAAAG 100 65
        purM NONE
        purN 3171254 .. 3171277 + -16.8  -3.09116   GCATGCAAAATAGAA          CAAGGGAGGC CCAG GCCTCCCTTG           TCATTTCTATCTACC 100 53
    AHA_2828 NONE
         ppk NONE
    AHA_2830 3181742 .. 3181759 + -12.7   -4.4267   CGGCGAGACAAAAAA             GGCAGCC CACG GGCTGCC              TTTTACATTTTCGGG 100 49
        flgA 3197009 .. 3197025 +    -3  -3.02537   CCGTGGTGGTCACCT              TCTGAG TGTTT TTCAGA              TCACTTTTTTTCTAA  43 21
        flgM NONE
        flgN 3198155 .. 3198165 +  -6.8  -3.28924   AGCGCCGACCATCCA                 CCAG CAT CTGG                 TTGTAAGGGGCGGTG  55 343
    AHA_2850 3201317 .. 3201333 +  -2.1  -3.63515   CGCCCACCCGCTCCC              GGTGCAG TCC CACCACC              TTGTTGCCGATGGCG  49 126
    AHA_2853 3203505 .. 3203522 + -10.5   -2.5176   TCAGCTATCGATAGT             GGCCCGT CACA GCGGGCC              CTCTCTTCTAGCTTA  65 239
    AHA_2855 NONE
    AHA_2856 3207749 .. 3207764 + -10.4  -3.85698   TGACGGGCCCCACCA              GGGGCA GCTG TGCCCC               TTTATGACCGGCAAG  80 38
    AHA_2857 NONE
    AHA_2858 3209571 .. 3209599 +  -3.7  -3.90744   GCGGCCGGCTGCGCT        GGTTCAAGCCGCA GAC TGCAGCCTGACTC        TTATTTGCCCGCCGC  56 0
    AHA_2859 3211589 .. 3211610 +   -13  -5.40474   CGGCAGATAGAAAAA           GACCCCGC ACACTG GCGGGGTC            TTTTTTTGCAACCGT 100 46
    AHA_2863 3213578 .. 3213602 + -15.7  -4.28069   GTCCATAAACAAAAA          GCCGTGGAACC AGA GGTACCACGGC          TTTCTTAAATTCTGT 100 396
         tus 3220482 .. 3220511 + -20.9  -2.87344   GCACGAGCCAAATAA       CAAGGGGAGCATC ATTG GATGCTCCCCTTG        TCTGTAGCCCGAGTC 100 91
    AHA_2912 NONE
    AHA_2913 NONE
    AHA_2914 3277449 .. 3277493 + -18.1  -3.93367   CGCCTGATAGAGCAA GCAGATAAAAAAACGGGAGCC ATC GGCTCCCGTTTTTTTATTAGG TGTTTTCTTCCGGCG 100 34
        trpE NONE
    AHA_2924 NONE
        trpD 3286818 .. 3286828 +  -6.8  -2.70932   ATGTCAGCCACGACT                 CTGC ACA GCAG                 TCATTCAGAACGCCC  52 40
       trpCF NONE
        trpB NONE
        trpA 3290413 .. 3290443 + -11.2  -5.37865   CATTGACCATGTCTG       CAAAAAGGGAGCCT GAT AGGCTCCCTTTCTA       TTTTTTGCTTGTTGC 100 62
    AHA_2929 3292496 .. 3292535 +  -8.6  -2.62545   TCAAAAATATAGCAA  GGTGCTCAACCGGATAG GCTAAAG CTCTCCGGT-GAGCCCC  AATTTTTAGCATCTA  56 43
    AHA_2931 3294372 .. 3294400 + -14.6  -2.78327   CGCCGCCATGCTGTT        CAGACCACCGGC CTTGC GCCGGTGTTCTG        CTTTGGGCCTTTCAT  83 70
    AHA_2932 3295102 .. 3295119 + -11.3  -5.10154   TTCGCCATAAAAAAA             CCTCTGC CCAG GCAGAGG              TTTTTGCTTTTCGAT 100 60
    AHA_2935 3298689 .. 3298705 + -10.8  -5.18371   CCAGCCCCTAACCAA              CCCGCC CAACC GGCGGG              TTTTATTTTATCCGC 100 102
        tauA NONE
        tauB NONE
        tauC NONE
        tauD 3302451 .. 3302508 +  -2.2  -4.19746   ACCAGCCCTTGCACC T-ACCGGTTGCGC-CGCCGTTATT GATCCCGCATAA AATAACGGTGCGCGTTGCCGGTCA TTATTTTCAAATAGA  56 48
    AHA_2940 3304392 .. 3304410 + -13.8  -3.96148   ACTGCCCAACAAAAA             GCCCGCCG AAT TGGCGGGC             TTTCTCATGCAGGCA 100 73
    AHA_2947 NONE
    AHA_2948 3314640 .. 3314660 + -18.3  -3.89212   CCGACCATAACGAAA            CGGGCCTCC AGT GGAGGCCCG            TTTGCTATGTGAGTG 100 47
    AHA_2951 3317330 .. 3317346 + -15.1  -3.35679   AGCAGGCACAAAAAA              GCCGGGC AGT GCCCGGC              TTCTGGGTCGACAAG  95 408
    AHA_2954 NONE
    AHA_2956 3322511 .. 3322522 +  -5.8  -2.94354   GCAAAGGGAGGAGAG                TGGC GATG GCCA                 TGTGTCGATATCTGG  51 75
    AHA_2957 3323488 .. 3323521 + -13.1  -3.19192   CGTTGAGCCCGCTAT     GGCGGGCGGCC-CGTC CCG GATGTGGCCCCTCGCC     TTCACTTGCATCCAC  83 35
         xth 3324410 .. 3324428 + -10.2  -2.87132   GATAACGACAACAGA             GGGGGCAT TTG AAGCCCCC             TCTGTGACCAAGCCC  68 39
    AHA_2959 NONE
    AHA_2960 3329079 .. 3329097 + -17.4  -5.60993   AAGTCGTAAGTCACA             GCCCCCGC CAT GCGGGGGC             TTTTTTTATCCGCCA 100 32
    AHA_2961 3329943 .. 3329962 +  -9.2  -3.40403   GCCAGCCGTCCCTTC            GCCTCCCG CGCA CCGGAGGC             TTGTCATGAACAAGA  66 284
    AHA_2962 NONE
    AHA_2963 3334691 .. 3334702 +  -3.6  -3.33744   CCCGCCGGCTAACCC                GGTG GCAG CGCC                 CTTTTTGACAACCAA  49 29
    AHA_2964 3335131 .. 3335149 +   -16  -5.13722   CATTTCAATAAAAGA             CGGCGGGA TCA TCCCGCCG             TTTTCTTTTACTGCG 100 48
    AHA_2968 3342039 .. 3342062 + -16.8  -2.96274   GAACGTGTGAAGCGA          GAAGGGCCAC CGAA GTGGCCCTTC           TGTCATTGTGCGCCC  93 60
    AHA_2974 3347842 .. 3347865 + -18.2  -3.80573   CAGAAGGTGGAACGA          GGGCGGTGAG GGTG CTCACCGCCC           TTTCATCGTCCTGGC 100 66
    AHA_2975 3348613 .. 3348633 + -18.3  -3.70076   GCACGACTGATATCC            GGGGCCAGC CAT GCTGGCCCC            TTTCAATCCGTTTCA 100 45
    AHA_2976 3349549 .. 3349582 + -22.6  -4.11216   TCCGCCATTGAAAAC     GCAAAAGCCCCGCC ACTGCC GGCGGGGCTTTTGC      TTTTCAGGATGCGGG 100 49
        ppnK 3361678 .. 3361696 +  -2.3  -3.29043   GCTGCGCAACAAGCT             CGGCTGG GGCAG CAAGCTG             TTCTGACCCACGCTT  43 1
        recN 3363529 .. 3363558 +  -7.1  -3.60792   TGAGGATCGGGTACC       CCGC-GTAACCCAG CCC CTTGGTGACGGCGG       TTTGCGGCTTAGCGG  60 76
    AHA_2987 3364956 .. 3364993 + -12.5  -2.93623   CGAGCAGATCTGACC   CCAGGCGGCGGGCCGGC CTCT GCCGGCTTGCCGCCCAC    TCCTCTTTTCAGCCC  79 28
    AHA_2988 3365761 .. 3365787 + -19.5  -3.03243   GTCGGTTGATGACCG         GGGTGCCCACC CGCGA GGTGGGCACCC         TGTTGCCAGCTCCCT 100 32
    AHA_2989 NONE
    AHA_2990 NONE
    AHA_2991 3370448 .. 3370488 + -14.1  -2.73799   TCGCAGCTGACCCGC  CTTGTCTCATGCCCTCG CACCGCT CGAGGGCATGAGACATC  TCCCTTATTTCTCCC  83 31
    AHA_2992 3371413 .. 3371429 +  -6.5  -4.46926   GTCACGACGTGATGG              ACAGCTG AAT CAGCTGA              TTTTGTCCTGAAATA  75 18
    AHA_2993 3372803 .. 3372827 + -14.4  -4.18908   AACGAGCATCGGCAA          TAAGGCTCCC ATAAC GGGAGCCTTA          TTATTTTGCCGATAT 100 40
    AHA_2996 3375321 .. 3375350 + -20.9  -3.87869   AAGAGCCCATATAAA       GAAGAACACCGCC AACT GGCGGTGTTCTTC        TTTATGCAAGGTTGG 100 39
    AHA_2998 3377414 .. 3377446 +  -6.9  -3.13403   GCCTGCTCTTCGGGC      TCAGCGCTACCGGCA TGG TGCTGGTGGGCCTGG      TGTTCATCAACAGCC  54 59
    AHA_3001 NONE
        gabT 3383409 .. 3383431 +  -4.8  -2.52464   TGGCGCCCCCTATGC           CCAGGTTGAT ACC GTCAGCCTGA           TCCCTTCGGCCCGGA  43 329
    AHA_3003 3384825 .. 3384845 + -15.4  -5.76949   TTCTTTGCGTTCACA            GCGCCCGC CCTCT GCGGGCGC            TTTTTTTTACCCCTG 100 44
    AHA_3004 3386683 .. 3386706 + -16.8  -3.25823   AGACGCACAAATGCA          GAAGGGGAGC CATG GCTCCCCTTC           TTGCTGTGCACGCCG 100 52
    AHA_3006 3388671 .. 3388683 +  -4.8  -3.54424   AGATGACGCTCTCAC                TGCC CTCTC GGCA                TTTCACGACATAGGG  52 158
    AHA_3007 3389357 .. 3389376 + -12.1   -3.4252   CTCCGCCTTTCTCAG            GGCCGGC CATTGC GCCGGCC             TTGTCATGAGTAAAA  80 206
    AHA_3008 3390358 .. 3390377 + -10.7  -4.82901   CCAGACAGCGCAAGA            TGGCGGG TCGCTT CCCGCCA             TTTTTATGGCGCCGG 100 53
    AHA_3009 3393741 .. 3393758 +  -4.8  -2.99717   TCGAGCAGACCAATG             CCGGCGC ACTGA GC-CCGG             TCTGATTATCTGGGT  46 3
    AHA_3012 3397290 .. 3397320 + -14.1  -4.42653   TTATGACGCCATCTT       TCTGAGCCAGCCA TTAAT TGGCTGGCTCACA       TTTTATCCCTCCCCT 100 51
    AHA_3014 3400506 .. 3400533 + -15.8  -3.31726   CACGCTATCGATCCA        TAAAAAGAGCCC CGCA GGGCTCTTTTTA         TATTGTCTCCCCCAC 100 45
        aceK 3411116 .. 3411133 + -12.7  -4.27316   GTGCAAATAGCAAAA             GGGACGC CGTG GCGTCCC              TTTTGCGTTGGGCCG 100 70
    AHA_3023 3412572 .. 3412582 +  -2.4  -2.57243   GCCGGTTGACCAGCT                 CCCG CAC CAGG                 CTGTTGTCCTCATAA  38 363
      arcA-1 3414291 .. 3414319 + -16.1  -3.87869   CCTCCCTCCCCCGAG        TTGAAAAGGCGCC GAT GGCGCCTTTTCCA        TTTCTGCGCCATTCA 100 42
    AHA_3029 NONE
    AHA_3030 3418506 .. 3418534 + -18.9  -2.79133   CATACGGCTAAAAAT        GGGGCTGGTCGAC ACC GTCGACTGGCCCC        TATAATGGCCCCTTC 100 160
    AHA_3031 NONE
    AHA_3032 3419435 .. 3419452 + -11.3  -4.58773   ACGCCGAAAAGAAAA             GGGCATC TCTC GATGCCC              TTTTGCTTTGCTGCG  95 49
    AHA_3034 3421434 .. 3421449 + -10.4   -5.5604   CCAGCCATAAAAAAA              CCACCC GTTC GGGTGG               TTTTTTGTTGCTTGC 100 42
        cysK 3425827 .. 3425846 +   -15  -4.56367   ATTATTTCAAAACAA            CGGCGCTC CCAG GAGCGCCG             TTTCTTTATGAGCTA 100 49
        ptsH 3426494 .. 3426509 +    -9  -4.24342   TGCCCTGATGGACGA              GCTGGA GTAA TCCAGC               TTTATTCCTCCCCCA  84 16
      ptsI-2 NONE
         crr 3428852 .. 3428898 + -16.1  -4.11216   GGGCCGAGCGCCCGT CGCCGCAACAAAAAACCGAAGC CCTG GCTTCGGTTTTTTTATG-GGCG TTTTCCGGCTAGGCC 100 49
    AHA_3044 3431539 .. 3431569 + -19.9  -3.19463   CGGGTTGCACACCAA       CAAGAAGGCCCCT TTGAC AGGGGCCTTCTTG       TTCATGGATGGTGAG 100 50
        rdgC 3438314 .. 3438327 +  -9.5  -5.60993   CCTGATTGCAAAAAA               CCGCC TCTG GGCGG                TTTTTTTATGGGCGC 100 55
    AHA_3049 3440280 .. 3440295 + -11.8  -5.55769   AACCCCACGCAGCGA              GCGGCC AGTC GGCCGC               TTTTTTGTTCTCCAC 100 63
    AHA_3050 3442292 .. 3442309 + -12.7  -4.92363   CCATTCAGTGAACCA             GAGGGGC CTTG GCCCCTC              TTTTTATGCCTCTTT 100 45
    AHA_3051 3443886 .. 3443906 + -16.9  -3.89212   ACGCATCCAAAACAA            GAGGGAGGC CAA GCCTCCCTC            TTTCGTCTCTGCGTC 100 58
       pyk-3 3445892 .. 3445909 + -14.1  -6.02914   TGAACAAGCTGAAAA             CGGCGCC TGCG GGCGCCG              TTTTTTTTATCTGCC 100 48
        kefA 3449366 .. 3449381 + -11.8  -5.31877   ACCATGCCACTCGAA              GGCCCC GCAA GGGGCC               TTTTTTATGGTCGGT 100 49
    AHA_3054 NONE
    AHA_3055 3451500 .. 3451525 + -19.1  -3.82218   CGCACCGACAAAACA         GAGAGGCCACC CTGG GGTGGCCTCTC          TTTCATCATCTCAAT 100 68
    AHA_3057 NONE
    AHA_3058 3454779 .. 3454800 + -11.5  -2.79749   CTCAGGTAACAAAAA           AGGGGTGGC CATG GCCACCCCC            CTTCTATTGCAAGTG  69 44
    AHA_3060 3457934 .. 3457951 + -14.1  -4.05193   GGCAGACACAACAAA             GGGGCGC CGCA GCGCCCC              TTCTTCTCTTTCATC 100 43
    AHA_3070 3468851 .. 3468865 +  -2.8  -2.91264   GAGTTGATGAGTACC               CAGC AGATCGC GCTG               TATCTCGATCAGACC  42 50
    AHA_3071 3469809 .. 3469834 +  -7.5  -5.28176   CTCGCCCGTAAAAAA         GCCCGCCAAGA CCAA TATTGACGGGC          TTTTTTGTGCCTCAC 100 52
    AHA_3074 NONE
    AHA_3075 3475353 .. 3475363 +  -2.4  -3.24924   GAAGAACTGACCATG                 GCGC AGC GCAC                 TATTATCCATAACCA  43 31
    AHA_3076 NONE
        mobA NONE
    AHA_3078 NONE
    AHA_3079 3479638 .. 3479656 + -17.4  -3.50853   CCACCCATAGCAAAA             CGCCCCGC AAA GCGGGGCG             TTGTCGTTAAAAGGC 100 31
    AHA_3089 3487612 .. 3487628 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  62 248
    AHA_3092 3491359 .. 3491386 +  -9.8  -6.22802   TCCACCGCCCAATCT        GCGCCCTGGC TCACACTT GCCAGGGCGG         TTTTTTTTTGTGCAG 100 43
    AHA_3093 3493437 .. 3493456 + -10.6  -3.01924   ACAGCTAATCAATCC            CGGCCCCC TGCG GGGGGCCC             TCTTCCCCGCCCATC  69 33
    AHA_3094 NONE
    AHA_3095 NONE
    AHA_3096 NONE
    AHA_3097 3497511 .. 3497539 +  -3.6  -2.52464   CGTCCGGCCACGCCT        CGCCACGGGGCC GTCAG GGCCCCGCAATG        TGCCTTGCCACGCCA  42 59
    AHA_3098 NONE
    AHA_3099 NONE
    AHA_3100 3502225 .. 3502242 + -14.1  -5.81032   TTATCTTTTTTCCTT             GGCGGCC CGAT GGCCGCC              TTTTTTTTACGATTC 100 43
    AHA_3101 3503995 .. 3504025 + -24.2  -3.62775   CATTTGCCAGCCACC       CGACAGAAGCGCCA CAA TGGCGCTTCTGTCG       TTATTGACGAGTGAT 100 43
    AHA_3102 3504653 .. 3504669 + -13.7  -3.45324   ATCCGAAAACAAAAA              GGCCCCT GCG AGGGGCC              TCTTTCATCAGAGTG  79 277
        astB 3509059 .. 3509076 + -14.1  -5.05577   GACGCCATCAAAAAA             GCCGGGC AAGT GCCCGGC              TTTTTCATTTGGTTT 100 65
    AHA_3107 3511151 .. 3511167 + -13.7  -3.03124   GGGTTACATTCAATA              GGGTGCC GTC GGCACCC              TGTTGCAACATCCGC  84 74
    AHA_3108 3512276 .. 3512292 +  -2.1  -3.01712   CGCCCCCGCCATGAT              GGAGCCG GTG CGGATGC              TGTTGGCGAACAGGG  41 215
    AHA_3110 NONE
    AHA_3111 3516299 .. 3516320 + -15.9  -5.31519   ACAGCCACAACGACA           GAGGCCACC CAAG GGTGGCCTC            TTTTTGTTTCGATAT 100 50
        purA 3518730 .. 3518748 + -14.6  -5.60993   CAGCACAGTAAAAAA             CCGGCATC CAG GATGCCGG             TTTTTTTATGCCCGG 100 58
    AHA_3114 NONE
    AHA_3115 NONE
    AHA_3116 3522968 .. 3522986 + -11.7  -4.30719   ATGAGCCAACAAAAA             GGCCTCC GCAAG GGAGGCC             TTTCTTATGGCGCCG  93 56
    AHA_3118 3525721 .. 3525738 +  -3.3  -2.90956   ACCAGAATACGGCAT             GGGATCG GGGC CGCTTCC              TCTCTCACGTACTTT  42 106
        anmK 3526892 .. 3526921 + -17.9   -3.8647   CTGCCTGACCCAATA       GAGCAGGGCCGTC ACTC GACGGCCCTGCTG        TTTCATCTCCTGCCT 100 33
    AHA_3121 3528390 .. 3528400 +  -8.2  -3.65902   GCCACCTCATAGAAA                 CCGG ATC CCGG                 TTTGCATCCGCTGGC  68 321
    AHA_3122 3529951 .. 3529973 + -15.6  -5.14563   TTTAAATAATAAAAA           GAGACCGGCT AAT GGCCGGTCTC           TTTTTTGGTAACAGG 100 48
        metK 3534405 .. 3534421 + -13.7  -4.48987   CGCTTGTGGTATAAA              GGGGAGC CTG GCTCCCC              TTTTGCTTGTCCGCC 100 47
        sprT NONE
    AHA_3126 3535766 .. 3535780 +  -8.6  -3.38812   CATCTATGGACACAA               GGGATT TAA AATCCC               TCTTCTTGAACCAGA  64 44
    AHA_3127 NONE
        gshB 3537663 .. 3537683 + -18.3  -4.57755   GAACGGTAATAAAAA            GAGGCGGCC CCG GGCCGCCTC            TTTTCTATCCTGCCT 100 78
    AHA_3130 3540028 .. 3540048 +  -8.2  -4.09864   ACAGCTGATGCCGTT            TGCCACGC ATTTC GCGAGGCA            TTTTGAGGAATCAAT  77 33
    AHA_3131 3540492 .. 3540531 + -12.1  -2.88579   GCAGTACGGTTGACA  GACG-GGGGAGAGGCAGG TCAAT CCTGCCCCTCCCCATGCC  TGTATCAGGCCTTGG  75 28
    AHA_3136 NONE
    AHA_3137 NONE
    AHA_3138 3551170 .. 3551188 +   -16  -3.78934   AACTCCCAAACGAAA             GGGGAGCC AGT GGCTCCCC             TTGTTGTCAGACAAC 100 220
         tal 3554381 .. 3554404 + -18.2  -5.75342   ATGAGCCGATGAAAA          CCGGGTTCCC GCAA GGGAACCCGG           TTTTTTTTGGACGCC 100 52
    AHA_3143 3557370 .. 3557385 + -11.8  -5.66684   CGGTATCATGAAAAA              CGGCCC AAAC GGGCCG               TTTTTTTATGGCTTG 100 57
        lolB NONE
         ipk NONE
    AHA_3153 3566263 .. 3566274 +  -5.8  -3.02144   GGTATATCGATTCAC                CTGC CGCA GCAG                 TCTTGCCGGGAGTGC  52 60
    AHA_3154 3567499 .. 3567528 + -19.5  -4.73388   GATAGACCCTGTTGT       GACAAAAACCGCC AGCT GGCGGTTTTTGTC        TTTTTAGTCCCAGTT 100 39
    AHA_3155 3569609 .. 3569629 + -15.4  -4.28361   CGGCAAGCCACACCA            CGGGCCCC ACGCA GGGGCCCG            TTTTGCTGCCGTTGG 100 55
         pth 3570439 .. 3570452 +  -2.4  -2.57344   AAGAACCTGTTCATG               CTCT GTAACG AGAG                GTTGTCAGCAAGGTA  38 91
        ychF 3571708 .. 3571729 + -15.9  -5.08824   CGTCTAATCCCATGA           GAGGCCAGC ATTT GCTGGCCTC            TTTTTTAACTGGCCA 100 34
    AHA_3158 NONE
    AHA_3159 NONE
    AHA_3160 3572314 .. 3572328 +  -3.6   -3.8381   TCCTAGTGCCCCAGC               CATTTT TAA AAGATG               TTTGATAGTCTCTGT  56 24
    AHA_3161 NONE
    AHA_3162 NONE
    AHA_3163 NONE
    AHA_3164 NONE
    AHA_3165 3572893 .. 3572906 +  -8.1  -5.71712   GCAGTACCAAACAGA               CCAGC TCAG GCTGG                TTTTTTTGTATCCGG 100 47
    AHA_3167 NONE
    AHA_3168 NONE
    AHA_3169 NONE
    AHA_3170 3577821 .. 3577831 +  -3.2  -3.15407   AGCCGGATTTGGTCT                 TTGC CGA GCGA                 TGTGTTAATAGTGTC  43 40
    AHA_3171 3578288 .. 3578305 +  -2.6  -2.79796   TAACCCGTTTCTTTG             CACAGC ATCATC GCTGAG              TGTCGTGCCATCCCG  39 38
    AHA_3172 3580149 .. 3580173 +   -10  -2.79327   CGCGCCATCCTCCGC         CA-CGGGGGGC CCCT GCCCCCTGATG          ATTTCCCTCCCCTCG  64 58
    AHA_3173 3582422 .. 3582439 + -12.7  -4.88736   CAAGGCGATTCAAAA             GGGCTCC TTTG GGAGCCC              TTTTTATGGCTGATG 100 131
      nifJ-2 3586371 .. 3586394 + -18.2    -3.322   AGACCCACCAACAAA          CAGGGCTCCC CATG GGGAGCCCTG           TTGCTATGTCGCCGT 100 47
    AHA_3176 3588584 .. 3588602 + -11.7  -4.18018   TGCCACCAATGAAAA             CGCCTCC GCAAA GGAGGCG             TTTTGCATGCAGCAG  91 54
        mrcA 3609498 .. 3609524 + -15.2  -5.27923   CACCGCAGAAGATAA         AAAAACCGGCGC AAT GCGCCGGTTTTC         TTTTTTGTGGCCTTG 100 43
    AHA_3200 3615108 .. 3615123 + -11.8  -3.57119   TGCAAACATGCGAAA              GGGGCC GGCA GGCCCC               TTTCGCGCATATGTC  81 60
    AHA_3202 3617055 .. 3617069 + -11.4  -3.18582   CTGGCCAGCCAGTCC               GCCCTC GCC GAGGGC               TTCATCAGTCGCCTG  74 114
    AHA_3203 3617871 .. 3617886 + -10.4  -4.72272   GCTCAAAACGAAAAA              GGCAGC CTAG GCTGCC               TTTTTGATGGCCGAA 100 62
    AHA_3205 NONE
    AHA_3206 NONE
    AHA_3207 3625441 .. 3625457 + -10.8  -5.60993   TCAACCGCAATCAAA              GGGGCC ACACA GGCCCC              TTTTTTTATAGAAAA 100 41
        frdA NONE
    AHA_3209 NONE
    AHA_3210 NONE
    AHA_3211 3629362 .. 3629378 + -10.8  -5.64274   TGACGCAATGACAAA              CCGGGC CAAGT GCCCGG              TTTTTTTATAGCTCC 100 49
    AHA_3213 3631028 .. 3631044 + -10.8  -3.75738   ACCGCCATAAAAAAA              CCGGGC GCCAG GCCCGG              TTGTTGATGCTGGTC  76 136
    AHA_3217 3634727 .. 3634748 +  -2.3  -3.02144   CCTGTTCAACTGCCC           GCATCG-GAG CGC CTTATGATGC           TGTTCGACCAAATCG  42 7
    AHA_3218 NONE
    AHA_3219 NONE
    AHA_3220 NONE
    AHA_3221 3638376 .. 3638409 + -13.9  -3.63922   AGAGCGCTATTTAAA     CTCTGCCCACCAG CTTGCATA CTGGTGGGCAGCG      TCTTTTGAGGGGAAT  89 55
    AHA_3222 3639097 .. 3639141 +  -2.5  -3.24747   GCTTGAACAAGCCCA GCGCCGGGACCACCGGGCATG ACG CGTCCCCGCTCCATCCGCCGC TTCCTGCTCTCCGGC  43 4
    AHA_3223 3640559 .. 3640599 + -19.9  -3.19192   GCCCTGCCTGATCAT  CACCATAAAAAACGGGGGC CAG GCCCCCGTTTTTTATGTCG  TTCGCTTCCCTCAGC 100 30
        guaC 3642611 .. 3642634 + -11.7  -5.76633   TTAGAAGCCAGTCAA          CCGGTGTGC TACCCT GCGCACCGG           TTTTTTTGTATCTGG 100 71
    AHA_3226 3643858 .. 3643874 +  -2.9  -2.74094   TGAAATTTTTAGAAA              GCCGTAT ATA ATCTGGC              AGTTTTTATCTGCCC  41 15
         efp 3644507 .. 3644523 + -13.7  -5.64274   ATCCATGGTAAAAAA              GCGAGCC TTT GGCTCGC              TTTTTTTATGGGTGC 100 54
    AHA_3228 3645271 .. 3645322 +  -3.6  -4.03888   TTCCCCCTTCAGAAA ACCGGCC-TGGTGCCGCTAACCCG AGTAAC CGGGGGAGCG-CACTATGGCCAGA TTGTTCTTATCACTG  58 50
    AHA_3229 3646135 .. 3646145 +  -6.8  -3.39018   GCAGCAAACTGGCTC                 TCGG TCG CCGA                 TGTTTGGCATCATGA  58 94
    AHA_3230 3647162 .. 3647185 + -18.2  -2.77899   CGCCGACCCAAACAA          GAGAGGGGCC TGTC GGCCCCTCTC           TCATTGCTGGCAGCG  95 47
    AHA_3233 3650347 .. 3650365 + -13.1  -5.18726   TCGTCCACCACCCAA             GCCCCCG CTCGA CGGGGGC             TTTTTGTTGTCAGGC 100 46
    AHA_3236 3652382 .. 3652406 + -12.1  -2.77013   AGGCGGCCGGCAGCG          CGCTGCAGCTG ACG CAGTGGCAGCG          ATTCTTGCCCCCCTG  72 114
        miaB NONE
    AHA_3242 NONE
    AHA_3243 3659275 .. 3659310 +  -7.5  -2.62184   GAAGAGTAAAGAACC    GGATGGTCATCGTCT TGAAAC AGCCGACGCCCATCC     TCATATAGCCACAAC  54 32
        corC 3660262 .. 3660294 + -15.6  -3.53012   AAGCCTTGACCCTTG      CCAACAGCGCCCCG CCCGT CGGGGTGCTGTTCG      TTTGGCCGCACGCCC 100 39
         lnt 3662038 .. 3662061 + -18.2  -3.70446   CAACCCGATAAATGA          GAGAGGCGCC CAAG GGCGCCTCTC           TTCTGTTCAGTCTGA 100 51
        leuS 3665508 .. 3665530 + -11.9  -3.16676   AGCAAACGGATGATA           ACGGCGGGC CCTGC GCCCGCCGC           TCTTCACTTCATGCA  78 92
        rlpB NONE
    AHA_3249 3666208 .. 3666218 +  -3.2  -3.59979   TCAACCAGGCCAGGT                 TCTG ATG CGGA                 TTTACCCTGAACAAC  49 21
        holA NONE
        nadD 3667984 .. 3668014 +  -8.8   -3.0634   CTATAGTGATCAACA       GGGGGCGAGTTTGC CAA GCGGGCACGGCCCC       TGTTCCACTCCCCTT  63 81
    AHA_3252 NONE
    AHA_3253 3668944 .. 3668954 +  -2.4  -3.03124   CGTATCACAGAGAGT                 GAGC CAT GCAC                 TATTCCAGCATCACC  42 24
    AHA_3254 NONE
        mrdB NONE
    AHA_3256 3672183 .. 3672209 +  -2.1  -2.89563   ATCCAGACCCACAGA         AGGCTGCTCGC CTGAT GCGACTGGCCG         GTTTGCTGCTCTCTC  40 11
      mltB-2 NONE
        rlpA 3674197 .. 3674215 +  -6.6  -3.53444   TGGATAAAAAACCAG             GCCAGATG GCA CGTCGGGC             TTTGACCGACGGTCG  60 120
    AHA_3259 3675509 .. 3675534 + -16.1  -3.41366   CACAAACCTGACCAA         ACAGCGGCGCC AACA GGCGCCGCTGC          TGTCTTTTGCGGTCG 100 47
    AHA_3260 3676050 .. 3676077 + -11.2  -3.90744   GTCCTGTAAGTCGCC        TCTCTCGCCCCG CCAC CGGGGCGACTGA         TTATTTGCCAGCCGG  82 32
        lipB NONE
    AHA_3262 NONE
        lipA 3677919 .. 3677936 + -12.7  -5.28176   CCCCCGGTCAAAAAA             GAGCGCC CAAG GGCGCTC              TTTTTTATGGGTCGG 100 49
    AHA_3264 3678632 .. 3678659 +  -3.2  -4.23213   ATATGATGAGGCCGC        CCCGGCCTGCGT CGCT GCGCACGCCCTG         TTTGTTCCCTGTCGC  62 101
    AHA_3265 NONE
        mscL 3685678 .. 3685691 +  -9.5  -5.52384   TGTATTCGAAAAAAA               CCGCC TTCT GGCGG                TTTTTTTGATACCAG 100 57
    AHA_3274 3687407 .. 3687420 +  -3.7  -2.71364   GGTGCTGGCCGTGCA               GCGCC TTGA GCCGC                TCGTTGGCCACGTGG  42 51
    AHA_3275 3689187 .. 3689200 +  -3.7  -5.32882   TCGGTATCATCGCAT               GACGC TATA GCGAC                TTTTTTGTGCTGGTC  86 229
    AHA_3276 NONE
    AHA_3277 3692078 .. 3692097 + -16.4   -5.1287   GCTCCCCACCCAAAA            GCGGCGCC ATCA GGCGCCGC             TTTTTTAGCTCTGGC 100 67
    AHA_3278 3692630 .. 3692655 + -19.1  -2.53015   CAGTGCCAGAAACAA         CAACGGCGACC TCAT GGTCGCCGTTG          TGCATTAGCCAGTCT 100 51
    AHA_3284 3699948 .. 3699965 + -14.1  -4.43879   AGAGCAGATAAGCAA             CGGGGCC CGCA GGCCCCG              TTTTCATTGGATCGT 100 50
    AHA_3288 NONE
    AHA_3289 3707946 .. 3707970 +  -6.3  -3.80573   GCGCTATTCCGGCGC          CCGCGGCTTGC AGC GCAAATCGGGG          TTTGCTAATACTCCG  63 171
        lytS NONE
    AHA_3291 3710451 .. 3710474 +  -5.2  -2.63631   CTGGAGATCCCCTGA          GGGGCGGG CCACTCAC TCCGCTCC           TGCTCTGCCCGTTAC  46 26
    AHA_3292 3712492 .. 3712515 + -16.8  -3.12668   CATCCGCTGCAACCA          CAAACCCCGG CATG CCGGGGTTTG           TTGCATCTGGCGGTC 100 43
        pepE 3713423 .. 3713442 +   -10  -5.44119   GGCTGAAAACCCACA            GGGGCG-CA GGA TGTCGCCCC            TTTTTTTGCAATGAA 100 53
        fumC 3714895 .. 3714916 + -11.6   -5.1675   ACATGAGATAAAAAA           GAAGCCGG GCTGCG CCGGCTTC            TTTTTTCATCAATGA 100 57
    AHA_3296 3715854 .. 3715886 + -11.4  -2.73007   GCAGTGCGAGAACCG     GGCGCAGGCATTGAT CTGC AACAAT-CCTGCGCC      ATTTGAAAACCTGTT  69 40
    AHA_3297 NONE
    AHA_3314 3734197 .. 3734217 + -14.1  -3.54146   GCCCCGCAAGTAACA            GGAAAGAGC ATC GCTCTTTCC            TTCATTTCCCCTCTT  95 28
    AHA_3315 3734900 .. 3734921 + -15.9  -3.32963   CCCGCTAAATACAAA           CAGGGGAGC CGGG GCTCCCCTG            TTCTGGCATCAAGCT 100 33
    AHA_3319 NONE
    AHA_3320 NONE
         dxs 3740510 .. 3740528 + -13.8  -5.42975   GCACACACAGTAAAA             GGGCGCCG TTA TGGCGCCC             TTTTTGTTTGTCTCG 100 48
    AHA_3330 3750260 .. 3750285 + -16.3  -2.65877   GCTGAGGCAAAACAA         CAAGGGATGAC CGAG GTCATCCCTTG          CTTCATATTCATTTC  89 36
    AHA_3337 3757053 .. 3757069 +  -9.3  -4.60255   CACATGCCCTGAAAA              GGCCGCC TCT GGCGGCG              TTTTTCCCGACTTGT  89 51
    AHA_3338 NONE
    AHA_3339 NONE
    AHA_3340 NONE
    AHA_3341 3760139 .. 3760157 + -13.1   -3.1352   GTAACACCGTAAAAA             GGGGGCG AATGA CGCCCCC             TCTCTTCCCTTCAGA  81 37
    AHA_3342 3762797 .. 3762813 +  -2.2  -5.47159   TCTTCCAGCAACGAG              TCCTGC GGATA GGAGGA              TTTTTTCTCTTCGAG  90 139
        acsA 3765163 .. 3765187 + -15.8  -2.88215   CTGCGTTCCTGCCTC          CAAAGCCGGC CTCGA GCCGGCTTTG          TCGTCTTTGCTACTG  87 47
        aroQ NONE
        accB NONE
        accC 3767770 .. 3767789 + -13.6  -5.59534   GCCTCTGTTGAAAAA            GGGCCATG GCGA CATGGCCC             TTTTTTGTTATCCTT 100 90
    AHA_3348 NONE
        panF 3769584 .. 3769594 +  -6.8  -3.65542   GGGTTCCGAAACTAT                 CCCA AAA TGGG                 TGTTTTACGGGTAAA  62 45
    AHA_3350 3771271 .. 3771295 +  -5.5  -3.13403   CCCCCCTCGTTGATC          GCCAGCTCCCG CAG CGCCAGCAGGC          TGTTGCTCAGACAAG  51 227
    AHA_3352 3773257 .. 3773267 +  -3.2  -2.64803   ACACATATCCTTATG                 CAGG ACC TCTG                 TACCTTTGCAGCTAG  40 221
        prmA 3774475 .. 3774505 + -17.7  -4.13767   CACTTGCCAAACTAT      CA-ACGGGGCTCCC ACAC GGGAGCCCCGTCTG       TTTTCAACTCGCCGG 100 45
    AHA_3354 NONE
    AHA_3355 3776675 .. 3776690 +  -3.3   -2.6162   GTAATAAACCAGGAT              TGAGA ACGGCA TCTCA               CTATTTAAAAAATTC  40 435
        sppA 3781662 .. 3781675 +  -9.5  -5.83822   CAAACGCAAAAAAAA               CCGCC TTGG GGCGG                TTTTTTTTACATCTG 100 48
       gap-1 3784678 .. 3784694 +  -7.9  -2.79831   GATGGCTGGCGCAGT              CCGCCAG GAT CTGCCGG              TCTGATCCCGATTCG  55 4
    AHA_3362 3785071 .. 3785097 + -16.6  -3.04157   CCGCGGCCACAGCAG         AGAGGGGAGCCA ATA TGGCTCCCCTCC         TATCTATCATGCTTC 100 63
        gltS 3792025 .. 3792050 + -14.7  -3.96148   ACGCATAAACAAAAA         GCCCCGCACTC GGCA GAGTACGGGGC          TTTGTCATGGCGGCC 100 150
        prfB NONE
        lysS 3796923 .. 3796942 + -16.4  -5.24129   CCATGGCAATCAAAA            CGCCCCGC AATT GCGGGGCG             TTTTTTATGGCAGGC 100 78
    AHA_3371 NONE
        cysI NONE
        cysH 3802336 .. 3802355 + -16.4  -5.27335   GGCGCCCATAAAAAA            CGCCCGGC AACA GCCGGGCG             TTTTTCTTTGCGCAA 100 61
        mogA 3809526 .. 3809546 + -15.4  -4.14764   GAAGAAATAAAAGCT            GGGCGGGG ATTTG CCCCGCCC            TTTGCTTATTTGCGA 100 31
    AHA_3399 NONE
    AHA_3400 NONE
    AHA_3401 3827251 .. 3827268 + -12.7  -4.32034   CTGAGCAAATGAAAA             CAGGGGC CGCG GCCCCTG              TTTTCATGGTGCTCA 100 29
    AHA_3404 3830478 .. 3830495 + -12.7  -5.63103   AGCCAACATGAAAAA             GAGGGCC CGTG GGCCCTC              TTTTTTTCATTCACC 100 59
    AHA_3415 NONE
    AHA_3416 3844782 .. 3844799 +    -4  -3.90112   CTGAACAGGTAACCA             GCCCCC GACGCA GGGCGC              TTTAGTTGCCAGGGG  56 166
    AHA_3418 3846185 .. 3846202 + -12.7  -5.33026   AGACTCACTGCAAAA             GGCCAGC ATTC GCTGGCC              TTTTTATTTGGGTTC 100 51
        pepD 3854342 .. 3854362 + -12.6  -5.48825   ACCGGCCACACCACA            TACCCCGC CAGGT GCGGGGTA            TTTTTTTGCCTGCTC 100 59
    AHA_3427 3854925 .. 3854942 + -12.7  -5.49234   CTCCAACCATGAAGA             TGGGGCC CGCA GGCCCCA              TTTTTTATTCGCTGT 100 181
    AHA_3433 3864348 .. 3864367 + -16.4  -3.53811   GAGATATAAACCCAA            GCCGGCCC GGTC GGGCCGGC             TTTGCCCAACGTCCA 100 53
    AHA_3434 NONE
    AHA_3435 3866570 .. 3866581 +  -2.2  -3.56727   CCGCAGCGTAAGGAG                TCAC CCAT GTGG                 TTCTGGTTGATTGAA  47 30
    AHA_3436 3867122 .. 3867133 +  -7.2  -2.78384   AGGATGCACTCCCCC                GCCG GGCC CGGC                 TCTGGTGGGGGCACA  55 44
    AHA_3437 3867669 .. 3867687 +  -2.3  -3.14132   AATGAACAAGCTCAT            CACACCGG ATCA CCGG-GAG             TTGGTGGAGAAGGAG  42 116
    AHA_3438 NONE
    AHA_3439 3869612 .. 3869631 + -11.4  -5.49569   GCCTTGGTGGCAATT            GGCCGCTC CCCG GAGCGGTC             TTTTTTATGTTCCTA 100 160
    AHA_3441 3875604 .. 3875621 + -12.7  -4.82901   GCCATCAAACCAAAA             GCCCGCA GCGA TGCGGGC              TTTTTATCGGCCGGC 100 50
    AHA_3448 3880299 .. 3880324 + -14.7  -2.75844   TAATTTTCCACCTCA         GGACTCTCCCC CTCG GGGGCGAGTCC          GTTTACCATAGGCAC  83 41
    AHA_3449 3881056 .. 3881076 +   -14  -5.44119   CAAGGAATGAAACAA            CGGGAGGC CTGGT GCCTCCCG            TTTTTTTGACCTGAA 100 31
    AHA_3450 3881551 .. 3881574 + -11.8  -5.40072   ACGCCAGTGAGCCTG          TAGGAGGAGCC ATC GGC-CCTCCTA          TTTTTTTGCCCACCA 100 44
        rsgA NONE
         psd NONE
    AHA_3462 NONE
    AHA_3463 NONE
    AHA_3464 3886304 .. 3886324 + -19.7  -5.28176   GGCAACCTTCTGCAA            GCCCCCGGC CCC GCCGGGGGC            TTTTTTATGCATGCC 100 44
    AHA_3467 3888388 .. 3888407 + -13.6  -4.72986   GCCCACAAACAAAAA            CCCCGTTG CAGG CAACGGGG             TTTTTGCTGGCACTC 100 43
    AHA_3469 3891079 .. 3891108 + -20.9  -4.57073   GCTGTAAGCCAGCAA       CAACAAGGCCACC CGAG GGTGGCCTTGTTG        TTTTTGCAACGCGTG 100 34
    AHA_3471 3894204 .. 3894220 + -15.1  -5.24989   CGACAGTTGTGAGCA              GGGGGCC TCA GGCCCCC              TTTTTTCATCTGTCG 100 44
    AHA_3472 NONE
    AHA_3473 3894536 .. 3894554 +   -16  -5.38497   AGCCAAATTTGAAAA             GCCCGCTC ATC GAGCGGGC             TTTTTTCATTTCGGT 100 36
    AHA_3475 NONE
    AHA_3476 3899880 .. 3899905 + -19.1  -3.33696   GAGGGCTGAAAATGA         CAAGGGCTGCC CACG GGCAGCCCTTG          TTGCTTGAGGAGGGC 100 39
    AHA_3483 3906437 .. 3906457 + -12.6  -5.35222   CGACCGATAAAATTC            GGGCAGGT GCCAA ACCTGCCC            TTTTTTATCGATTTT 100 79
    AHA_3484 3907769 .. 3907788 + -13.6  -5.60993   TCGGGGCGAAAAAAA            CCAGCGAC CTCG GTCGCTGG             TTTTTTTATGCGCGC 100 47
    AHA_3486 3910575 .. 3910611 + -29.7  -3.41878   CATCAGCCAACCGGA    TGACAATCAGCCCGGCC AAT GGCCGGGCTGATTGTCA    TTGTGCCTTGCGGCA 100 48
    AHA_3489 3914462 .. 3914481 +  -7.8  -4.28111   TCCAACCCCAATAAA            AATCCCGC CAAG GCGGGATG             TTTATTGCTCCTGTC  77 74
    AHA_3494 3935267 .. 3935284 +  -4.9  -2.79492   GAGGAACTGGCTGGC             GAATGAG CGGT CTTATTC              ATTTGCCGTTGCCCA  45 39
        ispZ NONE
    AHA_3496 3936259 .. 3936289 + -22.7   -4.9725   AGAGAAATAAAAAAA       GGCCGGACTGGCA GTTCA TGCCAGTCCGGCC       TTTTTCTATCCCGAT 100 53
    AHA_3498 3937595 .. 3937617 + -13.4  -5.09204   TACCCCTCCCCTCAT           AAGGGCAGCC TGT GGCTGCCCTA           TTTTTCTTCGGGTAT 100 49
        galU 3938616 .. 3938633 + -11.3   -5.1417   ATGGAATAAAACACT             GGGCATC ATTC GATGCCC              TTTTTCATTTTATAA 100 63
    AHA_3500 3940211 .. 3940240 + -22.3  -2.89191   CGGATTGTCTAGCAA       CAAAGAGGGCGCC CATG GGCGCCCTCTTTG        TATGTGGCCGTCTGA 100 47
    AHA_3503 NONE
    AHA_3504 3943180 .. 3943213 +  -8.9  -3.28785   TACAACGGCTGATCC     CCGTGCGAGTCAGG CTCCGCC CCTGACTCGC-CGC     TTCCCTCTTTTCCAG  65 29
    AHA_3505 3943979 .. 3944000 + -15.9  -4.81249   CAGCGCATACAAAAA           CGGTCAGCC CAAG GGCTGACCG            TTTTTCGCTTTACCG 100 64
    AHA_3510 NONE
         fis 3950580 .. 3950605 + -17.7   -4.9792   TGCAGTGCAGACGAA         GGCGTATCCCA GTGA TGGGATACGCC          TTTTTCTATGCCCTC 100 56
        hemL 3961382 .. 3961398 + -10.8  -5.45652   CCGCTTGTCGCAAAA              GGGCCC TTCAC GGGCCC              TTTTTTATTGCAGCT 100 45
    AHA_3521 3962828 .. 3962841 +  -3.7  -3.30124   TGAAGTTGCCGAGCA               GCGCG ATCC CGAGC                TTGTAACCGGTCAGC  48 466
    AHA_3524 3965066 .. 3965094 + -21.9  -3.61654   GCAGGCAGCCGGAAA        CAACAAAGGGGCC AGT GGCCCCTTTGTTG        TTTCCGGTCGGTGTC 100 59
    AHA_3527 3968287 .. 3968300 +  -2.3  -2.53894   TGGCGCTGCCAAGGA               GGCTG TATG CACCC                GTTGATCATCGTACT  38 7
    AHA_3528 3968640 .. 3968677 + -24.3  -3.86346   CGCACTGCTCGCCAT   GACAAGAAGCCGCCCGG CTAA CCGGGCGGCTTCTTTTC    TTTATGGGGCAATGC 100 52
    AHA_3532 NONE
        sfsA 3975734 .. 3975748 +  -7.1  -2.52464   CTCAATTTATGGATG               GCACG GGTAG CGTGC               TGAATTAGGAGACAG  51 112
        dksA 3976244 .. 3976261 +  -9.1   -5.4756   GCATAACAGAAAAAA             GGGAGCT CGCG GGCTCCC              TTTTTTATTGAGCTT 100 53
    AHA_3535 3977274 .. 3977292 +    -3  -4.08945   TTGATTGAACGTAAA             TCGCCGCT GTT GGCCGTGA             TTTTACCGGGATGAT  58 61
    AHA_3536 3979064 .. 3979092 +  -2.4  -3.34522   CGGCCGAGTGACAAC       TGACG-TGATGAC CGAG GTCTTCATCGCCA        TTGGTTCCAACCTGT  45 30
      folK-1 NONE
        panB 3980382 .. 3980416 + -12.1  -2.83164   ACTGATCCGATAGCG    TGACGAGAGCGGGGGC CTGC GCCCCCGCT-TCGCCC     TCTGGTGCTGACTGA  72 36
        panC 3981433 .. 3981462 + -20.9  -3.88787   CCGCAGCGCCACTGA       CAACAAAGCCCGC ATGT GCGGGCTTTGTTG        TTTCTGAGCGTGTCC 100 42
    AHA_3547 3988094 .. 3988123 + -19.3  -4.99645   CTCCGTCAAAATAAA       GCGGCGCCGAACT GTTC AGGTCGGCGCCGC        TTTTGTTTGTCCACT 100 45
         ppa 3990845 .. 3990882 + -17.9  -3.61715   CAAGTAAGCGTATCT   CTCGTGAAAAAGGCGCC TCAA GGCGCCTTTTTTATGGG    TTGTTGCGGGCGCTG 100 34
    AHA_3552 3991304 .. 3991318 +  -2.1  -4.30719   TCATCCAAAATCGGC               CAGCT CACCT AGTTG               TTTATTATCACCCCG  60 86
    AHA_3553 3992281 .. 3992297 +    -3  -3.50877   CCAGACTCCTCAAAC              CAGTTG ATAAG CAATTG              ATTTTTATCGACTGC  49 79
    AHA_3554 3993039 .. 3993057 + -13.8  -3.74251   CTAAGTCAGAGAGAA             GGGGCGCT GAT GGCGCCCC             TTTGATAGGGGTCTA  89 37
    AHA_3555 NONE
    AHA_3556 3993965 .. 3993981 +  -2.2  -2.73364   AAACTGAGCTGGTAA              CGCCAT GAAAA ATGCCG              TGGTTGAGATCCGCG  39 26
    AHA_3557 NONE
    AHA_3558 NONE
    AHA_3559 3996420 .. 3996439 +   -15  -4.77165   GTAACCAGGCACACA            CGGCCTCC CTCG GGAGGCCG             TTTTGTTATCCGCGA 100 37
    AHA_3560 3997420 .. 3997441 + -13.7  -2.90496   TGCCCCCTGATCCCC           TGGAGCCCG CCCC CGGGCTCCG            TCGTTTCGCACACCG  81 31
