##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM1480v1
#!genome-build-accession NCBI_Assembly:GCF_000014805.1
##sequence-region NC_008570.1 1 4744448
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=380703
NC_008570.1	RefSeq	region	1	4744448	.	+	.	ID=id0;Dbxref=ATCC:7966,taxon:380703;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;note=type strain of Aeromonas hydrophila subsp. hydrophila ATCC 7966;strain=ATCC 7966;sub-species=hydrophila
NC_008570.1	RefSeq	gene	223	1593	.	+	.	ID=gene0;Dbxref=GeneID:4490513;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AHA_0001
NC_008570.1	RefSeq	CDS	223	1593	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:YP_854527.1,GeneID:4490513;Name=YP_854527.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;protein_id=YP_854527.1;transl_table=11
NC_008570.1	RefSeq	gene	1677	2780	.	+	.	ID=gene1;Dbxref=GeneID:4490514;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AHA_0002
NC_008570.1	RefSeq	CDS	1677	2780	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:YP_854529.1,GeneID:4490514;Name=YP_854529.1;Note=identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=YP_854529.1;transl_table=11
NC_008570.1	RefSeq	gene	2783	3886	.	+	.	ID=gene2;Dbxref=GeneID:4490515;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AHA_0003
NC_008570.1	RefSeq	CDS	2783	3886	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:YP_854530.1,GeneID:4490515;Name=YP_854530.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611;gbkey=CDS;gene=recF;product=DNA replication and repair protein RecF;protein_id=YP_854530.1;transl_table=11
NC_008570.1	RefSeq	gene	3883	6294	.	+	.	ID=gene3;Dbxref=GeneID:4490516;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AHA_0004
NC_008570.1	RefSeq	CDS	3883	6294	.	+	0	ID=cds3;Parent=gene3;Dbxref=Genbank:YP_854532.1,GeneID:4490516;Name=YP_854532.1;Note=identified by similarity to SP:P06982%3B match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=YP_854532.1;transl_table=11
NC_008570.1	RefSeq	gene	6409	6786	.	-	.	ID=gene4;Dbxref=GeneID:4490517;Name=AHA_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0005
NC_008570.1	RefSeq	CDS	6409	6786	.	-	0	ID=cds4;Parent=gene4;Dbxref=Genbank:YP_854533.1,GeneID:4490517;Name=YP_854533.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_854533.1;transl_table=11
NC_008570.1	RefSeq	gene	6853	7557	.	-	.	ID=gene5;Dbxref=GeneID:4490518;Name=AHA_0006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0006
NC_008570.1	RefSeq	CDS	6853	7557	.	-	0	ID=cds5;Parent=gene5;Dbxref=Genbank:YP_854534.1,GeneID:4490518;Name=YP_854534.1;gbkey=CDS;product=transcriptional regulator;protein_id=YP_854534.1;transl_table=11
NC_008570.1	RefSeq	gene	7792	8205	.	+	.	ID=gene6;Dbxref=GeneID:4490519;Name=AHA_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0007
NC_008570.1	RefSeq	CDS	7792	8205	.	+	0	ID=cds6;Parent=gene6;Dbxref=Genbank:YP_854535.1,GeneID:4490519;Name=YP_854535.1;Note=identified by match to protein family HMM PF00011;gbkey=CDS;product=16 kDa heat shock protein A;protein_id=YP_854535.1;transl_table=11
NC_008570.1	RefSeq	gene	8298	8735	.	+	.	ID=gene7;Dbxref=GeneID:4490520;Name=AHA_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0008
NC_008570.1	RefSeq	CDS	8298	8735	.	+	0	ID=cds7;Parent=gene7;Dbxref=Genbank:YP_854536.1,GeneID:4490520;Name=YP_854536.1;Note=identified by match to protein family HMM PF00011;gbkey=CDS;product=16 kDa heat shock protein A;protein_id=YP_854536.1;transl_table=11
NC_008570.1	RefSeq	gene	8809	10059	.	-	.	ID=gene8;Dbxref=GeneID:4490521;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AHA_0009
NC_008570.1	RefSeq	CDS	8809	10059	.	-	0	ID=cds8;Parent=gene8;Dbxref=Genbank:YP_854537.1,GeneID:4490521;Name=YP_854537.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate transaminase;protein_id=YP_854537.1;transl_table=11
NC_008570.1	RefSeq	gene	10343	10576	.	+	.	ID=gene9;Dbxref=GeneID:4490522;Name=AHA_0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0011
NC_008570.1	RefSeq	CDS	10343	10576	.	+	0	ID=cds9;Parent=gene9;Dbxref=Genbank:YP_854538.1,GeneID:4490522;Name=YP_854538.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854538.1;transl_table=11
NC_008570.1	RefSeq	gene	10506	11330	.	-	.	ID=gene10;Dbxref=GeneID:4490523;Name=AHA_0010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0010
NC_008570.1	RefSeq	CDS	10506	11330	.	-	0	ID=cds10;Parent=gene10;Dbxref=Genbank:YP_854539.1,GeneID:4490523;Name=YP_854539.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_854539.1;transl_table=11
NC_008570.1	RefSeq	gene	11423	12550	.	+	.	ID=gene11;Dbxref=GeneID:4490524;Name=AHA_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0012
NC_008570.1	RefSeq	CDS	11423	12550	.	+	0	ID=cds11;Parent=gene11;Dbxref=Genbank:YP_854540.1,GeneID:4490524;Name=YP_854540.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=multidrug resistance protein D;protein_id=YP_854540.1;transl_table=11
NC_008570.1	RefSeq	gene	12555	13238	.	-	.	ID=gene12;Dbxref=GeneID:4490525;Name=AHA_0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0013
NC_008570.1	RefSeq	CDS	12555	13238	.	-	0	ID=cds12;Parent=gene12;Dbxref=Genbank:YP_854542.1,GeneID:4490525;Name=YP_854542.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=KDP operon transcriptional regulatory protein KdpE;protein_id=YP_854542.1;transl_table=11
NC_008570.1	RefSeq	gene	13269	15857	.	-	.	ID=gene13;Dbxref=GeneID:4490526;Name=AHA_0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0014
NC_008570.1	RefSeq	CDS	13269	15857	.	-	0	ID=cds13;Parent=gene13;Dbxref=Genbank:YP_854543.1,GeneID:4490526;Name=YP_854543.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF02702;gbkey=CDS;product=sensory kinase in two-component regulatory system wtih KdpE;protein_id=YP_854543.1;transl_table=11
NC_008570.1	RefSeq	gene	15961	16488	.	-	.	ID=gene14;Dbxref=GeneID:4490527;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AHA_0015
NC_008570.1	RefSeq	CDS	15961	16488	.	-	0	ID=cds14;Parent=gene14;Dbxref=Genbank:YP_854544.1,GeneID:4490527;Name=YP_854544.1;Note=identified by match to protein family HMM PF02669%3B match to protein family HMM TIGR00681;gbkey=CDS;gene=kdpC;product=K+-transporting ATPase subunit C;protein_id=YP_854544.1;transl_table=11
NC_008570.1	RefSeq	gene	16549	18606	.	-	.	ID=gene15;Dbxref=GeneID:4490528;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AHA_0016
NC_008570.1	RefSeq	CDS	16549	18606	.	-	0	ID=cds15;Parent=gene15;Dbxref=Genbank:YP_854545.1,GeneID:4490528;Name=YP_854545.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01497;gbkey=CDS;gene=kdpB;product=K+-transporting ATPase subunit B;protein_id=YP_854545.1;transl_table=11
NC_008570.1	RefSeq	gene	18662	20344	.	-	.	ID=gene16;Dbxref=GeneID:4490529;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AHA_0017
NC_008570.1	RefSeq	CDS	18662	20344	.	-	0	ID=cds16;Parent=gene16;Dbxref=Genbank:YP_854546.1,GeneID:4490529;Name=YP_854546.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpA;product=potassium-transporting ATPase subunit A;protein_id=YP_854546.1;transl_table=11
NC_008570.1	RefSeq	gene	20355	20432	.	-	.	ID=gene17;Dbxref=GeneID:4490530;Name=AHA_0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0018
NC_008570.1	RefSeq	CDS	20355	20432	.	-	0	ID=cds17;Parent=gene17;Dbxref=Genbank:YP_854547.1,GeneID:4490530;Name=YP_854547.1;gbkey=CDS;product=K+-transporting ATPase%2C F subunit KdpF;protein_id=YP_854547.1;transl_table=11
NC_008570.1	RefSeq	gene	20671	22020	.	-	.	ID=gene18;Dbxref=GeneID:4490531;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=AHA_0019
NC_008570.1	RefSeq	CDS	20671	22020	.	-	0	ID=cds18;Parent=gene18;Dbxref=Genbank:YP_854548.1,GeneID:4490531;Name=YP_854548.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01421;gbkey=CDS;gene=gor;product=glutathione-disulfide reductase;protein_id=YP_854548.1;transl_table=11
NC_008570.1	RefSeq	gene	22097	24094	.	-	.	ID=gene19;Dbxref=GeneID:4488982;Name=AHA_0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0020
NC_008570.1	RefSeq	CDS	22097	24094	.	-	0	ID=cds19;Parent=gene19;Dbxref=Genbank:YP_854549.1,GeneID:4488982;Name=YP_854549.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_854549.1;transl_table=11
NC_008570.1	RefSeq	gene	24187	27267	.	-	.	ID=gene20;Dbxref=GeneID:4488983;Name=AHA_0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0021
NC_008570.1	RefSeq	CDS	24187	27267	.	-	0	ID=cds20;Parent=gene20;Dbxref=Genbank:YP_854550.1,GeneID:4488983;Name=YP_854550.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=acriflavin resistance plasma membrane protein;protein_id=YP_854550.1;transl_table=11
NC_008570.1	RefSeq	gene	27283	28389	.	-	.	ID=gene21;Dbxref=GeneID:4488984;Name=AHA_0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0022
NC_008570.1	RefSeq	CDS	27283	28389	.	-	0	ID=cds21;Parent=gene21;Dbxref=Genbank:YP_854551.1,GeneID:4488984;Name=YP_854551.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=RND efflux transporter;protein_id=YP_854551.1;transl_table=11
NC_008570.1	RefSeq	gene	28422	29045	.	-	.	ID=gene22;Dbxref=GeneID:4488985;Name=AHA_0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0023
NC_008570.1	RefSeq	CDS	28422	29045	.	-	0	ID=cds22;Parent=gene22;Dbxref=Genbank:YP_854552.1,GeneID:4488985;Name=YP_854552.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_854552.1;transl_table=11
NC_008570.1	RefSeq	gene	29246	29322	.	+	.	ID=gene23;Dbxref=GeneID:4488986;Name=AHA_0024;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0024
NC_008570.1	RefSeq	tRNA	29246	29322	.	+	.	ID=rna0;Parent=gene23;Dbxref=GeneID:4488986;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	29246	29322	.	+	.	ID=id1;Parent=rna0;Dbxref=GeneID:4488986;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	29373	29448	.	+	.	ID=gene24;Dbxref=GeneID:4488987;Name=AHA_0025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0025
NC_008570.1	RefSeq	tRNA	29373	29448	.	+	.	ID=rna1;Parent=gene24;Dbxref=GeneID:4488987;gbkey=tRNA;product=tRNA-His
NC_008570.1	RefSeq	exon	29373	29448	.	+	.	ID=id2;Parent=rna1;Dbxref=GeneID:4488987;gbkey=tRNA;product=tRNA-His
NC_008570.1	RefSeq	gene	29469	29554	.	+	.	ID=gene25;Dbxref=GeneID:4488988;Name=AHA_0026;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0026
NC_008570.1	RefSeq	tRNA	29469	29554	.	+	.	ID=rna2;Parent=gene25;Dbxref=GeneID:4488988;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	29469	29554	.	+	.	ID=id3;Parent=rna2;Dbxref=GeneID:4488988;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	29628	29704	.	+	.	ID=gene26;Dbxref=GeneID:4488989;Name=AHA_0027;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0027
NC_008570.1	RefSeq	tRNA	29628	29704	.	+	.	ID=rna3;Parent=gene26;Dbxref=GeneID:4488989;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	exon	29628	29704	.	+	.	ID=id4;Parent=rna3;Dbxref=GeneID:4488989;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	gene	29998	30399	.	+	.	ID=gene27;Dbxref=GeneID:4488990;Name=AHA_0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0028
NC_008570.1	RefSeq	CDS	29998	30399	.	+	0	ID=cds23;Parent=gene27;Dbxref=Genbank:YP_854553.1,GeneID:4488990;Name=YP_854553.1;Note=identified by match to protein family HMM PF00652;gbkey=CDS;product=ricin-type beta-trefoil lectin domain-containing protein;protein_id=YP_854553.1;transl_table=11
NC_008570.1	RefSeq	gene	30404	31483	.	-	.	ID=gene28;Dbxref=GeneID:4488991;Name=pyk-1;gbkey=Gene;gene=pyk-1;gene_biotype=protein_coding;locus_tag=AHA_0029
NC_008570.1	RefSeq	CDS	30404	31483	.	-	0	ID=cds24;Parent=gene28;Dbxref=Genbank:YP_854554.1,GeneID:4488991;Name=YP_854554.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk-1;product=pyruvate kinase;protein_id=YP_854554.1;transl_table=11
NC_008570.1	RefSeq	gene	31551	32888	.	-	.	ID=gene29;Dbxref=GeneID:4488992;Name=AHA_0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0030
NC_008570.1	RefSeq	CDS	31551	32888	.	-	0	ID=cds25;Parent=gene29;Dbxref=Genbank:YP_854555.1,GeneID:4488992;Name=YP_854555.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=sugar phosphate permease;protein_id=YP_854555.1;transl_table=11
NC_008570.1	RefSeq	gene	33247	34461	.	+	.	ID=gene30;Dbxref=GeneID:4488993;Name=AHA_0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0031
NC_008570.1	RefSeq	CDS	33247	34461	.	+	0	ID=cds26;Parent=gene30;Dbxref=Genbank:YP_854556.1,GeneID:4488993;Name=YP_854556.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=Fe3+ ABC transporter periplasmic protein;protein_id=YP_854556.1;transl_table=11
NC_008570.1	RefSeq	gene	34458	36890	.	+	.	ID=gene31;Dbxref=GeneID:4488994;Name=AHA_0032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0032
NC_008570.1	RefSeq	CDS	34458	36890	.	+	0	ID=cds27;Parent=gene31;Dbxref=Genbank:YP_854557.1,GeneID:4488994;Name=YP_854557.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=phosphoglycerate transport regulatory protein PgtB;protein_id=YP_854557.1;transl_table=11
NC_008570.1	RefSeq	gene	36874	38151	.	+	.	ID=gene32;Dbxref=GeneID:4488995;Name=AHA_0033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0033
NC_008570.1	RefSeq	CDS	36874	38151	.	+	0	ID=cds28;Parent=gene32;Dbxref=Genbank:YP_854558.1,GeneID:4488995;Name=YP_854558.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=C4-dicarboxylate transport transcriptional regulatory protein DctD;protein_id=YP_854558.1;transl_table=11
NC_008570.1	RefSeq	gene	38203	38517	.	+	.	ID=gene33;Dbxref=GeneID:4488996;Name=AHA_0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0034
NC_008570.1	RefSeq	CDS	38203	38517	.	+	0	ID=cds29;Parent=gene33;Dbxref=Genbank:YP_854559.1,GeneID:4488996;Name=YP_854559.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854559.1;transl_table=11
NC_008570.1	RefSeq	gene	38565	39377	.	-	.	ID=gene34;Dbxref=GeneID:4488997;Name=AHA_0035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0035
NC_008570.1	RefSeq	CDS	38565	39377	.	-	0	ID=cds30;Parent=gene34;Dbxref=Genbank:YP_854560.1,GeneID:4488997;Name=YP_854560.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;product=Cof family hydrolase;protein_id=YP_854560.1;transl_table=11
NC_008570.1	RefSeq	gene	39471	40511	.	-	.	ID=gene35;Dbxref=GeneID:4488998;Name=AHA_0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0036
NC_008570.1	RefSeq	CDS	39471	40511	.	-	0	ID=cds31;Parent=gene35;Dbxref=Genbank:YP_854561.1,GeneID:4488998;Name=YP_854561.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=lysophospholipase L2;protein_id=YP_854561.1;transl_table=11
NC_008570.1	RefSeq	gene	40508	41173	.	-	.	ID=gene36;Dbxref=GeneID:4488999;Name=AHA_0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0037
NC_008570.1	RefSeq	CDS	40508	41173	.	-	0	ID=cds32;Parent=gene36;Dbxref=Genbank:YP_854562.1,GeneID:4488999;Name=YP_854562.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=chloramphenicol acetyltransferase;protein_id=YP_854562.1;transl_table=11
NC_008570.1	RefSeq	gene	41173	41934	.	-	.	ID=gene37;Dbxref=GeneID:4489000;Name=AHA_0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0038
NC_008570.1	RefSeq	CDS	41173	41934	.	-	0	ID=cds33;Parent=gene37;Dbxref=Genbank:YP_854563.1,GeneID:4489000;Name=YP_854563.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA guanosine-2'-O-methyltransferase;protein_id=YP_854563.1;transl_table=11
NC_008570.1	RefSeq	gene	42129	44246	.	-	.	ID=gene38;Dbxref=GeneID:4489001;Name=AHA_0039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0039
NC_008570.1	RefSeq	CDS	42129	44246	.	-	0	ID=cds34;Parent=gene38;Dbxref=Genbank:YP_854564.1,GeneID:4489001;Name=YP_854564.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=YP_854564.1;transl_table=11
NC_008570.1	RefSeq	gene	44384	44659	.	-	.	ID=gene39;Dbxref=GeneID:4490260;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AHA_0040
NC_008570.1	RefSeq	CDS	44384	44659	.	-	0	ID=cds35;Parent=gene39;Dbxref=Genbank:YP_854565.1,GeneID:4490260;Name=YP_854565.1;Note=promotes RNA polymerase assembly or stability%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_854565.1;transl_table=11
NC_008570.1	RefSeq	gene	44739	45593	.	-	.	ID=gene40;Dbxref=GeneID:4490261;Name=AHA_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0041
NC_008570.1	RefSeq	CDS	44739	45593	.	-	0	ID=cds36;Parent=gene40;Dbxref=Genbank:YP_854566.1,GeneID:4490261;Name=YP_854566.1;Note=identified by match to protein family HMM PF00625;gbkey=CDS;product=guanylate kinase;protein_id=YP_854566.1;transl_table=11
NC_008570.1	RefSeq	gene	45637	46719	.	-	.	ID=gene41;Dbxref=GeneID:4490262;Name=AHA_0042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0042
NC_008570.1	RefSeq	CDS	45637	46719	.	-	0	ID=cds37;Parent=gene41;Dbxref=Genbank:YP_854567.1,GeneID:4490262;Name=YP_854567.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;product=lipopolysaccharide heptosyltransferase;protein_id=YP_854567.1;transl_table=11
NC_008570.1	RefSeq	gene	46888	47601	.	+	.	ID=gene42;Dbxref=GeneID:4490263;Name=kdkA;gbkey=Gene;gene=kdkA;gene_biotype=protein_coding;locus_tag=AHA_0043
NC_008570.1	RefSeq	CDS	46888	47601	.	+	0	ID=cds38;Parent=gene42;Dbxref=Genbank:YP_854568.1,GeneID:4490263;Name=YP_854568.1;Note=catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position;gbkey=CDS;gene=kdkA;product=3-deoxy-D-manno-octulosonic-acid kinase;protein_id=YP_854568.1;transl_table=11
NC_008570.1	RefSeq	gene	47729	48535	.	+	.	ID=gene43;Dbxref=GeneID:4490264;Name=AHA_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0044
NC_008570.1	RefSeq	CDS	47729	48535	.	+	0	ID=cds39;Parent=gene43;Dbxref=Genbank:YP_854569.1,GeneID:4490264;Name=YP_854569.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensory box/GGDEF family protein;protein_id=YP_854569.1;transl_table=11
NC_008570.1	RefSeq	gene	48543	49397	.	-	.	ID=gene44;Dbxref=GeneID:4490265;Name=AHA_0045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0045
NC_008570.1	RefSeq	CDS	48543	49397	.	-	0	ID=cds40;Parent=gene44;Dbxref=Genbank:YP_854570.1,GeneID:4490265;Name=YP_854570.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=YP_854570.1;transl_table=11
NC_008570.1	RefSeq	gene	49441	49899	.	+	.	ID=gene45;Dbxref=GeneID:4490266;Name=AHA_0046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0046
NC_008570.1	RefSeq	CDS	49441	49899	.	+	0	ID=cds41;Parent=gene45;Dbxref=Genbank:YP_854571.1,GeneID:4490266;Name=YP_854571.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854571.1;transl_table=11
NC_008570.1	RefSeq	gene	50054	50215	.	-	.	ID=gene46;Dbxref=GeneID:4490267;Name=AHA_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0047
NC_008570.1	RefSeq	CDS	50054	50215	.	-	0	ID=cds42;Parent=gene46;Dbxref=Genbank:YP_854572.1,GeneID:4490267;Name=YP_854572.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854572.1;transl_table=11
NC_008570.1	RefSeq	gene	50200	51129	.	-	.	ID=gene47;Dbxref=GeneID:4490268;Name=AHA_0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0048
NC_008570.1	RefSeq	CDS	50200	51129	.	-	0	ID=cds43;Parent=gene47;Dbxref=Genbank:YP_854573.1,GeneID:4490268;Name=YP_854573.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=YP_854573.1;transl_table=11
NC_008570.1	RefSeq	gene	51191	52165	.	+	.	ID=gene48;Dbxref=GeneID:4490269;Name=AHA_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0050
NC_008570.1	RefSeq	CDS	51191	52165	.	+	0	ID=cds44;Parent=gene48;Dbxref=Genbank:YP_854574.1,GeneID:4490269;Name=YP_854574.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_854574.1;transl_table=11
NC_008570.1	RefSeq	gene	52144	53157	.	-	.	ID=gene49;Dbxref=GeneID:4490270;Name=trpS-1;gbkey=Gene;gene=trpS-1;gene_biotype=protein_coding;locus_tag=AHA_0049
NC_008570.1	RefSeq	CDS	52144	53157	.	-	0	ID=cds45;Parent=gene49;Dbxref=Genbank:YP_854575.1,GeneID:4490270;Name=YP_854575.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=trpS-1;product=tryptophanyl-tRNA synthetase II;protein_id=YP_854575.1;transl_table=11
NC_008570.1	RefSeq	gene	53349	53783	.	-	.	ID=gene50;Dbxref=GeneID:4490271;Name=AHA_0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0051
NC_008570.1	RefSeq	CDS	53349	53783	.	-	0	ID=cds46;Parent=gene50;Dbxref=Genbank:YP_854576.1,GeneID:4490271;Name=YP_854576.1;Note=identified by match to protein family HMM PF00582;gbkey=CDS;product=universal stress protein A;protein_id=YP_854576.1;transl_table=11
NC_008570.1	RefSeq	gene	54250	55437	.	+	.	ID=gene51;Dbxref=GeneID:4490272;Name=AHA_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0052
NC_008570.1	RefSeq	CDS	54250	55437	.	+	0	ID=cds47;Parent=gene51;Dbxref=Genbank:YP_854577.1,GeneID:4490272;Name=YP_854577.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=YP_854577.1;transl_table=11
NC_008570.1	RefSeq	gene	55453	57243	.	-	.	ID=gene52;Dbxref=GeneID:4490273;Name=AHA_0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0053
NC_008570.1	RefSeq	CDS	55453	57243	.	-	0	ID=cds48;Parent=gene52;Dbxref=Genbank:YP_854578.1,GeneID:4490273;Name=YP_854578.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM PF07721%3B match to protein family HMM TIGR00254;gbkey=CDS;product=hypothetical protein;protein_id=YP_854578.1;transl_table=11
NC_008570.1	RefSeq	gene	57348	57977	.	+	.	ID=gene53;Dbxref=GeneID:4490274;Name=AHA_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0054
NC_008570.1	RefSeq	CDS	57348	57977	.	+	0	ID=cds49;Parent=gene53;Dbxref=Genbank:YP_854579.1,GeneID:4490274;Name=YP_854579.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;product=ferritin;protein_id=YP_854579.1;transl_table=11
NC_008570.1	RefSeq	gene	58135	59322	.	+	.	ID=gene54;Dbxref=GeneID:4490275;Name=AHA_0055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0055
NC_008570.1	RefSeq	CDS	58135	59322	.	+	0	ID=cds50;Parent=gene54;Dbxref=Genbank:YP_854580.1,GeneID:4490275;Name=YP_854580.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00275;gbkey=CDS;product=hypothetical protein;protein_id=YP_854580.1;transl_table=11
NC_008570.1	RefSeq	gene	59510	60730	.	-	.	ID=gene55;Dbxref=GeneID:4490276;Name=AHA_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0056
NC_008570.1	RefSeq	CDS	59510	60730	.	-	0	ID=cds51;Parent=gene55;Dbxref=Genbank:YP_854581.1,GeneID:4490276;Name=YP_854581.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=YP_854581.1;transl_table=11
NC_008570.1	RefSeq	gene	60918	61556	.	+	.	ID=gene56;Dbxref=GeneID:4490277;Name=AHA_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0057
NC_008570.1	RefSeq	CDS	60918	61556	.	+	0	ID=cds52;Parent=gene56;Dbxref=Genbank:YP_854582.1,GeneID:4490277;Name=YP_854582.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=leucine export protein LeuE;protein_id=YP_854582.1;transl_table=11
NC_008570.1	RefSeq	gene	61600	62346	.	-	.	ID=gene57;Dbxref=GeneID:4490278;Name=AHA_0058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0058
NC_008570.1	RefSeq	CDS	61600	62346	.	-	0	ID=cds53;Parent=gene57;Dbxref=Genbank:YP_854583.1,GeneID:4490278;Name=YP_854583.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854583.1;transl_table=11
NC_008570.1	RefSeq	gene	62289	63905	.	-	.	ID=gene58;Dbxref=GeneID:4488596;Name=AHA_0059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0059
NC_008570.1	RefSeq	CDS	62289	63905	.	-	0	ID=cds54;Parent=gene58;Dbxref=Genbank:YP_854584.1,GeneID:4488596;Name=YP_854584.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854584.1;transl_table=11
NC_008570.1	RefSeq	gene	63908	66385	.	-	.	ID=gene59;Dbxref=GeneID:4488597;Name=AHA_0060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0060
NC_008570.1	RefSeq	CDS	63908	66385	.	-	0	ID=cds55;Parent=gene59;Dbxref=Genbank:YP_854585.1,GeneID:4488597;Name=YP_854585.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854585.1;transl_table=11
NC_008570.1	RefSeq	gene	66437	67102	.	-	.	ID=gene60;Dbxref=GeneID:4488598;Name=AHA_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0061
NC_008570.1	RefSeq	CDS	66437	67102	.	-	0	ID=cds56;Parent=gene60;Dbxref=Genbank:YP_854586.1,GeneID:4488598;Name=YP_854586.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854586.1;transl_table=11
NC_008570.1	RefSeq	gene	67162	67737	.	-	.	ID=gene61;Dbxref=GeneID:4488599;Name=matB;gbkey=Gene;gene=matB;gene_biotype=protein_coding;locus_tag=AHA_0062
NC_008570.1	RefSeq	CDS	67162	67737	.	-	0	ID=cds57;Parent=gene61;Dbxref=Genbank:YP_854587.1,GeneID:4488599;Name=YP_854587.1;Note=identified by similarity to GB:AAK01671.1;gbkey=CDS;gene=matB;product=fimbrillin MatB;protein_id=YP_854587.1;transl_table=11
NC_008570.1	RefSeq	gene	68337	68960	.	+	.	ID=gene62;Dbxref=GeneID:4488600;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AHA_0063
NC_008570.1	RefSeq	CDS	68337	68960	.	+	0	ID=cds58;Parent=gene62;Dbxref=Genbank:YP_854588.1,GeneID:4488600;Name=YP_854588.1;Note=identified by similarity to SP:P30854%3B match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;gene=evgA;product=positive transcription regulator EvgA;protein_id=YP_854588.1;transl_table=11
NC_008570.1	RefSeq	gene	68963	72550	.	+	.	ID=gene63;Dbxref=GeneID:4488601;Name=AHA_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0064
NC_008570.1	RefSeq	CDS	68963	72550	.	+	0	ID=cds59;Parent=gene63;Dbxref=Genbank:YP_854589.1,GeneID:4488601;Name=YP_854589.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=virulence sensor protein BvgS;protein_id=YP_854589.1;transl_table=11
NC_008570.1	RefSeq	gene	72586	73026	.	-	.	ID=gene64;Dbxref=GeneID:4488602;Name=AHA_0065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0065
NC_008570.1	RefSeq	CDS	72586	73026	.	-	0	ID=cds60;Parent=gene64;Dbxref=Genbank:YP_854590.1,GeneID:4488602;Name=YP_854590.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854590.1;transl_table=11
NC_008570.1	RefSeq	gene	73217	74872	.	+	.	ID=gene65;Dbxref=GeneID:4488603;Name=AHA_0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0066
NC_008570.1	RefSeq	CDS	73217	74872	.	+	0	ID=cds61;Parent=gene65;Dbxref=Genbank:YP_854591.1,GeneID:4488603;Name=YP_854591.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_854591.1;transl_table=11
NC_008570.1	RefSeq	gene	75002	75733	.	+	.	ID=gene66;Dbxref=GeneID:4488604;Name=AHA_0067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0067
NC_008570.1	RefSeq	CDS	75002	75733	.	+	0	ID=cds62;Parent=gene66;Dbxref=Genbank:YP_854592.1,GeneID:4488604;Name=YP_854592.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;product=response regulator receiver domain-containing protein;protein_id=YP_854592.1;transl_table=11
NC_008570.1	RefSeq	gene	75855	77033	.	+	.	ID=gene67;Dbxref=GeneID:4488605;Name=AHA_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0068
NC_008570.1	RefSeq	CDS	75855	77033	.	+	0	ID=cds63;Parent=gene67;Dbxref=Genbank:YP_854593.1,GeneID:4488605;Name=YP_854593.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=inner membrane protein YhjX;protein_id=YP_854593.1;transl_table=11
NC_008570.1	RefSeq	gene	77107	78231	.	-	.	ID=gene68;Dbxref=GeneID:4488606;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AHA_0069
NC_008570.1	RefSeq	CDS	77107	78231	.	-	0	ID=cds64;Parent=gene68;Dbxref=Genbank:YP_854594.1,GeneID:4488606;Name=YP_854594.1;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_854594.1;transl_table=11
NC_008570.1	RefSeq	gene	78228	78737	.	-	.	ID=gene69;Dbxref=GeneID:4488607;Name=purE-1;gbkey=Gene;gene=purE-1;gene_biotype=protein_coding;locus_tag=AHA_0070
NC_008570.1	RefSeq	CDS	78228	78737	.	-	0	ID=cds65;Parent=gene69;Dbxref=Genbank:YP_854595.1,GeneID:4488607;Name=YP_854595.1;Note=identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE-1;product=phosphoribosylaminoimidazole carboxylase catalytic subunit;protein_id=YP_854595.1;transl_table=11
NC_008570.1	RefSeq	gene	78800	79102	.	-	.	ID=gene70;Dbxref=GeneID:4488608;Name=AHA_0071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0071
NC_008570.1	RefSeq	CDS	78800	79102	.	-	0	ID=cds66;Parent=gene70;Dbxref=Genbank:YP_854597.1,GeneID:4488608;Name=YP_854597.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854597.1;transl_table=11
NC_008570.1	RefSeq	gene	79107	80180	.	-	.	ID=gene71;Dbxref=GeneID:4488609;Name=AHA_0072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0072
NC_008570.1	RefSeq	CDS	79107	80180	.	-	0	ID=cds67;Parent=gene71;Dbxref=Genbank:YP_854598.1,GeneID:4488609;Name=YP_854598.1;Note=identified by match to protein family HMM PF05982;gbkey=CDS;product=sodium bicarbonate cotransporter;protein_id=YP_854598.1;transl_table=11
NC_008570.1	RefSeq	gene	80145	81047	.	+	.	ID=gene72;Dbxref=GeneID:4488610;Name=AHA_0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0073
NC_008570.1	RefSeq	CDS	80145	81047	.	+	0	ID=cds68;Parent=gene72;Dbxref=Genbank:YP_854600.1,GeneID:4488610;Name=YP_854600.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=regulatory protein LysR;protein_id=YP_854600.1;transl_table=11
NC_008570.1	RefSeq	gene	81312	83147	.	+	.	ID=gene73;Dbxref=GeneID:4488611;Name=AHA_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0074
NC_008570.1	RefSeq	CDS	81312	83147	.	+	0	ID=cds69;Parent=gene73;Dbxref=Genbank:YP_854601.1,GeneID:4488611;Name=YP_854601.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=vitamin B12 transporter BtuB;protein_id=YP_854601.1;transl_table=11
NC_008570.1	RefSeq	gene	83265	84059	.	+	.	ID=gene74;Dbxref=GeneID:4488612;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AHA_0075
NC_008570.1	RefSeq	CDS	83265	84059	.	+	0	ID=cds70;Parent=gene74;Dbxref=Genbank:YP_854602.1,GeneID:4488612;Name=YP_854602.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=YP_854602.1;transl_table=11
NC_008570.1	RefSeq	gene	84078	84569	.	-	.	ID=gene75;Dbxref=GeneID:4488613;Name=AHA_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0076
NC_008570.1	RefSeq	CDS	84078	84569	.	-	0	ID=cds71;Parent=gene75;Dbxref=Genbank:YP_854603.1,GeneID:4488613;Name=YP_854603.1;Note=identified by match to protein family HMM PF00076;gbkey=CDS;product=RNA-binding protein;protein_id=YP_854603.1;transl_table=11
NC_008570.1	RefSeq	gene	85174	86723	.	+	.	ID=gene76;Dbxref=GeneID:4488614;Name=rrsA;gbkey=Gene;gene=rrsA;gene_biotype=rRNA;locus_tag=AHA_0077
NC_008570.1	RefSeq	rRNA	85174	86723	.	+	.	ID=rna4;Parent=gene76;Dbxref=GeneID:4488614;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	85174	86723	.	+	.	ID=id5;Parent=rna4;Dbxref=GeneID:4488614;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	86944	87019	.	+	.	ID=gene77;Dbxref=GeneID:4488615;Name=AHA_0078;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0078
NC_008570.1	RefSeq	tRNA	86944	87019	.	+	.	ID=rna5;Parent=gene77;Dbxref=GeneID:4488615;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	86944	87019	.	+	.	ID=id6;Parent=rna5;Dbxref=GeneID:4488615;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	87259	90147	.	+	.	ID=gene78;Dbxref=GeneID:4490974;Name=rrlA;gbkey=Gene;gene=rrlA;gene_biotype=rRNA;locus_tag=AHA_0079
NC_008570.1	RefSeq	rRNA	87259	90147	.	+	.	ID=rna6;Parent=gene78;Dbxref=GeneID:4490974;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	87259	90147	.	+	.	ID=id7;Parent=rna6;Dbxref=GeneID:4490974;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	90259	90389	.	+	.	ID=gene79;Dbxref=GeneID:4490975;Name=rrfA;gbkey=Gene;gene=rrfA;gene_biotype=rRNA;locus_tag=AHA_0080
NC_008570.1	RefSeq	rRNA	90259	90389	.	+	.	ID=rna7;Parent=gene79;Dbxref=GeneID:4490975;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	90259	90389	.	+	.	ID=id8;Parent=rna7;Dbxref=GeneID:4490975;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	90487	90562	.	+	.	ID=gene80;Dbxref=GeneID:4490976;Name=AHA_0081;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0081
NC_008570.1	RefSeq	tRNA	90487	90562	.	+	.	ID=rna8;Parent=gene80;Dbxref=GeneID:4490976;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	exon	90487	90562	.	+	.	ID=id9;Parent=rna8;Dbxref=GeneID:4490976;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	gene	90960	92225	.	+	.	ID=gene81;Dbxref=GeneID:4490977;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AHA_0082
NC_008570.1	RefSeq	CDS	90960	92225	.	+	0	ID=cds72;Parent=gene81;Dbxref=Genbank:YP_854604.1,GeneID:4490977;Name=YP_854604.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;gene=codA;product=cytosine deaminase;protein_id=YP_854604.1;transl_table=11
NC_008570.1	RefSeq	gene	92274	92690	.	+	.	ID=gene82;Dbxref=GeneID:4490978;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AHA_0083
NC_008570.1	RefSeq	CDS	92274	92690	.	+	0	ID=cds73;Parent=gene82;Dbxref=Genbank:YP_854605.1,GeneID:4490978;Name=YP_854605.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=crcB;product=camphor resistance protein CrcB;protein_id=YP_854605.1;transl_table=11
NC_008570.1	RefSeq	gene	92756	93508	.	+	.	ID=gene83;Dbxref=GeneID:4490979;Name=AHA_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0084
NC_008570.1	RefSeq	CDS	92756	93508	.	+	0	ID=cds74;Parent=gene83;Dbxref=Genbank:YP_854606.1,GeneID:4490979;Name=YP_854606.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM TIGR01934;gbkey=CDS;product=ubiquinone/menaquinone biosynthesis methyltransferase UbiE;protein_id=YP_854606.1;transl_table=11
NC_008570.1	RefSeq	gene	93517	94125	.	+	.	ID=gene84;Dbxref=GeneID:4490980;Name=AHA_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0085
NC_008570.1	RefSeq	CDS	93517	94125	.	+	0	ID=cds75;Parent=gene84;Dbxref=Genbank:YP_854607.1,GeneID:4490980;Name=YP_854607.1;Note=identified by similarity to GB:BAC58359.1%3B match to protein family HMM PF06843;gbkey=CDS;product=hypothetical protein;protein_id=YP_854607.1;transl_table=11
NC_008570.1	RefSeq	gene	94125	95765	.	+	.	ID=gene85;Dbxref=GeneID:4490981;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=AHA_0086
NC_008570.1	RefSeq	CDS	94125	95765	.	+	0	ID=cds76;Parent=gene85;Dbxref=Genbank:YP_854608.1,GeneID:4490981;Name=YP_854608.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=ubiquinone biosynthesis protein UbiB;protein_id=YP_854608.1;transl_table=11
NC_008570.1	RefSeq	gene	95806	96054	.	+	.	ID=gene86;Dbxref=GeneID:4490982;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AHA_0087
NC_008570.1	RefSeq	CDS	95806	96054	.	+	0	ID=cds77;Parent=gene86;Dbxref=Genbank:YP_854609.1,GeneID:4490982;Name=YP_854609.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;product=twin arginine translocase A;protein_id=YP_854609.1;transl_table=11
NC_008570.1	RefSeq	gene	96058	96501	.	+	.	ID=gene87;Dbxref=GeneID:4490983;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AHA_0088
NC_008570.1	RefSeq	CDS	96058	96501	.	+	0	ID=cds78;Parent=gene87;Dbxref=Genbank:YP_854610.1,GeneID:4490983;Name=YP_854610.1;Note=identified by similarity to SP:P69425%3B match to protein family HMM PF02416%3B match to protein family HMM TIGR01410;gbkey=CDS;gene=tatB;product=twin arginine-targeting protein translocase TatB;protein_id=YP_854610.1;transl_table=11
NC_008570.1	RefSeq	gene	96498	97253	.	+	.	ID=gene88;Dbxref=GeneID:4490984;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AHA_0089
NC_008570.1	RefSeq	CDS	96498	97253	.	+	0	ID=cds79;Parent=gene88;Dbxref=Genbank:YP_854611.1,GeneID:4490984;Name=YP_854611.1;Note=identified by similarity to SP:P69423%3B match to protein family HMM PF00902%3B match to protein family HMM TIGR00945;gbkey=CDS;gene=tatC;product=twin arginine-targeting protein translocase TatC;protein_id=YP_854611.1;transl_table=11
NC_008570.1	RefSeq	gene	97365	98150	.	+	.	ID=gene89;Dbxref=GeneID:4490985;Name=AHA_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0090
NC_008570.1	RefSeq	CDS	97365	98150	.	+	0	ID=cds80;Parent=gene89;Dbxref=Genbank:YP_854612.1,GeneID:4490985;Name=YP_854612.1;Note=identified by match to protein family HMM PF01026;gbkey=CDS;product=deoxyribonuclease TatD;protein_id=YP_854612.1;transl_table=11
NC_008570.1	RefSeq	gene	98154	99173	.	+	.	ID=gene90;Dbxref=GeneID:4490986;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AHA_0091
NC_008570.1	RefSeq	CDS	98154	99173	.	+	0	ID=cds81;Parent=gene90;Dbxref=Genbank:YP_854613.1,GeneID:4490986;Name=YP_854613.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;gene=hemB;product=delta-aminolevulinic acid dehydratase;protein_id=YP_854613.1;transl_table=11
NC_008570.1	RefSeq	gene	99396	101438	.	+	.	ID=gene91;Dbxref=GeneID:4490987;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AHA_0092