    AHA_3561 3999335 .. 3999365 +  -5.3   -4.1523   CGCTAACAACAAAAA      AAGGCCC-CTGTCG TCAC CGGCAGCGGGCCCA       TTTATCTCTGGTGGG  65 54
    AHA_3562 4001266 .. 4001281 +  -3.9  -3.59979   GGTAGGATGGAGCTG              GCGGG TCAATC TCCGC               TTTAGACTAACGACA  51 41
    AHA_3563 4003157 .. 4003181 + -14.3  -2.71416   AGAACGCAATAAATA          GGAGGGGGG AAATGCC CCCCCCTCC          CTTATATCACTGCTC  83 49
    AHA_3569 4010667 .. 4010688 +  -2.2  -3.02144   GTTCAAGGATGGCAA           GGGC-GGCA AGTCA TGACAGCCC           TGTTCGAGGGGCTGA  42 10
    AHA_3570 4011169 .. 4011184 + -10.4  -4.28375   ACCGCCAACGACAAA              GGGCTC CTCG GAGCCC               TTTTCGCTGTCTTGC  90 60
    AHA_3572 NONE
    AHA_3573 NONE
    AHA_3574 4015021 .. 4015040 +   -15  -5.15167   CTCGCACACCGCCAA            GGGCCTGC CACT GCAGGCCC             TTTTTATTGGTCATG 100 53
    AHA_3576 4016744 .. 4016758 + -12.8  -4.65895   ACGCCAAATAAAAAA               GCCCCG TCA CGGGGC               TTTTTCCATGCCAGC 100 87
    AHA_3578 4017519 .. 4017571 + -12.6  -3.48276   GCGCGCCCGTCAGCA GCTGGCACTGGCCTGAGGGAGGGGC TGCG GCCCTTCCC-CACGCTTGGACCAGC TTCTCTCCCCCCGGC  85 10
    AHA_3579 NONE
    AHA_3580 4020235 .. 4020249 +  -8.5  -2.91383   TATAACTACCAGATA               CCGGC CTAAA GCCGG               TGTCTGAATCAAACT  59 57
    AHA_3581 4021349 .. 4021368 + -13.6  -5.14563   ACCGGCATAAGAAAA            CCGGAACC CAAG GGTTCCGG             TTTTTTCATCAAGGC 100 31
    AHA_3592 NONE
    AHA_3593 4036600 .. 4036610 +  -2.4  -3.23393   ATGGTCAGTTGAAAG                 GGGC GAA GCCA                 TCTTGTAGCGTGCCA  43 66
    AHA_3594 NONE
    AHA_3596 4039451 .. 4039464 +  -3.8  -3.64703   CCCCAGGCTGGCGTC               GAGC GTGGTA GCTC                TTTGACTCCGGCAAC  53 62
    AHA_3597 NONE
    AHA_3599 4043725 .. 4043775 +  -5.4  -3.53012   CCAGCAACCCATCAC CAGGGTACGCCAGTGCAGC-GCCAGC CCG GCGGGCAGC-GC-CTGACG-ACCCAG TTTCCAACCCAGCAG  53 95
    AHA_3602 4046807 .. 4046823 + -11.5   -5.4433   CTGACAAACAAAAAA              GGGGCCG ACA TGGCCCC              TTTTTGTTTCTGTGT 100 37
    AHA_3605 4050021 .. 4050048 + -12.1  -3.17075   GAACGCCAGAAACAA        CAAAGCAGGCG CCGGGA TGCCTGCTTTG         TTGCCTTCGGGGAGG  78 46
    AHA_3606 4050815 .. 4050855 + -28.7  -2.78463   CGGCGGGCCAGACCG  GATAAAAGAAGAGGAGGCC ACT GGCCTCCTCTTCTTTTATC  TGTAGTCAGCAGCCT 100 55
    AHA_3610 NONE
    AHA_3611 4053742 .. 4053769 +   -12  -5.35459   AGACTGCTTGCATGA        CGGGCCCATC CGCCCTAA GGTGGGCCCG         TTTTTTATGGTCTGT 100 67
    AHA_3612 4054264 .. 4054275 +  -3.6  -2.58999   AAGCCATCGCCTACA                GGCT GGCC GGCC                 GTTGCTATATGCCGA  42 39
    AHA_3613 4055656 .. 4055681 + -21.9  -4.67353   GCGGCCACAAAGAAA         CGGCCCCCTGC CAAG GCAGGGGGCCG          TTTTTGCATGGATGC 100 53
       gap-2 4064116 .. 4064144 + -16.1  -3.21276   GCAATCAAGTAGCTT        GAAAAAGGCGGCC ATT GGCCGCCTTTTTG        TATTCTGGACCGGGA 100 51
    AHA_3619 4065097 .. 4065118 + -15.9  -3.79565   GAACAGATAAATAAA           GAGGGCTCC CGCG GGAGCCCTC            TTTGCATCTCTTTGT 100 50
    AHA_3621 4068484 .. 4068501 + -12.7   -4.7173   CGGCCATAAAAAAAA             GCCCGCA TTGC TGCGGGC              TTTTTCAATCTGGTG 100 48
    AHA_3649 4083768 .. 4083786 + -17.4  -3.90318   TCGGGTCTGACCAAC             GCGGGGGC TAT GCCCCCGC             TTTCTCCCGTCGTAC 100 31
        proS 4085643 .. 4085672 + -15.1  -4.36914   CCCCCTAGCCCCCAT       AAAAAAGCGCGCC ATTT GGCGCGCTTTTTG        TTTTCTGCCGCAGGG 100 46
    AHA_3654 4088831 .. 4088843 +  -6.9  -4.11216   GGTGCCGAGCGCGCC                CGCGC CCA GTGCG                TTTTCAGCCTCCAGC  69 401
    AHA_3656 4089846 .. 4089871 + -11.7  -4.25256   GCAACCATCATGACG         AAGCGGGGGGC ATTG GCCCCCCGCAG          TTGTTTTGATAGCGG  93 28
    AHA_3658 NONE
    AHA_3659 4092809 .. 4092830 + -15.9  -4.84359   GCCGTCATGAAAAAA           GCCCCGAAC CTGC GTTCGGGGC            TTTTTCTGGGCATGA 100 31
    AHA_3665 NONE
    AHA_3666 NONE
    AHA_3667 4098865 .. 4098884 + -13.6  -5.86976   AAGCACTTTTTATTG            GCCGACGT TTAT ACGTCGGC             TTTTTTCTTTTCTGG 100 102
    AHA_3669 4101053 .. 4101066 +  -3.8  -3.28712   GAACTATTTTTTCAC               GCCA TTATGC TGGC                TTCTAAACGAGCGCC  47 51
      brnQ-2 4102549 .. 4102569 + -12.6  -5.05113   CCCGTCCATCTCAAA            GAGCCTGC CTTGC GCAGGCTC            TTTTGTTTGTCTGCC 100 48
      brnQ-3 4104220 .. 4104241 + -15.9  -3.20432   GGCGACCAACGACAA           GAGGCCAGC ATTA GCTGGCCTC            TTGCATTGCATCTGT 100 48
        dusA NONE
    AHA_3676 4106704 .. 4106751 + -25.4  -3.04461   AGTTCACCCCGCGTC GACCAATAAAAAACCGGCAACAC CCA GTGTTGCCGGTTTTTTATTG-TC TCTTCAGCCTCGCTA 100 40
        algQ NONE
    AHA_3680 4108885 .. 4108914 + -18.1  -3.07816   GCGATATACCCGATG       TAAAAAGGAGCGC CATT GCGCTCCTTTTTA        TTGCCTGCCTGCGGC 100 41
    AHA_3682 NONE
    AHA_3683 4112728 .. 4112754 + -23.8  -4.57482   GGGCAGGCAATAAAA         CCATGGCGGGCC TCT GGCCCGCCATGG         TTTGTTTATCCATCA 100 75
    AHA_3686 4117825 .. 4117844 + -16.4   -3.6216   CCTTGCAATGCAAAA            CGGCGGCC CGAG GGCCGCCG             TTGTCATTATTCATG 100 49
    AHA_3693 4125974 .. 4125991 + -11.3  -4.82901   ACAGGTATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 277
    AHA_3697 4130435 .. 4130453 +   -16   -4.7254   GGCAGCAACGGAAAA             GGGCACCC CGA GGGTGCCC             TTTTTGCTGGCCGAT 100 47
        pepA 4134628 .. 4134653 + -16.3  -3.91798   CGTTACCCTGAATCA         CAAGGAAGAGG CCCG CCTCTTCCTTG          TTTCATTGAGGGTTG 100 80
    AHA_3701 NONE
        valS 4138099 .. 4138114 +  -5.4  -2.86676   AGCAGGCCGAGATCG              CCGCGCT GTA AGC-CGG              ATTTGACTTGGTAGA  49 15
    AHA_3703 NONE
    AHA_3704 4140285 .. 4140304 + -13.6  -5.47821   TGAGACAAATACACA            GGGCCATC GCAA GATGGCCC             TTTTTTTAGCTAAAT 100 38
    AHA_3705 4141263 .. 4141278 +    -9   -5.4505   CACGGGGATGAAAAA              GGATGC TGCG GCATCC               TTTTTTATTGCCCGC 100 49
        mutS 4152113 .. 4152160 + -16.4  -3.14564   ACCAGCGGCAGCTGA TCAGCCATGAAAAAGGGGAACC GCGA GGTTCCCCTTTTGTTTGGCTGC TTGATGGCGGCCTCA 100 40
    AHA_3721 4154976 .. 4154991 + -10.4  -5.60993   GCGGGCATAAAAAAA              GCTCCC AATC GGGAGC               TTTTTTTATGGGCCG 100 31
    AHA_3723 4156728 .. 4156750 + -20.6  -5.27335   ATCAGCCAATAAAAA           GGCCCCGCCA GAG TGGCGGGGCC           TTTTTGTTTCGGCGA 100 46
    AHA_3725 NONE
    AHA_3727 4160774 .. 4160790 +  -7.2  -3.27771   GTCGGTTCGCTTGCT              GCCGGG CAGGA TCCGGC              TGTTGATGTTGTCGA  58 194
        znuC NONE
        znuB 4164031 .. 4164042 +  -7.2  -3.44146   TGAGCCGATTCACAC                CCGC CTGA GCGG                 TTCATTCTCGCCGGG  61 122
    AHA_3732 4165899 .. 4165924 + -14.7  -4.16842   CGCTCTAGCCAACGA         GGGTCACCCCA GCAG TGGGGCGACCC          TTTGTTGCAGATGGG 100 33
      rarD-2 4167532 .. 4167542 +  -4.6  -3.05816   CCCGGTCCATCTGCT                 CGGC GAT GTCG                 TTCAGTCGGGAGTAC  47 69
    AHA_3736 4168647 .. 4168664 +  -5.5  -3.28924   CAGGGAGTGTCAACG             GCAGGTT GATT AACCAGC              TTGTGCCGGCGGCTG  52 13
    AHA_3741 NONE
    AHA_3742 NONE
    AHA_3743 NONE
    AHA_3744 NONE
    AHA_3745 4174942 .. 4174960 + -13.1   -5.0133   GACCCCTGACCTCGA             CGCCCGG CCAGT CCGGGCG             TTTTTTCAACCCCTG 100 39
    AHA_3746 NONE
    AHA_3747 NONE
    AHA_3748 NONE
    AHA_3749 4177796 .. 4177819 + -18.2  -2.62616   TTGCCTCTCCTCCCA          CAACGCCCGG CTTG CCGGGCGTTG           TGCTATCCGGCATCC  95 69
    AHA_3750 NONE
    AHA_3751 4178700 .. 4178712 +  -3.3  -3.91737   ACAATTCGCCTTGTT                GATGG CGC CCAAC                TGTTATTTTTCTTCA  54 52
    AHA_3753 4181416 .. 4181431 +  -4.6  -4.86731   TGCAGCCAACGTGGT              GGCCAG GTCT CTGGCA               TTTTCTTTCCAAGAA  80 335
    AHA_3766 4195183 .. 4195200 + -12.7  -5.18726   ATCGGCAATGAAAAA             GGCGACC TTAT GGTCGCC              TTTTTGTTATCCGGG 100 49
        htrB 4197940 .. 4197953 +  -9.5  -5.26918   AAAAAACCGAAAAAG               CCGCC GAAA GGCGG                TTTTTTCTAGCCTGT 100 46
    AHA_3769 4198598 .. 4198614 + -12.3  -4.74103   ACAGCTAAAGAAAAA              GGTGAGC CAG GCTCACC              TTTTTGCATTGCAGG 100 84
    AHA_3771 NONE
    AHA_3772 4201767 .. 4201787 + -18.3  -5.71712   GCGCTGCAGTGAAAA            GCCCGGGTC ATT GACCCGGGC            TTTTTTTATCTCGGC 100 44
    AHA_3773 4202361 .. 4202395 +  -9.2  -3.53563   ATCGGGGAATAAAGG    CGTGAGCGGGCCTGC TACTGT GCAGGCCAGC-CTCG     TTTACGGGAGCATGT  68 29
    AHA_3778 4207091 .. 4207115 +  -4.2  -3.58343   CCCGCTGAAGGCAGC         CCGCCCGCTCA GCCT TGGG-GGCCGG          TTTGCCCCTGCTCGC  52 33
    AHA_3780 4208498 .. 4208511 +  -3.7  -2.71447   GAGTTGAAACTGGCC               CGCCG GAGT CGTCG                TCATGTCTGATACCT  43 2
    AHA_3781 4209212 .. 4209225 +  -2.3  -2.71712   CTGGTAACCTGCGCG               TCGGT AAAA GCCGG                GTTTCCCGGGCCCAG  39 34
    AHA_3782 NONE
    AHA_3783 4211205 .. 4211225 + -18.3  -5.30686   CGCAGCAATGAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTGTCCATGTT 100 61
        exeA 4214397 .. 4214409 +  -5.5  -2.62616   CATCAACACACTGTC                GGAGG AGG CTTCC                TGATGTCCACCCTGC  46 10
    AHA_3786 4215136 .. 4215155 +  -4.9   -4.7497   GGCCACCATTTCAAG            AGGGAGC CTGAGA GCTCCCC             TTTTTAATCAATAAC  74 66
        mutY NONE
    AHA_3788 NONE
    AHA_3789 4217846 .. 4217866 + -18.3  -3.70773   CAGACCAAGACAAAA            GGGCGCCTC ATG GAGGCGCCC            TTGTTACGTCTGGCG 100 42
    AHA_3791 4219538 .. 4219557 +   -15  -5.58179   CCCACTGATGAAAAA            GGGCCGAC GACA GTCGGCCC             TTTTTTGTTGTGCTG 100 33
    AHA_3793 4221653 .. 4221672 +   -15  -3.38281   CCACGAATGAAAAAA            CGGGAGGC CAAG GCCTCCCG             TTCCATTTTGGGTCG  95 61
    AHA_3797 4225792 .. 4225802 +  -5.4  -2.90763   GACCGAGTCCATTCT                 CATG TAT CATG                 TCTGTCCCGTATGAG  49 86
    AHA_3802 4231628 .. 4231643 + -10.4  -5.47218   TGTTACACCTCAAAC              CACCCC TTTA GGGGTG               TTTTTTTGCATCAAG 100 102
        glgC NONE
        glgA 4234409 .. 4234447 +  -6.1  -2.72049   TTGATGCTGCTTTGA   ACGTCAACAGCGAAA AAAGTCCCC TTTGGCTGTTGACGC   TCCTTCAAAACTCTA  50 66
    AHA_3805 NONE
    AHA_3806 NONE
    AHA_3807 NONE
    AHA_3808 4235000 .. 4235014 +  -4.2  -3.53224   GTAAAACGCAGAAAA               TGCGCT CCA ACCGCA               TTTAAAAACCAGCTG  52 53
    AHA_3809 4235139 .. 4235172 + -22.7  -4.64144   GCACCATTCATTATG     CAAAAGGCCCATCAC GAAA GTGATGGGCCTTTTG      TTTTTACCCCTTGTT 100 35
    AHA_3811 4235737 .. 4235748 +    -3  -3.18509   CTCCCCTTCAACAGT                TGAT AACA ATCA                 TCATTTGTATTTTAG  45 251
        nhaC 4237447 .. 4237463 + -10.8  -4.52589   AAAAACCATGACAAA              GGCGCC AGCAC GGCGCC              TTTTGTCTGGCCGCG  93 48
    AHA_3813 4238590 .. 4238604 +  -5.8  -3.31263   TACGCTCATGGCTGG               TTAACA GGA TGTTAA               TTGTCAGCGTGGCAT  56 162
    AHA_3814 NONE
    AHA_3815 NONE
    AHA_3816 NONE
    AHA_3817 NONE
    AHA_3818 4244251 .. 4244275 + -21.5  -2.88249   CGAAGACGAAAAGCA          GAAGGCCCCGC ATG GCGGGGCCTTC          TCTCTGAGCACTCTG 100 53
    AHA_3821 4246644 .. 4246679 +  -7.5  -3.14211   CGCAACACCTTGCAG    GGGT-TGCCGGCCGCC ACCAC GCCCGCCGGCACATCC    TTGGTCACCACAGAT  56 193
    AHA_3826 4252679 .. 4252694 +  -6.8  -2.76492   GCCAGCAGCTTGACC              TTGCCG CGGG CGGCAG               CTTTACGCTGACTAC  52 40
    AHA_3827 4253014 .. 4253028 +  -2.1  -2.70044   CCCCGGCAACAGAAA              GC-GCA AACT TGCTGC               AATTTTTCTCACCTC  38 113
    AHA_3828 4254162 .. 4254182 +   -14   -4.1899   TGATGACAACAAAAA            GGGCGGGA CAAGA TCCCGCCC            TTTTGCATGCGATGC 100 70
    AHA_3830 4256195 .. 4256216 + -17.3  -3.05997   TCCCGCCAATAAAAA           GAGCCGGCC CCTT GGCCGGCTC            TGTCGTTTCTGCCCC 100 48
    AHA_3835 NONE
    AHA_3837 4262760 .. 4262808 +  -8.7  -3.29471   GGTACAAGGGCTCGA C-CCCAGCAGCGGCAGCAGCTGG CTGAT CCAGC-GCAGCGGCAGCAGGGCG TTGGTCTGGTAGAGC  60 357
    AHA_3838 4264372 .. 4264406 + -19.5  -3.18264   CCGCCGGTCGGCCAC    GCAAGCAAAAGGGCGC CGAG GCGCCCTTTTGCT-GC     TTGATGGCTCACCCC 100 43
        folB 4270181 .. 4270193 +  -3.4  -2.88544   CCGCGAGCGCCAACT                GATG ACCCG CATC                TATATCAGCCTGGGA  42 24
      folK-2 4270693 .. 4270722 + -20.9  -3.14211   TGCAGCACCACTGAA       CAACAAGGGCACC TCGC GGTGCCCTTGTTG        TTGATGGACGGAGCT 100 27
    AHA_3849 4271290 .. 4271310 + -11.1  -2.57132   AGCTACCTGCCGGCC            CCCTGAGCC CGC GGCTCAGCG            CTTGTCCCGCGCCAG  68 20
    AHA_3854 4277512 .. 4277528 +  -2.2   -3.0497   CAGCGCCATGTCGCG              GCAGTG GGCGG CACTGA              TGTTGAAGCTGATGT  41 525
    AHA_3858 4286003 .. 4286020 + -14.1  -5.16071   CTTCTGACATCATAA             GGGGCGC TATG GCGCCCC              TTTTTGTTGGTCGTT 100 43
    AHA_3859 4287796 .. 4287811 + -11.8  -2.87132   ACACAACTTGCCAGA              GGGCGC TGCG GCGCCC               TCTGTCGCCACCACG  75 56
    AHA_3860 4288120 .. 4288137 + -12.7  -5.00616   GCTGAAAAACAAAAA             GCCGCTC GATT GAGCGGC              TTTTTTACAGGCAGA 100 54
    AHA_3866 NONE
        nadC 4297644 .. 4297658 + -12.8  -4.86731   GAAGGACTTGCAAAA               GGCGCC ACG GGCGCC               TTTTCTTTAAGGCAG 100 91
    AHA_3868 4298365 .. 4298375 +  -5.4  -2.79183   TACCGGTACATGTGC                 TGCT GCT AGCA                 TGTGCTAACGATGAC  47 7
        pilB 4300115 .. 4300141 +  -3.7  -3.64703   TATCGCTCAGCCGAT        TCATCCAGGTGCC GCC GGC-CCTGGC-GA        TTTCCATCAGGCCGA  53 48
        pilC NONE
        gspO NONE
        coaE NONE
    AHA_3873 4303733 .. 4303744 +  -4.4  -3.21099   TTCCAGCTTGCCTGC                TGCT AAGG AGCA                 TTCATGGTGACCAAA  49 20
    AHA_3874 4303952 .. 4303978 + -13.8  -4.35116   CAGTAAGCCAGCAAT         CAAAAAGGGCCG ATA CGGCCCTTTTTA         TTTTGGTATGCACTG 100 35
    AHA_3895 NONE
    AHA_3896 NONE
      gmhA-2 NONE
    AHA_3898 4331487 .. 4331504 + -12.7  -5.68438   CTCGGCATAAAAAAA             CGCAGCC AGTT GGCTGCG              TTTTTTATTTGATGA 100 56
    AHA_3907 4338250 .. 4338260 +  -5.4  -3.49687   GTCAGACCTTGACGA                 TTGC ATT GCAA                 CTTTTTCTGGGAGCT  55 72
        degQ 4339654 .. 4339679 + -20.5  -4.83169   TCCGTTAACTGCCTC         TCACCCGCGGC CCTC GCCGCGGGTGA          TTTTTATCCACCGAT 100 33
        degS 4340877 .. 4340898 + -17.3  -3.90588   GCCAATCCCCTTCGA           CAGGGGCGG TAAA CCGCCCCTG            TTTGCTTCCCCCATA 100 45
    AHA_3910 NONE
    AHA_3911 NONE
    AHA_3912 NONE
    AHA_3913 NONE
    AHA_3914 NONE
    AHA_3915 NONE
    AHA_3916 NONE
    AHA_3917 4346698 .. 4346731 + -18.9  -2.82895   CTGGCCTGACGGCCC     TCAGGCACCGGTCCG ATCA CTGACCGGTGCCTGG      CTTGTTAATGACCCG 100 32
    AHA_3918 4348944 .. 4348956 +  -3.3  -4.74103   GGCCGGTCTGGCATG                CATGC CCA GCTTG                TTTTTCACTTCCACC  73 269
    AHA_3929 4356518 .. 4356533 +    -4   -2.9155   CATTTTCCGGCAGGC              GA-CCTG CTA CAGGATC              TCTGATGTTGACAAG  44 5
    AHA_3930 NONE
    AHA_3931 NONE
       ttg2D NONE
    AHA_3933 NONE
    AHA_3934 NONE
        murA 4360289 .. 4360311 + -20.6   -4.7497   ACGCCGATACAAAAA           GGCCCCTCGC ACT GCGAGGGGCC           TTTTTCATGGCTGCA 100 56
    AHA_3937 4362372 .. 4362390 + -13.8   -4.3586   ACAGTACAAATAAAA             CGGGGCCG ATA TGGCCCCG             TTTTCGTGTCACTGC 100 72
    AHA_3945 4373305 .. 4373320 +  -3.9  -3.57039   TGACATGCTCGGTCA              CCCCG GGTTCA TGGGG               TTCTGATTCTCGCTG  53 216
    AHA_3947 4375051 .. 4375062 +  -2.2  -3.94877   AATTGCCATTAAGTG                GTGT CGAG GCAC                 TTCTTCTTCCCCGAT  54 111
    AHA_3948 4376201 .. 4376221 + -14.1  -5.60993   CGCCATAACAAAAAA            GCCAATGAG CGA CTCATTGGC            TTTTTTTGTGCCCGC 100 46
    AHA_3950 4378285 .. 4378304 +   -15  -4.14627   TGACAGCAAAGAAAA            CGGGAGGC TGAT GCCTCCCG             TTGTTTATCTACCGG 100 51
         ssb 4389603 .. 4389622 + -11.4  -5.52909   ACGTCAGATCCCGGA            GGCCCTGT TCAT GCAGGGCC             TTTTTTTGCCTGTTA 100 44
    AHA_3958 4390530 .. 4390549 + -10.7  -5.14163   CCTGAAAACATAAAA            GCCAGCC CGAAAA GGCTGGC             TTTTTGTTACTGGCT 100 45
    AHA_3960 NONE
    AHA_3961 4392759 .. 4392774 +  -2.6     -3.81   CAGCGATTAGTATAA              GAATTA TCCA TGATTC               TTCTTATCAAATAAT  52 305
    AHA_3962 4393159 .. 4393172 +  -9.5  -5.60689   CAAGAATTGAAAAAA               CCCGC TTCG GCGGG                TTTTTTGTTGTCTGC 100 93
    AHA_3963 4395453 .. 4395477 + -20.7  -5.27335   AACTTCTGATGACCC          GCCGCCGCCCG ACT TGGGCGGCGGC          TTTTTATTTCCCCGC 100 32
    AHA_3967 4399979 .. 4400009 + -16.9  -5.28942   GCCCCAGCCTAAAAA       TACCCCGCCAGCG GGCGA CGCTGACGGGGTA       TTTTTATTTCCCGTC 100 45
    AHA_3968 4400548 .. 4400563 + -11.8  -5.14965   GACAAGCAGCAAAAA              GGGGCC CTCG GGCCCC               TTTTTTCATGCACGT 100 44
    AHA_3972 4403879 .. 4403889 +  -2.4  -2.52933   AAGCGTAATCGGACA                 GCGG TAA CGGC                 ATTGCTCCCTTCCCC  38 165
    AHA_3973 4405010 .. 4405043 + -12.7  -2.75064   CATTTCGCTGAAATA     TT-GATGGCGGTAAAT TTC GTTTACCGCCATCCAA     TAGTTCACTCCCCCA  76 44
    AHA_3980 4417268 .. 4417278 +  -3.2  -3.68619   ACCTTCCACTCAGAC                 TGGT CTG GCCA                 TTTCCATCGATTACG  51 344
    AHA_3981 4418170 .. 4418191 + -15.9  -2.64155   TCGACAACTGATCCC           GGCGGATCC TGCG GGATCCGCC            TCCCTTTCCACACCG  85 30
    AHA_3983 NONE
    AHA_3984 NONE
    AHA_3985 NONE
    AHA_3986 NONE
    AHA_3987 NONE
    AHA_3988 4424543 .. 4424564 + -14.5  -3.73224   GGCCTCCTGAATGAA           GAAGAGGCC CTCA GGCCTCTTC            TTTGCTCAGCAGTGC  95 31
    AHA_3990 4426822 .. 4426842 +  -4.7  -3.35597   GAGGCTGGCGCTTTG           CGGCACGG CCCTGC CCGT-CCG            TCTTTCAGGGATGAA  51 134
    AHA_3991 4427916 .. 4427936 + -18.3  -4.38712   TGACCCCAAACAAAA            CGAGGCGCC CAG GGCGCCTCG            TTTTATGGCCGTACG 100 181
    AHA_3994 4430937 .. 4430956 + -16.4  -3.44051   TCTGCAAAAGCAAAA            CGGGGGCC TGTT GGCCCCCG             TTCTCGTCATCACGG 100 58
    AHA_3996 4433162 .. 4433190 +   -14   -4.2558   CTCAAGTAAGCCCCT       C-ACCAGGCCATC GCAA GATGGCCTGGTTG        TTTTCCTCCCCCCTC 100 32
    AHA_3997 4434103 .. 4434124 + -15.9  -3.79251   AACCCAAGATGCAAA           CAGGCCACC CGAA GGTGGCCTG            TTTCATGGTGCGATC 100 40
    AHA_3999 4436079 .. 4436090 +  -5.8  -2.57026   ACCCAAGGGCCCAGG                CCCT GACA AGGG                 ATTGCTATGAATATG  49 4
    AHA_4000 4437243 .. 4437263 + -14.7  -5.09762   CATCGCTGGTACAAA            GAGCCGCCC ATC GGGTGGCTC            TTTTGTTTATTACCG 100 86
    AHA_4003 NONE
    AHA_4004 4443221 .. 4443242 + -12.9  -4.96848   CCGCTGACAACGAAA           AGGCCCCGC AGAT GCGGGGCCG            TTTTTATATGGCAAG 100 68
    AHA_4010 4449139 .. 4449158 + -13.6  -3.69395   CGGAAACGAAAAAAA            GCCCAGTC GTTA GACTGGGC             TTCTTAAGTAGTGGC  89 87
        coaA 4477485 .. 4477512 + -21.4  -3.14051   AACACGAATCAACAT        GAAGAGGGGGCC CGCA GGCCCCCTCTTC         TATTCATGACGATCG 100 49
    AHA_4042 NONE
    AHA_4043 4481675 .. 4481696 + -14.4  -2.72344   CACCGGCTGATGACA           CCGGGGCC CGCCGC GGCCCCGG            TCATTCGCGCTGCCG  83 31
    AHA_4045 NONE
    AHA_4046 4483622 .. 4483639 + -14.1  -5.93809   CGACAATGCCTTTTT             GCGCCCC GACA GGGGCGC              TTTTTTTTATCAGGC 100 41
    AHA_4048 NONE
    AHA_4049 4489640 .. 4489658 + -13.1  -4.84914   AGTGAGCAACAAAAA             CGGCGCC ATCAA GGCGCCG             TTTTCTTATCTCGGT 100 48
    AHA_4054 4493023 .. 4493039 +  -9.4  -5.45652   GGTGACATCAAAAAA              GAGGCC GACTA GGCCTC              TTTTTTATTGCGGGT 100 14
    AHA_4058 4495613 .. 4495656 + -18.2  -3.97636   GACCGAGCCGGTCTG AAACAAGAGGGGCGGTCCGTC ATC GACGGGCCGCCCCTCT-GTCA TTTATCCCTTCGACT 100 53
    AHA_4062 4499704 .. 4499759 + -14.6  -3.35679   GCGCTGACCCCTAGA TGACGGCCAGACCGCGGCCACCATCC ACCC GGATGCTGGCCCCGGTCATGTAGTCG TTCTGCATCAACAGC  95 34
    AHA_4065 NONE
    AHA_4066 4502708 .. 4502729 +  -4.4  -4.07568   CACCCGCGTTCCCTC           GATGATGC CCGCCT GCTTCATC            TTTTCCACCCGCACA  61 423
        asnA 4504197 .. 4504216 + -12.2  -5.40072   TCACTACATTCCTCC            CGGCAATC TTCG GATTGCCG             TTTTTTTACACCGAA 100 210
    AHA_4074 4510584 .. 4510602 +   -16  -5.60993   CAACGCAATGAAAAA             CCGGAGCC CCT GGCTCCGG             TTTTTTTATGGGCGC 100 48
    AHA_4082 4522216 .. 4522228 +  -7.7  -3.62522   ACCGGATGAGGCACG                GCTCA AGG TGAGC                TTCTTCGGCCCCTTC  65 333
    AHA_4086 4527345 .. 4527361 + -13.7  -5.93809   TTGTTTTTAAAAAAA              GCCCCTG TTT CAGGGGC              TTTTTTTTGTGCCCG 100 233
        pyrB NONE
        pyrI 4528839 .. 4528856 + -12.7  -4.59109   CAAAAGATATCCAGG             TGGGCCC CAAG GGGCCCA              TTTTTGACCCCTGTC 100 51
    AHA_4089 4529546 .. 4529563 + -12.7  -5.07486   CCATGAAGAGATCGA             GGCGACC AGAA GGTCGCC              TTTTTGTTGCCGCTG 100 49
    AHA_4094 4535506 .. 4535530 + -18.7  -2.64099   ACTGAGAGTGAGAGC          CCAAGAGGAGG CCA CCTCCTCTTGG          CTTGTCATGGCCCAA 100 36
    AHA_4095 NONE
    AHA_4096 4536610 .. 4536630 +  -8.3  -2.82623   GCTACAGGAACACAA            CTGACACGA CAG TCGTGTCAC            TGATTATCACCCCCA  57 22
      galE-2 4548370 .. 4548424 +  -4.1  -4.20918   CCCTTCTCCCGTCGC GGGAGAGGGGCCAAAGATGAGCGGCG CCCC CGCC-CTCATCACTGCCCGCAATTCC TTTATTGAGCTTGAG  60 54
        galT NONE
        galK NONE
        galM 4551733 .. 4551770 +  -6.1  -3.54129   CCTCCGGCAGACCTG   CGCTGAC-CACCCCAGGC GCG GCCGGGGCGGCGTCACCG   TTTCGCGGCACTCTG  57 50
    AHA_4107 4553024 .. 4553051 +  -9.8  -3.14211   TTTCCTCCATCATTG        GTC-GCCCCTGGC TCG GCTCGGGGCCGAC        TTCATCCGGACCAAT  67 145
    AHA_4108 4553925 .. 4553941 + -10.1   -5.4505   AACACCATGCAAAAA              GGGACCT CGA GGGTCCC              TTTTTTATTGCCGCC 100 50
        argS NONE
    AHA_4113 4558809 .. 4558836 + -22.8  -4.72007   CCGCGTCCATACCCA        CAGGGCCGGGTG GCAA CACCCGGCCCTG         TTTCTTTTGGTGCCA 100 44
        hslV NONE
        hslU 4560996 .. 4561018 + -14.9  -4.64861   TCAATCTCATCACAA           GACGCCTCC CCTGT GGAGGCGTC           TTTGTTTTCAGCCCC 100 88
    AHA_4117 4563665 .. 4563686 +  -2.3  -3.80625   ACCAATTGCGCCACT           GGTATACCT ATTT ATGTATATC            TTTGAATTATCAGGA  52 161
      nirB-2 NONE
        nirD 4566802 .. 4566821 + -12.8  -3.01712   ACACCATGCATATCA            GGGCTGCC CGCG GGCGGCCC             TCTTGAAGGAAACAA  81 40
    AHA_4120 4567659 .. 4567669 +  -2.4  -2.73735   CCGCCTGATCAGGAG                 GCCC CAT GGAC                 TACTTGCCCATCTTT  39 33
    AHA_4121 4569089 .. 4569106 + -12.7  -4.97405   CGATATCCATTCCAA             CGCCACC CTCG GGTGGCG              TTTCTTTTTCTGCAT 100 44
      mgtE-2 4570646 .. 4570664 + -11.7  -3.81146   GCTTGGCAATAGAAA             GGGAGCC TTTAT GGCTCCC             TTGTTCATTCGGCGC  86 44
      rraA-2 4573188 .. 4573205 + -11.3    -5.252   AGAGCAGAGTGAAAA             TGGGAGC CAAA GCTCCCA              TTTTTTATGCCCGTC 100 43
    AHA_4128 4576639 .. 4576662 +  -7.4  -3.47227   ATCTGCTTGCGCAGG          GCGCGCAGTTC CTT GAACAGC-CGC          TTGTCGTAGTTGGCG  60 290
    AHA_4130 4578871 .. 4578883 +  -9.1  -3.08679   GGCACCTATCTGGTG                GGCTG AGC CAGCC                TATTGCATAAAAACC  63 20
    AHA_4131 4579623 .. 4579642 +   -15  -4.63218   ATCAGACTCCACCCT            GGGCCACC GAGC GGTGGCCC             TTTTATTGCCCAGCG 100 120
    AHA_4141 NONE
    AHA_4142 NONE
    AHA_4143 NONE
    AHA_4144 NONE
    AHA_4145 4593042 .. 4593058 +  -5.7  -5.14563   AGACCCGGCGCCTTC              GGGTAGG CTA CCAGCCC              TTTTTTGCTAAGGAG  90 74
    AHA_4146 NONE
    AHA_4147 4595016 .. 4595030 +  -2.7  -2.62983   ATCGTTTGGAATACA               CCCTG CGCGA CTGGG               TGCTCTAGGGCTCAC  40 3
    AHA_4148 NONE
    AHA_4149 4597804 .. 4597823 +  -9.3  -5.06414   CTAGGCGTCAAAAAA            GCGGAAC CCCGGT GTTCCGC             TTTTTGTTAAAGCCC 100 37
    AHA_4150 NONE
        flmB 4600132 .. 4600145 +  -4.5  -3.14132   AACAAGGTTATAGAG               GTCCT CAGG AGGGC                TTAATCAAGCACGAA  47 8
    AHA_4178 NONE
    AHA_4179 NONE
        nueB NONE
    AHA_4181 NONE
    AHA_4182 4632402 .. 4632414 +  -4.8  -3.28712   GGCCATGTCCAACGC                CTCC GAGTA GGAG                TTGTCACGCCGCCAG  49 48
    AHA_4184 4633000 .. 4633023 +  -7.4  -3.05844   GGTGGCCAAGCACAT          GCC-GACCGAT GCG ATCGGCCAGGC          TGTTGCCCTGGCGGG  54 518
        trmA 4640205 .. 4640222 + -12.7  -4.14764   TCTCGACCAGCAAGA             CAGGGCC CGCG GGCCCTG              TTTGATTATTTAACC  95 156
    AHA_4192 NONE
    AHA_4193 NONE
    AHA_4194 4642730 .. 4642750 + -16.1  -4.02581   TTCCCGTAATAAAAA            GGGGCCCCG ACA TGGGGCCCC            TTCTGTTTTCTGCGC 100 54
        priA 4648414 .. 4648444 + -10.3  -2.75963   GTAGCTGATGGTGAA       GCGGCCGCTGGCG CGCTT CGTCAGCGACCGG       GTTTGCCATGCGAGT  66 52
    AHA_4206 NONE
    AHA_4207 NONE
    AHA_4209 4661735 .. 4661750 +  -4.6  -3.33737   CTGGCCCAGCAGACA              GGCGCT GACC AGCACC               TTGTGCACGTTGGTC  51 418
    AHA_4211 4663309 .. 4663327 +  -3.1  -2.85351   GGGAGCGCTCTTGCG            TTCACCCG CCTG CGGG-GAG             TCTGATATGCCACCC  41 102
        pncB 4664579 .. 4664598 + -11.4   -4.1891   ATGACCCCTTTGCAA            GGTCCGAC TCGT GTCGGGCC             TTTCTCTTGCCCGCA  88 92
        phnD NONE
        phnC NONE
        phnE 4667832 .. 4667855 + -19.6  -5.15634   CCCAAAAAGCAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTTCATCGGGTC 100 82
    AHA_4225 4678394 .. 4678416 + -17.8  -4.06502   GAGTAATCGATACAA           GAAGCCCGTC AAC GACGGGCTTC           TTTCATTTAACAATG 100 35
    AHA_4227 4680020 .. 4680035 +    -4  -3.17051   CGCATCGGGCGGGCT              CATGGT CGGG ACTATG               TATTGCTGGTCCGGA  47 427
    AHA_4233 4687279 .. 4687296 +  -2.7  -3.75153   CTGTTTCACAATTGT             TGAATGT CAGC ACAATCA              TTTGAATTCACCGCA  51 44
         kbl 4688577 .. 4688591 +  -8.5  -4.11304   TCTGATTTGAATCAA               GGGGC CTGGC GCCCC               TTCTTTCTGCATTCA  77 36
         tdh 4689675 .. 4689698 + -15.4  -5.40072   TCCCGCCCATGAGAT          GAAACCCGGT GAAA ACCGGGTTTC           TTTTTTTCGGGCCAG 100 49
    AHA_4236 4690312 .. 4690341 + -20.9  -2.82933   ACAAGCTCTAAGTGT       TTGAAAGGGCCGC ATTT GCGGCCCTTTCAA        TCTGATGACTTCCGG 100 30
    AHA_4237 4693022 .. 4693042 +    -4  -3.15861   CAGCCCCTTGGAGGC            GTGCAG GGTCATCAG CTGCAC            TTGGTCAGCCTCGTC  47 369
    AHA_4239 NONE
    AHA_4240 4696530 .. 4696557 +  -9.2  -2.98947   TCTAACCCGCCTTGT        CGGTCGATTAGGC TTC GCC-AATCGACCC        TGCTTCTTCATTCCC  62 36
    AHA_4253 4708961 .. 4708977 + -13.7  -4.98531   CCAGACAAACAAAAA              GAGCCGC AAT GCGGCTC              TTTTTCATTTCCGGC 100 52
    AHA_4256 4712436 .. 4712450 +  -4.2  -3.06183   CCCATCGCGGGCTGG               GCTACA GCC TGGAGC               TTGCATGAGACTCGG  47 3
    AHA_4257 4713911 .. 4713928 +  -8.4  -4.15143   CATTCCCCACACAAA             GCGGCA TTAGAC TGCCGC              TTTCTCTCATTCATT  77 60
    AHA_4258 4714763 .. 4714779 + -15.1  -5.61596   CCTGTGATACCCAGA              CCGGCGC CAG GCGCCGG              TTTTTTTATCCCCCT 100 34
    AHA_4259 4716243 .. 4716262 + -16.4  -3.89336   GAACTGAAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTTGCATTTCATTGA 100 34
    AHA_4275 4732571 .. 4732593 + -15.6  -4.19746   CTGGTAATCGAAGTG           GGGCGGGAAT TGG GTTCCCGCCC           TTCTTTTCACCTGCA 100 34
    AHA_4276 NONE
    AHA_4277 NONE
    AHA_4278 NONE
    AHA_4279 4738040 .. 4738058 + -13.1  -4.43477   AAATGCACAAAAAAA             GCCCGGG ATGAA CCCGGGC             TTTTCATTGCCTGCC 100 54
    AHA_4287 NONE
    AHA_4286 NONE
    AHA_4285 4742158 .. 4742172 - -12.8   -5.4505   TCCTCCAATAAAAAA               GGCGGC AAT GCCGCC               AAAGAGAGAGCTATT 100 36
        rpmH NONE
        rnpA NONE
    AHA_4282 NONE
    AHA_4281 4739503 .. 4739520 - -14.1  -5.46657   CATTGTAATAAAAAA             GGCGGCC CGAA GGCCGCC              TCTTTTGTCATCCAT 100 58
        trmE 4738040 .. 4738058 - -13.1  -5.68039   AAATGCACAAAAAAA             GCCCGGG ATGAA CCCGGGC             TTTTCATTGCCTGCC 100 49
    AHA_4274 4729244 .. 4729264 -  -6.9  -3.46914   AGGATCCACTAAATA            GATCTTAAG GAT CTTTAGATC            GATCTTTTATTGGAT  60 382
        gidA NONE
        gidB NONE
    AHA_4271 NONE
    AHA_4270 4724667 .. 4724677 -  -6.8  -5.11033   CAGAACTGTAAAAAA                 TCGG GAT CCGA                 AGACCCCGCGTTTAC  86 188
        atpI NONE
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA NONE
        atpG NONE
        atpD 4718153 .. 4718163 -  -5.4  -2.75963   ACGTCCAGGTGAAAG                 GAGA TCA TCTC                 TGCCATGGGCCCTCC  47 50
        atpC 4717708 .. 4717723 - -10.4  -6.17184   ACGAGTAAAAAAAAA              GCGACC CGCA GGTCGC               TTTTTACCTCACCGT 100 43
        glmU 4716243 .. 4716262 - -16.4  -5.13343   GAACTGAAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTTGCATTTCATTGA 100 48
        srlR 4710835 .. 4710849 -  -4.2  -3.05498   GATGCCACACATACA               CTTCTC CTT GAGATG               CAAATCGTAAAGTCA  47 64
        glmS 4708945 .. 4708992 - -15.8  -3.17219   CATAACGGCCACCAA GCCAGACAAACAAAAAGAGCCGC AAT GCGGCTCTTTTTCATT-TCCGGC GACGGCTTATTCCAC 100 32
    AHA_4252 NONE
    AHA_4251 NONE
    AHA_4250 NONE
    AHA_4249 NONE
      tonB-2 4704442 .. 4704455 -  -3.1  -2.79302   ACCAGGGCCAGCACA               CAGAT CCAG ATCCG                CAACATAGTTATGAC  41 34
    AHA_4247 4703244 .. 4703280 - -18.1  -4.56597   TCGTTTGCTGAAAAA    GCAGGCTGAAGCCTCTA AAA CAAGGGCTTCAGCCTGC    TTTCACGCCGCTTTT 100 28
        rrsJ 4701244 .. 4701261 -  -7.7  -2.93252   AGGGTTGAACAAGCA             CTGACGC TTTC GCATCAG              GTCTTTGCTCTAACT  56 90
    AHA_4245 4701001 .. 4701029 - -11.9  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAC GTA ATGCTTATGTCTG        CATTCTTGTTGGCAA 100 50
        rrlJ NONE
        rrfJ 4697664 .. 4697677 -  -5.3  -3.18264   CCTCGCAGCCAGTAA               TGTGA TTCT TCACA                TCACTGTTTGATTGG  52 42
    AHA_4242 4697490 .. 4697509 - -13.6  -5.72207   CGGAAACGAAAAAAA            GCCCAGTC TTTC GACTGGGC             TTCTTGTTAGTGGCG 100 36
    AHA_4241 4696453 .. 4696484 - -12.4  -3.53733   GGGACTTGAGAAACA      CT-TGAGCCCGTCAC GGG GCAACGGGCTCAGAG      CTATCGTGTTGGCAA  81 78
         rep 4692552 .. 4692568 -  -4.3   -4.1899   GGAGGGCATCGAAAA              CCAGCAG CAA CTGCAGA              AACTGATCGATCTGG  63 143
        rfaD 4685495 .. 4685514 -  -7.8  -4.20531   TATAGCGATGTAAAA            CTCACCCG TTAG CGGTTGAG             CCACGCCATATAATC  74 14
    AHA_4231 4683630 .. 4683643 -  -3.1  -3.14931   TTTACTGGGCATCAA               TCAAG ACTT CCTGA                AGACATAGTTACCCC  43 12
    AHA_4230 NONE
    AHA_4229 4681712 .. 4681745 -  -6.7  -3.09492   TCGGCAAGGCTAACA     GGGC-TGCCAACCG ACAGCCA CCGTCGGCACGCCC     AGTGCTATTTCAGAT  54 30
    AHA_4228 4680611 .. 4680624 -  -2.3  -4.59773   GTTGAGTTGGAAAAA               GGATG ATAA CAGCC                TGACGCGACTAGAGC  65 34
    AHA_4226 4679231 .. 4679249 -  -4.4  -3.47307   GGAAGAGGAGTACAA             CCGCGGCC TGA AACCGCTG             CTGCCCGCAGCCCTG  52 235
         rph 4676633 .. 4676648 -  -7.5  -5.60993   TGGGGTATAAAAAAA              CGCGG TCAATG CCGCG               TTTTTAAAATCATGC 100 35
        pyrE 4675862 .. 4675898 - -22.5  -5.52384   TGCGGATGAAAAAAA    CGGTGCCCGTTTGCT GCCAGAG AGCAAACGGGCACCG    CCTTCAACGATTGTG 100 57
        copA NONE
        cueR 4672925 .. 4672935 -  -8.2  -2.87132   GCCTGCCGGCAGAGA                 CGGC TCA GCCG                 CGCTCCAGCTCGTCG  59 19
    AHA_4220 4671656 .. 4671670 -  -2.1  -3.11732   GTGAAACTCAGGCAA               CCTTA CCCAT CAAGG               CTACTTCGATACGAT  42 3
    AHA_4219 4671277 .. 4671302 -  -7.5   -5.5604   TCAAGCAACAAAAAA         GACGTATCGCC AGTT GACGAAACGCC          TTTTTGAGAGATTCT 100 77
        ccoG 4669621 .. 4669638 - -14.1  -3.99592   ATCCACCATGAGAAA             GGGGCGC CGTT GCGCCCC              ATTCTATCACTACTG 100 93
    AHA_4217 NONE
        dsbA 4667832 .. 4667855 - -19.6  -5.18355   CCCAAAAAGCAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTTCATCGGGTC 100 49
    AHA_4210 4661798 .. 4661833 -  -4.6  -4.07568   CCCCGCTGGCTAAAA    CCTGGGCCCTCG-TCGC GCA ACGAACATGGACCCAGC    AGACAAGCACTCACC  62 63
    AHA_4208 4661092 .. 4661118 -  -4.3  -3.62591   CGGACAACCCCGAAA         CCCCCTTCAAG GATTT CCTGATGGGGC         GGATGAAGCGCATCC  55 195
    AHA_4205 4657492 .. 4657515 - -15.3  -5.75342   GTGGTCGAAAAAAAA          CCCCCGAGC TGTGAG GCTCGGGGG           TCGCTTGTTTCGTTC 100 56
      ilvB-2 4655731 .. 4655753 -  -4.1  -3.59262   GCGCAGAGGTTGAAA          CCGC-GGTGA CGAA CCACCCGCAG           CACCCGCTCCATCAC  51 85
        ilvE 4654577 .. 4654603 -  -4.2  -2.53876   CCTGACCGGAAGCGA         CTCGGGGAGGCA TGG CGCCTCCCCTCT         GCAATCAGTCGTTAA  43 30
        ilvD NONE
        ilvA 4651059 .. 4651077 -   -16  -4.72986   CAGCGCCATGAAAAA             GGGAGGCC GAT GGCCTCCC             TCTTGCTGCTTGCAA 100 46
    AHA_4200 4649702 .. 4649719 - -12.7   -4.4078   TGGCGGCAATGAAAA             GGGAGGC TTGA GCCTCCC              TTGTCGTTCATGTTG 100 50
    AHA_4199 4648276 .. 4648294 -  -5.2  -3.55444   GGTGCAGGGGCCAAA             CCGGGC ACCACTG GCCCAG             CTACTGGACTGGGCG  55 198
        rpmE 4645767 .. 4645797 - -19.2  -3.17219   CAGAACGCCGACCAA       TAAAAAAGGCGCCC ATT GGGCGCCTTTTTCA       GAATTCTTCAGAAGT 100 45
    AHA_4196 4644107 .. 4644124 -  -6.3  -3.96148   GCTGGGGATCATAAA             GAAAACC ATCG GGCTTTC              ACAGAGGAAAGTATC  65 117
    AHA_4195 4642730 .. 4642750 - -15.4  -5.06414   TTCCCGTAATAAAAA            GGGGCCCC GACAT GGGGCCCC            TTCTGTTTTCTGCGC 100 53
    AHA_4190 4637563 .. 4637601 - -18.3  -4.59773   CCGGATCGGGAAAAA  GGCCAGTTTGCCAGCCCC CGCA GGAGCTGGCAAAC-AGCC   GGTCATGGTCCTCGA 100 52
    AHA_4189 4636986 .. 4636999 -  -3.9  -4.72986   GATCTTCATGAAAAA               CAAAA GCTT TTTTG                GCCGTATTCAGTAGT  72 33
    AHA_4188 NONE
    AHA_4187 NONE
    AHA_4186 NONE
    AHA_4185 NONE
    AHA_4183 4632233 .. 4632268 -  -7.6  -3.05596   GAGGTGCTCACCGAA    CAGGGCAAGCTGCCA CCCGGAC TGGTAGCC-GCCCTG    CTGCAGTGCCAGGAA  54 254
    AHA_4177 NONE
    AHA_4176 NONE
    AHA_4175 NONE
    AHA_4174 NONE
    AHA_4173 NONE
    AHA_4172 4622428 .. 4622439 -  -2.2  -2.53918   GGATGGGAGAAAATG                GGCA AGGC TACC                 GCACGGTCCCTGTCA  38 134
    AHA_4171 NONE
    AHA_4170 4620228 .. 4620250 -  -4.2  -2.65491   AAAGGTGATGACAAC           TGTCATATTA GCT CAATCTGACA           CTCAACGATAAATAT  44 71
    AHA_4169 NONE
    AHA_4168 NONE
    AHA_4167 NONE
        rfbF NONE
        rfbG 4613865 .. 4613882 -  -5.5  -4.20712   GACAATAGGGTAAAA             CGGCTCA TAGC TGAGCCT              CATAGGCTCTAATTT  65 12
      rfbC-2 NONE
    AHA_4163 NONE
    AHA_4162 NONE
    AHA_4161 NONE
    AHA_4160 4608996 .. 4609006 -    -4   -3.2891   TCTGACAATTAAAAT                 CATT TAA AATG                 CAACTGACCATCAAA  47 14
    AHA_4159 NONE
    AHA_4158 4605929 .. 4605941 -  -6.3  -5.34381   AAATGCAAACAAAAA                GCTTA TAG TAAGC                TACTCAAGCGTACCC  95 15
    AHA_4157 NONE
    AHA_4156 NONE
    AHA_4155 NONE
    AHA_4154 NONE
    AHA_4153 NONE
    AHA_4152 4599922 .. 4599944 -  -6.3  -3.72576   CTGTTTGTTATCAAA          GTACCTGCGG AACA CCGCAAG-AC           ACTTTTTGTACAGTT  62 359
    AHA_4140 NONE
    AHA_4139 NONE
        potF NONE
        potD 4583779 .. 4583810 -  -2.1  -4.42386   GGCCGATCCATAAAA      CAGTCTGGCGCCC CGGGAT GGGCGCCAAGGTT       AGGTTCCGGACTTGA  62 24
    AHA_4136 NONE
        potH NONE
        potI 4580780 .. 4580830 -  -9.2  -3.34398   CCTGGCCGCTAAAGA TGGAGATCCGCATTCTCATCCTC CGGATT GACGA-GAGAATGCGGATCTTAA CACGAGGTCAGGCGA  66 33
    AHA_4133 NONE
    AHA_4132 4579828 .. 4579847 -   -15  -4.24002   TGCCAAATGCGAAAA            GGCCGCTC TATT GAGCGGCC             TTTTCTAATGTGGTC 100 36
        recQ 4576375 .. 4576387 -  -6.2  -3.92542   GCCAGCCTCAAATAA                CCGG CGCGC CCGG                CAGACAGGTGCCGCC  65 81
    AHA_4127 NONE
    AHA_4126 4574151 .. 4574170 -  -8.6  -2.54896   GGGTTAGGGAACCCA            TACCGCCA CCAT TGGCGATA             ATTGAGGGGCGAGAT  56 101
    AHA_4125 4573411 .. 4573433 - -16.4  -5.63857   AAAAATGCAAAAAAA           TTGACCACCC CTG GGGTGGTCAA           TCTCGTCAGGCTTGT 100 31
    AHA_4123 4570646 .. 4570664 - -11.7   -4.1891   GCTTGGCAATAGAAA             GGGAGCC TTTAT GGCTCCC             TTGTTCATTCGGCGC  91 46
    AHA_4116 4560996 .. 4561018 - -14.9  -3.42574   TCAATCTCATCACAA           GACGCCTCC CCTGT GGAGGCGTC           TTTGTTTTCAGCCCC  95 33
    AHA_4111 NONE
    AHA_4110 NONE
    AHA_4109 4553925 .. 4553941 -  -9.4  -4.70266   AACACCATGCAAAAA              GGGACC TCGAG GGTCCC              TTTTTTATTGCCGCC  93 46
        galR 4545985 .. 4545998 -  -3.9  -2.98823   TCTCGCTCACACAGA               TGTAA ACGA TTACA                CTGAATTTGTTAAGT  44 146
        lacZ 4542665 .. 4542707 -  -3.8  -3.18274   GCCAGCCTAATGTAA TCAGTTTGTTGT-ATGA-CA ATCTG TGATCATGACAACAAAATGA AAACGTTTACACTCT  47 141
        mglB 4541567 .. 4541589 - -19.2  -2.64155   TCTGGTTGAAACTGA           GGGCAAGGGG AAA CCCCTTGCCC           GGGAGGAGGGAATTA 100 38
        mglA NONE
        mglC 4538964 .. 4538990 - -18.8  -3.29511   GGGATCCCTCCAGAA         GAGAGGGCTGGC ACT GCCAACCCTCTC         TGCCAATCGTTATTT 100 35
    AHA_4097 4537149 .. 4537174 - -12.5  -2.81045   TGAGCGATAAGACTA         TCGGGGGCGAC GCAA GTCGCCCCCAT          CTTTTTTGGCCATTT  76 66
      arcA-2 NONE
      arcC-2 4532316 .. 4532339 -  -4.6  -2.52676   GATTTGTTCAAGCCA          CGTAGGGCAGT AGC ACTGGC-TACG          CATTCTTCAGTACAG  43 49
      argF-2 4531193 .. 4531212 - -16.4  -4.10657   TCACATGGTCGAAAA            GCCGGGGG TCAC CCCCCGGC             ACCACTACTGCGACC 100 41
    AHA_4090 4529657 .. 4529675 -   -16  -5.64274   TCAGCCATAAAAAAA             CGGGAGCC AGC GGCTCCCG             TTTTCAGCTTTCTCT 100 51
    AHA_4085 4526279 .. 4526297 - -14.6   -4.4267   CCGGAAAAGCGAAAA             GCCAGCTC AAT GAGCTGGC             TTCTCTGAAAAATGG 100 38
    AHA_4084 4524607 .. 4524624 - -14.1  -4.05004   CCATGACAACAACAA             GGCCGCC CGCA GGCGGCC              TCCCATTCTCTGCCC 100 48
    AHA_4083 4522459 .. 4522478 -   -15  -4.56978   TCGTGAAACAAGAAA            GGGCAGCC CGCG GGCTGCCC             TTTTTCATGGACGTT 100 51
    AHA_4081 4519616 .. 4519652 - -10.9  -3.68024   TTTTGTAACAGACAA   GGGGCCGGCTACCCGCC AAATG AGCGGAT--CCGGCCCC   TGCTATTTAATCGTT  76 69
        pntA NONE
        pntB 4516127 .. 4516142 - -10.4   -5.5112   GTGAGTAATAAAAAA              GGAGGC CGGA GCCTCC               TTTTTTGCTTTCCTC 100 49
    AHA_4078 4515320 .. 4515335 -  -5.4  -2.64472   CAGCGGGGAAAGTCA              GAGCCCG TAA CGGG-TC              AGCAGGGATTGATAT  46 7
    AHA_4077 4513669 .. 4513694 -  -8.9  -4.91459   CAACAGGCAGAAAAA         CGGAGGGTGGC CTGC GCCACCCTCTT          GCATCACTCGGCCTT 100 29
    AHA_4076 4512059 .. 4512080 - -17.3  -3.05384   CTCCTTTCCATGCAA           CGGGGAGGG CATG CCCTCCCCG            CTCTCTCTTGTTTGC 100 77
    AHA_4075 4510584 .. 4510602 -   -16  -4.90013   CAACGCAATGAAAAA             CCGGAGCC CCT GGCTCCGG             TTTTTTTATGGGCGC 100 133
    AHA_4073 4508616 .. 4508651 - -21.2  -4.52589   CTCCTTCATATAAAA    CGGGGCCCCTTGGCTG CAAC CAGTCAAGGGGCCCCA     TATCAGGTCATGCAG 100 82
    AHA_4072 4507810 .. 4507824 -  -9.2  -2.74514   GCAAAGCGGGAAGCA               GGCAGG ATC CCCGCC               CGGCAAGATGCAGGG  60 53
        clpB 4505069 .. 4505087 - -11.7  -5.07652   CCCCTGAAAACAAAA             CGCAGGC ACGAG GCCTGCG             TTTTTCATCGACAAT 100 45
    AHA_4070 NONE
    AHA_4069 4503535 .. 4503588 -  -6.6  -3.12327   CCTGCACAGCGAAGA GCTGCTGACCCGCTACCCGGACCTCG ATGC CAAGGGGCGCG-AGCGGGCCATC-GC CAAAGAGCTGGGGGC  53 460
        asnC 4502184 .. 4502211 -  -8.3  -3.14344   CACCGTCTGGACCAA        GGCCAGGGCCG ATGCCA CTACCCCGGCC         CTGATGGCGGCCTAC  58 219
    AHA_4064 4500909 .. 4500921 -  -6.2  -3.26947   CAACGCCCAGATGAA                GGGC TGCCT GCCC                ACCTAAATCTGGTAG  54 28
    AHA_4063 NONE
    AHA_4061 NONE
    AHA_4060 NONE
    AHA_4059 4495619 .. 4495651 - -24.9  -3.90744   GCCGGTCTGAAACAA      GAGGGGCGGTCCGTC ATC GACGGGCCGCCCCTC      TGTCATTTATCCCTT 100 32
    AHA_4057 4494740 .. 4494750 -  -2.4  -4.75308   AGCAACATGGAAAAA                 CTCC CGG GGCG                 ATGAGGGTAACAATC  68 79
    AHA_4056 NONE
    AHA_4055 4493023 .. 4493039 -  -9.4  -5.21709   GGTGACATCAAAAAA              GAGGCC GACTA GGCCTC              TTTTTTATTGCGGGT 100 65
    AHA_4053 NONE
    AHA_4052 NONE
    AHA_4051 NONE
    AHA_4050 4489640 .. 4489658 - -13.1  -5.14163   AGTGAGCAACAAAAA             CGGCGCC ATCAA GGCGCCG             TTTTCTTATCTCGGT 100 127
        topB 4483297 .. 4483312 -  -4.6  -2.52464   GCTGGTGGCAAGCCA              CCCGCT GATG AGCTGG               CTCTATGCCGTGCTC  43 362
    AHA_4044 4481675 .. 4481696 - -14.4  -2.78596   CACCGGCTGATGACA           CCGGGGCC CGCCGC GGCCCCGG            TCATTCGCGCTGCCG  83 26
        murB NONE
    AHA_4040 4477484 .. 4477513 - -17.9  -3.29558   CAACACGAATCAACA       TGAAGAGGGGGCC CGCA GGCCCCCTCTTCT        ATTCATGACGATCGC 100 49
    AHA_4038 NONE
    AHA_4037 NONE
       tuf-2 4474665 .. 4474681 - -12.3  -4.30719   CCCCTGCATAAGAAA              GCCCCTA TTA TAGGGGC              TTTGCTTTATTTATG  93 52
    AHA_4035 4474556 .. 4474574 -  -2.3  -4.74917   ACCAAAGACACAAAA             GCCCCGT ACGAG ACGAGGT             ATATGGCAGGGGCGG  68 29
        secE NONE
        nusG 4473525 .. 4473557 -   -15   -4.3255   TCCCCAACTAATAAA      GGGGCAGCGAAT TATAATGAC ATTCGCTGCCCC      TGACAACCGTTAACG 100 53
        rplK NONE
        rplA 4472268 .. 4472303 - -15.8  -2.60571   AAGCCCCCAACCAAT    CAAGGCGCAAAATTATA GAT TA-AATTTTGCGCCTTG    TAAAATCCATCAATT  85 39
        rplJ 4471543 .. 4471554 -  -5.8  -3.54626   GAATAAACTCAAACA                GCCT AGAT AGGC                 GAGAATCAAGCAGCA  57 31
        rplL 4471079 .. 4471104 - -14.1  -4.64766   TCTACAGCGCAAAAA         GGCTGGTGAAC AAAA ATTCACCAGCC          CTAGCCTGTTTTATC 100 64
        rpoB 4466877 .. 4466892 -  -6.2  -3.63569   TCAATTCTCGAACAA              TAAGAG CGAG CTCTTA               CTCTTCGTCCAGCTC  60 23
        rpoC 4462452 .. 4462470 - -13.1  -5.56673   ATCGACAATAAAAAA             GGGCCCC ATGAA GGGGCCC             TTTTCAATCGCTACA 100 49
    AHA_4026 NONE
    AHA_4025 4461138 .. 4461155 - -12.7  -5.56264   GCCAAACACAAAAAA             GCCCCTC CTGG GAGGGGC              TCTTCGTGCAGCCTT 100 44
    AHA_4024 NONE
    AHA_4023 NONE
    AHA_4022 4459900 .. 4459923 -  -4.4   -4.6856   TAAACATGTGAAAAA          TCCTCCCCGC AGAT ACGGGGACGC           GAAATTTTATGCCCT  74 145
        rpsL NONE
        rpsG 4458888 .. 4458915 -  -9.8  -3.02023   CCCAGATAATTAAAG        GTGCGCAGAGCC AAAA GACCCTGCGCAA         GCGGATTACCAGCGG  67 31
        fusA 4456708 .. 4456729 - -15.9  -3.59979   TCCTTCTAGGTTAAA           CCCGCCTAC CGTC GTAGGCGGG            GAATCTTAAATTACT 100 36
       tuf-1 4455450 .. 4455479 - -17.3  -3.09772   TTAAAGCCCCAAAAG       TAAAAGGGGTGGC CGAA GCCACCCCTTTCA        TGTGCGTATTTAAAG 100 47
    AHA_4017 4454786 .. 4454798 -  -3.4  -4.69622   AGATAATTGCAAAAA                GATG GCTTT CATC                GTTCAACCGCTCATA  70 73
        rrsI 4452850 .. 4452860 -  -5.4  -3.53811   TGTACTGTCTCTAAA                 CTTG AAT CAAG                 GCAATCTGTGTGAAC  55 62
    AHA_4015 NONE
    AHA_4014 4452442 .. 4452460 -  -8.8  -3.70081   ATACAACCCCAAGAA             GTGTCGGT GAA ACCGACGC             AGCTTGTTGTCGTAC  70 231
        rrlI NONE
        rrfI 4449314 .. 4449327 -  -5.3  -3.18264   CCTCGCAGCCAGTAA               TGTGA TTCT TCACA                TCACTGTTTGATTGG  52 42
    AHA_4011 4449139 .. 4449158 - -13.6  -5.72207   CGGAAACGAAAAAAA            GCCCAGTC GTTA GACTGGGC             TTCTTAAGTAGTGGC 100 37
    AHA_4009 4447123 .. 4447140 - -10.5  -5.12068   CACAGCCAACAAAAA             GGGCCCC CGCA GGAGCCC              TTCACGTCAACCGGG 100 45
        dhaK NONE
    AHA_4007 NONE
    AHA_4006 4444490 .. 4444504 -  -2.7  -2.60615   AGCGCCTTGAAACAG               TGGCG TCAGT CGCCG               AAGCGCTCCGCAGCC  40 16
        gldA 4443222 .. 4443241 - -16.4  -4.48987   CGCTGACAACGAAAA            GGCCCCGC AGAT GCGGGGCC             GTTTTTATATGGCAA 100 58
    AHA_4002 4438973 .. 4439002 - -22.3  -4.03413   ATGGGCGGAGACAAA       TAACCCGGGGCGT CGCA ACGCCCCGGGTTA        TCAGTCGGTAGGGAA 100 44
    AHA_4001 4437243 .. 4437263 - -12.5  -3.86015   CATCGCTGGTACAAA            GAGCCGCCC ATC GGGTGGCTC            TTTTGTTTATTACCG  90 183
    AHA_3998 4434103 .. 4434124 - -15.9  -3.77489   AACCCAAGATGCAAA           CAGGCCACC CGAA GGTGGCCTG            TTTCATGGTGCGATC 100 44
    AHA_3995 4431151 .. 4431167 - -12.3   -5.5112   GTGATGAATAAAAAA              CAGAGCC CAA GGCTCTG              TTTTCACTGCTGTAT 100 233
    AHA_3993 NONE
    AHA_3992 4427911 .. 4427941 - -20.6  -3.61178   GCCAGTGACCCCAAA       CAAAACGAGGCGCC CAG GGCGCCTCGTTTTA       TGGCCGTACGCCTAG 100 37
    AHA_3989 4424543 .. 4424564 - -14.5  -3.33696   GGCCTCCTGAATGAA           GAAGAGGCC CTCA GGCCTCTTC            TTTGCTCAGCAGTGC  95 14
    AHA_3982 4418162 .. 4418189 -  -6.2  -3.42503   CCCCAATATCGACAA        CTGATCCCGGCGG ATC CTGC-GGGATCCG        CCTCCCTTTCCACAC  56 68
    AHA_3979 NONE
    AHA_3978 NONE
    AHA_3977 4414240 .. 4414259 -   -15    -5.252   GACGGGCATAAAAAA            GCCGGTGC GATT GCACCGGC             CAAAAGGCGTTGGAA 100 61
        recC NONE
        recB NONE
        recD 4405008 .. 4405045 - -13.8  -3.53811   TGCATTTCGCTGAAA   TATTG-ATGGCGGTAAA TTTCG TTTACCGCCATCCAATA   GTTCACTCCCCCAAC  89 28
    AHA_3971 4402234 .. 4402249 -  -4.6  -3.01422   GATGTTGAGAAATGA              CAGCGG CAGA CGGCTG               CACAGCCCGCTATCC  47 133
    AHA_3970 4401114 .. 4401136 -  -2.6  -3.56325   GGGGGATAACCAGAA           TAATCCGACA TGA CGGCGGCTTA           GCCGGACCACCGACG  47 56
    AHA_3969 4400548 .. 4400563 - -11.8   -4.8269   GACAAGCAGCAAAAA              GGGGCC CTCG GGCCCC               TTTTTTCATGCACGT 100 50
    AHA_3966 NONE
    AHA_3965 4397025 .. 4397054 - -12.2  -5.47159   GTGCAAGATAAAAAA       CGGGGAGAA-GGC TGGTC GCCATCCTCCCCG       CCCTGCTCCCGCCGC 100 43
    AHA_3964 4395202 .. 4395221 -  -2.8  -3.70149   GGCAGACCACCGAAA            CCGTCAGCC TCT GG-TCACGG            GTCAACTTCCGCAGC  54 285
    AHA_3959 4390530 .. 4390549 - -11.4  -4.89567   CCTGAAAACATAAAA            GCCAGCCC GAAA AGGCTGGC             TTTTTGTTACTGGCT 100 67
    AHA_3956 4387753 .. 4387765 -  -3.4  -2.82327   GCTCGATACGGAAAC                CTGA GCGAG TCAG                TATGGCATAGAGACT  41 82
        uvrA 4384861 .. 4384881 - -16.9  -5.22006   TTACCACAATAAAAA            CAAGGGGCC CAG GGCCCCTTG            TCACATTATTGAACG 100 43
    AHA_3954 4382984 .. 4382994 -  -6.8  -2.98789   AGGGACAAAATAGTA                 GCCA TAC TGGC                 AGCCATCTGGGGTAT  53 104
    AHA_3953 4381942 .. 4381963 -  -8.6  -4.07568   GCTTTGCGCGTAAAA           GGGCCCGG ACTGTG CCGGGCCA            AAGAGACATGCTAGC  77 77
    AHA_3952 NONE
    AHA_3951 4378285 .. 4378304 -   -15  -4.97158   TGACAGCAAAGAAAA            CGGGAGGC TGAT GCCTCCCG             TTGTTTATCTACCGG 100 44
        metF 4376201 .. 4376221 - -14.1  -5.55769   CGCCATAACAAAAAA            GCCAATGAG CGA CTCATTGGC            TTTTTTTGTGCCCGC 100 47
    AHA_3946 NONE
        rrsH 4369828 .. 4369838 -  -5.4  -3.53811   TGTACTGTCTCTAAA                 CTTG AAT CAAG                 GCAATCTGTGTGAAC  55 62
    AHA_3943 NONE
    AHA_3942 4369420 .. 4369438 -  -8.8  -3.70081   ATACAACCCCAAGAA             GTGTCGGT GAA ACCGACGC             AGCTTGTTGTCGTAC  70 231
        rrlH NONE
        rrfH 4366288 .. 4366307 -   -15   -5.4833   TCAGGCAATAAAAAA            CCCCGCTC ATCT GAGCGGGG             TTTCTCGTGTTGGGT 100 40
    AHA_3939 4365663 .. 4365693 - -18.4  -3.89524   AGCTGATGGCAGAAA       GCAAAACACCGGCC TAT GGCCGGTGTTTTGA       GAAGACAGTGAGCAG 100 43
    AHA_3938 4362367 .. 4362395 - -13.2  -4.07455   GATGAACAGTACAAA        TAAAACGGGGCC GATAT GGCCCCGTTTTC        GTGTCACTGCAGCAG 100 41
    AHA_3936 4360289 .. 4360311 - -20.6   -4.9725   ACGCCGATACAAAAA           GGCCCCTCGC ACT GCGAGGGGCC           TTTTTCATGGCTGCA 100 58
        kdsD NONE
    AHA_3927 NONE
    AHA_3926 NONE
    AHA_3925 NONE
    AHA_3924 NONE
        rpoN 4350682 .. 4350696 -  -2.1  -2.71712   TTGTTTTGCCTAAAC              CAGGCG TTTG CGC-TG               ATTGGATGGCGGGAT  39 5
      yfiA-2 NONE
    AHA_3921 NONE
    AHA_3920 NONE
    AHA_3919 4348632 .. 4348651 - -13.6  -4.90266   CTGATGAACGAAAAA            GCCAGCAG GAGT CTGCTGGC             TTGTCGGGATTTTGC 100 90
    AHA_3906 4336355 .. 4336382 -  -7.1  -3.15999   CTGTTACAGACCCAA        TTGCTTATGGG GGCTCT CCCACAAACAA         CAAACGATGGCCTAC  54 231
        rplM NONE
        rpsI 4335429 .. 4335447 - -11.7  -5.84381   TTACCAATAAAAAAA             GCCTGGC ACATG GCCAGGC             TTTTTTGACACTCGC 100 63
        petA 4334596 .. 4334614 -    -3  -3.35046   TCAGTTTGGCAAACA             TGGTCAGG CCT CCTTGCCA             TCGGCACCGACCAGG  47 10
        petB NONE
    AHA_3901 4332590 .. 4332620 - -14.9  -4.27774   ATTAAAAAGCAGAAA      CGGCAATGAAG-CC TCTT GGTCTTCATTGCCG       TGCATTATATTACCC 100 53
        sspA NONE
        sspB 4331487 .. 4331504 - -12.7  -5.60993   CTCGGCATAAAAAAA             CGCAGCC AGTT GGCTGCG              TTTTTTATTTGATGA 100 30
    AHA_3894 4326725 .. 4326741 -  -6.5  -2.60244   GGCTCAAGCAACCTA              CCCGC CCCCAAC GCGGG              CCGCGCCAATAGGGG  51 424
        mraZ NONE
        mraW NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD 4317509 .. 4317526 -  -2.6  -2.77013   CAGCGCTGCAAGAAG             CCTGCG ACTGCG CGAAGG              GCGTTCATAACTTCT  39 30
        ftsW NONE
        murG NONE
        murC 4313653 .. 4313676 -  -5.2  -2.62735   AGAGGCCCCACATGA          CCAGGATGAA AAAT CCCACCCCGG           CGATGAAGCCCCCCT  46 166
        ftsQ NONE
        ftsA 4311734 .. 4311744 -  -3.2  -2.59323   AAAATCTTTTAGAAC                 TCGC CAC GCAA                 CCAGTTGCTGACCCG  40 8
        ftsZ 4310521 .. 4310534 -  -2.3  -3.25779   GCAACAAACAAACCA               GCGTC ATTG GAGGC                TTAGTCGGCTTGCTT  43 26
        lpxC 4309464 .. 4309498 - -15.8  -3.20639   GGAGTAAACAAATGA     CGGAACGTCGGTGC GGAGAGA GGACCGACGTTCCG     TTGCACAGCTATCAG 100 37
    AHA_3878 NONE
        secA 4305645 .. 4305666 - -15.9  -3.51232   CCTGCCGGAAATGAA           TGCACCGCC CGGA GGCGGTGCA            TCATCGTCATTGCGC 100 43
    AHA_3876 NONE
    AHA_3875 4303958 .. 4303972 - -12.8  -4.90266   GCCAGCAATCAAAAA               GGGCCG ATA CGGCCC               TTTTTATTTTGGTAT 100 56
    AHA_3865 4295468 .. 4295490 - -11.3  -5.12971   AACAGCCAACAAAAA           TGGCCTGCC ATAAA GGCAAGCCA           TTGTTTTAAAAACAC 100 60
        pdhR NONE
        aceE NONE
        aceF 4289709 .. 4289729 - -11.8  -4.95876   AATGAGAAGTAAAAA            GGGCAGGC TCTGG GCCCGCCC            TCTCACTTACAGGAC 100 32
        lpdA 4288114 .. 4288143 - -13.7  -4.61231   GCAGACGCTGAAAAA       CAAAAAGCCGCTC GATT GAGCGGCTTTTTT        ACAGGCAGAAGCGAA 100 41
    AHA_3857 4281569 .. 4281581 -  -2.6  -2.79212   AAGTTAACAAAAAGG                CAGC ATTTG GCCG                TTATTCGAATGTGCT  39 26
        acnB 4278699 .. 4278716 - -14.1  -5.33026   GAATGCAAACAAAAA             CCCCGGC ACGG GCCGGGG              CTTTGCATCAGCACG 100 65
    AHA_3855 4276720 .. 4276776 - -14.9  -3.19602   GCCTGCACACCAAGA CCCGGCCGGGAGCCTGGCAGGAGTGGT TGC AGCACGCCGGCCAGTCCGCCGGCGAGG AGGCGCCGGGGCAGA  80 266
    AHA_3853 4275386 .. 4275404 - -14.6  -3.01791   AGTCGGGGGTGAATA             GGGGAGAG CGC CTCTCCCC             TCACCTCAGCGCGTC  91 31
    AHA_3852 NONE
    AHA_3851 4272724 .. 4272743 - -11.4  -5.71712   CTTCAGACAAAAAAA            GACCCGCA CAAG CGCGGGTC             ATCTCATTACATCAG 100 37
    AHA_3850 4271231 .. 4271279 - -17.3  -3.53012   CCTTCCTGCTGGAAA CCGCCCACCTGGCCGGGCTGCTG ACC CAGCTGCCCTGCAAGGTGAGCTA CCTGCCGGCCCCCTG 100 51
    AHA_3846 NONE
    AHA_3845 NONE
    AHA_3844 4268722 .. 4268740 -  -4.4  -2.72511   GCTATCTGGGCAAAT             GGTGCCGG CTA CCGGAATC             GAACTGGTGACCTAC  45 6
    AHA_3843 4268615 .. 4268626 -    -3  -2.64091   AACTATCGGAGACCA                GATA TCGC TATC                 TCATCGCCTTGATTG  40 41
    AHA_3842 4268493 .. 4268512 - -13.6  -5.31519   ACAGGCAAAGAAAAA            GCCCAGCA TTGC TGCTGGGC             TTTTGAATTGGCTCC 100 34
    AHA_3841 4266837 .. 4266849 -  -5.5  -3.29461   CAAGCTGTTCCACAA                CCCCT GCC AGGAG                GCCTTCTGGCTCAAA  52 95
    AHA_3840 4265855 .. 4265868 -  -3.8  -3.84406   GCGGCAGTATAACAA               CTGG GGCCTG CCAG                CGAAACAAGGGGGGA  56 88
    AHA_3839 4264376 .. 4264403 -   -20  -3.05384   CGGTCGGCCACGCAA        GCAAAAGGGCGC CGAG GCGCCCTTTTGC         TGCTTGATGGCTCAC 100 37
    AHA_3836 4262377 .. 4262413 -  -6.5  -3.14132   GCCGGCGGTCATCAA   GGCGCTGC-GCAGCCTG CTGGC CCGGCTGCTGCCGC-CC   GCTACCACTCGATAG  54 27
    AHA_3834 4259639 .. 4259661 -  -4.1  -3.47491   AAGTGACAACAAAAG          GTCCGGCGAG CCAG CTCGCCT-AC           GGGAAGGGATTGAAA  51 74
         bfr 4259043 .. 4259056 -  -9.5  -5.24989   CCAGACATTAAAAAA               CCCGC CGCA GCGGG                TTTTTTAATCGTTTT 100 57
    AHA_3832 NONE
        mgsA 4256195 .. 4256216 - -17.3  -5.06414   TCCCGCCAATAAAAA           GAGCCGGCC CCTT GGCCGGCTC            TGTCGTTTCTGCCCC 100 42
    AHA_3829 4254162 .. 4254182 - -14.7  -5.22006   TGATGACAACAAAAA            GGGCGGGAC AAG ATCCCGCCC            TTTTGCATGCGATGC 100 51
        treR 4250523 .. 4250537 -  -5.7  -4.85599   CCGAGCTCACAAAAA               GCACA GTTTT TGTGC               AGGACTAGGTGATGG  83 44
        treP 4248898 .. 4248923 - -14.7  -2.88788   CGAATGAAAAAGGGA         GAGGGCGACCC CTGC GGGTCGCCCTG          ATGCGTGGGATCAGG  86 36
        treC NONE
    AHA_3822 4246566 .. 4246589 -   -21  -4.12532   GGCGCCAGATATAAA          CCGGGGCGGG ATTG CCCGCCCCGG           CTGGGTCAGACCGCC 100 31
    AHA_3820 4245051 .. 4245071 -  -8.1  -2.62184   GGGCCCGGCAGATCA            CGCTGGCTC GGT GCGCCGGCG            CCCGCCTTGCCAGGT  56 2
    AHA_3819 4244248 .. 4244277 - -18.7  -4.43012   AGCCGAAGACGAAAA       GCAGAAGGCCCCGC ATG GCGGGGCCTTCT-C       TCTGAGCACTCTGCA 100 128
    AHA_3810 4235144 .. 4235167 - -16.8  -4.21462   ATTCATTATGCAAAA          GGCCCATCAC GAAA GTGATGGGCC           TTTTGTTTTTACCCC 100 364
      dapA-2 NONE
    AHA_3800 NONE
    AHA_3799 NONE
    AHA_3798 4225648 .. 4225688 -  -3.1  -3.53224   CAGCGTGCCCGCAAA CCCCGCGTCTCCATGGCG CCGCGC CCCCATGGCG-CGCCCGG  TCGTTACGACGACAA  49 208
    AHA_3796 NONE
    AHA_3795 NONE
    AHA_3794 4221653 .. 4221672 -   -15  -5.30155   CCACGAATGAAAAAA            CGGGAGGC CAAG GCCTCCCG             TTCCATTTTGGGTCG 100 56
    AHA_3792 4219538 .. 4219557 -   -15   -4.7497   CCCACTGATGAAAAA            GGGCCGAC GACA GTCGGCCC             TTTTTTGTTGTGCTG 100 59
    AHA_3790 4217846 .. 4217866 - -18.3   -4.7219   CAGACCAAGACAAAA            GGGCGCCTC ATG GAGGCGCCC            TTGTTACGTCTGGCG 100 55
    AHA_3784 4211205 .. 4211225 - -18.3  -4.90266   CGCAGCAATGAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTGTCCATGTT 100 56
    AHA_3779 4206708 .. 4206724 -  -4.3  -3.26471   CGACGGCCACAGCAA              CCAGCTG CTG CAGGCGG              TGACCGCCGACTTCA  48 400
    AHA_3777 4205056 .. 4205067 -  -7.2  -3.64703   CTCCTTGTACTCAAA                CCCG GATC CGGG                 TGGTGATGTCGGTGG  65 9
    AHA_3776 NONE
    AHA_3775 4203856 .. 4203877 - -17.3  -3.68767   AGACGGCAAAAGCAA           CAGGGCGGC CATG GCCGCCCTG            GTTTATTCAAGCGCC 100 32
    AHA_3774 4202359 .. 4202397 -  -2.2  -4.16016   CCATCGGGGAATAAA  GGCGTGAGCGGGCCTGC TACTGT GCAGGCCAGC-CTCGTT   TACGGGAGCATGTCC  56 25
    AHA_3770 4198598 .. 4198614 - -12.3  -5.31519   ACAGCTAAAGAAAAA              GGTGAGC CAG GCTCACC              TTTTTGCATTGCAGG 100 60
        hldE 4195183 .. 4195200 - -12.7  -4.86621   ATCGGCAATGAAAAA             GGCGACC TTAT GGTCGCC              TTTTTGTTATCCGGG 100 88
    AHA_3765 4192880 .. 4192894 -  -7.8  -2.77899   CCTGGGTATGAACGA               GCGCCA CCT TAGCGC               CCCGCCAGCCAGCGG  55 19
    AHA_3764 NONE
    AHA_3763 NONE
    AHA_3762 NONE
    AHA_3761 NONE
    AHA_3760 4189922 .. 4189934 -  -4.8  -2.67992   TACAGGAGCAGATGA                GACC CTGTC GGTC                AGACCAGCCGATCCG  44 24
    AHA_3759 NONE
    AHA_3758 NONE
    AHA_3757 4186610 .. 4186623 -  -2.3  -2.80935   ATTGTATTGAGTAGA               CATGG AGGG CCTTG                CGAATTGACGTTTGG  39 129
        parE 4184685 .. 4184713 - -10.1  -2.72144   CGACTCCGGCTAAAT        GCTTGCCGGCCCC GAC AGGGCCGGCCGAC        GGCTTAGATGATGGC  64 29
        parC 4182297 .. 4182319 - -16.4  -5.60993   TTTTTCACAAAAAAA           TGGGAGCGAA TAA TTCGCTCCCA           TCTTGTATAGATCCG 100 45
    AHA_3754 4181098 .. 4181112 -  -3.6   -2.5789   CGAAACATCATGAAT               TATCAG TAA CTAATA               CCGGTAAAGCCTCAG  42 113
    AHA_3752 4178470 .. 4178509 -  -3.4  -3.92641   AAGCTCAGTCAGAAA  GAGCCACTGCGAGTAC TGGGGGTG GAACTCGACGGGGCTC   ACACCGGCGGCAGTG  56 382
        plsC 4170047 .. 4170063 - -13.7   -5.5112   TTCACCAATAAAAAA              GGGAGCC GGT GGCTCCC              TCATGCAATCAGCGG 100 46
    AHA_3739 NONE
    AHA_3738 NONE
        pspG 4168698 .. 4168717 - -10.6  -5.43414   AGCAGACACAAAAAA            GGCCGCGG TATG CAGCGGCC             AAGGAAGGATCCGGT 100 52
    AHA_3734 4166964 .. 4166975 -  -5.8  -4.58395   CTCACCCCGCAAAAA                CACC TGGC GGTG                 GCGCTGGCACTGGCC  76 520
    AHA_3733 4165899 .. 4165924 - -16.9  -2.75064   CGCTCTAGCCAACGA         GGGTCACCCCA GCAG TGGGGCGACCC          TTTGTTGCAGATGGG  90 3
    AHA_3731 4163941 .. 4163967 -  -9.5  -3.18467   AAAGCCTGAACCCAA         GTGGCCTGA GCCTTGCCG TCAGGCCAC         TCCATCTCTCGGCCC  68 83
        znuA 4161279 .. 4161291 -  -3.4  -3.50572   AGCCATTTCATACAA                GACA CTCCC TGTC                AGATGCTGGAAGTCA  49 94
    AHA_3726 4160526 .. 4160564 - -13.9  -4.68384   AGGCACGCAATAAAA  CCG-GCCCGG-TGCTGAGC ATC GACCAGCATCCGGGCGCGG  CCAAATATTTCGAGG 100 61
    AHA_3724 4156728 .. 4156750 - -20.6  -5.11063   ATCAGCCAATAAAAA           GGCCCCGCCA GAG TGGCGGGGCC           TTTTTGTTTCGGCGA 100 49
    AHA_3722 4154976 .. 4154991 - -10.4  -5.60993   GCGGGCATAAAAAAA              GCTCCC AATC GGGAGC               TTTTTTTATGGGCCG 100 53
    AHA_3720 NONE
    AHA_3719 4152127 .. 4152146 - -13.6  -4.75372   ATCAGCCATGAAAAA            GGGGAACC GCGA GGTTCCCC             TTTTGTTTGGCTGCT 100 71
    AHA_3717 4148783 .. 4148799 -  -2.2  -3.26545   TTCATACAGTATCAA              GCCCAA TTTAT CTGAGC              AGGGCCAACAAACCC  43 16
        recA 4147614 .. 4147633 -   -15  -4.18213   AACCATAAATAACAA            GGCCGGGT ATCA ACCCGGCC             TTCCTTTGTTCCTTA 100 38
        recX 4146834 .. 4146848 -  -3.5  -4.14243   GATGGCAGCGGAAAA               TCGGC TTGTC ACCGA               GGAGCCTCCCACCGC  60 281
        alaS NONE
    AHA_3713 4142761 .. 4142775 -  -2.8  -4.06055   ATGGTTGAAACTAAA               TCAATC AGG GATTGT               TTCCCAAGGGCTGCT  56 15
        csrA 4142440 .. 4142460 - -12.6  -5.26119   CCCGGAAAAACAAAA            GGCGACAC ATGAG GTGTCGCC            TTGTCACAGCCATTA 100 48
    AHA_3711 NONE
    AHA_3710 4142020 .. 4142037 -  -8.5  -5.68039   AAAGCGATAAAAAAA             GCTTACT CAAC AGTAAGC              CTTTTTCAGGTGTAC 100 84
    AHA_3709 NONE
    AHA_3708 NONE
    AHA_3707 NONE
    AHA_3706 4141574 .. 4141597 - -14.6  -5.71712   GGCCATATAAAAAAA          CAGCCCCGAC CGAG GTCGAGGCTG           TCTTCTATATGGTGC 100 35
    AHA_3699 4131719 .. 4131735 -  -4.3   -3.2032   GGGCGACATCAAAAT              GACCCGG TCG CCATGTC              TATCGAGAATGCCAA  49 70
    AHA_3698 4130435 .. 4130453 -   -16  -4.30014   GGCAGCAACGGAAAA             GGGCACCC CGA GGGTGCCC             TTTTTGCTGGCCGAT 100 140
    AHA_3696 4129621 .. 4129650 - -18.1  -4.98616   GGAAAAGAGGAAAAA       CAAAAGGCCATCA TTGC TGATGGCCTTTTG        TTTTTGAATTTGATG 100 39
         amt 4127728 .. 4127748 - -19.7  -5.36441   GGCGGACATAAAAAA            GCCGCCGGC ATG GCCGGCGGC            AATATTGCTGACTAA 100 52
      rumA-2 4125974 .. 4125991 - -11.3  -5.65177   ACAGGTATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 122
    AHA_3692 4124190 .. 4124200 -  -5.4  -3.34962   GGTCACATTTTATAA                 GCAT GAA ATGC                 GCTAGGGGTCGTCAA  53 101
    AHA_3691 4122730 .. 4122764 - -14.3  -3.54424   TGTCACCGCCCCAAA     CGCGAACGCCACAGC TTCTC GCTGTGGCGTTCGTC     TTTACCCTGACAGTC  95 49
      deoC-2 4121297 .. 4121315 -   -16  -3.34398   GGTGGGGGCGAAACA             GGGCGGAC CAG GTCCGCCC             TCTCATCAACCTATT 100 39
        deoA NONE
        deoB NONE
        deoD 4117825 .. 4117844 - -16.4  -4.27316   CCTTGCAATGCAAAA            CGGCGGCC CGAG GGCCGCCG             TTGTCATTATTCATG 100 52
    AHA_3685 4113723 .. 4113736 -  -3.8  -2.62983   TCCATTTTGAGACTA               CGTC CTCCGT GACG                TGGGGGTCTTGCCGA  42 51
    AHA_3684 4112728 .. 4112754 - -23.8  -4.67982   GGGCAGGCAATAAAA         CCATGGCGGGCC TCT GGCCCGCCATGG         TTTGTTTATCCATCA 100 78
        radA 4108891 .. 4108908 - -12.7  -4.66609   TACCCGATGTAAAAA             GGAGCGC CATT GCGCTCC              TTTTTATTGCCTGCC 100 58
    AHA_3678 4107265 .. 4107280 - -11.8  -5.46657   GATGGCAATAAAAAA              CCCGGC TGGC GCCGGG               TTTTTGGGGATTACT 100 36
    AHA_3677 4106717 .. 4106739 - -17.8   -5.5112   TCGACCAATAAAAAA           CCGGCAACAC CCA GTGTTGCCGG           TTTTTTATTGTCTCT 100 50
         zur NONE
    AHA_3673 NONE
    AHA_3672 4104217 .. 4104244 -   -20  -2.77899   CCGGGCGACCAACGA        CAAGAGGCCAGC ATTA GCTGGCCTCTTG         CATTGCATCTGTCAC 100 49
    AHA_3668 4098927 .. 4098952 - -17.7  -2.71268   GGGCAGCAGATAGCA         CAACGGCCATC CGGA GATGGCCGTTG          TGGCGGGCAGGCTTA  95 38
    AHA_3664 4095037 .. 4095069 -  -3.4   -5.0538   TGTTACCTGAAAAAA     GCACTGCCC--GATGC ATC GCATCCCGGGCCTTGC     TCATGAATAGTCGCG  76 26
        proC NONE
    AHA_3662 NONE
    AHA_3661 NONE
    AHA_3660 4092809 .. 4092830 - -15.9  -5.14563   GCCGTCATGAAAAAA           GCCCCGAAC CTGC GTTCGGGGC            TTTTTCTGGGCATGA 100 53
    AHA_3657 4089848 .. 4089869 - -18.7   -3.2396   AACCATCATGACGAA           GCGGGGGGC ATTG GCCCCCCGC            AGTTGTTTTGATAGC 100 51
    AHA_3655 4088317 .. 4088332 -  -5.4  -4.15453   GAAGGCACTGCAAAA              GAGCAA GGCG CTGCTC               AAGCAGGAGCTCAGG  65 152
    AHA_3653 4087156 .. 4087169 -  -3.1  -3.63817   CACAGTGTAAAAAAC               TGAAC AAGC GTCCA                TTAATGTCAGTGCTG  51 32
    AHA_3652 4086457 .. 4086471 -  -3.5  -3.50853   TTGCCGGAATTAGAA               GGTGA ATTCG CCACC               GATGAACCAGCCGTC  51 5
    AHA_3651 4085649 .. 4085666 - -14.1  -5.24531   AGCCCCCATAAAAAA             GCGCGCC ATTT GGCGCGC              TTTTTGTTTTCTGCC 100 68
        ruvA NONE
        ruvB 4079843 .. 4079855 - -10.5  -5.55769   CCGGATAACAAAAAA                CCGCC TCT GGCGG                CGGTTTTTTGTTCAA 100 51
        cydA NONE
      cydB-2 NONE
    AHA_3644 NONE
    AHA_3643 4075772 .. 4075806 - -15.7  -4.08853   CTGAATAGGAAAGAA     GCAGGGGGAAGCAGG GAAAT CCTGCCTCCCCCCGT     TTTTTATGAAAGGAA 100 29
    AHA_3642 NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal 4070957 .. 4070974 - -11.3  -4.88918   TTAGTGCAAATAAAA             CGGCCAT CGAA ATGGCCG              CTTGCATATAAACGA 100 60
    AHA_3636 4070017 .. 4070031 -  -4.3  -3.24924   GCTGTATTTACAAGA               CTGTT ACGAA AACAG               TGACATGCAGCAATG  49 41
    AHA_3635 NONE
    AHA_3634 4069679 .. 4069691 -  -6.3  -3.53012   GCTTGCCTTGGCAAA                CAGTT TAA AACTG                GTGGTCGCTACTGGG  57 24
    AHA_3633 NONE
    AHA_3632 NONE
    AHA_3631 NONE
    AHA_3630 NONE
    AHA_3629 NONE
    AHA_3628 NONE
    AHA_3627 NONE
    AHA_3626 NONE
    AHA_3625 NONE
    AHA_3624 NONE
    AHA_3623 NONE
    AHA_3622 4068484 .. 4068501 - -12.7  -5.93809   CGGCCATAAAAAAAA             GCCCGCA TTGC TGCGGGC              TTTTTCAATCTGGTG 100 36
        nadA 4065097 .. 4065118 - -15.9  -4.68132   GAACAGATAAATAAA           GAGGGCTCC CGCG GGAGCCCTC            TTTGCATCTCTTTGT 100 49
        malQ NONE
        glgB NONE
      glgX-2 NONE
        msrB 4055656 .. 4055681 - -21.9  -4.55295   GCGGCCACAAAGAAA         CGGCCCCCTGC CAAG GCAGGGGGCCG          TTTTTGCATGGATGC 100 53
    AHA_3609 4051603 .. 4051618 -    -6  -3.05596   GATGGGCCGACTCAA              CGCCCC AGCT GGGCCG               AGATGCGATCGCAGA  52 6
    AHA_3608 4051293 .. 4051308 - -11.8  -5.42259   GGATCGCGAAAAAAA              CCGGCC AGTC GGCCGG               TTGTGTCATTTTATG 100 55
    AHA_3607 4050822 .. 4050848 -   -21  -4.41548   CCAGACCGGATAAAA         GAAGAGGAGGCC ACT GGCCTCCTCTTC         TTTTATCTGTAGTCA 100 52
    AHA_3604 4047738 .. 4047749 -  -2.2  -4.09739   GCAACGGCCTGAAAA                CGAC TCAT GTCA                 CCGCCAACATGTCGA  56 248
    AHA_3603 4046807 .. 4046823 - -10.8  -5.72622   CTGACAAACAAAAAA              GGGGCC GACAT GGCCCC              TTTTTGTTTCTGTGT 100 50
    AHA_3601 4045134 .. 4045153 - -13.6  -5.47159   GCCAACAAATAAAAA            CCGGAGCA ATTT TGCTCCGG             TTTTACAGGGTGGTG 100 56
    AHA_3600 4043607 .. 4043617 -  -6.8  -3.35679   GGCGGCCATCGACAA                 GGTC AGA GACC                 GGCACCAGCAGGCGC  55 64
    AHA_3598 4041150 .. 4041167 -  -8.3  -2.71144   CACGCCCCCCAACTA             GGCCCGG TCAG CCGGGCG              AGGTTACAGCAGCCC  57 29
    AHA_3595 4038929 .. 4038940 -  -5.8  -2.72043   AAGCTGCCGGTAAAG                GAGC TCTG GCTC                 GCCTACCGGGTAGAG  50 496
    AHA_3591 4033195 .. 4033208 -  -9.5   -5.4505   CCCGTGAATAAAAAA               GGCCC CGCA GGGCC                AACAAGACAGCCGGT 100 64
    AHA_3590 4032289 .. 4032313 -    -5  -3.17075   TGGTCGTCAAGCCAA         CGCC-AGGC TCACCGCC GCCTCGGCG          TGGATCGCCATGGTT  52 122
    AHA_3589 4030480 .. 4030496 -  -9.4  -4.40298   AGTGAAATGAACAAA              TGGCCC CGTTC GGGCCA              TTCTTTTTTACTCTT  85 33
    AHA_3588 4029184 .. 4029201 - -12.7   -4.7173   GACCAGACGCAAAAA             CGGGAGC ATCT GCTCCCG              TTTTTTTCGCATCAC 100 61
    AHA_3587 4028412 .. 4028425 -  -8.1  -2.79671   ATGTTAAGTGCAAAT               CCGGA TGAT TCCGG                GCACTCGTCTCAGCC  57 56
      ackA-2 4027035 .. 4027066 - -20.2  -3.86015   CACGGCCGCCACAAA      CGACAACGCCCGGC AGGG GCCGGGCGTTGTCT       GGGAGCGAGGGGGCG 100 41
    AHA_3585 NONE
    AHA_3584 4024554 .. 4024574 - -18.3  -5.78622   CGACCGCAAAAAAAA            GCCCCGACC AGA GGTCGGGGC            CATGTTGGCAAGCAC 100 44
        putP 4022746 .. 4022762 - -15.1  -5.03314   TGTACTGGCAAAAAA              GCCCCGC ATC GCGGGGC              TTTTTGTTATCTGCA 100 50
    AHA_3582 4021349 .. 4021368 - -13.6  -4.77567   ACCGGCATAAGAAAA            CCGGAACC CAAG GGTTCCGG             TTTTTTCATCAAGGC 100 34
    AHA_3577 4016744 .. 4016758 - -12.8  -5.64421   ACGCCAAATAAAAAA               GCCCCG TCA CGGGGC               TTTTTCCATGCCAGC 100 46