NC_008570.1	RefSeq	CDS	99396	101438	.	+	0	ID=cds82;Parent=gene91;Dbxref=Genbank:YP_854616.1,GeneID:4490987;Name=YP_854616.1;Note=identified by similarity to SP:P27298%3B match to protein family HMM PF01432;gbkey=CDS;gene=prlC;product=oligopeptidase A;protein_id=YP_854616.1;transl_table=11
NC_008570.1	RefSeq	gene	101643	104186	.	+	.	ID=gene92;Dbxref=GeneID:4490988;Name=AHA_0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0093
NC_008570.1	RefSeq	CDS	101643	104186	.	+	0	ID=cds83;Parent=gene92;Dbxref=Genbank:YP_854617.1,GeneID:4490988;Name=YP_854617.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=protein MorA;protein_id=YP_854617.1;transl_table=11
NC_008570.1	RefSeq	gene	104281	105027	.	+	.	ID=gene93;Dbxref=GeneID:4490989;Name=AHA_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0094
NC_008570.1	RefSeq	CDS	104281	105027	.	+	0	ID=cds84;Parent=gene93;Dbxref=Genbank:YP_854618.1,GeneID:4490989;Name=YP_854618.1;Note=identified by match to protein family HMM PF04445;gbkey=CDS;product=hypothetical protein;protein_id=YP_854618.1;transl_table=11
NC_008570.1	RefSeq	gene	105382	106371	.	-	.	ID=gene94;Dbxref=GeneID:4490990;Name=AHA_0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0095
NC_008570.1	RefSeq	CDS	105382	106371	.	-	0	ID=cds85;Parent=gene94;Dbxref=Genbank:YP_854620.1,GeneID:4490990;Name=YP_854620.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854620.1;transl_table=11
NC_008570.1	RefSeq	gene	106568	108058	.	-	.	ID=gene95;Dbxref=GeneID:4490991;Name=AHA_0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0096
NC_008570.1	RefSeq	CDS	106568	108058	.	-	0	ID=cds86;Parent=gene95;Dbxref=Genbank:YP_854621.1,GeneID:4490991;Name=YP_854621.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=YP_854621.1;transl_table=11
NC_008570.1	RefSeq	gene	108073	109362	.	-	.	ID=gene96;Dbxref=GeneID:4490992;Name=AHA_0097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0097
NC_008570.1	RefSeq	CDS	108073	109362	.	-	0	ID=cds87;Parent=gene96;Dbxref=Genbank:YP_854622.1,GeneID:4490992;Name=YP_854622.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=YP_854622.1;transl_table=11
NC_008570.1	RefSeq	gene	109476	109802	.	+	.	ID=gene97;Dbxref=GeneID:4489138;Name=trx;gbkey=Gene;gene=trx;gene_biotype=protein_coding;locus_tag=AHA_0098
NC_008570.1	RefSeq	CDS	109476	109802	.	+	0	ID=cds88;Parent=gene97;Dbxref=Genbank:YP_854623.1,GeneID:4489138;Name=YP_854623.1;Note=identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068;gbkey=CDS;gene=trx;product=thioredoxin;protein_id=YP_854623.1;transl_table=11
NC_008570.1	RefSeq	gene	110010	111275	.	+	.	ID=gene98;Dbxref=GeneID:4489139;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AHA_0099
NC_008570.1	RefSeq	CDS	110010	111275	.	+	0	ID=cds89;Parent=gene98;Dbxref=Genbank:YP_854624.1,GeneID:4489139;Name=YP_854624.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=YP_854624.1;transl_table=11
NC_008570.1	RefSeq	gene	111589	112389	.	+	.	ID=gene99;Dbxref=GeneID:4489140;Name=AHA_0100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0100
NC_008570.1	RefSeq	CDS	111589	112389	.	+	0	ID=cds90;Parent=gene99;Dbxref=Genbank:YP_854625.1,GeneID:4489140;Name=YP_854625.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854625.1;transl_table=11
NC_008570.1	RefSeq	gene	112420	113889	.	+	.	ID=gene100;Dbxref=GeneID:4489141;Name=AHA_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0101
NC_008570.1	RefSeq	CDS	112420	113889	.	+	0	ID=cds91;Parent=gene100;Dbxref=Genbank:YP_854626.1,GeneID:4489141;Name=YP_854626.1;Note=identified by match to protein family HMM PF01977%3B match to protein family HMM TIGR00148;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_854626.1;transl_table=11
NC_008570.1	RefSeq	gene	114058	114756	.	+	.	ID=gene101;Dbxref=GeneID:4489142;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI,ubiB;locus_tag=AHA_0102
NC_008570.1	RefSeq	CDS	114058	114756	.	+	0	ID=cds92;Parent=gene101;Dbxref=Genbank:YP_854627.1,GeneID:4489142;Name=YP_854627.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=YP_854627.1;transl_table=11
NC_008570.1	RefSeq	gene	114886	115143	.	-	.	ID=gene102;Dbxref=GeneID:4489143;Name=AHA_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0103
NC_008570.1	RefSeq	CDS	114886	115143	.	-	0	ID=cds93;Parent=gene102;Dbxref=Genbank:YP_854629.1,GeneID:4489143;Name=YP_854629.1;Note=identified by match to protein family HMM PF04380;gbkey=CDS;product=hypothetical protein;protein_id=YP_854629.1;transl_table=11
NC_008570.1	RefSeq	gene	115445	117862	.	+	.	ID=gene103;Dbxref=GeneID:4489144;Name=AHA_0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0104
NC_008570.1	RefSeq	CDS	115445	117862	.	+	0	ID=cds94;Parent=gene103;Dbxref=Genbank:YP_854631.1,GeneID:4489144;Name=YP_854631.1;gbkey=CDS;product=extracellular lipase;protein_id=YP_854631.1;transl_table=11
NC_008570.1	RefSeq	gene	118002	118835	.	-	.	ID=gene104;Dbxref=GeneID:4489145;Name=AHA_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0105
NC_008570.1	RefSeq	CDS	118002	118835	.	-	0	ID=cds95;Parent=gene104;Dbxref=Genbank:YP_854633.1,GeneID:4489145;Name=YP_854633.1;Note=identified by match to protein family HMM PF01694;gbkey=CDS;product=GlpG protein;protein_id=YP_854633.1;transl_table=11
NC_008570.1	RefSeq	gene	118832	119155	.	-	.	ID=gene105;Dbxref=GeneID:4489146;Name=AHA_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0106
NC_008570.1	RefSeq	CDS	118832	119155	.	-	0	ID=cds96;Parent=gene105;Dbxref=Genbank:YP_854635.1,GeneID:4489146;Name=YP_854635.1;Note=identified by match to protein family HMM PF00581;gbkey=CDS;product=thiosulfate sulfurtransferase GlpE;protein_id=YP_854635.1;transl_table=11
NC_008570.1	RefSeq	gene	119226	119912	.	+	.	ID=gene106;Dbxref=GeneID:4489147;Name=AHA_0108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0108
NC_008570.1	RefSeq	CDS	119226	119912	.	+	0	ID=cds97;Parent=gene106;Dbxref=Genbank:YP_854636.1,GeneID:4489147;Name=YP_854636.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_854636.1;transl_table=11
NC_008570.1	RefSeq	gene	119909	120742	.	-	.	ID=gene107;Dbxref=GeneID:4489148;Name=AHA_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0107
NC_008570.1	RefSeq	CDS	119909	120742	.	-	0	ID=cds98;Parent=gene107;Dbxref=Genbank:YP_854637.1,GeneID:4489148;Name=YP_854637.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_854637.1;transl_table=11
NC_008570.1	RefSeq	gene	120746	121447	.	-	.	ID=gene108;Dbxref=GeneID:4489149;Name=AHA_0109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0109
NC_008570.1	RefSeq	CDS	120746	121447	.	-	0	ID=cds99;Parent=gene108;Dbxref=Genbank:YP_854638.1,GeneID:4489149;Name=YP_854638.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=YP_854638.1;transl_table=11
NC_008570.1	RefSeq	gene	121458	122231	.	-	.	ID=gene109;Dbxref=GeneID:4489150;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AHA_0110
NC_008570.1	RefSeq	CDS	121458	122231	.	-	0	ID=cds100;Parent=gene109;Dbxref=Genbank:YP_854639.1,GeneID:4489150;Name=YP_854639.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=leucine/isoleucine/valine transporter ATP-binding subunit;protein_id=YP_854639.1;transl_table=11
NC_008570.1	RefSeq	gene	122228	123499	.	-	.	ID=gene110;Dbxref=GeneID:4489151;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AHA_0111
NC_008570.1	RefSeq	CDS	122228	123499	.	-	0	ID=cds101;Parent=gene110;Dbxref=Genbank:YP_854640.1,GeneID:4489151;Name=YP_854640.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=YP_854640.1;transl_table=11
NC_008570.1	RefSeq	gene	123496	124422	.	-	.	ID=gene111;Dbxref=GeneID:4489152;Name=AHA_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0112
NC_008570.1	RefSeq	CDS	123496	124422	.	-	0	ID=cds102;Parent=gene111;Dbxref=Genbank:YP_854642.1,GeneID:4489152;Name=YP_854642.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=high-affinity branched-chain amino acid transport system permeaseprotein LivH;protein_id=YP_854642.1;transl_table=11
NC_008570.1	RefSeq	gene	124487	125590	.	-	.	ID=gene112;Dbxref=GeneID:4489153;Name=AHA_0113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0113
NC_008570.1	RefSeq	CDS	124487	125590	.	-	0	ID=cds103;Parent=gene112;Dbxref=Genbank:YP_854643.1,GeneID:4489153;Name=YP_854643.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;product=Leu/Ile/Val-binding protein;protein_id=YP_854643.1;transl_table=11
NC_008570.1	RefSeq	gene	126044	127048	.	+	.	ID=gene113;Dbxref=GeneID:4489154;Name=AHA_0114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0114
NC_008570.1	RefSeq	CDS	126044	127048	.	+	0	ID=cds104;Parent=gene113;Dbxref=Genbank:YP_854645.1,GeneID:4489154;Name=YP_854645.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=ribose operon repressor;protein_id=YP_854645.1;transl_table=11
NC_008570.1	RefSeq	gene	127118	128437	.	-	.	ID=gene114;Dbxref=GeneID:4489155;Name=AHA_0115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0115
NC_008570.1	RefSeq	CDS	127118	128437	.	-	0	ID=cds105;Parent=gene114;Dbxref=Genbank:YP_854646.1,GeneID:4489155;Name=YP_854646.1;Note=identified by match to protein family HMM PF02056;gbkey=CDS;product=maltose-6'-phosphate glucosidase;protein_id=YP_854646.1;transl_table=11
NC_008570.1	RefSeq	gene	128440	130026	.	-	.	ID=gene115;Dbxref=GeneID:4489156;Name=AHA_0116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0116
NC_008570.1	RefSeq	CDS	128440	130026	.	-	0	ID=cds106;Parent=gene115;Dbxref=Genbank:YP_854647.1,GeneID:4489156;Name=YP_854647.1;Note=identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00852%3B match to protein family HMM TIGR02005;gbkey=CDS;product=PTS system maltose-specific transporter subunit IICB;protein_id=YP_854647.1;transl_table=11
NC_008570.1	RefSeq	gene	130311	131018	.	+	.	ID=gene116;Dbxref=GeneID:4489157;Name=AHA_0117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0117
NC_008570.1	RefSeq	CDS	130311	131018	.	+	0	ID=cds107;Parent=gene116;Dbxref=Genbank:YP_854648.1,GeneID:4489157;Name=YP_854648.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_854648.1;transl_table=11
NC_008570.1	RefSeq	gene	131099	132625	.	-	.	ID=gene117;Dbxref=GeneID:4487498;Name=AHA_0118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0118
NC_008570.1	RefSeq	CDS	131099	132625	.	-	0	ID=cds108;Parent=gene117;Dbxref=Genbank:YP_854649.1,GeneID:4487498;Name=YP_854649.1;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon;gbkey=CDS;product=anaerobic nitric oxide reductase transcriptional regulator;protein_id=YP_854649.1;transl_table=11
NC_008570.1	RefSeq	gene	132796	134283	.	+	.	ID=gene118;Dbxref=GeneID:4487499;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AHA_0119
NC_008570.1	RefSeq	CDS	132796	134283	.	+	0	ID=cds109;Parent=gene118;Dbxref=Genbank:YP_854650.1,GeneID:4487499;Name=YP_854650.1;Note=detoxifies nitric oxide using NADH;gbkey=CDS;gene=norV;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=YP_854650.1;transl_table=11
NC_008570.1	RefSeq	gene	134280	135446	.	+	.	ID=gene119;Dbxref=GeneID:4487500;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AHA_0120
NC_008570.1	RefSeq	CDS	134280	135446	.	+	0	ID=cds110;Parent=gene119;Dbxref=Genbank:YP_854651.1,GeneID:4487500;Name=YP_854651.1;Note=catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase;gbkey=CDS;gene=norW;product=nitric oxide reductase;protein_id=YP_854651.1;transl_table=11
NC_008570.1	RefSeq	gene	135498	135839	.	+	.	ID=gene120;Dbxref=GeneID:4487501;Name=AHA_0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0121
NC_008570.1	RefSeq	CDS	135498	135839	.	+	0	ID=cds111;Parent=gene120;Dbxref=Genbank:YP_854653.1,GeneID:4487501;Name=YP_854653.1;gbkey=CDS;product=tellurite resistance protein TehB;protein_id=YP_854653.1;transl_table=11
NC_008570.1	RefSeq	gene	135961	137178	.	+	.	ID=gene121;Dbxref=GeneID:4487502;Name=AHA_0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0122
NC_008570.1	RefSeq	CDS	135961	137178	.	+	0	ID=cds112;Parent=gene121;Dbxref=Genbank:YP_854654.1,GeneID:4487502;Name=YP_854654.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_854654.1;transl_table=11
NC_008570.1	RefSeq	gene	137466	138692	.	+	.	ID=gene122;Dbxref=GeneID:4487503;Name=AHA_0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0123
NC_008570.1	RefSeq	CDS	137466	138692	.	+	0	ID=cds113;Parent=gene122;Dbxref=Genbank:YP_854657.1,GeneID:4487503;Name=YP_854657.1;Note=identified by match to protein family HMM PF03222%3B match to protein family HMM TIGR00837;gbkey=CDS;product=low affinity tryptophan permease;protein_id=YP_854657.1;transl_table=11
NC_008570.1	RefSeq	gene	138783	139262	.	-	.	ID=gene123;Dbxref=GeneID:4487504;Name=AHA_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0124
NC_008570.1	RefSeq	CDS	138783	139262	.	-	0	ID=cds114;Parent=gene123;Dbxref=Genbank:YP_854658.1,GeneID:4487504;Name=YP_854658.1;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_854658.1;transl_table=11
NC_008570.1	RefSeq	gene	139376	139780	.	-	.	ID=gene124;Dbxref=GeneID:4487505;Name=AHA_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0125
NC_008570.1	RefSeq	CDS	139376	139780	.	-	0	ID=cds115;Parent=gene124;Dbxref=Genbank:YP_854659.1,GeneID:4487505;Name=YP_854659.1;Note=identified by similarity to SP:P76002;gbkey=CDS;product=hypothetical protein;protein_id=YP_854659.1;transl_table=11
NC_008570.1	RefSeq	gene	140006	140512	.	+	.	ID=gene125;Dbxref=GeneID:4487506;Name=AHA_0126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0126
NC_008570.1	RefSeq	CDS	140006	140512	.	+	0	ID=cds116;Parent=gene125;Dbxref=Genbank:YP_854661.1,GeneID:4487506;Name=YP_854661.1;gbkey=CDS;product=kinase;protein_id=YP_854661.1;transl_table=11
NC_008570.1	RefSeq	gene	141378	143447	.	-	.	ID=gene126;Dbxref=GeneID:4487507;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AHA_0127
NC_008570.1	RefSeq	CDS	141378	143447	.	-	0	ID=cds117;Parent=gene126;Dbxref=Genbank:YP_854662.1,GeneID:4487507;Name=YP_854662.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_854662.1;transl_table=11
NC_008570.1	RefSeq	gene	143457	144380	.	-	.	ID=gene127;Dbxref=GeneID:4487508;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AHA_0128
NC_008570.1	RefSeq	CDS	143457	144380	.	-	0	ID=cds118;Parent=gene127;Dbxref=Genbank:YP_854663.1,GeneID:4487508;Name=YP_854663.1;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_854663.1;transl_table=11
NC_008570.1	RefSeq	gene	144590	145171	.	+	.	ID=gene128;Dbxref=GeneID:4487509;Name=AHA_0129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0129
NC_008570.1	RefSeq	CDS	144590	145171	.	+	0	ID=cds119;Parent=gene128;Dbxref=Genbank:YP_854664.1,GeneID:4487509;Name=YP_854664.1;Note=identified by match to protein family HMM PF03352%3B match to protein family HMM TIGR00624;gbkey=CDS;product=DNA-3-methyladenine glycosylase I;protein_id=YP_854664.1;transl_table=11
NC_008570.1	RefSeq	gene	145248	147284	.	-	.	ID=gene129;Dbxref=GeneID:4487510;Name=AHA_0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0130
NC_008570.1	RefSeq	CDS	145248	147284	.	-	0	ID=cds120;Parent=gene129;Dbxref=Genbank:YP_854665.1,GeneID:4487510;Name=YP_854665.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF01814%3B match to protein family HMM TIGR02481;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_854665.1;transl_table=11
NC_008570.1	RefSeq	gene	147537	148193	.	+	.	ID=gene130;Dbxref=GeneID:4487511;Name=AHA_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0131
NC_008570.1	RefSeq	CDS	147537	148193	.	+	0	ID=cds121;Parent=gene130;Dbxref=Genbank:YP_854667.1,GeneID:4487511;Name=YP_854667.1;Note=identified by match to protein family HMM PF00691%3B match to protein family HMM PF05433;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_854667.1;transl_table=11
NC_008570.1	RefSeq	gene	148461	148808	.	-	.	ID=gene131;Dbxref=GeneID:4487512;Name=AHA_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0132
NC_008570.1	RefSeq	CDS	148461	148808	.	-	0	ID=cds122;Parent=gene131;Dbxref=Genbank:YP_854668.1,GeneID:4487512;Name=YP_854668.1;Note=identified by match to protein family HMM PF01042;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=YP_854668.1;transl_table=11
NC_008570.1	RefSeq	gene	148830	149078	.	-	.	ID=gene132;Dbxref=GeneID:4487513;Name=AHA_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0133
NC_008570.1	RefSeq	CDS	148830	149078	.	-	0	ID=cds123;Parent=gene132;Dbxref=Genbank:YP_854669.1,GeneID:4487513;Name=YP_854669.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfur transfer protein SirA;protein_id=YP_854669.1;transl_table=11
NC_008570.1	RefSeq	gene	149247	149438	.	+	.	ID=gene133;Dbxref=GeneID:4487514;Name=AHA_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0134
NC_008570.1	RefSeq	CDS	149247	149438	.	+	0	ID=cds124;Parent=gene133;Dbxref=Genbank:YP_854671.1,GeneID:4487514;Name=YP_854671.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854671.1;transl_table=11
NC_008570.1	RefSeq	gene	149511	150749	.	-	.	ID=gene134;Dbxref=GeneID:4487515;Name=AHA_0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0135
NC_008570.1	RefSeq	CDS	149511	150749	.	-	0	ID=cds125;Parent=gene134;Dbxref=Genbank:YP_854672.1,GeneID:4487515;Name=YP_854672.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=sugar ABC transporter periplasmic protein;protein_id=YP_854672.1;transl_table=11
NC_008570.1	RefSeq	gene	150754	152169	.	-	.	ID=gene135;Dbxref=GeneID:4487516;Name=AHA_0136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0136
NC_008570.1	RefSeq	CDS	150754	152169	.	-	0	ID=cds126;Parent=gene135;Dbxref=Genbank:YP_854673.1,GeneID:4487516;Name=YP_854673.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=signal transduction histidine kinase;protein_id=YP_854673.1;transl_table=11
NC_008570.1	RefSeq	gene	152251	152985	.	-	.	ID=gene136;Dbxref=GeneID:4490318;Name=AHA_0137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0137
NC_008570.1	RefSeq	CDS	152251	152985	.	-	0	ID=cds127;Parent=gene136;Dbxref=Genbank:YP_854674.1,GeneID:4490318;Name=YP_854674.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=protein GltR;protein_id=YP_854674.1;transl_table=11
NC_008570.1	RefSeq	gene	153298	154461	.	-	.	ID=gene137;Dbxref=GeneID:4490319;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AHA_0138
NC_008570.1	RefSeq	CDS	153298	154461	.	-	0	ID=cds128;Parent=gene137;Dbxref=Genbank:YP_854675.1,GeneID:4490319;Name=YP_854675.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=YP_854675.1;transl_table=11
NC_008570.1	RefSeq	gene	154483	156630	.	-	.	ID=gene138;Dbxref=GeneID:4490320;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AHA_0139
NC_008570.1	RefSeq	CDS	154483	156630	.	-	0	ID=cds129;Parent=gene138;Dbxref=Genbank:YP_854676.1,GeneID:4490320;Name=YP_854676.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_854676.1;transl_table=11
NC_008570.1	RefSeq	gene	156833	158770	.	-	.	ID=gene139;Dbxref=GeneID:4490321;Name=AHA_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0140
NC_008570.1	RefSeq	CDS	156833	158770	.	-	0	ID=cds130;Parent=gene139;Dbxref=Genbank:YP_854677.1,GeneID:4490321;Name=YP_854677.1;Note=AcsA%3B in Sinorhizobium meliloti this enzyme is required for acetoacetate activation%3B similar to acetyl-CoA synthase;gbkey=CDS;product=acetoacetyl-CoA synthetase;protein_id=YP_854677.1;transl_table=11
NC_008570.1	RefSeq	gene	158961	160283	.	+	.	ID=gene140;Dbxref=GeneID:4490322;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AHA_0141
NC_008570.1	RefSeq	CDS	158961	160283	.	+	0	ID=cds131;Parent=gene140;Dbxref=Genbank:YP_854678.1,GeneID:4490322;Name=YP_854678.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=YP_854678.1;transl_table=11
NC_008570.1	RefSeq	gene	160283	160900	.	+	.	ID=gene141;Dbxref=GeneID:4490323;Name=AHA_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0142
NC_008570.1	RefSeq	CDS	160283	160900	.	+	0	ID=cds132;Parent=gene141;Dbxref=Genbank:YP_854679.1,GeneID:4490323;Name=YP_854679.1;Note=identified by similarity to GB:BAB38199.1%3B match to protein family HMM PF01205%3B match to protein family HMM TIGR00257;gbkey=CDS;product=hypothetical protein;protein_id=YP_854679.1;transl_table=11
NC_008570.1	RefSeq	gene	160937	162394	.	+	.	ID=gene142;Dbxref=GeneID:4490324;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AHA_0143
NC_008570.1	RefSeq	CDS	160937	162394	.	+	0	ID=cds133;Parent=gene142;Dbxref=Genbank:YP_854680.1,GeneID:4490324;Name=YP_854680.1;Note=identified by similarity to SP:P21166%3B match to protein family HMM PF02386%3B match to protein family HMM TIGR00933;gbkey=CDS;gene=trkH;product=Trk system potassium uptake protein TrkH;protein_id=YP_854680.1;transl_table=11
NC_008570.1	RefSeq	gene	162333	162926	.	+	.	ID=gene143;Dbxref=GeneID:4490325;Name=AHA_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0144
NC_008570.1	RefSeq	CDS	162333	162926	.	+	0	ID=cds134;Parent=gene143;Dbxref=Genbank:YP_854681.1,GeneID:4490325;Name=YP_854681.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=YP_854681.1;transl_table=11
NC_008570.1	RefSeq	gene	163372	164921	.	+	.	ID=gene144;Dbxref=GeneID:4490326;Name=rrsB;gbkey=Gene;gene=rrsB;gene_biotype=rRNA;locus_tag=AHA_0145
NC_008570.1	RefSeq	rRNA	163372	164921	.	+	.	ID=rna9;Parent=gene144;Dbxref=GeneID:4490326;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	163372	164921	.	+	.	ID=id10;Parent=rna9;Dbxref=GeneID:4490326;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	165116	165191	.	+	.	ID=gene145;Dbxref=GeneID:4490327;Name=AHA_0146;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0146
NC_008570.1	RefSeq	tRNA	165116	165191	.	+	.	ID=rna10;Parent=gene145;Dbxref=GeneID:4490327;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	165116	165191	.	+	.	ID=id11;Parent=rna10;Dbxref=GeneID:4490327;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	165428	168316	.	+	.	ID=gene146;Dbxref=GeneID:4490328;Name=rrlB;gbkey=Gene;gene=rrlB;gene_biotype=rRNA;locus_tag=AHA_0147
NC_008570.1	RefSeq	rRNA	165428	168316	.	+	.	ID=rna11;Parent=gene146;Dbxref=GeneID:4490328;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	165428	168316	.	+	.	ID=id12;Parent=rna11;Dbxref=GeneID:4490328;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	168426	168556	.	+	.	ID=gene147;Dbxref=GeneID:4490329;Name=rrfB;gbkey=Gene;gene=rrfB;gene_biotype=rRNA;locus_tag=AHA_0148
NC_008570.1	RefSeq	rRNA	168426	168556	.	+	.	ID=rna12;Parent=gene147;Dbxref=GeneID:4490329;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	168426	168556	.	+	.	ID=id13;Parent=rna12;Dbxref=GeneID:4490329;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	168638	171214	.	-	.	ID=gene148;Dbxref=GeneID:4490330;Name=AHA_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0149
NC_008570.1	RefSeq	CDS	168638	171214	.	-	0	ID=cds135;Parent=gene148;Dbxref=Genbank:YP_854682.1,GeneID:4490330;Name=YP_854682.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM PF02629;gbkey=CDS;product=acyl-CoA synthetase;protein_id=YP_854682.1;transl_table=11
NC_008570.1	RefSeq	gene	171287	171478	.	-	.	ID=gene149;Dbxref=GeneID:4490331;Name=AHA_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0150
NC_008570.1	RefSeq	CDS	171287	171478	.	-	0	ID=cds136;Parent=gene149;Dbxref=Genbank:YP_854683.1,GeneID:4490331;Name=YP_854683.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854683.1;transl_table=11
NC_008570.1	RefSeq	gene	171648	172520	.	+	.	ID=gene150;Dbxref=GeneID:4490332;Name=AHA_0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0152
NC_008570.1	RefSeq	CDS	171648	172520	.	+	0	ID=cds137;Parent=gene150;Dbxref=Genbank:YP_854684.1,GeneID:4490332;Name=YP_854684.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854684.1;transl_table=11
NC_008570.1	RefSeq	gene	172509	173402	.	-	.	ID=gene151;Dbxref=GeneID:4490333;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AHA_0151
NC_008570.1	RefSeq	CDS	172509	173402	.	-	0	ID=cds138;Parent=gene151;Dbxref=Genbank:YP_854685.1,GeneID:4490333;Name=YP_854685.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;gene=ilvY;product=DNA-binding transcriptional regulator IlvY;protein_id=YP_854685.1;transl_table=11
NC_008570.1	RefSeq	gene	173624	175105	.	+	.	ID=gene152;Dbxref=GeneID:4490334;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AHA_0153
NC_008570.1	RefSeq	CDS	173624	175105	.	+	0	ID=cds139;Parent=gene152;Dbxref=Genbank:YP_854686.1,GeneID:4490334;Name=YP_854686.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=YP_854686.1;transl_table=11
NC_008570.1	RefSeq	gene	175254	176903	.	-	.	ID=gene153;Dbxref=GeneID:4490335;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AHA_0154
NC_008570.1	RefSeq	CDS	175254	176903	.	-	0	ID=cds140;Parent=gene153;Dbxref=Genbank:YP_854687.1,GeneID:4490335;Name=YP_854687.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=YP_854687.1;transl_table=11
NC_008570.1	RefSeq	gene	177320	177508	.	+	.	ID=gene154;Dbxref=GeneID:4490336;Name=AHA_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0155
NC_008570.1	RefSeq	CDS	177320	177508	.	+	0	ID=cds141;Parent=gene154;Dbxref=Genbank:YP_854688.1,GeneID:4490336;Name=YP_854688.1;gbkey=CDS;product=phage lysis protein Y%2C holin;protein_id=YP_854688.1;transl_table=11
NC_008570.1	RefSeq	gene	177635	178471	.	-	.	ID=gene155;Dbxref=GeneID:4490337;Name=AHA_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0156
NC_008570.1	RefSeq	CDS	177635	178471	.	-	0	ID=cds142;Parent=gene155;Dbxref=Genbank:YP_854689.1,GeneID:4490337;Name=YP_854689.1;Note=identified by match to protein family HMM PF00924%3B match to protein family HMM PF05552;gbkey=CDS;product=small-conductance mechanosensitive channel;protein_id=YP_854689.1;transl_table=11
NC_008570.1	RefSeq	gene	178658	179254	.	-	.	ID=gene156;Dbxref=GeneID:4487420;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=AHA_0157
NC_008570.1	RefSeq	CDS	178658	179254	.	-	0	ID=cds143;Parent=gene156;Dbxref=Genbank:YP_854690.1,GeneID:4487420;Name=YP_854690.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion protein;protein_id=YP_854690.1;transl_table=11
NC_008570.1	RefSeq	gene	179324	179782	.	-	.	ID=gene157;Dbxref=GeneID:4487421;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AHA_0158
NC_008570.1	RefSeq	CDS	179324	179782	.	-	0	ID=cds144;Parent=gene157;Dbxref=Genbank:YP_854691.1,GeneID:4487421;Name=YP_854691.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=YP_854691.1;transl_table=11
NC_008570.1	RefSeq	gene	179823	181025	.	-	.	ID=gene158;Dbxref=GeneID:4487422;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AHA_0159
NC_008570.1	RefSeq	CDS	179823	181025	.	-	0	ID=cds145;Parent=gene158;Dbxref=Genbank:YP_854692.1,GeneID:4487422;Name=YP_854692.1;Note=identified by similarity to SP:P24285%3B match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521;gbkey=CDS;gene=coaBC;product=phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase;protein_id=YP_854692.1;transl_table=11
NC_008570.1	RefSeq	gene	181173	181847	.	+	.	ID=gene159;Dbxref=GeneID:4487423;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AHA_0160
NC_008570.1	RefSeq	CDS	181173	181847	.	+	0	ID=cds146;Parent=gene159;Dbxref=Genbank:YP_854693.1,GeneID:4487423;Name=YP_854693.1;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;gbkey=CDS;gene=radC;product=DNA repair protein RadC;protein_id=YP_854693.1;transl_table=11
NC_008570.1	RefSeq	gene	181984	182220	.	+	.	ID=gene160;Dbxref=GeneID:4487424;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AHA_0161
NC_008570.1	RefSeq	CDS	181984	182220	.	+	0	ID=cds147;Parent=gene160;Dbxref=Genbank:YP_854694.1,GeneID:4487424;Name=YP_854694.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=YP_854694.1;transl_table=11
NC_008570.1	RefSeq	gene	182232	182399	.	+	.	ID=gene161;Dbxref=GeneID:4487425;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AHA_0162
NC_008570.1	RefSeq	CDS	182232	182399	.	+	0	ID=cds148;Parent=gene161;Dbxref=Genbank:YP_854695.1,GeneID:4487425;Name=YP_854695.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=YP_854695.1;transl_table=11
NC_008570.1	RefSeq	gene	182493	182948	.	+	.	ID=gene162;Dbxref=GeneID:4487426;Name=AHA_0163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0163
NC_008570.1	RefSeq	CDS	182493	182948	.	+	0	ID=cds149;Parent=gene162;Dbxref=Genbank:YP_854696.1,GeneID:4487426;Name=YP_854696.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854696.1;transl_table=11
NC_008570.1	RefSeq	gene	182978	183790	.	+	.	ID=gene163;Dbxref=GeneID:4487427;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AHA_0164
NC_008570.1	RefSeq	CDS	182978	183790	.	+	0	ID=cds150;Parent=gene163;Dbxref=Genbank:YP_854697.1,GeneID:4487427;Name=YP_854697.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_854697.1;transl_table=11
NC_008570.1	RefSeq	gene	183969	184850	.	+	.	ID=gene164;Dbxref=GeneID:4487428;Name=AHA_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0165
NC_008570.1	RefSeq	CDS	183969	184850	.	+	0	ID=cds151;Parent=gene164;Dbxref=Genbank:YP_854698.1,GeneID:4487428;Name=YP_854698.1;Note=identified by match to protein family HMM PF04393;gbkey=CDS;product=hypothetical protein;protein_id=YP_854698.1;transl_table=11
NC_008570.1	RefSeq	gene	184904	185386	.	-	.	ID=gene165;Dbxref=GeneID:4487429;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AHA_0166
NC_008570.1	RefSeq	CDS	184904	185386	.	-	0	ID=cds152;Parent=gene165;Dbxref=Genbank:YP_854699.1,GeneID:4487429;Name=YP_854699.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=YP_854699.1;transl_table=11
NC_008570.1	RefSeq	gene	185610	186653	.	+	.	ID=gene166;Dbxref=GeneID:4487430;Name=AHA_0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0167
NC_008570.1	RefSeq	CDS	185610	186653	.	+	0	ID=cds153;Parent=gene166;Dbxref=Genbank:YP_854700.1,GeneID:4487430;Name=YP_854700.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;product=heptosyltransferase;protein_id=YP_854700.1;transl_table=11
NC_008570.1	RefSeq	gene	186723	187511	.	-	.	ID=gene167;Dbxref=GeneID:4487431;Name=AHA_0168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0168
NC_008570.1	RefSeq	CDS	186723	187511	.	-	0	ID=cds154;Parent=gene167;Dbxref=Genbank:YP_854701.1,GeneID:4487431;Name=YP_854701.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_854701.1;transl_table=11
NC_008570.1	RefSeq	gene	187753	188868	.	+	.	ID=gene168;Dbxref=GeneID:4487432;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AHA_0169
NC_008570.1	RefSeq	CDS	187753	188868	.	+	0	ID=cds155;Parent=gene168;Dbxref=Genbank:YP_854702.1,GeneID:4487432;Name=YP_854702.1;Note=identified by match to protein family HMM PF01075%3B match to protein family HMM TIGR02195;gbkey=CDS;gene=rfaF;product=lipopolysaccharide heptosyltransferase II;protein_id=YP_854702.1;transl_table=11
NC_008570.1	RefSeq	gene	188870	190135	.	+	.	ID=gene169;Dbxref=GeneID:4487433;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AHA_0170
NC_008570.1	RefSeq	CDS	188870	190135	.	+	0	ID=cds156;Parent=gene169;Dbxref=Genbank:YP_854703.1,GeneID:4487433;Name=YP_854703.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;gene=waaA;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=YP_854703.1;transl_table=11
NC_008570.1	RefSeq	gene	190206	191462	.	-	.	ID=gene170;Dbxref=GeneID:4487434;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=AHA_0171
NC_008570.1	RefSeq	CDS	190206	191462	.	-	0	ID=cds157;Parent=gene170;Dbxref=Genbank:YP_854704.1,GeneID:4487434;Name=YP_854704.1;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_854704.1;transl_table=11
NC_008570.1	RefSeq	gene	191523	191846	.	-	.	ID=gene171;Dbxref=GeneID:4487435;Name=AHA_0172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0172
NC_008570.1	RefSeq	CDS	191523	191846	.	-	0	ID=cds158;Parent=gene171;Dbxref=Genbank:YP_854705.1,GeneID:4487435;Name=YP_854705.1;Note=identified by match to protein family HMM PF02302;gbkey=CDS;product=PTS system mannitol-specific transporter subunit IIB;protein_id=YP_854705.1;transl_table=11
NC_008570.1	RefSeq	gene	191843	192286	.	-	.	ID=gene172;Dbxref=GeneID:4487436;Name=AHA_0173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0173
NC_008570.1	RefSeq	CDS	191843	192286	.	-	0	ID=cds159;Parent=gene172;Dbxref=Genbank:YP_854706.1,GeneID:4487436;Name=YP_854706.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=ascorbate-specific phosphotransferase enzyme IIA component;protein_id=YP_854706.1;transl_table=11
NC_008570.1	RefSeq	gene	192539	193561	.	+	.	ID=gene173;Dbxref=GeneID:4487437;Name=AHA_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0174
NC_008570.1	RefSeq	CDS	192539	193561	.	+	0	ID=cds160;Parent=gene173;Dbxref=Genbank:YP_854707.1,GeneID:4487437;Name=YP_854707.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=HTH-type transcriptional regulator GntR;protein_id=YP_854707.1;transl_table=11
NC_008570.1	RefSeq	gene	193591	194571	.	+	.	ID=gene174;Dbxref=GeneID:4487438;Name=AHA_0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0175
NC_008570.1	RefSeq	CDS	193591	194571	.	+	0	ID=cds161;Parent=gene174;Dbxref=Genbank:YP_854708.1,GeneID:4487438;Name=YP_854708.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM TIGR02823;gbkey=CDS;product=quinone oxidoreductase YhdH/YhfP family;protein_id=YP_854708.1;transl_table=11
NC_008570.1	RefSeq	gene	194616	194765	.	+	.	ID=gene175;Dbxref=GeneID:4486806;Name=AHA_0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0176
NC_008570.1	RefSeq	CDS	194616	194765	.	+	0	ID=cds162;Parent=gene175;Dbxref=Genbank:YP_854709.1,GeneID:4486806;Name=YP_854709.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854709.1;transl_table=11
NC_008570.1	RefSeq	gene	194898	195239	.	+	.	ID=gene176;Dbxref=GeneID:4486807;Name=AHA_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0177
NC_008570.1	RefSeq	CDS	194898	195239	.	+	0	ID=cds163;Parent=gene176;Dbxref=Genbank:YP_854710.1,GeneID:4486807;Name=YP_854710.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854710.1;transl_table=11
NC_008570.1	RefSeq	gene	195253	195471	.	-	.	ID=gene177;Dbxref=GeneID:4486808;Name=AHA_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0178
NC_008570.1	RefSeq	CDS	195253	195471	.	-	0	ID=cds164;Parent=gene177;Dbxref=Genbank:YP_854711.1,GeneID:4486808;Name=YP_854711.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854711.1;transl_table=11
NC_008570.1	RefSeq	gene	195529	195963	.	-	.	ID=gene178;Dbxref=GeneID:4486809;Name=fliL-1;gbkey=Gene;gene=fliL-1;gene_biotype=protein_coding;locus_tag=AHA_0179
NC_008570.1	RefSeq	CDS	195529	195963	.	-	0	ID=cds165;Parent=gene178;Dbxref=Genbank:YP_854712.1,GeneID:4486809;Name=YP_854712.1;Note=identified by match to protein family HMM PF03748;gbkey=CDS;gene=fliL-1;product=flagellar basal body-associated protein FliL;protein_id=YP_854712.1;transl_table=11
NC_008570.1	RefSeq	gene	196109	196645	.	+	.	ID=gene179;Dbxref=GeneID:4486810;Name=AHA_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0180
NC_008570.1	RefSeq	CDS	196109	196645	.	+	0	ID=cds166;Parent=gene179;Dbxref=Genbank:YP_854713.1,GeneID:4486810;Name=YP_854713.1;Note=identified by match to protein family HMM PF04345;gbkey=CDS;product=chorismate--pyruvate lyase;protein_id=YP_854713.1;transl_table=11
NC_008570.1	RefSeq	gene	196642	197505	.	+	.	ID=gene180;Dbxref=GeneID:4486811;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AHA_0181
NC_008570.1	RefSeq	CDS	196642	197505	.	+	0	ID=cds167;Parent=gene180;Dbxref=Genbank:YP_854714.1,GeneID:4486811;Name=YP_854714.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=YP_854714.1;transl_table=11
NC_008570.1	RefSeq	gene	197570	199993	.	-	.	ID=gene181;Dbxref=GeneID:4486812;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AHA_0182
NC_008570.1	RefSeq	CDS	197570	199993	.	-	0	ID=cds168;Parent=gene181;Dbxref=Genbank:YP_854715.1,GeneID:4486812;Name=YP_854715.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;gene=plsB;product=glycerol-3-phosphate acyltransferase;protein_id=YP_854715.1;transl_table=11
NC_008570.1	RefSeq	gene	200198	200821	.	+	.	ID=gene182;Dbxref=GeneID:4486813;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AHA_0183
NC_008570.1	RefSeq	CDS	200198	200821	.	+	0	ID=cds169;Parent=gene182;Dbxref=Genbank:YP_854716.1,GeneID:4486813;Name=YP_854716.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=YP_854716.1;transl_table=11