    AHA_3575 4014684 .. 4014718 -  -3.5  -4.61231   CGATACCCTGAAAAA    GGCGCAAAAACGCTGG GCCA CCGGCATCTATGC-CC     TCTGGTATCCCATTC  69 351
    AHA_3571 4011169 .. 4011184 - -10.4  -4.05714   ACCGCCAACGACAAA              GGGCTC CTCG GAGCCC               TTTTCGCTGTCTTGC  83 58
    AHA_3568 4008130 .. 4008141 -  -4.4  -2.74144   GCCGCACCGTCAAAT                CGAT GGAT ATCG                 CCGCCAGCGCTCAGG  45 36
    AHA_3567 NONE
        cysN NONE
    AHA_3565 4003849 .. 4003871 -  -4.9  -2.76261   CCTCAATGCTGAAAC          GGTCTG-GCTC CTT GAGCTCAG-CC          TCTGGCCACTCGCCA  45 108
        cysC 4003157 .. 4003181 - -15.7  -3.73097   AGAACGCAATAAATA          GGAGGGGGGAA ATG CCCCCCCCTCC          CTTATATCACTGCTC 100 58
    AHA_3551 3990856 .. 3990871 - -11.8  -4.56775   ATCTCTCGTGAAAAA              GGCGCC TCAA GGCGCC               TTTTTTATGGGTTGT 100 16
         mpl NONE
    AHA_3548 3988094 .. 3988123 - -19.3  -4.64861   CTCCGTCAAAATAAA       GCGGCGCCGAACT GTTC AGGTCGGCGCCGC        TTTTGTTTGTCCACT 100 51
         hpt 3986659 .. 3986674 - -11.8  -4.60797   TCTCGAGACAGAAAA              GGCGGC CAAG GCCGCC               TGCAGACAGAAAATG 100 80
    AHA_3545 NONE
    AHA_3544 3984900 .. 3984919 -   -15  -5.41143   GAGGCGGCAAAAAAA            CGGGCACC CCAG GGTGCCCG             TTGCATTGCATCAGT 100 36
    AHA_3543 NONE
    AHA_3542 3982557 .. 3982593 - -10.8  -4.93365   CGTCACAACGAAAAA    CGGCAGCAGTTTCGCC GCGCT GGCACCACTGCTGCCA    CTCCTCGGGCGGGCA 100 184
    AHA_3541 NONE
    AHA_3540 3981436 .. 3981459 - -16.8  -3.35996   CAGCGCCACTGACAA          CAAAGCCCGC ATGT GCGGGCTTTG           TTGTTTCTGAGCGTG 100 47
        hrpB NONE
        mrcB 3969117 .. 3969127 -  -2.4  -2.63596   GGGGATGTGACATGA                 GCAC TCC GGGC                 AAGCGGGCAGCCTGA  38 55
    AHA_3529 3968645 .. 3968672 - -22.8  -3.40403   TGCTCGCCATGACAA        GAAGCCGCCCGG CTAA CCGGGCGGCTTC         TTTTCTTTATGGGGC 100 66
    AHA_3526 3966731 .. 3966755 -  -2.8  -2.64735   AGGGTACTGACAGTA          TGTACCATCA GGCAG TGATGGATCA          CAAGCCCCTGCACTT  40 73
    AHA_3525 3965066 .. 3965094 - -21.9  -3.57792   GCAGGCAGCCGGAAA        CAACAAAGGGGCC AGT GGCCCCTTTGTTG        TTTCCGGTCGGTGTC 100 39
    AHA_3523 3963579 .. 3963602 - -13.2   -4.7078   GGAAGTAGCCAAAAA          GAAGGCCGGT ATGC ACCGACCTTC           TTTTTTATTGCTGAC 100 30
    AHA_3522 3962060 .. 3962096 -    -5  -2.74192   CATTCTGGAAGAGGA    GGTGCTGCTGCATAAG GACAT CTTTCGCCACAGCGCC    ATTCGCCGCACCATT  44 377
    AHA_3519 NONE
    AHA_3518 NONE
    AHA_3517 3957193 .. 3957208 - -11.8  -4.73108   GGGACAAAACGAAAA              GGGCCC CTTG GGGCCC               TTCGATATCACGCGG 100 53
        rrsG 3955122 .. 3955143 -  -8.7  -3.05069   TTCACCAAACAAGCA           CTGACACGC CAAG GCGCATCAG            GTCTTTGCTCTAACT  63 90
    AHA_3515 3954881 .. 3954908 - -14.4  -4.65747   CAAGGCTGAAGAAAA        CAGAGTTAAGAA TCAG TTCTTAACTCTG         CATTCTTGTTAGCAA 100 50
        rrlG NONE
        rrfG 3951540 .. 3951559 -   -15   -5.4833   TCAGGCAATAAAAAA            CCCCGCTC AGAT GAGCGGGG             TTTCTCGTGTTGGGT 100 40
    AHA_3512 3950580 .. 3950605 - -17.7  -3.27022   TGCAGTGCAGACGAA         GGCGTATCCCA GTGA TGGGATACGCC          TTTTTCTATGCCCTC 100 39
    AHA_3509 3947509 .. 3947519 -  -2.4  -3.54543   ATTCACCTCGGCAAA                 CGGG CGA CCCT                 TGGCGGTCGAAACAG  47 71
    AHA_3508 NONE
    AHA_3507 NONE
    AHA_3506 3943979 .. 3944000 - -15.9   -4.9792   CAGCGCATACAAAAA           CGGTCAGCC CAAG GGCTGACCG            TTTTTCGCTTTACCG 100 76
    AHA_3502 3941378 .. 3941391 -  -2.3  -4.41616   ACTGCTTGAAATAAA               GCAGC TAAC GATGC                TCATCGAAACTCAGC  62 194
    AHA_3501 3940211 .. 3940240 - -22.3  -3.14931   CGGATTGTCTAGCAA       CAAAGAGGGCGCC CATG GGCGCCCTCTTTG        TATGTGGCCGTCTGA 100 48
      cysQ-2 3936259 .. 3936289 - -22.7  -6.04953   AGAGAAATAAAAAAA       GGCCGGACTGGCA GTTCA TGCCAGTCCGGCC       TTTTTCTATCCCGAT 100 49
    AHA_3493 NONE
    AHA_3492 3931047 .. 3931071 -  -4.3  -3.52451   AAAATAAAATCAAGA          TGATCAATGTG TTG CACTTTGATGA          CGGGAGCACTGCCAG  52 63
    AHA_3491 3915695 .. 3915714 - -13.6  -5.74122   CATGACATAAAAAAA            GCGGCAGA TGAA TCTGCCGC             TTTTTGCCTGGGGTC 100 48
    AHA_3490 3914464 .. 3914479 - -10.4  -5.10208   CAACCCCAATAAAAA              TCCCGC CAAG GCGGGA               TGTTTATTGCTCCTG 100 43
    AHA_3488 NONE
    AHA_3487 3910570 .. 3910616 - -22.4  -3.09516   CGGCTCATCAGCCAA CCGGATGACAATCAGCCCGGCC AAT GGCCGGGCTGATTGTCATTGTG CCTTGCGGCATCCGC 100 55
    AHA_3485 3907769 .. 3907788 - -13.6  -5.40072   TCGGGGCGAAAAAAA            CCAGCGAC CTCG GTCGCTGG             TTTTTTTATGCGCGC 100 49
        trmB NONE
    AHA_3481 3903830 .. 3903846 - -13.7  -4.88736   CACCACCGACAAAAA              TCCCGCC AGC GGCGGGA              CTTGTCTATCTGCTG 100 86
    AHA_3480 3902870 .. 3902881 -  -2.2  -5.11033   GACAAGGTTAAAAAA                TGGA GCGG CCCA                 GACGCTCGGCCAGCA  74 6
    AHA_3479 3901501 .. 3901520 - -10.6  -4.83615   GAGCGGGTACAAAAA            GGCCGGAC ATGG GGCCGGCC             TGTTTTGCGATCTGT 100 46
    AHA_3478 3900197 .. 3900231 -  -9.3  -2.91274   CCTAGTTCAACCAGA    TGAGCCCGTTTGCCGC CATT GCTGCAA-CGGGATCA     ACGTCAACAATCAGC  62 40
    AHA_3477 3899880 .. 3899905 - -19.1  -3.08508   GAGGGCTGAAAATGA         CAAGGGCTGCC CACG GGCAGCCCTTG          TTGCTTGAGGAGGGC 100 42
    AHA_3474 3894536 .. 3894554 -   -16  -4.24404   AGCCAAATTTGAAAA             GCCCGCTC ATC GAGCGGGC             TTTTTTCATTTCGGT 100 40
    AHA_3470 3891079 .. 3891108 - -20.9  -3.21912   GCTGTAAGCCAGCAA       CAACAAGGCCACC CGAG GGTGGCCTTGTTG        TTTTTGCAACGCGTG 100 56
    AHA_3468 3888388 .. 3888407 - -13.6  -5.38054   GCCCACAAACAAAAA            CCCCGTTG CAGG CAACGGGG             TTTTTGCTGGCACTC 100 49
    AHA_3466 NONE
    AHA_3465 3886357 .. 3886378 - -17.3  -5.24129   GCGCCCCATAAAAAA           GCCGCACCC GAGA GGGTGCGGC            AAACGGCAGGCAGGG 100 45
         orn NONE
    AHA_3458 NONE
    AHA_3457 NONE
    AHA_3456 3882310 .. 3882331 -    -3  -2.56596   TGCTCTACCAACTGA           GCTATTCC CGCATC GGAATATC            ACTTACAAATTTTTG  40 39
    AHA_3455 NONE
    AHA_3454 NONE
    AHA_3453 NONE
    AHA_3452 NONE
    AHA_3451 3881470 .. 3881486 -    -3  -4.66833   GCTGAAGGTCAAAAA             GTC-CAG TTCA CTGTGAC              CCAGGGCAAAAAAGG  69 341
        gltX 3876463 .. 3876482 - -12.8  -4.85782   TTGGCCAAAAACAAA            GGGCCCCC GTAC GGGAGCCC             TTTCTCAAGCACTGG 100 48
    AHA_3446 NONE
    AHA_3445 3876022 .. 3876035 -  -2.3  -2.61582   CAGCTGAGCTATAAC               CCCAC AAAG GTCGG                CCTGGGTGATACACA  38 78
    AHA_3444 3875916 .. 3875938 -  -3.5  -3.06312   AAATTCGGCACTGAA           TGAATGG TTCTGGCGG CCATTCA           TCCTAAATAATGGTG  45 36
    AHA_3443 NONE
    AHA_3442 3875671 .. 3875691 - -18.3  -5.46706   AGCGCAAAACAAAAA            GGCCACCGC AGT GCGGTGGCC            TTTTCTACTTTCATT 100 49
    AHA_3440 3869672 .. 3869691 - -13.6  -5.60993   CCCGCCATAAAAAAA            TCCGGAGC CTGG GCTCCGGA             TTGGGTCATTGCCTT 100 236
    AHA_3432 NONE
    AHA_3431 3858936 .. 3858960 -  -7.8  -3.16742   TTCAAGGGTGAGCAA          CCCGGGGC CATAAGCCC GCCCCAGG          TCACTGATAACGGGT  59 26
    AHA_3430 NONE
    AHA_3429 NONE
    AHA_3428 3854925 .. 3854942 - -12.7  -3.20227   CTCCAACCATGAAGA             TGGGGCC CGCA GGCCCCA              TTTTTTATTCGCTGT  83 77
    AHA_3425 3852300 .. 3852336 -  -2.3  -5.74122   CAGCAGATAAAAAAA   TAGCAGG-G-GGGAGGA TGGAT TCCTCACTCGCCTGCTG   TTTTCGATCTGCCTG  87 63
         gpt 3851430 .. 3851452 - -14.9  -5.67063   TGCACCACAAAAAAA           CAGGGCTCC ATATA GGAGCCCTG           TGAAGCTGATTCGCT 100 43
        frsA 3850046 .. 3850060 -  -4.2   -2.6563   CTGTTGAACAAGCCA               CATCAC CCT GGGATG               ACGTTATATTTTAGC  44 47
         crl 3849587 .. 3849619 - -23.5  -4.53349   CAAGCAGCAAAGAAA      CGCCCCGCCAGCC GATGGGT GGCTGGCGGGGCG      GCGGGTCATCAGGCG 100 34
        proB NONE
        proA 3846976 .. 3846993 - -11.3  -5.88061   AAAAAAGCAAAAAAA             TGCCGAC CTGA GTCGGCA              TATTCACAGAGGACC 100 50
    AHA_3419 3846185 .. 3846202 - -12.7  -4.15006   AGACTCACTGCAAAA             GGCCAGC ATTC GCTGGCC              TTTTTATTTGGGTTC  95 52
    AHA_3417 3844731 .. 3844743 -  -7.7  -2.71731   CCGACTGGCCAAGCA                GTTGC GCA GCAAC                TCGGCAAGCTGACAG  55 83
    AHA_3414 3841049 .. 3841062 -  -2.3  -2.67515   CCGAGCAGCACATGA               GCCTT GATC ACGGC                CTCGCAGTAAGATCG  38 52
        cobA 3840154 .. 3840180 -  -6.4  -4.24204   GAGGTAGAGGGAAAA         CGGCGGCTCAGG CCA CCCGATCCAGCG         CCTGTCCCAGCAGGC  71 6
    AHA_3412 3839258 .. 3839271 -  -5.9  -2.71144   TATGCGCCTCAATGA               GGCGC CGTT GCACC                AAAACGGTTTGCCAG  50 191
    AHA_3411 NONE
    AHA_3410 3836687 .. 3836697 -  -6.8  -2.51173   ATGAATGTGATTAAC                 GCAG CAC CTGC                 CGCTTGTCCCAGGAC  51 10
    AHA_3409 3835824 .. 3835837 -  -3.7  -2.52464   TCTTCCTTGAATCGA               TGGGC TCAG GCCCG                GCGCTGACTGCGAAC  42 17
      nirB-1 NONE
    AHA_3407 3832609 .. 3832629 - -13.3  -5.24129   CTTGCGCACAAAAAA            TCACCGGGC AAA ACCCGGTGA            CAGGAAAACGGTTTT 100 54
    AHA_3406 NONE
    AHA_3405 3830478 .. 3830495 - -12.7  -4.88228   AGCCAACATGAAAAA             GAGGGCC CGTG GGCCCTC              TTTTTTTCATTCACC 100 49
    AHA_3403 3828255 .. 3828273 -   -16  -4.76041   GATAGGCATGAAAAA             GCGGAGCC GGT GGCTCCGC             TGCAATCATCACTCC 100 44
    AHA_3402 3827245 .. 3827274 - -19.5  -3.80114   GATGAACTGAGCAAA       TGAAAACAGGGGC CGCG GCCCCTGTTTTCA        TGGTGCTCATGACCG 100 44
    AHA_3398 NONE
    AHA_3397 NONE
    AHA_3396 NONE
    AHA_3395 NONE
    AHA_3394 NONE
    AHA_3393 NONE
    AHA_3392 NONE
    AHA_3391 NONE
    AHA_3390 3817667 .. 3817679 -  -3.3  -3.13403   CTTGTCTCATCAATA                GTGAC CTT GTCTC                AGTTCCGGTTCGGCC  43 24
    AHA_3389 NONE
    AHA_3388 3816563 .. 3816576 -  -3.8  -3.14931   TTCAGCTTGCAGCAA               GAGG GGCTCT CCTC                GTCCCGGCGGGGGCG  45 62
    AHA_3387 NONE
    AHA_3386 NONE
    AHA_3385 NONE
    AHA_3384 3812003 .. 3812015 -  -4.1  -2.69977   ATACGCTAGAGATCA                TGAAG CTT CCTCA                GGCTAACAAATCGGA  42 23
        fabG NONE
    AHA_3382 3810014 .. 3810060 - -10.1  -3.67976   TTCATCAAGGCTAAA CCCAGCCTGTACCGGCGCCCTGC CAG GCAGGGCACCGACACT--CAGGG CCAGCGTTTGAAGAT  74 20
    AHA_3380 3808068 .. 3808099 -    -3  -3.66286   ATATTAGCCTAACAA      TCGGCGCCATACAT CTAC ACATATCACGCCAA       TAACCAAACTCAAAT  51 176
    AHA_3379 NONE
    AHA_3378 NONE
        folA 3806182 .. 3806206 - -20.1  -5.20333   TACGGACAACAAAAA          GGCCCCTTGTG CAG CACAAGGGGCC          TTTTATCTGCCAGAG 100 56
    AHA_3376 NONE
    AHA_3375 NONE
        proX 3802336 .. 3802355 - -16.4  -5.24129   GGCGCCCATAAAAAA            CGCCCGGC AACA GCCGGGCG             TTTTTCTTTGCGCAA 100 63
    AHA_3370 3796923 .. 3796942 - -16.4  -4.42238   CCATGGCAATCAAAA            CGCCCCGC AATT GCGGGGCG             TTTTTTATGGCAGGC 100 83
    AHA_3367 3792025 .. 3792050 - -16.9  -5.38958   ACGCATAAACAAAAA         GCCCCGCACTC GGCA GAGTACGGGGC          TTTGTCATGGCGGCC 100 62
        ansA 3789125 .. 3789155 - -22.8  -4.63542   CATAATTGGTAAAAA       CAAGAAGGGAGCCA TGA TGGCTCCCTTCTTG       TTTATCCATACCTCA 100 49
    AHA_3364 3786790 .. 3786802 -  -3.3  -2.82193   AGTAGACCGAGCATA                GCGCG TCT CACAC                CCAAAGATTGGCGTT  41 20
    AHA_3363 3785072 .. 3785096 - -20.1  -2.85351   CGCGGCCACAGCAGA          GAGGGGAGCCA ATA TGGCTCCCCTC          CTATCTATCATGCTT 100 59
    AHA_3360 NONE
    AHA_3359 3781651 .. 3781686 - -16.4  -3.80573   CTGAGCAGCAGCAAA    CGCAAAAAAAACCGCC TTGG GGCGGTTTTTTTTACA     TCTGCCTCAAGGGGT 100 46
    AHA_3357 3777424 .. 3777440 - -12.3  -4.76075   ACCAGATGAAGAAAA              CCCCTGA GCA TCAGGGG              TTTGTCGCAATACAT 100 54
    AHA_3356 3776776 .. 3776793 - -11.3  -5.73978   ACCAGAAACAAAAAA             GCCCTGA CGAG TCAGGGC              TTTGCCGGTCATGAA 100 46
    AHA_3351 3770937 .. 3770980 -   -11  -2.73681   GATCCAGCTCAACGA CCATCA-GCTGGTGCTGGTGC TGG GCCCCAACGCCAGCCTGATCG AGGGGCAGATCCGCA  63 117
    AHA_3343 3762477 .. 3762493 -  -8.7  -3.96148   CTGCCCGATGACAAA              CACAGCC GGG AGCTGTG              CCGCACCATCATCAA  71 262
        glyA 3754576 .. 3754599 - -15.4  -5.63504   AACGCCACAAAAAAA          CAATGCCACC CGTG GGTGGCATTG           GTCTCAAACCGGGTG 100 51
    AHA_3335 3753952 .. 3753963 -  -7.2  -4.18018   GGCGTTGACGGAAAA                GGGC GCCG GCCC                 CGGGGGCTGGCTCTA  74 123
        nrdR NONE
        ribD 3752275 .. 3752287 -  -3.3   -3.0386   AACATTGATAAATCA                GGCCA GTC TGGCG                GTAATGCGGATATCC  43 10
      ribE-3 3751536 .. 3751549 -  -3.9  -2.78384   CGGCGCGGGATCACA               GAAAA GCGT TTTTC                CCGCCGAGGGGCCGT  43 40
    AHA_3331 3750260 .. 3750285 - -16.3  -4.21812   GCTGAGGCAAAACAA         CAAGGGATGAC CGAG GTCATCCCTTG          CTTCATATTCATTTC 100 53
      ribE-2 NONE
        nusB 3747904 .. 3747920 -  -9.4  -4.84527   CCCATACAGTAAAAA              GCCAGC AATAA GCTGGC              TCCTCTCTTAGATGC 100 59
        thiL NONE
    AHA_3326 3746405 .. 3746430 -  -9.7  -3.11329   AAACAGAGATATATA         GGGGGA-TGCCA GCA TGGCGCTCCCCC         TTGCTGTCACCCTCA  67 38
    AHA_3325 3744187 .. 3744202 -  -8.2  -2.82623   TTTTTTTGACAAGCA              GAGCGG CGGG CCGCCC               CTTTCCTAGCTTGCG  57 31
    AHA_3324 NONE
    AHA_3323 NONE
    AHA_3322 3740510 .. 3740528 - -13.1  -4.41353   GCACACACAGTAAAA             GGGCGCC GTTAT GGCGCCC             TTTTTGTTTGTCTCG 100 59
    AHA_3318 NONE
        motB 3735447 .. 3735473 - -16.6  -3.95435   TGCTTGAAAAGAGAA         GCTGCGGCTATC AGA GAGAGCCGCAGC         TGTCGGTTCGGATGA 100 123
    AHA_3316 3734900 .. 3734921 - -15.9  -4.32857   CCCGCTAAATACAAA           CAGGGGAGC CGGG GCTCCCCTG            TTCTGGCATCAAGCT 100 44
        rrmJ NONE
        hflB 3731141 .. 3731159 - -13.1  -5.42975   TGACATAAAGAAAAA             CCCCGGG GCCAG CCCGGGG             TTTGTATCATCACGA 100 42
        folP NONE
        glmM 3728886 .. 3728905 -   -15  -2.96369   AACAAGATACAACCA            GGGCGGCT TAAA AGCCGCCC             TTTTTGTTCATTAAA  86 36
      tpiA-2 NONE
        secG NONE
    AHA_3307 3727574 .. 3727587 -  -9.5  -3.17325   ACTGGCTATAATACA               CCCGG TTAC CCGGG                CTCACTGCTTAATTG  68 39
    AHA_3306 3727344 .. 3727364 - -12.6  -5.24796   TGCACATAACAAAAA            GCCCCGAT GTCAA ATCGGGGC            TTGGCGCTTTACCCT 100 93
    AHA_3305 NONE
        nusA NONE
        infB 3722539 .. 3722554 - -11.8   -4.3739   TATCCTGCGATAAAA              GGGGGC CGCG GCCCCC               TATTTAATCTGACTC  93 46
        rbfA NONE
    AHA_3301 3721056 .. 3721086 -  -6.1  -3.40522   AGGGCGGTATCATAA       TCGTCCCCGTCAC TTTTC GCAACGGGAAAGA       GCCACAACGGCCAAC  56 63
        rpsO 3720666 .. 3720685 - -13.6  -5.45652   ACGCGCAATAAAAAA            GGGGAACC CGGA GGTTCCCC             TTTTTCGCGAAATCT 100 50
    AHA_3299 3718367 .. 3718384 - -12.7  -5.90231   ACAAATATAAAAAAA             GCCGACC CTGA GGTCGGC              TTTTTCACGGCTCGG 100 45
    AHA_3298 3717044 .. 3717055 -  -4.4  -3.50853   GCTGGTCAACCAGAA                CAGT ACCC ACTG                 AGGTTCAATCCTGCC  52 30
    AHA_3295 3714895 .. 3714916 - -11.6  -5.40625   ACATGAGATAAAAAA           GAAGCCGG GCTGCG CCGGCTTC            TTTTTTCATCAATGA 100 42
    AHA_3287 NONE
    AHA_3286 NONE
    AHA_3285 3699948 .. 3699965 - -14.1  -3.51478   AGAGCAGATAAGCAA             CGGGGCC CGCA GGCCCCG              TTTTCATTGGATCGT  95 40
    AHA_3283 3697578 .. 3697593 -    -6  -3.54459   GCAATGGTGTGCAAA              GCGCGC CTAA GCGCTC               CCCAGATAGTCGAGG  57 16
    AHA_3282 NONE
    AHA_3281 NONE
    AHA_3280 3693770 .. 3693782 -  -6.2  -4.72272   TTTTTGCATGAAAAA                GCGC ATCCG GCGC                CGCTGACGCCGCCTC  78 128
    AHA_3279 3692630 .. 3692655 - -19.1  -4.07133   CAGTGCCAGAAACAA         CAACGGCGACC TCAT GGTCGCCGTTG          TGCATTAGCCAGTCT 100 50
        xerD 3686917 .. 3686937 -  -3.1  -4.70659   GCCGAGAGCGAAAAA            GCCCAGCGC GAT GCCCTGACC            GGGCTCTACAACCGC  73 466
        dsbC NONE
        recJ NONE
    AHA_3269 NONE
    AHA_3268 3680656 .. 3680697 -  -2.2  -2.95938   TAAAAACCACAATGA GCGCAAGGAACACCAT CTTTACCCTC ACGGAGCCCCTCACGC  CTGCACAAAGGCCGG  40 20
    AHA_3267 3679924 .. 3679955 -  -4.2  -3.28712   CGGGTCGGCTCACAA      CGTGTACG-GGGCGG GAG CCGCCTTCGCGCCCG      CCGGCGGGCAGGCAT  49 133
      nqrE-2 3679274 .. 3679291 - -12.7  -4.19472   CAATAGATGGCAAAA             CGGCCAC TTGC GTGGCCG              TTGCAACACTCAGCC  95 43
    AHA_3246 3662038 .. 3662061 - -18.2  -3.02632   CAACCCGATAAATGA          GAGAGGCGCC CAAG GGCGCCTCTC           TTCTGTTCAGTCTGA 100 192
    AHA_3240 NONE
    AHA_3239 3654174 .. 3654203 -   -15  -4.08216   TCATGTTGCCCAAAA       TGGCTGCGGCCC GACAGG GGGCCGCAGACA        AAATGTCAAAACAGT 100 66
    AHA_3238 3653369 .. 3653383 -  -7.8  -2.71144   CACCTGCCGCAACCA               CCAGCA TAA TGCCGG               TGTTCCCTCCATGAC  55 125
    AHA_3237 3652281 .. 3652299 -  -8.8  -2.56164   GCCGCAACCAGCAAT             GCCGGATC GCT GATGCGGC             CGGTTCAGGGAGTCG  59 91
    AHA_3235 3651016 .. 3651033 -  -6.2  -3.40403   TGGCCCGCAGCACAA             GCCGGC TCATGC GCCGAC              TCCCGCGAGGCCTGG  56 14
    AHA_3234 3650347 .. 3650365 - -13.8  -3.09516   TCGTCCACCACCCAA             GCCCCCGC TCG ACGGGGGC             TTTTTGTTGTCAGGC  84 35
    AHA_3232 3647728 .. 3647763 -  -6.7   -3.5393   ACGATTCCCGCCAAA    GGGCGCCACTGTCGC AGGAGA GCGACACCGCCTCCC     GCGCCGCCTTCGATG  60 144
    AHA_3231 3647162 .. 3647185 - -18.2  -3.96216   CGCCGACCCAAACAA          GAGAGGGGCC TGTC GGCCCCTCTC           TCATTGCTGGCAGCG 100 42
    AHA_3224 3640571 .. 3640587 - -15.1  -5.32882   CATCACCATAAAAAA              CGGGGGC CAG GCCCCCG              TTTTTTATGTCGTTC 100 48
    AHA_3216 3633184 .. 3633194 -  -8.2  -3.24735   CAGGGAAACAGGCAA                 GCGG GCC CCGC                 CAATCAGGCCATCAG  62 76
    AHA_3215 NONE
    AHA_3214 3631028 .. 3631044 - -10.8  -5.61596   ACCGCCATAAAAAAA              CCGGGC GCCAG GCCCGG              TTGTTGATGCTGGTC 100 39
    AHA_3212 3629362 .. 3629378 - -10.8  -4.06904   TGACGCAATGACAAA              CCGGGC CAAGT GCCCGG              TTTTTTTATAGCTCC  83 131
    AHA_3204 3617871 .. 3617886 - -10.4   -5.0925   GCTCAAAACGAAAAA              GGCAGC CTAG GCTGCC               TTTTTGATGGCCGAA 100 51
    AHA_3201 3615099 .. 3615132 - -15.3  -3.84996   AAGAGACAATGCAAA     CATGCGAAAGGGGCC GGCA GGCCCCTTTCGCGCA      TATGTCACACCCATC 100 49
    AHA_3199 3613137 .. 3613154 - -14.1  -5.40474   ATTCGGCTAAAAAAA             CCGGGCC CTCG GGCCCGG              TAAAAAAACACAGGG 100 58
    AHA_3198 3612277 .. 3612300 -  -8.8  -3.12351   GGCGGCTAGACGCAA          GCCCGTGGCCT CAA ACGCC-CGGGC          TATCCCCATAGAGCA  63 196
    AHA_3197 3610553 .. 3610589 - -16.5  -4.39426   GACAGGCCGATAAAA    CAAGGCGGGCCCGGATC CAG GATCCGGGCCCGCAACA    GCGAGCATCCAACCC 100 44
    AHA_3196 3609495 .. 3609527 - -15.7  -3.24137   AATCACCGCAGAAGA      TAAAAAAACCGGCGC AAT GCGCCGGTTTTCTTT      TTTGTGGCCTTGTAG 100 54
        pilM NONE
        pilN NONE
        pilO NONE
    AHA_3191 NONE
        pilQ 3601646 .. 3601670 -  -2.1  -4.20368   TTATCTCAATAGAAA          TCAGGACTG GCAACCG CAGCCCTTA          CGCCCCAGCCTCATT  56 84
        aroK NONE
        aroB NONE
    AHA_3187 3598290 .. 3598308 -  -5.8   -5.1675   GCATCGACCAAAAAA             GGGGGACG ATT CTACCCCC             TTCCCGGCCAAAATG  90 42
    AHA_3186 3597358 .. 3597375 - -12.7  -5.43414   AGCAGACATAAAAAA             CGGCACC CCCA GGTGCCG              TCTGTGTCAGCCGAG 100 32
         rpe NONE
       gph-2 NONE
      trpS-2 3594570 .. 3594595 -  -6.1  -4.64861   GTCGGGTAAAACAAA         GAAAGCCAGGC AAAT ACCCAGCTCTC          TTCTACTACACCTTC  75 49
    AHA_3182 NONE
    AHA_3181 3593674 .. 3593688 -  -2.8  -3.41051   GGAGGCCGATCACAA               CTATTC AGG GATTAG               CCAAAAAATTGGCCA  47 15
        argD 3592136 .. 3592167 -  -5.6  -2.80816   CTTTCATTGACGACA      GGTGGGGTCCCGGC TCCT GCCGGGAGGGCTCC       CCACCTCAATTTGGA  47 41
        astA NONE
        astD 3589470 .. 3589488 -  -8.8  -3.58726   TGCGGGTACAGACAA             GGGCACCA GTT CAGTGCCC             CTTTTATTGTCGTGG  68 85
    AHA_3177 3588584 .. 3588602 - -11.7  -4.45544   TGCCACCAATGAAAA             CGCCTCC GCAAA GGAGGCG             TTTTGCATGCAGCAG  95 64
    AHA_3175 3586371 .. 3586394 - -18.2  -4.26202   AGACCCACCAACAAA          CAGGGCTCCC CATG GGGAGCCCTG           TTGCTATGTCGCCGT 100 48
    AHA_3166 3573073 .. 3573090 - -14.1  -5.06414   TGCGGGCAATAAAAA             GGCGGCC CGCA GGCCGCC              ATGTCGTTTGCTGTC 100 42
        hemA NONE
        prfA NONE
    AHA_3148 3561300 .. 3561316 -  -9.4  -4.15044   GTGTCCTTGAACAAA              GGCAGG TCCGG CCTGCC              CGTCATCATCACTGA  80 34
    AHA_3147 NONE
    AHA_3146 3559954 .. 3559991 - -11.3  -2.52676   CAGGGCTTGAATCCA   CATC-CGGCCGCGCTGCC CAA AGCAGCGCGACCTCGATA   CTCGTCTGTTGCATC  68 120
        kdsA 3558994 .. 3559044 - -19.3   -5.5454   CCAAAGAAATAAAAA CAGGCCGCAAACAAAAATGCCCCGC AGT GCGGGGCATTTTTATT-G-GGCCAG CGGGGCCTGACTCAG 100 37
    AHA_3144 3557370 .. 3557385 - -11.8  -4.77036   CGGTATCATGAAAAA              CGGCCC AAAC GGGCCG               TTTTTTTATGGCTTG 100 109
         ung 3555393 .. 3555421 -  -4.5  -4.53303   CATCTGCAGACAAAA        CAGCGGGTAAC GCACAAT GCCACCCCCTG        TTCATGCCCCCGCTC  71 58
    AHA_3141 3554700 .. 3554725 - -20.5  -4.67234   ATCGAACTGTAAAAA         CAAGGCCCCGG TTAA CCGGGGCCTTG          TTTTTTAAGAGAGTG 100 48
      agcS-2 3551170 .. 3551188 -   -16  -4.06903   AACTCCCAAACGAAA             GGGGAGCC AGT GGCTCCCC             TTGTTGTCAGACAAC 100 55
        ampC 3545692 .. 3545716 - -17.2  -3.09834   GAGGCCATGAGGCAA          CAACGCCGGG ACTTG CCCGGCGTTG          TTCTGTATCCATCTC 100 79
    AHA_3134 3543722 .. 3543739 -  -2.6  -3.65314   TCCAACCCTCAACAA             TCGGCG GTTTTA CGCCCA              GTCAGCGCGGATTGA  50 27
    AHA_3133 3542336 .. 3542349 -  -2.3  -4.98531   GCTTTAAATTAAAAA               GCCGA ACTA TCGTC                ACTATTTATGATAAT  74 269
    AHA_3132 3540494 .. 3540528 - -13.5   -2.8805   AGTACGGTTGACAGA     CGGGGGAGAGGCAGG TCAAT CCTGCCCCTCCCCAT     GCCTGTATCAGGCCT  81 33
    AHA_3129 3537663 .. 3537683 - -18.3  -5.10208   GAACGGTAATAAAAA            GAGGCGGCC CCG GGCCGCCTC            TTTTCTATCCTGCCT 100 64
         tkt 3530814 .. 3530839 - -16.9  -5.30686   AACAGCCATAAAAAA         CGCCCCCCATC TTGC GATGGAGGGCG          TTTTATCGTTCCGGC 100 84
        hchA 3526894 .. 3526919 - -20.5  -3.10344   GCCTGACCCAATAGA         GCAGGGCCGTC ACTC GACGGCCCTGC          TGTTTCATCTCCTGC 100 80
      tyrS-2 3522968 .. 3522986 - -11.7  -5.11063   ATGAGCCAACAAAAA             GGCCTCC GCAAG GGAGGCC             TTTCTTATGGCGCCG 100 55
    AHA_3112 3516299 .. 3516320 - -15.9  -2.97513   ACAGCCACAACGACA           GAGGCCACC CAAG GGTGGCCTC            TTTTTGTTTCGATAT  87 50
    AHA_3109 3511935 .. 3511981 - -10.8  -3.37028   AGGAAGAGCTGACAA GCGGCGCCCTGGTACCGCTGG ATCTGG CGAGCGGCAAC-GAGCGCCAC CTCTATACCTATCTG  69 197
        sohB 3509059 .. 3509076 - -14.1  -5.15634   GACGCCATCAAAAAA             GCCGGGC AAGT GCCCGGC              TTTTTCATTTGGTTT 100 55
        topA NONE
    AHA_3103 3504003 .. 3504017 - -11.4  -3.50572   AGCCACCCGACAGAA               GCGCCA CAA TGGCGC               TTCTGTCGTTATTGA  77 425
    AHA_3091 NONE
    AHA_3090 3487033 .. 3487046 -  -3.8  -4.70169   TTACAGGCAACAAAA               GCTG GCAAAG CAGC                TCCCGTCGACCAGAT  72 428
    AHA_3088 3486645 .. 3486660 -    -9  -5.37345   CTTAATGACAAAAAA              GACAGC CGCA GCTGTC               TTTTTCAATTGAAAC 100 46
    AHA_3087 3486017 .. 3486054 -  -9.1  -4.26079   GCAAACCAGCCAAAA   GAAGGCCACGGTGCC-CC TGA GGCAACACCGTGGCACCC   AGCCTTACTTGGGTT  84 30
    AHA_3086 NONE
    AHA_3085 NONE
    AHA_3084 3483900 .. 3483916 - -11.5  -3.05844   TCGTTGAGGTGAACA              GGCACCC TAC GGGCGCC              TGAACAAAGCGCCAG  72 51
    AHA_3083 NONE
    AHA_3082 3481864 .. 3481909 - -13.9  -3.90922   AGCCTGTCGAAATAA CGGTCAGGGTGACAGCC-TGCC TCT GACAAGGCAGGCCCCCCGACCG GCATCAGATGGAGAG  93 29
    AHA_3081 3481147 .. 3481158 -  -4.4  -3.17529   CCAGAGAGGAATAGA                TCTG GATT CAGA                 TGAATTTACACCTCG  49 31
    AHA_3080 3479638 .. 3479656 - -17.4   -4.3586   CCACCCATAGCAAAA             CGCCCCGC AAA GCGGGGCG             TTGTCGTTAAAAGGC 100 72
    AHA_3073 NONE
        atoS 3469809 .. 3469834 -  -9.7  -5.00616   CTCGCCCGTAAAAAA         GCCCGCCAAGA CCAA TATTGACGGGC          TTTTTTGTGCCTCAC 100 198
    AHA_3069 3466677 .. 3466696 -  -7.2  -3.51924   GCTTGAGCTAGATAA            TGGCAATT ATCG AATCGCCA             TCAACAATTACGACA  62 33
    AHA_3068 NONE
    AHA_3067 3465230 .. 3465246 -  -2.3  -3.68256   CCCCCAGGAAAAAAG              TGACT GGCAGGG AGTCA              GGATCCCAAATGCTC  50 23
    AHA_3066 3463403 .. 3463426 -  -3.1  -2.80816   TGTTCAGTCATCAGA          GCCC-CCTCA CACCT TGAGCTGGGC          GGCAGGATCCGCCGC  41 8
    AHA_3065 NONE
    AHA_3064 NONE
    AHA_3063 NONE
    AHA_3062 NONE
    AHA_3061 3457934 .. 3457951 - -14.1  -4.42974   GGCAGACACAACAAA             GGGGCGC CGCA GCGCCCC              TTCTTCTCTTTCATC 100 59
    AHA_3059 3454780 .. 3454799 -   -15   -5.4833   TCAGGTAACAAAAAA            GGGGTGGC CATG GCCACCCC             CCTTCTATTGCAAGT 100 56
        uraA 3451498 .. 3451527 - -16.5  -4.42386   GGCGCACCGACAAAA       CAGAGAGGCCACC CTGG GGTGGCCTCTCTT        TCATCATCTCAATGC 100 57
    AHA_3047 3436712 .. 3436730 -  -2.3  -3.52102   ACCCGATGCAGACAA             GATGAGG ATATG CCTCCCC             TTTTTCAAGCCATAC  47 59
    AHA_3046 NONE
    AHA_3045 3431539 .. 3431569 - -19.9  -3.25823   CGGGTTGCACACCAA       CAAGAAGGCCCCT TTGAC AGGGGCCTTCTTG       TTCATGGATGGTGAG 100 54
    AHA_3043 NONE
    AHA_3042 3428867 .. 3428884 - -11.3   -5.4505   CGCCGCAACAAAAAA             CCGAAGC CCTG GCTTCGG              TTTTTTTATGGGCGT 100 48
    AHA_3037 NONE
    AHA_3036 NONE
    AHA_3035 3421434 .. 3421449 - -10.4  -5.64274   CCAGCCATAAAAAAA              CCACCC GTTC GGGTGG               TTTTTTGTTGCTTGC 100 57
    AHA_3033 3419435 .. 3419452 - -11.3  -5.08255   ACGCCGAAAAGAAAA             GGGCATC TCTC GATGCCC              TTTTGCTTTGCTGCG 100 55
    AHA_3028 3414541 .. 3414555 - -11.4  -2.95491   AAACCCCACGACAGA               CAGCCG TTT CGGCTG               AGGTGACAACGGCAT  71 58
    AHA_3027 3414376 .. 3414414 - -16.3   -3.7035   ACATCAAAAAACAGA  CA-ACAAAAAGCCCACTC GCAG GAGTGGGCTTTTTGCATG   AAGGCTGGAGCGGGC 100 31
    AHA_3025 3412767 .. 3412777 -  -3.2  -3.72893   CATTCTTTCATCAAA                 CAGA GTC CCTG                 ACAATCCAGTGGGAT  51 10
      rraA-1 3412028 .. 3412068 - -13.9  -2.57881   CAATCCGGCTACAAC  CTGAGCTCGGGGGTGCGCT ATC AGCTCTCCCCCATGCTCAA  CATCGGCAGCCAGCT  71 197
    AHA_3022 3411110 .. 3411139 - -20.9   -3.3879   AAGGGAGTGCAAATA       GCAAAAGGGACGC CGTG GCGTCCCTTTTGC        GTTGGGCCGTCAGCT 100 73
    AHA_3020 3408431 .. 3408445 -  -9.2  -3.13403   TGGCTTTTAGCAATA               CCGCGC CGG GCGCAG               CGCTGTCAACCTAAA  63 36
    AHA_3019 3408262 .. 3408286 - -12.9  -5.11063   ATCATCCAACAAAAA          GGCCCGTAC TGGGTGG GTACGGGCC          TTTTCTGATTTCTGT 100 58
        thrA NONE
        thrB NONE
        thrC 3403431 .. 3403460 -   -13  -5.36441   GTGCCAGATAAAAAA       TCCCCCGCTCTTT ATAAA AAAG-GCGGGGGA       TGTTCATTTCTTCAC 100 47
    AHA_3015 3401192 .. 3401215 - -12.4  -5.24129   GGGCTGGATAAAAAA          GCCCGG-CGCC ATT AGCGGCCGGGC          TTTTTCACGTTCGGG 100 63
    AHA_3013 3397539 .. 3397553 -  -2.8  -4.77157   TCAAGCCATCAAAAA               TCTAGA AAA TCTAGG               ACACCCACCTTTCTG  70 78
    AHA_3011 3395158 .. 3395185 - -16.2  -4.56597   CCCTGCGCCCAAAAA        GCGCGGGGGGCC TGCT GGCCCCCCGCAA         ACACACCAAATGAGA 100 48
      deoD-1 3394108 .. 3394130 -  -6.9  -4.08064   AACTGGGTCGCAAAA           CCGGCCATC ACGAA GTTGGCCAG           GAAGCTGATGGCAGT  70 115
    AHA_3005 3386679 .. 3386711 - -12.8  -3.95787   GAGCAGACGCACAAA     TGC-AGAAGGGGAGC CATG GCTCCCCTTCTTGCT      GTGCACGCCGCGCTC  93 69
    AHA_3000 3379263 .. 3379277 -   -10  -3.53012   GGTTCTTTTCCCAAA               CGAGAC GAT GTCTCG               GCACTAGAAGTTGGC  71 29
    AHA_2999 3377901 .. 3377930 - -20.9   -4.1196   AACTTAGCCGCAAAA       CAACAAGGCCACC CAGG GGTGGCCTTGTTG        CTACTATGGACTGCC 100 47
    AHA_2997 3375321 .. 3375350 - -20.9  -4.06148   AAGAGCCCATATAAA       GAAGAACACCGCC AACT GGCGGTGTTCTTC        TTTATGCAAGGTTGG 100 52
    AHA_2995 3374119 .. 3374151 - -10.6  -2.98223   GATTGACACTATATA      TTACCGGCAGCATC CGCTC GTTACTGCCGGCAA      TGCAGCTCTGCAACC  68 72
    AHA_2994 3373326 .. 3373350 - -12.2  -4.11183   GGTGAGCACAAATAA          TAATGCCGCC TCATG GGCGGCATCA          TTCATGACTGATCCC  91 46
        grpE 3359937 .. 3359954 - -14.1  -5.06816   ACTTGCCAATAAAAA             GCCCGCC GAGC GGCGGGC              TCAGCACAGCGATGG 100 44
        dnaK 3357696 .. 3357740 -  -7.8  -3.08371   CAGACCGTGAACAGA TTCTGAGCC-GATGGGCGAAG CCTG CTTCGCCCATCTGGGTCGGGC TTACTTCTTGTCGTC  57 26
        dnaJ 3356302 .. 3356322 -   -14  -5.42862   ACAGGGGCAAAAAAA            GAGCCGGC ACAGG GCCGGCTC            TTTATATCTGGGTCG 100 47
    AHA_2981 3354520 .. 3354541 -  -4.5  -2.62184   TGTTGGCTGACATTA           TCAGCTAAA CCGT TTTAGCCAA            CCAATAGATCCCGGC  44 74
    AHA_2980 3353487 .. 3353528 - -15.9  -2.68434   TGTCACATGAGAGTA GGGGCTGTCGAGCCG-GGCT TCT AGCCGCGGATCAACAGCCGC TTGTGCCTGATCGCA  85 15
    AHA_2979 NONE
    AHA_2978 NONE
    AHA_2977 3349548 .. 3349583 - -19.8  -4.18018   CTCCGCCATTGAAAA    CGCAAAAGCCCCGCCA CTGC CGGCGGGGCTTTTGCT     TTTCAGGATGCGGGG 100 44
    AHA_2973 NONE
    AHA_2972 NONE
    AHA_2971 NONE
    AHA_2970 NONE
    AHA_2969 3342039 .. 3342062 - -16.8  -2.53213   GAACGTGTGAAGCGA          GAAGGGCCAC CGAA GTGGCCCTTC           TGTCATTGTGCGCCC  89 28
        lplA 3338053 .. 3338069 - -10.8  -4.56597   GGCGGCTGGCAAAAA              GGCGCC TTTCG GGCGCC              TCTTTTGATTTTGTG  95 70
    AHA_2966 3336182 .. 3336218 - -18.8  -4.36914   GCTTGGCGTATAAAA   GAGCAGGGCGCAGGAGG AAAC CCGCCTGCGCCCTG-TC    ACTGCCGCACCATCA 100 38
    AHA_2965 3335129 .. 3335151 - -13.4  -4.65916   GTCATTTCAATAAAA           GACGGCGGGA TCA TCCCGCCGTT           TTCTTTTACTGCGCT 100 89
    AHA_2955 3318779 .. 3318799 - -10.4  -3.68936   CAGCAAGGGCAACAA            CGCCAAGG GCAAG CCCTGGCG            GGTGGCCATCGTCGA  74 509
         azu 3317330 .. 3317346 - -15.1  -5.28778   AGCAGGCACAAAAAA              GCCGGGC AGT GCCCGGC              TTCTGGGTCGACAAG 100 47
    AHA_2952 3316862 .. 3316886 -  -4.9  -3.90112   TGGCGGTCAACGAAA          CTCTGCTGATC AGC GGCGAGCAGAG          CATCCACTTCGACTG  60 112
    AHA_2950 3315092 .. 3315110 -    -8  -2.78384   TTGGCGCGGATCACA             GCCGCGCC TCA AGCCCGGC             CGCAGGCCACCCTGC  57 53
    AHA_2949 3314640 .. 3314660 - -18.3  -4.02108   CCGACCATAACGAAA            CGGGCCTCC AGT GGAGGCCCG            TTTGCTATGTGAGTG 100 46
    AHA_2946 NONE
    AHA_2945 NONE
        cyoC NONE
    AHA_2943 3306900 .. 3306914 -  -2.8  -3.05715   AACCTGCTCAGTGAA               CCATCA TGT TGATGT               TGAGGTTGTACATGA  43 3
        cyoE 3305902 .. 3305927 - -19.1  -3.78934   GCGGCCCCATAATAA         CAGAGCCGGGA AGGT TCCCGGCTCTG          GATTCTATTGATTTT 100 82
    AHA_2941 3304392 .. 3304410 - -13.1  -5.06816   ACTGCCCAACAAAAA             GCCCGCC GAATT GGCGGGC             TTTCTCATGCAGGCA 100 48
    AHA_2934 3295714 .. 3295740 - -17.2  -2.82015   GCCAGATGGACGACA         CCCCGCCGCGCC AGT GGCGAGACGGGG         TGTACATGGGGGCAA  91 48
    AHA_2933 3295102 .. 3295119 - -11.3  -5.60993   TTCGCCATAAAAAAA             CCTCTGC CCAG GCAGAGG              TTTTTGCTTTTCGAT 100 43
    AHA_2930 3293091 .. 3293106 -  -3.3  -3.54129   CATAGTTGCTGCAAA              TTCAG CACGTT CTGAA               GAACCAAACCCGTAT  49 257
    AHA_2921 NONE
    AHA_2920 NONE
    AHA_2919 NONE
        scpB NONE
    AHA_2917 3278991 .. 3279011 - -15.4  -5.06816   AGGCGCCAACAAAAA            GGCCCGCC GAAGA GGCGGGCC            TGTTGCAGGGCGACC 100 58
        tesB 3277903 .. 3277934 - -23.2  -3.63968   GGGTAAAGCCCCAAA      GTCTGACCTGCGCA AAAC TGCGCAGGTCAGAC       ACTATCATGGCGTCC 100 62
    AHA_2915 3277450 .. 3277492 - -19.4  -2.58999   GCCTGATAGAGCAAG CAGATAAAAAAACGGGAGCC ATC GGCTCCCGTTTTTTTATTAG GTGTTTTCTTCCGGC 100 22
        acrA 3273310 .. 3273324 -  -2.1  -2.65504   TGTCTATGAAAAATC              GT-GCC ATGA GGCGAC               TACTCCATCCTACTT  38 35
    AHA_2910 NONE
    AHA_2909 3268701 .. 3268726 - -20.5  -4.64861   TTTGCTCAAAAGAAA         CGGGGCGAACC CGAT GGTTCGCCCCG          TATTGACCTGCTGAT 100 58
        rfbB NONE
        rfbD 3265951 .. 3265965 -  -5.7  -5.86976   CTACAAAAGAAAAAA               GTGGT TTGAT ACCAC               ACTCTTCTGTTTTAT 100 85
        rfbA 3265006 .. 3265022 -  -6.5  -3.53811   TTTATTCGTGGTAAA              GAGTGGC AAC ACCACCC              AGATATCACATCAGA  60 31
      rfbC-1 NONE
    AHA_2904 NONE
    AHA_2903 NONE
         gmd NONE
    AHA_2901 3259343 .. 3259373 -  -8.5  -4.19817   TCCATTTATTTAAAA       TAACCCTTCAT TCATAAAAT ATGAAGGGTTA       CCTATCTGAACACTA  77 38
    AHA_2900 NONE
    AHA_2899 NONE
    AHA_2898 NONE
    AHA_2897 NONE
    AHA_2896 NONE
    AHA_2895 NONE
    AHA_2894 NONE
    AHA_2893 3250680 .. 3250690 -  -5.4  -2.78495   CCAGCATCAAGACGA                 CTCA CTA TGAG                 AAGATGCCATCAGAG  47 6
    AHA_2892 NONE