NC_008570.1	RefSeq	gene	201261	201548	.	+	.	ID=gene183;Dbxref=GeneID:4486814;Name=AHA_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0184
NC_008570.1	RefSeq	CDS	201261	201548	.	+	0	ID=cds170;Parent=gene183;Dbxref=Genbank:YP_854717.1,GeneID:4486814;Name=YP_854717.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854717.1;transl_table=11
NC_008570.1	RefSeq	gene	201552	201671	.	-	.	ID=gene184;Dbxref=GeneID:4486815;Name=AHA_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0185
NC_008570.1	RefSeq	CDS	201552	201671	.	-	0	ID=cds171;Parent=gene184;Dbxref=Genbank:YP_854718.1,GeneID:4486815;Name=YP_854718.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854718.1;transl_table=11
NC_008570.1	RefSeq	gene	201710	202396	.	+	.	ID=gene185;Dbxref=GeneID:4486816;Name=AHA_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0186
NC_008570.1	RefSeq	CDS	201710	202396	.	+	0	ID=cds172;Parent=gene185;Dbxref=Genbank:YP_854719.1,GeneID:4486816;Name=YP_854719.1;Note=identified by match to protein family HMM PF02630;gbkey=CDS;product=SCO1/SenC family protein;protein_id=YP_854719.1;transl_table=11
NC_008570.1	RefSeq	gene	202386	203804	.	+	.	ID=gene186;Dbxref=GeneID:4486817;Name=AHA_0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0187
NC_008570.1	RefSeq	CDS	202386	203804	.	+	0	ID=cds173;Parent=gene186;Dbxref=Genbank:YP_854720.1,GeneID:4486817;Name=YP_854720.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=DNA-damage-inducible protein F;protein_id=YP_854720.1;transl_table=11
NC_008570.1	RefSeq	gene	203833	204339	.	-	.	ID=gene187;Dbxref=GeneID:4486818;Name=AHA_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0188
NC_008570.1	RefSeq	CDS	203833	204339	.	-	0	ID=cds174;Parent=gene187;Dbxref=Genbank:YP_854721.1,GeneID:4486818;Name=YP_854721.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00185;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_854721.1;transl_table=11
NC_008570.1	RefSeq	gene	204372	205727	.	-	.	ID=gene188;Dbxref=GeneID:4486819;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AHA_0189
NC_008570.1	RefSeq	CDS	204372	205727	.	-	0	ID=cds175;Parent=gene188;Dbxref=Genbank:YP_854722.1,GeneID:4486819;Name=YP_854722.1;Note=identified by similarity to SP:P08336%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;gene=cpxA;product=sensor histidine kinase CpxA;protein_id=YP_854722.1;transl_table=11
NC_008570.1	RefSeq	gene	205724	206419	.	-	.	ID=gene189;Dbxref=GeneID:4486820;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AHA_0190
NC_008570.1	RefSeq	CDS	205724	206419	.	-	0	ID=cds176;Parent=gene189;Dbxref=Genbank:YP_854723.1,GeneID:4486820;Name=YP_854723.1;Note=identified by similarity to SP:P16244%3B match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=cpxR;product=transcriptional regulatory protein CpxR;protein_id=YP_854723.1;transl_table=11
NC_008570.1	RefSeq	gene	206506	207417	.	+	.	ID=gene190;Dbxref=GeneID:4486821;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AHA_0191
NC_008570.1	RefSeq	CDS	206506	207417	.	+	0	ID=cds177;Parent=gene190;Dbxref=Genbank:YP_854724.1,GeneID:4486821;Name=YP_854724.1;Note=identified by similarity to SP:P69380%3B match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=YP_854724.1;transl_table=11
NC_008570.1	RefSeq	gene	207426	208205	.	+	.	ID=gene191;Dbxref=GeneID:4486822;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AHA_0192
NC_008570.1	RefSeq	CDS	207426	208205	.	+	0	ID=cds178;Parent=gene191;Dbxref=Genbank:YP_854725.1,GeneID:4486822;Name=YP_854725.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=YP_854725.1;transl_table=11
NC_008570.1	RefSeq	gene	208227	209507	.	+	.	ID=gene192;Dbxref=GeneID:4486823;Name=AHA_0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0193
NC_008570.1	RefSeq	CDS	208227	209507	.	+	0	ID=cds179;Parent=gene192;Dbxref=Genbank:YP_854726.1,GeneID:4486823;Name=YP_854726.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854726.1;transl_table=11
NC_008570.1	RefSeq	gene	209553	209951	.	+	.	ID=gene193;Dbxref=GeneID:4486824;Name=AHA_0194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0194
NC_008570.1	RefSeq	CDS	209553	209951	.	+	0	ID=cds180;Parent=gene193;Dbxref=Genbank:YP_854727.1,GeneID:4486824;Name=YP_854727.1;Note=identified by match to protein family HMM PF06005;gbkey=CDS;product=transcriptional regulator;protein_id=YP_854727.1;transl_table=11
NC_008570.1	RefSeq	gene	210025	210675	.	-	.	ID=gene194;Dbxref=GeneID:4486825;Name=AHA_0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0195
NC_008570.1	RefSeq	CDS	210025	210675	.	-	0	ID=cds181;Parent=gene194;Dbxref=Genbank:YP_854728.1,GeneID:4486825;Name=YP_854728.1;Note=identified by match to protein family HMM PF01965;gbkey=CDS;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=YP_854728.1;transl_table=11
NC_008570.1	RefSeq	gene	211076	213829	.	+	.	ID=gene195;Dbxref=GeneID:4489080;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AHA_0196
NC_008570.1	RefSeq	CDS	211076	213829	.	+	0	ID=cds182;Parent=gene195;Dbxref=Genbank:YP_854729.1,GeneID:4489080;Name=YP_854729.1;Note=identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF01612%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=YP_854729.1;transl_table=11
NC_008570.1	RefSeq	gene	213909	214448	.	-	.	ID=gene196;Dbxref=GeneID:4489081;Name=AHA_0197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0197
NC_008570.1	RefSeq	CDS	213909	214448	.	-	0	ID=cds183;Parent=gene196;Dbxref=Genbank:YP_854730.1,GeneID:4489081;Name=YP_854730.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_854730.1;transl_table=11
NC_008570.1	RefSeq	gene	214907	216456	.	+	.	ID=gene197;Dbxref=GeneID:4489082;Name=rrsC;gbkey=Gene;gene=rrsC;gene_biotype=rRNA;locus_tag=AHA_0198
NC_008570.1	RefSeq	rRNA	214907	216456	.	+	.	ID=rna13;Parent=gene197;Dbxref=GeneID:4489082;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	214907	216456	.	+	.	ID=id14;Parent=rna13;Dbxref=GeneID:4489082;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	216523	216599	.	+	.	ID=gene198;Dbxref=GeneID:4489083;Name=AHA_0199;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0199
NC_008570.1	RefSeq	tRNA	216523	216599	.	+	.	ID=rna14;Parent=gene198;Dbxref=GeneID:4489083;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	exon	216523	216599	.	+	.	ID=id15;Parent=rna14;Dbxref=GeneID:4489083;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	gene	216610	216685	.	+	.	ID=gene199;Dbxref=GeneID:4489084;Name=AHA_0200;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0200
NC_008570.1	RefSeq	tRNA	216610	216685	.	+	.	ID=rna15;Parent=gene199;Dbxref=GeneID:4489084;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	216610	216685	.	+	.	ID=id16;Parent=rna15;Dbxref=GeneID:4489084;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	216926	219814	.	+	.	ID=gene200;Dbxref=GeneID:4489085;Name=rrlC;gbkey=Gene;gene=rrlC;gene_biotype=rRNA;locus_tag=AHA_0201
NC_008570.1	RefSeq	rRNA	216926	219814	.	+	.	ID=rna16;Parent=gene200;Dbxref=GeneID:4489085;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	216926	219814	.	+	.	ID=id17;Parent=rna16;Dbxref=GeneID:4489085;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	219923	220053	.	+	.	ID=gene201;Dbxref=GeneID:5309692;Name=AHA_0201a;gbkey=Gene;gene_biotype=rRNA;locus_tag=AHA_0201a
NC_008570.1	RefSeq	rRNA	219923	220053	.	+	.	ID=rna17;Parent=gene201;Dbxref=GeneID:5309692;gbkey=rRNA;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	219923	220053	.	+	.	ID=id18;Parent=rna17;Dbxref=GeneID:5309692;gbkey=rRNA;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	220152	220227	.	+	.	ID=gene202;Dbxref=GeneID:4489086;Name=AHA_0202;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0202
NC_008570.1	RefSeq	tRNA	220152	220227	.	+	.	ID=rna18;Parent=gene202;Dbxref=GeneID:4489086;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	exon	220152	220227	.	+	.	ID=id19;Parent=rna18;Dbxref=GeneID:4489086;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	gene	220249	220368	.	+	.	ID=gene203;Dbxref=GeneID:4489087;Name=rrfC;gbkey=Gene;gene=rrfC;gene_biotype=rRNA;locus_tag=AHA_0203
NC_008570.1	RefSeq	rRNA	220249	220368	.	+	.	ID=rna19;Parent=gene203;Dbxref=GeneID:4489087;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	220249	220368	.	+	.	ID=id20;Parent=rna19;Dbxref=GeneID:4489087;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	220520	221485	.	+	.	ID=gene204;Dbxref=GeneID:4489088;Name=AHA_0204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0204
NC_008570.1	RefSeq	CDS	220520	221485	.	+	0	ID=cds184;Parent=gene204;Dbxref=Genbank:YP_854731.1,GeneID:4489088;Name=YP_854731.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=DNA-binding transcriptional repressor EbgR;protein_id=YP_854731.1;transl_table=11
NC_008570.1	RefSeq	gene	221807	224881	.	+	.	ID=gene205;Dbxref=GeneID:4489089;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AHA_0205
NC_008570.1	RefSeq	CDS	221807	224881	.	+	0	ID=cds185;Parent=gene205;Dbxref=Genbank:YP_854732.1,GeneID:4489089;Name=YP_854732.1;Note=in Escherichia coli this is the second beta-galactosidase system;gbkey=CDS;gene=ebgA;product=cryptic beta-D-galactosidase subunit alpha;protein_id=YP_854732.1;transl_table=11
NC_008570.1	RefSeq	gene	224878	225333	.	+	.	ID=gene206;Dbxref=GeneID:4489090;Name=AHA_0206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0206
NC_008570.1	RefSeq	CDS	224878	225333	.	+	0	ID=cds186;Parent=gene206;Dbxref=Genbank:YP_854733.2,GeneID:4489090;Name=YP_854733.2;Note=identified by match to protein family HMM PF04074;gbkey=CDS;product=evolved beta-D-galactosidase%2C beta subunit%3B cryptic gene;protein_id=YP_854733.2;transl_table=11
NC_008570.1	RefSeq	gene	225436	226881	.	+	.	ID=gene207;Dbxref=GeneID:4489091;Name=AHA_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0207
NC_008570.1	RefSeq	CDS	225436	226881	.	+	0	ID=cds187;Parent=gene207;Dbxref=Genbank:YP_854734.1,GeneID:4489091;Name=YP_854734.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=inner membrane transporter YgjI;protein_id=YP_854734.1;transl_table=11
NC_008570.1	RefSeq	gene	226910	227296	.	+	.	ID=gene208;Dbxref=GeneID:4489092;Name=AHA_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0208
NC_008570.1	RefSeq	CDS	226910	227296	.	+	0	ID=cds188;Parent=gene208;Dbxref=Genbank:YP_854735.1,GeneID:4489092;Name=YP_854735.1;Note=identified by match to protein family HMM PF01588;gbkey=CDS;product=hypothetical protein;protein_id=YP_854735.1;transl_table=11
NC_008570.1	RefSeq	gene	227463	228899	.	+	.	ID=gene209;Dbxref=GeneID:4489093;Name=AHA_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0209
NC_008570.1	RefSeq	CDS	227463	228899	.	+	0	ID=cds189;Parent=gene209;Dbxref=Genbank:YP_854736.1,GeneID:4489093;Name=YP_854736.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=YP_854736.1;transl_table=11
NC_008570.1	RefSeq	gene	229111	230082	.	+	.	ID=gene210;Dbxref=GeneID:4489094;Name=AHA_0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0210
NC_008570.1	RefSeq	CDS	229111	230082	.	+	0	ID=cds190;Parent=gene210;Dbxref=Genbank:YP_854737.1,GeneID:4489094;Name=YP_854737.1;gbkey=CDS;product=sodium/bile acid symporter family protein;protein_id=YP_854737.1;transl_table=11
NC_008570.1	RefSeq	gene	230140	232290	.	-	.	ID=gene211;Dbxref=GeneID:4489095;Name=AHA_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0211
NC_008570.1	RefSeq	CDS	230140	232290	.	-	0	ID=cds191;Parent=gene211;Dbxref=Genbank:YP_854738.1,GeneID:4489095;Name=YP_854738.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=generic methyltransferase;protein_id=YP_854738.1;transl_table=11
NC_008570.1	RefSeq	gene	232655	233377	.	+	.	ID=gene212;Dbxref=GeneID:4489096;Name=AHA_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0212
NC_008570.1	RefSeq	CDS	232655	233377	.	+	0	ID=cds192;Parent=gene212;Dbxref=Genbank:YP_854739.1,GeneID:4489096;Name=YP_854739.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854739.1;transl_table=11
NC_008570.1	RefSeq	gene	233431	234267	.	-	.	ID=gene213;Dbxref=GeneID:4489097;Name=AHA_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0213
NC_008570.1	RefSeq	CDS	233431	234267	.	-	0	ID=cds193;Parent=gene213;Dbxref=Genbank:YP_854740.1,GeneID:4489097;Name=YP_854740.1;Note=identified by match to protein family HMM PF00756%3B match to protein family HMM TIGR02821;gbkey=CDS;product=esterase YeiG;protein_id=YP_854740.1;transl_table=11
NC_008570.1	RefSeq	gene	234317	235444	.	-	.	ID=gene214;Dbxref=GeneID:4489098;Name=AHA_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0214
NC_008570.1	RefSeq	CDS	234317	235444	.	-	0	ID=cds194;Parent=gene214;Dbxref=Genbank:YP_854741.1,GeneID:4489098;Name=YP_854741.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM TIGR02818;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_854741.1;transl_table=11
NC_008570.1	RefSeq	gene	235564	236469	.	+	.	ID=gene215;Dbxref=GeneID:4487724;Name=AHA_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0215
NC_008570.1	RefSeq	CDS	235564	236469	.	+	0	ID=cds195;Parent=gene215;Dbxref=Genbank:YP_854742.1,GeneID:4487724;Name=YP_854742.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_854742.1;transl_table=11
NC_008570.1	RefSeq	gene	236526	237491	.	-	.	ID=gene216;Dbxref=GeneID:4487725;Name=AHA_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0216
NC_008570.1	RefSeq	CDS	236526	237491	.	-	0	ID=cds196;Parent=gene216;Dbxref=Genbank:YP_854743.1,GeneID:4487725;Name=YP_854743.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter permease;protein_id=YP_854743.1;transl_table=11
NC_008570.1	RefSeq	gene	237494	238609	.	-	.	ID=gene217;Dbxref=GeneID:4487726;Name=AHA_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0217
NC_008570.1	RefSeq	CDS	237494	238609	.	-	0	ID=cds197;Parent=gene217;Dbxref=Genbank:YP_854744.1,GeneID:4487726;Name=YP_854744.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter permease;protein_id=YP_854744.1;transl_table=11
NC_008570.1	RefSeq	gene	238692	240272	.	-	.	ID=gene218;Dbxref=GeneID:4487727;Name=AHA_0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0218
NC_008570.1	RefSeq	CDS	238692	240272	.	-	0	ID=cds198;Parent=gene218;Dbxref=Genbank:YP_854745.1,GeneID:4487727;Name=YP_854745.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide);protein_id=YP_854745.1;transl_table=11
NC_008570.1	RefSeq	gene	240356	241459	.	-	.	ID=gene219;Dbxref=GeneID:4487728;Name=AHA_0219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0219
NC_008570.1	RefSeq	CDS	240356	241459	.	-	0	ID=cds199;Parent=gene219;Dbxref=Genbank:YP_854746.1,GeneID:4487728;Name=YP_854746.1;Note=identified by match to protein family HMM PF02608;gbkey=CDS;product=membrane lipoprotein;protein_id=YP_854746.1;transl_table=11
NC_008570.1	RefSeq	gene	241787	243958	.	+	.	ID=gene220;Dbxref=GeneID:4487729;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=AHA_0220
NC_008570.1	RefSeq	CDS	241787	243958	.	+	0	ID=cds200;Parent=gene220;Dbxref=Genbank:YP_854747.1,GeneID:4487729;Name=YP_854747.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01075;gbkey=CDS;gene=uvrD;product=DNA helicase II;protein_id=YP_854747.1;transl_table=11
NC_008570.1	RefSeq	gene	244058	245614	.	-	.	ID=gene221;Dbxref=GeneID:4487730;Name=AHA_0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0221
NC_008570.1	RefSeq	CDS	244058	245614	.	-	0	ID=cds201;Parent=gene221;Dbxref=Genbank:YP_854748.1,GeneID:4487730;Name=YP_854748.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854748.1;transl_table=11
NC_008570.1	RefSeq	gene	245611	246813	.	-	.	ID=gene222;Dbxref=GeneID:4487731;Name=AHA_0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0222
NC_008570.1	RefSeq	CDS	245611	246813	.	-	0	ID=cds202;Parent=gene222;Dbxref=Genbank:YP_854749.1,GeneID:4487731;Name=YP_854749.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854749.1;transl_table=11
NC_008570.1	RefSeq	gene	246810	247247	.	-	.	ID=gene223;Dbxref=GeneID:4487732;Name=AHA_0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0223
NC_008570.1	RefSeq	CDS	246810	247247	.	-	0	ID=cds203;Parent=gene223;Dbxref=Genbank:YP_854750.1,GeneID:4487732;Name=YP_854750.1;gbkey=CDS;product=lipoprotein;protein_id=YP_854750.1;transl_table=11
NC_008570.1	RefSeq	gene	247422	247934	.	+	.	ID=gene224;Dbxref=GeneID:4487733;Name=AHA_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0224
NC_008570.1	RefSeq	CDS	247422	247934	.	+	0	ID=cds204;Parent=gene224;Dbxref=Genbank:YP_854751.1,GeneID:4487733;Name=YP_854751.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854751.1;transl_table=11
NC_008570.1	RefSeq	gene	248027	249187	.	-	.	ID=gene225;Dbxref=GeneID:4487734;Name=AHA_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0225
NC_008570.1	RefSeq	CDS	248027	249187	.	-	0	ID=cds205;Parent=gene225;Dbxref=Genbank:YP_854752.1,GeneID:4487734;Name=YP_854752.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854752.1;transl_table=11
NC_008570.1	RefSeq	gene	249679	249876	.	-	.	ID=gene226;Dbxref=GeneID:4487735;Name=AHA_0226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0226
NC_008570.1	RefSeq	CDS	249679	249876	.	-	0	ID=cds206;Parent=gene226;Dbxref=Genbank:YP_854753.1,GeneID:4487735;Name=YP_854753.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854753.1;transl_table=11
NC_008570.1	RefSeq	gene	250157	250657	.	+	.	ID=gene227;Dbxref=GeneID:4487736;Name=AHA_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0227
NC_008570.1	RefSeq	CDS	250157	250657	.	+	0	ID=cds207;Parent=gene227;Dbxref=Genbank:YP_854754.1,GeneID:4487736;Name=YP_854754.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854754.1;transl_table=11
NC_008570.1	RefSeq	gene	250746	251195	.	-	.	ID=gene228;Dbxref=GeneID:4487737;Name=AHA_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0228
NC_008570.1	RefSeq	CDS	250746	251195	.	-	0	ID=cds208;Parent=gene228;Dbxref=Genbank:YP_854755.1,GeneID:4487737;Name=YP_854755.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854755.1;transl_table=11
NC_008570.1	RefSeq	gene	251276	251788	.	-	.	ID=gene229;Dbxref=GeneID:4487738;Name=AHA_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0229
NC_008570.1	RefSeq	CDS	251276	251788	.	-	0	ID=cds209;Parent=gene229;Dbxref=Genbank:YP_854756.1,GeneID:4487738;Name=YP_854756.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;product=hemolysin;protein_id=YP_854756.1;transl_table=11
NC_008570.1	RefSeq	gene	251886	252542	.	-	.	ID=gene230;Dbxref=GeneID:4487739;Name=AHA_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0230
NC_008570.1	RefSeq	CDS	251886	252542	.	-	0	ID=cds210;Parent=gene230;Dbxref=Genbank:YP_854757.1,GeneID:4487739;Name=YP_854757.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854757.1;transl_table=11
NC_008570.1	RefSeq	gene	252751	253488	.	+	.	ID=gene231;Dbxref=GeneID:4487740;Name=AHA_0231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0231
NC_008570.1	RefSeq	CDS	252751	253488	.	+	0	ID=cds211;Parent=gene231;Dbxref=Genbank:YP_854758.1,GeneID:4487740;Name=YP_854758.1;Note=identified by match to protein family HMM PF06206;gbkey=CDS;product=hypothetical protein;protein_id=YP_854758.1;transl_table=11
NC_008570.1	RefSeq	gene	253498	254166	.	-	.	ID=gene232;Dbxref=GeneID:4487741;Name=AHA_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0232
NC_008570.1	RefSeq	CDS	253498	254166	.	-	0	ID=cds212;Parent=gene232;Dbxref=Genbank:YP_854759.1,GeneID:4487741;Name=YP_854759.1;Note=identified by match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_854759.1;transl_table=11
NC_008570.1	RefSeq	gene	254191	254382	.	-	.	ID=gene233;Dbxref=GeneID:4487742;Name=AHA_0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0233
NC_008570.1	RefSeq	CDS	254191	254382	.	-	0	ID=cds213;Parent=gene233;Dbxref=Genbank:YP_854760.1,GeneID:4487742;Name=YP_854760.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;product=transcriptional regulatory protein;protein_id=YP_854760.1;transl_table=11
NC_008570.1	RefSeq	gene	254484	255104	.	+	.	ID=gene234;Dbxref=GeneID:4487743;Name=AHA_0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0234
NC_008570.1	RefSeq	CDS	254484	255104	.	+	0	ID=cds214;Parent=gene234;Dbxref=Genbank:YP_854761.1,GeneID:4487743;Name=YP_854761.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=lysine exporter protein;protein_id=YP_854761.1;transl_table=11
NC_008570.1	RefSeq	gene	255180	256424	.	+	.	ID=gene235;Dbxref=GeneID:4488693;Name=AHA_0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0235
NC_008570.1	RefSeq	CDS	255180	256424	.	+	0	ID=cds215;Parent=gene235;Dbxref=Genbank:YP_854762.1,GeneID:4488693;Name=YP_854762.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854762.1;transl_table=11
NC_008570.1	RefSeq	gene	256511	257545	.	-	.	ID=gene236;Dbxref=GeneID:4488694;Name=AHA_0236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0236
NC_008570.1	RefSeq	CDS	256511	257545	.	-	0	ID=cds216;Parent=gene236;Dbxref=Genbank:YP_854763.1,GeneID:4488694;Name=YP_854763.1;Note=identified by match to protein family HMM PF04143;gbkey=CDS;product=hypothetical protein;protein_id=YP_854763.1;transl_table=11
NC_008570.1	RefSeq	gene	257746	259491	.	-	.	ID=gene237;Dbxref=GeneID:4488695;Name=AHA_0237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0237
NC_008570.1	RefSeq	CDS	257746	259491	.	-	0	ID=cds217;Parent=gene237;Dbxref=Genbank:YP_854764.1,GeneID:4488695;Name=YP_854764.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_854764.1;transl_table=11
NC_008570.1	RefSeq	gene	260599	263367	.	+	.	ID=gene238;Dbxref=GeneID:4488696;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AHA_0238
NC_008570.1	RefSeq	CDS	260599	263367	.	+	0	ID=cds218;Parent=gene238;Dbxref=Genbank:YP_854765.1,GeneID:4488696;Name=YP_854765.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524;gbkey=CDS;gene=mgtA;product=magnesium-translocating P-type ATPase;protein_id=YP_854765.1;transl_table=11
NC_008570.1	RefSeq	gene	263467	264210	.	-	.	ID=gene239;Dbxref=GeneID:4486940;Name=AHA_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0239
NC_008570.1	RefSeq	CDS	263467	264210	.	-	0	ID=cds219;Parent=gene239;Dbxref=Genbank:YP_854766.1,GeneID:4486940;Name=YP_854766.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_854766.1;transl_table=11
NC_008570.1	RefSeq	gene	264194	265012	.	-	.	ID=gene240;Dbxref=GeneID:4486941;Name=AHA_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0240
NC_008570.1	RefSeq	CDS	264194	265012	.	-	0	ID=cds220;Parent=gene240;Dbxref=Genbank:YP_854767.1,GeneID:4486941;Name=YP_854767.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_854767.1;transl_table=11
NC_008570.1	RefSeq	gene	265080	265982	.	-	.	ID=gene241;Dbxref=GeneID:4486942;Name=rarD-1;gbkey=Gene;gene=rarD-1;gene_biotype=protein_coding;locus_tag=AHA_0241
NC_008570.1	RefSeq	CDS	265080	265982	.	-	0	ID=cds221;Parent=gene241;Dbxref=Genbank:YP_854768.1,GeneID:4486942;Name=YP_854768.1;Note=identified by match to protein family HMM PF00892%3B match to protein family HMM TIGR00688;gbkey=CDS;gene=rarD-1;product=RarD protein;protein_id=YP_854768.1;transl_table=11
NC_008570.1	RefSeq	gene	266108	266398	.	-	.	ID=gene242;Dbxref=GeneID:4486943;Name=AHA_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0242
NC_008570.1	RefSeq	CDS	266108	266398	.	-	0	ID=cds222;Parent=gene242;Dbxref=Genbank:YP_854769.1,GeneID:4486943;Name=YP_854769.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854769.1;transl_table=11
NC_008570.1	RefSeq	gene	266407	267903	.	-	.	ID=gene243;Dbxref=GeneID:4486944;Name=AHA_0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0243
NC_008570.1	RefSeq	CDS	266407	267903	.	-	0	ID=cds223;Parent=gene243;Dbxref=Genbank:YP_854770.1,GeneID:4486944;Name=YP_854770.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_854770.1;transl_table=11
NC_008570.1	RefSeq	gene	268165	268707	.	-	.	ID=gene244;Dbxref=GeneID:4486945;Name=AHA_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0244
NC_008570.1	RefSeq	CDS	268165	268707	.	-	0	ID=cds224;Parent=gene244;Dbxref=Genbank:YP_854772.1,GeneID:4486945;Name=YP_854772.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883;gbkey=CDS;product=DNA-binding protein;protein_id=YP_854772.1;transl_table=11
NC_008570.1	RefSeq	gene	268893	270224	.	+	.	ID=gene245;Dbxref=GeneID:4486946;Name=AHA_0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0245
NC_008570.1	RefSeq	CDS	268893	270224	.	+	0	ID=cds225;Parent=gene245;Dbxref=Genbank:YP_854773.1,GeneID:4486946;Name=YP_854773.1;Note=catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate;gbkey=CDS;product=beta alanine--pyruvate transaminase;protein_id=YP_854773.1;transl_table=11
NC_008570.1	RefSeq	gene	270323	271819	.	+	.	ID=gene246;Dbxref=GeneID:4486947;Name=mmsA-1;gbkey=Gene;gene=mmsA-1;gene_biotype=protein_coding;locus_tag=AHA_0246
NC_008570.1	RefSeq	CDS	270323	271819	.	+	0	ID=cds226;Parent=gene246;Dbxref=Genbank:YP_854774.1,GeneID:4486947;Name=YP_854774.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01722;gbkey=CDS;gene=mmsA-1;product=methylmalonate-semialdehyde dehydrogenase;protein_id=YP_854774.1;transl_table=11
NC_008570.1	RefSeq	gene	271904	272659	.	+	.	ID=gene247;Dbxref=GeneID:4486948;Name=AHA_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0247
NC_008570.1	RefSeq	CDS	271904	272659	.	+	0	ID=cds227;Parent=gene247;Dbxref=Genbank:YP_854775.1,GeneID:4486948;Name=YP_854775.1;Note=identified by match to protein family HMM PF00117;gbkey=CDS;product=glutamine amidotransferase;protein_id=YP_854775.1;transl_table=11
NC_008570.1	RefSeq	gene	272656	273771	.	+	.	ID=gene248;Dbxref=GeneID:4486949;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=AHA_0248
NC_008570.1	RefSeq	CDS	272656	273771	.	+	0	ID=cds228;Parent=gene248;Dbxref=Genbank:YP_854776.1,GeneID:4486949;Name=YP_854776.1;Note=identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518;gbkey=CDS;gene=ald;product=alanine dehydrogenase;protein_id=YP_854776.1;transl_table=11
NC_008570.1	RefSeq	gene	273891	274730	.	+	.	ID=gene249;Dbxref=GeneID:4486950;Name=AHA_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0249
NC_008570.1	RefSeq	CDS	273891	274730	.	+	0	ID=cds229;Parent=gene249;Dbxref=Genbank:YP_854777.1,GeneID:4486950;Name=YP_854777.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_854777.1;transl_table=11
NC_008570.1	RefSeq	gene	275030	275482	.	+	.	ID=gene250;Dbxref=GeneID:4486951;Name=AHA_0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0250
NC_008570.1	RefSeq	CDS	275030	275482	.	+	0	ID=cds230;Parent=gene250;Dbxref=Genbank:YP_854778.1,GeneID:4486951;Name=YP_854778.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;product=Rrf2 family protein;protein_id=YP_854778.1;transl_table=11
NC_008570.1	RefSeq	gene	275541	276053	.	-	.	ID=gene251;Dbxref=GeneID:4486952;Name=AHA_0251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0251
NC_008570.1	RefSeq	CDS	275541	276053	.	-	0	ID=cds231;Parent=gene251;Dbxref=Genbank:YP_854779.1,GeneID:4486952;Name=YP_854779.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=NapF protein;protein_id=YP_854779.1;transl_table=11
NC_008570.1	RefSeq	gene	276180	276407	.	+	.	ID=gene252;Dbxref=GeneID:4486953;Name=AHA_0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0252
NC_008570.1	RefSeq	CDS	276180	276407	.	+	0	ID=cds232;Parent=gene252;Dbxref=Genbank:YP_854780.1,GeneID:4486953;Name=YP_854780.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854780.1;transl_table=11
NC_008570.1	RefSeq	gene	276404	277744	.	+	.	ID=gene253;Dbxref=GeneID:4486954;Name=AHA_0253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0253
NC_008570.1	RefSeq	CDS	276404	277744	.	+	0	ID=cds233;Parent=gene253;Dbxref=Genbank:YP_854781.1,GeneID:4486954;Name=YP_854781.1;Note=identified by match to protein family HMM PF02646;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=YP_854781.1;transl_table=11
NC_008570.1	RefSeq	gene	277850	279292	.	-	.	ID=gene254;Dbxref=GeneID:4486955;Name=AHA_0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0254
NC_008570.1	RefSeq	CDS	277850	279292	.	-	0	ID=cds234;Parent=gene254;Dbxref=Genbank:YP_854782.1,GeneID:4486955;Name=YP_854782.1;Note=identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933;gbkey=CDS;product=TrkH protein;protein_id=YP_854782.1;transl_table=11
NC_008570.1	RefSeq	gene	279389	280765	.	-	.	ID=gene255;Dbxref=GeneID:4486956;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=AHA_0255
NC_008570.1	RefSeq	CDS	279389	280765	.	-	0	ID=cds235;Parent=gene255;Dbxref=Genbank:YP_854783.1,GeneID:4486956;Name=YP_854783.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=YP_854783.1;transl_table=11
NC_008570.1	RefSeq	gene	280913	282205	.	-	.	ID=gene256;Dbxref=GeneID:4486957;Name=sun;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=AHA_0256
NC_008570.1	RefSeq	CDS	280913	282205	.	-	0	ID=cds236;Parent=gene256;Dbxref=Genbank:YP_854784.1,GeneID:4486957;Name=YP_854784.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563;gbkey=CDS;gene=sun;product=ribosomal RNA small subunit methyltransferase B;protein_id=YP_854784.1;transl_table=11
NC_008570.1	RefSeq	gene	282262	283206	.	-	.	ID=gene257;Dbxref=GeneID:4486958;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AHA_0257
NC_008570.1	RefSeq	CDS	282262	283206	.	-	0	ID=cds237;Parent=gene257;Dbxref=Genbank:YP_854785.1,GeneID:4486958;Name=YP_854785.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=YP_854785.1;transl_table=11
NC_008570.1	RefSeq	gene	283219	283731	.	-	.	ID=gene258;Dbxref=GeneID:4490189;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AHA_0258
NC_008570.1	RefSeq	CDS	283219	283731	.	-	0	ID=cds238;Parent=gene258;Dbxref=Genbank:YP_854786.1,GeneID:4490189;Name=YP_854786.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=YP_854786.1;transl_table=11
NC_008570.1	RefSeq	gene	283840	284928	.	+	.	ID=gene259;Dbxref=GeneID:4490190;Name=AHA_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0259
NC_008570.1	RefSeq	CDS	283840	284928	.	+	0	ID=cds239;Parent=gene259;Dbxref=Genbank:YP_854787.1,GeneID:4490190;Name=YP_854787.1;Note=identified by match to protein family HMM PF01476;gbkey=CDS;product=LysM domain-containing protein;protein_id=YP_854787.1;transl_table=11
NC_008570.1	RefSeq	gene	284930	286045	.	+	.	ID=gene260;Dbxref=GeneID:4490191;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AHA_0260
NC_008570.1	RefSeq	CDS	284930	286045	.	+	0	ID=cds240;Parent=gene260;Dbxref=Genbank:YP_854788.1,GeneID:4490191;Name=YP_854788.1;Note=identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;gene=dprA;product=DNA protecting protein DprA;protein_id=YP_854788.1;transl_table=11
NC_008570.1	RefSeq	gene	286038	286511	.	+	.	ID=gene261;Dbxref=GeneID:4490192;Name=AHA_0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0261
NC_008570.1	RefSeq	CDS	286038	286511	.	+	0	ID=cds241;Parent=gene261;Dbxref=Genbank:YP_854789.1,GeneID:4490192;Name=YP_854789.1;Note=identified by match to protein family HMM PF04361;gbkey=CDS;product=hypothetical protein;protein_id=YP_854789.1;transl_table=11
NC_008570.1	RefSeq	gene	286567	287124	.	+	.	ID=gene262;Dbxref=GeneID:4490193;Name=AHA_0262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0262
NC_008570.1	RefSeq	CDS	286567	287124	.	+	0	ID=cds242;Parent=gene262;Dbxref=Genbank:YP_854790.1,GeneID:4490193;Name=YP_854790.1;Note=identified by match to protein family HMM PF01396;gbkey=CDS;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=YP_854790.1;transl_table=11
NC_008570.1	RefSeq	gene	287199	287702	.	+	.	ID=gene263;Dbxref=GeneID:4490194;Name=purE-2;gbkey=Gene;gene=purE-2;gene_biotype=protein_coding;locus_tag=AHA_0263
NC_008570.1	RefSeq	CDS	287199	287702	.	+	0	ID=cds243;Parent=gene263;Dbxref=Genbank:YP_854791.1,GeneID:4490194;Name=YP_854791.1;Note=identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE-2;product=phosphoribosylaminoimidazole carboxylase catalytic subunit;protein_id=YP_854791.1;transl_table=11
NC_008570.1	RefSeq	gene	287837	288397	.	+	.	ID=gene264;Dbxref=GeneID:4490195;Name=AHA_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0264
NC_008570.1	RefSeq	CDS	287837	288397	.	+	0	ID=cds244;Parent=gene264;Dbxref=Genbank:YP_854792.1,GeneID:4490195;Name=YP_854792.1;Note=identified by match to protein family HMM PF01300;gbkey=CDS;product=Sua5/YciO/YrdC family protein;protein_id=YP_854792.1;transl_table=11
NC_008570.1	RefSeq	gene	288492	289400	.	+	.	ID=gene265;Dbxref=GeneID:4490196;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AHA_0265
NC_008570.1	RefSeq	CDS	288492	289400	.	+	0	ID=cds245;Parent=gene265;Dbxref=Genbank:YP_854793.1,GeneID:4490196;Name=YP_854793.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;gene=hemF;product=coproporphyrinogen III oxidase;protein_id=YP_854793.1;transl_table=11
NC_008570.1	RefSeq	gene	289504	290325	.	+	.	ID=gene266;Dbxref=GeneID:4490197;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AHA_0266
NC_008570.1	RefSeq	CDS	289504	290325	.	+	0	ID=cds246;Parent=gene266;Dbxref=Genbank:YP_854794.1,GeneID:4490197;Name=YP_854794.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=YP_854794.1;transl_table=11
NC_008570.1	RefSeq	gene	290322	290582	.	+	.	ID=gene267;Dbxref=GeneID:4490198;Name=AHA_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0267
NC_008570.1	RefSeq	CDS	290322	290582	.	+	0	ID=cds247;Parent=gene267;Dbxref=Genbank:YP_854795.1,GeneID:4490198;Name=YP_854795.1;Note=identified by match to protein family HMM PF07369;gbkey=CDS;product=hypothetical protein;protein_id=YP_854795.1;transl_table=11
NC_008570.1	RefSeq	gene	291373	292023	.	-	.	ID=gene268;Dbxref=GeneID:4490199;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;locus_tag=AHA_0268
NC_008570.1	RefSeq	CDS	291373	292023	.	-	0	ID=cds248;Parent=gene268;Dbxref=Genbank:YP_854796.1,GeneID:4490199;Name=YP_854796.1;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_854796.1;transl_table=11
NC_008570.1	RefSeq	gene	292127	292783	.	+	.	ID=gene269;Dbxref=GeneID:4490200;Name=AHA_0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0269
NC_008570.1	RefSeq	CDS	292127	292783	.	+	0	ID=cds249;Parent=gene269;Dbxref=Genbank:YP_854797.1,GeneID:4490200;Name=YP_854797.1;Note=identified by match to protein family HMM PF00034;gbkey=CDS;product=cytochrome c4;protein_id=YP_854797.1;transl_table=11
NC_008570.1	RefSeq	gene	293413	294189	.	+	.	ID=gene270;Dbxref=GeneID:4490201;Name=AHA_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0270
NC_008570.1	RefSeq	CDS	293413	294189	.	+	0	ID=cds250;Parent=gene270;Dbxref=Genbank:YP_854798.1,GeneID:4490201;Name=YP_854798.1;Note=identified by match to protein family HMM PF04220;gbkey=CDS;product=hypothetical protein;protein_id=YP_854798.1;transl_table=11
NC_008570.1	RefSeq	gene	294201	294641	.	+	.	ID=gene271;Dbxref=GeneID:4490202;Name=AHA_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0271
NC_008570.1	RefSeq	CDS	294201	294641	.	+	0	ID=cds251;Parent=gene271;Dbxref=Genbank:YP_854799.1,GeneID:4490202;Name=YP_854799.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854799.1;transl_table=11
NC_008570.1	RefSeq	gene	294669	296042	.	+	.	ID=gene272;Dbxref=GeneID:4490203;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AHA_0272
NC_008570.1	RefSeq	CDS	294669	296042	.	+	0	ID=cds252;Parent=gene272;Dbxref=Genbank:YP_854800.1,GeneID:4490203;Name=YP_854800.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;gene=hemN;product=coproporphyrinogen III oxidase;protein_id=YP_854800.1;transl_table=11
NC_008570.1	RefSeq	gene	296111	297112	.	-	.	ID=gene273;Dbxref=GeneID:4490204;Name=add-1;gbkey=Gene;gene=add-1;gene_biotype=protein_coding;locus_tag=AHA_0273
NC_008570.1	RefSeq	CDS	296111	297112	.	-	0	ID=cds253;Parent=gene273;Dbxref=Genbank:YP_854801.1,GeneID:4490204;Name=YP_854801.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=add-1;product=adenosine deaminase;protein_id=YP_854801.1;transl_table=11
NC_008570.1	RefSeq	gene	297254	298672	.	-	.	ID=gene274;Dbxref=GeneID:4490205;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=AHA_0274
NC_008570.1	RefSeq	CDS	297254	298672	.	-	0	ID=cds254;Parent=gene274;Dbxref=Genbank:YP_854802.1,GeneID:4490205;Name=YP_854802.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM TIGR01818;gbkey=CDS;gene=ntrC;product=nitrogen regulation protein NR(I);protein_id=YP_854802.1;transl_table=11
NC_008570.1	RefSeq	gene	298682	299737	.	-	.	ID=gene275;Dbxref=GeneID:4490206;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AHA_0275
NC_008570.1	RefSeq	CDS	298682	299737	.	-	0	ID=cds255;Parent=gene275;Dbxref=Genbank:YP_854803.1,GeneID:4490206;Name=YP_854803.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=nitrogen regulation protein NR(II);protein_id=YP_854803.1;transl_table=11
NC_008570.1	RefSeq	gene	299818	300399	.	-	.	ID=gene276;Dbxref=GeneID:4490207;Name=AHA_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0276
NC_008570.1	RefSeq	CDS	299818	300399	.	-	0	ID=cds256;Parent=gene276;Dbxref=Genbank:YP_854804.1,GeneID:4490207;Name=YP_854804.1;Note=identified by similarity to GB:AAN57435.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854804.1;transl_table=11
NC_008570.1	RefSeq	gene	300492	301901	.	-	.	ID=gene277;Dbxref=GeneID:4490208;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AHA_0277
NC_008570.1	RefSeq	CDS	300492	301901	.	-	0	ID=cds257;Parent=gene277;Dbxref=Genbank:YP_854805.1,GeneID:4490208;Name=YP_854805.1;Note=identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=YP_854805.1;transl_table=11
NC_008570.1	RefSeq	gene	302253	304064	.	+	.	ID=gene278;Dbxref=GeneID:4490436;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AHA_0278
NC_008570.1	RefSeq	CDS	302253	304064	.	+	0	ID=cds258;Parent=gene278;Dbxref=Genbank:YP_854806.1,GeneID:4490436;Name=YP_854806.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394;gbkey=CDS;gene=typA;product=GTP-binding protein TypA;protein_id=YP_854806.1;transl_table=11
NC_008570.1	RefSeq	gene	304238	305110	.	+	.	ID=gene279;Dbxref=GeneID:4490437;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AHA_0279
NC_008570.1	RefSeq	CDS	304238	305110	.	+	0	ID=cds259;Parent=gene279;Dbxref=Genbank:YP_854807.1,GeneID:4490437;Name=YP_854807.1;Note=RNase BN%3B required for 3' maturation of certain phage T4-encoded tRNAs%3B forms a dimer%3B specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence%3B 3' to 5' exoribonuclease;gbkey=CDS;gene=rbn;product=ribonuclease BN;protein_id=YP_854807.1;transl_table=11
NC_008570.1	RefSeq	gene	305191	305628	.	+	.	ID=gene280;Dbxref=GeneID:4490438;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AHA_0281
NC_008570.1	RefSeq	CDS	305191	305628	.	+	0	ID=cds260;Parent=gene280;Dbxref=Genbank:YP_854808.1,GeneID:4490438;Name=YP_854808.1;Note=identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256;gbkey=CDS;gene=dtd;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=YP_854808.1;transl_table=11
NC_008570.1	RefSeq	gene	305617	306393	.	-	.	ID=gene281;Dbxref=GeneID:4490439;Name=AHA_0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0280
NC_008570.1	RefSeq	CDS	305617	306393	.	-	0	ID=cds261;Parent=gene281;Dbxref=Genbank:YP_854809.1,GeneID:4490439;Name=YP_854809.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854809.1;transl_table=11
NC_008570.1	RefSeq	gene	306468	307376	.	+	.	ID=gene282;Dbxref=GeneID:4490440;Name=AHA_0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0282
NC_008570.1	RefSeq	CDS	306468	307376	.	+	0	ID=cds262;Parent=gene282;Dbxref=Genbank:YP_854810.1,GeneID:4490440;Name=YP_854810.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR02447;gbkey=CDS;product=acetyltransferase;protein_id=YP_854810.1;transl_table=11
NC_008570.1	RefSeq	gene	307439	309505	.	-	.	ID=gene283;Dbxref=GeneID:4490441;Name=AHA_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0283
NC_008570.1	RefSeq	CDS	307439	309505	.	-	0	ID=cds263;Parent=gene283;Dbxref=Genbank:YP_854811.1,GeneID:4490441;Name=YP_854811.1;Note=identified by match to protein family HMM PF05170;gbkey=CDS;product=AsmA family protein;protein_id=YP_854811.1;transl_table=11
NC_008570.1	RefSeq	gene	309648	311720	.	-	.	ID=gene284;Dbxref=GeneID:4490442;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AHA_0284
NC_008570.1	RefSeq	CDS	309648	311720	.	-	0	ID=cds264;Parent=gene284;Dbxref=Genbank:YP_854812.1,GeneID:4490442;Name=YP_854812.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=YP_854812.1;transl_table=11
NC_008570.1	RefSeq	gene	311897	313264	.	-	.	ID=gene285;Dbxref=GeneID:4490443;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AHA_0285
NC_008570.1	RefSeq	CDS	311897	313264	.	-	0	ID=cds265;Parent=gene285;Dbxref=Genbank:YP_854813.1,GeneID:4490443;Name=YP_854813.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=YP_854813.1;transl_table=11
NC_008570.1	RefSeq	gene	313393	314733	.	-	.	ID=gene286;Dbxref=GeneID:4490444;Name=AHA_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0286
NC_008570.1	RefSeq	CDS	313393	314733	.	-	0	ID=cds266;Parent=gene286;Dbxref=Genbank:YP_854815.1,GeneID:4490444;Name=YP_854815.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791;gbkey=CDS;product=low affinity gluconate transporter;protein_id=YP_854815.1;transl_table=11
NC_008570.1	RefSeq	gene	314979	315488	.	+	.	ID=gene287;Dbxref=GeneID:4490445;Name=aroK-1;gbkey=Gene;gene=aroK-1;gene_biotype=protein_coding;locus_tag=AHA_0287
NC_008570.1	RefSeq	CDS	314979	315488	.	+	0	ID=cds267;Parent=gene287;Dbxref=Genbank:YP_854816.1,GeneID:4490445;Name=YP_854816.1;Note=identified by match to protein family HMM PF01202%3B match to protein family HMM TIGR01313;gbkey=CDS;gene=aroK-1;product=shikimate kinase;protein_id=YP_854816.1;transl_table=11
NC_008570.1	RefSeq	gene	315485	317281	.	+	.	ID=gene288;Dbxref=GeneID:4490446;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AHA_0288
NC_008570.1	RefSeq	CDS	315485	317281	.	+	0	ID=cds268;Parent=gene288;Dbxref=Genbank:YP_854817.1,GeneID:4490446;Name=YP_854817.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;gene=edd;product=phosphogluconate dehydratase;protein_id=YP_854817.1;transl_table=11
NC_008570.1	RefSeq	gene	317302	317943	.	+	.	ID=gene289;Dbxref=GeneID:4490447;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=AHA_0289
NC_008570.1	RefSeq	CDS	317302	317943	.	+	0	ID=cds269;Parent=gene289;Dbxref=Genbank:YP_854818.1,GeneID:4490447;Name=YP_854818.1;Note=identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182;gbkey=CDS;gene=eda;product=2-dehydro-3-deoxyphosphogluconate aldolase;protein_id=YP_854818.1;transl_table=11
NC_008570.1	RefSeq	gene	318041	319048	.	-	.	ID=gene290;Dbxref=GeneID:4490448;Name=AHA_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0290
NC_008570.1	RefSeq	CDS	318041	319048	.	-	0	ID=cds270;Parent=gene290;Dbxref=Genbank:YP_854819.1,GeneID:4490448;Name=YP_854819.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=HTH-type transcriptional regulator GntR;protein_id=YP_854819.1;transl_table=11
NC_008570.1	RefSeq	gene	319139	319789	.	+	.	ID=gene291;Dbxref=GeneID:4490449;Name=AHA_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0291
NC_008570.1	RefSeq	CDS	319139	319789	.	+	0	ID=cds271;Parent=gene291;Dbxref=Genbank:YP_854820.1,GeneID:4490449;Name=YP_854820.1;Note=identified by match to protein family HMM PF00805;gbkey=CDS;product=hypothetical protein;protein_id=YP_854820.1;transl_table=11
NC_008570.1	RefSeq	gene	319911	321221	.	-	.	ID=gene292;Dbxref=GeneID:4490450;Name=yibP;gbkey=Gene;gene=yibP;gene_biotype=protein_coding;locus_tag=AHA_0292
NC_008570.1	RefSeq	CDS	319911	321221	.	-	0	ID=cds272;Parent=gene292;Dbxref=Genbank:YP_854821.1,GeneID:4490450;Name=YP_854821.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;gene=yibP;product=M23B family non-peptidase;protein_id=YP_854821.1;transl_table=11
NC_008570.1	RefSeq	gene	321231	322955	.	-	.	ID=gene293;Dbxref=GeneID:4490451;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=AHA_0293
NC_008570.1	RefSeq	CDS	321231	322955	.	-	0	ID=cds273;Parent=gene293;Dbxref=Genbank:YP_854823.1,GeneID:4490451;Name=YP_854823.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;gene=gpmI;product=phosphoglyceromutase;protein_id=YP_854823.1;transl_table=11
NC_008570.1	RefSeq	gene	323086	323517	.	+	.	ID=gene294;Dbxref=GeneID:4490452;Name=AHA_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0294
NC_008570.1	RefSeq	CDS	323086	323517	.	+	0	ID=cds274;Parent=gene294;Dbxref=Genbank:YP_854824.1,GeneID:4490452;Name=YP_854824.1;Note=identified by match to protein family HMM PF00581;gbkey=CDS;product=rhodanese domain-containing protein;protein_id=YP_854824.1;transl_table=11
NC_008570.1	RefSeq	gene	323565	324035	.	+	.	ID=gene295;Dbxref=GeneID:4490453;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AHA_0295
NC_008570.1	RefSeq	CDS	323565	324035	.	+	0	ID=cds275;Parent=gene295;Dbxref=Genbank:YP_854825.1,GeneID:4490453;Name=YP_854825.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;gene=secB;product=preprotein translocase subunit SecB;protein_id=YP_854825.1;transl_table=11
NC_008570.1	RefSeq	gene	324038	325042	.	+	.	ID=gene296;Dbxref=GeneID:4490454;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AHA_0296
NC_008570.1	RefSeq	CDS	324038	325042	.	+	0	ID=cds276;Parent=gene296;Dbxref=Genbank:YP_854826.1,GeneID:4490454;Name=YP_854826.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;gene=gpsA;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_854826.1;transl_table=11
NC_008570.1	RefSeq	gene	325126	325704	.	-	.	ID=gene297;Dbxref=GeneID:4488756;Name=gntY;gbkey=Gene;gene=gntY;gene_biotype=protein_coding;locus_tag=AHA_0297
NC_008570.1	RefSeq	CDS	325126	325704	.	-	0	ID=cds277;Parent=gene297;Dbxref=Genbank:YP_854827.1,GeneID:4488756;Name=YP_854827.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;gene=gntY;product=DNA uptake protein;protein_id=YP_854827.1;transl_table=11
NC_008570.1	RefSeq	gene	325785	326513	.	-	.	ID=gene298;Dbxref=GeneID:4488757;Name=AHA_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0298
NC_008570.1	RefSeq	CDS	325785	326513	.	-	0	ID=cds278;Parent=gene298;Dbxref=Genbank:YP_854828.1,GeneID:4488757;Name=YP_854828.1;gbkey=CDS;product=comF family protein;protein_id=YP_854828.1;transl_table=11
NC_008570.1	RefSeq	gene	326550	327314	.	+	.	ID=gene299;Dbxref=GeneID:4488758;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AHA_0299
NC_008570.1	RefSeq	CDS	326550	327314	.	+	0	ID=cds279;Parent=gene299;Dbxref=Genbank:YP_854829.1,GeneID:4488758;Name=YP_854829.1;Note=identified by match to protein family HMM PF00561%3B match to protein family HMM TIGR01738;gbkey=CDS;gene=bioH;product=pimeloyl-BioC--CoA transferase BioH;protein_id=YP_854829.1;transl_table=11
NC_008570.1	RefSeq	gene	327386	327619	.	+	.	ID=gene300;Dbxref=GeneID:4488759;Name=AHA_0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0300
NC_008570.1	RefSeq	CDS	327386	327619	.	+	0	ID=cds280;Parent=gene300;Dbxref=Genbank:YP_854830.1,GeneID:4488759;Name=YP_854830.1;Note=identified by match to protein family HMM PF06429;gbkey=CDS;product=flagellar hook protein FlgE;protein_id=YP_854830.1;transl_table=11
NC_008570.1	RefSeq	gene	327621	328418	.	+	.	ID=gene301;Dbxref=GeneID:4488760;Name=AHA_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0301
NC_008570.1	RefSeq	CDS	327621	328418	.	+	0	ID=cds281;Parent=gene301;Dbxref=Genbank:YP_854831.1,GeneID:4488760;Name=YP_854831.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854831.1;transl_table=11
NC_008570.1	RefSeq	gene	328514	328792	.	+	.	ID=gene302;Dbxref=GeneID:4488761;Name=AHA_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0302
NC_008570.1	RefSeq	CDS	328514	328792	.	+	0	ID=cds282;Parent=gene302;Dbxref=Genbank:YP_854832.1,GeneID:4488761;Name=YP_854832.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854832.1;transl_table=11
NC_008570.1	RefSeq	gene	328848	331352	.	-	.	ID=gene303;Dbxref=GeneID:4488762;Name=AHA_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0303
NC_008570.1	RefSeq	CDS	328848	331352	.	-	0	ID=cds283;Parent=gene303;Dbxref=Genbank:YP_854833.1,GeneID:4488762;Name=YP_854833.1;Note=identified by match to protein family HMM PF00575;gbkey=CDS;product=S1 RNA-binding domain-containing protein;protein_id=YP_854833.1;transl_table=11
NC_008570.1	RefSeq	gene	331424	331897	.	-	.	ID=gene304;Dbxref=GeneID:4488763;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AHA_0304
NC_008570.1	RefSeq	CDS	331424	331897	.	-	0	ID=cds284;Parent=gene304;Dbxref=Genbank:YP_854834.1,GeneID:4488763;Name=YP_854834.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greB;product=transcription elongation factor GreB;protein_id=YP_854834.1;transl_table=11
NC_008570.1	RefSeq	gene	332134	332853	.	+	.	ID=gene305;Dbxref=GeneID:4488764;Name=AHA_0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0305
NC_008570.1	RefSeq	CDS	332134	332853	.	+	0	ID=cds285;Parent=gene305;Dbxref=Genbank:YP_854835.1,GeneID:4488764;Name=YP_854835.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulator OmpR;protein_id=YP_854835.1;transl_table=11
NC_008570.1	RefSeq	gene	332859	334160	.	+	.	ID=gene306;Dbxref=GeneID:4488765;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=AHA_0306
NC_008570.1	RefSeq	CDS	332859	334160	.	+	0	ID=cds286;Parent=gene306;Dbxref=Genbank:YP_854836.1,GeneID:4488765;Name=YP_854836.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=osmolarity sensor protein;protein_id=YP_854836.1;transl_table=11
NC_008570.1	RefSeq	gene	334196	335110	.	-	.	ID=gene307;Dbxref=GeneID:4488766;Name=AHA_0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0307
NC_008570.1	RefSeq	CDS	334196	335110	.	-	0	ID=cds287;Parent=gene307;Dbxref=Genbank:YP_854837.1,GeneID:4488766;Name=YP_854837.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_854837.1;transl_table=11
NC_008570.1	RefSeq	gene	335374	335778	.	+	.	ID=gene308;Dbxref=GeneID:4488767;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AHA_0308
NC_008570.1	RefSeq	CDS	335374	335778	.	+	0	ID=cds288;Parent=gene308;Dbxref=Genbank:YP_854838.1,GeneID:4488767;Name=YP_854838.1;Note=identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=YP_854838.1;transl_table=11
NC_008570.1	RefSeq	gene	335801	336433	.	+	.	ID=gene309;Dbxref=GeneID:4488768;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AHA_0309
NC_008570.1	RefSeq	CDS	335801	336433	.	+	0	ID=cds289;Parent=gene309;Dbxref=Genbank:YP_854839.1,GeneID:4488768;Name=YP_854839.1;Note=binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=YP_854839.1;transl_table=11
NC_008570.1	RefSeq	gene	336451	337056	.	+	.	ID=gene310;Dbxref=GeneID:4488769;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AHA_0310
NC_008570.1	RefSeq	CDS	336451	337056	.	+	0	ID=cds290;Parent=gene310;Dbxref=Genbank:YP_854840.1,GeneID:4488769;Name=YP_854840.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=YP_854840.1;transl_table=11
NC_008570.1	RefSeq	gene	337053	337355	.	+	.	ID=gene311;Dbxref=GeneID:4488770;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AHA_0311
NC_008570.1	RefSeq	CDS	337053	337355	.	+	0	ID=cds291;Parent=gene311;Dbxref=Genbank:YP_854841.1,GeneID:4488770;Name=YP_854841.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=YP_854841.1;transl_table=11
NC_008570.1	RefSeq	gene	337371	338192	.	+	.	ID=gene312;Dbxref=GeneID:4488771;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AHA_0312
NC_008570.1	RefSeq	CDS	337371	338192	.	+	0	ID=cds292;Parent=gene312;Dbxref=Genbank:YP_854842.1,GeneID:4488771;Name=YP_854842.1;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=YP_854842.1;transl_table=11
NC_008570.1	RefSeq	gene	338215	338493	.	+	.	ID=gene313;Dbxref=GeneID:4488772;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AHA_0313
NC_008570.1	RefSeq	CDS	338215	338493	.	+	0	ID=cds293;Parent=gene313;Dbxref=Genbank:YP_854843.1,GeneID:4488772;Name=YP_854843.1;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=YP_854843.1;transl_table=11
NC_008570.1	RefSeq	gene	338504	338848	.	+	.	ID=gene314;Dbxref=GeneID:4488773;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AHA_0314
NC_008570.1	RefSeq	CDS	338504	338848	.	+	0	ID=cds294;Parent=gene314;Dbxref=Genbank:YP_854845.1,GeneID:4488773;Name=YP_854845.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=YP_854845.1;transl_table=11
NC_008570.1	RefSeq	gene	338852	339565	.	+	.	ID=gene315;Dbxref=GeneID:4488774;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AHA_0315
NC_008570.1	RefSeq	CDS	338852	339565	.	+	0	ID=cds295;Parent=gene315;Dbxref=Genbank:YP_854847.1,GeneID:4488774;Name=YP_854847.1;Note=identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=YP_854847.1;transl_table=11
NC_008570.1	RefSeq	gene	339579	339992	.	+	.	ID=gene316;Dbxref=GeneID:4488775;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AHA_0316
NC_008570.1	RefSeq	CDS	339579	339992	.	+	0	ID=cds296;Parent=gene316;Dbxref=Genbank:YP_854848.1,GeneID:4488775;Name=YP_854848.1;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=YP_854848.1;transl_table=11
NC_008570.1	RefSeq	gene	339989	340183	.	+	.	ID=gene317;Dbxref=GeneID:4489522;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AHA_0317
NC_008570.1	RefSeq	CDS	339989	340183	.	+	0	ID=cds297;Parent=gene317;Dbxref=Genbank:YP_854850.1,GeneID:4489522;Name=YP_854850.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=YP_854850.1;transl_table=11
NC_008570.1	RefSeq	gene	340183	340431	.	+	.	ID=gene318;Dbxref=GeneID:4489523;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AHA_0318
NC_008570.1	RefSeq	CDS	340183	340431	.	+	0	ID=cds298;Parent=gene318;Dbxref=Genbank:YP_854852.1,GeneID:4489523;Name=YP_854852.1;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=YP_854852.1;transl_table=11
NC_008570.1	RefSeq	gene	340579	340947	.	+	.	ID=gene319;Dbxref=GeneID:4489524;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AHA_0319
NC_008570.1	RefSeq	CDS	340579	340947	.	+	0	ID=cds299;Parent=gene319;Dbxref=Genbank:YP_854853.1,GeneID:4489524;Name=YP_854853.1;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=YP_854853.1;transl_table=11
NC_008570.1	RefSeq	gene	340959	341276	.	+	.	ID=gene320;Dbxref=GeneID:4489525;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AHA_0320
NC_008570.1	RefSeq	CDS	340959	341276	.	+	0	ID=cds300;Parent=gene320;Dbxref=Genbank:YP_854854.1,GeneID:4489525;Name=YP_854854.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=YP_854854.1;transl_table=11
NC_008570.1	RefSeq	gene	341290	341829	.	+	.	ID=gene321;Dbxref=GeneID:4489526;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AHA_0321
NC_008570.1	RefSeq	CDS	341290	341829	.	+	0	ID=cds301;Parent=gene321;Dbxref=Genbank:YP_854855.1,GeneID:4489526;Name=YP_854855.1;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=YP_854855.1;transl_table=11
NC_008570.1	RefSeq	gene	341840	342145	.	+	.	ID=gene322;Dbxref=GeneID:4489527;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AHA_0322
NC_008570.1	RefSeq	CDS	341840	342145	.	+	0	ID=cds302;Parent=gene322;Dbxref=Genbank:YP_854856.1,GeneID:4489527;Name=YP_854856.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=YP_854856.1;transl_table=11
NC_008570.1	RefSeq	gene	342167	342559	.	+	.	ID=gene323;Dbxref=GeneID:4489528;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AHA_0323
NC_008570.1	RefSeq	CDS	342167	342559	.	+	0	ID=cds303;Parent=gene323;Dbxref=Genbank:YP_854857.1,GeneID:4489528;Name=YP_854857.1;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=YP_854857.1;transl_table=11
NC_008570.1	RefSeq	gene	342573	343106	.	+	.	ID=gene324;Dbxref=GeneID:4489529;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AHA_0324
NC_008570.1	RefSeq	CDS	342573	343106	.	+	0	ID=cds304;Parent=gene324;Dbxref=Genbank:YP_854858.1,GeneID:4489529;Name=YP_854858.1;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=YP_854858.1;transl_table=11
NC_008570.1	RefSeq	gene	343116	343469	.	+	.	ID=gene325;Dbxref=GeneID:4489530;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AHA_0325
NC_008570.1	RefSeq	CDS	343116	343469	.	+	0	ID=cds305;Parent=gene325;Dbxref=Genbank:YP_854859.1,GeneID:4489530;Name=YP_854859.1;Note=binds 5S rRNA along with protein L5 and L25;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=YP_854859.1;transl_table=11
NC_008570.1	RefSeq	gene	343484	343984	.	+	.	ID=gene326;Dbxref=GeneID:4489531;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AHA_0326
NC_008570.1	RefSeq	CDS	343484	343984	.	+	0	ID=cds306;Parent=gene326;Dbxref=Genbank:YP_854860.1,GeneID:4489531;Name=YP_854860.1;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=YP_854860.1;transl_table=11
NC_008570.1	RefSeq	gene	343991	344170	.	+	.	ID=gene327;Dbxref=GeneID:4489532;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AHA_0327
NC_008570.1	RefSeq	CDS	343991	344170	.	+	0	ID=cds307;Parent=gene327;Dbxref=Genbank:YP_854861.1,GeneID:4489532;Name=YP_854861.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=YP_854861.1;transl_table=11
NC_008570.1	RefSeq	gene	344173	344610	.	+	.	ID=gene328;Dbxref=GeneID:4489533;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AHA_0328
NC_008570.1	RefSeq	CDS	344173	344610	.	+	0	ID=cds308;Parent=gene328;Dbxref=Genbank:YP_854862.1,GeneID:4489533;Name=YP_854862.1;Note=late assembly protein;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=YP_854862.1;transl_table=11
NC_008570.1	RefSeq	gene	344619	345947	.	+	.	ID=gene329;Dbxref=GeneID:4489534;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AHA_0329
NC_008570.1	RefSeq	CDS	344619	345947	.	+	0	ID=cds309;Parent=gene329;Dbxref=Genbank:YP_854863.1,GeneID:4489534;Name=YP_854863.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=YP_854863.1;transl_table=11
NC_008570.1	RefSeq	gene	346228	346584	.	+	.	ID=gene330;Dbxref=GeneID:4489535;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AHA_0330
NC_008570.1	RefSeq	CDS	346228	346584	.	+	0	ID=cds310;Parent=gene330;Dbxref=Genbank:YP_854864.1,GeneID:4489535;Name=YP_854864.1;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=YP_854864.1;transl_table=11
NC_008570.1	RefSeq	gene	346599	346988	.	+	.	ID=gene331;Dbxref=GeneID:4489536;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AHA_0331
NC_008570.1	RefSeq	CDS	346599	346988	.	+	0	ID=cds311;Parent=gene331;Dbxref=Genbank:YP_854865.1,GeneID:4489536;Name=YP_854865.1;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=YP_854865.1;transl_table=11
NC_008570.1	RefSeq	gene	347028	347648	.	+	.	ID=gene332;Dbxref=GeneID:4489537;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AHA_0332
NC_008570.1	RefSeq	CDS	347028	347648	.	+	0	ID=cds312;Parent=gene332;Dbxref=Genbank:YP_854866.1,GeneID:4489537;Name=YP_854866.1;Note=identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=YP_854866.1;transl_table=11
NC_008570.1	RefSeq	gene	347674	348663	.	+	.	ID=gene333;Dbxref=GeneID:4489538;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AHA_0333
NC_008570.1	RefSeq	CDS	347674	348663	.	+	0	ID=cds313;Parent=gene333;Dbxref=Genbank:YP_854867.1,GeneID:4489538;Name=YP_854867.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_854867.1;transl_table=11
NC_008570.1	RefSeq	gene	348707	349090	.	+	.	ID=gene334;Dbxref=GeneID:4489539;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AHA_0334
NC_008570.1	RefSeq	CDS	348707	349090	.	+	0	ID=cds314;Parent=gene334;Dbxref=Genbank:YP_854868.1,GeneID:4489539;Name=YP_854868.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=YP_854868.1;transl_table=11
NC_008570.1	RefSeq	gene	349946	351495	.	+	.	ID=gene335;Dbxref=GeneID:4489540;Name=rrsD;gbkey=Gene;gene=rrsD;gene_biotype=rRNA;locus_tag=AHA_0335
NC_008570.1	RefSeq	rRNA	349946	351495	.	+	.	ID=rna20;Parent=gene335;Dbxref=GeneID:4489540;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	349946	351495	.	+	.	ID=id21;Parent=rna20;Dbxref=GeneID:4489540;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	351690	351765	.	+	.	ID=gene336;Dbxref=GeneID:4489464;Name=AHA_0336;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0336
NC_008570.1	RefSeq	tRNA	351690	351765	.	+	.	ID=rna21;Parent=gene336;Dbxref=GeneID:4489464;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	351690	351765	.	+	.	ID=id22;Parent=rna21;Dbxref=GeneID:4489464;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	352002	354890	.	+	.	ID=gene337;Dbxref=GeneID:4489465;Name=rrlD;gbkey=Gene;gene=rrlD;gene_biotype=rRNA;locus_tag=AHA_0337
NC_008570.1	RefSeq	rRNA	352002	354890	.	+	.	ID=rna22;Parent=gene337;Dbxref=GeneID:4489465;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	352002	354890	.	+	.	ID=id23;Parent=rna22;Dbxref=GeneID:4489465;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	354966	355085	.	+	.	ID=gene338;Dbxref=GeneID:4489466;Name=rrfD;gbkey=Gene;gene=rrfD;gene_biotype=rRNA;locus_tag=AHA_0338
NC_008570.1	RefSeq	rRNA	354966	355085	.	+	.	ID=rna23;Parent=gene338;Dbxref=GeneID:4489466;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	354966	355085	.	+	.	ID=id24;Parent=rna23;Dbxref=GeneID:4489466;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	355180	355256	.	+	.	ID=gene339;Dbxref=GeneID:4489467;Name=AHA_0339;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0339
NC_008570.1	RefSeq	tRNA	355180	355256	.	+	.	ID=rna24;Parent=gene339;Dbxref=GeneID:4489467;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	exon	355180	355256	.	+	.	ID=id25;Parent=rna24;Dbxref=GeneID:4489467;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	gene	356544	357545	.	-	.	ID=gene340;Dbxref=GeneID:4489468;Name=AHA_0340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0340
NC_008570.1	RefSeq	CDS	356544	357545	.	-	0	ID=cds315;Parent=gene340;Dbxref=Genbank:YP_854869.1,GeneID:4489468;Name=YP_854869.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854869.1;transl_table=11
NC_008570.1	RefSeq	gene	357834	358220	.	-	.	ID=gene341;Dbxref=GeneID:4489469;Name=AHA_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0341
NC_008570.1	RefSeq	CDS	357834	358220	.	-	0	ID=cds316;Parent=gene341;Dbxref=Genbank:YP_854870.1,GeneID:4489469;Name=YP_854870.1;Note=identified by match to protein family HMM PF04247;gbkey=CDS;product=SirB family protein;protein_id=YP_854870.1;transl_table=11
NC_008570.1	RefSeq	gene	358217	360073	.	-	.	ID=gene342;Dbxref=GeneID:4489470;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AHA_0342
NC_008570.1	RefSeq	CDS	358217	360073	.	-	0	ID=cds317;Parent=gene342;Dbxref=Genbank:YP_854871.1,GeneID:4489470;Name=YP_854871.1;Note=identified by similarity to SP:P45522%3B match to protein family HMM PF00999%3B match to protein family HMM PF02254%3B match to protein family HMM TIGR00932;gbkey=CDS;gene=kefB;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=YP_854871.1;transl_table=11
NC_008570.1	RefSeq	gene	360144	360824	.	-	.	ID=gene343;Dbxref=GeneID:4489471;Name=AHA_0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0343
NC_008570.1	RefSeq	CDS	360144	360824	.	-	0	ID=cds318;Parent=gene343;Dbxref=Genbank:YP_854872.1,GeneID:4489471;Name=YP_854872.1;Note=identified by match to protein family HMM PF02525;gbkey=CDS;product=modulator of glutathione-dependent potassium efflux system;protein_id=YP_854872.1;transl_table=11
NC_008570.1	RefSeq	gene	360821	361717	.	-	.	ID=gene344;Dbxref=GeneID:4489472;Name=AHA_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0344
NC_008570.1	RefSeq	CDS	360821	361717	.	-	0	ID=cds319;Parent=gene344;Dbxref=Genbank:YP_854873.1,GeneID:4489472;Name=YP_854873.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_854873.1;transl_table=11
NC_008570.1	RefSeq	gene	361687	362529	.	+	.	ID=gene345;Dbxref=GeneID:4489473;Name=AHA_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0345
NC_008570.1	RefSeq	CDS	361687	362529	.	+	0	ID=cds320;Parent=gene345;Dbxref=Genbank:YP_854874.1,GeneID:4489473;Name=YP_854874.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370;gbkey=CDS;product=clavaldehyde dehydrogenase;protein_id=YP_854874.1;transl_table=11
NC_008570.1	RefSeq	gene	362617	362940	.	+	.	ID=gene346;Dbxref=GeneID:4489474;Name=AHA_0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0346
NC_008570.1	RefSeq	CDS	362617	362940	.	+	0	ID=cds321;Parent=gene346;Dbxref=Genbank:YP_854875.1,GeneID:4489474;Name=YP_854875.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854875.1;transl_table=11
NC_008570.1	RefSeq	gene	362990	363421	.	+	.	ID=gene347;Dbxref=GeneID:4489475;Name=AHA_0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0347
NC_008570.1	RefSeq	CDS	362990	363421	.	+	0	ID=cds322;Parent=gene347;Dbxref=Genbank:YP_854876.1,GeneID:4489475;Name=YP_854876.1;Note=identified by match to protein family HMM PF04214;gbkey=CDS;product=hypothetical protein;protein_id=YP_854876.1;transl_table=11
NC_008570.1	RefSeq	gene	363580	365799	.	+	.	ID=gene348;Dbxref=GeneID:4489476;Name=AHA_0348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0348
NC_008570.1	RefSeq	CDS	363580	365799	.	+	0	ID=cds323;Parent=gene348;Dbxref=Genbank:YP_854877.1,GeneID:4489476;Name=YP_854877.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF02897;gbkey=CDS;product=protease II;protein_id=YP_854877.1;transl_table=11
NC_008570.1	RefSeq	gene	366071	367186	.	+	.	ID=gene349;Dbxref=GeneID:4489477;Name=AHA_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0349
NC_008570.1	RefSeq	CDS	366071	367186	.	+	0	ID=cds324;Parent=gene349;Dbxref=Genbank:YP_854878.1,GeneID:4489477;Name=YP_854878.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;product=TRAP transporter solute receptor TAXI family protein;protein_id=YP_854878.1;transl_table=11
NC_008570.1	RefSeq	gene	367289	369841	.	+	.	ID=gene350;Dbxref=GeneID:4489478;Name=AHA_0350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0350
NC_008570.1	RefSeq	CDS	367289	369841	.	+	0	ID=cds325;Parent=gene350;Dbxref=Genbank:YP_854879.1,GeneID:4489478;Name=YP_854879.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=YP_854879.1;transl_table=11
NC_008570.1	RefSeq	gene	369900	370010	.	-	.	ID=gene351;Dbxref=GeneID:4489479;Name=AHA_0351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0351
NC_008570.1	RefSeq	CDS	369900	370010	.	-	0	ID=cds326;Parent=gene351;Dbxref=Genbank:YP_854880.1,GeneID:4489479;Name=YP_854880.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854880.1;transl_table=11
NC_008570.1	RefSeq	gene	370032	370184	.	-	.	ID=gene352;Dbxref=GeneID:4489480;Name=AHA_0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0352
NC_008570.1	RefSeq	CDS	370032	370184	.	-	0	ID=cds327;Parent=gene352;Dbxref=Genbank:YP_854881.1,GeneID:4489480;Name=YP_854881.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854881.1;transl_table=11
NC_008570.1	RefSeq	gene	370361	370987	.	+	.	ID=gene353;Dbxref=GeneID:4489481;Name=AHA_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0353
NC_008570.1	RefSeq	CDS	370361	370987	.	+	0	ID=cds328;Parent=gene353;Dbxref=Genbank:YP_854882.1,GeneID:4489481;Name=YP_854882.1;Note=identified by match to protein family HMM PF07947;gbkey=CDS;product=hypothetical protein;protein_id=YP_854882.1;transl_table=11
NC_008570.1	RefSeq	gene	371078	372631	.	-	.	ID=gene354;Dbxref=GeneID:4489482;Name=AHA_0354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0354
NC_008570.1	RefSeq	CDS	371078	372631	.	-	0	ID=cds329;Parent=gene354;Dbxref=Genbank:YP_854883.1,GeneID:4489482;Name=YP_854883.1;Note=identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711;gbkey=CDS;product=multidrug resistance protein B;protein_id=YP_854883.1;transl_table=11
NC_008570.1	RefSeq	gene	372631	373683	.	-	.	ID=gene355;Dbxref=GeneID:4489483;Name=AHA_0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0355
NC_008570.1	RefSeq	CDS	372631	373683	.	-	0	ID=cds330;Parent=gene355;Dbxref=Genbank:YP_854884.1,GeneID:4489483;Name=YP_854884.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_854884.1;transl_table=11
NC_008570.1	RefSeq	gene	373780	374682	.	+	.	ID=gene356;Dbxref=GeneID:4490802;Name=AHA_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0356
NC_008570.1	RefSeq	CDS	373780	374682	.	+	0	ID=cds331;Parent=gene356;Dbxref=Genbank:YP_854885.1,GeneID:4490802;Name=YP_854885.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_854885.1;transl_table=11
NC_008570.1	RefSeq	gene	374739	375053	.	+	.	ID=gene357;Dbxref=GeneID:4490803;Name=AHA_0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0357
NC_008570.1	RefSeq	CDS	374739	375053	.	+	0	ID=cds332;Parent=gene357;Dbxref=Genbank:YP_854886.1,GeneID:4490803;Name=YP_854886.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854886.1;transl_table=11
NC_008570.1	RefSeq	gene	375068	376387	.	-	.	ID=gene358;Dbxref=GeneID:4490804;Name=AHA_0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0358
NC_008570.1	RefSeq	CDS	375068	376387	.	-	0	ID=cds333;Parent=gene358;Dbxref=Genbank:YP_854887.1,GeneID:4490804;Name=YP_854887.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;product=proton/glutamate symporter;protein_id=YP_854887.1;transl_table=11
NC_008570.1	RefSeq	gene	376422	376805	.	+	.	ID=gene359;Dbxref=GeneID:4490805;Name=AHA_0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0359
NC_008570.1	RefSeq	CDS	376422	376805	.	+	0	ID=cds334;Parent=gene359;Dbxref=Genbank:YP_854888.1,GeneID:4490805;Name=YP_854888.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854888.1;transl_table=11
NC_008570.1	RefSeq	gene	376908	377507	.	+	.	ID=gene360;Dbxref=GeneID:4490806;Name=AHA_0360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0360
NC_008570.1	RefSeq	CDS	376908	377507	.	+	0	ID=cds335;Parent=gene360;Dbxref=Genbank:YP_854889.1,GeneID:4490806;Name=YP_854889.1;Note=identified by match to protein family HMM PF01914%3B match to protein family HMM TIGR00427;gbkey=CDS;product=hypothetical protein;protein_id=YP_854889.1;transl_table=11
NC_008570.1	RefSeq	gene	377612	378580	.	-	.	ID=gene361;Dbxref=GeneID:4490807;Name=AHA_0361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0361
NC_008570.1	RefSeq	CDS	377612	378580	.	-	0	ID=cds336;Parent=gene361;Dbxref=Genbank:YP_854890.1,GeneID:4490807;Name=YP_854890.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YidZ;protein_id=YP_854890.1;transl_table=11
NC_008570.1	RefSeq	gene	378854	379015	.	+	.	ID=gene362;Dbxref=GeneID:4490808;Name=AHA_0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0362
NC_008570.1	RefSeq	CDS	378854	379015	.	+	0	ID=cds337;Parent=gene362;Dbxref=Genbank:YP_854891.1,GeneID:4490808;Name=YP_854891.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;product=hypothetical protein;protein_id=YP_854891.1;transl_table=11
NC_008570.1	RefSeq	gene	379030	379332	.	+	.	ID=gene363;Dbxref=GeneID:4490809;Name=AHA_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0363
NC_008570.1	RefSeq	CDS	379030	379332	.	+	0	ID=cds338;Parent=gene363;Dbxref=Genbank:YP_854892.1,GeneID:4490809;Name=YP_854892.1;Note=identified by match to protein family HMM PF04175;gbkey=CDS;product=hypothetical protein;protein_id=YP_854892.1;transl_table=11
NC_008570.1	RefSeq	gene	379381	380982	.	+	.	ID=gene364;Dbxref=GeneID:4490810;Name=AHA_0364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0364
NC_008570.1	RefSeq	CDS	379381	380982	.	+	0	ID=cds339;Parent=gene364;Dbxref=Genbank:YP_854893.1,GeneID:4490810;Name=YP_854893.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=amino-acid ABC transporter binding protein;protein_id=YP_854893.1;transl_table=11
NC_008570.1	RefSeq	gene	381214	382467	.	+	.	ID=gene365;Dbxref=GeneID:4490811;Name=AHA_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0365
NC_008570.1	RefSeq	CDS	381214	382467	.	+	0	ID=cds340;Parent=gene365;Dbxref=Genbank:YP_854894.1,GeneID:4490811;Name=YP_854894.1;Note=identified by match to protein family HMM PF00614;gbkey=CDS;product=phospholipase D;protein_id=YP_854894.1;transl_table=11
NC_008570.1	RefSeq	gene	382947	384065	.	-	.	ID=gene366;Dbxref=GeneID:4490812;Name=AHA_0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0366
NC_008570.1	RefSeq	CDS	382947	384065	.	-	0	ID=cds341;Parent=gene366;Dbxref=Genbank:YP_854895.1,GeneID:4490812;Name=YP_854895.1;Note=identified by match to protein family HMM PF00487;gbkey=CDS;product=fatty acid desaturase family protein;protein_id=YP_854895.1;transl_table=11
NC_008570.1	RefSeq	gene	384214	384834	.	+	.	ID=gene367;Dbxref=GeneID:4490813;Name=AHA_0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0367