    AHA_2891 3247634 .. 3247651 - -12.7  -5.83822   CAGAGCCAAAAAAAA             GCGCCCA ATGA TGGGCGC              TCATTTACAAACTCA 100 38
    AHA_2890 3246234 .. 3246246 -  -3.3   -4.5477   CAATAGATGACAAAA                CAGCC AAC AGCCG                CTCAATAAACAACCG  67 375
        wecA 3245059 .. 3245074 -  -3.3  -2.70446   AAGGTGATAAAAATT              GCTAA TTCCTC TTAGC               TCTATTGGCATCAGT  41 11
    AHA_2888 NONE
    AHA_2887 NONE
    AHA_2886 3241635 .. 3241653 -  -5.2   -2.5092   TAATACTCGAGCAAT             GCTAGGCT TCA AGCACAGC             GCTAATTTCGGCGTA  46 27
    AHA_2885 NONE
    AHA_2884 NONE
    AHA_2883 NONE
    AHA_2882 NONE
    AHA_2881 NONE
    AHA_2880 3235512 .. 3235539 - -12.7  -3.07043   TTCATTATTGTAACA        TGCGGTTCCCC TACAAG GGGGAACCGCT         ATCGACATATTAGTC  81 35
    AHA_2879 3234005 .. 3234023 -  -9.5  -3.82419   AAAAAGCAGGAACAA             GGGAGGC ACAAG GCCCCCC             CCCTAAATTCCATCT  76 100
    AHA_2878 NONE
    AHA_2877 3230765 .. 3230795 -   -17  -4.98917   GAAAAGAGAATAAAA       GATAAGGCTGCTCG GTT CGAGCAGCCTTATT       GGACTTATTTGGTCG 100 426
    AHA_2876 NONE
    AHA_2875 NONE
    AHA_2874 3227163 .. 3227189 - -11.6  -6.11229   ACCAAAACAAAAAAA         GCCGCGATAGCA GAA CACTATCACGGC         TTGTTGTCTTTACGA 100 60
    AHA_2873 3225360 .. 3225375 -    -4   -3.4582   GCAGTTGATGAAACA              TCGCGCA GCC TGC-CGA              CCCCACATGGCCTCG  49 51
    AHA_2872 3224557 .. 3224570 -  -9.5  -5.61596   AGGCGCACAAAAAAA               GGCGC CTGG GCGCC                TCTTGATGGACATAT 100 51
    AHA_2871 3220482 .. 3220511 - -20.9  -3.97674   GCACGAGCCAAATAA       CAAGGGGAGCATC ATTG GATGCTCCCCTTG        TCTGTAGCCCGAGTC 100 53
    AHA_2869 3218769 .. 3218785 -  -4.4   -4.3129   GAGTCAGCAGTAAAA             CGAGGCA TCCT TGCC-CG              GCAGATCAACCACGC  66 31
    AHA_2868 3217369 .. 3217392 - -13.9  -4.30161   TGAGAGAAAACGAAA          CAGGGAGCC GCATCG GGCTCCCTG           TCAGGATGAGGACGG 100 123
    AHA_2867 NONE
    AHA_2866 NONE
    AHA_2865 3214007 .. 3214034 - -14.2  -3.97674   GGATTACGCAAACAA        TTTGTGCCCTGC CACG GCAGGGCACACA         TGTCACAATACGGGG 100 28
    AHA_2864 3213578 .. 3213602 - -15.7  -5.38054   GTCCATAAACAAAAA          GCCGTGGAACC AGA GGTACCACGGC          TTTCTTAAATTCTGT 100 46
    AHA_2862 3212877 .. 3212892 -  -5.4   -4.0616   CATGGCAAGGAGAAA              GCCCAA TAGT TTGAGC               CAGCGCCCACTAAAG  63 327
    AHA_2861 3212128 .. 3212138 -  -6.8  -2.96216   GTCCAGTATGAGAGA                 TCGG TCA CCGA                 TTTTTCGCGATCTCA  53 38
    AHA_2860 3211589 .. 3211610 -   -13  -5.03994   CGGCAGATAGAAAAA           GACCCCGC ACACTG GCGGGGTC            TTTTTTTGCAACCGT 100 80
    AHA_2854 3203573 .. 3203595 -  -3.3  -2.70932   TCCTGCCTTCAAGCA          GGC-TCAGGC AAAC GCCCGCTGCC           AATCCTGATCAAACT  41 6
    AHA_2852 3202793 .. 3202826 -    -6  -3.16191   CGAGATCCTGAGCAA     CACCCCCGGCAT CACCGCCACC ATGCTGGAGGTG      GCCGCCAACCATCAC  51 487
    AHA_2851 3200842 .. 3200885 -    -3  -3.58343   GCCATCATCGCCAAA CCGGTGATGATGAGTGGCACC GTG GATGCGA-TCAGCGCCTCCGG CATCCGCATGGGCAG  51 368
    AHA_2849 NONE
    AHA_2848 3197513 .. 3197529 - -10.1  -2.71681   CAACCTGCTCAAGCA              GCACCAG GCG CTGGCGC              TGCCCGAGCTGGCAG  60 391
    AHA_2844 NONE
      cheR-3 3194372 .. 3194405 -  -6.1  -2.64107   GAAATTGCCATAGCA     CACCTCCTGCT TGAGAAATTATT AGCAAGAGGTG      TGCCAAAGAGGGATT  49 51
        flgB NONE
        flgC NONE
        flgD NONE
        flgE 3191426 .. 3191441 - -11.8  -4.76644   AATACCCATGAAAAA              GGGCGC CGAA GCGCCC               TTTGTTAACAAGAGA 100 45
        flgF NONE
        flgG NONE
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 3183591 .. 3183619 - -18.2  -2.72379   CCAAGCGGGTAACCA        TCGCTCGCAGCC ATCAG GGCCGCGAGCGA        TGGGTGACCCGTCAA  95 37
      mgtE-1 3181742 .. 3181759 - -12.7  -5.36441   CGGCGAGACAAAAAA             GGCAGCC CACG GGCTGCC              TTTTACATTTTCGGG 100 49
    AHA_2827 3176446 .. 3176502 - -9.89999   -3.1676   AGAGAGGCAGGAACA CGAGCTGGTGCGCCAGTTTGCGGCCGG CAG CAGGCCGCAAACTGGCGGTGGGGATCA ATGGCGGGCGTGAGT  68 23
    AHA_2826 3174764 .. 3174796 - -17.9  -4.62471   AATTTACATATAAAA      TCAAAGCCTTGAAGC TAG GCGTCAAGGCTTTGA      CCCTTATGCTTCCTT 100 29
    AHA_2825 3173616 .. 3173626 -  -6.8  -2.78935   ACACCTCCCACCACA                 GCCA ACC TGGC                 CGCTGCAATATTCAT  52 58
    AHA_2824 3172124 .. 3172162 - -13.3  -2.91276   GGGTCCCTTATAAAG  GCGCCGACCCCTGTGCTGC GAT GCAG-ACAGGAATCGG-GC  TCATAACGCCGAGGC  81 117
    AHA_2823 3171254 .. 3171277 - -16.8  -3.97622   GCATGCAAAATAGAA          CAAGGGAGGC CCAG GCCTCCCTTG           TCATTTCTATCTACC 100 93
         upp 3168653 .. 3168677 - -18.6  -2.70946   GGGCGGGAGAAACAG          CGGAGCCGGC GGGAT GCCGGCTCCG          TTTGCGCGCCTGCTG 100 64
    AHA_2819 NONE
      dnaA-2 3166417 .. 3166435 - -17.4  -4.39166   CTTGAGATAGCAAAA             CCCCGGCC ACT GGCCGGGG             TTTCTTTTTTGAAAG 100 217
    AHA_2814 3161308 .. 3161337 - -14.3   -3.6392   TATAGGAAAGTATAA       CGCGCGAAGGCGGC CTC GCCGACTTCGC-CG       TTCTCAGTCAGTGGG  95 29
        pstC NONE
    AHA_2812 NONE
        pstB NONE
        phoU 3155433 .. 3155447 - -11.4  -5.52096   AAAGGCAACAAAAAA               GGCGCT CAA AGCGCC               TTTTTATTCATTTCA 100 44
    AHA_2809 NONE
    AHA_2808 3153339 .. 3153372 - -19.7  -4.00038   CACCAGGATGAGAAA     CGACAAGAGGCCACC CGAA GGTGGCCTCTTGTGG      CGACAAGTGCACTGG 100 45
    AHA_2807 NONE
    AHA_2806 3150763 .. 3150788 - -14.7  -4.52857   ACGTCGCAGACAAAA         TGAGAGCGCCC CCTT GGGCGCTCTCT          TGCATTGGATCACCA 100 47
    AHA_2804 3148806 .. 3148834 - -18.3   -4.7497   GTGACCCACCAAAAA        CAGCAGAGGGACT CTC AGTCCCTCTGCTA        TTGGCCGAAACCCTG 100 78
    AHA_2803 3148134 .. 3148164 - -24.2  -3.95073   CGCCAGAGGTATAAA       CAGAAGAGGGAGCC CAT GGCTCCCTCTTCTG       TTTATACCTCTGGCG 100 48
    AHA_2799 3143703 .. 3143721 -  -2.2  -3.78934   GTGCTCCCACAAGAA             TTCGGCGG GGG CCGCCACC             GGCTTCGTCGGCCTG  52 213
        rbgA 3133937 .. 3133958 - -17.3  -4.44667   CTGCCCAACAACAAA           GAGGCGGCC CAGG GGCCGCCTC            TTCATGAGTACCAGA 100 52
    AHA_2789 3132349 .. 3132372 - -13.8  -3.91488   AACCGTTGCAAACAA          CGAGGCGGCC CTGG GGCCGCCTCT           TCTTTATACCGGGTA  93 117
    AHA_2785 3126900 .. 3126919 - -13.6  -5.23292   GCAGATAAAACAAAA            CGGCCAAG CAAG CTTGGCCG             TTTATCAACTAAATC 100 56
    AHA_2784 3125690 .. 3125708 -  -5.9  -4.87133   ACGTGGCAAACAAAA             GCGCCCA TCTGG CGAGCGC             TTCGTCAACTCTTTA  83 95
        aspC 3124358 .. 3124381 -   -21   -5.1417   TCAGAAAATGAAAAA          GCCCGCCGGG TCTC CCCGGCGGGC           TTTTTACTGAACGGA 100 56
    AHA_2779 3119443 .. 3119459 -  -7.9  -3.30124   TTTCACCCGGCATAA              GCAGCGC GAT GCCCTGC              GCTCCGGTTCAGCGA  59 34
        msbA NONE
        lpxK 3116415 .. 3116428 -  -3.8  -3.06171   TCGAACAACCAGATA               TGCC ATGTGG GGCA                TGATAAGCCCCTGCT  45 62
    AHA_2776 NONE
        kdsB 3115351 .. 3115368 - -10.5   -5.5762   ATTAAACACAAAAAA             CGGCGCC CGCA GGCACCG              TTCAGAGTCATTTTT 100 54
        uvrY 3114502 .. 3114517 - -11.8  -5.18355   GGCAAAAAGCAAAAA              GGCGGC ACAG GCCGCC               TTTGATGGCTACACG 100 48
        uvrC 3112458 .. 3112483 -  -6.9  -3.38046   CCGTCAGGGCAAACA         GGGGC-AACACG AGG CGTATTCACCCC         GTCTCGGCTACCAAT  58 43
        pgsA 3111540 .. 3111554 -  -2.1  -3.10589   CAAAAATGTTTAATA              CCCTGA TCGT TC-GGG               TGTTTTTTGCCCTTT  42 114
    AHA_2771 3111360 .. 3111372 -  -7.7  -4.18197   ACGCGCCATGCAAAA                GAGAG AAA CTCTC                TATTGTCTGAATTTG  74 39
    AHA_2770 3111254 .. 3111268 -    -7  -3.16742   CGTAATCGGTATCAA               GCTCGC GCC GCGGGC               TTGTCAATATGGAGG  56 34
    AHA_2769 3111109 .. 3111128 - -13.6  -5.65496   GACCAAAAACAAAAA            GGCCGCTA TTGC TAGCGGCC             TTTGTAAGTCTTTGA 100 47
    AHA_2767 3106896 .. 3106917 - -15.9  -4.45738   CAGCCCAACAATAAA           GAGGGGAGC CCAG GCTCCCCTC            TTTCATCATCTCGTC 100 102
    AHA_2763 3100743 .. 3100760 - -11.3  -5.06414   GCCTGGCAACAAAAA             GGAGCTG GTGA CAGCTCC              TTTGACGGTCATGAA 100 99
    AHA_2762 NONE
    AHA_2761 3099328 .. 3099346 -    -3  -2.85354   GAGTCGAAGTGAAAC             GCTTCATG CCA CATGGTGC             CTCCCTCCCGCCAGC  41 69
    AHA_2760 3098328 .. 3098344 - -13.7  -5.52023   AGCAGCAATAAAAAA              GGCGGGA AGA TCCCGCC              TTTTGTTTGCCTGCG 100 69
        cysS 3094766 .. 3094785 -   -15  -4.12188   GCAGTATGCCGAAAA            CCGCAGCC CTAA GGCTGCGG             TTTTTTATTAGCTCA 100 70
    AHA_2755 3094476 .. 3094520 - -18.2  -4.39571   GGCATAAAGGGAAAA GGC-ATAAAAAAACCGCAGCC CCAG GGCTGCGGTTTTTTTATTGGC TCAACCGGTTGGCAC 100 26
    AHA_2753 3090189 .. 3090202 -  -3.7  -2.78816   TCATCTTCCATCACA               CCCCG GCCG CGGGT                CAATCGCCGGTTGCC  43 295
    AHA_2752 3088727 .. 3088744 - -14.1  -4.72272   GGGCGGCATGAAAAA             GGGGCCC GCCG GGGCCCC              TTTTGCTTGTCTGTC 100 53
    AHA_2744 NONE
        feoB NONE
    AHA_2742 3080282 .. 3080300 -   -16  -5.06816   ACGCGCCAATAAAAA             GACCCGCC AGC GGCGGGTC             TTTTTTATATCTGAA 100 74
    AHA_2737 3075633 .. 3075647 -  -2.1   -4.7497   GCGAGTCATGAAAAA              CGCATG ATAA CA-GCG               TGTTACTACCCGAGG  68 41
    AHA_2736 3074533 .. 3074547 -  -8.5  -3.14132   GCTGGCCGCCAGCAA               GGGGG GCTGA CCCCC               GAGGTGATCAGGTGC  60 33
    AHA_2735 3073749 .. 3073771 - -11.3  -4.56597   CGTCTTCTTCAAAAA          GGCCCTCGGC TGAC GCC-AGGGCC           TTGCTTGTCTCTCAC  95 37
        dgkA 3071517 .. 3071535 - -11.7  -4.72272   GCCGTCCAGCAAAAA             GCCCGTC GTGAT GACGGGC             TTTTTTATGCTGCGA 100 186
        dapB 3065690 .. 3065705 - -11.8  -5.52023   ATCACCAATAAAAAA              CCCCGC ATGA GCGGGG               TTTTTAACAGACGAA 100 97
        carA NONE
        carB 3060634 .. 3060653 -   -15   -5.4505   TTTGCCAATAAAAAA            CCCCGCCA TCGC TGGCGGGG             TTTTATCGGGTCACG 100 71
      leuA-2 3058504 .. 3058530 - -15.1  -3.54297   AGCCATCAATGACAA         GGGCCCCCGCC TGCGT GACGAGGGCCC         CCAAGGGTCGATACG  95 50
    AHA_2721 3057174 .. 3057199 - -19.1  -4.56358   GATATCTACATAAAA         CAAAGGCGGCC CATT GGCCGCCTTTG          TTATTGCAGTTACAG 100 35
    AHA_2718 3052556 .. 3052585 - -10.8  -5.52384   GGGCCATCAAAAAAA      TC-GGGCCCGCTCC GGCT GGAG-GGGCCCAGA       CAGCAAAACGGCGTC 100 39
    AHA_2717 3051694 .. 3051716 -  -9.1  -3.17186   AATGAGAGCAACAGA          CGGC-GAGGC CCCT GCCCCGGCCG           GTCAGCGAATGCGGT  65 27
    AHA_2716 3050895 .. 3050913 - -10.3  -4.21194   CGGCATGAGCGAAAA             GTCGGTG CAGAC CACCGAC             GGCTGTGCCTGACAT  86 197
    AHA_2715 3049493 .. 3049507 - -12.8  -3.66139   GACAGAGATGGCAAA               GGCGCC AGT GGCGCC               TTTGCGGTTCAATAG  86 56
    AHA_2714 3048755 .. 3048773 - -13.1  -5.24129   CGCGCCTATAAAAAA             CCCCGGC ACCGG GCCGGGG             TATCAGACAGATGGA 100 52
    AHA_2713 3047460 .. 3047475 - -11.8  -3.83568   CGACATGGACAAGAA              GGGGCC TTGC GGCCCC               CGGTCGGCAAATCAG  86 37
    AHA_2712 3046489 .. 3046528 -  -4.3  -3.79251   GAGTGGATCACCAAA CGACTGCGGCAGGT-GACG GATG CGCCGACCTGG-GCAACCG  GGTTGCCGAGCGGGG  56 485
        soxR 3045390 .. 3045401 -  -3.6  -3.55444   CCTTGACGGTGTAAA                CGAG TCGG CCCG                 GTGCATGGCATGGCT  51 60
    AHA_2709 NONE
    AHA_2708 3044334 .. 3044363 - -13.5  -3.13522   ACTGGCCGAGGAATA       GCCCCGCTGGCGG CGCT CCGCCAGCGGAAA        CCATGTCAGGCGGGT  84 31
    AHA_2707 NONE
    AHA_2706 NONE
    AHA_2705 3041800 .. 3041821 - -17.3  -3.66095   AAACTGCCATGCAAA           CAGCCCCGC TCGT GCGGGGCTG            TTTTTTTATATCGCT 100 60
    AHA_2702 3034028 .. 3034038 -  -3.2  -4.03413   ATCCCGTGACATAAA                 GAAC AGA GCTC                 CCCGAGAAGGGATCA  56 322
    AHA_2701 NONE
    AHA_2700 NONE
    AHA_2699 3028949 .. 3028979 - -21.2  -3.58726   GGCCGTCAGAGACAA       GGGATGGCGGCAGC CCG GCTGCAGCCATCCC       TTTCACTCGCATCAA 100 58
    AHA_2698 3026169 .. 3026184 - -11.8  -5.88565   TTTAGAATAAAAAAA              GGGCCC TTAT GGGCCC               TTTTGATTTGATAAC 100 43
    AHA_2697 3013229 .. 3013255 - -12.2  -5.08824   CCCTCAGTCAAAAAA         CAGGGGCCAGGT ATT ACCCGGCCCCCT         TAGCTGGTTACGGAT 100 33
    AHA_2696 3012570 .. 3012594 -  -8.6  -5.71712   CGCCACATAAAAAAA          GACCTCAATC TATTG GAGTGAGGTC          ATTATGCCCGTCGTC 100 50
    AHA_2695 3011797 .. 3011830 - -19.1  -4.59773   TTGCACGTCTAAAAA     CAACAAGCCCGAG-AC AGA GTGCTCGGGCTTGTTG     CAGAAAGGCAGGTAG 100 53
    AHA_2693 3009544 .. 3009569 - -19.1   -5.4756   AACGCCAATAAAAAA         GCGCCGGATAC AGCC GTATCCGGCGC          TTGTCGACTAGACCT 100 40
        ppsA NONE
    AHA_2690 3004623 .. 3004661 - -21.7  -3.07344   TCACCCGCTAACAGA   GGCAGGCACGGCCGGGC ACCCA GCCCGGCCTTGCCTGAC   AGTTGCCCAGCAATG 100 77
    AHA_2685 2997330 .. 2997349 -   -15  -5.74122   CACGACACAAAAAAA            CGGGCACC CGCG GGTGCCCG             TTTTTGTTCAAAGCC 100 56
    AHA_2683 NONE
       asd-2 2993849 .. 2993874 -  -5.3  -2.61272   ATATCGCGAAAAATT         CTCGGGGCTGCA GAG TGCGCCCCCG-G         TCACATCCACCCCAT  46 101
    AHA_2681 2991425 .. 2991451 - -14.5  -4.62783   CACCGATGCCAAAAA        CAAGGGGCAGCC CATC GGCTGCCCCT-G         CTTTCACCACTATGC 100 50
        truA 2990494 .. 2990506 -  -3.3   -4.7497   GCCAGTTACTAAAAA                CTGGT CGT ACCCG                GTGCCGAGTCCGGCA  70 6
        accD NONE
        folC 2988156 .. 2988168 -  -4.1  -3.54129   CAGACGGTTTTGAAA                CTTAG AGG CCAAG                TTGAATCCTACCTTT  51 99
    AHA_2677 2987315 .. 2987344 - -13.7  -5.47821   ATGCATCTAAAAAAA       TACCGCGCC-CATC CAA GATGCAGCGCGGTA       TTTTTTTACCTTGTC 100 48
    AHA_2673 2983659 .. 2983689 - -25.6  -3.83026   CGTCCGGATAGCAAA       TGCCCCGGCAACCA AGT TGGTTGCCGGGGCA       TTTCTGAAGATGGCG 100 36
    AHA_2670 2979510 .. 2979526 - -13.7  -5.27335   GCGCCCAAATAAAAA              GGGGAGC CAG GCTCCCC              TTTATCTCAATATGG 100 43
    AHA_2669 NONE
    AHA_2668 2975762 .. 2975815 -  -8.2  -2.74605   CGGGGCGAAAACGGA TCGGACCGGCAGGAAATAATCATT GATTTA AATCAACATTTCCTGCCGGCGCGC GATATTTATTGCAGT  57 31
    AHA_2667 2974062 .. 2974085 - -16.8  -2.64107   CAAATTCCGACAGCA          CAAGGCCACC CGCG GGTGGCCTTG           TTGTTGTATGGATGG  89 50
    AHA_2665 NONE
    AHA_2664 NONE
        hppD 2969696 .. 2969708 - -10.5  -2.66274   TGCTTGACAACCAAC                CCGCC CGT GGCGG                TTCCCGTTACGCATC  66 32
        hmgA NONE
    AHA_2661 NONE
        maiA 2966742 .. 2966783 - -23.7   -3.1247   AGTTGGCAGAGTGAA CACGGCAGGCCGGGTCGGG ATGA CCGGGCCCGGCCTGCCGTA  TGTCAGGGTTGGGCA 100 28
       add-2 2959239 .. 2959268 - -23.7   -2.8474   GCCCAGGCATAACGA       GACGCGCCCACCA TCAC TGGTGGGCGCGTC        GTTTTCTGCCTGTCA 100 60
    AHA_2649 2951906 .. 2951925 -  -3.4  -2.82635   AGCGTCAGCATCAGA            GCAGTTCC AGCA GGGCCTGC             AGCGGGTGCTTGAGT  41 1
    AHA_2648 2951375 .. 2951394 -  -9.3  -6.17184   AGGAGCAAAAAAAAA            GATGCCC ACGCAG GGGCATC             TTGCATCGAGGTTGA 100 44
    AHA_2647 2950694 .. 2950714 -  -3.1  -4.87626   GCGGAATAGCAAAAA            GGCGGCGAT TAT AGCGCCACT            TTGTTCTGCTGTCTT  74 136
    AHA_2646 2948709 .. 2948727 -   -16  -5.07486   GACGGGCAACAAAAA             GGCCGCTC GAT GAGCGGCC             TCTTTAGCTAGCAGT 100 47
    AHA_2643 2944028 .. 2944041 -  -2.3  -2.75963   AGCTTTAGGGCAAAC               CGATC AGTG GGTCG                AGGCAGCGTCCATCA  39 15
    AHA_2642 2943050 .. 2943065 - -10.4  -5.61881   CCCGAAAAACAAAAA              GAGCGC CAAG GCGCTC               TTTTTTATGGATTCG 100 47
    AHA_2633 NONE
    AHA_2631 2934311 .. 2934332 - -15.9  -3.40403   GCCTCGCCATCACAA           CACACGGGG CAGG CCCCGTGTG            TTTTATCTTCCGGTC 100 47
    AHA_2629 2931439 .. 2931458 - -10.6  -5.40072   TTTTTGCCAAAAAAA            CGGGGCCC CGCG GGGCCCTG             TTTTCACTTGGGTCA 100 44
    AHA_2628 2929790 .. 2929805 - -10.4  -4.73388   AAGGCTCATGAAAAA              GGCTCC CGCG GGAGCC               TTTTTGTTGTCTGTC 100 58
    AHA_2626 2927926 .. 2927941 - -11.8   -5.0133   CACCTTGTGAAAAAA              GGCGCC ATCA GGCGCC               TTTTTTCATGGTCAA 100 50
    AHA_2614 2912149 .. 2912167 - -11.7  -5.44198   AAGAAACAATAAAAA             GCCGGTC ACGAG GACCGGC             TCCAACAAAACAGAC 100 46
    AHA_2613 2910241 .. 2910260 - -16.4  -4.15044   CGCGGTTGTAATAAA            GGCCCGCC ATCC GGCGGGCC             TGCTTTGTTATGCGA 100 54
        oppB NONE
    AHA_2611 NONE
        oppD NONE
    AHA_2609 2906229 .. 2906251 - -16.3  -5.00616   CCCGGCTGCAAAAAA           CAGGGCGCC ACCCG GGCGCCCTG           TTTCGCCTGCTCATC 100 42
    AHA_2608 2904995 .. 2905012 - -12.7  -5.24129   CTTTGCCATAAAAAA             GGGCTCC CGCG GGAGCCC              TTTTGCTTGTTCGCC 100 43
    AHA_2606 2903049 .. 2903068 - -16.4  -4.26076   TCACCTCCATCAAAA            CGGCCCGC AGAT GCGGGCCG             TTTTTTTATGTCTCA 100 58
    AHA_2601 2898277 .. 2898302 - -20.5  -2.78216   CAGCCCCAGCAACGA         CAAGGCCCCGC AGAT GCGGGGCCTTG          TTTTTTACTGGCAAG 100 51
    AHA_2599 2895602 .. 2895620 -    -8  -3.09516   CCCCCCAGCAGGGAA             CCGGCCAG CAG CAGACCGG             CCAGAGGAAGGCGCG  60 44
    AHA_2598 NONE
    AHA_2597 NONE
    AHA_2596 2893010 .. 2893040 -  -8.9  -4.56597   GCCCTGGCGCAAAAA       GTGACTGCGCCCC GAGGG GAGGCGCAGTCGA       TAGTTGCAGTTGGTC  89 140
    AHA_2595 NONE
    AHA_2594 2891345 .. 2891372 -  -5.5  -3.78934   GCCCCGCCAGAACAA       GGGCATGGGGGCC GGCC GGCCCCC--GCTC        TGCGGCCCCCTTGGC  61 45
    AHA_2593 2890803 .. 2890823 -  -8.9  -2.90496   GGTGGTGCGAAAGGA            CCGGACCCC ATC GGGATCAGG            CGAGGTAACTCTGAC  62 21
      secD-2 NONE
      secF-2 2887805 .. 2887820 - -11.8  -5.61596   ATGCGCATAAAAAAA              CGGGCC CGAG GGCCCG               TTTTGCATGGGAATG 100 47
    AHA_2589 2885892 .. 2885916 - -13.6  -3.24747   GCCGGATAGTACGAA         GGGGGC-AGGC CCTT GCCTAGCCCCC          ATCCGAGGCAACAGA  87 108
    AHA_2588 2884027 .. 2884037 -  -2.4  -4.93296   CCACCAGGATAAAAA                 CCGC CGG GCTG                 CCTACACCAGCCGCT  72 27
    AHA_2587 2882090 .. 2882116 - -25.2  -5.60993   CGCCCCATAAAAAAA         CCGCCGGGCAGC GTG GCTGCCCGGCGG         TTTCATTCCGCAAGC 100 46
    AHA_2585 2879612 .. 2879628 - -13.7  -3.30701   TTCCATTAAAGCGAA              GGGAGCC ATC GGCTCCC              TTGATAGTTGAATCC  87 57
    AHA_2584 2878202 .. 2878221 - -13.6   -5.4505   CCCCGCAACAAAAAA            GGAGAGGC CAAG GCCTCTCC             TTTTTCATAGTGCGC 100 93
    AHA_2580 2874310 .. 2874330 - -14.1  -5.28778   AGCACCCACAAAAAA            GCCGATAAC CAG GTTATCGGC            CTTTGCCAAAGCAGG 100 53
    AHA_2579 2873433 .. 2873458 - -20.5  -5.56568   AGACCAGTAAAAAAA         GCGACGCAGGC CATG GCCTGCGTCGC          TTTTATTGGAATGGG 100 50
    AHA_2573 2866524 .. 2866551 - -18.6  -2.69151   TCGCGGGACAGATGA        CAAAGAGGTCGC CCAG GCGACCTCTTTG         TTTATTTGCCTATCC 100 63
    AHA_2571 2862829 .. 2862848 -   -15  -4.58585   CATGGAAATAATAAA            GAGGGGCC GGCT GGCCCCTC             TTTTTATTTAGGGTG 100 72
        msrA 2858742 .. 2858757 - -11.8  -4.86033   AAAGCCCGATAAAAA              GGCCGC AAAC GCGGCC               TTTTTCTTTTTCAAT 100 74
    AHA_2564 2856327 .. 2856343 -  -2.2  -3.72893   CAGGGCCGCATCAAA              TCGGCA GCTGG CGCCAA              TTCAGCCGGGCTGGG  50 27
    AHA_2563 2855749 .. 2855773 - -18.6  -5.14563   TTCCTCATGAAAAAA          GGGCCGCAGC ACCGG GCTGCGGCCC          CTTCCTATTCCACGC 100 48
    AHA_2560 NONE
    AHA_2559 NONE
    AHA_2558 NONE
    AHA_2557 NONE
    AHA_2556 2846896 .. 2846927 - -10.8  -2.87211   ACTCTTCTTGAGATA      GCCCCCTGACAGAA TATA TTCTGCCGGGGGGT       TATTTATTTCGCTGC  68 29
    AHA_2555 2844691 .. 2844707 - -15.1  -4.72272   CCCCGCCATCAAAAA              CCCCGGC CAG GCCGGGG              TAACAACACTGTGCT 100 62
    AHA_2551 2839616 .. 2839674 - -10.6  -5.45652   ACCGGCAAGAAAAAA TGAGCTATTAAAAAACGCGGCCCCTCTCGC TCA ACG-GAGGGGCCGCGTTCTTT--TAGC-CG CAGCACATAGATTCG 100 67
    AHA_2540 NONE
    AHA_2539 2826941 .. 2826976 - -20.8  -3.53224   TATGGCTGCGCCAAA    TTACAAAAAACCGACC ATCA GGTCGGTTTTTTGTAA     TTTGGCGGTGAGGGA 100 28
    AHA_2537 2825456 .. 2825470 -  -3.5  -4.37092   AGCGTTGGGATAAAA              GGC-GC CCCT GCTGCC               GAGTTCACGGAAGCT  64 30
    AHA_2526 NONE
    AHA_2525 NONE
    AHA_2524 NONE
        hybC NONE
        hybD NONE
    AHA_2521 2806904 .. 2806915 -  -2.2  -3.59979   GGCCCCTATTCTAAA                CCTG ATTG CAGA                 TGAGACCTAGCGCTG  47 32
    AHA_2520 2805187 .. 2805200 -  -2.3  -3.20723   GGTGGACGAACTTAA               CGGCA CGTC CACCG                CCAATCCTGCAGGTT  43 8
    AHA_2519 NONE
    AHA_2518 NONE
    AHA_2517 2802508 .. 2802522 -  -4.2  -3.84648   TCCAACATCAGGAAA               CCTCCG GCA CAGAGA               AGAGCGCGTTGAACT  58 3
    AHA_2516 2801556 .. 2801587 - -17.4  -4.43859   GATAACGGTAGAAAA      CAAGAGAGGGAGGC TGAT GCCTCCCTCTCTTT       TATCTGTGGACCTTG 100 297
    AHA_2496 2777690 .. 2777702 -  -5.5   -3.5125   TTGTTAACGAAAAAC                GGCTC GGC AAGCC                CGCTCACACCCGCGC  55 29
        fdhA 2775463 .. 2775502 -   -15  -2.62513   AGCTGAAAAAAGGAT  GAGCGGATCCGGGCCCTG TATA CAGAGCCTGGATCCACTT   TATTAACGACGATTA  83 38
    AHA_2494 2774956 .. 2774995 -  -3.5  -3.36991   CACCACGCCCAAATA  TGGCGTCACTAT-CGCCG TCATT CGCCGCATATCGCCGCCA  ACTGGCCCCTCCTCT  49 65
    AHA_2493 NONE
      fdhD-2 2771646 .. 2771662 -  -3.6  -2.82516   TGGCGCAGGACTATA              CCCGAG CCAAC CCCGAG              CGCCAATGGCCTTGT  43 45
        recR 2770862 .. 2770875 -  -9.5   -5.4833   TTACCCAACAAAAAA               CCCGC CGAG GCGGG                TTCTGGTATTGCTGC 100 104
        htpG 2768766 .. 2768789 - -14.6  -4.77173   GCGCCAGAAAAGAAA          GAGCCCACTG CACG CAGTGGGCCC           AAACATCATGCCTGG 100 31
         adk 2767825 .. 2767841 - -11.5   -4.2528   TCTGAATGCAAGAAA              GGGCCCA TGC CGGGCCC              TTGTCTCACTGGCAC  91 80
        hemH 2766772 .. 2766797 -  -7.6   -2.8785   CAATCAACGATCAGA         GCCCCGCACCA ATGGG TGATGCGGG-C         AATGCCCCGTCAGGC  56 35
    AHA_2487 2766304 .. 2766322 - -10.3  -5.54894   AACCCATCAAAAAAA             CCACCTC GCAAG GAGGTGG             TTTTTGCCGCGAACA 100 45
    AHA_2486 2764820 .. 2764837 - -12.7   -4.4009   TTTTACCTGACAAAA             CGCCTCC CGAA GGAGGCG              TTTCAGCGCAAGGGG 100 46
    AHA_2485 2764245 .. 2764266 - -10.9  -5.60993   CCGGCCATAAAAAAA           CCGACATCC TCGC GGATATCGG            TTCTCGTCAGACGGG 100 68
    AHA_2483 2763551 .. 2763561 -  -6.8  -3.29144   GCAGCTGGGTCAGAA                 GCAG CTG CTGC                 AGGGCATGTATGTGG  55 110
      glgC-1 2760527 .. 2760545 - -12.4   -5.0916   CGCTGAATAGAAAAA             GGGAGCCA TAT CGGCTCCC             TTTTTAGTTGTGGCG 100 60
    AHA_2479 NONE
        entE NONE
    AHA_2477 NONE
    AHA_2476 NONE
    AHA_2475 2749634 .. 2749659 -  -6.1  -3.49475   TCGACTGGGAGATAA         GCTGGCCCT TGTCGTTC AGCGCCAGC          TTCACCCCCTGCCGT  57 90
    AHA_2474 NONE
    AHA_2473 2741799 .. 2741822 - -15.3  -5.00884   ATCCTCGTCAAAAAA          GCCCCCGCA TCCAGG TGCGGGGGC           TTTTGTTATTTTGTT 100 69
    AHA_2463 2720762 .. 2720781 -   -15  -5.05601   CACCAGATAGAAAAA            GAGCCGGC AATT GCCGGCTC             TTTTTATTCACATCC 100 46
    AHA_2458 2714001 .. 2714030 - -14.3  -4.43877   CAATCCCCAAATAAA       GTGCGGCCCGAAC CGGG GTTCAGGCCGCAT        CTTGTGAGGGACATC 100 58
    AHA_2457 NONE
        dpiB NONE
    AHA_2455 2710420 .. 2710437 - -12.7  -4.39166   TCTTACACAGCAAAA             GAGCGCC GACA GGCGCTC              TTTTTATTGGCAAGA 100 62
        uvrB NONE
    AHA_2447 2700318 .. 2700336 -  -6.6  -3.33711   TACCCATAAAGTGAA             CGGCGTGG AGT CTACGCCA             ATGCATTGAGCGCCA  58 142
    AHA_2446 2699578 .. 2699600 - -17.8  -4.59944   AGCAGTACAAATAAA           GAAGGGAGCC AGC GGCTCCCTTC           TTTTTATGTCATTTT 100 67
    AHA_2443 2696282 .. 2696297 - -11.8  -5.67063   TCCACCATAAAAAAA              CGCGCC ATTT GGCGCG               TTTTTCTTGCATCAG 100 48
    AHA_2438 2687384 .. 2687401 - -12.7  -5.34555   CCAGACCATAAAAAA             CGCCCTC GAAT GAGGGCG              TTTTCAGTGCGGTGA 100 52
    AHA_2434 2681622 .. 2681645 - -16.8  -3.74381   ACGCAAGCCAAAAGA          GAAGGCGACC CTGG GGTCGCCTTC           GTTTTGTCTGCTATG 100 153
    AHA_2432 2680354 .. 2680389 - -15.6  -3.23464   AAAATAACTGAAAAT    TCAGCGCACATTGAAA ACGA TTTCAATGTGCGCCGT     TCATGAAAAGCAAAG 100 70
    AHA_2431 2677537 .. 2677553 - -15.1  -5.80951   ACGTAAAATAAAAAA              CCCCCGC ATG GCGGGGG              TCTGCTGGTTTACCG 100 46
    AHA_2428 2672304 .. 2672323 -   -15  -3.22448   GGAAACTCAATGCAA            TCGCCCCC GGCT GGGGGCGA             TACGAGGGGGTCATG  95 85
    AHA_2427 2670480 .. 2670508 -  -3.8  -2.99471   TCAGCGCCATACAGA        GTGAAGGCACTC TTGAT GAGTGGGCTCAC        AGGCTCTCCTCCACG  44 22
    AHA_2426 NONE
    AHA_2425 2668599 .. 2668621 - -13.5  -5.14563   CCCCTCATCAAAAAA           GAGGGAACC GCACG GGTTCCCTC           TGCTCATTCCTGTGG 100 48
    AHA_2424 2667996 .. 2668011 - -11.8  -3.61517   ACCTCGCTTGAATAA              GGGCGC CAAC GCGCCC               TTTGATATTCAGCTG  81 34
    AHA_2419 NONE
    AHA_2418 2662958 .. 2662987 - -10.7   -2.7263   ACCAGCCGGCCAAAG       GCCGGATCGGG TTGGTCGG CCCGATCCGGT        TTATCAGGGGCGAGT  66 29
      pdxY-2 2661458 .. 2661516 - -10.3  -3.18033   GAGAAGTGAGGAAGA GTGATCAGGGGGCCAAG-CAGAACGTGGA TCA TCCACGCCCAGACTTGTCCCCC-GATGGC GCGATCAGGCCAGCC  71 30
    AHA_2411 2656622 .. 2656672 - -13.4  -3.17723   GGATGGCGAATGCAA CGC-G-CAGC-CGGCCTTCCCCCGC CAGC ACGGGGGAAGGCCGAGTTATCAGCG GGTCTTGACCGCCTG  87 20
    AHA_2410 NONE
    AHA_2409 NONE
    AHA_2408 2655135 .. 2655148 -  -9.5  -5.55769   CGTCATAACAAAAAA               CCGCC CAAG GGCGG                TTTTTTTCATGATGG 100 32
    AHA_2405 2652104 .. 2652143 -   -18  -3.30006   AGCAAGGGAGATCAA  GCC-TTGTCAGCCGATGGG AGC CCCATCCGCCGACAACGGC  CATAAAAATTCCCGC 100 68
         ddl 2650941 .. 2650960 -   -15  -3.02013   ACCGCAACAACGACA            GAGGGGCC CGCA GGCCCCTC             TTCATCATTCAGCTC  91 61
    AHA_2402 2649539 .. 2649556 -  -3.4   -3.5393   ATCATCCCTGTGAAA             CGGC-TG GCAAG CATGCCG             GCTCCCTCACCCCCC  49 44
    AHA_2401 2648514 .. 2648551 - -20.8  -3.44229   AGCTGAGCATCACAA   CAC-AAGGGGCCCGATC TTGCG GATCGGGCCCCTTTGTG   TAGACAGCCATGACT 100 62
    AHA_2398 2645592 .. 2645606 -  -7.1  -3.34895   TGCAGGTTGAAGGAA               CGAGG CTCCC CCTCG               TTGCCAACCAATCTG  58 45
    AHA_2397 2643546 .. 2643559 -  -9.5  -2.63435   GCAAGGATTCAGAAC               GCGCC GATG GGCGC                CGGATGAAGGGGCCG  63 193
    AHA_2396 2642752 .. 2642777 - -21.9  -4.72272   TGCGGCCAGCAAAAA         GCCCACCCCGG GCAA CCGGGGTGGGC          TTTGTCATGACGCCA 100 46
    AHA_2394 2640360 .. 2640370 -  -5.4  -2.96695   TTGTTTATCAAACCA                 TTGC AAG GCAA                 TCCTGATACAAGAAC  49 46
    AHA_2393 2640155 .. 2640166 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGAT GCCC                 CTTGCTGTCTTCGTT  47 81
    AHA_2392 2639982 .. 2639993 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGTC  47 81
    AHA_2391 2639809 .. 2639820 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGAT GCCC                 CTTGCTGTCTTCGTC  47 81
    AHA_2390 2639630 .. 2639648 -  -2.4  -3.41051   GTACTGCCACCACAA             GAGACA GAGCAGT TGTCCC             TTGCTGTCTTCGTTT  45 80
    AHA_2389 2639463 .. 2639474 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGTT  47 81
    AHA_2388 2639289 .. 2639300 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGAT GCCC                 CTTGCTGTCTTCGTC  47 82
    AHA_2387 2639129 .. 2639140 -  -7.2  -3.67823   CACAAAGCAGAAAGA                CCGC GAAG GCGG                 CTGGATGAGAAGCTG  65 68
    AHA_2386 NONE
    AHA_2385 2636762 .. 2636785 - -16.8  -4.04474   ACAGCCGGATACAAA          CAAGGCAGCC CGTG GGCTGCCTTG           TTTTTTTCACCCCTT 100 65
    AHA_2380 2630422 .. 2630434 -  -3.3   -5.1861   GGTAGCATCAAAAAA                GGTGG CCT CAACC                GGTGGTTTTTTGCGC  79 20
    AHA_2379 NONE
    AHA_2378 NONE
        mukB 2623808 .. 2623836 - -16.1  -3.56643   GCCACAGTTTCCAAA        CAAAACGGGAGGC CAA GCCTCCCGTTTTC        ATACCTCGTCCGTCA 100 48
    AHA_2376 2623273 .. 2623285 -  -3.4  -2.52543   ACTCTGTTCAAGCCA                CTGA ACGAA TCAG                CGACTAGAGCGCCTC  40 29
    AHA_2375 2622807 .. 2622829 -  -9.8  -4.32034   GGAGCATGAGTAAAA           GCCGGGCC AGCCGTG GGCCCGAC           TAATTTAGGCGTGGC  86 30
    AHA_2374 NONE
         def 2621520 .. 2621542 -    -2  -2.72838   AGATAATCAAATGGA           TATGTAATGC GCC GCATGAAATA           TCACGTCATGTCGCC  39 31
    AHA_2372 NONE
    AHA_2371 NONE
    AHA_2370 NONE
    AHA_2369 2618883 .. 2618900 - -14.1  -4.84311   TCGCAGACAACAAAA             GCGCGGC TCTG GCCGCGC              GTTGAACGTTCCGGG 100 55
    AHA_2368 2617520 .. 2617549 - -13.7  -4.03234   TTGCCCCGACATAAA       GTAAAAAACCGCC AGCT GGCGGTTTTTTTC        ATTGTCTGACGATCA 100 38
    AHA_2364 2613403 .. 2613419 -  -9.4  -4.73912   AGAAAAATGAGAAAA              GAGCGG TCACG CCGCTC              TTTCAACGACACGAT  93 114
    AHA_2363 2611664 .. 2611685 - -11.6  -4.28254   GCCGAATATCGAAAA           GGGGGACA ACAATA TGTCCCCC            GACTTGGCAAGAGAG  91 83
    AHA_2362 2610891 .. 2610918 -  -6.8  -4.46212   GCCCCCATCACAAAA        CCGGCTGCGGGA TGGC TCACGAGGCCGG         CAGCCAGCGCTCCTG  75 14
    AHA_2361 NONE
    AHA_2360 2609472 .. 2609489 -  -9.1  -3.16191   TCACAGTTGCATCAA             CTCGGCG CAGG CACCGAG              GTGCCGCTCACCATC  61 229
    AHA_2358 2607666 .. 2607685 - -10.7  -5.67967   AGCAGCATAAAAAAA            CCACCGC GACCTG GCGGTGG             TTTTTTTATGGGCGC 100 52
    AHA_2356 NONE
        aroC 2604914 .. 2604931 - -12.7  -4.73388   AAGGCCCATGAAAAA             GGCGACC CTGA GGTCGCC              TTTTGACTGTGTCTG 100 81
    AHA_2353 2602285 .. 2602305 - -18.3  -4.60797   CCCGGATATAGAAAA            GCCCCGCCA GAG TGGCGGGGC            TTTTTACATCAACCG 100 67
    AHA_2348 NONE
    AHA_2347 NONE
        fruA 2594236 .. 2594251 - -11.8   -5.4505   GTGGGCAATAAAAAA              GCGGCC CAAA GGCCGC               TCTCTTGTATGGCGT 100 57
    AHA_2345 2593399 .. 2593431 -    -9  -4.09243   GAGATCGGCCGAAAA      GCCGGCGAGCTGCT GCTTG AGCGGATGGCCGGC      AACGACGAACCCGCC  76 119
    AHA_2343 NONE
    AHA_2342 NONE
    AHA_2341 NONE
    AHA_2340 NONE
    AHA_2339 2587862 .. 2587880 - -14.6  -4.85599   CCCAGCCCATAAAAA             GGGAGAGC CCT GCTCTCCC             CTGTCTGTGCTCACC 100 57
    AHA_2338 2586458 .. 2586487 -  -2.8  -3.99494   CGAAGTGAACAACAA       GGGCTACTGCAAG GGGTG CCTGC-GCAGCCG       CGAGGAACGCTTCAA  58 207
        mltA 2585004 .. 2585025 - -17.3  -5.33405   GTCAGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTACATCCATC 100 91
        gyrA 2576213 .. 2576232 -   -15  -4.43477   GCGAGCCAATGAAAA            GAGCGGCC ATGA GGCCGCTC             TTTGGTATCGGGTAA 100 51
    AHA_2328 2573712 .. 2573722 -  -2.4  -2.87132   GTGTTTCCTTATACA                 GTGG TGC CCCC                 TACCAAAGGGCACAT  40 233
        thrS NONE
        infC 2571158 .. 2571168 -  -6.8  -4.79352   TGAGTGACAACAAAA                 TCGC AAG GCGA                 ACCGACTCATGGGAC  81 70
        rpmI NONE
        rplT 2570516 .. 2570531 - -10.4  -5.62045   ACAGACAACAAAAAA              GGAGGC CTAG GCCTCC               TTTTAGCATTTATAA 100 51
        pheS NONE
        pheT 2566852 .. 2566862 -  -3.2    -3.322   AGCGCCATAGATCAA                 TCCC TCA AGGA                 TGCATTCAACTCTTC  47 11
        ihfA 2566519 .. 2566546 - -12.8  -5.14563   TTTCTCATGAAAAAA        TAAAAGCCAGGC GGTT GCCTGGCTTTTT         GTCACTCGTTGGGCT 100 27
    AHA_2320 NONE
    AHA_2319 2561269 .. 2561303 -  -7.7  -2.78384   CCGGTGGCCAGCAGA     GGTAGCGGGCCACCG TCTAC CAGCGCCCCGCCACG     CCCTGATCGCGCCAC  55 7
    AHA_2318 NONE
    AHA_2317 2559822 .. 2559836 -  -3.4  -3.22475   TCCAGTCGCACAATA               GCTCAG GGA CCGCGC               ATCTCCATCCAGTTG  45 13
    AHA_2316 2559262 .. 2559274 -  -3.4  -3.16191   GGATAGCCCCATCAA                TCGA CGATC TCGA                TGCGGGTCACCTGCC  45 9
    AHA_2315 2557541 .. 2557571 - -17.7  -4.65078   ATACCTGCAATAAAA      GC-GCAAGGCGACC CTGG GGTCGCCTTGCTGC       ATTTTGTCTCTGGCC 100 63
    AHA_2307 NONE
    AHA_2306 2548999 .. 2549015 - -13.7  -4.81083   CTCAACCATGAAAAA              GGAGCGC CTG GCGCTCC              TTTTTTATTTTTATG 100 72
    AHA_2294 2537948 .. 2537973 -    -4  -3.29511   TTCACTCCCTGATAA         TCAGTGCAAGG TAACG CCCCGC-CTGA         AAAATTCAAATCAAT  47 83
    AHA_2293 2537385 .. 2537404 -    -7  -4.03234   TGGCTTTCATATAAA            CGCGCGGG CACA CCCGAGCA             CAACAAAGGCCCCAT  68 83
        proQ NONE
         prc 2534654 .. 2534671 - -12.7  -4.68908   TTCAGGCAAAAGAAA             GGGCGAC TTCA GTCGCCC              TTGTTGATTAATTGA 100 52
        pepN 2531907 .. 2531930 - -14.6  -3.53012   GCCCGGGTGTTGAAA          GGGTGGGAGA TGGC TCCCCCACCC           CGTCGGGTTTACTGC  95 34
    AHA_2289 2531538 .. 2531556 -  -7.5  -4.59853   TTAAGCTGTGAAAAA             TTTTGCC GTTCT GGCAAAA             AACAGAAAATCCCAC  83 114
    AHA_2288 2526470 .. 2526490 - -15.4  -5.40072   TGCTCCTTAAAAAAA            GCCCCGGC AACTG GCCGGGGC            TTTGGGTGTGATACC 100 63
        pyrD 2525373 .. 2525385 -  -4.8  -3.64703   GTGCCCTTACTGAAA                GTCG TTACT CGAC                TTTATTCCATGTCGA  55 81
    AHA_2286 2524600 .. 2524619 -  -2.1  -3.11182   TTTCAAGAGAAACTA            CAGGATT TAGAAT AACCCCG             TGTTGTTGATACAAC  42 223
        rlmL NONE
    AHA_2284 2521672 .. 2521697 -  -6.1  -5.26875   TTGCTAATGAAAAAA         CGGGTGGCAGAC TGG ATCTCCC-CCCG         TTTCATCGTCAAATC  90 47
         uup NONE
    AHA_2282 2517945 .. 2517967 -  -9.9   -5.7946   CGTGGAACAAAAAAA           GCGACCAAT TTTTC ATCGGTCGC           TTTCATCTTTACCCC 100 134
    AHA_2281 2517688 .. 2517704 - -13.7   -3.8579   ACTGAACAACGTAAA              GGGGCCA TCA TGGCCCC              TTTCCTTTTGCAATG  93 57
    AHA_2276 2511862 .. 2511893 - -13.8   -4.7497   CTGAGGTAGCAAAAA      CGGAAAGGGCCTGA GCAA TCAGGCCCTTTTCA       TTTGCGGCTGCGGGC 100 12
    AHA_2274 2508970 .. 2508995 - -12.6  -4.18018   CCTTCTCATGCAAAA         CCGGCCCA-GC AGAGG GCATGGGCCGG         TGGATCATTACGCAA  95 63
    AHA_2273 NONE
    AHA_2272 2507100 .. 2507115 -    -4  -3.37257   ACACAATCAAATACA              CGATGCT GTC AGC-TCG              CCGTGGCGGCGGGCT  49 18
    AHA_2271 2506207 .. 2506255 -  -4.6   -5.7946   CCTGCAAGAAAAAAA GTGAAAAAGAAAAGAGGCCAACC CGGA GGTTGGCCTCTTT-CATTGCGGC AGTGGCACCTTACTC 100 35
    AHA_2268 2503075 .. 2503092 - -14.1  -4.62475   AGCCATAAACGAAAA             GCGGGCC ACTC GGCCCGC              TTTGTCATGTCTGCC 100 57
    AHA_2264 NONE
    AHA_2263 NONE
        yebU 2493735 .. 2493761 - -11.6  -5.67063   GCGAGCATAAAAAAA         GCCAGGTACGAA TTC CTTGTACCTGGC         ATAGGGGAATTGGCT 100 164
    AHA_2260 2493121 .. 2493140 -  -4.3  -3.53811   GTCACTGCCGGCAAA            CCGATGA ACAAAA TCATCGA             GGTCACCCGTCACAA  53 277
       maf-2 2477518 .. 2477549 - -18.2    -4.258   TGACCGATGAATAAA      CGAAAAACGGGAGC CTTG GCTCCCGTTTTTCA       TGGCTGACATGCCGC 100 46
    AHA_2239 2472327 .. 2472347 - -15.5  -5.81412   CGCACCTAAAAAAAA            GAGCCACAC AAT GTGTGGCTC            TTTTTGTCAGACTAG 100 48
    AHA_2237 2469719 .. 2469735 - -15.1   -3.6543   CAATGTGTTAAAAGA              GGGCGCC GAT GGCGCCC              TTCTCCATTTGCTTC  95 1
        metG 2464932 .. 2464950 -   -16  -4.92385   CATAGCCAAATAAAA             GGGAGGCC TCA GGCCTCCC             TCGTTGCTTGATGAC 100 51
    AHA_2231 2463052 .. 2463072 -   -14  -3.99062   AACAGCCATGAGAAA            CGGGAGCC ACACA GGCTCCCG            TTTGCATCGATAGCA 100 49
    AHA_2229 2461185 .. 2461217 - -20.7  -3.58269   GAATTGATGCTGAAA      CAACAGAGGCCGTCC TAT GGATGGCCTCTGTTG      TTTGGCGGTACGTTA 100 38
    AHA_2227 2457920 .. 2457938 -  -8.8  -5.60993   GGCTGCATAAAAAAA             GCCCGC TTTGATC GCGGGC             TTTTTGATGGCTTGC 100 104
    AHA_2225 2455379 .. 2455411 - -13.3  -3.08464   TCATGACGCAGGCAA      GGCTCTCCCCCGGCG CAG CCCCGAAGGCGAGCC      ATGCTGCCATCGGGG  84 60
        selD NONE
    AHA_2223 NONE
    AHA_2221 2452023 .. 2452041 -  -2.3  -3.96327   ACCCTGCAGGAGAAA             CCGGCGA AGGGA TCCCCGA             GGCGTCGCGGATCGT  54 238
    AHA_2213 2438017 .. 2438046 - -20.9  -2.66316   GGCGTGACCAGACGA       CACCGCGGATACA GAGA TGTATCCGCGGTG        TTTTTTTATCCGGTT 100 122
    AHA_2208 NONE
    AHA_2207 2432076 .. 2432095 - -12.2  -2.78816   CCAGCCCGTAGGAGA            GGATGCAC GGAC GTGCATCC             CTCAGAGTTCGTGGG  72 27
    AHA_2206 2431213 .. 2431229 - -15.1  -5.84432   CACAAGATAAAAAAA              GGGGCCC TCG GGGCCCC              TTTTTTTGTCGGCGT 100 40
        hisG NONE
        hisD NONE
        hisC NONE
    AHA_2193 2418784 .. 2418798 -  -4.9  -2.67143   ACATCCATCACAGCA               CCCCC TTGCT GGAGG               GAAGCTCGCTCCCTT  44 3
        hisH NONE
        hisA 2417312 .. 2417346 - -17.8  -3.14564   TTACCCCTTGATGAA     GAGGCTTCCGGCCGGA CGG CCCGGCAGGGAGCCTC     TCTCTCAATCGACGT 100 65
    AHA_2190 NONE
    AHA_2189 2413957 .. 2413990 -  -2.9  -3.12505   ATGCCACAGTGAAGA     CCAGCGCGTCATAGG GACT CCTCCGGCGGGGTGG      GGGCCTGCGGATAGG  43 0
    AHA_2188 2409938 .. 2409956 -  -2.2  -4.59773   CCTGAGCGGGAAAAA             GAGACCCG AAA CGGGCGGC             GTCTTCACTCGGTGG  65 66
        hisF NONE
    AHA_2186 2408376 .. 2408403 - -16.4  -2.73364   GTGTCATTTGAATGA        GCTTAACGGGCC AAAT AGCCCGTTAAGC         AATATGATACTTTAT  90 37
    AHA_2183 2402737 .. 2402753 - -10.8   -3.5518   CCAAGATGGATACAA              CCGGCC GTGCA GGCCGG              CATCATCACCCAGGA  73 230
    AHA_2181 2401546 .. 2401561 - -11.8  -4.92757   TGAGCAATAAGAAAA              GGGGCC TGCG GGCCCC               TTTCTGTTGTCAGCC 100 125
    AHA_2168 NONE
    AHA_2167 2377379 .. 2377401 - -20.6  -5.65496   CAGCAAAAATAAAAA           GGGCCCGCCA TCA TGGCGGGCCC           TTCTGGTTTTAAGAA 100 48
    AHA_2158 2364947 .. 2364980 - -11.9  -4.09511   AACACTTGGCTAAAA     GTGAAGTGCTGTCATG TTG CA-GATAGCACTTCAC     TGAAGACTGCAGGTC  91 47
    AHA_2152 NONE
    AHA_2151 2356196 .. 2356213 -  -6.9  -4.38203   CAGAGAATCAAGAAA             GACGAGC CAGG GCGCGTC              CTGCAATGCGGCCGC  75 328
    AHA_2150 NONE
    AHA_2149 2353435 .. 2353445 -  -4.6  -3.04322   GGCAAGGGGCGAAGA                 GGCG GCT CACC                 AGGGATCCTCTCCTT  47 21
    AHA_2148 2351916 .. 2351939 - -16.8  -3.35813   CCTTATTTGAATGAA          GGCCAGGATC AACC GATCCTGGCC           ATTTGCCTGAGGCCA 100 10
    AHA_2147 NONE
    AHA_2146 2350490 .. 2350517 - -12.8  -4.17516   GGGAAAGGAGATAAA        CGGGCAG-CCAAC CTG ATTGGTCTGCCCG        TTGGCTTGATCCGCT  95 72
    AHA_2145 2348819 .. 2348836 - -12.7  -5.60993   TTCGGGATAAAAAAA             GAGCGCC CGTA GGCGCTC              TGGTCAATTCGCTGA 100 44
    AHA_2144 NONE
    AHA_2142 2345708 .. 2345719 -  -7.2  -2.60194   ATCGGGGCAATCAAG                GGCC TGCT GGCC                 AAGGTGGGTTGGCGG  51 298
    AHA_2141 2344273 .. 2344288 - -11.8  -3.81414   AGTTGCAATGAACAA              GGGGCC CGCA GGCCCC               TTTCTTTATGTTTGT  86 52
    AHA_2139 2342407 .. 2342428 - -11.5  -4.32678   GCGCCAAATAAAGAA           GGAGCGGCC CGGG GGCTGCTCC            TTTGTGCGTGTTCAG  91 59
      sdaA-2 2340825 .. 2340843 -   -11  -4.82901   GTTTGCCCATAAAAA             TACCCGAC AAT GCCGGGTA             TTTAGGAACCAAATG 100 58
      sdaA-1 2339182 .. 2339211 - -15.9  -3.17725   CCAAACGACAGGCAA       TAAAAACGGCGGG AATG CCCGCCATTTTTA        TTGTTGCCACGCCGA 100 42
        minC NONE
        minD NONE
        minE 2335781 .. 2335803 - -17.8   -5.7946   GTGGCAATAAAAAAA           CCGGATCCTG GCA CAGGATCCGG           TCTTCATTGGGGGAA 100 64
    AHA_2131 NONE
        mtgA 2334528 .. 2334561 -  -8.1  -2.62184   CCCGCCGGCAGACGA    CCCGGCCGCC--GGC AGTTGA GCCTTGGCGGCCGGC     TGGTCAATCGGCCTG  56 29
    AHA_2129 2333924 .. 2333938 - -12.8  -4.51238   TGCAGAAAAGAGAAA               GGCGCC GAG GGCGCC               TTTTTTATGCCTGTT 100 30
    AHA_2125 2331226 .. 2331241 -  -4.6   -4.0942   CATGCACCAGAGAAA              TGTGCG GTTG CGCACG               TCATCCGCCGCAACC  62 74
    AHA_2124 NONE
    AHA_2123 2330356 .. 2330379 -  -8.2  -2.78384   CCGCGGTCTATGACA          GCAAGATGTA TCCG TACCTCTTGC           CGCAGGTCAGTTGAC  57 112
    AHA_2122 2330058 .. 2330087 - -16.5  -2.94365   CCAGACGTCAGAAAG       CGACAACGCAGCC CTCG GGCTGCGTTGTCT        GTTTTGGGGCCTTGT  93 61
    AHA_2120 2328304 .. 2328324 - -13.3  -5.41143   TAGCGGGCAAAAAAA            GAGGCACGC ATG GCGTACCTC            AGGAAACGGATTTGT 100 24
        purT 2326990 .. 2327007 - -11.3  -4.27316   CGCCTCAATGCAAAA             GGGGCAT TGCC ATGCCCC              TTGCGCCGGATCACG  91 77
    AHA_2118 2326238 .. 2326266 -  -2.4  -2.56715   ACCGGGATCAAGGGA       GGCAGGAG--GTCA GTC CGACAGCACCTGCC       TGTTGTTTACTTGAC  38 32
    AHA_2117 2325879 .. 2325899 - -16.9  -4.52857   ATTTGCCATAGAAAA            GGGCCTGCA TCA TGCAGGCCC            TTGGCTATCTGGTGG 100 57
    AHA_2115 2324794 .. 2324827 - -16.9  -3.04144   CGGGTAGCGGGAAGA     GC-CTTTGCACTCCCG AAA CGGGAATGCAAAGTGC     GGGGGGGTCATTCTA 100 85
    AHA_2114 2323237 .. 2323249 -  -9.1  -2.78463   ACCCGTTTCACCACA                CCAGC ACT GCTGG                CGTGGTCGGCATACT  60 137
    AHA_2113 NONE
    AHA_2112 NONE
    AHA_2111 2322893 .. 2322919 -  -5.2  -2.60244   GTTCTAACCAACTGA         GCTATAAGCCTG TAT CAAACTTATATC         TGCAATATATTCAAA  46 47
    AHA_2110 2322806 .. 2322820 -  -2.8  -2.60194   AGTGCTCTAACCAAC               TGAGCT ATA AACCCA               CATCTGTGTTCAATT  40 30
    AHA_2109 2322703 .. 2322713 -  -6.8  -2.75382   CAGCTGAGCTAAGGA                 CGCA GGG TGCG                 CAAGGCGACTTTATC  52 55
    AHA_2108 2322600 .. 2322618 -   -16  -4.81249   GGGGAAATGCAAAAA             GCCCGCTC GAG GAGCGGGC             TTTGCTAATCTGGTG 100 36
    AHA_2106 NONE
    AHA_2105 NONE
    AHA_2104 2317363 .. 2317379 -  -9.4  -4.20516   TGGTCAGTGAACAAA              GAGCGC TTGTG GCGCTC              TTTTTTATTGTCCGC  80 30
    AHA_2099 2311822 .. 2311845 - -16.8  -4.05714   AGGCTGAATGACAAA          GAGGGAGAGC CTGG GCTCTCCCTC           TTCTATTGCTGTTGA 100 95
    AHA_2095 2307773 .. 2307784 -  -5.8  -3.14132   GGCTTTTTGCAGCAA                CTGG CCAG CCAG                 AGCCGGGTCGATGTG  51 173
    AHA_2093 2305734 .. 2305753 -   -10  -3.18274   GCGATCGTAATTGAA            GAGTGACC AGAT GGTCACCC             CCAGAAAGGAGACCA  68 80
    AHA_2092 2303793 .. 2303826 - -12.3  -2.53715   CTGAGCAGTAGTAAT     TCGACAGGCTCCGCC CACC GGCGGGGCCTGTTGT      TTTTGGTGTGAAGGA  71 82
    AHA_2090 2300859 .. 2300875 -  -2.9  -3.93673   GAAAGAGGTGACAAA              CCCAGAC TAT GTCTTGA              GCTGGTGGAGCGAGA  56 457
    AHA_2087 2297260 .. 2297278 -  -8.9  -2.70498   CATACCCGAGACAAG             CCTTGTG CTTTC CACAAGG             TGACCCAGTTGTCGG  60 446
    AHA_2078 NONE
    AHA_2077 NONE
    AHA_2076 NONE
    AHA_2075 NONE
    AHA_2074 NONE
    AHA_2073 NONE
    AHA_2072 NONE
    AHA_2071 2276410 .. 2276465 -   -17  -2.67515   GCCAGGAGGATACGA GCGTGCCACGTGCAGGATGAGAGGGAT GGC ATCCCCCTCATCCTGCTGATGTCA-GC GGCTCAATCGTCCAG  90 29
    AHA_2070 2275139 .. 2275156 - -12.7  -5.06414   CGCGCCCAACAAAAA             GGCACCC TGCG GGGTGCC              TTTTTCGTGACAGCT 100 56
    AHA_2067 2271983 .. 2272000 - -11.3   -5.5454   TTAAATAAATAAAAA             TGGCAGC CTCG GCTGCCA              TTTTTGTTGGAGAGT 100 50
    AHA_2066 NONE
    AHA_2065 2270948 .. 2270968 -  -2.6   -4.7254   AGTGGCGACGAAAAA           CACCACCAA GCAT TCGGTG-TG            TTGTTCATACCCACT  68 30
    AHA_2064 2270147 .. 2270163 -  -2.1  -3.09718   GAACTTCCAAAACCA              GGGTTTG GAA CTCACCC              AGATTTTAAATCTGT  42 115
    AHA_2063 NONE
    AHA_2062 2266636 .. 2266649 -  -3.1  -4.33621   CATGCAATCAATAAA               CGTAA TCAT CTACG                ACTATTTCTTGCTCA  62 96
    AHA_2059 NONE
    AHA_2058 2262339 .. 2262352 -  -2.3  -3.34895   TCGACGGTGAATGAA               GGGAG GTCC CTACC                GAGCAGCAGGGCTGC  45 82
    AHA_2057 NONE
        actP 2260297 .. 2260314 - -14.1  -5.21709   CTCGACATGAAAAAA             GCCGGCC CTGG GGCCGGC              TTGCAACCGTCAATC 100 47
    AHA_2051 2254200 .. 2254213 -  -3.8  -3.14881   CAAGGCCTGCATCAA               GGTG CCTCTC CACC                AGTATGAGTTCGATG  47 300
        umuD 2250254 .. 2250285 -  -2.2  -2.63382   GTTCACATCTACAAG      GGCAATGGCTGTAGG CAT CGTTCAGCC-TTGCT      TGGTCTTGTGGATCA  38 15
        umuC NONE
    AHA_2043 2248181 .. 2248205 - -10.7  -3.05022   CCGGGCAGATATAGA          TTTCGGGGGCT TGG AACCCCCGAAC          CATTATGCTGTTTTA  69 28
    AHA_2034 2241279 .. 2241290 -    -3  -3.54129   GATATTCCGTGTAAA                TCAT TGGC ATGA                 TATAGAATGAACCAT  49 406
    AHA_2031 2237910 .. 2237921 -  -2.2  -4.28774   CCACCCAATTTAAAA                CCAC AATC GTGA                 ATTTTAACAATGTAT  60 69
    AHA_2030 2236982 .. 2237003 - -11.6  -3.52316   TTGATAGAGAAGGAA           GCACCGGT ATTACA ACCGGTGC            ATATAAAGTTTAGGT  77 183
    AHA_2029 2235987 .. 2236005 -  -4.5  -3.72989   AAAGTGATATGGAAA             GACGCCA TCTCC TGGAGTC             ACTTCGTTTATCAAT  55 319
    AHA_2025 2232443 .. 2232458 - -11.8  -5.60689   GTAGATAAGAAAAAA              CCCGCC AACT GGCGGG               TTTATGCATGAGTAG 100 52
    AHA_2024 2232025 .. 2232040 -  -3.2  -3.03159   TCAACCGGTTGAACA              CTGAGC CAAT GCTCAT               GCGGTTGAGTGCTCC  43 63
    AHA_2023 2229780 .. 2229790 -  -5.4  -3.12351   CTGCTTTATATGTAA                 TGCT TGA AGCA                 GAATTTGTTCATTGA  50 229
    AHA_2022 2228660 .. 2228671 -  -5.8  -2.74605   TGCCGTCAAAAGCCA                GCGA ATAT TCGC                 TCAAGCTCATCATCG  50 498
    AHA_2021 NONE
    AHA_2020 2226025 .. 2226039 -  -2.8  -3.64609   CACAACCACTGGAAA               GGGT TGCGGTT ACCC               TTACACCACAGTCTT  51 488
    AHA_2019 2225406 .. 2225423 -  -9.8   -3.9392   GTTGAGTTGAAAGAA             GGGCCG TGATTT CGGCCC              CCAGCTCAGGGGTCG  80 56
    AHA_2018 2224831 .. 2224843 -  -4.8  -3.07443   CGATACTGTAGCGAA                CCTG TCCAT CAGG                GCCATACATCCAGAT  47 127
    AHA_2017 2223516 .. 2223527 -  -4.4  -3.21099   TTCCTTGATTATCAA                TGCA TTAC TGCA                 TTGGTTGAAAACTCT  49 170
    AHA_2016 2221844 .. 2221861 - -12.7  -5.64274   GCAGGCATAAAAAAA             CCGGCAC TGAG GTGCCGG              TTTTCATTGACGGGA 100 58
    AHA_2009 2212245 .. 2212264 - -13.6  -4.87291   GATGGCAATGAAAAA            GGGCAGAC CCTA GTCTGCCC             TTTTTTGCGGCTGGC 100 51
    AHA_2008 2211570 .. 2211605 - -24.8  -4.82901   GTTTGCTGATAAAAA    CGAAGGGCCCGCCGGT GCAA ACCGGCGGGCCCTTCC     GTTTGGGGTATCTGG 100 46
    AHA_2004 NONE
         mfd 2204098 .. 2204128 - -19.9  -3.11339   ACCAGCCAACATAGA       CAAAACGGGAGCC ATCAA GGCTCCCGTTTTG       TTTGGGCGAGCGGCA 100 61
    AHA_2001 2200847 .. 2200864 - -12.7  -5.28778   ACGAGTGAGAAAAAA             GACCGCC GAAA GGCGGTC              TTTTTGTCTGCGGGG 100 50
    AHA_1997 2195965 .. 2195975 -  -6.8  -3.85389   CTGCAAGAAGGGAAA                 CAGG CGG CCTG                 ATCAGGCCTCGAAGG  65 27
    AHA_1994 2192370 .. 2192381 -  -2.2  -2.57211   ATGGGGTGCGACAAG                GTCA TGTG CGAC                 AAATAGATACCCCAC  38 15
    AHA_1993 2191353 .. 2191369 -    -5  -5.24551   CCAAAGCAACAAAAA              GGGGCG ATCTG CGTCCC              GACTCTGCTAATGCC  90 148
    AHA_1988 2183410 .. 2183440 -  -4.6  -3.97307   CGCAGGCAATAAGAA      GCCGGACCGGGCA GTGGCG TTCCCGG-CTGGC       AACGGGTTGAGCGGT  60 82
      tonB-1 NONE
    AHA_1986 NONE
    AHA_1985 2181187 .. 2181204 -  -2.6  -3.31792   GCATGATGCCGACAA             GGTGCC TGTGCT GGCAAC              TGCCTGGATGGCAGC  45 86
    AHA_1984 2180158 .. 2180170 -  -7.7  -2.53876   CGCCATCTTAACGCA                GTTCG GGG CGAAC                GCCGAGCGGCGCTGG  53 52
        xseA 2178692 .. 2178720 -  -9.5  -4.08111   CAAAGAGATGAGAAA        CAAGGGGGGGCAC CTG ATGTGCCCCCTTG        TTCGTTATGGCTGGT  83 30
    AHA_1981 2175384 .. 2175402 -   -16  -5.29716   GCAAGACAATAAAAA             GCGCGACC TCG GGTCGCGC             TTTTTTGTTGGAGCG 100 48
    AHA_1975 NONE
    AHA_1974 2167430 .. 2167454 -  -5.5  -5.40072   GTTCGCTCAAAAAAA          CAGCGAGGTCG GAG CAGCCACGCCG          ACCTCGAAACGGGTG  95 221
        corA 2166235 .. 2166255 - -14.7  -3.35813   GGGGACGGGAATTAA            TCGGGGGGC CAT GCCCCCCAA            TCCGCTTATCTCTTT  95 60
    AHA_1972 2165443 .. 2165481 - -13.1  -3.21747   GCAGGGCACCATCAA  CCGGGGGCAGAGCGCCAC CGAG GTGA-GCGGTGCCCCCGG   TCAGTGGCTGACGGT  73 219
    AHA_1970 NONE
    AHA_1969 2161323 .. 2161342 -   -15  -4.57533   AATAACAGCAGAAAA            GGGAGCCC TGAC GGGCTCCC             TGCGGGGTTTACAGC 100 34
    AHA_1968 NONE
    AHA_1967 NONE
    AHA_1966 2158300 .. 2158335 - -17.8  -3.58726   CGCGCCGAGACACAA    GCATCAAAAAACCGCC TTTC GGCGGTTTTTTGATGG     GGCTCAGGCCGGTTG 100 29
    AHA_1964 2156375 .. 2156396 - -15.9   -5.5208   TCACAACATAAAAAA           GAAGCCCGC ATAT GCGGGCTTC            TTTGTGGGCGCTGAT 100 50
    AHA_1962 NONE
    AHA_1961 2151333 .. 2151355 - -17.8  -4.17048   CTGCGGTCAAAACAA           GAGGGAGTGC CAG GCACTCCCTC           TTTGGGGTGAAACGG 100 61
    AHA_1959 2148464 .. 2148479 - -11.8  -5.26316   TCAGTCCATAAAAAA              GGCCCC TCGC GGGGCC               TTTTTGTTGTCAGCG 100 48
    AHA_1957 2145879 .. 2145902 - -16.8  -2.66452   ACGGGCATAACGAAC          GAGGGAAGGC GCAA GCCTTCCCTC           TTTTTTTGTTGGTTG  89 48
        metR 2142451 .. 2142466 - -11.8  -3.40403   CCTGTGTGATGACAA              GCCGCC TTAA GGCGGC               TTTTTACTGCGCCTT  80 29
    AHA_1951 2137223 .. 2137246 - -18.2  -4.53349   CAAGGATCAAACAAA          GAGGGCAGCC CGCA GGCTGCCCTC           TGTCGATGCAATGCT 100 60
    AHA_1949 2135447 .. 2135464 - -12.7  -4.73448   ACAGAGATGCAAAAA             GGGAGGC TGAT GCCTCCC              TTTGTGTGACGGACG 100 71
    AHA_1948 2133941 .. 2133954 -  -9.5  -3.05844   TGTGTCATCTGAAGA               GGCGC CGTG GCGCC                CCCCGTCTATTAGGT  67 50
    AHA_1947 2132665 .. 2132693 - -14.5   -4.4078   TTGCCGCAAGCAAAA        CAGCCTGCCCCTT GGC AGGGGGCGGGCTG        TTTTTTTGCGCTCAA 100 55
    AHA_1944 2127427 .. 2127442 - -11.8  -5.08824   TTGGCAGGCAAAAAA              CGGGGC CCAT GCCCCG               TTTTGCTCTCCATTC 100 60
    AHA_1943 2125556 .. 2125572 - -10.8  -4.63479   GACCATAAAGCAAAA              GGGGCC ATCAG GGCCCC              TTCACATACTACCAC  95 42
    AHA_1942 NONE
        pflB 2121993 .. 2122010 - -14.1  -5.64274   TCAGGCATAAAAAAA             CCGGCGC CTTG GCGCCGG              TTTTTGTTCACCGAG 100 47
    AHA_1937 NONE
    AHA_1936 2116351 .. 2116382 - -16.8  -3.33815   ACCTTCGGCAATGAA      TTGTGCGATGGCGAC GTG GT-GCCATCGCACAA      ACCAGCCTTCAGCGG 100 43
    AHA_1935 NONE
    AHA_1934 NONE
    AHA_1933 2111787 .. 2111828 - -14.6   -3.2794   CGCGAGCCATACCAA CTGCGAAGGGGCAGGGGAGT CATC ACTCTCCTGCCCCTTCG--G CTTTCTGGCTCCTTC  95 60
        gltA 2098116 .. 2098132 - -13.7  -5.27938   AGCGGCAAATAAAAA              GGCGGTC AAT GACCGCC              TTTGTAACAAAAAAT 100 55
    AHA_1921 2097100 .. 2097115 - -11.8  -5.44721   ATGAGTCGAAAAAAA              GGCGCC GCAA GGCGCC               TTTTTCATTGGGTGA 100 44
        mnmC 2093699 .. 2093718 -   -15  -5.10461   TTGAGCGAACAAAAA            GGGCTCCC GTCG GGGAGCCC             TTTTTGTTGTTGCGT 100 61
        dcuC 2091312 .. 2091336 - -18.6  -2.87132   TGGCGGGGGGAGATA          CCAGCCCGGC GGCAG GCCGGGCTGG          TAGAGTGAGGGAGAG 100 73
    AHA_1916 2089547 .. 2089601 - -14.6  -4.36914   CGTTTTCTGACAAAA CCGGCTAAAGCGACCTGGCGGGCCA TCGCCAAG TGGCCCGCCAGATC-CTT-A-CCGG GTAGACGGCCCCTGA 100 19
    AHA_1915 2087713 .. 2087738 - -19.1   -4.4078   TTGGCGCAATGAAAA         GGGCCGTCATC ACGG GATGACGGCCC          TGTTCGGTCAAGGGG 100 43
    AHA_1914 NONE
    AHA_1913 2086179 .. 2086195 - -13.7   -5.4505   TTGCCGAACAAAAAA              CGCAGCC CAA GGCTGCG              TTTTTTGTTGCTGCT 100 96
       rpmE2 NONE
        rpmJ 2085192 .. 2085215 - -16.8  -2.70354   GGCGTGATAAATGGA          CAAGGCCCTC GCAT GAGGGCCTTG           TTTTTATGAGGCTGC  89 44
    AHA_1908 NONE
    AHA_1907 2083143 .. 2083164 -    -8  -2.71712   CGGGTGTTTCGAAAG           CGGGTGGGG GTGAG CCCCACC-G           AATACCGCAAGTGCG  52 149
        araB NONE
        araD NONE
        araA NONE
    AHA_1899 2072591 .. 2072615 -  -4.2  -3.09015   CGTACAGTCATTTAA          CCGTGAGGCG GGTCA CATCTCACAG          ATTTTCGAGGTAGTG  47 20
    AHA_1898 2071892 .. 2071921 -  -9.3  -2.70932   GCGGGCTGGCAATCA       TGATTCAGGCTCC CACG GGAGCCTGAATGT        ATTGCGAAAGGCGCT  60 53
    AHA_1896 NONE
    AHA_1895 2068908 .. 2068925 -    -7  -2.71712   TTGTCTTGTGCAAAT             TGTGCG GCAGGT CGCACA              TCGGCGGGCCCGCAG  52 68
         cdd 2067846 .. 2067886 - -24.3  -2.73875   TGCTGCTGAACACCA  CAAAACAACAAGGGGAGCC ACT GGCTCCCCTTGTTGTTTCA  GGCAACGGCAGGTCA 100 38
    AHA_1890 2063660 .. 2063677 - -12.7  -5.71712   GTGTAGATAAAAAAA             GAGCGCC TGAT GGCGCTC              TTTTTTGTGGCTCGC 100 43
    AHA_1877 2052622 .. 2052643 - -11.6  -2.55351   TGTTTTTATACGAAG           TTGCCGGC GACGGG GCCGGCAA            GGGGTGGGTGCCGCT  68 63
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 2047227 .. 2047245 -  -5.8  -3.30124   TTTCAGGCGCGACAA             CGGCGGGC AAG GGCCGGCG             GCGAGCCGCCGGGCG  54 45
        trxB 2035050 .. 2035069 - -13.6  -4.98531   TCCTTAAAGTAAAAA            GGCATGCC TCGC GGCATGCC             TTTTATATCCCTTGT 100 43
    AHA_1862 2033714 .. 2033746 - -10.7   -2.5955   AGGGGGGAGAAGTGA     CCCGACACGC-TGCC GGCTG GGCAAGC-TGTCGGG     CGGGTACTACACGGA  66 61
         aat NONE
    AHA_1859 NONE
        infA 2031423 .. 2031462 - -18.8  -4.08064   AACGCTGTTGGAAAA  CCACAAAAAACCCCAACC GGAA GGTTGGGGTTTTTTGCTG   AATTCCTGGCTTAGC 100 36
        cspD 2028279 .. 2028301 -  -9.9  -5.84381   GCAGCAATAAAAAAA          CCGGCAA-CC TTGC GGCTTGCCGG           TTTTTTTATTTATCC 100 51
    AHA_1853 NONE
    AHA_1852 2026926 .. 2026965 -  -9.5  -2.81922   CACCACTGAAAATAT  CCATTAATG-CCTGCATC GGAGA GATGCATGTCATCAATGG  CGCGCCCTGCAGGAT  64 23
    AHA_1851 2026737 .. 2026757 -  -7.5  -2.72977   ACGCCACACACACCA            CCCGTACCG ACA CTGTACAGG            CAACCGTCAGGACGC  55 106
    AHA_1823 1987081 .. 1987097 - -13.7  -5.05601   GAGTAGATAGAAAAA              GGCGCCA ATC TGGCGCC              TTTTTTGTTGCTGGT 100 44
    AHA_1820 1983764 .. 1983798 - -21.8  -2.89881   TAGCCAGGCTACAGA     CAATAAAAAACCTCGC GAT GCGAGGTTTTTTATTG     CGACGATGCGGCTTT 100 42
    AHA_1814 1980261 .. 1980282 - -17.3  -2.67705   CGATAATGGACAGGA           TGCCGGCCC GATG GGGCCGGCA            TTGCATCAGGGGCGG  90 42
        ribA 1974092 .. 1974132 - -19.9  -2.85351   CGCGGCGATATGAGA  GCAACAAAAAACGCCTCCC GAT GGGAGGCGTTTTTCATGGC  GGCGAGCGGCGAGGC 100 45
    AHA_1804 1970807 .. 1970828 - -14.4  -3.73224   CCAGGCTTGATGAAA           CGGGGCCG CTTGAC CGGCCCCG            TTTCATAGCCGAGAT  95 45
    AHA_1799 1965648 .. 1965658 -  -2.4  -3.65522   CAGTGACCTTAAGAA                 GAGG CGC CCGC                 CTTGGCAAGCTCAAT  50 48
    AHA_1798 NONE
    AHA_1797 NONE
    AHA_1796 1963091 .. 1963120 - -19.5  -3.06831   TTAAGGTTCACTCAA       TAAAACAGGGCGC CAAG GCGCCCTGTTTTA        TTGTTGAGAAGAAAG 100 45
    AHA_1792 1959713 .. 1959735 - -14.9   -4.3208   CTCGATAACGCAAAA           CGGCATGGG TTCCC CCCATGCCG           TTTTTGTTTCTGGCG 100 54
        mepA 1957689 .. 1957718 -  -2.8  -3.48395   ATTTTTTGCAGATAA       CGGCTCACCATA CCAGCT TGTGGTCAACCG        CCACAACGGGCGGGC  49 19
    AHA_1788 NONE
    AHA_1787 NONE
    AHA_1786 1955602 .. 1955635 -  -6.7  -2.52543   ACGGGGCGTAATTTA     GGGGAAAG-GGCTGCC TGG GTCAACCACTTTTCCC     CTTATTTTTCATAAT  51 91
    AHA_1785 1955440 .. 1955455 - -10.4  -5.46698   CTCAAAAGCAAAAAA              CCGACC ATCA GGTCGG               TTCTTTAAAATTTGG 100 38
    AHA_1784 NONE
        motB 1953378 .. 1953396 -   -16  -3.01269   AATCGTGAAATGAGA             GACCCCGC CAG GCGGGGTC             TGCTCGATCAGGGTT  93 33
    AHA_1782 NONE
    AHA_1781 NONE
    AHA_1780 1950221 .. 1950236 -  -3.2  -3.01712   CGGGTCTTGGTAACA              GCCGTT ACTC AACGGT               CCACATCCGACATAA  43 18
    AHA_1779 NONE
        nuoF NONE
    AHA_1777 1945447 .. 1945460 -  -2.3  -2.95774   CAGATCGATCAGAGA               GTCGC TCAT GCGAT                GGCCTCCTGCAGGTT  40 17
    AHA_1776 1944393 .. 1944435 - -11.4  -2.83715   TTCATCAGCACCACA GCCCGTGCCG-GCTGCATCCC GAGC GGGATGCAGGGCGGC--GGGC AAGCAGACGTTCCAG  69 77
    AHA_1775 NONE
    AHA_1774 NONE
    AHA_1773 NONE
    AHA_1772 NONE
    AHA_1771 NONE
    AHA_1770 1937945 .. 1937961 - -10.8  -5.71712   GGGCAGATAAAAAAA              CCGGCC ACTTG GGCCGG              TCTTTGAGGGGGCGT 100 45
    AHA_1769 NONE
    AHA_1768 NONE
    AHA_1767 1933650 .. 1933666 - -10.8  -5.95539   TCGCAAACAAAAAAA              CCGGCC CCTGT GGCCGG              TTTTTTTATGGCGGC 100 48
    AHA_1765 1927736 .. 1927751 - -11.8  -5.26316   TGAGGCGATAAAAAA              CCCGGC GATT GCCGGG               TTTATGCTGTGTGTT 100 356
    AHA_1743 1908090 .. 1908104 - -11.4  -3.05844   GGGCTCAGCGCAAGA               GGCGCA CTC TGCGCC               GGCGGGTGGGGTTGC  72 0
    AHA_1742 NONE
    AHA_1741 1905440 .. 1905456 - -10.1  -4.44915   GAATGATGTAGAAAA              GGCCTCA TTG CGAGGCC              TTTTTGCTGTCCGGG  88 91
    AHA_1733 1897445 .. 1897475 -  -8.9  -5.60993   GCGCGGATAAAAAAA       TCCCGGCGTCGTC GCAAG GACAAGGCCGGGT       CATCAAACAAGGAAT 100 300
    AHA_1732 1896480 .. 1896509 -   -15  -3.89346   TTGTCAGGCCAGAAA       GCAGACCGGCCC TTGAAC GGGCCGGTCTTC        AGAGCGGGGAGGCTT 100 39
    AHA_1731 1894809 .. 1894827 - -14.6   -5.5112   CGTACCAATAAAAAA             GCCGACTC AGT GAGTCGGC             TTTTTGTCCATCTGG 100 47
    AHA_1729 1892999 .. 1893034 - -16.8  -4.03413   AGGGGCCCAGATAAA    CAGCGGGCCCTTGCCA CCGG TGGCGAGGGCCCGCAA     GGGCATGGCTGATCC 100 70
    AHA_1721 1886213 .. 1886232 - -13.6  -3.89354   GTTGGAAACCAACAA            TGCCCTGC AATC GCAGGGCA             TTTTTCTTTTGTGTC  93 79
    AHA_1714 1876939 .. 1876960 - -15.9  -5.42975   GGAGATAAAGAAAAA           GCCCGTCAC GTTG GTGACGGGC            TTTTTGCTGTTGGTA 100 235
    AHA_1710 1872994 .. 1873009 - -11.8  -5.61596   ACGGCCATAAAAAAA              CCCGGC CTGG GCCGGG               TTTGTGGTACGTGTG 100 56
    AHA_1708 NONE
    AHA_1707 1868743 .. 1868758 -  -4.6  -3.48004   GGATCATAACAAAAG              TTGGCG ATGG CGCCGA               GCATTCCGATGCTGT  52 58
      mtnN-2 1867944 .. 1867968 - -17.2  -3.14132   GGCGGCCCCGAGCAA          GATGGCCGCC GGAGT GGCGGCCATC          TGTTCCAGCGTGGTG 100 48
    AHA_1705 NONE
    AHA_1704 1866178 .. 1866195 - -12.7   -5.4505   CTGCTGAATAAAAAA             CACCGGC GCTT GCCGGTG              TTTTTTTATTGTGAA 100 60
    AHA_1697 NONE
    AHA_1696 1857401 .. 1857418 -  -9.1  -5.64274   GCATGCATAAAAAAA             TCCGGCC AATG AGCCGGA              TTTTTTTATTTCACT 100 59
    AHA_1694 1854719 .. 1854751 - -11.4  -2.53271   GGAGTGTCAGAATAT     TGACGACATCG-GGC GATG GCTGCGATGTCGTCA      GCGGATTGTCGATTT  68 61
    AHA_1690 1842396 .. 1842411 -  -3.2  -3.09313   AATGACAGACATAGA              CGACTC CAAT GATTCG               AGCAGGCCGTTATTT  43 72
        pflA 1841540 .. 1841566 - -10.1  -3.60475   AAGCCCGATGTGAAA         GGGGCCGGC GTTTTCCCG GCCAGCCCC         TGAGCTATCAGTATT  71 33
    AHA_1688 1840809 .. 1840824 - -11.8  -5.63504   AACGCCATAAAAAAA              GCCCGC AATT GCGGGC               TTTTTTGTCGCTGCG 100 47
    AHA_1683 1836048 .. 1836079 - -24.6  -3.53012   TTCCCCTCTTTTAAA      CGACAAGCCCGGCA GCAG TGCCGGGCTTGTCG       TTGTTGGCGATGGGT 100 54
    AHA_1681 1834050 .. 1834065 - -11.8  -3.29461   GAAGCGTTGGTAGAA              GGCCCC TCGC GGGGCC               TTTTTTATGGCCGCA  78 30
    AHA_1677 1831295 .. 1831314 -   -15   -3.4252   TCTCATTCACGACAA            GGGCGCAC CTCG GTGCGCCC             TTGTCGTTTTATGAT  95 98
    AHA_1675 NONE
    AHA_1674 NONE
        mipA 1827464 .. 1827480 - -13.7  -4.60487   GATGATCGTGAAAAA              GGGAGCC GAG GGCTCCC              TTTTGTTTGTTCGTA 100 59
    AHA_1671 1825572 .. 1825597 -  -8.9  -3.36515   GCGCACGGCCAAATA         CATCCGCACCT GATC AGGGGCGGCTG          CCGAGGTTTTCCTTT  66 128
    AHA_1665 NONE
    AHA_1664 1816885 .. 1816901 -  -9.4   -5.4505   GGCTGCAATAAAAAA              CCCGCT GCAGG AGCGGG              TTTTCAAGGGGCATG 100 50
    AHA_1663 1814462 .. 1814479 -  -3.3  -2.78463   AGTGCGTGCATCAGA             GCCCCAC GAAG GTGTAGC              GCAGGCTGGCGCTCA  41 3
    AHA_1662 NONE
    AHA_1661 NONE
    AHA_1660 NONE
    AHA_1659 1807889 .. 1807939 - -14.1  -2.71712   GTCCGGGTGCCAAAT GCGGGTGGCCAGTCGGGATCCTG TGCTCAT CGGGATCCC--CTGGCCACCCGG CTTCATCAGCGCACC  83 31
    AHA_1658 1807164 .. 1807177 -  -9.5  -4.85782   TTGGCTAAAAATAAA               GCGCC ATTC GGCGC                TCTATTTTGTTGTGT 100 79
    AHA_1657 NONE
    AHA_1656 1805625 .. 1805664 - -22.4   -3.7941   CACGGCTGAGAATAA  CCAAAAGCAAAAGGGGCC TGTC GGCCCCTTTTGCTTTTGT   ACTCCCGCTTGTGCG 100 52
        glpF NONE
        glpK 1794806 .. 1794833 -   -20  -5.00616   GGCGGCGCTAAAAAA        GAGAGGCCGACA TTGC TGTCGGCCTCTC         ACGTTTTTCAGCTCA 100 61
    AHA_1646 1792829 .. 1792855 - -12.3  -4.22214   AGTGAGGTAAAAGAA        GCA-GGGAGCGC CGGG GCGCCCCCTTGC         CATCAGGCATTGGCC  91 28
    AHA_1645 1792363 .. 1792375 -  -4.7  -3.06341   AATAGGTTGCAAAAG                GGCGC TCA GCGGC                GCGGCAAATCAGGCC  47 34
        dkgB 1791335 .. 1791357 - -19.2  -5.81622   ACAAAACCAAAAAAA           GCGGGAGGCA CAG TGCCTCCCGC           TAGGGGTTGGAGAAG 100 201
    AHA_1643 1789940 .. 1789959 - -13.6  -4.28548   ACGCAGCCATGAAAA            GGCCGACA CAGG TGTCGGCC             TTTTTGCATCCTGCT 100 52
    AHA_1639 1785517 .. 1785533 -  -7.9  -3.24032   ATTTTGCAAGGAACA              GGCCTCA TCA TGGGGCC              TTTTGGTCTTTGGCG  59 16
    AHA_1636 NONE
    AHA_1635 1783150 .. 1783162 -  -4.7  -2.99433   CAATGACATGACAGA                CTCCG TAA CGGGG                AAAACGCCATTATAC  46 88
    AHA_1634 1782952 .. 1782964 -  -3.3  -2.78384   GGGTCTGTCATGACA                CCTCC TGG GCAGG                ATGGGGTGGCAGCGC  41 49
    AHA_1633 1782374 .. 1782416 -  -9.2   -3.8211   GGTTATCCATAACAA CTCTCGGGCAGTA-AGGGA GCCATA TCCTTGCACTGCCCGAGCG CCGAGTCAGCCCCTC  73 89
    AHA_1632 1780730 .. 1780761 - -10.1  -3.53012   CTGGCGCTGGTCAAA      CAGGCGCGGGG-AC AGGGG GCGCCGCGCGCCTG      CTGGCGCGAGCCGCT  68 433
    AHA_1630 NONE
    AHA_1629 1778417 .. 1778435 -   -16  -5.21709   GTTGACATTAAAAAA             CACCGGCC ACA GGCCGGTG             TTTTTGTTTTGGCGA 100 46
    AHA_1626 1775320 .. 1775347 - -17.1  -3.74693   GTTCATCCGAGCAAA        CAGAGGGCAGC TCCGGG GCTGCCCTCTG         TGGTAATGCTGTCCG 100 61
    AHA_1625 1773400 .. 1773416 - -10.1  -2.54098   GCCGGTAACCAAGAG              TGGAGCC TGC GGCCCCA              TCGAGTCGGTCTACT  59 211
    AHA_1622 1771509 .. 1771529 - -18.3  -4.26076   TGACCCCGACGAAAA            CGGCTCGCC ATT GGCGAGCCG            TTTTTTTATGAGCGC 100 51
    AHA_1617 1766766 .. 1766788 - -20.6  -4.84017   AATGGGTCAGAAAAA           CGGGCCACCC TCA GGGTGGCCCG           TTGCCGATGGGAGAA 100 50
    AHA_1616 1764576 .. 1764597 -  -7.2  -5.77853   AATTGGCAAAAAAAA           GCCAGCCC GGCAAG GGGCTGGG            GTGAGTGACGGGGAC 100 45
    AHA_1615 1763649 .. 1763684 -  -8.2  -2.87211   AGTGCGGCTGATAGA    TGTCGG-TTTGGGGCCC CAT GGGCCGCAGATCCGGCA    GATATCCGCGTCGGC  59 470
        pepT 1759260 .. 1759287 - -20.6  -3.60296   CAGTTTGATGGCAAA        GAGGGGAGCCGG TTAA CCGGCCCCCCTC         TTGTTGTCATGGCGG 100 55
    AHA_1611 1757408 .. 1757433 - -19.1  -4.08546   AGCATCAATGACAAA         GAGAGGGAGGC ACAG GCCTCCCTCTC          TCGTTGTGGCGTCTG 100 42
    AHA_1606 1753181 .. 1753209 -  -3.1  -3.73534   CAAGCGGATCAACAA        GCATAAGACCGAC GAG GCCAATCTCATCC        TGACCCTGCAGCTGG  54 236
         fhs 1751175 .. 1751188 -  -4.5  -2.82082   ATCAACCATCAACCA               TCAGC TCAG GCCGA                CAATTTCGCCGTTAT  45 12
    AHA_1603 1750954 .. 1750975 - -15.1  -3.91066   AGGCAAATAACAGAA           GGCCCCGCC AATC AGCGGGGCC            TTGTTGTTTCTGGCA 100 108
    AHA_1600 NONE
        moeB 1745865 .. 1745883 - -11.7  -5.76633   TGACAGATAAAAAAA             GCCGACC TCATG GGTCGGC             TTTTTTGTTGGCGAA 100 59
        narQ NONE
    AHA_1581 1730201 .. 1730216 - -10.4  -5.35354   CAGAGAATGAAAAAA              GCCACC GGAA GGTGGC               TTTTTGCTGGATGGG 100 48
    AHA_1580 1729338 .. 1729360 - -12.1  -5.81412   CGCAGCTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA 100 224
    AHA_1577 1724872 .. 1724893 -  -6.6  -3.45571   GCCTGCAAACATGAA           GAC-GGCGA GCAAG TCGCCCGTC           TGCTGACCGAGCTGG  57 139
        fadE 1720061 .. 1720079 - -11.7  -5.61596   AGCCCCATAAAAAAA             CGCCTCC ACATG GGAGGCG             TTTGACTATCTATGT 100 46
    AHA_1572 1718355 .. 1718372 - -10.5  -4.74801   CAACCGCACGAAAAA             GCCGCCC ATCG AGGCGGC              TTTGTTATTTATGGG 100 69
        rnhA 1715664 .. 1715674 -  -8.2  -3.25204   TCATGGGCAAACAGA                 GCCG GAT CGGC                 TGGTGGCGGGAGAGT  58 172
    AHA_1567 1714283 .. 1714298 -    -4  -5.00616   GGTTTGTTCAAAAAA              CG-TCCT TCC AGGATCG              CAGCACGGTGAAGGT  77 2
    AHA_1566 1712613 .. 1712633 - -12.6  -5.71712   TTCCAGATAAAAAAA            TACCCCGC TTTTG GCGGGGTA            TTTTTTTATGAAGTG 100 49
    AHA_1564 1711323 .. 1711365 - -10.1  -3.05596   TACTGCGTGACCGAA GGGATCTTCACCTATGTCGCC ATC GACGA-ACAGG-GAAAATCCC GTCCGGTACCAGTCT  67 49
      yfiA-1 1703333 .. 1703349 - -10.8  -4.72272   TTCGGGCAGCAAAAA              GGCGGG GAGAT CCCGCC              TTTGTCGTTGTTGGC 100 57
    AHA_1556 NONE
    AHA_1555 1702317 .. 1702336 -   -15  -5.10968   AGGAAGAGACAAAAA            CGGGAGGC ACAA GCCTCCCG             TTTTTATTGGTGGCA 100 127
    AHA_1552 1695740 .. 1695757 -  -4.1  -2.65354   GTCATGGCAAATTCA             GCTGC GGACACGG GCAGC              AAGCCTGGTTCTGGG  42 5
    AHA_1551 1695358 .. 1695368 -  -2.4  -2.59683   AGCTGACCCCAGAAC                 CCTG AAC CGGG                 CCCTGAACTCAGTTG  38 34
    AHA_1549 NONE
        pcaC NONE
    AHA_1547 NONE
    AHA_1546 1690102 .. 1690127 -  -2.5  -2.60075   GGGGCGCCAATCAAG         CGAAGAG-CGGC CGA ACCGGCTCATCA         GTGACCGTAGCGCTC  38 23
    AHA_1545 NONE
    AHA_1544 1687770 .. 1687785 -  -2.5  -3.53224   CAGGTGGCGGTCAAA              CAAGG TGAACT CCTCG               GTCAAAAACAGGATT  47 27
    AHA_1543 1687077 .. 1687090 -  -2.3  -3.36803   CAAGGCGACGCATAA               GGTTC TCAT GAGCC                TGAAAAAGAGTGTCG  45 105
      mltB-1 1685895 .. 1685923 - -11.8  -3.59979   CGGGGGCACTGTAAA       CGCACACTGCACC CGAA GGCGCAGTGTG-G        ATGGTTGGCAAGGCG  81 73
    AHA_1540 1684315 .. 1684350 -   -11  -3.05816   CGAGGCTTGATCGAA    CGTCAGGCCGCCCCGA GCGA TCGGCGCAGCCTGCTG     GTCTGTTTGACCGAC  66 200
    AHA_1538 1682986 .. 1683006 - -12.6  -3.92324   CCGCGGAATATGAAA            GAGGAGCC TTGAT GGCTCCTC            TTTTTTATTGCGCTT  93 59
    AHA_1535 1679660 .. 1679670 -    -4  -2.66316   GGGCGCACTATATCA                 CAAA GGA TTTG                 AAACTGTTAACCGCC  42 32