NC_008570.1	RefSeq	CDS	384214	384834	.	+	0	ID=cds342;Parent=gene367;Dbxref=Genbank:YP_854896.1,GeneID:4490813;Name=YP_854896.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=DNA-binding transcriptional repressor FabR;protein_id=YP_854896.1;transl_table=11
NC_008570.1	RefSeq	gene	384843	385220	.	+	.	ID=gene368;Dbxref=GeneID:4490814;Name=AHA_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0368
NC_008570.1	RefSeq	CDS	384843	385220	.	+	0	ID=cds343;Parent=gene368;Dbxref=Genbank:YP_854897.1,GeneID:4490814;Name=YP_854897.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854897.1;transl_table=11
NC_008570.1	RefSeq	gene	385259	385570	.	-	.	ID=gene369;Dbxref=GeneID:4490815;Name=AHA_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0369
NC_008570.1	RefSeq	CDS	385259	385570	.	-	0	ID=cds344;Parent=gene369;Dbxref=Genbank:YP_854898.1,GeneID:4490815;Name=YP_854898.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854898.1;transl_table=11
NC_008570.1	RefSeq	gene	385681	386310	.	-	.	ID=gene370;Dbxref=GeneID:4490816;Name=AHA_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0370
NC_008570.1	RefSeq	CDS	385681	386310	.	-	0	ID=cds345;Parent=gene370;Dbxref=Genbank:YP_854899.1,GeneID:4490816;Name=YP_854899.1;Note=identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095;gbkey=CDS;product=methyltransferase;protein_id=YP_854899.1;transl_table=11
NC_008570.1	RefSeq	gene	386421	388322	.	+	.	ID=gene371;Dbxref=GeneID:4490817;Name=AHA_0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0371
NC_008570.1	RefSeq	CDS	386421	388322	.	+	0	ID=cds346;Parent=gene371;Dbxref=Genbank:YP_854900.1,GeneID:4490817;Name=YP_854900.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064;gbkey=CDS;product=cell division protein FtsY;protein_id=YP_854900.1;transl_table=11
NC_008570.1	RefSeq	gene	388413	389081	.	+	.	ID=gene372;Dbxref=GeneID:4490818;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AHA_0372
NC_008570.1	RefSeq	CDS	388413	389081	.	+	0	ID=cds347;Parent=gene372;Dbxref=Genbank:YP_854901.1,GeneID:4490818;Name=YP_854901.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673;gbkey=CDS;gene=ftsE;product=cell division ATP-binding protein FtsE;protein_id=YP_854901.1;transl_table=11
NC_008570.1	RefSeq	gene	389081	390034	.	+	.	ID=gene373;Dbxref=GeneID:4490819;Name=AHA_0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0373
NC_008570.1	RefSeq	CDS	389081	390034	.	+	0	ID=cds348;Parent=gene373;Dbxref=Genbank:YP_854902.1,GeneID:4490819;Name=YP_854902.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=cell division membrane protein;protein_id=YP_854902.1;transl_table=11
NC_008570.1	RefSeq	gene	390490	391344	.	+	.	ID=gene374;Dbxref=GeneID:4490820;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AHA_0374
NC_008570.1	RefSeq	CDS	390490	391344	.	+	0	ID=cds349;Parent=gene374;Dbxref=Genbank:YP_854903.1,GeneID:4490820;Name=YP_854903.1;Note=identified by similarity to SP:P11539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02392%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoH;product=alternative sigma factor RpoH;protein_id=YP_854903.1;transl_table=11
NC_008570.1	RefSeq	gene	391471	392130	.	+	.	ID=gene375;Dbxref=GeneID:4486959;Name=AHA_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0375
NC_008570.1	RefSeq	CDS	391471	392130	.	+	0	ID=cds350;Parent=gene375;Dbxref=Genbank:YP_854904.1,GeneID:4486959;Name=YP_854904.1;Note=identified by match to protein family HMM PF00484;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_854904.1;transl_table=11
NC_008570.1	RefSeq	gene	392142	392846	.	+	.	ID=gene376;Dbxref=GeneID:4486960;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=AHA_0376
NC_008570.1	RefSeq	CDS	392142	392846	.	+	0	ID=cds351;Parent=gene376;Dbxref=Genbank:YP_854905.1,GeneID:4486960;Name=YP_854905.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702%3B match to protein family HMM TIGR02018;gbkey=CDS;gene=hutC;product=histidine utilization repressor;protein_id=YP_854905.1;transl_table=11
NC_008570.1	RefSeq	gene	392933	394237	.	+	.	ID=gene377;Dbxref=GeneID:4486961;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=AHA_0377
NC_008570.1	RefSeq	CDS	392933	394237	.	+	0	ID=cds352;Parent=gene377;Dbxref=Genbank:YP_854906.1,GeneID:4486961;Name=YP_854906.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;gene=hutI;product=imidazolonepropionase;protein_id=YP_854906.1;transl_table=11
NC_008570.1	RefSeq	gene	394230	395174	.	+	.	ID=gene378;Dbxref=GeneID:4486962;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=AHA_0378
NC_008570.1	RefSeq	CDS	394230	395174	.	+	0	ID=cds353;Parent=gene378;Dbxref=Genbank:YP_854907.1,GeneID:4486962;Name=YP_854907.1;Note=catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate;gbkey=CDS;gene=hutG;product=formimidoylglutamase;protein_id=YP_854907.1;transl_table=11
NC_008570.1	RefSeq	gene	395229	396938	.	+	.	ID=gene379;Dbxref=GeneID:4486963;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=AHA_0379
NC_008570.1	RefSeq	CDS	395229	396938	.	+	0	ID=cds354;Parent=gene379;Dbxref=Genbank:YP_854908.1,GeneID:4486963;Name=YP_854908.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;gene=hutU;product=urocanate hydratase;protein_id=YP_854908.1;transl_table=11
NC_008570.1	RefSeq	gene	396943	398475	.	+	.	ID=gene380;Dbxref=GeneID:4486964;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=AHA_0380
NC_008570.1	RefSeq	CDS	396943	398475	.	+	0	ID=cds355;Parent=gene380;Dbxref=Genbank:YP_854909.1,GeneID:4486964;Name=YP_854909.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;gene=hutH;product=histidine ammonia-lyase;protein_id=YP_854909.1;transl_table=11
NC_008570.1	RefSeq	gene	398545	399642	.	-	.	ID=gene381;Dbxref=GeneID:4486965;Name=AHA_0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0381
NC_008570.1	RefSeq	CDS	398545	399642	.	-	0	ID=cds356;Parent=gene381;Dbxref=Genbank:YP_854910.1,GeneID:4486965;Name=YP_854910.1;Note=identified by match to protein family HMM PF01699;gbkey=CDS;product=calcium/proton antiporter;protein_id=YP_854910.1;transl_table=11
NC_008570.1	RefSeq	gene	399804	401171	.	-	.	ID=gene382;Dbxref=GeneID:4486966;Name=AHA_0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0382
NC_008570.1	RefSeq	CDS	399804	401171	.	-	0	ID=cds357;Parent=gene382;Dbxref=Genbank:YP_854911.1,GeneID:4486966;Name=YP_854911.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_854911.1;transl_table=11
NC_008570.1	RefSeq	gene	401850	403808	.	+	.	ID=gene383;Dbxref=GeneID:4486967;Name=AHA_0383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0383
NC_008570.1	RefSeq	CDS	401850	403808	.	+	0	ID=cds358;Parent=gene383;Dbxref=Genbank:YP_854912.1,GeneID:4486967;Name=YP_854912.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=regulatory protein CsrD;protein_id=YP_854912.1;transl_table=11
NC_008570.1	RefSeq	gene	403909	404856	.	-	.	ID=gene384;Dbxref=GeneID:4486968;Name=AHA_0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0384
NC_008570.1	RefSeq	CDS	403909	404856	.	-	0	ID=cds359;Parent=gene384;Dbxref=Genbank:YP_854913.1,GeneID:4486968;Name=YP_854913.1;Note=identified by match to protein family HMM PF00291;gbkey=CDS;product=ACC deaminase/D-cysteine desulfhydrase family protein;protein_id=YP_854913.1;transl_table=11
NC_008570.1	RefSeq	gene	404926	405789	.	+	.	ID=gene385;Dbxref=GeneID:4486969;Name=AHA_0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0385
NC_008570.1	RefSeq	CDS	404926	405789	.	+	0	ID=cds360;Parent=gene385;Dbxref=Genbank:YP_854914.1,GeneID:4486969;Name=YP_854914.1;gbkey=CDS;product=MSHA biogenesis protein MshI;protein_id=YP_854914.1;transl_table=11
NC_008570.1	RefSeq	gene	405786	405890	.	+	.	ID=gene386;Dbxref=GeneID:4486970;Name=AHA_0386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0386
NC_008570.1	RefSeq	CDS	405786	405890	.	+	0	ID=cds361;Parent=gene386;Dbxref=Genbank:YP_854915.1,GeneID:4486970;Name=YP_854915.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854915.1;transl_table=11
NC_008570.1	RefSeq	gene	405890	406483	.	+	.	ID=gene387;Dbxref=GeneID:4486971;Name=AHA_0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0387
NC_008570.1	RefSeq	CDS	405890	406483	.	+	0	ID=cds362;Parent=gene387;Dbxref=Genbank:YP_854916.1,GeneID:4486971;Name=YP_854916.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854916.1;transl_table=11
NC_008570.1	RefSeq	gene	406483	407130	.	+	.	ID=gene388;Dbxref=GeneID:4486972;Name=AHA_0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0388
NC_008570.1	RefSeq	CDS	406483	407130	.	+	0	ID=cds363;Parent=gene388;Dbxref=Genbank:YP_854917.1,GeneID:4486972;Name=YP_854917.1;gbkey=CDS;product=msha biogenesis protein mshj;protein_id=YP_854917.1;transl_table=11
NC_008570.1	RefSeq	gene	407520	409193	.	+	.	ID=gene389;Dbxref=GeneID:4486973;Name=AHA_0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0389
NC_008570.1	RefSeq	CDS	407520	409193	.	+	0	ID=cds364;Parent=gene389;Dbxref=Genbank:YP_854918.1,GeneID:4486973;Name=YP_854918.1;Note=identified by match to protein family HMM PF00263%3B match to protein family HMM PF07655%3B match to protein family HMM TIGR02519;gbkey=CDS;product=msha biogenesis protein mshl;protein_id=YP_854918.1;transl_table=11
NC_008570.1	RefSeq	gene	409271	410161	.	+	.	ID=gene390;Dbxref=GeneID:4486974;Name=AHA_0390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0390
NC_008570.1	RefSeq	CDS	409271	410161	.	+	0	ID=cds365;Parent=gene390;Dbxref=Genbank:YP_854919.1,GeneID:4486974;Name=YP_854919.1;gbkey=CDS;product=general secretion pathway protein A;protein_id=YP_854919.1;transl_table=11
NC_008570.1	RefSeq	gene	410257	411255	.	+	.	ID=gene391;Dbxref=GeneID:4486975;Name=AHA_0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0391
NC_008570.1	RefSeq	CDS	410257	411255	.	+	0	ID=cds366;Parent=gene391;Dbxref=Genbank:YP_854920.1,GeneID:4486975;Name=YP_854920.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854920.1;transl_table=11
NC_008570.1	RefSeq	gene	411288	412997	.	+	.	ID=gene392;Dbxref=GeneID:4486976;Name=AHA_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0392
NC_008570.1	RefSeq	CDS	411288	412997	.	+	0	ID=cds367;Parent=gene392;Dbxref=Genbank:YP_854921.1,GeneID:4486976;Name=YP_854921.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157;gbkey=CDS;product=type IV pilin;protein_id=YP_854921.1;transl_table=11
NC_008570.1	RefSeq	gene	413051	414271	.	+	.	ID=gene393;Dbxref=GeneID:4486977;Name=AHA_0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0393
NC_008570.1	RefSeq	CDS	413051	414271	.	+	0	ID=cds368;Parent=gene393;Dbxref=Genbank:YP_854922.1,GeneID:4486977;Name=YP_854922.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;product=GspF family protein;protein_id=YP_854922.1;transl_table=11
NC_008570.1	RefSeq	gene	414449	414913	.	+	.	ID=gene394;Dbxref=GeneID:4486978;Name=AHA_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0394
NC_008570.1	RefSeq	CDS	414449	414913	.	+	0	ID=cds369;Parent=gene394;Dbxref=Genbank:YP_854923.1,GeneID:4486978;Name=YP_854923.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854923.1;transl_table=11
NC_008570.1	RefSeq	gene	414987	415658	.	+	.	ID=gene395;Dbxref=GeneID:4487193;Name=AHA_0395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0395
NC_008570.1	RefSeq	CDS	414987	415658	.	+	0	ID=cds370;Parent=gene395;Dbxref=Genbank:YP_854924.1,GeneID:4487193;Name=YP_854924.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=msha pilin protein mshb;protein_id=YP_854924.1;transl_table=11
NC_008570.1	RefSeq	gene	416158	416649	.	+	.	ID=gene396;Dbxref=GeneID:4487194;Name=AHA_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0396
NC_008570.1	RefSeq	CDS	416158	416649	.	+	0	ID=cds371;Parent=gene396;Dbxref=Genbank:YP_854925.1,GeneID:4487194;Name=YP_854925.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=msha pilin protein mshc;protein_id=YP_854925.1;transl_table=11
NC_008570.1	RefSeq	gene	416636	417199	.	+	.	ID=gene397;Dbxref=GeneID:4487195;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=AHA_0397
NC_008570.1	RefSeq	CDS	416636	417199	.	+	0	ID=cds372;Parent=gene397;Dbxref=Genbank:YP_854926.1,GeneID:4487195;Name=YP_854926.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=mshD;product=msha pilin protein mshd;protein_id=YP_854926.1;transl_table=11
NC_008570.1	RefSeq	gene	417199	418020	.	+	.	ID=gene398;Dbxref=GeneID:4487196;Name=AHA_0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0398
NC_008570.1	RefSeq	CDS	417199	418020	.	+	0	ID=cds373;Parent=gene398;Dbxref=Genbank:YP_854927.1,GeneID:4487196;Name=YP_854927.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=msha biogenesis protein msho;protein_id=YP_854927.1;transl_table=11
NC_008570.1	RefSeq	gene	418483	422166	.	+	.	ID=gene399;Dbxref=GeneID:4487197;Name=AHA_0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0399
NC_008570.1	RefSeq	CDS	418483	422166	.	+	0	ID=cds374;Parent=gene399;Dbxref=Genbank:YP_854928.1,GeneID:4487197;Name=YP_854928.1;gbkey=CDS;product=protein MshQ;protein_id=YP_854928.1;transl_table=11
NC_008570.1	RefSeq	gene	422371	423411	.	+	.	ID=gene400;Dbxref=GeneID:4487198;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AHA_0400
NC_008570.1	RefSeq	CDS	422371	423411	.	+	0	ID=cds375;Parent=gene400;Dbxref=Genbank:YP_854929.1,GeneID:4487198;Name=YP_854929.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;gene=mreB;product=rod shape-determining protein MreB;protein_id=YP_854929.1;transl_table=11
NC_008570.1	RefSeq	gene	423454	424359	.	+	.	ID=gene401;Dbxref=GeneID:4487199;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AHA_0401
NC_008570.1	RefSeq	CDS	423454	424359	.	+	0	ID=cds376;Parent=gene401;Dbxref=Genbank:YP_854930.1,GeneID:4487199;Name=YP_854930.1;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=YP_854930.1;transl_table=11
NC_008570.1	RefSeq	gene	424359	424844	.	+	.	ID=gene402;Dbxref=GeneID:4487200;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AHA_0402
NC_008570.1	RefSeq	CDS	424359	424844	.	+	0	ID=cds377;Parent=gene402;Dbxref=Genbank:YP_854931.1,GeneID:4487200;Name=YP_854931.1;Note=identified by match to protein family HMM PF04093;gbkey=CDS;gene=mreD;product=rod shape-determining protein MreD;protein_id=YP_854931.1;transl_table=11
NC_008570.1	RefSeq	gene	424896	425483	.	+	.	ID=gene403;Dbxref=GeneID:4487201;Name=maf-1;gbkey=Gene;gene=maf-1;gene_biotype=protein_coding;locus_tag=AHA_0403
NC_008570.1	RefSeq	CDS	424896	425483	.	+	0	ID=cds378;Parent=gene403;Dbxref=Genbank:YP_854932.1,GeneID:4487201;Name=YP_854932.1;Note=identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172;gbkey=CDS;gene=maf-1;product=septum formation protein Maf;protein_id=YP_854932.1;transl_table=11
NC_008570.1	RefSeq	gene	425670	427139	.	+	.	ID=gene404;Dbxref=GeneID:4487202;Name=AHA_0404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0404
NC_008570.1	RefSeq	CDS	425670	427139	.	+	0	ID=cds379;Parent=gene404;Dbxref=Genbank:YP_854933.1,GeneID:4487202;Name=YP_854933.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=YP_854933.1;transl_table=11
NC_008570.1	RefSeq	gene	427170	431039	.	+	.	ID=gene405;Dbxref=GeneID:4487203;Name=AHA_0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0405
NC_008570.1	RefSeq	CDS	427170	431039	.	+	0	ID=cds380;Parent=gene405;Dbxref=Genbank:YP_854934.1,GeneID:4487203;Name=YP_854934.1;Note=identified by match to protein family HMM TIGR02099;gbkey=CDS;product=hypothetical protein;protein_id=YP_854934.1;transl_table=11
NC_008570.1	RefSeq	gene	431074	431394	.	+	.	ID=gene406;Dbxref=GeneID:4487204;Name=AHA_0406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0406
NC_008570.1	RefSeq	CDS	431074	431394	.	+	0	ID=cds381;Parent=gene406;Dbxref=Genbank:YP_854935.1,GeneID:4487204;Name=YP_854935.1;Note=identified by match to protein family HMM PF07876;gbkey=CDS;product=stress responsive A/B barrel domain family protein;protein_id=YP_854935.1;transl_table=11
NC_008570.1	RefSeq	gene	431423	432229	.	+	.	ID=gene407;Dbxref=GeneID:4487205;Name=AHA_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0407
NC_008570.1	RefSeq	CDS	431423	432229	.	+	0	ID=cds382;Parent=gene407;Dbxref=Genbank:YP_854936.1,GeneID:4487205;Name=YP_854936.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;product=carbon-nitrogen family hydrolase;protein_id=YP_854936.1;transl_table=11
NC_008570.1	RefSeq	gene	432389	433828	.	+	.	ID=gene408;Dbxref=GeneID:4487206;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AHA_0408
NC_008570.1	RefSeq	CDS	432389	433828	.	+	0	ID=cds383;Parent=gene408;Dbxref=Genbank:YP_854937.1,GeneID:4487206;Name=YP_854937.1;Note=identified by similarity to SP:P46473%3B match to protein family HMM PF01523;gbkey=CDS;gene=tldD;product=protein TldD;protein_id=YP_854937.1;transl_table=11
NC_008570.1	RefSeq	gene	433861	434721	.	+	.	ID=gene409;Dbxref=GeneID:4487207;Name=AHA_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0409
NC_008570.1	RefSeq	CDS	433861	434721	.	+	0	ID=cds384;Parent=gene409;Dbxref=Genbank:YP_854938.1,GeneID:4487207;Name=YP_854938.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=YP_854938.1;transl_table=11
NC_008570.1	RefSeq	gene	434809	435414	.	-	.	ID=gene410;Dbxref=GeneID:4487208;Name=AHA_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0410
NC_008570.1	RefSeq	CDS	434809	435414	.	-	0	ID=cds385;Parent=gene410;Dbxref=Genbank:YP_854939.1,GeneID:4487208;Name=YP_854939.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854939.1;transl_table=11
NC_008570.1	RefSeq	gene	435464	436537	.	-	.	ID=gene411;Dbxref=GeneID:4487209;Name=AHA_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0411
NC_008570.1	RefSeq	CDS	435464	436537	.	-	0	ID=cds386;Parent=gene411;Dbxref=Genbank:YP_854940.1,GeneID:4487209;Name=YP_854940.1;gbkey=CDS;product=outer membrane protein;protein_id=YP_854940.1;transl_table=11
NC_008570.1	RefSeq	gene	436639	438093	.	-	.	ID=gene412;Dbxref=GeneID:4487210;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;gene_synonym=yfeV;locus_tag=AHA_0412
NC_008570.1	RefSeq	CDS	436639	438093	.	-	0	ID=cds387;Parent=gene412;Dbxref=Genbank:YP_854941.1,GeneID:4487210;Name=YP_854941.1;Note=belongs to PEP-dependent PTS system%3B contains the PTS EIIBC domains%3B involved in uptake of exogenous N-acetylmuramic acid (MurNAc)%3B requires crr-encoded enzyme IIA-glucose component;gbkey=CDS;gene=murP;product=PTS system N-acetylmuramic acid transporter subunit IIBC;protein_id=YP_854941.1;transl_table=11
NC_008570.1	RefSeq	gene	438193	439089	.	-	.	ID=gene413;Dbxref=GeneID:4487211;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=AHA_0413
NC_008570.1	RefSeq	CDS	438193	439089	.	-	0	ID=cds388;Parent=gene413;Dbxref=Genbank:YP_854942.1,GeneID:4487211;Name=YP_854942.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=YP_854942.1;transl_table=11
NC_008570.1	RefSeq	gene	439353	439607	.	-	.	ID=gene414;Dbxref=GeneID:4488384;Name=AHA_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0414
NC_008570.1	RefSeq	CDS	439353	439607	.	-	0	ID=cds389;Parent=gene414;Dbxref=Genbank:YP_854943.1,GeneID:4488384;Name=YP_854943.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854943.1;transl_table=11
NC_008570.1	RefSeq	gene	439717	440436	.	-	.	ID=gene415;Dbxref=GeneID:4488385;Name=AHA_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0415
NC_008570.1	RefSeq	CDS	439717	440436	.	-	0	ID=cds390;Parent=gene415;Dbxref=Genbank:YP_854944.1,GeneID:4488385;Name=YP_854944.1;Note=protein involved in resistance to different drugs (tetracycline%2C chloramphenicol%2C beta-lactams%2C and quinolones)%3B part of the multiple antibiotic resistance (mar) locus%2C which is composed by the genes marC and marRAB%3B unknown function;gbkey=CDS;product=multiple drug resistance protein MarC;protein_id=YP_854944.1;transl_table=11
NC_008570.1	RefSeq	gene	440568	441884	.	-	.	ID=gene416;Dbxref=GeneID:4488386;Name=AHA_0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0416
NC_008570.1	RefSeq	CDS	440568	441884	.	-	0	ID=cds391;Parent=gene416;Dbxref=Genbank:YP_854945.1,GeneID:4488386;Name=YP_854945.1;Note=identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_854945.1;transl_table=11
NC_008570.1	RefSeq	gene	442132	442803	.	+	.	ID=gene417;Dbxref=GeneID:4488387;Name=AHA_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0418
NC_008570.1	RefSeq	CDS	442132	442803	.	+	0	ID=cds392;Parent=gene417;Dbxref=Genbank:YP_854946.1,GeneID:4488387;Name=YP_854946.1;Note=identified by match to protein family HMM PF01902;gbkey=CDS;product=hypothetical protein;protein_id=YP_854946.1;transl_table=11
NC_008570.1	RefSeq	gene	442800	444002	.	-	.	ID=gene418;Dbxref=GeneID:4488388;Name=AHA_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0417
NC_008570.1	RefSeq	CDS	442800	444002	.	-	0	ID=cds393;Parent=gene418;Dbxref=Genbank:YP_854947.1,GeneID:4488388;Name=YP_854947.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=regulatory components of sensory transduction system;protein_id=YP_854947.1;transl_table=11
NC_008570.1	RefSeq	gene	443941	446607	.	-	.	ID=gene419;Dbxref=GeneID:4488389;Name=AHA_0419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0419
NC_008570.1	RefSeq	CDS	443941	446607	.	-	0	ID=cds394;Parent=gene419;Dbxref=Genbank:YP_854948.1,GeneID:4488389;Name=YP_854948.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=hybrid sensory kinase;protein_id=YP_854948.1;transl_table=11
NC_008570.1	RefSeq	gene	446608	447678	.	-	.	ID=gene420;Dbxref=GeneID:4488390;Name=AHA_0420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0420
NC_008570.1	RefSeq	CDS	446608	447678	.	-	0	ID=cds395;Parent=gene420;Dbxref=Genbank:YP_854949.1,GeneID:4488390;Name=YP_854949.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF07228;gbkey=CDS;product=TorS-like protein;protein_id=YP_854949.1;transl_table=11
NC_008570.1	RefSeq	gene	447685	448059	.	-	.	ID=gene421;Dbxref=GeneID:4488391;Name=AHA_0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0421
NC_008570.1	RefSeq	CDS	447685	448059	.	-	0	ID=cds396;Parent=gene421;Dbxref=Genbank:YP_854950.1,GeneID:4488391;Name=YP_854950.1;gbkey=CDS;product=sigma-B regulator RsbS;protein_id=YP_854950.1;transl_table=11
NC_008570.1	RefSeq	gene	448069	449460	.	-	.	ID=gene422;Dbxref=GeneID:4488392;Name=AHA_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0422
NC_008570.1	RefSeq	CDS	448069	449460	.	-	0	ID=cds397;Parent=gene422;Dbxref=Genbank:YP_854951.1,GeneID:4488392;Name=YP_854951.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM PF01740%3B match to protein family HMM TIGR00229;gbkey=CDS;product=chemotaxis protein;protein_id=YP_854951.1;transl_table=11
NC_008570.1	RefSeq	gene	449431	450123	.	+	.	ID=gene423;Dbxref=GeneID:4488393;Name=AHA_0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0424
NC_008570.1	RefSeq	CDS	449431	450123	.	+	0	ID=cds398;Parent=gene423;Dbxref=Genbank:YP_854952.1,GeneID:4488393;Name=YP_854952.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311%3B match to protein family HMM PF07883;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_854952.1;transl_table=11
NC_008570.1	RefSeq	gene	450089	450508	.	-	.	ID=gene424;Dbxref=GeneID:4488394;Name=AHA_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0423
NC_008570.1	RefSeq	CDS	450089	450508	.	-	0	ID=cds399;Parent=gene424;Dbxref=Genbank:YP_854953.1,GeneID:4488394;Name=YP_854953.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854953.1;transl_table=11
NC_008570.1	RefSeq	gene	450541	451434	.	+	.	ID=gene425;Dbxref=GeneID:4488395;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AHA_0425
NC_008570.1	RefSeq	CDS	450541	451434	.	+	0	ID=cds400;Parent=gene425;Dbxref=Genbank:YP_854954.1,GeneID:4488395;Name=YP_854954.1;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;gbkey=CDS;gene=aphA;product=acid phosphatase/phosphotransferase;protein_id=YP_854954.1;transl_table=11
NC_008570.1	RefSeq	gene	451497	452342	.	-	.	ID=gene426;Dbxref=GeneID:4488396;Name=AHA_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0426
NC_008570.1	RefSeq	CDS	451497	452342	.	-	0	ID=cds401;Parent=gene426;Dbxref=Genbank:YP_854955.1,GeneID:4488396;Name=YP_854955.1;Note=identified by match to protein family HMM PF04228;gbkey=CDS;product=zinc protease;protein_id=YP_854955.1;transl_table=11
NC_008570.1	RefSeq	gene	452450	452713	.	-	.	ID=gene427;Dbxref=GeneID:4488397;Name=AHA_0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0427
NC_008570.1	RefSeq	CDS	452450	452713	.	-	0	ID=cds402;Parent=gene427;Dbxref=Genbank:YP_854956.1,GeneID:4488397;Name=YP_854956.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854956.1;transl_table=11
NC_008570.1	RefSeq	gene	452830	453708	.	+	.	ID=gene428;Dbxref=GeneID:4488398;Name=AHA_0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0428
NC_008570.1	RefSeq	CDS	452830	453708	.	+	0	ID=cds403;Parent=gene428;Dbxref=Genbank:YP_854957.1,GeneID:4488398;Name=YP_854957.1;Note=identified by match to protein family HMM TIGR00277;gbkey=CDS;product=hypothetical protein;protein_id=YP_854957.1;transl_table=11
NC_008570.1	RefSeq	gene	453826	454347	.	+	.	ID=gene429;Dbxref=GeneID:4488399;Name=AHA_0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0429
NC_008570.1	RefSeq	CDS	453826	454347	.	+	0	ID=cds404;Parent=gene429;Dbxref=Genbank:YP_854958.1,GeneID:4488399;Name=YP_854958.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_854958.1;transl_table=11
NC_008570.1	RefSeq	gene	454474	454650	.	-	.	ID=gene430;Dbxref=GeneID:4488400;Name=AHA_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0430
NC_008570.1	RefSeq	CDS	454474	454650	.	-	0	ID=cds405;Parent=gene430;Dbxref=Genbank:YP_854959.1,GeneID:4488400;Name=YP_854959.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854959.1;transl_table=11
NC_008570.1	RefSeq	gene	455122	456399	.	-	.	ID=gene431;Dbxref=GeneID:4488401;Name=AHA_0431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0431
NC_008570.1	RefSeq	CDS	455122	456399	.	-	0	ID=cds406;Parent=gene431;Dbxref=Genbank:YP_854960.1,GeneID:4488401;Name=YP_854960.1;Note=identified by match to protein family HMM PF00999;gbkey=CDS;product=NhaP-type Na+/H+ and K+/H+ antiporters;protein_id=YP_854960.1;transl_table=11
NC_008570.1	RefSeq	gene	456603	460286	.	+	.	ID=gene432;Dbxref=GeneID:4488402;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AHA_0432
NC_008570.1	RefSeq	CDS	456603	460286	.	+	0	ID=cds407;Parent=gene432;Dbxref=Genbank:YP_854961.1,GeneID:4488402;Name=YP_854961.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=YP_854961.1;transl_table=11
NC_008570.1	RefSeq	gene	460466	461422	.	+	.	ID=gene433;Dbxref=GeneID:4488403;Name=AHA_0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0433
NC_008570.1	RefSeq	CDS	460466	461422	.	+	0	ID=cds408;Parent=gene433;Dbxref=Genbank:YP_854962.1,GeneID:4488403;Name=YP_854962.1;Note=identified by match to protein family HMM PF02655%3B match to protein family HMM TIGR00768;gbkey=CDS;product=ribosomal protein S6 modification protein;protein_id=YP_854962.1;transl_table=11
NC_008570.1	RefSeq	gene	461811	463145	.	+	.	ID=gene434;Dbxref=GeneID:4490397;Name=brnQ-1;gbkey=Gene;gene=brnQ-1;gene_biotype=protein_coding;locus_tag=AHA_0434
NC_008570.1	RefSeq	CDS	461811	463145	.	+	0	ID=cds409;Parent=gene434;Dbxref=Genbank:YP_854963.1,GeneID:4490397;Name=YP_854963.1;Note=identified by similarity to SP:P37011%3B match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ-1;product=branched-chain amino acid transport system II carrier protein;protein_id=YP_854963.1;transl_table=11
NC_008570.1	RefSeq	gene	463220	464431	.	-	.	ID=gene435;Dbxref=GeneID:4490398;Name=AHA_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0435
NC_008570.1	RefSeq	CDS	463220	464431	.	-	0	ID=cds410;Parent=gene435;Dbxref=Genbank:YP_854964.1,GeneID:4490398;Name=YP_854964.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672;gbkey=CDS;product=sensory transduction protein kinase;protein_id=YP_854964.1;transl_table=11
NC_008570.1	RefSeq	gene	464475	465746	.	-	.	ID=gene436;Dbxref=GeneID:4490399;Name=AHA_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0436
NC_008570.1	RefSeq	CDS	464475	465746	.	-	0	ID=cds411;Parent=gene436;Dbxref=Genbank:YP_854965.1,GeneID:4490399;Name=YP_854965.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=response regulator;protein_id=YP_854965.1;transl_table=11
NC_008570.1	RefSeq	gene	465736	466215	.	+	.	ID=gene437;Dbxref=GeneID:4490400;Name=AHA_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0437
NC_008570.1	RefSeq	CDS	465736	466215	.	+	0	ID=cds412;Parent=gene437;Dbxref=Genbank:YP_854966.1,GeneID:4490400;Name=YP_854966.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854966.1;transl_table=11
NC_008570.1	RefSeq	gene	466510	467991	.	+	.	ID=gene438;Dbxref=GeneID:4490401;Name=AHA_0438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0438
NC_008570.1	RefSeq	CDS	466510	467991	.	+	0	ID=cds413;Parent=gene438;Dbxref=Genbank:YP_854967.1,GeneID:4490401;Name=YP_854967.1;Note=identified by match to protein family HMM PF01117%3B match to protein family HMM PF03440;gbkey=CDS;product=hemolysin;protein_id=YP_854967.1;transl_table=11
NC_008570.1	RefSeq	gene	468494	470485	.	+	.	ID=gene439;Dbxref=GeneID:4490402;Name=AHA_0439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0439
NC_008570.1	RefSeq	CDS	468494	470485	.	+	0	ID=cds414;Parent=gene439;Dbxref=Genbank:YP_854968.1,GeneID:4490402;Name=YP_854968.1;Note=required for the synthesis of the hydromethylpyrimidine moiety of thiamine;gbkey=CDS;product=thiamine biosynthesis protein ThiC;protein_id=YP_854968.1;transl_table=11
NC_008570.1	RefSeq	gene	470482	472098	.	+	.	ID=gene440;Dbxref=GeneID:4490403;Name=AHA_0440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0440
NC_008570.1	RefSeq	CDS	470482	472098	.	+	0	ID=cds415;Parent=gene440;Dbxref=Genbank:YP_854969.1,GeneID:4490403;Name=YP_854969.1;Note=identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00097%3B match to protein family HMM TIGR00693;gbkey=CDS;product=thiamine monophosphate synthase;protein_id=YP_854969.1;transl_table=11
NC_008570.1	RefSeq	gene	472161	472919	.	+	.	ID=gene441;Dbxref=GeneID:4490404;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AHA_0441
NC_008570.1	RefSeq	CDS	472161	472919	.	+	0	ID=cds416;Parent=gene441;Dbxref=Genbank:YP_854970.1,GeneID:4490404;Name=YP_854970.1;Note=identified by similarity to SP:P30138%3B match to protein family HMM PF00899%3B match to protein family HMM PF05237;gbkey=CDS;gene=thiF;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=YP_854970.1;transl_table=11
NC_008570.1	RefSeq	gene	472889	473122	.	+	.	ID=gene442;Dbxref=GeneID:4490405;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AHA_0442
NC_008570.1	RefSeq	CDS	472889	473122	.	+	0	ID=cds417;Parent=gene442;Dbxref=Genbank:YP_854971.1,GeneID:4490405;Name=YP_854971.1;Note=identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683;gbkey=CDS;gene=thiS;product=thiamine biosynthesis protein ThiS;protein_id=YP_854971.1;transl_table=11
NC_008570.1	RefSeq	gene	473124	473891	.	+	.	ID=gene443;Dbxref=GeneID:4490406;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AHA_0443
NC_008570.1	RefSeq	CDS	473124	473891	.	+	0	ID=cds418;Parent=gene443;Dbxref=Genbank:YP_854972.2,GeneID:4490406;Name=YP_854972.2;Note=functions in thiamine (vitamin B1) biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;gbkey=CDS;gene=thiG;product=thiazole synthase;protein_id=YP_854972.2;transl_table=11
NC_008570.1	RefSeq	gene	473927	475198	.	+	.	ID=gene444;Dbxref=GeneID:4490407;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AHA_0444
NC_008570.1	RefSeq	CDS	473927	475198	.	+	0	ID=cds419;Parent=gene444;Dbxref=Genbank:YP_854973.1,GeneID:4490407;Name=YP_854973.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR02351;gbkey=CDS;gene=thiH;product=thiazole biosynthesis protein ThiH;protein_id=YP_854973.1;transl_table=11
NC_008570.1	RefSeq	gene	476309	478207	.	+	.	ID=gene445;Dbxref=GeneID:4490408;Name=AHA_0445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0445
NC_008570.1	RefSeq	CDS	476309	478207	.	+	0	ID=cds420;Parent=gene445;Dbxref=Genbank:YP_854975.1,GeneID:4490408;Name=YP_854975.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854975.1;transl_table=11
NC_008570.1	RefSeq	gene	478359	479021	.	-	.	ID=gene446;Dbxref=GeneID:4490409;Name=AHA_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0446
NC_008570.1	RefSeq	CDS	478359	479021	.	-	0	ID=cds421;Parent=gene446;Dbxref=Genbank:YP_854976.1,GeneID:4490409;Name=YP_854976.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_854976.1;transl_table=11
NC_008570.1	RefSeq	gene	479239	479820	.	+	.	ID=gene447;Dbxref=GeneID:4490410;Name=AHA_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0447
NC_008570.1	RefSeq	CDS	479239	479820	.	+	0	ID=cds422;Parent=gene447;Dbxref=Genbank:YP_854978.1,GeneID:4490410;Name=YP_854978.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854978.1;transl_table=11
NC_008570.1	RefSeq	gene	479899	480315	.	-	.	ID=gene448;Dbxref=GeneID:4490411;Name=AHA_0448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0448
NC_008570.1	RefSeq	CDS	479899	480315	.	-	0	ID=cds423;Parent=gene448;Dbxref=Genbank:YP_854979.1,GeneID:4490411;Name=YP_854979.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_854979.1;transl_table=11
NC_008570.1	RefSeq	gene	480428	480745	.	-	.	ID=gene449;Dbxref=GeneID:4490412;Name=AHA_0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0449
NC_008570.1	RefSeq	CDS	480428	480745	.	-	0	ID=cds424;Parent=gene449;Dbxref=Genbank:YP_854980.1,GeneID:4490412;Name=YP_854980.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854980.1;transl_table=11
NC_008570.1	RefSeq	gene	481080	481985	.	+	.	ID=gene450;Dbxref=GeneID:4490413;Name=AHA_0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0450
NC_008570.1	RefSeq	CDS	481080	481985	.	+	0	ID=cds425;Parent=gene450;Dbxref=Genbank:YP_854982.1,GeneID:4490413;Name=YP_854982.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_854982.1;transl_table=11
NC_008570.1	RefSeq	gene	482444	483718	.	+	.	ID=gene451;Dbxref=GeneID:4490414;Name=AHA_0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0451
NC_008570.1	RefSeq	CDS	482444	483718	.	+	0	ID=cds426;Parent=gene451;Dbxref=Genbank:YP_854984.1,GeneID:4490414;Name=YP_854984.1;Note=identified by match to protein family HMM PF03222;gbkey=CDS;product=serine transporter;protein_id=YP_854984.1;transl_table=11
NC_008570.1	RefSeq	gene	483782	484489	.	-	.	ID=gene452;Dbxref=GeneID:4490415;Name=AHA_0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0452
NC_008570.1	RefSeq	CDS	483782	484489	.	-	0	ID=cds427;Parent=gene452;Dbxref=Genbank:YP_854985.1,GeneID:4490415;Name=YP_854985.1;Note=identified by match to protein family HMM PF06055;gbkey=CDS;product=protein ExoD;protein_id=YP_854985.1;transl_table=11
NC_008570.1	RefSeq	gene	484671	485291	.	+	.	ID=gene453;Dbxref=GeneID:4488851;Name=AHA_0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0453
NC_008570.1	RefSeq	CDS	484671	485291	.	+	0	ID=cds428;Parent=gene453;Dbxref=Genbank:YP_854986.1,GeneID:4488851;Name=YP_854986.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854986.1;transl_table=11
NC_008570.1	RefSeq	gene	485288	485839	.	+	.	ID=gene454;Dbxref=GeneID:4488852;Name=AHA_0455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0455
NC_008570.1	RefSeq	CDS	485288	485839	.	+	0	ID=cds429;Parent=gene454;Dbxref=Genbank:YP_854987.1,GeneID:4488852;Name=YP_854987.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_854987.1;transl_table=11
NC_008570.1	RefSeq	gene	485820	486125	.	-	.	ID=gene455;Dbxref=GeneID:4488853;Name=AHA_0454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0454
NC_008570.1	RefSeq	CDS	485820	486125	.	-	0	ID=cds430;Parent=gene455;Dbxref=Genbank:YP_854988.1,GeneID:4488853;Name=YP_854988.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854988.1;transl_table=11
NC_008570.1	RefSeq	gene	486247	486612	.	+	.	ID=gene456;Dbxref=GeneID:4488854;Name=AHA_0457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0457
NC_008570.1	RefSeq	CDS	486247	486612	.	+	0	ID=cds431;Parent=gene456;Dbxref=Genbank:YP_854989.1,GeneID:4488854;Name=YP_854989.1;Note=identified by match to protein family HMM PF01638;gbkey=CDS;product=transcriptional regulator;protein_id=YP_854989.1;transl_table=11