    AHA_1534 NONE
    AHA_1533 NONE
    AHA_1532 1678468 .. 1678495 -   -20  -4.43844   GCATGAGCCAGAAAA        CAACAAGGGCCC CGCG GGGCCCTTGTTG         TCAGAGAGGCTGGCG 100 49
         fur 1677261 .. 1677277 -  -9.4  -5.38047   GACGGACACAAAAAA              GCCAGC GTGAT GCTGGC              TTTTTTATTGTCTCT 100 51
        nagB NONE
        nagA NONE
        nagC 1667426 .. 1667444 -   -16  -5.14163   ATCTATCAATAAAAA             CGGCAGCC ACT GGCTGCCG             TTTTTTATTTCGCAA 100 51
    AHA_1520 1661362 .. 1661394 -  -3.2  -3.83998   CTAGTGTAGAGGAAA      GGTCGGCGTTTGTC TTGAC GCCAAGCCCCGTCC      AGCCACAAAAAAACG  54 81
    AHA_1519 NONE
    AHA_1518 1659218 .. 1659236 -    -3  -2.93382   CTCCATACTGACACA             CCCGCCGA GAC TGAGCAGG             GAGAGCAGGGTCATT  42 122
    AHA_1517 NONE
    AHA_1516 NONE
    AHA_1515 1655943 .. 1655960 - -14.1  -5.28176   GGCAGGCATAAAAAA             GCGCGCC CTTT GGCGCGC              TTTGGTCATGGGTGT 100 46
    AHA_1513 1654168 .. 1654185 - -14.1   -3.9644   CGGCCAAGACAACAA             CGCCGGC AAGT GCCGGCG              TTTTTTATGGATGGT 100 44
    AHA_1511 1650930 .. 1650956 - -22.4  -3.81146   CCGTTGAATCAACAA         CAACAGGGCCCG TCG CGGGCCCTGTTG         TTTTATGGCGGTCAC 100 37
    AHA_1509 NONE
    AHA_1508 NONE
    AHA_1507 NONE
    AHA_1506 1646632 .. 1646656 - -17.1  -3.03441   CATCAGCTGGTAACA          GGAGGCCCCGC GAT GCGGGGCCTCT          GTCTGATTACTCCCA 100 32
    AHA_1503 NONE
    AHA_1502 NONE
    AHA_1501 1642343 .. 1642376 - -23.2  -2.93207   AAGAGGAGGCAGAGA     GCGCGGGCCCTGCC ACCATG GGCAGGGCCCGCAC      TGGATCAGGCCGGGG 100 30
    AHA_1500 NONE
    AHA_1499 1640249 .. 1640263 -  -8.5  -4.72272   GGCGGGCAGCAAAAA               GGGGC GCAGG GCCCC               TTCTTGGTAACAGGT  90 48
    AHA_1498 1639725 .. 1639743 - -13.1  -5.06816   AGCGGCCAACAAAAA             GCCCGGC GTTGG GCCGGGC             TGGCAGGATAAGTTG 100 66
    AHA_1495 1630491 .. 1630514 - -17.4  -4.48877   GAAACAGGGAGAAAA          CGGCCGGGAG CGGG CCCCCGGCCG           GTGGGGTTATCGCTG 100 51
    AHA_1494 1628564 .. 1628583 -   -15  -4.45544   CCGTACCAATGAAAA            CGGCTGCC CTCG GGCAGCCG             TTTTGCTTTGTGCGC 100 47
        bioA 1622218 .. 1622241 - -11.7  -4.37991   GAAAAAGAGTCAAAA          GACCCTGCC TGGTCG GGCAGGGCC           TGCCACGTCTGACTC  95 39
    AHA_1487 1620954 .. 1620968 -  -4.2  -2.62792   ATGGACGTGAAAGAG               CGGC GACGGGG GCCG               GACCGGCTGACACGG  44 343
        asnC 1619306 .. 1619323 - -12.7  -5.07486   GACGGGCAACAAAAA             GCCGACC CTGA GGTCGGC              TTTTAAGGCAAAGTC 100 47
        dcuB 1617573 .. 1617600 - -22.8  -4.09685   GGGCAGGGCGCAAAA        CAGCAGGCCCCC GGGT GGGGGCCTGCTG         GATTGGCTGAATGGT 100 50
    AHA_1484 1616759 .. 1616790 - -11.6  -4.87803   CAGCGTCAAAGAAAA      GCAAAACGGGAGGC CATC GCCTCCCGTTTTTT       ATCTGTCCTGTCGGT 100 68
    AHA_1481 1613503 .. 1613518 - -11.8  -4.64157   CAAAGAAGTACAAAA              CGCGCC GGCG GGCGCG               TTATTGTGAGGGGTG 100 47
    AHA_1480 NONE
    AHA_1479 NONE
        dapE NONE
    AHA_1477 NONE
    AHA_1476 1609746 .. 1609777 - -20.2  -2.89055   CAAAGTGGGCAGATA      GCGACAGGGGCACC CGTG GGTGCCCCTGTCGG       CGGGCTCGAGTCAGT 100 36
        cvrA 1607813 .. 1607832 -  -2.1  -2.71416   GACGAGGCAGACAAC            GACGATC AGACAG GATCTTC             TTCCAGAAAGCGCAC  39 11
    AHA_1474 1606623 .. 1606638 -  -3.2  -2.71924   CAGGTTCTGGTAAAT              CAGGGA CGCA TCCATG               CAGCCTCCTGTGGCA  41 59
    AHA_1473 1605363 .. 1605394 - -14.5  -3.88787   TGATAGCCTCATAAA      GAAAAGCCCCGGG GTAATG CCCGGGGCTTTTT       CGTTGGCGGCGCATC 100 60
    AHA_1470 1601803 .. 1601828 - -14.7  -3.39784   TCAGCTTCAATAACA         GCAAGGCCCCG GATC CGGGGCCTTGG          TCTGCGCTCACGAGG  95 47
    AHA_1469 NONE
    AHA_1468 1600722 .. 1600750 - -20.4  -3.72788   GCTGACAAGATACAA        GAAGGGCCAGCC TTGTC GGCTGGCCCTTC        TTTATTTGGCGGATT 100 91
    AHA_1465 1598126 .. 1598140 -  -4.2  -3.79747   GTACCCAGCAGGAAA               TCCCGA ACG CCGAGA               CCATGGCGAAAACCG  56 208
    AHA_1463 1595861 .. 1595882 - -15.9  -5.02476   ATATGGTGCAAAAAA           GAGGGGCCA AGTT TGGCCCCTC            ATCTCATCTGTCGAG 100 49
    AHA_1449 NONE
    AHA_1448 1580924 .. 1580952 -  -8.1  -5.10497   AAGCCATGGAAAAAA        TAGCCAGAGGG TGCCTGG CCCTCTGGCCG        ATGGGATCACTCCTC  95 32
    AHA_1447 1580466 .. 1580490 - -14.4  -4.07568   CTGGCGGCGCTAAAA          CAAAACCGGC GCGAG GCCGGTTTTG          TGGATGGGATCAGAG 100 35
    AHA_1446 1579684 .. 1579697 -  -9.5  -5.37043   ACCGCATATAAAAAA               GGCGC CTTG GCGCC                TTTTTTGATCCCGTC 100 68
        smpB 1578122 .. 1578135 -  -9.5  -2.53876   GTTGATGGCAATCGA               CCGGC CTTG GCCGG                TCGATTGCTGGTTTA  63 70
        ssrA 1577665 .. 1577688 - -18.2  -4.96848   TGCCGGATATAAAAA          GGGCCACCTC TTGC GAGGTGGCCC           TTTCCAAACGTTTGG 100 38
        dsdA 1573244 .. 1573260 - -13.7  -4.95155   CCCACACGAGAAAAA              CCCGCCA GTC TGGCGGG              TTTTATGGCTGAAAA 100 46
    AHA_1437 1572705 .. 1572723 - -13.8  -4.36595   CACTGAAATGCAAAA             CCGGCGCC ATG AGCGCCGG             TTTTTTTATGGGTGA 100 72
        manA 1568972 .. 1568996 - -18.7  -5.04385   GAGACCGTCAAAAAA          CAAGGGCCATC CTG GATGGCCCTTG          TGGTCATGAGTCGAT 100 51
    AHA_1433 1568251 .. 1568271 - -16.1   -4.3208   CGGCAGAATGTAAAA            CCCCCGCCA GCA CGGCGGGGG            TTTTTTATTGTGGTT 100 30
    AHA_1431 1565386 .. 1565406 - -14.7  -4.56358   GATACCGAGATAAAA            GAAGGGGCC CTT GGCCCCCTC            TGTCGTAGGTACTCT 100 52
    AHA_1430 1564873 .. 1564886 -  -3.7  -2.52543   ATGTTGGCGAAGCCA               GCGCC AACG GGCGG                CGGCTGTTCGGTCAC  42 84
    AHA_1429 1564098 .. 1564126 -    -8  -2.87132   GCTGCTGGCCAGATA       GCGCGCCGCCGCC CTCG GGCGGCGGTT-GC        TATTTCGAGGCGGCC  59 25
      malI-1 1559765 .. 1559804 -  -8.4  -2.84801   GATGGTGAAATACCA  GTTGCGGCGGCTGGGGCG CGGG CAGCCGAGCCGCCCCAAG   ATCGCGCCCGCCCTG  55 144
    AHA_1424 NONE
    AHA_1423 NONE
    AHA_1422 1556833 .. 1556872 -  -9.2  -4.18488   ATTGAGTTGAATAAA  GAGGCGGAATTCCACGCT ACCG ACCGTGGATTACAGCCTC   CAGCCTGCTACGGTC  80 228
    AHA_1421 1553340 .. 1553367 - -15.6  -4.42788   TCGAACCCGACAAAA        GAGGAGGCCACC CGCA GGTGGCCTCGTC         CGGTTTGGTCGCCGC 100 69
        uhpT 1551465 .. 1551486 - -18.7  -5.26918   ACAGGGGATAAAAAA           CGGCCCGCC AGAA GGCGGGCCG            AATGCACACTACGGA 100 130
    AHA_1419 NONE
    AHA_1418 1550206 .. 1550216 -  -2.4  -3.14132   TGTCGCGGGCATGAA                 CGAC GGG GACG                 GCTCAGCCGAGCAGG  42 28
    AHA_1417 NONE
    AHA_1416 1548657 .. 1548669 -  -6.2  -4.03413   AGGCTCTCAGATAAA                GGCC TTGAG GGCC                GACAGCGGCAGCCTG  65 4
        mnmA 1547196 .. 1547222 -  -6.5  -2.83905   GGAGAAGGGAGTACA        GCGC-GGACGCT CGTG AGCGCCCAGCCC         TTAGACCGGATGGCT  52 26
    AHA_1414 NONE
        purB 1544842 .. 1544883 - -15.2  -4.52589   GGGTGCCACATAAAA TAACCGGGGCCCTGTTGCA GATCA TGCA-CAGGGCCCCGGTGG TGTCACTTATCCGCT 100 40
    AHA_1412 1543564 .. 1543579 - -11.8  -4.59109   TATATCTGTGAAAAA              GGCGCC CTCG GGCGCC               TTTTTTATCTCTGTC 100 48
    AHA_1405 1536139 .. 1536157 -   -16  -4.68593   TGCATCATGCAAAAA             GGGGAGCC GCT GGCTCCCC             TTTTTTATTTCACAA 100 60
    AHA_1403 1534858 .. 1534877 - -16.4  -5.96219   CAGGCATAAAAAAAA            CGCCCCGC AAGA GCGGGGCG             TTTTGGCTAGAACGG 100 47
        rimO 1494749 .. 1494771 - -13.5   -5.5604   GCAATCAATAAAAAA           GCCAGTCAG GGTCA CTGACTGGC           TTTTTTGTTGGCGCT 100 50
        rtxB NONE
        rtxD NONE
    AHA_1354 NONE
    AHA_1353 1472130 .. 1472142 -  -6.2  -3.14564   CGAGCGGCGGATGAA                GCGC ATGGG GCGC                AGCAGACGAACGTCC  52 42
    AHA_1352 1470736 .. 1470761 - -20.5  -2.52464   CTGCGCCGCAATGGA         CTGCGCCTGCC GGGT GGCAGGCGCAG          TGGGTAGGGATGGGC 100 41
        hexR 1468279 .. 1468303 - -13.6  -2.88579   GGAAGGTGGCAGAGA         CAGCCGGGGGC CGAG GCCCCCG-CTG          CTTACGAAGAGTGGG  81 27
       pyk-2 1466661 .. 1466678 - -12.7  -5.60993   TTCGCCATAAAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTGGTGCCGGTG 100 49
    AHA_1344 1458058 .. 1458088 -  -9.2  -3.17571   AATGGGGCAAGTCAA      TGAGCTGCACTCA GTTTTA TGAGTG-AGCTCA       TGGAGTTACGGTCAA  65 43
    AHA_1343 1457902 .. 1457934 - -20.8  -3.91144   CGCACATCCTATAAA      CAACAACGCCGCAT AAGAG ATGCGGCGTTGTTG      ATTGCGTGACTGGTG 100 36
    AHA_1340 1453399 .. 1453415 -  -3.7  -3.81958   ACCTTGAAATAAAGA              TGAAAGC GTC GCTTTAA              ATATTTTAATTGGAT  56 303
    AHA_1339 NONE
    AHA_1338 NONE
    AHA_1337 1450904 .. 1450918 -  -4.2  -3.28712   TTTCGCCTTGCATAA               GGCC GAATTCA GGCC               CGGGAAAAGATCGTT  49 467
    AHA_1336 NONE
    AHA_1335 NONE
    AHA_1334 1449779 .. 1449795 -  -2.1  -2.82658   TCAGACTAAAAAAGT              GCGGACG GGG CGTGCCC              TCTCAGGTCATGCCT  39 33
        eutE NONE
    AHA_1332 NONE
    AHA_1331 1446483 .. 1446531 -  -2.4  -3.53712   ATTGCCAACAATCAA CTCGTCGGCACTGATG-GTCAGC GGTA GCTGACGCATCAGCTCGTAAAAG CGACGTGCCGGTTTG  47 203
    AHA_1330 1443276 .. 1443294 -  -3.8  -4.24342   TTGGTGATTAAGAAA             GACGGGTT ATC AACGCATC             GATCAGAACTTCTCA  64 28
    AHA_1329 NONE
    AHA_1328 NONE
    AHA_1327 NONE
    AHA_1326 NONE
    AHA_1325 NONE
    AHA_1324 1439530 .. 1439556 - -18.1  -2.88959   CGAGATCAAATATCA         GGCCCAAGCTG CTAGC CAGCTTGGGCC         TTTCTCTATTTGCAC  95 138
    AHA_1321 NONE
    AHA_1320 1432821 .. 1432860 - -11.4  -2.90194   AGTGCTGCAACGACA  GCAGGCACGACGGCGGAGA ACA TCT-CGCCACCGGGCATGC  GCTCATCTGCTGGTT  71 344
    AHA_1318 NONE
    AHA_1317 1430486 .. 1430507 - -14.5  -5.47218   TCGTATTGAAAAAAA           CAGGCTCAC CTCG GTGAGCCTG            TTTTTTTATGGCGTT 100 106
    AHA_1313 NONE
    AHA_1312 1425887 .. 1425904 - -11.3  -5.05782   ATCCATGCGAAAAAA             TGGCGCA GTTA TGCGCCA              TTTTTTTTGCCTGAA 100 134
        purU 1423411 .. 1423440 - -19.5  -2.89564   GCTTTAGTGCACATA       CAACAAAGGCTCC CGTG GGAGCCTTTGTTG        TTTTCAGTGGCCGGG 100 42
    AHA_1307 NONE
    AHA_1305 1417776 .. 1417790 -  -2.7  -5.00884   ACGGCTTGCAAAAAA               CCGCG CAGGC CGCGT               CATTACTGACTTTTC  76 67
    AHA_1304 1416201 .. 1416222 - -17.3  -4.55209   GACAGACCAAATAAA           GAGGCCGCC CGGT GGCGGCCTC            GCGCGGCAATGGCCG 100 43
    AHA_1303 1415267 .. 1415283 - -10.8   -4.4078   TGGCGGGAACGAAAA              CGGGCC ACAAG GGCCCG              GCTGCTTGCGTTGCT  93 60
    AHA_1299 NONE
    AHA_1297 1411320 .. 1411339 -  -4.9  -3.90744   GCGCCGGCCAAAGAA            GGCCCAC TGGCTG GTGCGCC             TACTGCCACACTTCC  60 25
    AHA_1294 1408817 .. 1408830 -  -5.3  -4.11216   GTGCGAGCCTTAAAA               TGATG CAAC CATCA                GAATCTCATCGTTTT  65 427
    AHA_1292 NONE
    AHA_1291 1406316 .. 1406333 - -12.7  -6.04953   ATAGAAATAAAAAAA             GGCGACC GGAT GGTCGCC              TTTTTAATAGCCAAC 100 262
    AHA_1286 NONE
    AHA_1285 1396390 .. 1396407 - -12.7  -4.34402   GTTCCCACAGCAAAA             GAGCGCC GCAA GGCGCTC              TTTTTGTTGGGGAGG 100 60
    AHA_1282 1393367 .. 1393377 -  -3.2  -3.99153   TCATCATAAAAAAAT                 CCTC GTT GAGA                 TGGCACGTTGTTCAC  56 315
    AHA_1281 1392272 .. 1392301 - -13.7  -4.03234   TGGCGGGGAGACAAA       CAAAAGGGGATGC CGTG GCATCCCCTTTTC        GCATCATCTGAACGG 100 48
    AHA_1280 1390853 .. 1390870 - -12.7   -5.4833   CCAGGCAATAAAAAA             GGAGGCC GGAT GGCCTCC              TTTTCGGCCACCAAG 100 46
    AHA_1279 1389510 .. 1389527 - -11.3  -4.55128   AGGCGCAAAGCAAAA             GGGATGC CTCG GCATCCC              TTTTTTGTGCATCGC  95 122
    AHA_1276 1385231 .. 1385241 -  -3.2  -2.90496   CGTCTCCTTAAACGA                 CTAC TGG GCAG                 GGGCATAATGTCGCT  42 147
    AHA_1275 1384918 .. 1384939 - -15.9  -3.05022   GCCGCCATACAGACA           GATGCCGCC TGAG GGCGGCATC            TTGCTTGCGCTGGGT  93 50
        yicE 1382106 .. 1382122 - -15.1  -3.71794   AGCGAAGGAGGTAAA              GCCCCGC ATG GCGGGGC              TTTGGTGCAAGGATG  95 49
    AHA_1272 1381263 .. 1381282 - -13.6  -4.56914   CCATCCAAACGAAAA            GCCACGAC CCGG GTCGTGGC             TTGTTTTATGGGCAT 100 88
    AHA_1270 1377947 .. 1377970 - -16.8  -4.10552   CTGGATGAAACGAAA          GAGGGGAAGC CGCG GCTTCCCCTC           TTTGCATTCTGTTGA 100 47
    AHA_1267 1375255 .. 1375285 - -24.2  -3.55444   CGCGCACCCTGCAAA       CAAAACGGGCAGCC ACT GGCTGCCCGTTTTG       TTTCGGGGCGGGGGA 100 43
    AHA_1265 1374257 .. 1374286 -  -9.2  -4.24204   CACCGATATCGAAAA       CGGCCCGCGCGGC GAGTA GCCG-GCGGGCAA       AGACGTGCATGAACG  84 71
    AHA_1248 1357829 .. 1357846 - -14.1   -4.4959   TCTAAGCAATGAAAA             GGGCGCC CGCA GGCGCCC              TTGTTGATCACCGGA 100 46
    AHA_1246 1355938 .. 1355957 -  -7.8  -4.65916   TCCATGCCAACAAAA            GAGGGAGC CTGA GCTCCCTT             TTTTGTGTCTGTTGT  83 69
    AHA_1240 NONE
    AHA_1239 NONE
    AHA_1238 1347062 .. 1347085 - -12.4  -5.53288   CGGAAGGCAAAAAAA          CGCCCCGGTA GGCA TAGCGGGGCG           AAAGGCAGCACATCC 100 60
    AHA_1236 1346140 .. 1346156 -  -9.3  -3.55548   TAACAGCTTGCCAAA              GGGGCGC AAT GCGCCTC              GACCCGGCTTGCGTC  68 86
    AHA_1235 1345702 .. 1345726 - -21.5  -2.79023   GAAGTGGAGTAATGA          GCAACCCCGGC CAG GCCGGGGTTGC          TGTTTACTGCTGCTT 100 29
    AHA_1230 1340699 .. 1340727 - -21.9   -4.1347   CTTCAATCAGATAAA        CAAAGAACCCGGC ATG GCCGGGTTCTTTG        TTATGGGGGCACTGA 100 48
        cysZ 1333149 .. 1333181 -  -9.2  -4.78149   TTTATAATGCAAAAA     TGA-AACGGGGCCCC CAAG GGAGCCCTGTTGTCA      CTACCAACCGGCTCA  93 38
    AHA_1225 1332375 .. 1332389 -  -8.5  -5.36441   TGCCCATACAAAAAA               GCGCC TGACC GGCGC               TTTTTTGTTGGCTGC 100 73
    AHA_1220 1328860 .. 1328872 -  -3.3  -3.05644   CTGACAAGCATAAAC                GAGGG CGC CGCTC                ACACGGCCGGGAGCC  43 106
    AHA_1219 1328060 .. 1328070 -  -2.6  -4.11216   TCCTTATTTGGAAAA                 TTAT TTT ATAA                 AACAGCGTATTGGAG  56 49
    AHA_1218 1326987 .. 1327000 -  -3.7   -2.6294   GAGATCATTGAGAAG               CCTGC TCCT GCTGG                TCATCAGCGGCTTTC  42 1
    AHA_1217 1326619 .. 1326631 -  -5.5  -3.42395   TTCATCAGGCAAATA                CCCAG ATC CTGGA                GAGGAGGTAGGTGAG  53 2
    AHA_1216 1325407 .. 1325424 - -12.7  -5.24129   CGCGCCCATAAAAAA             GCCGGTC GATA GACCGGC              TTGTTGCATTGCCAC 100 46
        malS 1323073 .. 1323103 - -25.6  -3.53343   AACGGCTGGTGTAAA       CAGAGAGGGGAGCC ACT GGCTCCCCTCTCTG       TTTGGGGTTGATTCC 100 51
    AHA_1213 NONE
    AHA_1212 NONE
    AHA_1211 1319951 .. 1319980 -  -4.2  -5.22289   TATCAAATATAAAAA       CAGGCCTGCCAA CCATTT TTTGCAGGCCCT        TTTTGAGGCTGTTCA  85 38
    AHA_1210 NONE
    AHA_1208 1315621 .. 1315651 - -17.7  -3.33261   CGCCAACGCGGATAA      CGGACAAGGCCGGC ATAT GCCGGCCTTGT-CG       TCTCCTGCGGCTGGC 100 45
    AHA_1206 NONE
    AHA_1205 1311514 .. 1311532 - -17.4  -5.60993   GGCGGGACAAAAAAA             CGCCCCGC TGG GCGGGGCG             TGGTGATGGGGATGT 100 40
    AHA_1204 1309425 .. 1309454 -  -3.5  -3.53012   GGGGTGGCTGGCAAA       GCCGGTTTATG-GC AGT GCTCATGATCCGAC       CAACCCGAGCTGACC  51 14
    AHA_1203 1308790 .. 1308806 -  -9.3  -5.10029   AGTAACCCGAAAAAA              GCCCCGC AGT GTGGGGC              TTTTTGTTGCAGGTC 100 39
    AHA_1200 NONE
    AHA_1199 1304308 .. 1304339 -   -26  -3.85698   GCGCTGGCCGACAAA      TCACCGCAGCCGGC ATGA GCCGGCTGCGGTGA       TTGGGTTATGCCTGC 100 31
    AHA_1197 1302188 .. 1302207 -   -15  -3.81146   CGCTTGAATGAAGAA            GCCGCCTC GCAA GAGGCGGC             TTTTTTTATGGCCGG 100 44
    AHA_1195 1299451 .. 1299461 -  -6.8  -2.52015   GCCATATTCATCAAT                 CAGC GTG GCTG                 GTAGTGTCCCTTGAG  51 14
    AHA_1194 1297447 .. 1297467 -  -2.5  -4.57569   CGATTTTCTGAAAAA           CCGGGCGC TGGCCT GCGCC-GA            CCTGCTGGCCCCCAA  68 480
         map 1270260 .. 1270278 - -13.1  -5.35224   CTGATAAAAACAAAA             CCCCGGC GGGAG GCCGGGG             TTTGATGTTAACCGT 100 33
        glnD 1267503 .. 1267513 -  -5.4  -3.85698   GTTCTGCTTGATAAA                 TCAG GGG CTGA                 CTCGGCGTCTTGTGA  61 46
        dapD 1266494 .. 1266523 - -17.3  -4.08394   ACAGGGGCGCCAAAA       TCAAAAGGGCGCC ATCA GGCGCCCTTTTAA        ATCACCGCAAAACCG 100 42
    AHA_1169 1265993 .. 1266008 - -11.8  -5.28942   GAGCTCAAAGAAAAA              GGCGCC CATG GGCGCC               TTTGCTGCATCAGAC 100 45
    AHA_1162 NONE
    AHA_1161 1257772 .. 1257790 -  -2.3   -2.9155   TTCCTGAATATTATA            GGCCCGCC CCGT GGCG-GCA             GATTTACAGGGTGGG  40 29
    AHA_1160 1257471 .. 1257481 -  -8.2  -3.92625   GAGAGCTTAACCAAA                 GCGC GGG GCGC                 TGAACAGCGGGGCAA  74 44
    AHA_1159 1256280 .. 1256301 - -15.9  -3.24414   AGCCGCAATGAAAAG           CGCCTTGCC AATT GGCAAGGCG            TTTTTGTTTGGTTCA 100 50
        queF 1254576 .. 1254625 -  -7.1  -3.16881   GATTCATTGGATTAA GGGCAGCACGGGAGTGAGGGCATG TTATC CAAGCCCGC-C-CCCGTGC-GTCC AGAGTTTACTGACAG  56 102
    AHA_1156 NONE
    AHA_1155 1250490 .. 1250509 - -13.6  -3.21934   CCCTGGGGAGAAAAC            GGGATGCC CTGT GGCATCCC             TTGAATTTGATAGTA  87 103
    AHA_1154 1249043 .. 1249059 - -15.1  -5.28176   CCCAGCGACAAAAAA              GGGGCGC CAT GCGCCCC              TCGTTTCAGCTGTGC 100 47
         xni NONE
    AHA_1152 1246952 .. 1246967 - -10.4  -4.83243   GCGAGATAAAACAAA              GGGAGC CGAA GCTCCC               TTTAAAAATCAATAT 100 51
    AHA_1151 1246389 .. 1246414 - -19.1   -3.4252   CGCCACTGACCACAA         GGCCGACAACC CACG GGTTGTCGGCC          TTGTCATTTCTGCGC 100 43
    AHA_1144 1239372 .. 1239395 - -18.2  -2.59431   GTGCCGGATAAGCGA          CGGGCTGACC TGAT GGTCAGCCCG           TTTTTTTTGCAAAAG  95 43
    AHA_1134 NONE
    AHA_1133 NONE
    AHA_1132 1228911 .. 1228926 -    -6  -4.11404   GCCAGAGTATAGAAA              GGGGCG CCGG CGACCC               AGCGCGCGGGGTGGC  67 61
    AHA_1131 1226987 .. 1226997 -  -2.4   -3.9009   AATTCATCGGAGAAA                 CCAG CAC CGGG                 GAACTTTATTCGGAA  52 80
    AHA_1130 1226008 .. 1226025 - -12.7  -5.66684   CAAGCCATAAAAAAA             CCGGAGC AGCA GCTCCGG              TTTTTTGTATCCCTG 100 53
        panE NONE
    AHA_1127 1223499 .. 1223530 -   -26  -2.52464   GGTCCGCCCAACGCA      GAGCGCCCCTTGCC AATC GGCAAGGGGCGCTC       TGTTATTGCGAAAGG 100 46
    AHA_1124 1219946 .. 1219971 - -16.9  -4.09511   AATACGGTGCCAAAA         CCCCCATCAGC TTAT GCCGATGGGGG          TTTTTGTTTGTCTTT 100 40
    AHA_1114 1209114 .. 1209133 - -16.4  -4.44797   GCATGAATAGCAAAA            CGCCCCGG CATG CCGGGGCG             TTTTTTTATGTGCCG 100 49
        pheA 1189602 .. 1189620 -   -16  -4.09822   AATGGACGACAGAAA             GGCGACCC GAT GGGTCGCC             TTTTTCATTGGCGGT 100 76
    AHA_1089 1187125 .. 1187135 -  -3.2  -3.54475   GCGGGCATTATACAA                 GAAG CCG CTCC                 CTTTTAAACCATTGA  49 44
    AHA_1088 1186981 .. 1187023 - -13.5  -4.57569   GTACGGGGCCAAAAA CGACCAAGGGGTTGGCATC GTAAT GATGCCAACCCCTTGTTTT ATATGGCGCTCCCGA 100 29
    AHA_1087 1185772 .. 1185813 -  -4.1  -3.89346   TGTTGACGGCATAAA TGGCGACGCCCGGATTGGC TTGT GCCAGTCCGGGTGAGGTCG  TTATGCGGTTTGAAT  56 53
    AHA_1086 NONE
    AHA_1085 1183337 .. 1183349 -  -4.1  -3.51329   TACGGCCAATTACAA                CCAAC TTA GTTGA                TACTCGCCTTTTTGA  51 456
    AHA_1083 NONE
    AHA_1082 1182345 .. 1182364 - -13.6  -4.61873   TGGCAGAAATGAAAA            GAGGAGGC AAAT GCCTCCTC             TTGGATGGGAATGGA 100 47
    AHA_1081 NONE
    AHA_1080 1181241 .. 1181261 -  -2.5  -3.92522   TGGCAATGCCAGAAA            CAGCGAC GTTTGGG GTCGATG            CAGATCTCATCTCTC  54 274
    AHA_1079 1180122 .. 1180153 -   -19  -4.45117   GAGATTGTAAAGAAA      GTCACTGAATCAGA ATTT TCTGATTCAGTGAC       TTGTATCAAACTATC 100 105
    AHA_1078 1178025 .. 1178049 -  -3.5  -2.98282   AGCAACGACGAGATA         GGT-GCCGGG TTGCTC CCCGGCGATC          AGTTTGTGATGCAGC  44 139
    AHA_1077 1175383 .. 1175415 - -14.9  -3.01688   AAAATAATAGAATGA      TTTCCCCCAGACCAT AAA ATGGTCTGGGGGATG      GTGTCACGTGCGTTA  91 38
    AHA_1073 NONE
    AHA_1072 1164056 .. 1164098 - -14.2  -4.56597   GGGCGGGGCCAAAAA CGAGCAAGGGGTTGGCACCA TGA TGATGCCAACCCCTTGTTTT GTATGGCGTTCCCGA 100 127
    AHA_1071 1163597 .. 1163607 -  -6.8  -3.25223   GAGCTAGACCAGCAA                 CGGT CCG ACCG                 AGCTTGCGGTTTTCA  56 38
    AHA_1069 1160798 .. 1160835 -  -8.5  -3.53733   TTCACTTTATAAATA   CGATACGATGGGTTTCT TAGA AGAACCCAATCGTATTG    CCCCGCATGAATTTG  65 342
    AHA_1063 1147492 .. 1147520 -   -19  -3.30474   GCCTAGAACGAGCAA        GGGGTTGGCATC GTGAT GATGCCAACCCC        GGGATTCGGCAGACA 100 289
    AHA_1061 NONE
    AHA_1060 NONE
    AHA_1059 NONE
    AHA_1058 NONE
    AHA_1057 NONE
    AHA_1056 1140266 .. 1140294 - -21.1  -4.80178   GATGAATGAACAAAA        GGAGGGCCAGTCT AGC AGACCGGCCCTCC        CTGATGGCCATACCT 100 60
    AHA_1055 1139299 .. 1139321 - -15.6  -2.78384   GGCGCTTTTATGACA           GTCAGCCCGG CGG CCGGACTGAC           TGTCGAGGGGGCTGG  86 42
    AHA_1054 1137230 .. 1137249 - -10.7  -4.74406   ACAAAAAAAGATAAA            CCCCTGC GCGATG GCAGGGG             CCGGGTAGGGGGCGC 100 59
    AHA_1053 1135286 .. 1135313 - -15.6  -5.31275   GCTGATCAGAAAAAA        GAAAACCGGGCC AATC GGCCCGGTTTGC         TAACTTCAACCACCT 100 43
    AHA_1052 1134304 .. 1134322 -  -8.8  -2.87468   GGGGATGAGACGAGA             GGCGACGA CGC TCGTCGTC             ACTCCTTGTTCCTTG  62 88
    AHA_1051 1132869 .. 1132903 - -12.7  -3.25823   GCCCTCCCATATCAA     GACCCTGACGGGGCC GATGT GGCCCCGCCTGCGCC     TTATTGGCGGGCCTG  83 26
    AHA_1050 1132432 .. 1132448 -  -5.7  -2.94099   CGTCGTTATGAGACA              CGGCAGG CTC CCCGCAG              GTGGAATGAGCGGCC  51 163
    AHA_1049 NONE
    AHA_1048 1130192 .. 1130209 - -14.1  -4.72272   CGTTGCCATGAAAAA             CGGGGCC GCGA GGCCCCG              TTTGTTATCTGCTGG 100 55
    AHA_1046 NONE
    AHA_1045 1127413 .. 1127437 - -13.5  -3.36228   TCGATGAGAAACAGA          CCCGGCACCTG TTG CAGGCGGCGGG          CTTTGGCGTTGGTCG  77 108
    AHA_1040 1121782 .. 1121801 - -13.6  -4.43879   AGGAGGCAATGAAAA            GAGCCTGC ATTG GCAGGCTC             TTGGTGCTGTATGCG 100 46
    AHA_1039 1120298 .. 1120310 -  -2.7  -2.87132   TGTTTTGGCCATATA                TCTCT CCT AGAAA                AAAGTGACATCAGCG  42 19
    AHA_1038 NONE
        rsbV NONE
      cheA-1 NONE
    AHA_1035 NONE
      cheW-1 NONE
    AHA_1033 1112534 .. 1112547 -  -3.1  -3.60234   TGATACACGCGCAAA               CTC-CC TGC GGTGAG               CGAGATGCGGGTGAG  49 61
      cheR-1 NONE
    AHA_1031 NONE
      cheB-1 1110124 .. 1110144 -   -14  -4.55287   CGCATTGAGATAAAA            CAGCCCGG TTATG CCGGGCTG            TGTCGTTTCATATCT 100 51
    AHA_1028 NONE
    AHA_1027 NONE
    AHA_1026 1108202 .. 1108218 - -10.8   -4.4267   TGTGAAAAGCGAAAA              CCCGGC ACTGG GCCGGG              TTTTCTTGAATGATG  93 39
    AHA_1023 1103651 .. 1103665 -  -6.4  -4.61231   TGATATTGGTAAAAA               GGGTTA AAC CAACCC               TTTTTCTTTGGCATA  75 14
    AHA_1018 1097708 .. 1097724 -  -5.1  -4.56597   GTCGGCGGCCAAAAA              TGGGC GGTTCAG GCCCA              GCGAGAGAGGGGGGA  73 17
        yegQ NONE
    AHA_1016 1095785 .. 1095800 - -11.8  -4.70879   GCCAAACGTCAAAAA              GCCCCG TATG CGGGGC               TTTTTTTATGATGTT 100 97
    AHA_1010 1091484 .. 1091511 -   -12  -4.70879   TGGAAATGCCAAAAA        GCAAAGACGGCC CGCA GGCCGCCTTTGT         TTGTCATCGCAGGAA 100 49
    AHA_1009 1089714 .. 1089729 -  -3.3  -4.29106   CTGCACATTAATAAA              GCAAA TAAACG TTTGC               TCTATTTGGCAGAGC  62 111
    AHA_1008 1087704 .. 1087721 - -14.1  -4.86001   AGTATGCCATAAAAA             CGGCGCC CTCA GGCGCCG              TTGCAACAGCTTGTG 100 48
    AHA_1007 1087267 .. 1087295 -  -8.7  -2.62642   ATGACCAGCCACAAG        GGCCCGGGCTGTG AAG CAGATCCCGGGCA        AAGGTTTGTCGGCCT  59 46
    AHA_1006 1086799 .. 1086822 -  -8.8  -3.29144   CCATTGTTTGTACAA          GGGGC-CCCCG TCA CAGAGTGCCCC          TTGAGTCATGTTTGC  65 57
    AHA_1005 1085821 .. 1085852 - -17.2  -3.85698   CTCCCGGGGGATAAA      TGTGCGGGGCGGCC GATT GGCCGCCCCGCAGC       GTTTGTGGCGGTCGC 100 44
    AHA_1002 NONE
    AHA_1001 1082061 .. 1082077 - -15.1  -5.67063   CCGATGATAAAAAAA              CCCGCGC CTG GCGCGGG              TTTTTTTATGGCTGG 100 47
    AHA_0998 1080224 .. 1080236 -  -6.9  -3.14132   CCTTGTGGTTATTAA                CGACC ATT GGCCG                CAAAACTGGACTCAT  54 106
    AHA_0997 NONE
    AHA_0995 1077672 .. 1077708 -  -5.1  -3.44051   CCGTGAGCACGAGAA   CCTGACCCTGGC-CCG CCAGCT CGATGCCATGGCCAAG    CGGGACCCGCTGACC  53 502
    AHA_0994 1076583 .. 1076608 - -16.9  -5.18726   TGCTCACAATAAAAA         TGGCCCTCCGC CAGT GCGGAAGGCCA          TTTTTATTTTCTGAA 100 134
    AHA_0992 NONE
    AHA_0991 NONE
    AHA_0990 NONE
    AHA_0989 NONE
        arnT NONE
    AHA_0987 NONE
    AHA_0986 1067180 .. 1067197 - -12.7   -5.1287   CGCAGACGCAAAAAA             GGGCTGC GGTG GCAGCCC              TTGCGACAAGCAAAG 100 48
    AHA_0985 NONE
    AHA_0984 1065592 .. 1065612 -   -14  -3.40522   ATGGTGTGATGACAA            CGGCCTGC TCAAT GCAGGCCG            TTTTGCATATTGGGG  95 42
         crp 1063813 .. 1063828 - -10.4  -4.49981   GAGACGATCAGAAAA              GGCTGC CGTG GCAGCC               TTTTTTATCCGGCGA  93 68
    AHA_0980 1062910 .. 1062923 -  -9.5   -5.4505   CCGCGCAATAAAAAA               GGCCC GTCA GGGCC                TTTTTCATGGGGTGA 100 47
    AHA_0975 NONE
    AHA_0974 1050859 .. 1050876 - -12.7  -4.90869   ATCAGCAACGAAAAA             GGGGAGC CTCG GCTCCCC              TTGTTGCATGGTGAC 100 48
    AHA_0971 NONE
    AHA_0970 1045528 .. 1045544 -  -2.1   -3.2614   GAGCGGGCAGATTAA              CATGCCG GCT CGGGTTG              GGTGGCGCCGAGCAG  43 5
    AHA_0969 1045037 .. 1045058 - -17.3  -4.58466   GCCAGAATGACAAAA           CGGGCAGCC CTGG GGCTGCCCG            TTTTTTATGGACGGT 100 47
    AHA_0966 NONE
    AHA_0965 1041893 .. 1041903 -  -6.8  -3.61404   CGATGAAGCAGACAA                 GAGG AGT CCTC                 CGGTTAAAGCGTCCG  60 29
        hutD 1041061 .. 1041082 - -15.9  -4.41348   CGCCTTGCAAACAAA           CAGAGCGCC TGAT GGCGCTCTG            TTGCTATCTGCCGCA 100 47
    AHA_0962 1038750 .. 1038780 -  -3.1  -3.28712   CGCGGCTGCTGACAA       CCGACTGGCAGCA GGTGT CGCTGCCGCTCTG       GCTCGGCCTTGCCTA  46 281
    AHA_0957 1033783 .. 1033804 -  -2.8  -2.73364   TTTTTATCCTAAGGA           GGGAGGCG GCGAAG CGCCATCC            GATTAACTCATCAAT  41 36
    AHA_0956 1033410 .. 1033430 - -10.4  -3.39274   AACAAGGAGAGAAGA            GAAGGGCC TTGCT GGCCCCTC            AGACGTCGAGGTGAT  73 24
    AHA_0955 1033044 .. 1033058 -  -5.6  -3.48276   GGGGTTGCTAGATAA               GTTGCC CCT GGCCAC               CATCGGCACCATCGG  55 3
    AHA_0954 1031935 .. 1031946 -  -4.4  -2.79327   GGATCCTACCGAAAG                GCAA ACGG TTGC                 GCAAATGCGGGTGTG  45 76
      mtnN-1 1031020 .. 1031042 - -15.6  -4.73613   GGATTACCAAGAAAA           GAAGCCGCCA CAG TGGCGGCCTC           TTGGGTTCATCAGGC 100 35
    AHA_0950 1027807 .. 1027824 - -12.7  -4.30987   ATCGGGCACAAGAAA             GGGGAGC CTGG GCTCCCC              TTGTGGCATGTGCCG 100 112
    AHA_0949 1025753 .. 1025771 - -14.6  -5.28176   GTCAGCCATAAAAAA             TGCCCGTC ACT GACGGGCA             TTTTTGTTTGCGCTG 100 58
    AHA_0945 NONE
        surA 1019256 .. 1019275 -  -6.4  -2.62983   GTGATGGCTAGACGA            CGACAACT CATC AGCTGCCG             GCGCCTTCGATCTGG  49 16
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH 1016117 .. 1016139 -   -22  -5.31877   ATGCACCATAAAAAA           CGGGCCCGGC AAT GCCGGGCCCG           TTTTGTTTTATTGCC 100 145
    AHA_0937 1011139 .. 1011168 -  -5.7  -3.51934   GTGGTGTGATAAAGA       GTGA-GGGGGAG TCTATTG CTCCCCCTTCGC       TATAGGGGCACCGTT  57 97
    AHA_0936 1010712 .. 1010744 - -10.6  -2.87443   GTGAGACAAGAGAAG     GGCCGGC-CAGGA TTCGGGTT TCCCGTGCCGGCC      GTGAGGCGCGGATCA  68 38
    AHA_0935 1010306 .. 1010319 -  -9.5  -4.78149   GTGACAACGGAAAAA               GGGCC TGCG GGCCC                TTTTTCGTCAGCGTC  95 33
    AHA_0929 1003413 .. 1003442 - -18.1  -3.48276   GTGTTTGCCAGACAA       CAAAAAAGAGGCC CTTT GGCCTCTTTTTTG        TTGTCCGCCGATTGG 100 43
    AHA_0918 NONE
    AHA_0917  990398 ..  990455 - -20.7  -4.60889   AAGTAGGGTGAAAAA TGGGCGCTGAAAACACAAGAGGCCCGGC AAT GCCGGGCCTCTTGTGTTCACGACGGC-A TCATGCCGACTGGCG 100 26
        metN NONE
        metI NONE
        metQ  986879 ..  986897 -   -16  -6.15828   GGCAGCAAAAAAAAA             GGCCACGC ATT GCGTGGCC             TTTTTTGCCGAGTGA 100 45
        rfaH NONE
    AHA_0911  986104 ..  986153 - -25.9  -3.31144   GCCTGAGGCTGACAA GGGCCATAAAAACGGGGCAGGCC GCTG GGCCTGCCCCGTTTTTTTAGCCT CGCTGGTGCAAGAGA 100 86
    AHA_0904  972987 ..  973011 - -21.5  -2.90496   GGCCGTTGCAAATGA          CGAGGCCACCC ATG GGGTGGCCTCG          TTTGTTGGTGCGGGT 100 46
    AHA_0899  969290 ..  969310 - -12.5  -3.17075   CTGGCTGCAATGGAA            CGGGCCCCA TCA CGGGGCCCA            TTTTTGTTGCCGTGC  83 55
    AHA_0895 NONE
    AHA_0894  964681 ..  964700 -   -15  -5.80364   ATGCGAATAAAAAAA            GGGCCTGC ACTT GCAGGCCC             TTTCCATATGGGTAG 100 57
    AHA_0893  963788 ..  963803 - -11.8  -3.15861   CATGACTCGGACCAA              GGCGCC TCGC GGCGCC               TTTTTCATATCTATC  76 39
      ackA-1  961782 ..  961799 - -14.1  -4.30576   TTGGGATCAGGAAAA             GGCCGCC CTTG GGCGGCC              TTGCTCTACAGCGAA 100 42
    AHA_0890  959550 ..  959565 - -11.8  -5.96219   CAGCCATAAAAAAAA              CCCGCC AATT GGCGGG               TTTTTGAGGTCTCAT 100 53
      leuA-1 NONE
        leuB NONE
        leuC NONE
        leuD  948794 ..  948813 - -13.6  -4.77165   GGCCTGACAACAAAA            CAGGGAGC CGCG GCTCCCTG             TTGATTCTACTCGTT 100 58
    AHA_0878  947604 ..  947629 -    -9  -3.99374   GGCCACCAACAACAA         CCTGCTGCCCC CCTTC GAGGC-GCAGG         CCCGCATCATCCGGG  76 199
        thiB NONE
        thiP NONE
        thiQ NONE
    AHA_0873  943594 ..  943613 - -13.6  -4.72272   TCTTCGTATGAAAAA            GGGAAGCC AAGC GGCTTCCC             TTTTTTGATCCCGTC 100 46
    AHA_0864  929488 ..  929507 -  -9.2  -3.40403   TGTCTCGCATCAGAA            GGTGGGGG CAAG CCCCCATC             AGTTATGAGTAACCA  66 97
    AHA_0863  928753 ..  928775 - -14.9  -4.87291   GACCCTAACGAAAAA           GCCCCCATC CAGTC GATGGGGGC           TTTTTTATGTCTGCG 100 63
    AHA_0858  922209 ..  922233 -  -5.8  -3.61398   CTGGCTGCGCAACAA         GCTGGCCGA-CA AGC TGATCGGC-AGC         AACCAGTTCAAGATG  57 184
        aspA  919921 ..  919963 - -13.5  -4.37886   TTATTTGGCAGAAAA GCCAATTCCCGATGGGGCT GGGCA AGACCTATCGGGAACTGAC TTTATGGGCCGGGAT 100 62
    AHA_0855  918508 ..  918524 - -10.8  -5.28778   AGCAGGCATAAAAAA              CGGCCC GAACA GGGCCG              TTTGCGTGTTTGTGG 100 54
    AHA_0854  917229 ..  917247 - -17.4  -5.45652   ACGGGCAATAAAAAA             CCGGCCGC TGG GCGGCCGG             TAAAAAATACAGTAG 100 57
    AHA_0852  914888 ..  914907 -   -15  -3.10895   CGTAATAGAGATAGA            GCGCCGGA CTTG TCCGGCGC             TTTTTTTATGCGGAT  91 31
    AHA_0850 NONE
    AHA_0849  911554 ..  911579 - -20.5  -3.65224   ACCTCATCTGAAGAA         CGGGCCCGAAG GCAA CTTCGGGCCCG          TTTTTTTATGCCCGT 100 81
        rdgB  907786 ..  907804 - -13.8  -3.90112   GCGCCGCGAACGAAA             CGGGGGCC GAC GGCCCCCA             TTGTAGATGACAACG  93 58
    AHA_0845  906472 ..  906500 - -23.3  -4.21462   AGGCATCAGCTAAAA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTCTCTATTCGTTG 100 82
        purH  903101 ..  903119 - -17.4  -4.91357   AAAGAGACAACAAAA             GGGCCGCC GAC GGCGGCCC             TGATCCATCAGTGAC 100 33
        purD  901705 ..  901720 - -11.8   -3.3353   CGCCGGATAAAGAGA              GGGCCC TTGC GGGCCC               TGTTCATTACTGCTG  80 32
    AHA_0839 NONE
    AHA_0838  900527 ..  900544 - -14.1  -3.29558   GAAGAGCAATGAACA             GGGGCCC TGCA GGGCCCC              ATGAGTATTCAGGCG  95 34
    AHA_0837  897638 ..  897662 - -17.1  -5.26316   TGACGCCATAAAAAA          GGCCTCCCGCC GAT GGTGGGAGGCC          TGGTTCAGTGCTTCA 100 64
         gcp  891104 ..  891130 - -13.8  -4.45544   GCTTACCAAGTAAAA         CAAAAAGGGGCC AAA GGCCCCTTTTTC         ATGCTGGCAGGATCC 100 47
    AHA_0816  873562 ..  873574 -  -4.7  -4.82901   CCCGCGTCAGAAAAA                GCGGG TTG CCCGG                TTCAGGATAGATAGC  74 27
    AHA_0815 NONE
    AHA_0814  872050 ..  872085 - -16.2  -3.36327   GCACTCGATGGAGAA    TGCGAAAGAGGGACGC CGCG GCGTCCCTCTTTCGTG     GTTGGGGGCAAAGCT 100 40
    AHA_0812  869655 ..  869668 -  -5.2    -3.494   CAACTCCTTATACAA               CCGG GGTCAG CCGG                GAGTGGCTGGCGGGG  55 4
    AHA_0811 NONE
    AHA_0810  867967 ..  867978 -    -3  -3.08812   GCCCTTGCAACAAAC                TGAT TTCC ATCA                 CAATTGTCCTTAATC  43 39
    AHA_0809 NONE
    AHA_0808 NONE
    AHA_0807 NONE
      nagA-1 NONE
    AHA_0805 NONE
    AHA_0804  861748 ..  861765 - -12.7  -4.70583   GGTACGAAGAGAAAA             GGGACGC CACG GCGTCCC              TTTTTGTCAGCTCAA 100 53
        nadB  850945 ..  850974 - -18.7  -4.36914   CTCTTCCCCATAAAA       CAGATGACCCCGC CGGA GCGAGGTCATCTG        GGGGATGCGGATCGA 100 202
    AHA_0790  849203 ..  849234 - -15.8  -2.70932   GCGCTGGCTGAAGGA      GGCCCTGCTGGCGC GGGC GCGCTAGCAGGGCT       CTTCGCTTACTCGGT  86 32
    AHA_0788  847686 ..  847705 -  -4.2  -3.42354   GAGCTGAAGGCACAA            GCCTGAACG CCG CGG-CAGGC            CCGCCGGGCTTGTCC  51 107
        cutA NONE
        dsbD  845035 ..  845067 -   -17  -3.55203   AAAATGGCGGTCAAA     CCGGG-GGCCCGCAC GGTT GCACGGGCCACCCGG      CCTCAGCGCAGCTTC 100 28
    AHA_0784  844424 ..  844466 -  -4.1  -3.97674   GGAGCAGTCAAACAA TCAGCGT-CCGCCCATCC CGTGTGTT GAATGGGCTGCACGCCGG CTAGCGAGGGGGATA  58 91
    AHA_0773  829591 ..  829615 - -13.6  -5.14563   GCCGCGATGAAAAAA          GAAAGGCCCC TCGTG GGGGCCTTCC          AGTCTAACCAGATTG 100 155
    AHA_0772  829049 ..  829090 -  -5.1  -2.52464   CTGGCTGCCAATCTA GCACTGTCGGGCCCCCGCG TCACAG CGCGGGGGGC-GAGAA-GC ATGATCCGGCGGGAA  46 59
    AHA_0771  826095 ..  826112 - -14.1  -3.97511   GAGTGAATACAACAA             GGGGCGC CTCG GCGCCCC              TTCGGTTTATTCCCC 100 32
    AHA_0766 NONE
    AHA_0765 NONE
    AHA_0764 NONE
    AHA_0763 NONE
    AHA_0762  815517 ..  815538 -  -6.5  -5.44119   CTCATGCGAAAAAAA           GGCGCCACCC GAG GGG-AACGCC           TGAAAGGTCAAACCT 100 106
    AHA_0759  811294 ..  811323 -  -5.7  -2.64735   ACGCCACCCACAGCA       GCTGGCTCATCAT GATG ATGGTGAACCAGA        AGCCGAACAGGATCT  49 65
    AHA_0758  809925 ..  809942 -  -3.4  -3.48924   GGAGTTGGCAGACAA             GCCTGCT GTGGT AGC-GGC             CGACGATGTGGCTGC  49 166
    AHA_0748  800459 ..  800476 - -14.1  -3.30771   TTACAGTCGTGACAA             CGGGCGC CTGG GCGCCCG              TTGTGGATCCTGGCA  95 51
    AHA_0747  800020 ..  800035 - -11.8  -3.54029   TTTCATCAACGACAA              GGGCGC TGCG GCGCCC               TTTTCATTGCCGGTC  81 53
    AHA_0745  798100 ..  798114 -  -2.7  -3.56643   GTCACACTCTGCAAA               GCGGC GCCCT GGCGC               TGGCGATCTGCATGT  49 373
    AHA_0743  796123 ..  796143 -  -6.7  -2.57132   GGCCGCGGGCAGAAG            GCGCCGCCG GCT CAGCGGCAG            TGAAACACCTCCTCC  51 16
    AHA_0742  794741 ..  794754 -  -9.5  -6.20267   CGAAAAACAAAAAAA               CGCCC GACT GGGCG                TTTTTTATTGGCGGT 100 52
    AHA_0737  786627 ..  786656 - -20.9  -3.85698   TGCGCCGCCCATAAA       CAACCATGGCTCC CGCG GGAGCCATGGTTG        TTTATGGGGATGTCA 100 120
        xenB  784737 ..  784754 -  -9.8  -5.28778   AGCAGGCACAAAAAA             GGGCCC GGGAGG GGGCCC              AAACATTGGAAACCC 100 90
    AHA_0734  783635 ..  783654 - -11.4  -4.90778   GGCAGGCAAACAAAA            GGACGGCA TCGC TGCCGCCC             TTTTATCCTGAGCTG 100 46
    AHA_0732  782144 ..  782159 -  -7.5   -3.2963   ATCACCCGTCGACAA              GGGGG GTAATG CCCCC               TATAAAGGAGGCTGT  59 468
    AHA_0727  777042 ..  777065 -  -5.1  -3.21276   GGGTGTTCGACAACA          GCTGGCTGC TCGATT GCGGCCTGC           GCGGGCGCCTGCTGC  48 70
        rimI  772515 ..  772532 -  -8.4  -2.95298   GGCAGCGAGCACATA             CTGCGG CGCTTC CCGCAG              GTGGCGACGCCGCCC  55 261
    AHA_0722  770159 ..  770175 - -10.1  -4.96106   GACAAACAGCAAAAA              GCCGCTC TTG AAGCGGC              TTTTTTATTTCCCTG 100 70
    AHA_0716  762072 ..  762106 -  -2.8  -3.29096   CCCATCAACGAGCAA     TCCTCCATGCTG GGACTGATGAG CAGCCTGGCGGA     TGGGGTGGGAATGAG  46 481
    AHA_0714  760847 ..  760875 -   -14  -4.04206   CTACTGGTAGAGAAA       TGGACACAGGGGC CTCG GCCCCTGTGT-CA        GGGTAACGGGGATGA 100 44
        mntH  757335 ..  757378 - -16.8  -3.64599   CCAGCATACGCCAAA GCGCAGGCCGGCTCATTAAC CTCG GTTAACAAGCCGGCCTGAGG AGGGGATGGCGGGCT 100 39
    AHA_0708  756422 ..  756436 -  -2.7  -2.52543   AGGCTGCTTAAGGCA               TCCGG GCCGG CCGGT               CAGGGAGTGACCCGG  40 25
    AHA_0701  748936 ..  748973 - -16.5  -3.66178   TCCCGGAATGGCAAA   CATG-AAAAAGGCCGGTC AAT GACCGGCCTTTTTGCGTG   CTGACGGAATCAGGA 100 35
    AHA_0692  740567 ..  740588 -  -7.2  -3.17075   GCGGGCCGAAGCCAA           GGCCGCCT TGCTGG AGGCGGCG            CAATACATGGAGCGA  56 288
        rpsT  726388 ..  726403 -  -7.5   -5.7827   AACAGAAATAAAAAA              CCGGC ACGAAG GCCGG               TTTTTTTAGCTTTGT 100 56
        mutH  717323 ..  717335 -  -3.4  -4.16842   CTGATTGCGAAGAAA                TAGC TGCTG GCTA                TTTTTATATCACTTT  58 66
    AHA_0670  716915 ..  716933 -   -16  -4.20531   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTATCCGCT 100 56
    AHA_0664 NONE
    AHA_0663  710925 ..  710955 -   -17  -3.19091   AGAGCGAGTGAGCAA       GCAAAAAGGCTGCC AGT GGCAGCCTTTTTTC       AATCTTCAAAGCCAG 100 24
    AHA_0661  709057 ..  709084 -   -12  -5.47821   ACTGAGCCAAAAAAA        TGACCCACGGAT CTGC ATCCGTGGGCCG         GGAGGAGCCGGCCGC 100 90
        argR  703300 ..  703317 - -12.7  -5.24796   TGCAGATAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTTTTGGCT 100 67
    AHA_0648  697278 ..  697292 -  -2.8  -4.56597   GCGCTGTCGCAAAAA               CTGAAT TTC ATTCTG               TCATCCTCGGGCGTT  67 55
    AHA_0647  696609 ..  696625 - -13.7  -5.75342   TGCCGGCAAAAAAAA              GCGCCTC AGG GAGGCGC              GGGGAAAAGACAGAT 100 194
    AHA_0639  688388 ..  688405 -  -5.5  -3.05384   CTGTTGGTTAGGCAA             TGGGGCA TGGT TGCCCGA              TGTCGTTTTTCAGAG  50 48
    AHA_0638  688033 ..  688049 - -10.1  -5.60993   GCGGCCATAAAAAAA              CCGGAGC TGG ACTCCGG              TTTTGGCAAGGGTGA 100 50
    AHA_0637  686975 ..  686999 -  -3.5  -3.40597   TCGCTTAGCTAAATA          GTGCAAATGAA AGG TGCATCTGCGC          AGGCGGATGGCAAAG  49 106
    AHA_0636  684912 ..  684942 -  -9.7  -2.52464   TCTGTGCTGAAGCCA      CTGGCTGCCGGCCTG CAG CTGGCCGG-AGCC-G      CTCTGGCGGATCTCC  63 362
    AHA_0635 NONE
    AHA_0634  682715 ..  682725 -  -4.6  -3.21099   CCTCGCCATGACCAA                 CGAC GAT GCCG                 AATACCTCGACGAGA  48 269
    AHA_0631  679056 ..  679082 - -25.2  -3.83568   GCAGACTGACAACAA         TCCCGCCGGGGC ATG GCCCCGGCGGGA         TTTTTTTATGGAACA 100 42
        zntA  675856 ..  675874 - -17.4   -5.4833   CGAGGCAATAAAAAA             GCCGCCCC GTT GGGGCGGC             TGTTGGTTGTGCCGT 100 52
    AHA_0627  670942 ..  670969 - -15.6  -3.01712   TGGCCGCCCGCAACA        GCAGGAAGGGGC CAAG GCCCCTTCCTGT         TTTTCTGGCTCAGTG  93 35
    AHA_0625  669530 ..  669557 -  -8.2  -3.60792   GGCTCAAGTCTGAAA        GGGGCGGGGGCC GTGG GGCCGACGCCGC         CCAGCCGTCAACGGG  65 77
    AHA_0624  668216 ..  668233 - -14.1  -5.38054   CGGGACAAACAAAAA             GCCCCGC CTGA GCGGGGC              TTGCGGGGATCAGCC 100 35
    AHA_0623  667212 ..  667232 -  -3.2  -3.16982   TCTACACCAAGAAAC            CCTGACAC TCGCC ATGTCCGG            CCAGCATGTGCCGGG  45 52
    AHA_0617  658958 ..  658990 - -26.4  -3.05384   GCCGGCCTGATGCAA      CAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTG      TTGTCTGTCAGAGGA 100 94
    AHA_0614  654293 ..  654309 -  -2.1  -2.78384   GGGCCCTCGACCAGA              TGCGCCA GGA TGGCTCG              CTGGAGGCGCTGCGC  39 117
    AHA_0611  649623 ..  649657 - -31.6  -3.39895   TTTTTCATCAATGAA     GCACGCCCCCGTCAGC CGG GCTGACGGGGGCGTGC     GCTGCGACAGGGTAG 100 47
    AHA_0610  647788 ..  647808 - -18.3  -4.57353   GTGCATCAGAGAAAA            CGGGGAGCC AGT GGCTCCCCG            TTTTGTTGATGGTGT 100 58
    AHA_0603 NONE
    AHA_0602  639769 ..  639789 -  -3.1  -2.64616   GGGCGAGCCAGATCA            CAGGGCCAG CTC CCAGCCACG            GGGGGCGTCCGGGCT  40 2
    AHA_0601  639410 ..  639425 -  -3.9  -2.58579   GCAATGGCCGACAAT              CGGGC ACTGCG ACCCG               CGTCAGATCGTCTGC  42 28
    AHA_0600  639051 ..  639095 -  -9.2  -3.05596   GAGTGCGGGAGGGAA CGGCGGCAAACCCTTGCAGCC CGGG GGCTGGCCG-GTTTGCCGCCC GGCTTGCCGGATCAG  63 37
    AHA_0599  638385 ..  638398 -  -3.1  -4.76478   GAAAAGAAATTAAAA               GACAC ATTA GTATC                TAAAAATAGTTTTTA  70 72
    AHA_0598  636905 ..  636922 - -11.3  -5.70522   AATAAGAACAAAAAA             CGGCAAC CGAT GTTGCCG              TTTTATTCAATTTAC 100 93
        argE  629717 ..  629731 -  -4.2  -2.59748   TAGGGTGACAATCTA               CCCAGA TTG TCTGCG               CAAGGTCAAATAACA  44 117
         ppc  626917 ..  626946 - -20.9  -2.87132   CGTGCCCTGTAGATA       TGACAAAGGGCGC CGAG GCGCCCTTTGTCA        TTGAGGGGAGCTTGA 100 53
        metJ NONE
    AHA_0587  621359 ..  621385 - -10.8  -3.53012   GCCGTCTTCGGCAAA         CGGCCGCCCG GTTACGG CAAGCGGCCG         TTTTGCTGGCGCCAG  74 10
    AHA_0586  620899 ..  620924 - -19.1  -4.42806   CCAGCCGCAAATAAA         GAGAGGCGACC CTGG GGTCGCCTCTC          TTGTATCGGTCCGGT 100 48
    AHA_0582  616850 ..  616867 - -12.7  -3.35798   ACCCGGGATCGACAA             GGGCTGC CTGG GCAGCCC              TTTTGTTTATCCGTC  84 83
    AHA_0580  614563 ..  614588 - -20.5  -3.27298   GCTGGCAAGCATCAA         CACCACCCCGC CCCG GCGGGGTGGTG          TCGTTATGGGGGCGT 100 29
    AHA_0567  602234 ..  602244 -  -6.8  -2.52946   TGTCGTCATAAAAGG                 GCCA TCT TGGC                 GGGTCAATATTGCTT  51 29
        hslO  601233 ..  601249 - -10.8  -3.76952   GTTATTTAAGTTAAA              GGCGGG TTTTG CCCGCC              TTCAATTAGTGTAAC  80 31
        pckA  599428 ..  599452 - -16.5  -5.40072   CTCTGCTCAAAAAAA          TACCGGCCAGC TGG GCTGACCGGTA          TGAGATTGGCAGTAA 100 53
    AHA_0564 NONE
    AHA_0563  596756 ..  596773 - -12.7  -5.40072   CGGCGGGCAAAAAAA             CAGGGCC CGCG GGCCCTG              TTTCATCAGACAGCT 100 55
    AHA_0562  596221 ..  596242 -  -3.6  -4.65895   GGCGGCAGTCAAAAA           GGAGCCAC AGGGTA GTGGGCCC            GCCGGGCTGATGCAA  69 78
    AHA_0561  595689 ..  595699 -  -2.4  -3.56727   TGTAACCAATTATAA                 GGCC CGG GCCC                 CGCAAACCCTGTCAC  47 48
    AHA_0560  595070 ..  595088 -   -16  -5.80364   ATGGCAATAAAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTCATGGGCGGA 100 45
    AHA_0556  590390 ..  590410 -    -4  -3.19889   TATCAACAGAGGGAA            TTGAGAAG GGATG CTACTCAA            GTGGTGGCGGGAGAA  47 247
    AHA_0555  589446 ..  589460 -  -2.8  -3.54424   TTTTACCCCTCCAAA               GCCA AGGTGAA TGGC               CGGTTCAGCCGGGTT  49 30
         rnb  587301 ..  587317 - -13.7   -5.4505   TGGTCCAATAAAAAA              GCCCGCA GAG TGCGGGC              TTTTTACAAGGTGGG 100 51
    AHA_0553 NONE
    AHA_0552  585165 ..  585199 -  -3.6  -4.13304   AAATTAGGCTGAAAA    CGGGGTGTCTTGTGA CACAGC TCTCAA-ATACCCCG     ACCACCCCCCTCCCT  60 319
    AHA_0551 NONE
    AHA_0550 NONE
        mtlR NONE
    AHA_0548 NONE
    AHA_0547 NONE
    AHA_0546  578418 ..  578433 - -10.4  -4.54821   ACCGGAATGAGAAAA              GGCTCC TGCG GGAGCC               TTTTTTGAGCCTGCC  95 47
    AHA_0543  576305 ..  576325 -   -14  -3.27297   AGGTAGGAATGAATA            TCCCCGGC TGGAT GCCGGGGA            GGGGGTAATCAACTC  95 34
    AHA_0542  575913 ..  575933 - -15.4  -4.03234   GTGGCTCCATAGAAA            GGGCCGGC AGGAG GCCGGCCC            ATGGCCGGATTATTC 100 35
    AHA_0541  575314 ..  575336 -  -7.7  -5.15634   CATTGCAGCAAAAAA          CCGGG--GCCC GAT GGGCAGCCCGG          TCATTAACTGCGCGG 100 29
    AHA_0540  574683 ..  574700 - -12.7  -3.96148   TCTCTCCATGACAAA             CCCCTGC CTCG GCAGGGG              TTTGTTTTTTGGGGC  93 72
    AHA_0538  571472 ..  571500 - -18.9  -2.72745   GGCACGGATAAATAT        GAAACAGGCGCCG AAC CGGCGCCTGTGTC        GTGAACCTTAGCCCA 100 33
    AHA_0537  570805 ..  570815 -  -2.4  -3.14132   CTGGTGCGCCAGCAA                 CGGC TGC GCCT                 TTCTGGCGGTGGTGC  43 355
    AHA_0535  568830 ..  568861 - -20.2   -3.5394   AAAGGCGCGCTGAAA      CCAGGAGGGCTCCC GTGT GGGAGCCCTCCTTG       AGTGGCGGCTTGGTG 100 60
        menF  566033 ..  566054 -  -6.5  -4.52703   GAAACGATGAGAAAA           CGCTATCCC AGCA GGGAGAGCA            CGTTGGCGATCTTGT  75 6
        menD NONE
    AHA_0530 NONE
        menB NONE
        menC NONE
        menE NONE
    AHA_0526 NONE
    AHA_0525  558337 ..  558356 -    -5  -2.57564   CCATGGCCGGATAAT            CGACCA GCCCTGTG TGGTCG             CCCCCGAATCCCTTG  43 438
    AHA_0518  551005 ..  551017 - -10.5   -4.1899   GTATCGTAGTGAAAA                GCCGC CGG GCGGC                AGTTGGCATGGCAAC  86 187
    AHA_0517  547888 ..  547907 - -16.4  -2.83119   AATCGTTCATAAGCA            GGGGCGGC CATG GCCGCCCC             TTGTCATAGCCGTCT  90 46
    AHA_0516  546710 ..  546733 - -18.2  -3.91911   CCGAGCCCAATGAAA          GAGACCCGCC TGTT GGCGGGTCTC           TGCTATTGAGGGGTC 100 28
    AHA_0513  545458 ..  545479 - -13.7  -5.14477   GACAGATTCAAAAAA           GCCCTACCC ATAT GGGCAGGGC            TGTTGGCGGTGCCGG 100 46
    AHA_0512 NONE
    AHA_0511  543635 ..  543654 -   -15  -3.58162   GCAGTATCAAAGCAA            GGGGCCCA GATA TGGGCCCC             TTTTTATTTTGGTTA  95 50
    AHA_0507  540313 ..  540326 -  -2.4  -2.92463   GGTAGCAGTTATAGA               TGGA TAGACG TCCA                ATCTATCAGGCCCAG  40 127
    AHA_0506  538968 ..  538988 -   -14  -5.00616   CCGCTGGCCAAAAAA            GAGCGGGC TGGAT GCCCGCTC            CTGCGTTGACTGACT 100 40
    AHA_0505  538216 ..  538234 - -10.2   -5.9873   CGAGCAGAAAAAAAA             CGCCCCGA TCA TTGGGGCG             TTTTGCATGGTGTCA 100 56
    AHA_0503  536025 ..  536045 -    -9  -5.46657   CACGGCAACAAAAAA           GGGAG-GGC GGCT GCCACTCCC            TTGTTGACCGGACGG 100 72
    AHA_0501  533465 ..  533484 - -13.6  -4.93877   GCTGACGAAATAAAA            GAGGCTCC CAAG GGAGCCTC             TCTGTTTTGGTGGCC 100 44
    AHA_0497 NONE
    AHA_0496  529698 ..  529716 - -11.7  -5.06414   GGTTGGCAACAAAAA             GGGCTCC GTGAT GGAGCCC             TTTTTCATGGGGGAA 100 42
    AHA_0492  523209 ..  523224 - -11.8  -5.24129   GCCTCCTACAAAAAA              CCCGCC AATC GGCGGG               TTTTGTTTTATTGCG 100 42
    AHA_0490  522023 ..  522034 -  -5.8  -3.44527   TACCTATCAGCAGAA                CTCG CCGT CGAG                 GTAGGGACTGGCTCA  56 38
    AHA_0488 NONE
    AHA_0487 NONE
    AHA_0483 NONE
    AHA_0482  512415 ..  512430 - -11.8  -4.34402   GGCCGGATAGCAAAA              GGGGCC CGCA GGCCCC               TGGTCGTGTCAGGCG  93 34
    AHA_0481  511171 ..  511195 -  -4.3  -3.16564   CCTCTATCGCAGCAA         CGGCATGGTG TTTGGC CAC-ACGCCG          GATCACATCCAGCGC  47 137
    AHA_0479  509209 ..  509221 -  -2.7  -2.69042   ACAGCATGAAATGCA                TCTCT GGT AGAAA                GCCTGAGCCGCCATG  40 46
    AHA_0478  508342 ..  508372 -  -2.2  -2.80935   AGGTGAGCGATGAGA       CCCACGCCCTGCTG GCC CGGCTGGCCGAGCG       CTACCCGCTGGTGGT  39 452
    AHA_0472 NONE
    AHA_0471  502779 ..  502798 -   -15  -4.44548   CATATCGAATGAAAA            CGGCCTGC ATCT GCAGGCCG             TTTGGCTATCCGCGG 100 46
        hemC NONE
        hemD NONE
    AHA_0467 NONE
    AHA_0466  495886 ..  495905 -   -15  -5.10208   CAATCCCAATAAAAA            GAGGCCGC AACT GCGGCCTC             TTTTTATTTCGTGAC 100 50
    AHA_0463  493023 ..  493050 - -19.8  -4.18494   GACGGGGATGCAAAA        GAGCGCGCCGGC ATCA GCCGGCGCGCGC         AGTGCAGAGGGGCCC 100 44
    AHA_0462  491838 ..  491851 -  -2.3  -2.77344   TGACTCTTGAAGAAG               CGACC TGAT GGTCT                GAACTTATTGATTTA  39 214
    AHA_0461  489726 ..  489749 - -16.8  -4.82901   GGTGCTTCATAAAAA          TCTGGCCAGC TGAA GCTGGCCAGA           GGGATCGGGAAAAGG 100 47
    AHA_0460  489081 ..  489106 -  -6.1  -3.53012   TTTGCCGTCGGTAAA         CGCGCTAG-AGC AGG GCCACCAGCACG         GTGACCAGGGCGCCC  57 4
    AHA_0459 NONE
    AHA_0458  487141 ..  487162 - -15.9  -4.77567   ACCCCCATAACAAAA           CAGGCGACC CGCA GGTCGCCTG            TTGCCGTTAGCCGGC 100 32
    AHA_0456  486568 ..  486582 -  -8.5  -3.12351   CTGGCGCAGAGCGAA               GCGGG GGCGG CCCGC               GAGGAGCCCCATCTC  58 52
    AHA_0454  485732 ..  485748 -  -6.5  -3.12351   CTGGCGGATATCGAA              CCGGACA ATC TGCCCAG              CCAGCGGCTGTTTCG  53 97
    AHA_0452  483744 ..  483763 -   -15  -4.78149   CGCACAAGTCAAAAA            GGGCGACC CATG GGTCGCCC             TTTTTCTTGGTGTTG 100 44
    AHA_0449  480368 ..  480393 -  -3.2   -3.1247   ACCGTTCAGACTCAA         TGTGGTCAAG TGGTTG CCCGACCTCA          ATGGCGATCAGCCTG  43 60
    AHA_0448  479842 ..  479871 - -20.9  -3.62597   GCGACCGTTCAAGAA       GAGGGTTGAGTGC CTGT GCACTCAACCCTC        TTCTCATTCCAGTCC 100 53
    AHA_0446  477869 ..  477881 -  -6.3  -3.42996   CAGCATGCATTAGAA                CAATC TTG GATTG                AGGAAGTTACTGATG  57 503
    AHA_0436 NONE
    AHA_0435  463192 ..  463213 - -15.9  -3.61652   GGTTGAAACAATGAA           CAAGGCGCC CTCG GGCGCCTTG            TTGTTTTTACTCCCG 100 32
    AHA_0431  455072 ..  455089 - -12.7  -4.82901   TGTCGGCCACAAAAA             GGGCTCC CGAG GGAGCCC              TTTTTCATCACCAGG 100 58
    AHA_0430  454417 ..  454440 -  -5.2  -4.23674   CGGGAGTAAGACAAA          GAGGCCGC CGTGAGTT GCGGCCTG           TCTGCATCGGGCGCT  69 59
    AHA_0427 NONE
    AHA_0426  451457 ..  451483 - -22.4   -4.7629   CCATGAATGGAAAAA         GGGCCGGATCCT GTC AGGATCCGGCCC         TTCTTTTGGGCGTCT 100 39
    AHA_0423  450021 ..  450046 - -12.5  -3.14051   CCAGTTGCAGCAACA         GGGCCAGCCGC TGTC GCGGATAGCCC          TCGAACTGGGTTACG  81 68
    AHA_0422 NONE
    AHA_0421 NONE
    AHA_0420 NONE
    AHA_0419 NONE
    AHA_0417 NONE
    AHA_0416  440539 ..  440557 - -13.1  -4.81551   CAGCCATATGAAAAA             GCCCCGC ACTGG GCGGGGC             TCGGAATGGTTCAGG 100 36
    AHA_0415 NONE
    AHA_0414  439315 ..  439334 - -16.4  -5.10461   GTCAGCCAATAAAAA            GCCCCGGC AAGG GCCGGGGC             TGCAGATACGGGGCT 100 44
        murQ NONE
        murP NONE
    AHA_0411  435440 ..  435457 - -14.1  -5.05505   AGCAGAAAGCAAAAA             GCCGGCC GACT GGCCGGC              AGGGGATCAGAACTC 100 32
    AHA_0410  434768 ..  434785 - -12.7  -5.36441   TGCCGATAGAAAAAA             CCACCCG CTTG CGGGTGG              TTTTTTTATGGGCCA 100 49
    AHA_0384  403818 ..  403843 - -19.1  -3.20723   GCCTGATGAATGCAA         GAGAGGGTCGC CTGG GCGACCCTCTC          TTTTTGTGGTTCAGC 100 91
    AHA_0382  399693 ..  399709 -  -7.9  -3.24329   GACGGGTAAGGAACA              GGGTGGC GGC GCCACAC              GAGGTGGCGCGCCTG  59 120
    AHA_0381  398500 ..  398518 -   -16  -4.77165   CCGCCCATAACAAAA             GACCGCCC ATC GGGCGGTC             TTTGCGTTTCTGGCG 100 52
    AHA_0370  385650 ..  385676 -  -4.2  -2.64155   CGTTGTCCAAATTGA         CGGGGAGGGGCA CCG CGCCCATCTCCC         CCCTTTAAACCGCAG  44 30
    AHA_0369  385209 ..  385234 -  -8.4  -5.00884   AGCGTGGGGAAAAAA         GAGAAGGAGTG ACCAG CACTCCTTC-C         AGAACCACCATGACA  95 50
    AHA_0366  382899 ..  382916 - -12.7  -4.82901   CCGTGCCCAGAAAAA             GACCGCC GATT GGCGGTC              TTTTTCTTTGTTCAG 100 56
    AHA_0361  377533 ..  377555 - -13.4  -3.94773   GGCCAACAGAAAAGA           CACGGGGCTC GAC GAGCCCCGTT           TTTTTGCCTGTGAGC 100 82
    AHA_0358  375054 ..  375087 -  -3.9  -3.71672   CCCCACGAAAATTAA    TCG-CT-CGCCCTGC CTCAGC GCAGGGTGAAGTCGA     TGTCCTCGCCCGCGC  53 6
    AHA_0355 NONE
    AHA_0354  371036 ..  371051 - -11.8  -5.71712   GTGCAGACAAAAAAA              CGGGCC CTCA GGCCCG               TTTTGCTATTCCATT 100 52
    AHA_0352  370010 ..  370021 -    -3  -2.62933   CAAGGTGGCACATCA                TGAT ATCC ATCA                 CCGGGAGGGATTATT  40 36
    AHA_0351  369842 ..  369892 - -17.6  -3.40403   GTGGTGCGAGCATAA CCAGGGTCAATGAAAACGGCGCCA TCA TGGCGCCGTTTTCATGCTCCCCGC TGGGGGCTTATTCCT 100 33
    AHA_0344 NONE
    AHA_0343 NONE
        kefB  358212 ..  358226 -  -2.8  -3.03441   GAGCATGGGGTAATA               GGCAAT CAT ATTGCT               TCCTTGTCGTTGTCG  43 16
    AHA_0341  357700 ..  357715 -    -4  -5.05782   ATCGAGGCTAAAAAA              TGATGA AAAT TCACCA               AATGAAAGTGCTGTC  77 144
    AHA_0340  356505 ..  356533 - -16.1  -3.80746   TGCTCAAAAAGAATA        CAAAAAGCCGGGC TTT GCCCGGCTTTTTT        TCTGAGGTGGTCAGC 100 36
    AHA_0307  334166 ..  334187 - -14.5   -3.3782   GATTGATTGAACGAA           GGGCGTATC CGTG GATACGCCC            TTTGCATGTCAGGCT  95 34
        greB  331344 ..  331371 -  -2.6  -2.53903   CCCGGCAAAAACGAC        GCTTGTCATACCC GGT GGGCG-GACATGC        TCGGTCTCTCCTGGC  38 78
    AHA_0303  328816 ..  328829 -  -9.5  -5.30686   AACAGCGACAAAAAA               GCCCC GCGA GGGGC                TTTTTGCATTCCGGG 100 44
    AHA_0298 NONE
        gntY  325066 ..  325087 - -18.7   -4.3208   CCGCAGAATGCAAAA           GGCCCCGCC AGCT GGCGGGGCC            TTTTCTTTGCCGCAT 100 64
        gpmI NONE
        yibP  319857 ..  319873 - -12.3  -5.14563   GCGGCGATCAAAAAA              GCCTGCA TGA TGCAGGC              TTTTCTGGATGGCAG 100 63
    AHA_0290  317985 ..  318008 - -18.2  -3.33696   CCGTTTGCCAAGCAA          GCAGGCCACC CTCG GGTGGCCTGC           TCTGTTCTGGTTGTA 100 58
    AHA_0286  313356 ..  313373 -  -8.4  -4.96106   CATAAAGATGAAAAA             GGCCTC ACATTG GAGGCC              TTTTTCCGGACGGTT  95 45
        pssA  311832 ..  311868 - -25.4  -3.33162   GAGCTGAGCCCACAA    TGACAAAGGCCTGCCG ATGTG CGGCAGGCCTTTGTCA    TGATCCCTGAGAGCG 100 54
        recG NONE
    AHA_0283  307398 ..  307428 - -20.6  -3.14132   GCTGGTTCCCATCAA       GCAACAAGGCCTCA TCA CGAGGCCTTGTTGC       TTTCTGTCGGTTAGC 100 36
    AHA_0280  305394 ..  305407 -  -9.5  -2.57013   CCTCAACGTAAGCCA               GGCCG GCGG CGGCC                TGTTGGTGGTCTCCC  56 235
        glnA  300446 ..  300461 - -11.8  -5.39721   CTATCAGAGAAAAAA              CCCGCC TGTC GGCGGG               TTTGGTCAAGTTCTG 100 56
    AHA_0276  299773 ..  299789 - -10.9  -3.26545   GCTATACACCAGCAA              TGCACCA ATG TGGTGCA              TTTAGTCTACCCGTA  71 54
        glnL NONE
        ntrC  297174 ..  297203 -  -9.3  -5.05782   AGGGATCTCAAAAAA       GATACCCCGTTTG AAAT CAAACGGGGTCTT        ATTGGTCGGTGATTT 100 76
       add-1  296065 ..  296094 - -16.7  -4.07885   GATGTCGTTGGAAAA       TAAAAAAACCGCC GAGA GGCGGTTTTTTTA        TTGGGCTTGGCTGCA 100 42
        engB  291304 ..  291345 -  -5.8  -3.74158   GCAAGCAGACTGAAA GCCTTTCAATCAGCGGAG GAGCTG CTCCGCCAATTGCAGGGT  TTGGTTGTGGTGTAT  60 53
         def NONE
         fmt NONE
         sun  280873 ..  280894 - -11.5  -3.14344   GATGTTGGGCAGTAA           TGGGTGCCG CAAG CGGCACCCG            TCGTGATGATGGCCC  72 44
        trkA  279323 ..  279358 - -11.2  -4.42386   CGTTGATTGACAAAA    GACCCGG-ACAATCCCT GGT AGAGGCTGTGCCGGGTC    TGGGTTGTGCTGCCT  93 56
    AHA_0254  277773 ..  277797 - -20.1  -3.81146   TCGCTCAAGCAACAA          GAAGGGCAGCC ACT GGCTGCCCTTC          TGCATTTCTTCGTCT 100 78
    AHA_0251  275492 ..  275527 - -20.6  -3.10905   GCATAAGCCAGGCAA    GCATGACAAAGGGGCC CACG GGCCCCTTTGTCATGT     CCGGGATTCGGGCTC 100 39
    AHA_0244  268058 ..  268097 - -10.7  -3.53091   ATCCGGCGGGGCAAA  CCGCTCCG-CAAGCGCGG GCCGT CGGCGCCTGCCGAAGCAG  AGGCCGGCGCGAAGG  74 93
    AHA_0243  266392 ..  266407 -  -3.2  -3.50447   CCAATTCGCAGATAA              GCGTCA TTTC TGATGC               TATTCGAGCTGGATC  49 25
    AHA_0242  266023 ..  266053 -    -2  -2.78508   GATGCGGGAAAACAT      CGCAAAA-AATCA GTGTAG CGATCCTTTTGCG       GGGAAAGAAGTTAAT  39 80
      rarD-1 NONE
    AHA_0240 NONE
    AHA_0239  263419 ..  263442 - -16.8    -3.827   AATAATGAACGTAAA          GAGGGATGGC CTGG GCCATCCCTC           TTTTTTATGGCTGGC 100 50
    AHA_0237  257573 ..  257604 -   -13   -3.2794   GCCGAGCCAGAGTAA      CGCTCCCC-CCGCGA TTG CCACGATGGGGAGCG      ACCATTTTCGATTCA  83 167
    AHA_0236  256467 ..  256489 - -19.2  -4.15044   GTGCTTGCCAATAAA           CAACGGGGGC TTG GCCCCCGTTG           TTGTTATCGATGGCT 100 47
    AHA_0233 NONE
    AHA_0232  253311 ..  253329 -  -6.7  -3.25823   CGCCGGTCACAGCAA            GGTGG-GC AGCT GCTCCACC             AATTTTGGCGGCGCC  55 194
    AHA_0230  251821 ..  251848 - -18.4   -3.3907   TGAAAGGGGAAGCAA        GCGGCCCCGTGC GGGC GCACGGGGCCGG         AAGTGAGCGTCTTGC 100 63
    AHA_0229 NONE
    AHA_0228  250695 ..  250717 - -17.8  -4.91109   TGCCCAGCATAAAAA           GAGCCTGCCA CTG TGGCAGGCTC           TGTCGTTTTCGGGGT 100 54
    AHA_0226  249612 ..  249640 -  -8.8  -4.18303   AGGAGAAATCAGAAA       CCCGGCC-CTGACG GGG CG-CGGTGGCCGGG       TGAATTGTAAAGAGT  80 64
    AHA_0225 NONE
    AHA_0223 NONE
    AHA_0222 NONE
    AHA_0221  243981 ..  244003 -  -7.7  -3.17941   ATCATATCGCATCAA           GCCAGGG TCAATTTTC CCCTGGC           TTTGATATGAATACA  59 80
    AHA_0219  240310 ..  240327 - -14.1  -4.91573   AAAAGAGACTAAAAA             CCGGCCC GTGC GGGCCGG              TCGTTGGGTTGAGAG 100 54
    AHA_0218 NONE
    AHA_0217 NONE
    AHA_0216  236487 ..  236504 - -14.1   -5.4505   TCGCTCAATAAAAAA             GGCCCGC ATGT GCGGGCC              TTTTGCATGGCAAGG 100 47
    AHA_0214 NONE
    AHA_0213  233406 ..  233424 -   -16  -5.67063   CCGAGCAGAAAAAAA             CAGGCCCG TTA CGGGCCTG             TTTCGATCAGAGGTG 100 32
    AHA_0211  230100 ..  230122 - -19.2  -5.24129   GGTCCGGATAAAAAA           GAGGGAGGCC ATG GGCCTCCCTC           TTTCGTTTGCTGCCT 100 43
    AHA_0197  213862 ..  213889 - -16.4   -3.8969   GTAGCTATATAAGAA        GAGAAGCCCGGCA TGA TGCCGGGCTTC-C        TGTTTGTGGTGGCGG 100 45
    AHA_0195  209979 ..  210001 - -20.6   -4.3208   CGCGAGAATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTGGGTACGG 100 49
        cpxR NONE
        cpxA  204328 ..  204350 - -10.5  -4.08767   CTGATGGGGCGAAAA           GGGCGCCAG CATAC CCAGCGCCC           GTGCGGATGAAAAGA  86 47
    AHA_0188  203499 ..  203528 -  -4.2  -2.52464   GCCGCCGCCAACGCA       CAGCTGCCGTGGC TCATC GCCATGCC-GCTG       CTGGCGGTCTGGTGC  41 330
    AHA_0185  201061 ..  201108 -  -3.5  -4.68593   GGCAGCAGGGAAAAA CAACAGCCTC-GTG-C-GGTGTGC AGC GCACACCTGGCAAAGAGGCGCTTG CGGGATAGAAGGGAG  72 469
        plsB  197527 ..  197543 - -13.7   -5.1861   CCCATCATGAAAAAA              GGCCGCA TGT TGCGGCC              TTTTTTATGGTGTTG 100 52
      fliL-1  195480 ..  195517 - -16.4  -4.11216   TTTTCATTTCTAAAA   CAGCGAGCGGGCCAGGA TGATC TCGTGGCCCGCTCG-TG   GTGACGGGAGATTAC 100 37
    AHA_0178  194786 ..  194808 - -20.6  -3.10344   CGCGTATTGAATACA           CAGGCGGGCC TCG GGCCCGCCTG           TTTTTTTGGGCGGCT 100 470
    AHA_0173  191850 ..  191865 -  -3.9  -3.67597   GGCGCCACTCAATAA              CGCGC CAGGAT GCGCA               AGATGTCGTCTTTGC  53 3
    AHA_0172  191485 ..  191503 -  -8.1  -3.16267   TCCAAGCAGATGGAA            GCGG-CGG CTCA CCGGCCGC             CCAGACAGTCGCAAA  62 45
        ulaA  190161 ..  190179 -   -16  -5.72616   ACGGATATAAAAAAA             CGGAGCGC ATG GCGCTCCG             TTTTTTTATGTCGTG 100 52
    AHA_0168  186674 ..  186698 - -20.1  -2.66748   GATGATGTAAATGCA          GACAGGGCCCT TGA AGGGCCCTGTC          TCGTATGAGGGGAAG 100 50
        coaD  184874 ..  184895 - -14.5  -3.72576   GGCCCCTGCAGCAAA           CAGGCTACC CTCG GGTAGCCTG            TTTCGTTGTTACTTG  95 34
       coaBC NONE
         dut  179278 ..  179297 -  -2.1  -2.71967   CTAAAAAAAACAATG            GCCTGAT TCTGTT ATTAGGC             ACCGCCGCGCGGGCT  39 52
        slmA  178580 ..  178603 -  -8.8  -5.24129   TTGTGCCACAAAAAA          CAAGGGAGGC CAAG GCCTCCCTCT           TTACTGCAACCCGTC 100 80
    AHA_0156  177588 ..  177618 - -14.9  -3.53224   CAGCGGGGTCGGAAA      CGACAATGCCAGCC CGGA GGCTGGCATTGT-G       TCATTCAGGAAAAGG  95 42
         pgi  175207 ..  175227 - -18.3  -5.24129   CCCGGCCACAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 52
        ilvY  172292 ..  172332 -  -7.3  -2.70932   TGTCTCGCCCAAGTA  CCCGGAACTGGCCAAGCGC ATC GAGCTCGGCCTGCAGCGAG  CCCGTCAGTCCGGTG  52 202
    AHA_0150  171253 ..  171263 -  -6.8  -3.05844   GGTGCCAGTGTAATA                 CGCT TTC AGCG                 CCGGTTCTGTGACCG  54 49
    AHA_0149  168600 ..  168627 - -14.4  -4.21194   TTTTATTATCTAAAA        TCAGCGATTTAT GGTC ATAAATCGCTGA         TTTCTCTGCTTTATG 100 36
    AHA_0140  156793 ..  156816 -   -14   -4.5774   GATTAACAACCAAAA          TAAAGGCGTC TGAT GACGCCTTTA           TTAACCTTGTGTGGC 100 42
        fadB NONE
        fadA  153102 ..  153123 - -15.1  -5.63517   CGTGCAAATAAAAAA           GGCCGACCC AAAC GGGCCGGCC            AATACGCAGATTCCG 100 200
    AHA_0137  152162 ..  152178 -  -5.8  -3.11634   CGCGACAGCAGGGAA             CGGG-GC ACCA GCGCCCG              CCAGAACCACCTGGT  52 98
    AHA_0136 NONE
    AHA_0135  149456 ..  149488 - -21.5  -3.33315   CCAATACTTTCACAA      CGACAAAGGCGGATA TCT CATCCGCCTTTGTCG      TTTCTGGCCGCAGCA 100 48
    AHA_0133 NONE
    AHA_0132  148220 ..  148243 - -19.6  -4.84527   CGCAGACATGAAAAA          GGCCCCGCCA GCGA TGGCGGGGCC           CTTTTATTGGTGCCG 100 243
    AHA_0130  145195 ..  145212 - -12.7  -3.84017   CAAGGTCAAAGAGAA             GGGAGGC TGAT GCCTCCC              TTTTGCATATCGGCA  90 61
        glyQ NONE
        glyS  141334 ..  141351 - -14.1  -5.64006   ATTCAATTAAAAAAA             CGGCGCC TTTC GGCGCCG              TTTTTGATCTAGCCA 100 52
    AHA_0125 NONE
    AHA_0124  138729 ..  138746 - -14.1    -5.252   GACTGCGACAAAAAA             CGGCGCC TGAT GGCGCCG              TTTTTTATGATGCAG 100 62
    AHA_0118  131095 ..  131119 -  -7.8  -2.52464   TGGGCCCTGAATGGA         CGCCTCAGGCC TTGA GGCC-GAGCCG          CTTGGCGAGGCGGTG  53 5
    AHA_0116 NONE
    AHA_0115  127080 ..  127099 -   -15  -4.92757   CCATCAACAAGAAAA            CCCCCTCG CCAG CGAGGGGG             TTTTTGTTTGGCCCG 100 44
    AHA_0113  124457 ..  124476 - -13.6  -3.18452   CCCGCAAAGAAAGGA            GGGGTGAC TCAT GTCACCCC             GACCGGCAGATTATT  87 36
    AHA_0112 NONE
        livM NONE
        livG NONE
    AHA_0109 NONE
    AHA_0107 NONE
    AHA_0106 NONE
    AHA_0105  117882 ..  117900 - -11.6  -5.06414   GTCGGCCAATAAAAA             CGCCGCCC TCG GGGTGGCG             TTTTGTTTTCCAGCA 100 127
    AHA_0103  114843 ..  114867 - -18.7  -4.07877   GCAGGCCAGAAACAA          CAAACCCCAGC CTG GCTGGGGTTTG          CTTTATGGGCGACCT 100 44
    AHA_0097 NONE
    AHA_0096  106471 ..  106487 -  -6.6  -3.91911   GCCAGCCCAATGAAA              TCAAGG GTCAG CCTTGA              ACGGCGCCAGTCATG  65 106
    AHA_0095  105049 ..  105082 - -19.7  -4.42653   ACGCGAGGGATAAAA     GAAGAGGGCCAACCC GATG GGGTTGGCCCTCTTG      CCATCTATTGGCTGT 100 325
    AHA_0076   84004 ..   84035 - -14.4  -2.96722   CCCAGACCCAGAAAC      TGACAGCCCCCTTG CAAG CTTGGGGGCTGTCA       TCACTCGAAGAGGTC  86 68
    AHA_0072 NONE
    AHA_0071   78784 ..   78801 - -12.7  -4.56597   TCTGGTTGGCAAAAA             GAGCCGG CAAG CCGGCTC              AGAATTTTTCGGGTC 100 24
      purE-1 NONE
        purK   77064 ..   77084 - -14.7  -4.50193   AGCAAGCAATGAAAA            GACCCGGAC CTG GCCCGGGTC            TTTTTTATGCGCGGC 100 48
    AHA_0065   72554 ..   72578 -  -8.6  -4.43309   GAACCGGAATGAAAA          TGAAGGCATG ACGGG CATGCCTTCC          TGGATGGTCAACCGT  83 33
        matB   67124 ..   67139 - -11.8  -3.59979   TCCTGTGATTGCAAA              GGGCCC CGCA GGGCCC               CGAATACTATGCGTC  81 48
    AHA_0061   66393 ..   66414 -  -2.1  -3.68435   TTCGGCAAAACAACA           CCGCCACTC GACC GGGTGGTGA            AGGCAGTACCAGCAC  50 48
    AHA_0060 NONE
    AHA_0059 NONE
    AHA_0058   61355 ..   61388 -  -7.3  -2.73364   TGTCGACTTCAACTA     CGCCCACACCTGG GTCTCCTA CCTGGTGCTGGCG      AGCATGCTGGAGGCC  52 237
    AHA_0056   59181 ..   59208 -  -6.9  -2.81547   GGTGGATACCAACGA        GCTCTCCTCCA AGACCA TGGAGGCGCGC         AAGGTGGCCGGTCTC  49 327
    AHA_0053   55150 ..   55172 -  -7.7  -3.14132   CGCGGCGTGCACGAA           GGCTGCATC GAGCA GATGCAGCG           GCTGTTCGCCACCAA  56 306
    AHA_0051   53209 ..   53228 - -13.6   -4.2693   AAGGGATGAAAACAA            TGACCGCC TCTC GGCGGTCA             CGGTGTTTTCTTTGG 100 146
      trpS-1   51628 ..   51679 -  -2.3  -3.31144   GCGGGAGCTGGAGAA GGGGGAGCTG-GATCTGGTGATCGGC TTC GCCGATG-CCA-ATCACCTCTCGCCC CGGCTGTGGCGCGAA  45 490
    AHA_0048 NONE
    AHA_0047   49952 ..   49968 - -15.1  -5.60993   GCTGGCATAAAAAAA              CCGGCGC AGA GCGCCGG              TAGAAGGGACAAATC 100 111
    AHA_0045   48068 ..   48091 -  -6.6  -3.29263   ACACTGCCGGTAGAA          GAGCGGAACG GCAC CGATCCCCTC           ACCGGGCTGGAGAGC  55 477
    AHA_0042   45586 ..   45602 -  -2.1  -2.64616   GCGTCACCCACATCA              GCCGCCA TTC TGCCTGC              CACCGTGCGGGTGGG  38 60
    AHA_0041 NONE
        rpoZ   44341 ..   44368 - -15.6  -3.32294   GTAAATGGGGGAGAA        CAGTCGGCACCC GGGC GGGCGCCGACTA         TAAGAAATAACTGAC 100 41
    AHA_0039   42102 ..   42128 -  -8.7  -4.07568   CTTGTCTCTTGAAAA        GCAGCAGGCGGC TTGC GCCGCCTG-TGG         TCAGTTTTTCTGTCG  80 26
    AHA_0038 NONE
    AHA_0037 NONE
    AHA_0036   39403 ..   39432 - -12.9  -3.95584   GGGTTACGAATGAAA       GCGGGAGCAGT GTACAGCA ACCGCTCCCGC        TACCCCATTTATTTA  93 64
    AHA_0035   38266 ..   38295 -  -4.2  -2.53213   GAACGGGTGAAGCGA       GCCTGC-GCCC TGGGCTTGG GGGCCGCGGGC       GGCTATGCCTGCGCC  41 295
    AHA_0030   31508 ..   31541 - -21.1  -4.25104   CTGTTGCGAGGAAAA     TGCACAAGGGTGGCC GACG GGCCACCCTTGTGCT      GAACGGGGATCAGTG 100 35
       pyk-1   30386 ..   30402 -    -8  -4.19506   AGCTGAACCTGAAAA              GCCTCA TCTGG TGAGGC              ATCAGGCCAACCTGG  77 27
    AHA_0023 NONE
    AHA_0022 NONE
    AHA_0021   24147 ..   24169 - -19.2  -4.84359   TTAGCGTGATAAAAA           CAAGGCCCCG AAA CGGGGCCTTG           TTGATTAGGAACGGT 100 43
    AHA_0020   22072 ..   22096 - -12.2  -3.88291   CATGATGGGGATAAA         GCGGCTGGCTC ACAA GAGCCAGC-GC          TCAGTTATGTTGGAT  86 26
         gor   20621 ..   20636 - -11.8  -5.14563   GCCGCGATCAAAAAA              CCCGGC CTAG GCCGGG               TTTGGTAGCAAGTTG 100 60
    AHA_0018 NONE
        kdpA NONE
        kdpB NONE
        kdpC   15955 ..   15968 -  -9.5  -2.75481   CCCGAACGGCAAGGA               GCGCC CTCA GGCGC                CCTTTTGATGATCGA  64 18
    AHA_0014 NONE
    AHA_0013   12206 ..   12219 -  -5.2  -4.15222   AGCCTGCTCAACAAA               CGCC TGCTGG GGCG                TGGCTGGTCGCCTGC  65 361
    AHA_0010   10451 ..   10463 -  -4.7  -3.09273   CTGGCGCAAGAGATA                GCGGC CCA GCAGC                AGCAGGCCTCCCATG  47 68
        avtA    8759 ..    8784 - -19.1  -4.06419   GCGCGCGATAAACAA         GAGAGGCCTGC ATGT GCAGGCCTCTC          TGTTTTTGTATCGCC 100 50
    AHA_0006    6810 ..    6825 -    -6  -2.78384   TCCTTGCTGATGAGA              TGGCGC ATCG GCGCCG               ACCCCGTCAGCATGG  50 53
    AHA_0005    6323 ..    6341 - -11.7  -5.36441   GCTCGATATAAAAAA             GCCGCTC CCTGT GAGCGGC             TTTTTTTTTCTGGCG 100 93