NC_008570.1	RefSeq	gene	486609	487043	.	-	.	ID=gene457;Dbxref=GeneID:4488855;Name=AHA_0456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0456
NC_008570.1	RefSeq	CDS	486609	487043	.	-	0	ID=cds432;Parent=gene457;Dbxref=Genbank:YP_854990.1,GeneID:4488855;Name=YP_854990.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_854990.1;transl_table=11
NC_008570.1	RefSeq	gene	487169	487858	.	-	.	ID=gene458;Dbxref=GeneID:4488856;Name=AHA_0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0458
NC_008570.1	RefSeq	CDS	487169	487858	.	-	0	ID=cds433;Parent=gene458;Dbxref=Genbank:YP_854991.1,GeneID:4488856;Name=YP_854991.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854991.1;transl_table=11
NC_008570.1	RefSeq	gene	487871	488908	.	-	.	ID=gene459;Dbxref=GeneID:4488857;Name=AHA_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0459
NC_008570.1	RefSeq	CDS	487871	488908	.	-	0	ID=cds434;Parent=gene459;Dbxref=Genbank:YP_854992.1,GeneID:4488857;Name=YP_854992.1;gbkey=CDS;product=fucose 4-O-acetylase;protein_id=YP_854992.1;transl_table=11
NC_008570.1	RefSeq	gene	489085	489720	.	-	.	ID=gene460;Dbxref=GeneID:4488858;Name=AHA_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0460
NC_008570.1	RefSeq	CDS	489085	489720	.	-	0	ID=cds435;Parent=gene460;Dbxref=Genbank:YP_854993.1,GeneID:4488858;Name=YP_854993.1;Note=identified by match to protein family HMM PF03929;gbkey=CDS;product=PepSY-associated TM helix family protein;protein_id=YP_854993.1;transl_table=11
NC_008570.1	RefSeq	gene	489771	491813	.	-	.	ID=gene461;Dbxref=GeneID:4488859;Name=AHA_0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0461
NC_008570.1	RefSeq	CDS	489771	491813	.	-	0	ID=cds436;Parent=gene461;Dbxref=Genbank:YP_854994.1,GeneID:4488859;Name=YP_854994.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01783;gbkey=CDS;product=TonB-dependent siderophore receptor;protein_id=YP_854994.1;transl_table=11
NC_008570.1	RefSeq	gene	492040	492951	.	-	.	ID=gene462;Dbxref=GeneID:4488860;Name=AHA_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0462
NC_008570.1	RefSeq	CDS	492040	492951	.	-	0	ID=cds437;Parent=gene462;Dbxref=Genbank:YP_854995.1,GeneID:4488860;Name=YP_854995.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_854995.1;transl_table=11
NC_008570.1	RefSeq	gene	493069	494283	.	-	.	ID=gene463;Dbxref=GeneID:4488861;Name=AHA_0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0463
NC_008570.1	RefSeq	CDS	493069	494283	.	-	0	ID=cds438;Parent=gene463;Dbxref=Genbank:YP_854996.1,GeneID:4488861;Name=YP_854996.1;Note=identified by match to protein family HMM PF00267;gbkey=CDS;product=hypothetical protein;protein_id=YP_854996.1;transl_table=11
NC_008570.1	RefSeq	gene	494354	495364	.	+	.	ID=gene464;Dbxref=GeneID:4488862;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AHA_0464
NC_008570.1	RefSeq	CDS	494354	495364	.	+	0	ID=cds439;Parent=gene464;Dbxref=Genbank:YP_854997.1,GeneID:4488862;Name=YP_854997.1;Note=type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese;gbkey=CDS;gene=glpX;product=fructose 1%2C6-bisphosphatase II;protein_id=YP_854997.1;transl_table=11
NC_008570.1	RefSeq	gene	495522	495773	.	+	.	ID=gene465;Dbxref=GeneID:4488863;Name=AHA_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0465
NC_008570.1	RefSeq	CDS	495522	495773	.	+	0	ID=cds440;Parent=gene465;Dbxref=Genbank:YP_854998.1,GeneID:4488863;Name=YP_854998.1;Note=identified by match to protein family HMM PF03692;gbkey=CDS;product=proteinase inhibitor;protein_id=YP_854998.1;transl_table=11
NC_008570.1	RefSeq	gene	495930	497093	.	-	.	ID=gene466;Dbxref=GeneID:4488864;Name=AHA_0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0466
NC_008570.1	RefSeq	CDS	495930	497093	.	-	0	ID=cds441;Parent=gene466;Dbxref=Genbank:YP_854999.1,GeneID:4488864;Name=YP_854999.1;Note=identified by match to protein family HMM PF07219%3B match to protein family HMM PF07721;gbkey=CDS;product=HemY protein;protein_id=YP_854999.1;transl_table=11
NC_008570.1	RefSeq	gene	497104	498180	.	-	.	ID=gene467;Dbxref=GeneID:4488885;Name=AHA_0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0467
NC_008570.1	RefSeq	CDS	497104	498180	.	-	0	ID=cds442;Parent=gene467;Dbxref=Genbank:YP_855000.1,GeneID:4488885;Name=YP_855000.1;Note=identified by match to protein family HMM PF04375;gbkey=CDS;product=uroporphyrin-III C-methyltransferase;protein_id=YP_855000.1;transl_table=11
NC_008570.1	RefSeq	gene	498177	498911	.	-	.	ID=gene468;Dbxref=GeneID:4488886;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AHA_0468
NC_008570.1	RefSeq	CDS	498177	498911	.	-	0	ID=cds443;Parent=gene468;Dbxref=Genbank:YP_855001.1,GeneID:4488886;Name=YP_855001.1;Note=identified by match to protein family HMM PF02602;gbkey=CDS;gene=hemD;product=uroporphyrinogen-III synthase;protein_id=YP_855001.1;transl_table=11
NC_008570.1	RefSeq	gene	498908	499855	.	-	.	ID=gene469;Dbxref=GeneID:4488887;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AHA_0469
NC_008570.1	RefSeq	CDS	498908	499855	.	-	0	ID=cds444;Parent=gene469;Dbxref=Genbank:YP_855002.2,GeneID:4488887;Name=YP_855002.2;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=YP_855002.2;transl_table=11
NC_008570.1	RefSeq	gene	500161	502695	.	+	.	ID=gene470;Dbxref=GeneID:4488888;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AHA_0470
NC_008570.1	RefSeq	CDS	500161	502695	.	+	0	ID=cds445;Parent=gene470;Dbxref=Genbank:YP_855003.1,GeneID:4488888;Name=YP_855003.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=YP_855003.1;transl_table=11
NC_008570.1	RefSeq	gene	502819	503490	.	-	.	ID=gene471;Dbxref=GeneID:4488889;Name=AHA_0471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0471
NC_008570.1	RefSeq	CDS	502819	503490	.	-	0	ID=cds446;Parent=gene471;Dbxref=Genbank:YP_855004.1,GeneID:4488889;Name=YP_855004.1;Note=identified by match to protein family HMM PF02230;gbkey=CDS;product=carboxylesterase 2;protein_id=YP_855004.1;transl_table=11
NC_008570.1	RefSeq	gene	503487	503801	.	-	.	ID=gene472;Dbxref=GeneID:4488890;Name=AHA_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0472
NC_008570.1	RefSeq	CDS	503487	503801	.	-	0	ID=cds447;Parent=gene472;Dbxref=Genbank:YP_855005.1,GeneID:4488890;Name=YP_855005.1;Note=identified by match to protein family HMM PF01491;gbkey=CDS;product=protein CyaY;protein_id=YP_855005.1;transl_table=11
NC_008570.1	RefSeq	gene	504072	505322	.	+	.	ID=gene473;Dbxref=GeneID:4488891;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AHA_0473
NC_008570.1	RefSeq	CDS	504072	505322	.	+	0	ID=cds448;Parent=gene473;Dbxref=Genbank:YP_855006.1,GeneID:4488891;Name=YP_855006.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=YP_855006.1;transl_table=11
NC_008570.1	RefSeq	gene	505388	506218	.	+	.	ID=gene474;Dbxref=GeneID:4488892;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AHA_0474
NC_008570.1	RefSeq	CDS	505388	506218	.	+	0	ID=cds449;Parent=gene474;Dbxref=Genbank:YP_855007.1,GeneID:4488892;Name=YP_855007.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=YP_855007.1;transl_table=11
NC_008570.1	RefSeq	gene	506329	506979	.	+	.	ID=gene475;Dbxref=GeneID:4488893;Name=AHA_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0475
NC_008570.1	RefSeq	CDS	506329	506979	.	+	0	ID=cds450;Parent=gene475;Dbxref=Genbank:YP_855008.1,GeneID:4488893;Name=YP_855008.1;Note=identified by match to protein family HMM PF04340;gbkey=CDS;product=hypothetical protein;protein_id=YP_855008.1;transl_table=11
NC_008570.1	RefSeq	gene	506972	507949	.	+	.	ID=gene476;Dbxref=GeneID:4488894;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AHA_0476
NC_008570.1	RefSeq	CDS	506972	507949	.	+	0	ID=cds451;Parent=gene476;Dbxref=Genbank:YP_855009.1,GeneID:4488894;Name=YP_855009.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02224;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=YP_855009.1;transl_table=11
NC_008570.1	RefSeq	gene	507990	508700	.	+	.	ID=gene477;Dbxref=GeneID:4488895;Name=AHA_0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0477
NC_008570.1	RefSeq	CDS	507990	508700	.	+	0	ID=cds452;Parent=gene477;Dbxref=Genbank:YP_855010.1,GeneID:4488895;Name=YP_855010.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;product=HAD-superfamily hydrolase;protein_id=YP_855010.1;transl_table=11
NC_008570.1	RefSeq	gene	508799	509209	.	-	.	ID=gene478;Dbxref=GeneID:4488896;Name=AHA_0478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0478
NC_008570.1	RefSeq	CDS	508799	509209	.	-	0	ID=cds453;Parent=gene478;Dbxref=Genbank:YP_855011.1,GeneID:4488896;Name=YP_855011.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855011.1;transl_table=11
NC_008570.1	RefSeq	gene	509242	510768	.	-	.	ID=gene479;Dbxref=GeneID:4488897;Name=AHA_0479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0479
NC_008570.1	RefSeq	CDS	509242	510768	.	-	0	ID=cds454;Parent=gene479;Dbxref=Genbank:YP_855012.1,GeneID:4488897;Name=YP_855012.1;Note=identified by match to protein family HMM PF00027%3B match to protein family HMM PF00924;gbkey=CDS;product=small conductance mechanosensitive ion channel (MscS) family protein;protein_id=YP_855012.1;transl_table=11
NC_008570.1	RefSeq	gene	510884	511297	.	+	.	ID=gene480;Dbxref=GeneID:4488898;Name=AHA_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0480
NC_008570.1	RefSeq	CDS	510884	511297	.	+	0	ID=cds455;Parent=gene480;Dbxref=Genbank:YP_855013.1,GeneID:4488898;Name=YP_855013.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855013.1;transl_table=11
NC_008570.1	RefSeq	gene	511307	512077	.	-	.	ID=gene481;Dbxref=GeneID:4488899;Name=AHA_0481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0481
NC_008570.1	RefSeq	CDS	511307	512077	.	-	0	ID=cds456;Parent=gene481;Dbxref=Genbank:YP_855014.1,GeneID:4488899;Name=YP_855014.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722;gbkey=CDS;product=glutamine amidotransferase;protein_id=YP_855014.1;transl_table=11
NC_008570.1	RefSeq	gene	512439	513248	.	-	.	ID=gene482;Dbxref=GeneID:4488900;Name=AHA_0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0482
NC_008570.1	RefSeq	CDS	512439	513248	.	-	0	ID=cds457;Parent=gene482;Dbxref=Genbank:YP_855015.1,GeneID:4488900;Name=YP_855015.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;product=phosphatase YidA;protein_id=YP_855015.1;transl_table=11
NC_008570.1	RefSeq	gene	513353	515047	.	-	.	ID=gene483;Dbxref=GeneID:4488901;Name=AHA_0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0483
NC_008570.1	RefSeq	CDS	513353	515047	.	-	0	ID=cds458;Parent=gene483;Dbxref=Genbank:YP_855016.1,GeneID:4488901;Name=YP_855016.1;Note=identified by match to protein family HMM PF03961;gbkey=CDS;product=hypothetical protein;protein_id=YP_855016.1;transl_table=11
NC_008570.1	RefSeq	gene	515309	516283	.	+	.	ID=gene484;Dbxref=GeneID:4488902;Name=AHA_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0484
NC_008570.1	RefSeq	CDS	515309	516283	.	+	0	ID=cds459;Parent=gene484;Dbxref=Genbank:YP_855017.1,GeneID:4488902;Name=YP_855017.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=membrane-fusion protein;protein_id=YP_855017.1;transl_table=11
NC_008570.1	RefSeq	gene	516276	517205	.	+	.	ID=gene485;Dbxref=GeneID:4488903;Name=AHA_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0485
NC_008570.1	RefSeq	CDS	516276	517205	.	+	0	ID=cds460;Parent=gene485;Dbxref=Genbank:YP_855018.1,GeneID:4488903;Name=YP_855018.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=YP_855018.1;transl_table=11
NC_008570.1	RefSeq	gene	517312	518406	.	+	.	ID=gene486;Dbxref=GeneID:4490068;Name=AHA_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0486
NC_008570.1	RefSeq	CDS	517312	518406	.	+	0	ID=cds461;Parent=gene486;Dbxref=Genbank:YP_855019.1,GeneID:4490068;Name=YP_855019.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_855019.1;transl_table=11
NC_008570.1	RefSeq	gene	518484	519641	.	-	.	ID=gene487;Dbxref=GeneID:4490069;Name=AHA_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0487
NC_008570.1	RefSeq	CDS	518484	519641	.	-	0	ID=cds462;Parent=gene487;Dbxref=Genbank:YP_855020.1,GeneID:4490069;Name=YP_855020.1;Note=identified by match to protein family HMM PF00994;gbkey=CDS;product=competence/damage-inducible protein CinA;protein_id=YP_855020.1;transl_table=11
NC_008570.1	RefSeq	gene	519702	521000	.	-	.	ID=gene488;Dbxref=GeneID:4490070;Name=AHA_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0488
NC_008570.1	RefSeq	CDS	519702	521000	.	-	0	ID=cds463;Parent=gene488;Dbxref=Genbank:YP_855021.1,GeneID:4490070;Name=YP_855021.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD-GYP domain-containing protein;protein_id=YP_855021.1;transl_table=11
NC_008570.1	RefSeq	gene	521085	522038	.	+	.	ID=gene489;Dbxref=GeneID:4490071;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AHA_0489
NC_008570.1	RefSeq	CDS	521085	522038	.	+	0	ID=cds464;Parent=gene489;Dbxref=Genbank:YP_855022.1,GeneID:4490071;Name=YP_855022.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=YP_855022.1;transl_table=11
NC_008570.1	RefSeq	gene	522047	522619	.	-	.	ID=gene490;Dbxref=GeneID:4490072;Name=AHA_0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0490
NC_008570.1	RefSeq	CDS	522047	522619	.	-	0	ID=cds465;Parent=gene490;Dbxref=Genbank:YP_855023.1,GeneID:4490072;Name=YP_855023.1;gbkey=CDS;product=protein tyrosine phosphatase;protein_id=YP_855023.1;transl_table=11
NC_008570.1	RefSeq	gene	522713	523183	.	+	.	ID=gene491;Dbxref=GeneID:4490073;Name=AHA_0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0491
NC_008570.1	RefSeq	CDS	522713	523183	.	+	0	ID=cds466;Parent=gene491;Dbxref=Genbank:YP_855024.1,GeneID:4490073;Name=YP_855024.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=YP_855024.1;transl_table=11
NC_008570.1	RefSeq	gene	523241	525205	.	-	.	ID=gene492;Dbxref=GeneID:4490074;Name=AHA_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0492
NC_008570.1	RefSeq	CDS	523241	525205	.	-	0	ID=cds467;Parent=gene492;Dbxref=Genbank:YP_855025.1,GeneID:4490074;Name=YP_855025.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;product=sulfatase;protein_id=YP_855025.1;transl_table=11
NC_008570.1	RefSeq	gene	525465	525722	.	+	.	ID=gene493;Dbxref=GeneID:4490075;Name=AHA_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0493
NC_008570.1	RefSeq	CDS	525465	525722	.	+	0	ID=cds468;Parent=gene493;Dbxref=Genbank:YP_855026.1,GeneID:4490075;Name=YP_855026.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855026.1;transl_table=11
NC_008570.1	RefSeq	gene	525968	527935	.	+	.	ID=gene494;Dbxref=GeneID:4490076;Name=AHA_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0494
NC_008570.1	RefSeq	CDS	525968	527935	.	+	0	ID=cds469;Parent=gene494;Dbxref=Genbank:YP_855027.1,GeneID:4490076;Name=YP_855027.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01778;gbkey=CDS;product=TonB-dependent copper receptor;protein_id=YP_855027.1;transl_table=11
NC_008570.1	RefSeq	gene	528005	529678	.	+	.	ID=gene495;Dbxref=GeneID:4490077;Name=AHA_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0495
NC_008570.1	RefSeq	CDS	528005	529678	.	+	0	ID=cds470;Parent=gene495;Dbxref=Genbank:YP_855028.1,GeneID:4490077;Name=YP_855028.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=glycosidase;protein_id=YP_855028.1;transl_table=11
NC_008570.1	RefSeq	gene	529733	530263	.	-	.	ID=gene496;Dbxref=GeneID:4490078;Name=AHA_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0496
NC_008570.1	RefSeq	CDS	529733	530263	.	-	0	ID=cds471;Parent=gene496;Dbxref=Genbank:YP_855029.1,GeneID:4490078;Name=YP_855029.1;Note=identified by match to protein family HMM PF02308;gbkey=CDS;product=Mg2+ transporter;protein_id=YP_855029.1;transl_table=11
NC_008570.1	RefSeq	gene	530291	531733	.	-	.	ID=gene497;Dbxref=GeneID:4490079;Name=AHA_0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0497
NC_008570.1	RefSeq	CDS	530291	531733	.	-	0	ID=cds472;Parent=gene497;Dbxref=Genbank:YP_855030.1,GeneID:4490079;Name=YP_855030.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855030.1;transl_table=11
NC_008570.1	RefSeq	gene	531920	532378	.	+	.	ID=gene498;Dbxref=GeneID:4490080;Name=AHA_0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0498
NC_008570.1	RefSeq	CDS	531920	532378	.	+	0	ID=cds473;Parent=gene498;Dbxref=Genbank:YP_855031.1,GeneID:4490080;Name=YP_855031.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=Pab N-terminal acetyltransferase;protein_id=YP_855031.1;transl_table=11
NC_008570.1	RefSeq	gene	532393	532638	.	+	.	ID=gene499;Dbxref=GeneID:4490081;Name=AHA_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0499
NC_008570.1	RefSeq	CDS	532393	532638	.	+	0	ID=cds474;Parent=gene499;Dbxref=Genbank:YP_855032.1,GeneID:4490081;Name=YP_855032.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855032.1;transl_table=11
NC_008570.1	RefSeq	gene	532695	533441	.	+	.	ID=gene500;Dbxref=GeneID:4490082;Name=AHA_0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0500
NC_008570.1	RefSeq	CDS	532695	533441	.	+	0	ID=cds475;Parent=gene500;Dbxref=Genbank:YP_855033.1,GeneID:4490082;Name=YP_855033.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370;gbkey=CDS;product=NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg;protein_id=YP_855033.1;transl_table=11
NC_008570.1	RefSeq	gene	533503	535107	.	-	.	ID=gene501;Dbxref=GeneID:4490083;Name=AHA_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0501
NC_008570.1	RefSeq	CDS	533503	535107	.	-	0	ID=cds476;Parent=gene501;Dbxref=Genbank:YP_855034.1,GeneID:4490083;Name=YP_855034.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;product=cytosol non-specific dipeptidase;protein_id=YP_855034.1;transl_table=11
NC_008570.1	RefSeq	gene	535441	535893	.	+	.	ID=gene502;Dbxref=GeneID:4490084;Name=AHA_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0502
NC_008570.1	RefSeq	CDS	535441	535893	.	+	0	ID=cds477;Parent=gene502;Dbxref=Genbank:YP_855035.1,GeneID:4490084;Name=YP_855035.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855035.1;transl_table=11
NC_008570.1	RefSeq	gene	536092	536673	.	-	.	ID=gene503;Dbxref=GeneID:4490085;Name=AHA_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0503
NC_008570.1	RefSeq	CDS	536092	536673	.	-	0	ID=cds478;Parent=gene503;Dbxref=Genbank:YP_855036.1,GeneID:4490085;Name=YP_855036.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855036.1;transl_table=11
NC_008570.1	RefSeq	gene	536885	538060	.	+	.	ID=gene504;Dbxref=GeneID:4490086;Name=AHA_0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0504
NC_008570.1	RefSeq	CDS	536885	538060	.	+	0	ID=cds479;Parent=gene504;Dbxref=Genbank:YP_855037.1,GeneID:4490086;Name=YP_855037.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=NADH-dependent iron-containing alcohol dehydrogenase;protein_id=YP_855037.1;transl_table=11
NC_008570.1	RefSeq	gene	538265	538963	.	-	.	ID=gene505;Dbxref=GeneID:4490087;Name=AHA_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0505
NC_008570.1	RefSeq	CDS	538265	538963	.	-	0	ID=cds480;Parent=gene505;Dbxref=Genbank:YP_855038.1,GeneID:4490087;Name=YP_855038.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_855038.1;transl_table=11
NC_008570.1	RefSeq	gene	539003	540271	.	-	.	ID=gene506;Dbxref=GeneID:4486998;Name=AHA_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0506
NC_008570.1	RefSeq	CDS	539003	540271	.	-	0	ID=cds481;Parent=gene506;Dbxref=Genbank:YP_855039.1,GeneID:4486998;Name=YP_855039.1;Note=identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01326;gbkey=CDS;product=O-acetylhomoserine sulfhydrylase MetY;protein_id=YP_855039.1;transl_table=11
NC_008570.1	RefSeq	gene	540428	540604	.	-	.	ID=gene507;Dbxref=GeneID:4486999;Name=AHA_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0507
NC_008570.1	RefSeq	CDS	540428	540604	.	-	0	ID=cds482;Parent=gene507;Dbxref=Genbank:YP_855040.1,GeneID:4486999;Name=YP_855040.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855040.1;transl_table=11
NC_008570.1	RefSeq	gene	540675	542438	.	+	.	ID=gene508;Dbxref=GeneID:4487000;Name=AHA_0508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0508
NC_008570.1	RefSeq	CDS	540675	542438	.	+	0	ID=cds483;Parent=gene508;Dbxref=Genbank:YP_855041.1,GeneID:4487000;Name=YP_855041.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=solute-binding family 5 protein;protein_id=YP_855041.1;transl_table=11
NC_008570.1	RefSeq	gene	542474	542869	.	+	.	ID=gene509;Dbxref=GeneID:4487001;Name=AHA_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0509
NC_008570.1	RefSeq	CDS	542474	542869	.	+	0	ID=cds484;Parent=gene509;Dbxref=Genbank:YP_855042.1,GeneID:4487001;Name=YP_855042.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;product=thioesterase family protein;protein_id=YP_855042.1;transl_table=11
NC_008570.1	RefSeq	gene	542901	543614	.	+	.	ID=gene510;Dbxref=GeneID:4487002;Name=AHA_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0510
NC_008570.1	RefSeq	CDS	542901	543614	.	+	0	ID=cds485;Parent=gene510;Dbxref=Genbank:YP_855043.1,GeneID:4487002;Name=YP_855043.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855043.1;transl_table=11
NC_008570.1	RefSeq	gene	543679	544422	.	-	.	ID=gene511;Dbxref=GeneID:4487003;Name=AHA_0511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0511
NC_008570.1	RefSeq	CDS	543679	544422	.	-	0	ID=cds486;Parent=gene511;Dbxref=Genbank:YP_855044.1,GeneID:4487003;Name=YP_855044.1;gbkey=CDS;product=lipase chaperone;protein_id=YP_855044.1;transl_table=11
NC_008570.1	RefSeq	gene	544419	545420	.	-	.	ID=gene512;Dbxref=GeneID:4487004;Name=AHA_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0512
NC_008570.1	RefSeq	CDS	544419	545420	.	-	0	ID=cds487;Parent=gene512;Dbxref=Genbank:YP_855045.1,GeneID:4487004;Name=YP_855045.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=lipase;protein_id=YP_855045.1;transl_table=11
NC_008570.1	RefSeq	gene	545500	545622	.	-	.	ID=gene513;Dbxref=GeneID:4487005;Name=AHA_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0513
NC_008570.1	RefSeq	CDS	545500	545622	.	-	0	ID=cds488;Parent=gene513;Dbxref=Genbank:YP_855046.1,GeneID:4487005;Name=YP_855046.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855046.1;transl_table=11
NC_008570.1	RefSeq	gene	545621	546046	.	+	.	ID=gene514;Dbxref=GeneID:4487006;Name=AHA_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0514
NC_008570.1	RefSeq	CDS	545621	546046	.	+	0	ID=cds489;Parent=gene514;Dbxref=Genbank:YP_855047.1,GeneID:4487006;Name=YP_855047.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855047.1;transl_table=11
NC_008570.1	RefSeq	gene	546068	546682	.	+	.	ID=gene515;Dbxref=GeneID:4487007;Name=AHA_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0515
NC_008570.1	RefSeq	CDS	546068	546682	.	+	0	ID=cds490;Parent=gene515;Dbxref=Genbank:YP_855048.1,GeneID:4487007;Name=YP_855048.1;Note=identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777;gbkey=CDS;product=superoxide dismutase (Mn);protein_id=YP_855048.1;transl_table=11
NC_008570.1	RefSeq	gene	546736	547761	.	-	.	ID=gene516;Dbxref=GeneID:4487008;Name=AHA_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0516
NC_008570.1	RefSeq	CDS	546736	547761	.	-	0	ID=cds491;Parent=gene516;Dbxref=Genbank:YP_855049.1,GeneID:4487008;Name=YP_855049.1;Note=identified by match to protein family HMM PF02698;gbkey=CDS;product=sanA protein;protein_id=YP_855049.1;transl_table=11
NC_008570.1	RefSeq	gene	547928	550675	.	-	.	ID=gene517;Dbxref=GeneID:4487009;Name=AHA_0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0517
NC_008570.1	RefSeq	CDS	547928	550675	.	-	0	ID=cds492;Parent=gene517;Dbxref=Genbank:YP_855050.1,GeneID:4487009;Name=YP_855050.1;Note=identified by match to protein family HMM PF01752;gbkey=CDS;product=collagenase family protein;protein_id=YP_855050.1;transl_table=11
NC_008570.1	RefSeq	gene	551179	551550	.	-	.	ID=gene518;Dbxref=GeneID:4487010;Name=AHA_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0518
NC_008570.1	RefSeq	CDS	551179	551550	.	-	0	ID=cds493;Parent=gene518;Dbxref=Genbank:YP_855051.1,GeneID:4487010;Name=YP_855051.1;Note=identified by similarity to GB:CAA54702.1;gbkey=CDS;product=fimbrial protein;protein_id=YP_855051.1;transl_table=11
NC_008570.1	RefSeq	gene	552789	553331	.	+	.	ID=gene519;Dbxref=GeneID:4487011;Name=AHA_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0519
NC_008570.1	RefSeq	CDS	552789	553331	.	+	0	ID=cds494;Parent=gene519;Dbxref=Genbank:YP_855052.1,GeneID:4487011;Name=YP_855052.1;Note=identified by match to protein family HMM PF00419;gbkey=CDS;product=fimbrial protein;protein_id=YP_855052.1;transl_table=11
NC_008570.1	RefSeq	gene	553413	553820	.	+	.	ID=gene520;Dbxref=GeneID:4487012;Name=AHA_0520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0520
NC_008570.1	RefSeq	CDS	553413	553820	.	+	0	ID=cds495;Parent=gene520;Dbxref=Genbank:YP_855053.1,GeneID:4487012;Name=YP_855053.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855053.1;transl_table=11
NC_008570.1	RefSeq	gene	553888	556422	.	+	.	ID=gene521;Dbxref=GeneID:4487013;Name=AHA_0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0521
NC_008570.1	RefSeq	CDS	553888	556422	.	+	0	ID=cds496;Parent=gene521;Dbxref=Genbank:YP_855054.1,GeneID:4487013;Name=YP_855054.1;Note=identified by match to protein family HMM PF00577;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_855054.1;transl_table=11
NC_008570.1	RefSeq	gene	556433	557164	.	+	.	ID=gene522;Dbxref=GeneID:4487014;Name=AHA_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0522
NC_008570.1	RefSeq	CDS	556433	557164	.	+	0	ID=cds497;Parent=gene522;Dbxref=Genbank:YP_855055.1,GeneID:4487014;Name=YP_855055.1;Note=identified by match to protein family HMM PF00345%3B match to protein family HMM PF02753;gbkey=CDS;product=fimbrial chaperone protein;protein_id=YP_855055.1;transl_table=11
NC_008570.1	RefSeq	gene	557169	558203	.	+	.	ID=gene523;Dbxref=GeneID:4487015;Name=AHA_0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0523
NC_008570.1	RefSeq	CDS	557169	558203	.	+	0	ID=cds498;Parent=gene523;Dbxref=Genbank:YP_855056.1,GeneID:4487015;Name=YP_855056.1;Note=identified by similarity to GB:AAV78666.1;gbkey=CDS;product=fimbrial protein;protein_id=YP_855056.1;transl_table=11
NC_008570.1	RefSeq	gene	558215	558766	.	+	.	ID=gene524;Dbxref=GeneID:4487016;Name=AHA_0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0524
NC_008570.1	RefSeq	CDS	558215	558766	.	+	0	ID=cds499;Parent=gene524;Dbxref=Genbank:YP_855057.1,GeneID:4487016;Name=YP_855057.1;Note=identified by match to protein family HMM PF00419;gbkey=CDS;product=fimbrial protein;protein_id=YP_855057.1;transl_table=11
NC_008570.1	RefSeq	gene	558769	559452	.	-	.	ID=gene525;Dbxref=GeneID:4488865;Name=AHA_0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0525
NC_008570.1	RefSeq	CDS	558769	559452	.	-	0	ID=cds500;Parent=gene525;Dbxref=Genbank:YP_855058.1,GeneID:4488865;Name=YP_855058.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855058.1;transl_table=11
NC_008570.1	RefSeq	gene	559449	560009	.	-	.	ID=gene526;Dbxref=GeneID:4488866;Name=AHA_0526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0526
NC_008570.1	RefSeq	CDS	559449	560009	.	-	0	ID=cds501;Parent=gene526;Dbxref=Genbank:YP_855059.1,GeneID:4488866;Name=YP_855059.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein%2C C terminal;protein_id=YP_855059.1;transl_table=11
NC_008570.1	RefSeq	gene	560311	561717	.	-	.	ID=gene527;Dbxref=GeneID:4488867;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AHA_0527
NC_008570.1	RefSeq	CDS	560311	561717	.	-	0	ID=cds502;Parent=gene527;Dbxref=Genbank:YP_855060.1,GeneID:4488867;Name=YP_855060.1;Note=identified by similarity to SP:P37353%3B match to protein family HMM PF00501%3B match to protein family HMM TIGR01923;gbkey=CDS;gene=menE;product=o-succinylbenzoate--CoA ligase;protein_id=YP_855060.1;transl_table=11
NC_008570.1	RefSeq	gene	561728	562657	.	-	.	ID=gene528;Dbxref=GeneID:4488868;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AHA_0528
NC_008570.1	RefSeq	CDS	561728	562657	.	-	0	ID=cds503;Parent=gene528;Dbxref=Genbank:YP_855061.1,GeneID:4488868;Name=YP_855061.1;Note=identified by match to protein family HMM TIGR01927;gbkey=CDS;gene=menC;product=o-succinylbenzoic acid (OSB) synthetase;protein_id=YP_855061.1;transl_table=11
NC_008570.1	RefSeq	gene	562657	563517	.	-	.	ID=gene529;Dbxref=GeneID:4488869;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AHA_0529
NC_008570.1	RefSeq	CDS	562657	563517	.	-	0	ID=cds504;Parent=gene529;Dbxref=Genbank:YP_855062.1,GeneID:4488869;Name=YP_855062.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;gene=menB;product=naphthoate synthase;protein_id=YP_855062.1;transl_table=11
NC_008570.1	RefSeq	gene	563510	564280	.	-	.	ID=gene530;Dbxref=GeneID:4488870;Name=AHA_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0530
NC_008570.1	RefSeq	CDS	563510	564280	.	-	0	ID=cds505;Parent=gene530;Dbxref=Genbank:YP_855063.1,GeneID:4488870;Name=YP_855063.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_855063.1;transl_table=11
NC_008570.1	RefSeq	gene	564270	566000	.	-	.	ID=gene531;Dbxref=GeneID:4488871;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AHA_0531
NC_008570.1	RefSeq	CDS	564270	566000	.	-	0	ID=cds506;Parent=gene531;Dbxref=Genbank:YP_855064.1,GeneID:4488871;Name=YP_855064.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;gene=menD;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=YP_855064.1;transl_table=11
NC_008570.1	RefSeq	gene	566035	567381	.	-	.	ID=gene532;Dbxref=GeneID:4488872;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AHA_0532
NC_008570.1	RefSeq	CDS	566035	567381	.	-	0	ID=cds507;Parent=gene532;Dbxref=Genbank:YP_855065.1,GeneID:4488872;Name=YP_855065.1;Note=identified by similarity to SP:P38051%3B match to protein family HMM PF00425%3B match to protein family HMM TIGR00543;gbkey=CDS;gene=menF;product=menaquinone-specific isochorismate synthase;protein_id=YP_855065.1;transl_table=11
NC_008570.1	RefSeq	gene	567571	568494	.	+	.	ID=gene533;Dbxref=GeneID:4488873;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AHA_0533
NC_008570.1	RefSeq	CDS	567571	568494	.	+	0	ID=cds508;Parent=gene533;Dbxref=Genbank:YP_855066.1,GeneID:4488873;Name=YP_855066.1;Note=identified by similarity to SP:P32166%3B match to protein family HMM PF01040%3B match to protein family HMM TIGR00751;gbkey=CDS;gene=menA;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=YP_855066.1;transl_table=11
NC_008570.1	RefSeq	gene	568547	568816	.	+	.	ID=gene534;Dbxref=GeneID:4488874;Name=AHA_0534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0534
NC_008570.1	RefSeq	CDS	568547	568816	.	+	0	ID=cds509;Parent=gene534;Dbxref=Genbank:YP_855067.1,GeneID:4488874;Name=YP_855067.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855067.1;transl_table=11
NC_008570.1	RefSeq	gene	568896	570293	.	-	.	ID=gene535;Dbxref=GeneID:4488875;Name=AHA_0535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0535
NC_008570.1	RefSeq	CDS	568896	570293	.	-	0	ID=cds510;Parent=gene535;Dbxref=Genbank:YP_855068.1,GeneID:4488875;Name=YP_855068.1;Note=identified by match to protein family HMM PF03413%3B match to protein family HMM PF03929;gbkey=CDS;product=propeptide%2C PepSY amd peptidase M4:PepSY-associated TM helix;protein_id=YP_855068.1;transl_table=11
NC_008570.1	RefSeq	gene	570566	570961	.	+	.	ID=gene536;Dbxref=GeneID:4488876;Name=AHA_0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0536
NC_008570.1	RefSeq	CDS	570566	570961	.	+	0	ID=cds511;Parent=gene536;Dbxref=Genbank:YP_855069.1,GeneID:4488876;Name=YP_855069.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855069.1;transl_table=11
NC_008570.1	RefSeq	gene	571145	571435	.	-	.	ID=gene537;Dbxref=GeneID:4488877;Name=AHA_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0537
NC_008570.1	RefSeq	CDS	571145	571435	.	-	0	ID=cds512;Parent=gene537;Dbxref=Genbank:YP_855070.1,GeneID:4488877;Name=YP_855070.1;Note=identified by match to protein family HMM PF03692;gbkey=CDS;product=hypothetical protein;protein_id=YP_855070.1;transl_table=11
NC_008570.1	RefSeq	gene	571508	572884	.	-	.	ID=gene538;Dbxref=GeneID:4488878;Name=AHA_0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0538
NC_008570.1	RefSeq	CDS	571508	572884	.	-	0	ID=cds513;Parent=gene538;Dbxref=Genbank:YP_855071.1,GeneID:4488878;Name=YP_855071.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF03880;gbkey=CDS;product=ATP-independent RNA helicase DbpA;protein_id=YP_855071.1;transl_table=11
NC_008570.1	RefSeq	gene	573287	574654	.	+	.	ID=gene539;Dbxref=GeneID:4488879;Name=AHA_0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0539
NC_008570.1	RefSeq	CDS	573287	574654	.	+	0	ID=cds514;Parent=gene539;Dbxref=Genbank:YP_855072.1,GeneID:4488879;Name=YP_855072.1;Note=identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670;gbkey=CDS;product=nucleoside permease NupC;protein_id=YP_855072.1;transl_table=11
NC_008570.1	RefSeq	gene	574747	575247	.	-	.	ID=gene540;Dbxref=GeneID:4488880;Name=AHA_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0540
NC_008570.1	RefSeq	CDS	574747	575247	.	-	0	ID=cds515;Parent=gene540;Dbxref=Genbank:YP_855073.1,GeneID:4488880;Name=YP_855073.1;Note=identified by match to protein family HMM PF04307;gbkey=CDS;product=hydrolase;protein_id=YP_855073.1;transl_table=11
NC_008570.1	RefSeq	gene	575340	575894	.	-	.	ID=gene541;Dbxref=GeneID:4488881;Name=AHA_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0541
NC_008570.1	RefSeq	CDS	575340	575894	.	-	0	ID=cds516;Parent=gene541;Dbxref=Genbank:YP_855074.1,GeneID:4488881;Name=YP_855074.1;Note=identified by match to protein family HMM PF01292;gbkey=CDS;product=cytochrome B;protein_id=YP_855074.1;transl_table=11
NC_008570.1	RefSeq	gene	575943	576212	.	-	.	ID=gene542;Dbxref=GeneID:4488882;Name=AHA_0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0542
NC_008570.1	RefSeq	CDS	575943	576212	.	-	0	ID=cds517;Parent=gene542;Dbxref=Genbank:YP_855075.1,GeneID:4488882;Name=YP_855075.1;Note=identified by similarity to GB:AAY38542.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855075.1;transl_table=11
NC_008570.1	RefSeq	gene	576334	576786	.	-	.	ID=gene543;Dbxref=GeneID:4488883;Name=AHA_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0543
NC_008570.1	RefSeq	CDS	576334	576786	.	-	0	ID=cds518;Parent=gene543;Dbxref=Genbank:YP_855076.1,GeneID:4488883;Name=YP_855076.1;Note=identified by match to protein family HMM PF02639;gbkey=CDS;product=YaiI/YqxD family protein;protein_id=YP_855076.1;transl_table=11
NC_008570.1	RefSeq	gene	576898	577884	.	+	.	ID=gene544;Dbxref=GeneID:4488884;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AHA_0544
NC_008570.1	RefSeq	CDS	576898	577884	.	+	0	ID=cds519;Parent=gene544;Dbxref=Genbank:YP_855077.1,GeneID:4488884;Name=YP_855077.1;Note=identified by match to protein family HMM PF01544;gbkey=CDS;gene=zntB;product=zinc transporter;protein_id=YP_855077.1;transl_table=11
NC_008570.1	RefSeq	gene	577894	578412	.	+	.	ID=gene545;Dbxref=GeneID:4488521;Name=AHA_0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0545
NC_008570.1	RefSeq	CDS	577894	578412	.	+	0	ID=cds520;Parent=gene545;Dbxref=Genbank:YP_855078.1,GeneID:4488521;Name=YP_855078.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855078.1;transl_table=11
NC_008570.1	RefSeq	gene	578455	578703	.	-	.	ID=gene546;Dbxref=GeneID:4488522;Name=AHA_0546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0546
NC_008570.1	RefSeq	CDS	578455	578703	.	-	0	ID=cds521;Parent=gene546;Dbxref=Genbank:YP_855079.1,GeneID:4488522;Name=YP_855079.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855079.1;transl_table=11
NC_008570.1	RefSeq	gene	578767	579342	.	-	.	ID=gene547;Dbxref=GeneID:4488523;Name=AHA_0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0547
NC_008570.1	RefSeq	CDS	578767	579342	.	-	0	ID=cds522;Parent=gene547;Dbxref=Genbank:YP_855080.1,GeneID:4488523;Name=YP_855080.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=molecular chaperone;protein_id=YP_855080.1;transl_table=11
NC_008570.1	RefSeq	gene	579339	581294	.	-	.	ID=gene548;Dbxref=GeneID:4488524;Name=AHA_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0548
NC_008570.1	RefSeq	CDS	579339	581294	.	-	0	ID=cds523;Parent=gene548;Dbxref=Genbank:YP_855081.1,GeneID:4488524;Name=YP_855081.1;Note=identified by match to protein family HMM PF00999;gbkey=CDS;product=sodium/hydrogen exchanger family protein;protein_id=YP_855081.1;transl_table=11
NC_008570.1	RefSeq	gene	581303	581824	.	-	.	ID=gene549;Dbxref=GeneID:4488525;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AHA_0549
NC_008570.1	RefSeq	CDS	581303	581824	.	-	0	ID=cds524;Parent=gene549;Dbxref=Genbank:YP_855082.1,GeneID:4488525;Name=YP_855082.1;Note=Acts as a repressor of the mtlAD operon;gbkey=CDS;gene=mtlR;product=mannitol repressor protein;protein_id=YP_855082.1;transl_table=11
NC_008570.1	RefSeq	gene	581933	583201	.	-	.	ID=gene550;Dbxref=GeneID:4488526;Name=AHA_0550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0550
NC_008570.1	RefSeq	CDS	581933	583201	.	-	0	ID=cds525;Parent=gene550;Dbxref=Genbank:YP_855083.1,GeneID:4488526;Name=YP_855083.1;Note=identified by match to protein family HMM PF01232%3B match to protein family HMM PF08125;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=YP_855083.1;transl_table=11
NC_008570.1	RefSeq	gene	583116	585038	.	-	.	ID=gene551;Dbxref=GeneID:4488527;Name=AHA_0551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0551
NC_008570.1	RefSeq	CDS	583116	585038	.	-	0	ID=cds526;Parent=gene551;Dbxref=Genbank:YP_855084.1,GeneID:4488527;Name=YP_855084.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF02302%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00851;gbkey=CDS;product=pts system mannitol-specific eiicba component (eiicba-mtl) (eii-mtl);protein_id=YP_855084.1;transl_table=11
NC_008570.1	RefSeq	gene	585493	586539	.	-	.	ID=gene552;Dbxref=GeneID:4488528;Name=AHA_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0552
NC_008570.1	RefSeq	CDS	585493	586539	.	-	0	ID=cds527;Parent=gene552;Dbxref=Genbank:YP_855085.1,GeneID:4488528;Name=YP_855085.1;gbkey=CDS;product=transporter;protein_id=YP_855085.1;transl_table=11
NC_008570.1	RefSeq	gene	586561	587286	.	-	.	ID=gene553;Dbxref=GeneID:4488529;Name=AHA_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0553
NC_008570.1	RefSeq	CDS	586561	587286	.	-	0	ID=cds528;Parent=gene553;Dbxref=Genbank:YP_855086.1,GeneID:4488529;Name=YP_855086.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_855086.1;transl_table=11
NC_008570.1	RefSeq	gene	587343	589364	.	-	.	ID=gene554;Dbxref=GeneID:4488530;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AHA_0554
NC_008570.1	RefSeq	CDS	587343	589364	.	-	0	ID=cds529;Parent=gene554;Dbxref=Genbank:YP_855087.1,GeneID:4488530;Name=YP_855087.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;gene=rnb;product=exoribonuclease II;protein_id=YP_855087.1;transl_table=11
NC_008570.1	RefSeq	gene	589465	590364	.	-	.	ID=gene555;Dbxref=GeneID:4488531;Name=AHA_0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0555
NC_008570.1	RefSeq	CDS	589465	590364	.	-	0	ID=cds530;Parent=gene555;Dbxref=Genbank:YP_855088.1,GeneID:4488531;Name=YP_855088.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome replication initiation inhibitor protein;protein_id=YP_855088.1;transl_table=11
NC_008570.1	RefSeq	gene	590632	591255	.	-	.	ID=gene556;Dbxref=GeneID:4488532;Name=AHA_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0556
NC_008570.1	RefSeq	CDS	590632	591255	.	-	0	ID=cds531;Parent=gene556;Dbxref=Genbank:YP_855089.1,GeneID:4488532;Name=YP_855089.1;Note=identified by match to protein family HMM PF00765;gbkey=CDS;product=autoinducer synthesis protein AhyI;protein_id=YP_855089.1;transl_table=11
NC_008570.1	RefSeq	gene	591318	592103	.	+	.	ID=gene557;Dbxref=GeneID:4488533;Name=ahyR;gbkey=Gene;gene=ahyR;gene_biotype=protein_coding;locus_tag=AHA_0557
NC_008570.1	RefSeq	CDS	591318	592103	.	+	0	ID=cds532;Parent=gene557;Dbxref=Genbank:YP_855090.1,GeneID:4488533;Name=YP_855090.1;Note=identified by similarity to SP:P0A3J6%3B match to protein family HMM PF00196%3B match to protein family HMM PF03472%3B match to protein family HMM PF04967;gbkey=CDS;gene=ahyR;product=transcriptional activator protein AhyR;protein_id=YP_855090.1;transl_table=11
NC_008570.1	RefSeq	gene	592316	592936	.	+	.	ID=gene558;Dbxref=GeneID:4488534;Name=AHA_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0558
NC_008570.1	RefSeq	CDS	592316	592936	.	+	0	ID=cds533;Parent=gene558;Dbxref=Genbank:YP_855091.1,GeneID:4488534;Name=YP_855091.1;Note=identified by match to protein family HMM PF01810%3B match to protein family HMM TIGR00948;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=YP_855091.1;transl_table=11
NC_008570.1	RefSeq	gene	593051	595042	.	+	.	ID=gene559;Dbxref=GeneID:4488535;Name=AHA_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0559
NC_008570.1	RefSeq	CDS	593051	595042	.	+	0	ID=cds534;Parent=gene559;Dbxref=Genbank:YP_855092.1,GeneID:4488535;Name=YP_855092.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=YP_855092.1;transl_table=11
NC_008570.1	RefSeq	gene	595108	595584	.	-	.	ID=gene560;Dbxref=GeneID:4488536;Name=AHA_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0560
NC_008570.1	RefSeq	CDS	595108	595584	.	-	0	ID=cds535;Parent=gene560;Dbxref=Genbank:YP_855093.1,GeneID:4488536;Name=YP_855093.1;Note=identified by match to protein family HMM PF05433;gbkey=CDS;product=surface antigen family protein;protein_id=YP_855093.1;transl_table=11
NC_008570.1	RefSeq	gene	595722	596174	.	-	.	ID=gene561;Dbxref=GeneID:4488537;Name=AHA_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0561
NC_008570.1	RefSeq	CDS	595722	596174	.	-	0	ID=cds536;Parent=gene561;Dbxref=Genbank:YP_855094.1,GeneID:4488537;Name=YP_855094.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855094.1;transl_table=11
NC_008570.1	RefSeq	gene	596295	596750	.	-	.	ID=gene562;Dbxref=GeneID:4488538;Name=AHA_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0562
NC_008570.1	RefSeq	CDS	596295	596750	.	-	0	ID=cds537;Parent=gene562;Dbxref=Genbank:YP_855095.1,GeneID:4488538;Name=YP_855095.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855095.1;transl_table=11
NC_008570.1	RefSeq	gene	596803	598605	.	-	.	ID=gene563;Dbxref=GeneID:4488539;Name=AHA_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0563
NC_008570.1	RefSeq	CDS	596803	598605	.	-	0	ID=cds538;Parent=gene563;Dbxref=Genbank:YP_855096.1,GeneID:4488539;Name=YP_855096.1;Note=identified by match to protein family HMM PF00557;gbkey=CDS;product=aminopeptidase;protein_id=YP_855096.1;transl_table=11
NC_008570.1	RefSeq	gene	598639	599304	.	-	.	ID=gene564;Dbxref=GeneID:4489386;Name=AHA_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0564
NC_008570.1	RefSeq	CDS	598639	599304	.	-	0	ID=cds539;Parent=gene564;Dbxref=Genbank:YP_855097.1,GeneID:4489386;Name=YP_855097.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_855097.1;transl_table=11
NC_008570.1	RefSeq	gene	599480	601105	.	-	.	ID=gene565;Dbxref=GeneID:4489387;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AHA_0565
NC_008570.1	RefSeq	CDS	599480	601105	.	-	0	ID=cds540;Parent=gene565;Dbxref=Genbank:YP_855098.1,GeneID:4489387;Name=YP_855098.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;gene=pckA;product=phosphoenolpyruvate carboxykinase;protein_id=YP_855098.1;transl_table=11
NC_008570.1	RefSeq	gene	601255	602142	.	-	.	ID=gene566;Dbxref=GeneID:4489388;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AHA_0566
NC_008570.1	RefSeq	CDS	601255	602142	.	-	0	ID=cds541;Parent=gene566;Dbxref=Genbank:YP_855099.1,GeneID:4489388;Name=YP_855099.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=Hsp33-like chaperonin;protein_id=YP_855099.1;transl_table=11
NC_008570.1	RefSeq	gene	602248	602838	.	-	.	ID=gene567;Dbxref=GeneID:4489389;Name=AHA_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0567
NC_008570.1	RefSeq	CDS	602248	602838	.	-	0	ID=cds542;Parent=gene567;Dbxref=Genbank:YP_855100.1,GeneID:4489389;Name=YP_855100.1;Note=identified by match to protein family HMM PF01479;gbkey=CDS;product=heat shock protein 15;protein_id=YP_855100.1;transl_table=11
NC_008570.1	RefSeq	gene	602786	603709	.	+	.	ID=gene568;Dbxref=GeneID:4489390;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AHA_0568
NC_008570.1	RefSeq	CDS	602786	603709	.	+	0	ID=cds543;Parent=gene568;Dbxref=Genbank:YP_855101.1,GeneID:4489390;Name=YP_855101.1;Note=identified by similarity to GB:AAA58784.1%3B match to protein family HMM TIGR01713;gbkey=CDS;gene=gspC;product=general secretion pathway protein C;protein_id=YP_855101.1;transl_table=11
NC_008570.1	RefSeq	gene	603731	605764	.	+	.	ID=gene569;Dbxref=GeneID:4489391;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AHA_0569
NC_008570.1	RefSeq	CDS	603731	605764	.	+	0	ID=cds544;Parent=gene569;Dbxref=Genbank:YP_855102.1,GeneID:4489391;Name=YP_855102.1;Note=identified by similarity to SP:P45758%3B match to protein family HMM PF00263%3B match to protein family HMM PF03958%3B match to protein family HMM TIGR02517;gbkey=CDS;gene=gspD;product=general secretion pathway protein D;protein_id=YP_855102.1;transl_table=11
NC_008570.1	RefSeq	gene	605764	607269	.	+	.	ID=gene570;Dbxref=GeneID:4489392;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AHA_0570
NC_008570.1	RefSeq	CDS	605764	607269	.	+	0	ID=cds545;Parent=gene570;Dbxref=Genbank:YP_855103.1,GeneID:4489392;Name=YP_855103.1;Note=identified by similarity to SP:P31741%3B match to protein family HMM PF00437%3B match to protein family HMM TIGR02533;gbkey=CDS;gene=gspE;product=general secretory pathway protein E;protein_id=YP_855103.1;transl_table=11
NC_008570.1	RefSeq	gene	607271	608491	.	+	.	ID=gene571;Dbxref=GeneID:4489393;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AHA_0571
NC_008570.1	RefSeq	CDS	607271	608491	.	+	0	ID=cds546;Parent=gene571;Dbxref=Genbank:YP_855104.1,GeneID:4489393;Name=YP_855104.1;Note=identified by match to protein family HMM PF00482%3B match to protein family HMM TIGR02120;gbkey=CDS;gene=gspF;product=general secretion pathway protein F;protein_id=YP_855104.1;transl_table=11
NC_008570.1	RefSeq	gene	608607	609038	.	+	.	ID=gene572;Dbxref=GeneID:4489394;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AHA_0572
NC_008570.1	RefSeq	CDS	608607	609038	.	+	0	ID=cds547;Parent=gene572;Dbxref=Genbank:YP_855105.1,GeneID:4489394;Name=YP_855105.1;Note=identified by similarity to SP:P31733%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR01710%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=gspG;product=general secretion pathway protein G;protein_id=YP_855105.1;transl_table=11
NC_008570.1	RefSeq	gene	609202	609753	.	+	.	ID=gene573;Dbxref=GeneID:4489395;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AHA_0573
NC_008570.1	RefSeq	CDS	609202	609753	.	+	0	ID=cds548;Parent=gene573;Dbxref=Genbank:YP_855106.1,GeneID:4489395;Name=YP_855106.1;Note=identified by similarity to SP:P31735%3B match to protein family HMM TIGR01708%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=gspH;product=general secretion pathway protein H;protein_id=YP_855106.1;transl_table=11
NC_008570.1	RefSeq	gene	609750	610109	.	+	.	ID=gene574;Dbxref=GeneID:4489396;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AHA_0574
NC_008570.1	RefSeq	CDS	609750	610109	.	+	0	ID=cds549;Parent=gene574;Dbxref=Genbank:YP_855107.1,GeneID:4489396;Name=YP_855107.1;Note=identified by similarity to SP:P31737%3B match to protein family HMM PF02501%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR01707%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=gspI;product=general secretion pathway protein I;protein_id=YP_855107.1;transl_table=11
NC_008570.1	RefSeq	gene	610178	610807	.	+	.	ID=gene575;Dbxref=GeneID:4489397;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AHA_0575
NC_008570.1	RefSeq	CDS	610178	610807	.	+	0	ID=cds550;Parent=gene575;Dbxref=Genbank:YP_855108.1,GeneID:4489397;Name=YP_855108.1;Note=identified by similarity to SP:P31739%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR01711%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=gspJ;product=general secretion pathway protein J;protein_id=YP_855108.1;transl_table=11
NC_008570.1	RefSeq	gene	610897	611922	.	+	.	ID=gene576;Dbxref=GeneID:4489398;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AHA_0576
NC_008570.1	RefSeq	CDS	610897	611922	.	+	0	ID=cds551;Parent=gene576;Dbxref=Genbank:YP_855109.1,GeneID:4489398;Name=YP_855109.1;Note=identified by similarity to SP:P31760%3B match to protein family HMM PF03934;gbkey=CDS;gene=gspK;product=general secretion pathway protein K;protein_id=YP_855109.1;transl_table=11
NC_008570.1	RefSeq	gene	612042	613226	.	+	.	ID=gene577;Dbxref=GeneID:4489399;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AHA_0577
NC_008570.1	RefSeq	CDS	612042	613226	.	+	0	ID=cds552;Parent=gene577;Dbxref=Genbank:YP_855110.1,GeneID:4489399;Name=YP_855110.1;Note=identified by match to protein family HMM PF05134%3B match to protein family HMM TIGR01709;gbkey=CDS;gene=gspL;product=general secretion pathway protein L;protein_id=YP_855110.1;transl_table=11
NC_008570.1	RefSeq	gene	613223	613714	.	+	.	ID=gene578;Dbxref=GeneID:4489400;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AHA_0578
NC_008570.1	RefSeq	CDS	613223	613714	.	+	0	ID=cds553;Parent=gene578;Dbxref=Genbank:YP_855111.1,GeneID:4489400;Name=YP_855111.1;Note=identified by similarity to SP:P41850%3B match to protein family HMM PF04612;gbkey=CDS;gene=gspM;product=general secretion pathway protein M;protein_id=YP_855111.1;transl_table=11
NC_008570.1	RefSeq	gene	613776	614531	.	+	.	ID=gene579;Dbxref=GeneID:4489401;Name=gspN;gbkey=Gene;gene=gspN;gene_biotype=protein_coding;locus_tag=AHA_0579
NC_008570.1	RefSeq	CDS	613776	614531	.	+	0	ID=cds554;Parent=gene579;Dbxref=Genbank:YP_855112.1,GeneID:4489401;Name=YP_855112.1;Note=identified by match to protein family HMM PF01203;gbkey=CDS;gene=gspN;product=type II secretion system protein N;protein_id=YP_855112.1;transl_table=11
NC_008570.1	RefSeq	gene	614592	615503	.	-	.	ID=gene580;Dbxref=GeneID:4489402;Name=AHA_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0580
NC_008570.1	RefSeq	CDS	614592	615503	.	-	0	ID=cds555;Parent=gene580;Dbxref=Genbank:YP_855113.1,GeneID:4489402;Name=YP_855113.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_855113.1;transl_table=11
NC_008570.1	RefSeq	gene	615563	616831	.	+	.	ID=gene581;Dbxref=GeneID:4489403;Name=tyrS-1;gbkey=Gene;gene=tyrS-1;gene_biotype=protein_coding;locus_tag=AHA_0581
NC_008570.1	RefSeq	CDS	615563	616831	.	+	0	ID=cds556;Parent=gene581;Dbxref=Genbank:YP_855114.1,GeneID:4489403;Name=YP_855114.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;gene=tyrS-1;product=tyrosyl-tRNA synthetase;protein_id=YP_855114.1;transl_table=11
NC_008570.1	RefSeq	gene	616925	617593	.	-	.	ID=gene582;Dbxref=GeneID:4489404;Name=AHA_0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0582
NC_008570.1	RefSeq	CDS	616925	617593	.	-	0	ID=cds557;Parent=gene582;Dbxref=Genbank:YP_855115.1,GeneID:4489404;Name=YP_855115.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=HAD family hydrolase;protein_id=YP_855115.1;transl_table=11
NC_008570.1	RefSeq	gene	617780	618340	.	+	.	ID=gene583;Dbxref=GeneID:4489405;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AHA_0583
NC_008570.1	RefSeq	CDS	617780	618340	.	+	0	ID=cds558;Parent=gene583;Dbxref=Genbank:YP_855116.1,GeneID:4489405;Name=YP_855116.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase NudE;protein_id=YP_855116.1;transl_table=11
NC_008570.1	RefSeq	gene	618378	619190	.	+	.	ID=gene584;Dbxref=GeneID:4489251;Name=cysQ-1;gbkey=Gene;gene=cysQ-1;gene_biotype=protein_coding;locus_tag=AHA_0584
NC_008570.1	RefSeq	CDS	618378	619190	.	+	0	ID=cds559;Parent=gene584;Dbxref=Genbank:YP_855117.1,GeneID:4489251;Name=YP_855117.1;Note=identified by match to protein family HMM PF00459%3B match to protein family HMM TIGR01331;gbkey=CDS;gene=cysQ-1;product=3'(2')%2C5'-bisphosphate nucleotidase;protein_id=YP_855117.1;transl_table=11
NC_008570.1	RefSeq	gene	619602	620873	.	+	.	ID=gene585;Dbxref=GeneID:4489252;Name=AHA_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0585
NC_008570.1	RefSeq	CDS	619602	620873	.	+	0	ID=cds560;Parent=gene585;Dbxref=Genbank:YP_855118.1,GeneID:4489252;Name=YP_855118.1;Note=identified by match to protein family HMM PF01490;gbkey=CDS;product=serine transporter;protein_id=YP_855118.1;transl_table=11
NC_008570.1	RefSeq	gene	620947	621285	.	-	.	ID=gene586;Dbxref=GeneID:4489253;Name=AHA_0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0586
NC_008570.1	RefSeq	CDS	620947	621285	.	-	0	ID=cds561;Parent=gene586;Dbxref=Genbank:YP_855119.1,GeneID:4489253;Name=YP_855119.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM TIGR02222;gbkey=CDS;product=protein CsaA;protein_id=YP_855119.1;transl_table=11
NC_008570.1	RefSeq	gene	621370	622122	.	-	.	ID=gene587;Dbxref=GeneID:4489254;Name=AHA_0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0587
NC_008570.1	RefSeq	CDS	621370	622122	.	-	0	ID=cds562;Parent=gene587;Dbxref=Genbank:YP_855120.1,GeneID:4489254;Name=YP_855120.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_855120.1;transl_table=11
NC_008570.1	RefSeq	gene	622158	622481	.	-	.	ID=gene588;Dbxref=GeneID:4489255;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AHA_0588
NC_008570.1	RefSeq	CDS	622158	622481	.	-	0	ID=cds563;Parent=gene588;Dbxref=Genbank:YP_855121.1,GeneID:4489255;Name=YP_855121.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;gene=metJ;product=transcriptional repressor protein MetJ;protein_id=YP_855121.1;transl_table=11
NC_008570.1	RefSeq	gene	622690	623853	.	+	.	ID=gene589;Dbxref=GeneID:4489256;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AHA_0589
NC_008570.1	RefSeq	CDS	622690	623853	.	+	0	ID=cds564;Parent=gene589;Dbxref=Genbank:YP_855122.1,GeneID:4489256;Name=YP_855122.1;Note=identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR02080;gbkey=CDS;gene=metB;product=O-succinylhomoserine (thiol)-lyase;protein_id=YP_855122.1;transl_table=11
NC_008570.1	RefSeq	gene	623853	626321	.	+	.	ID=gene590;Dbxref=GeneID:4489257;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=AHA_0590
NC_008570.1	RefSeq	CDS	623853	626321	.	+	0	ID=cds565;Parent=gene590;Dbxref=Genbank:YP_855123.1,GeneID:4489257;Name=YP_855123.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=YP_855123.1;transl_table=11
NC_008570.1	RefSeq	gene	626974	629607	.	-	.	ID=gene591;Dbxref=GeneID:4489258;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AHA_0591
NC_008570.1	RefSeq	CDS	626974	629607	.	-	0	ID=cds566;Parent=gene591;Dbxref=Genbank:YP_855124.1,GeneID:4489258;Name=YP_855124.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=YP_855124.1;transl_table=11
NC_008570.1	RefSeq	gene	629823	630968	.	-	.	ID=gene592;Dbxref=GeneID:4489259;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AHA_0592
NC_008570.1	RefSeq	CDS	629823	630968	.	-	0	ID=cds567;Parent=gene592;Dbxref=Genbank:YP_855125.1,GeneID:4489259;Name=YP_855125.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;gene=argE;product=acetylornithine deacetylase;protein_id=YP_855125.1;transl_table=11
NC_008570.1	RefSeq	gene	631237	632244	.	+	.	ID=gene593;Dbxref=GeneID:4489260;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AHA_0593
NC_008570.1	RefSeq	CDS	631237	632244	.	+	0	ID=cds568;Parent=gene593;Dbxref=Genbank:YP_855126.1,GeneID:4489260;Name=YP_855126.1;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_855126.1;transl_table=11
NC_008570.1	RefSeq	gene	632268	633047	.	+	.	ID=gene594;Dbxref=GeneID:4489261;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AHA_0594
NC_008570.1	RefSeq	CDS	632268	633047	.	+	0	ID=cds569;Parent=gene594;Dbxref=Genbank:YP_855127.1,GeneID:4489261;Name=YP_855127.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=YP_855127.1;transl_table=11
NC_008570.1	RefSeq	gene	632968	633984	.	+	.	ID=gene595;Dbxref=GeneID:4489262;Name=argF-1;gbkey=Gene;gene=argF-1;gene_biotype=protein_coding;locus_tag=AHA_0595
NC_008570.1	RefSeq	CDS	632968	633984	.	+	0	ID=cds570;Parent=gene595;Dbxref=Genbank:YP_855128.1,GeneID:4489262;Name=YP_855128.1;Note=catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation;gbkey=CDS;gene=argF-1;product=ornithine carbamoyltransferase;protein_id=YP_855128.1;transl_table=11
NC_008570.1	RefSeq	gene	634039	635274	.	+	.	ID=gene596;Dbxref=GeneID:4489263;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AHA_0596
NC_008570.1	RefSeq	CDS	634039	635274	.	+	0	ID=cds571;Parent=gene596;Dbxref=Genbank:YP_855129.1,GeneID:4489263;Name=YP_855129.1;Note=catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis%2C AMP-forming;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=YP_855129.1;transl_table=11
NC_008570.1	RefSeq	gene	635484	636869	.	+	.	ID=gene597;Dbxref=GeneID:4489264;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AHA_0597
NC_008570.1	RefSeq	CDS	635484	636869	.	+	0	ID=cds572;Parent=gene597;Dbxref=Genbank:YP_855130.1,GeneID:4489264;Name=YP_855130.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=YP_855130.1;transl_table=11
NC_008570.1	RefSeq	gene	636990	637547	.	-	.	ID=gene598;Dbxref=GeneID:4489265;Name=AHA_0598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0598
NC_008570.1	RefSeq	CDS	636990	637547	.	-	0	ID=cds573;Parent=gene598;Dbxref=Genbank:YP_855131.1,GeneID:4489265;Name=YP_855131.1;Note=identified by match to protein family HMM PF06114;gbkey=CDS;product=hypothetical protein;protein_id=YP_855131.1;transl_table=11
NC_008570.1	RefSeq	gene	638445	638906	.	-	.	ID=gene599;Dbxref=GeneID:4489266;Name=AHA_0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0599
NC_008570.1	RefSeq	CDS	638445	638906	.	-	0	ID=cds574;Parent=gene599;Dbxref=Genbank:YP_855133.1,GeneID:4489266;Name=YP_855133.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855133.1;transl_table=11
NC_008570.1	RefSeq	gene	639107	639379	.	-	.	ID=gene600;Dbxref=GeneID:4489267;Name=AHA_0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0600
NC_008570.1	RefSeq	CDS	639107	639379	.	-	0	ID=cds575;Parent=gene600;Dbxref=Genbank:YP_855134.1,GeneID:4489267;Name=YP_855134.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855134.1;transl_table=11
NC_008570.1	RefSeq	gene	639428	639769	.	-	.	ID=gene601;Dbxref=GeneID:4489268;Name=AHA_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0601
NC_008570.1	RefSeq	CDS	639428	639769	.	-	0	ID=cds576;Parent=gene601;Dbxref=Genbank:YP_855136.1,GeneID:4489268;Name=YP_855136.1;Note=identified by match to protein family HMM PF06961;gbkey=CDS;product=integral membrane protein;protein_id=YP_855136.1;transl_table=11
NC_008570.1	RefSeq	gene	639766	640356	.	-	.	ID=gene602;Dbxref=GeneID:4489269;Name=AHA_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0602
NC_008570.1	RefSeq	CDS	639766	640356	.	-	0	ID=cds577;Parent=gene602;Dbxref=Genbank:YP_855138.1,GeneID:4489269;Name=YP_855138.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=maltose O-acetyltransferase;protein_id=YP_855138.1;transl_table=11
NC_008570.1	RefSeq	gene	640437	641699	.	-	.	ID=gene603;Dbxref=GeneID:4490150;Name=AHA_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0603
NC_008570.1	RefSeq	CDS	640437	641699	.	-	0	ID=cds578;Parent=gene603;Dbxref=Genbank:YP_855139.1,GeneID:4490150;Name=YP_855139.1;gbkey=CDS;product=MgtC/SapB transporter;protein_id=YP_855139.1;transl_table=11
NC_008570.1	RefSeq	gene	641909	642910	.	+	.	ID=gene604;Dbxref=GeneID:4490151;Name=AHA_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0604
NC_008570.1	RefSeq	CDS	641909	642910	.	+	0	ID=cds579;Parent=gene604;Dbxref=Genbank:YP_855142.1,GeneID:4490151;Name=YP_855142.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR00971;gbkey=CDS;product=sulfate-binding protein;protein_id=YP_855142.1;transl_table=11
NC_008570.1	RefSeq	gene	642967	643542	.	+	.	ID=gene605;Dbxref=GeneID:4490152;Name=AHA_0605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0605
NC_008570.1	RefSeq	CDS	642967	643542	.	+	0	ID=cds580;Parent=gene605;Dbxref=Genbank:YP_855143.1,GeneID:4490152;Name=YP_855143.1;Note=identified by match to protein family HMM PF06821;gbkey=CDS;product=hypothetical protein;protein_id=YP_855143.1;transl_table=11
NC_008570.1	RefSeq	gene	643795	644661	.	+	.	ID=gene606;Dbxref=GeneID:4490153;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AHA_0606
NC_008570.1	RefSeq	CDS	643795	644661	.	+	0	ID=cds581;Parent=gene606;Dbxref=Genbank:YP_855144.1,GeneID:4490153;Name=YP_855144.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00969%3B match to protein family HMM TIGR02139;gbkey=CDS;gene=cysT;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=YP_855144.1;transl_table=11
NC_008570.1	RefSeq	gene	644658	645554	.	+	.	ID=gene607;Dbxref=GeneID:4490154;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AHA_0607
NC_008570.1	RefSeq	CDS	644658	645554	.	+	0	ID=cds582;Parent=gene607;Dbxref=Genbank:YP_855146.1,GeneID:4490154;Name=YP_855146.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00969%3B match to protein family HMM TIGR02140;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=YP_855146.1;transl_table=11
NC_008570.1	RefSeq	gene	645577	646644	.	+	.	ID=gene608;Dbxref=GeneID:4490155;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AHA_0608
NC_008570.1	RefSeq	CDS	645577	646644	.	+	0	ID=cds583;Parent=gene608;Dbxref=Genbank:YP_855147.1,GeneID:4490155;Name=YP_855147.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM TIGR00968;gbkey=CDS;gene=cysA;product=sulfate/thiosulfate ABC transporter ATP-binding protein;protein_id=YP_855147.1;transl_table=11
NC_008570.1	RefSeq	gene	646821	647768	.	+	.	ID=gene609;Dbxref=GeneID:4490156;Name=AHA_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0609
NC_008570.1	RefSeq	CDS	646821	647768	.	+	0	ID=cds584;Parent=gene609;Dbxref=Genbank:YP_855148.1,GeneID:4490156;Name=YP_855148.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator CysB-like protein;protein_id=YP_855148.1;transl_table=11
NC_008570.1	RefSeq	gene	647841	649325	.	-	.	ID=gene610;Dbxref=GeneID:4490157;Name=AHA_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0610
NC_008570.1	RefSeq	CDS	647841	649325	.	-	0	ID=cds585;Parent=gene610;Dbxref=Genbank:YP_855149.1,GeneID:4490157;Name=YP_855149.1;Note=GbpA%3B plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium%3B in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin%2C glycoproteins and lipids on intestinal epithelial cells;gbkey=CDS;product=N-acetylglucosamine-binding protein A;protein_id=YP_855149.1;transl_table=11
NC_008570.1	RefSeq	gene	649679	651376	.	-	.	ID=gene611;Dbxref=GeneID:4490158;Name=AHA_0611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0611
NC_008570.1	RefSeq	CDS	649679	651376	.	-	0	ID=cds586;Parent=gene611;Dbxref=Genbank:YP_855150.1,GeneID:4490158;Name=YP_855150.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855150.1;transl_table=11
NC_008570.1	RefSeq	gene	651672	653519	.	+	.	ID=gene612;Dbxref=GeneID:4490159;Name=AHA_0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0612
NC_008570.1	RefSeq	CDS	651672	653519	.	+	0	ID=cds587;Parent=gene612;Dbxref=Genbank:YP_855151.1,GeneID:4490159;Name=YP_855151.1;Note=identified by match to protein family HMM PF01432;gbkey=CDS;product=oligoendopeptidase F;protein_id=YP_855151.1;transl_table=11
NC_008570.1	RefSeq	gene	653596	654387	.	+	.	ID=gene613;Dbxref=GeneID:4490160;Name=AHA_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0613
NC_008570.1	RefSeq	CDS	653596	654387	.	+	0	ID=cds588;Parent=gene613;Dbxref=Genbank:YP_855152.1,GeneID:4490160;Name=YP_855152.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855152.1;transl_table=11
NC_008570.1	RefSeq	gene	654401	656596	.	-	.	ID=gene614;Dbxref=GeneID:4490161;Name=AHA_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0614
NC_008570.1	RefSeq	CDS	654401	656596	.	-	0	ID=cds589;Parent=gene614;Dbxref=Genbank:YP_855153.1,GeneID:4490161;Name=YP_855153.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855153.1;transl_table=11
NC_008570.1	RefSeq	gene	656878	657588	.	+	.	ID=gene615;Dbxref=GeneID:4490162;Name=AHA_0615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0615
NC_008570.1	RefSeq	CDS	656878	657588	.	+	0	ID=cds590;Parent=gene615;Dbxref=Genbank:YP_855155.1,GeneID:4490162;Name=YP_855155.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855155.1;transl_table=11
NC_008570.1	RefSeq	gene	657609	658952	.	+	.	ID=gene616;Dbxref=GeneID:4490163;Name=AHA_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0616
NC_008570.1	RefSeq	CDS	657609	658952	.	+	0	ID=cds591;Parent=gene616;Dbxref=Genbank:YP_855156.1,GeneID:4490163;Name=YP_855156.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855156.1;transl_table=11
NC_008570.1	RefSeq	gene	659059	662220	.	-	.	ID=gene617;Dbxref=GeneID:4490164;Name=AHA_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0617
NC_008570.1	RefSeq	CDS	659059	662220	.	-	0	ID=cds592;Parent=gene617;Dbxref=Genbank:YP_855157.1,GeneID:4490164;Name=YP_855157.1;Note=identified by match to protein family HMM PF03572%3B match to protein family HMM PF07676;gbkey=CDS;product=tricorn protease-like protein;protein_id=YP_855157.1;transl_table=11
NC_008570.1	RefSeq	gene	662465	662956	.	+	.	ID=gene618;Dbxref=GeneID:4490165;Name=AHA_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0618
NC_008570.1	RefSeq	CDS	662465	662956	.	+	0	ID=cds593;Parent=gene618;Dbxref=Genbank:YP_855158.1,GeneID:4490165;Name=YP_855158.1;gbkey=CDS;product=ErfK/YbiS/YcfS/YnhG family protein;protein_id=YP_855158.1;transl_table=11
NC_008570.1	RefSeq	gene	663105	663824	.	+	.	ID=gene619;Dbxref=GeneID:4490166;Name=AHA_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0619
NC_008570.1	RefSeq	CDS	663105	663824	.	+	0	ID=cds594;Parent=gene619;Dbxref=Genbank:YP_855159.1,GeneID:4490166;Name=YP_855159.1;Note=identified by match to protein family HMM PF03591;gbkey=CDS;product=AzlC family protein;protein_id=YP_855159.1;transl_table=11
NC_008570.1	RefSeq	gene	664285	665811	.	+	.	ID=gene620;Dbxref=GeneID:4490167;Name=AHA_0620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0620
NC_008570.1	RefSeq	CDS	664285	665811	.	+	0	ID=cds595;Parent=gene620;Dbxref=Genbank:YP_855160.1,GeneID:4490167;Name=YP_855160.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855160.1;transl_table=11
NC_008570.1	RefSeq	gene	665849	666700	.	+	.	ID=gene621;Dbxref=GeneID:4490168;Name=AHA_0621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0621
NC_008570.1	RefSeq	CDS	665849	666700	.	+	0	ID=cds596;Parent=gene621;Dbxref=Genbank:YP_855161.1,GeneID:4490168;Name=YP_855161.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055;gbkey=CDS;product=pyruvate formate lyase activating enzyme;protein_id=YP_855161.1;transl_table=11
NC_008570.1	RefSeq	gene	666893	667216	.	+	.	ID=gene622;Dbxref=GeneID:4490169;Name=AHA_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0622
NC_008570.1	RefSeq	CDS	666893	667216	.	+	0	ID=cds597;Parent=gene622;Dbxref=Genbank:YP_855162.1,GeneID:4490169;Name=YP_855162.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855162.1;transl_table=11
NC_008570.1	RefSeq	gene	667259	668182	.	-	.	ID=gene623;Dbxref=GeneID:4489348;Name=AHA_0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0623
NC_008570.1	RefSeq	CDS	667259	668182	.	-	0	ID=cds598;Parent=gene623;Dbxref=Genbank:YP_855163.1,GeneID:4489348;Name=YP_855163.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855163.1;transl_table=11
NC_008570.1	RefSeq	gene	668243	669439	.	-	.	ID=gene624;Dbxref=GeneID:4489349;Name=AHA_0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0624
NC_008570.1	RefSeq	CDS	668243	669439	.	-	0	ID=cds599;Parent=gene624;Dbxref=Genbank:YP_855164.1,GeneID:4489349;Name=YP_855164.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=YP_855164.1;transl_table=11
NC_008570.1	RefSeq	gene	669609	669884	.	-	.	ID=gene625;Dbxref=GeneID:4489350;Name=AHA_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0625
NC_008570.1	RefSeq	CDS	669609	669884	.	-	0	ID=cds600;Parent=gene625;Dbxref=Genbank:YP_855165.1,GeneID:4489350;Name=YP_855165.1;Note=identified by match to protein family HMM PF02583;gbkey=CDS;product=hypothetical protein;protein_id=YP_855165.1;transl_table=11
NC_008570.1	RefSeq	gene	669956	670915	.	+	.	ID=gene626;Dbxref=GeneID:4489351;Name=AHA_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0626
NC_008570.1	RefSeq	CDS	669956	670915	.	+	0	ID=cds601;Parent=gene626;Dbxref=Genbank:YP_855166.1,GeneID:4489351;Name=YP_855166.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;product=heavy metal transporter;protein_id=YP_855166.1;transl_table=11
NC_008570.1	RefSeq	gene	670979	671389	.	-	.	ID=gene627;Dbxref=GeneID:4489352;Name=AHA_0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0627
NC_008570.1	RefSeq	CDS	670979	671389	.	-	0	ID=cds602;Parent=gene627;Dbxref=Genbank:YP_855167.1,GeneID:4489352;Name=YP_855167.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855167.1;transl_table=11
NC_008570.1	RefSeq	gene	671620	675708	.	+	.	ID=gene628;Dbxref=GeneID:4489353;Name=AHA_0628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0628
NC_008570.1	RefSeq	CDS	671620	675708	.	+	0	ID=cds603;Parent=gene628;Dbxref=Genbank:YP_855168.1,GeneID:4489353;Name=YP_855168.1;Note=identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02103;gbkey=CDS;product=pullulanase;protein_id=YP_855168.1;transl_table=11
NC_008570.1	RefSeq	gene	675901	678399	.	-	.	ID=gene629;Dbxref=GeneID:4489354;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AHA_0629
NC_008570.1	RefSeq	CDS	675901	678399	.	-	0	ID=cds604;Parent=gene629;Dbxref=Genbank:YP_855169.1,GeneID:4489354;Name=YP_855169.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=YP_855169.1;transl_table=11
NC_008570.1	RefSeq	gene	678536	679036	.	+	.	ID=gene630;Dbxref=GeneID:4489355;Name=AHA_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0630
NC_008570.1	RefSeq	CDS	678536	679036	.	+	0	ID=cds605;Parent=gene630;Dbxref=Genbank:YP_855170.1,GeneID:4489355;Name=YP_855170.1;gbkey=CDS;product=thiol peroxidase;protein_id=YP_855170.1;transl_table=11
NC_008570.1	RefSeq	gene	679099	679917	.	-	.	ID=gene631;Dbxref=GeneID:4489356;Name=AHA_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0631
NC_008570.1	RefSeq	CDS	679099	679917	.	-	0	ID=cds606;Parent=gene631;Dbxref=Genbank:YP_855171.1,GeneID:4489356;Name=YP_855171.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855171.1;transl_table=11
NC_008570.1	RefSeq	gene	680086	681306	.	+	.	ID=gene632;Dbxref=GeneID:4489357;Name=AHA_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0632
NC_008570.1	RefSeq	CDS	680086	681306	.	+	0	ID=cds607;Parent=gene632;Dbxref=Genbank:YP_855172.1,GeneID:4489357;Name=YP_855172.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=YP_855172.1;transl_table=11
NC_008570.1	RefSeq	gene	681402	682895	.	+	.	ID=gene633;Dbxref=GeneID:4489358;Name=AHA_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0633
NC_008570.1	RefSeq	CDS	681402	682895	.	+	0	ID=cds608;Parent=gene633;Dbxref=Genbank:YP_855173.1,GeneID:4489358;Name=YP_855173.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855173.1;transl_table=11
NC_008570.1	RefSeq	gene	682969	683757	.	-	.	ID=gene634;Dbxref=GeneID:4489359;Name=AHA_0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0634
NC_008570.1	RefSeq	CDS	682969	683757	.	-	0	ID=cds609;Parent=gene634;Dbxref=Genbank:YP_855174.1,GeneID:4489359;Name=YP_855174.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855174.1;transl_table=11
NC_008570.1	RefSeq	gene	683754	684869	.	-	.	ID=gene635;Dbxref=GeneID:4489360;Name=AHA_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0635
NC_008570.1	RefSeq	CDS	683754	684869	.	-	0	ID=cds610;Parent=gene635;Dbxref=Genbank:YP_855175.1,GeneID:4489360;Name=YP_855175.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=endonuclease/exonuclease/phosphatase family protein;protein_id=YP_855175.1;transl_table=11
NC_008570.1	RefSeq	gene	685279	686838	.	-	.	ID=gene636;Dbxref=GeneID:4489361;Name=AHA_0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0636
NC_008570.1	RefSeq	CDS	685279	686838	.	-	0	ID=cds611;Parent=gene636;Dbxref=Genbank:YP_855176.1,GeneID:4489361;Name=YP_855176.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM TIGR00229;gbkey=CDS;product=aerotaxis receptor Aer;protein_id=YP_855176.1;transl_table=11
NC_008570.1	RefSeq	gene	687080	687910	.	-	.	ID=gene637;Dbxref=GeneID:4489362;Name=AHA_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0637
NC_008570.1	RefSeq	CDS	687080	687910	.	-	0	ID=cds612;Parent=gene637;Dbxref=Genbank:YP_855177.1,GeneID:4489362;Name=YP_855177.1;Note=identified by match to protein family HMM PF02517;gbkey=CDS;product=CAAX amino protease;protein_id=YP_855177.1;transl_table=11
NC_008570.1	RefSeq	gene	688074	688364	.	-	.	ID=gene638;Dbxref=GeneID:4489363;Name=AHA_0638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0638
NC_008570.1	RefSeq	CDS	688074	688364	.	-	0	ID=cds613;Parent=gene638;Dbxref=Genbank:YP_855178.1,GeneID:4489363;Name=YP_855178.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855178.1;transl_table=11
NC_008570.1	RefSeq	gene	688428	688802	.	-	.	ID=gene639;Dbxref=GeneID:4489364;Name=AHA_0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0639
NC_008570.1	RefSeq	CDS	688428	688802	.	-	0	ID=cds614;Parent=gene639;Dbxref=Genbank:YP_855179.1,GeneID:4489364;Name=YP_855179.1;Note=identified by match to protein family HMM PF06062;gbkey=CDS;product=hypothetical protein;protein_id=YP_855179.1;transl_table=11
NC_008570.1	RefSeq	gene	689124	690239	.	+	.	ID=gene640;Dbxref=GeneID:4489365;Name=AHA_0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0640
NC_008570.1	RefSeq	CDS	689124	690239	.	+	0	ID=cds615;Parent=gene640;Dbxref=Genbank:YP_855180.1,GeneID:4489365;Name=YP_855180.1;Note=identified by match to protein family HMM PF05651;gbkey=CDS;product=carbohydrate diacid regulator;protein_id=YP_855180.1;transl_table=11
NC_008570.1	RefSeq	gene	690359	691621	.	+	.	ID=gene641;Dbxref=GeneID:4489366;Name=AHA_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0641
NC_008570.1	RefSeq	CDS	690359	691621	.	+	0	ID=cds616;Parent=gene641;Dbxref=Genbank:YP_855181.1,GeneID:4489366;Name=YP_855181.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600;gbkey=CDS;product=gluconate:H+ symporter (GntP) family protein;protein_id=YP_855181.1;transl_table=11
NC_008570.1	RefSeq	gene	691631	692764	.	+	.	ID=gene642;Dbxref=GeneID:4486826;Name=AHA_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0642
NC_008570.1	RefSeq	CDS	691631	692764	.	+	0	ID=cds617;Parent=gene642;Dbxref=Genbank:YP_855182.1,GeneID:4486826;Name=YP_855182.1;Note=identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045;gbkey=CDS;product=glycerate kinase;protein_id=YP_855182.1;transl_table=11
NC_008570.1	RefSeq	gene	692975	693538	.	+	.	ID=gene643;Dbxref=GeneID:4486827;Name=AHA_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0643
NC_008570.1	RefSeq	CDS	692975	693538	.	+	0	ID=cds618;Parent=gene643;Dbxref=Genbank:YP_855183.1,GeneID:4486827;Name=YP_855183.1;Note=identified by match to protein family HMM PF07298;gbkey=CDS;product=hypothetical protein;protein_id=YP_855183.1;transl_table=11
NC_008570.1	RefSeq	gene	693601	694134	.	+	.	ID=gene644;Dbxref=GeneID:4486828;Name=AHA_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0644
NC_008570.1	RefSeq	CDS	693601	694134	.	+	0	ID=cds619;Parent=gene644;Dbxref=Genbank:YP_855185.1,GeneID:4486828;Name=YP_855185.1;Note=identified by match to protein family HMM PF00255;gbkey=CDS;product=glutathione peroxidase;protein_id=YP_855185.1;transl_table=11
NC_008570.1	RefSeq	gene	694196	695152	.	+	.	ID=gene645;Dbxref=GeneID:4486829;Name=AHA_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0645
NC_008570.1	RefSeq	CDS	694196	695152	.	+	0	ID=cds620;Parent=gene645;Dbxref=Genbank:YP_855186.1,GeneID:4486829;Name=YP_855186.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855186.1;transl_table=11
NC_008570.1	RefSeq	gene	695335	696531	.	+	.	ID=gene646;Dbxref=GeneID:4486830;Name=AHA_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0646
NC_008570.1	RefSeq	CDS	695335	696531	.	+	0	ID=cds621;Parent=gene646;Dbxref=Genbank:YP_855188.1,GeneID:4486830;Name=YP_855188.1;Note=identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670;gbkey=CDS;product=nucleoside permease;protein_id=YP_855188.1;transl_table=11
NC_008570.1	RefSeq	gene	696794	697288	.	-	.	ID=gene647;Dbxref=GeneID:4486831;Name=AHA_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0647
NC_008570.1	RefSeq	CDS	696794	697288	.	-	0	ID=cds622;Parent=gene647;Dbxref=Genbank:YP_855189.1,GeneID:4486831;Name=YP_855189.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=YP_855189.1;transl_table=11
NC_008570.1	RefSeq	gene	697322	697738	.	-	.	ID=gene648;Dbxref=GeneID:4486832;Name=AHA_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0648
NC_008570.1	RefSeq	CDS	697322	697738	.	-	0	ID=cds623;Parent=gene648;Dbxref=Genbank:YP_855190.1,GeneID:4486832;Name=YP_855190.1;Note=identified by match to protein family HMM PF00472;gbkey=CDS;product=peptidyl-tRNA hydrolase domain-containing protein;protein_id=YP_855190.1;transl_table=11
NC_008570.1	RefSeq	gene	697940	698278	.	+	.	ID=gene649;Dbxref=GeneID:4486833;Name=AHA_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0649
NC_008570.1	RefSeq	CDS	697940	698278	.	+	0	ID=cds624;Parent=gene649;Dbxref=Genbank:YP_855191.1,GeneID:4486833;Name=YP_855191.1;Note=identified by match to protein family HMM PF00543;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=YP_855191.1;transl_table=11
NC_008570.1	RefSeq	gene	698486	699493	.	+	.	ID=gene650;Dbxref=GeneID:4486834;Name=AHA_0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0650
NC_008570.1	RefSeq	CDS	698486	699493	.	+	0	ID=cds625;Parent=gene650;Dbxref=Genbank:YP_855192.1,GeneID:4486834;Name=YP_855192.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=iron binding protein FbpA;protein_id=YP_855192.1;transl_table=11
NC_008570.1	RefSeq	gene	699534	701159	.	+	.	ID=gene651;Dbxref=GeneID:4486835;Name=fbpB;gbkey=Gene;gene=fbpB;gene_biotype=protein_coding;locus_tag=AHA_0651
NC_008570.1	RefSeq	CDS	699534	701159	.	+	0	ID=cds626;Parent=gene651;Dbxref=Genbank:YP_855193.1,GeneID:4486835;Name=YP_855193.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;gene=fbpB;product=iron(III) ABC transporter permease;protein_id=YP_855193.1;transl_table=11
NC_008570.1	RefSeq	gene	701229	702263	.	+	.	ID=gene652;Dbxref=GeneID:4486836;Name=AHA_0652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0652
NC_008570.1	RefSeq	CDS	701229	702263	.	+	0	ID=cds627;Parent=gene652;Dbxref=Genbank:YP_855194.1,GeneID:4486836;Name=YP_855194.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01189;gbkey=CDS;product=iron(III) ABC transporter ATP-binding protein;protein_id=YP_855194.1;transl_table=11
NC_008570.1	RefSeq	gene	702367	703272	.	+	.	ID=gene653;Dbxref=GeneID:4486837;Name=AHA_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0653
NC_008570.1	RefSeq	CDS	702367	703272	.	+	0	ID=cds628;Parent=gene653;Dbxref=Genbank:YP_855195.1,GeneID:4486837;Name=YP_855195.1;Note=identified by match to protein family HMM PF04261%3B match to protein family HMM TIGR01413;gbkey=CDS;product=TyrA protein;protein_id=YP_855195.1;transl_table=11
NC_008570.1	RefSeq	gene	703359	703829	.	-	.	ID=gene654;Dbxref=GeneID:4486838;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AHA_0654
NC_008570.1	RefSeq	CDS	703359	703829	.	-	0	ID=cds629;Parent=gene654;Dbxref=Genbank:YP_855196.1,GeneID:4486838;Name=YP_855196.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;gene=argR;product=arginine repressor;protein_id=YP_855196.1;transl_table=11
NC_008570.1	RefSeq	gene	704031	704771	.	+	.	ID=gene655;Dbxref=GeneID:4486839;Name=AHA_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0655
NC_008570.1	RefSeq	CDS	704031	704771	.	+	0	ID=cds630;Parent=gene655;Dbxref=Genbank:YP_855197.1,GeneID:4486839;Name=YP_855197.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=YP_855197.1;transl_table=11
NC_008570.1	RefSeq	gene	704797	705534	.	+	.	ID=gene656;Dbxref=GeneID:4486840;Name=AHA_0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0656
NC_008570.1	RefSeq	CDS	704797	705534	.	+	0	ID=cds631;Parent=gene656;Dbxref=Genbank:YP_855198.1,GeneID:4486840;Name=YP_855198.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=arginine ABC transporter periplasmic substrate-binding protein ArtI;protein_id=YP_855198.1;transl_table=11
NC_008570.1	RefSeq	gene	705538	706188	.	+	.	ID=gene657;Dbxref=GeneID:4486841;Name=AHA_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0657
NC_008570.1	RefSeq	CDS	705538	706188	.	+	0	ID=cds632;Parent=gene657;Dbxref=Genbank:YP_855199.1,GeneID:4486841;Name=YP_855199.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=arginine ABC transporter permease ArtQ;protein_id=YP_855199.1;transl_table=11
NC_008570.1	RefSeq	gene	706191	706853	.	+	.	ID=gene658;Dbxref=GeneID:4486842;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AHA_0658
NC_008570.1	RefSeq	CDS	706191	706853	.	+	0	ID=cds633;Parent=gene658;Dbxref=Genbank:YP_855200.1,GeneID:4486842;Name=YP_855200.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=YP_855200.1;transl_table=11
NC_008570.1	RefSeq	gene	707075	708010	.	+	.	ID=gene659;Dbxref=GeneID:4486843;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AHA_0659
NC_008570.1	RefSeq	CDS	707075	708010	.	+	0	ID=cds634;Parent=gene659;Dbxref=Genbank:YP_855201.1,GeneID:4486843;Name=YP_855201.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;gene=mdh;product=malate dehydrogenase;protein_id=YP_855201.1;transl_table=11
NC_008570.1	RefSeq	gene	708135	709046	.	+	.	ID=gene660;Dbxref=GeneID:4486844;Name=AHA_0660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0660
NC_008570.1	RefSeq	CDS	708135	709046	.	+	0	ID=cds635;Parent=gene660;Dbxref=Genbank:YP_855202.1,GeneID:4486844;Name=YP_855202.1;gbkey=CDS;product=sodium-type flagellar motor component;protein_id=YP_855202.1;transl_table=11
NC_008570.1	RefSeq	gene	709149	710342	.	-	.	ID=gene661;Dbxref=GeneID:4486845;Name=AHA_0661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0661
NC_008570.1	RefSeq	CDS	709149	710342	.	-	0	ID=cds636;Parent=gene661;Dbxref=Genbank:YP_855203.1,GeneID:4486845;Name=YP_855203.1;Note=identified by match to protein family HMM PF00042%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;product=flavohemoprotein;protein_id=YP_855203.1;transl_table=11
NC_008570.1	RefSeq	gene	710453	710920	.	+	.	ID=gene662;Dbxref=GeneID:4490669;Name=AHA_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0662
NC_008570.1	RefSeq	CDS	710453	710920	.	+	0	ID=cds637;Parent=gene662;Dbxref=Genbank:YP_855204.1,GeneID:4490669;Name=YP_855204.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;product=Rrf2 family protein;protein_id=YP_855204.1;transl_table=11
NC_008570.1	RefSeq	gene	710954	712234	.	-	.	ID=gene663;Dbxref=GeneID:4490670;Name=AHA_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0663
NC_008570.1	RefSeq	CDS	710954	712234	.	-	0	ID=cds638;Parent=gene663;Dbxref=Genbank:YP_855205.1,GeneID:4490670;Name=YP_855205.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;product=transporter;protein_id=YP_855205.1;transl_table=11
NC_008570.1	RefSeq	gene	712275	713066	.	-	.	ID=gene664;Dbxref=GeneID:4490671;Name=AHA_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0664
NC_008570.1	RefSeq	CDS	712275	713066	.	-	0	ID=cds639;Parent=gene664;Dbxref=Genbank:YP_855206.1,GeneID:4490671;Name=YP_855206.1;Note=identified by match to protein family HMM PF01578;gbkey=CDS;product=cytochrome C assembly protein;protein_id=YP_855206.1;transl_table=11
NC_008570.1	RefSeq	gene	713341	714717	.	+	.	ID=gene665;Dbxref=GeneID:4490672;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AHA_0665
NC_008570.1	RefSeq	CDS	713341	714717	.	+	0	ID=cds640;Parent=gene665;Dbxref=Genbank:YP_855207.1,GeneID:4490672;Name=YP_855207.1;Note=identified by similarity to SP:P07019%3B match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=YP_855207.1;transl_table=11
NC_008570.1	RefSeq	gene	714902	715150	.	+	.	ID=gene666;Dbxref=GeneID:4490673;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AHA_0666
NC_008570.1	RefSeq	CDS	714902	715150	.	+	0	ID=cds641;Parent=gene666;Dbxref=Genbank:YP_855208.1,GeneID:4490673;Name=YP_855208.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=YP_855208.1;transl_table=11
NC_008570.1	RefSeq	gene	715175	715696	.	+	.	ID=gene667;Dbxref=GeneID:4490674;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AHA_0667
NC_008570.1	RefSeq	CDS	715175	715696	.	+	0	ID=cds642;Parent=gene667;Dbxref=Genbank:YP_855209.1,GeneID:4490674;Name=YP_855209.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=YP_855209.1;transl_table=11
NC_008570.1	RefSeq	gene	715731	716480	.	+	.	ID=gene668;Dbxref=GeneID:4490675;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AHA_0668
NC_008570.1	RefSeq	CDS	715731	716480	.	+	0	ID=cds643;Parent=gene668;Dbxref=Genbank:YP_855210.1,GeneID:4490675;Name=YP_855210.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=YP_855210.1;transl_table=11
NC_008570.1	RefSeq	gene	716513	716860	.	+	.	ID=gene669;Dbxref=GeneID:4490676;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AHA_0669
NC_008570.1	RefSeq	CDS	716513	716860	.	+	0	ID=cds644;Parent=gene669;Dbxref=Genbank:YP_855211.1,GeneID:4490676;Name=YP_855211.1;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=YP_855211.1;transl_table=11
NC_008570.1	RefSeq	gene	716964	717293	.	-	.	ID=gene670;Dbxref=GeneID:4490677;Name=AHA_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0670
NC_008570.1	RefSeq	CDS	716964	717293	.	-	0	ID=cds645;Parent=gene670;Dbxref=Genbank:YP_855212.1,GeneID:4490677;Name=YP_855212.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=YP_855212.1;transl_table=11
NC_008570.1	RefSeq	gene	717376	718050	.	-	.	ID=gene671;Dbxref=GeneID:4490678;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AHA_0671
NC_008570.1	RefSeq	CDS	717376	718050	.	-	0	ID=cds646;Parent=gene671;Dbxref=Genbank:YP_855213.1,GeneID:4490678;Name=YP_855213.1;Note=MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair;gbkey=CDS;gene=mutH;product=DNA mismatch repair protein;protein_id=YP_855213.1;transl_table=11
NC_008570.1	RefSeq	gene	718784	719311	.	+	.	ID=gene672;Dbxref=GeneID:4490679;Name=AHA_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0672
NC_008570.1	RefSeq	CDS	718784	719311	.	+	0	ID=cds647;Parent=gene672;Dbxref=Genbank:YP_855214.1,GeneID:4490679;Name=YP_855214.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=dinucleoside polyphosphate hydrolase;protein_id=YP_855214.1;transl_table=11
NC_008570.1	RefSeq	gene	719326	721605	.	+	.	ID=gene673;Dbxref=GeneID:4490680;Name=ptsI-1;gbkey=Gene;gene=ptsI-1;gene_biotype=protein_coding;locus_tag=AHA_0673
NC_008570.1	RefSeq	CDS	719326	721605	.	+	0	ID=cds648;Parent=gene673;Dbxref=Genbank:YP_855215.1,GeneID:4490680;Name=YP_855215.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF01590%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsI-1;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_855215.1;transl_table=11
NC_008570.1	RefSeq	gene	721673	722497	.	+	.	ID=gene674;Dbxref=GeneID:4490681;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AHA_0674
NC_008570.1	RefSeq	CDS	721673	722497	.	+	0	ID=cds649;Parent=gene674;Dbxref=Genbank:YP_855216.1,GeneID:4490681;Name=YP_855216.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_855216.1;transl_table=11
NC_008570.1	RefSeq	gene	722497	723291	.	+	.	ID=gene675;Dbxref=GeneID:4490682;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AHA_0675
NC_008570.1	RefSeq	CDS	722497	723291	.	+	0	ID=cds650;Parent=gene675;Dbxref=Genbank:YP_855217.1,GeneID:4490682;Name=YP_855217.1;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=YP_855217.1;transl_table=11
NC_008570.1	RefSeq	gene	723518	724708	.	+	.	ID=gene676;Dbxref=GeneID:4490683;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AHA_0676
NC_008570.1	RefSeq	CDS	723518	724708	.	+	0	ID=cds651;Parent=gene676;Dbxref=Genbank:YP_855218.1,GeneID:4490683;Name=YP_855218.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=pH-dependent sodium/proton antiporter;protein_id=YP_855218.1;transl_table=11
NC_008570.1	RefSeq	gene	725099	726031	.	+	.	ID=gene677;Dbxref=GeneID:4490684;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AHA_0677
NC_008570.1	RefSeq	CDS	725099	726031	.	+	0	ID=cds652;Parent=gene677;Dbxref=Genbank:YP_855219.1,GeneID:4490684;Name=YP_855219.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional activator NhaR;protein_id=YP_855219.1;transl_table=11
NC_008570.1	RefSeq	gene	726057	726383	.	+	.	ID=gene678;Dbxref=GeneID:4490685;Name=AHA_0678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0678
NC_008570.1	RefSeq	CDS	726057	726383	.	+	0	ID=cds653;Parent=gene678;Dbxref=Genbank:YP_855220.1,GeneID:4490685;Name=YP_855220.1;Note=identified by match to protein family HMM PF01022%3B match to protein family HMM PF01638;gbkey=CDS;product=nodulation protein NolR;protein_id=YP_855220.1;transl_table=11
NC_008570.1	RefSeq	gene	726434	726697	.	-	.	ID=gene679;Dbxref=GeneID:4490686;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AHA_0679
NC_008570.1	RefSeq	CDS	726434	726697	.	-	0	ID=cds654;Parent=gene679;Dbxref=Genbank:YP_855221.1,GeneID:4490686;Name=YP_855221.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=YP_855221.1;transl_table=11
NC_008570.1	RefSeq	gene	726889	728454	.	+	.	ID=gene680;Dbxref=GeneID:4490687;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=AHA_0680
NC_008570.1	RefSeq	CDS	726889	728454	.	+	0	ID=cds655;Parent=gene680;Dbxref=Genbank:YP_855222.1,GeneID:4490687;Name=YP_855222.1;Note=identified by match to protein family HMM PF03023%3B match to protein family HMM TIGR01695;gbkey=CDS;gene=mviN;product=integral membrane protein MviN;protein_id=YP_855222.1;transl_table=11
NC_008570.1	RefSeq	gene	728596	729570	.	+	.	ID=gene681;Dbxref=GeneID:4487673;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AHA_0681
NC_008570.1	RefSeq	CDS	728596	729570	.	+	0	ID=cds656;Parent=gene681;Dbxref=Genbank:YP_855223.1,GeneID:4487673;Name=YP_855223.1;Note=identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083;gbkey=CDS;gene=ribF;product=riboflavin biosynthesis protein RibF;protein_id=YP_855223.1;transl_table=11
NC_008570.1	RefSeq	gene	729570	732431	.	+	.	ID=gene682;Dbxref=GeneID:4487674;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AHA_0682
NC_008570.1	RefSeq	CDS	729570	732431	.	+	0	ID=cds657;Parent=gene682;Dbxref=Genbank:YP_855224.1,GeneID:4487674;Name=YP_855224.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=YP_855224.1;transl_table=11
NC_008570.1	RefSeq	gene	732431	732934	.	+	.	ID=gene683;Dbxref=GeneID:4487675;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AHA_0683
NC_008570.1	RefSeq	CDS	732431	732934	.	+	0	ID=cds658;Parent=gene683;Dbxref=Genbank:YP_855225.1,GeneID:4487675;Name=YP_855225.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=YP_855225.1;transl_table=11
NC_008570.1	RefSeq	gene	732931	733383	.	+	.	ID=gene684;Dbxref=GeneID:4487676;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AHA_0684
NC_008570.1	RefSeq	CDS	732931	733383	.	+	0	ID=cds659;Parent=gene684;Dbxref=Genbank:YP_855226.1,GeneID:4487676;Name=YP_855226.1;Note=identified by match to protein family HMM PF00254;gbkey=CDS;gene=fkpB;product=FKBP-type peptidyl-prolyl cis-trans isomerase FkpB;protein_id=YP_855226.1;transl_table=11
NC_008570.1	RefSeq	gene	733383	734318	.	+	.	ID=gene685;Dbxref=GeneID:4487677;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=AHA_0685
NC_008570.1	RefSeq	CDS	733383	734318	.	+	0	ID=cds660;Parent=gene685;Dbxref=Genbank:YP_855227.1,GeneID:4487677;Name=YP_855227.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=YP_855227.1;transl_table=11
NC_008570.1	RefSeq	gene	734580	735083	.	+	.	ID=gene686;Dbxref=GeneID:4487678;Name=AHA_0686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0686
NC_008570.1	RefSeq	CDS	734580	735083	.	+	0	ID=cds661;Parent=gene686;Dbxref=Genbank:YP_855228.1,GeneID:4487678;Name=YP_855228.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855228.1;transl_table=11
NC_008570.1	RefSeq	gene	735080	735493	.	+	.	ID=gene687;Dbxref=GeneID:4487679;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=AHA_0687
NC_008570.1	RefSeq	CDS	735080	735493	.	+	0	ID=cds662;Parent=gene687;Dbxref=Genbank:YP_855229.1,GeneID:4487679;Name=YP_855229.1;Note=identified by match to protein family HMM TIGR02523%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=pilV;product=type IV pilus modification protein PilV;protein_id=YP_855229.1;transl_table=11
NC_008570.1	RefSeq	gene	735490	736584	.	+	.	ID=gene688;Dbxref=GeneID:4487680;Name=AHA_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0688
NC_008570.1	RefSeq	CDS	735490	736584	.	+	0	ID=cds663;Parent=gene688;Dbxref=Genbank:YP_855230.1,GeneID:4487680;Name=YP_855230.1;gbkey=CDS;product=type IV pilin;protein_id=YP_855230.1;transl_table=11
NC_008570.1	RefSeq	gene	736595	737071	.	+	.	ID=gene689;Dbxref=GeneID:4487681;Name=AHA_0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0689
NC_008570.1	RefSeq	CDS	736595	737071	.	+	0	ID=cds664;Parent=gene689;Dbxref=Genbank:YP_855231.1,GeneID:4487681;Name=YP_855231.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855231.1;transl_table=11
NC_008570.1	RefSeq	gene	737083	740436	.	+	.	ID=gene690;Dbxref=GeneID:4487682;Name=AHA_0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0690
NC_008570.1	RefSeq	CDS	737083	740436	.	+	0	ID=cds665;Parent=gene690;Dbxref=Genbank:YP_855232.1,GeneID:4487682;Name=YP_855232.1;Note=identified by similarity to GB:AAA93502.1;gbkey=CDS;product=type IV pilus biogenesis protein;protein_id=YP_855232.1;transl_table=11
NC_008570.1	RefSeq	gene	740445	740846	.	+	.	ID=gene691;Dbxref=GeneID:4487683;Name=AHA_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0691
NC_008570.1	RefSeq	CDS	740445	740846	.	+	0	ID=cds666;Parent=gene691;Dbxref=Genbank:YP_855233.1,GeneID:4487683;Name=YP_855233.1;Note=identified by similarity to GB:AAC38305.1%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855233.1;transl_table=11
NC_008570.1	RefSeq	gene	740851	741237	.	-	.	ID=gene692;Dbxref=GeneID:4488314;Name=AHA_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0692
NC_008570.1	RefSeq	CDS	740851	741237	.	-	0	ID=cds667;Parent=gene692;Dbxref=Genbank:YP_855234.1,GeneID:4488314;Name=YP_855234.1;Note=identified by similarity to GB:AAC38305.1%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855234.1;transl_table=11
NC_008570.1	RefSeq	gene	741332	741868	.	+	.	ID=gene693;Dbxref=GeneID:4488315;Name=AHA_0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0693
NC_008570.1	RefSeq	CDS	741332	741868	.	+	0	ID=cds668;Parent=gene693;Dbxref=Genbank:YP_855235.1,GeneID:4488315;Name=YP_855235.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855235.1;transl_table=11
NC_008570.1	RefSeq	gene	741859	742482	.	+	.	ID=gene694;Dbxref=GeneID:4488316;Name=AHA_0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0694
NC_008570.1	RefSeq	CDS	741859	742482	.	+	0	ID=cds669;Parent=gene694;Dbxref=Genbank:YP_855236.1,GeneID:4488316;Name=YP_855236.1;Note=identified by match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855236.1;transl_table=11
NC_008570.1	RefSeq	gene	742484	743581	.	+	.	ID=gene695;Dbxref=GeneID:4488317;Name=AHA_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0695
NC_008570.1	RefSeq	CDS	742484	743581	.	+	0	ID=cds670;Parent=gene695;Dbxref=Genbank:YP_855237.1,GeneID:4488317;Name=YP_855237.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855237.1;transl_table=11
NC_008570.1	RefSeq	gene	743594	745693	.	+	.	ID=gene696;Dbxref=GeneID:4488318;Name=AHA_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0696
NC_008570.1	RefSeq	CDS	743594	745693	.	+	0	ID=cds671;Parent=gene696;Dbxref=Genbank:YP_855238.1,GeneID:4488318;Name=YP_855238.1;Note=identified by match to protein family HMM TIGR02532;gbkey=CDS;product=type IV pilin;protein_id=YP_855238.1;transl_table=11
NC_008570.1	RefSeq	gene	745767	747389	.	+	.	ID=gene697;Dbxref=GeneID:4488319;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AHA_0697
NC_008570.1	RefSeq	CDS	745767	747389	.	+	0	ID=cds672;Parent=gene697;Dbxref=Genbank:YP_855239.1,GeneID:4488319;Name=YP_855239.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=YP_855239.1;transl_table=11
NC_008570.1	RefSeq	gene	747399	747737	.	+	.	ID=gene698;Dbxref=GeneID:4488320;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AHA_0698
NC_008570.1	RefSeq	CDS	747399	747737	.	+	0	ID=cds673;Parent=gene698;Dbxref=Genbank:YP_855240.1,GeneID:4488320;Name=YP_855240.1;Note=identified by similarity to SP:P0A9Z1%3B match to protein family HMM PF00543;gbkey=CDS;gene=glnB;product=nitrogen regulatory protein P-II 1;protein_id=YP_855240.1;transl_table=11
NC_008570.1	RefSeq	gene	747748	748392	.	+	.	ID=gene699;Dbxref=GeneID:4488321;Name=AHA_0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0699
NC_008570.1	RefSeq	CDS	747748	748392	.	+	0	ID=cds674;Parent=gene699;Dbxref=Genbank:YP_855241.1,GeneID:4488321;Name=YP_855241.1;gbkey=CDS;product=transcriptional regulatory protein;protein_id=YP_855241.1;transl_table=11
NC_008570.1	RefSeq	gene	748411	748920	.	+	.	ID=gene700;Dbxref=GeneID:4488322;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AHA_0700
NC_008570.1	RefSeq	CDS	748411	748920	.	+	0	ID=cds675;Parent=gene700;Dbxref=Genbank:YP_855242.1,GeneID:4488322;Name=YP_855242.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteinase;protein_id=YP_855242.1;transl_table=11
NC_008570.1	RefSeq	gene	748983	749948	.	-	.	ID=gene701;Dbxref=GeneID:4488323;Name=AHA_0701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0701
NC_008570.1	RefSeq	CDS	748983	749948	.	-	0	ID=cds676;Parent=gene701;Dbxref=Genbank:YP_855243.1,GeneID:4488323;Name=YP_855243.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_855243.1;transl_table=11
NC_008570.1	RefSeq	gene	750140	752539	.	+	.	ID=gene702;Dbxref=GeneID:4488324;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AHA_0702
NC_008570.1	RefSeq	CDS	750140	752539	.	+	0	ID=cds677;Parent=gene702;Dbxref=Genbank:YP_855244.1,GeneID:4488324;Name=YP_855244.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063;gbkey=CDS;gene=rnr;product=ribonuclease R;protein_id=YP_855244.1;transl_table=11
NC_008570.1	RefSeq	gene	752536	753285	.	+	.	ID=gene703;Dbxref=GeneID:4488325;Name=AHA_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0703
NC_008570.1	RefSeq	CDS	752536	753285	.	+	0	ID=cds678;Parent=gene703;Dbxref=Genbank:YP_855245.1,GeneID:4488325;Name=YP_855245.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_855245.1;transl_table=11
NC_008570.1	RefSeq	gene	753296	753862	.	+	.	ID=gene704;Dbxref=GeneID:4488326;Name=AHA_0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0704
NC_008570.1	RefSeq	CDS	753296	753862	.	+	0	ID=cds679;Parent=gene704;Dbxref=Genbank:YP_855246.1,GeneID:4488326;Name=YP_855246.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cAMP-binding protein;protein_id=YP_855246.1;transl_table=11
NC_008570.1	RefSeq	gene	753920	754369	.	+	.	ID=gene705;Dbxref=GeneID:4488327;Name=AHA_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0705
NC_008570.1	RefSeq	CDS	753920	754369	.	+	0	ID=cds680;Parent=gene705;Dbxref=Genbank:YP_855247.1,GeneID:4488327;Name=YP_855247.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855247.1;transl_table=11
NC_008570.1	RefSeq	gene	754597	755448	.	+	.	ID=gene706;Dbxref=GeneID:4488328;Name=AHA_0706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0706
NC_008570.1	RefSeq	CDS	754597	755448	.	+	0	ID=cds681;Parent=gene706;Dbxref=Genbank:YP_855248.1,GeneID:4488328;Name=YP_855248.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_855248.1;transl_table=11
NC_008570.1	RefSeq	gene	755566	756402	.	+	.	ID=gene707;Dbxref=GeneID:4488329;Name=AHA_0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0707
NC_008570.1	RefSeq	CDS	755566	756402	.	+	0	ID=cds682;Parent=gene707;Dbxref=Genbank:YP_855249.1,GeneID:4488329;Name=YP_855249.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter (DME) family protein;protein_id=YP_855249.1;transl_table=11
NC_008570.1	RefSeq	gene	756436	757284	.	-	.	ID=gene708;Dbxref=GeneID:4488330;Name=AHA_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0708
NC_008570.1	RefSeq	CDS	756436	757284	.	-	0	ID=cds683;Parent=gene708;Dbxref=Genbank:YP_855250.1,GeneID:4488330;Name=YP_855250.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855250.1;transl_table=11
NC_008570.1	RefSeq	gene	757392	758630	.	-	.	ID=gene709;Dbxref=GeneID:4488331;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AHA_0709
NC_008570.1	RefSeq	CDS	757392	758630	.	-	0	ID=cds684;Parent=gene709;Dbxref=Genbank:YP_855251.1,GeneID:4488331;Name=YP_855251.1;Note=identified by similarity to SP:P0A769%3B match to protein family HMM PF01566%3B match to protein family HMM TIGR01197;gbkey=CDS;gene=mntH;product=manganese transport protein MntH;protein_id=YP_855251.1;transl_table=11
NC_008570.1	RefSeq	gene	758853	759239	.	+	.	ID=gene710;Dbxref=GeneID:4488332;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AHA_0710
NC_008570.1	RefSeq	CDS	758853	759239	.	+	0	ID=cds685;Parent=gene710;Dbxref=Genbank:YP_855252.1,GeneID:4488332;Name=YP_855252.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=YP_855252.1;transl_table=11
NC_008570.1	RefSeq	gene	759270	759500	.	+	.	ID=gene711;Dbxref=GeneID:4487095;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AHA_0711
NC_008570.1	RefSeq	CDS	759270	759500	.	+	0	ID=cds686;Parent=gene711;Dbxref=Genbank:YP_855253.1,GeneID:4487095;Name=YP_855253.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=YP_855253.1;transl_table=11
NC_008570.1	RefSeq	gene	759553	759999	.	+	.	ID=gene712;Dbxref=GeneID:4487096;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AHA_0712
NC_008570.1	RefSeq	CDS	759553	759999	.	+	0	ID=cds687;Parent=gene712;Dbxref=Genbank:YP_855255.1,GeneID:4487096;Name=YP_855255.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=YP_855255.1;transl_table=11
NC_008570.1	RefSeq	gene	760101	760841	.	+	.	ID=gene713;Dbxref=GeneID:4487097;Name=AHA_0713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0713
NC_008570.1	RefSeq	CDS	760101	760841	.	+	0	ID=cds688;Parent=gene713;Dbxref=Genbank:YP_855257.1,GeneID:4487097;Name=YP_855257.1;Note=identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;product=ferredoxin--NADP reductase;protein_id=YP_855257.1;transl_table=11
NC_008570.1	RefSeq	gene	760894	761211	.	-	.	ID=gene714;Dbxref=GeneID:4487098;Name=AHA_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0714
NC_008570.1	RefSeq	CDS	760894	761211	.	-	0	ID=cds689;Parent=gene714;Dbxref=Genbank:YP_855258.1,GeneID:4487098;Name=YP_855258.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855258.1;transl_table=11
NC_008570.1	RefSeq	gene	761574	762512	.	+	.	ID=gene715;Dbxref=GeneID:4487099;Name=AHA_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0715
NC_008570.1	RefSeq	CDS	761574	762512	.	+	0	ID=cds690;Parent=gene715;Dbxref=Genbank:YP_855261.1,GeneID:4487099;Name=YP_855261.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855261.1;transl_table=11
NC_008570.1	RefSeq	gene	762562	762765	.	-	.	ID=gene716;Dbxref=GeneID:4487100;Name=AHA_0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0716
NC_008570.1	RefSeq	CDS	762562	762765	.	-	0	ID=cds691;Parent=gene716;Dbxref=Genbank:YP_855262.1,GeneID:4487100;Name=YP_855262.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855262.1;transl_table=11
NC_008570.1	RefSeq	gene	762774	763751	.	+	.	ID=gene717;Dbxref=GeneID:4487101;Name=AHA_0717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0717
NC_008570.1	RefSeq	CDS	762774	763751	.	+	0	ID=cds692;Parent=gene717;Dbxref=Genbank:YP_855263.1,GeneID:4487101;Name=YP_855263.1;Note=identified by match to protein family HMM PF00107;gbkey=CDS;product=quinone oxidoreductase;protein_id=YP_855263.1;transl_table=11
NC_008570.1	RefSeq	gene	763748	764185	.	+	.	ID=gene718;Dbxref=GeneID:4487102;Name=AHA_0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0718
NC_008570.1	RefSeq	CDS	763748	764185	.	+	0	ID=cds693;Parent=gene718;Dbxref=Genbank:YP_855264.1,GeneID:4487102;Name=YP_855264.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855264.1;transl_table=11
NC_008570.1	RefSeq	gene	764205	767018	.	+	.	ID=gene719;Dbxref=GeneID:4487103;Name=AHA_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0719
NC_008570.1	RefSeq	CDS	764205	767018	.	+	0	ID=cds694;Parent=gene719;Dbxref=Genbank:YP_855265.1,GeneID:4487103;Name=YP_855265.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193;gbkey=CDS;product=M16B family peptidase;protein_id=YP_855265.1;transl_table=11
NC_008570.1	RefSeq	gene	767079	768668	.	+	.	ID=gene720;Dbxref=GeneID:4487104;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AHA_0720
NC_008570.1	RefSeq	CDS	767079	768668	.	+	0	ID=cds695;Parent=gene720;Dbxref=Genbank:YP_855266.1,GeneID:4487104;Name=YP_855266.1;Note=identified by match to protein family HMM PF04262%3B match to protein family HMM TIGR01434;gbkey=CDS;gene=gshA;product=glutamate--cysteine ligase;protein_id=YP_855266.1;transl_table=11
NC_008570.1	RefSeq	gene	768923	770137	.	+	.	ID=gene721;Dbxref=GeneID:4487105;Name=AHA_0721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0721
NC_008570.1	RefSeq	CDS	768923	770137	.	+	0	ID=cds696;Parent=gene721;Dbxref=Genbank:YP_855267.1,GeneID:4487105;Name=YP_855267.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855267.1;transl_table=11
NC_008570.1	RefSeq	gene	770220	772010	.	-	.	ID=gene722;Dbxref=GeneID:4487106;Name=AHA_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0722
NC_008570.1	RefSeq	CDS	770220	772010	.	-	0	ID=cds697;Parent=gene722;Dbxref=Genbank:YP_855268.1,GeneID:4487106;Name=YP_855268.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain-fatty-acid--CoA ligase-like protein;protein_id=YP_855268.1;transl_table=11
NC_008570.1	RefSeq	gene	772197	772742	.	+	.	ID=gene723;Dbxref=GeneID:4487107;Name=AHA_0723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0723
NC_008570.1	RefSeq	CDS	772197	772742	.	+	0	ID=cds698;Parent=gene723;Dbxref=Genbank:YP_855269.1,GeneID:4487107;Name=YP_855269.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855269.1;transl_table=11
NC_008570.1	RefSeq	gene	772768	773217	.	-	.	ID=gene724;Dbxref=GeneID:4487108;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AHA_0724
NC_008570.1	RefSeq	CDS	772768	773217	.	-	0	ID=cds699;Parent=gene724;Dbxref=Genbank:YP_855270.1,GeneID:4487108;Name=YP_855270.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine acetyltransferase;protein_id=YP_855270.1;transl_table=11
NC_008570.1	RefSeq	gene	773947	775593	.	+	.	ID=gene725;Dbxref=GeneID:4487109;Name=AHA_0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0725
NC_008570.1	RefSeq	CDS	773947	775593	.	+	0	ID=cds700;Parent=gene725;Dbxref=Genbank:YP_855271.1,GeneID:4487109;Name=YP_855271.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;product=ATPase;protein_id=YP_855271.1;transl_table=11
NC_008570.1	RefSeq	gene	775781	777100	.	+	.	ID=gene726;Dbxref=GeneID:4487110;Name=yieM;gbkey=Gene;gene=yieM;gene_biotype=protein_coding;locus_tag=AHA_0726
NC_008570.1	RefSeq	CDS	775781	777100	.	+	0	ID=cds701;Parent=gene726;Dbxref=Genbank:YP_855272.1,GeneID:4487110;Name=YP_855272.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;gene=yieM;product=hypothetical protein;protein_id=YP_855272.1;transl_table=11
NC_008570.1	RefSeq	gene	777110	778114	.	-	.	ID=gene727;Dbxref=GeneID:4487111;Name=AHA_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0727
NC_008570.1	RefSeq	CDS	777110	778114	.	-	0	ID=cds702;Parent=gene727;Dbxref=Genbank:YP_855273.1,GeneID:4487111;Name=YP_855273.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase/phosphodiesterase;protein_id=YP_855273.1;transl_table=11
NC_008570.1	RefSeq	gene	778338	779258	.	+	.	ID=gene728;Dbxref=GeneID:4487112;Name=AHA_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0728
NC_008570.1	RefSeq	CDS	778338	779258	.	+	0	ID=cds703;Parent=gene728;Dbxref=Genbank:YP_855274.1,GeneID:4487112;Name=YP_855274.1;Note=identified by match to protein family HMM PF00515;gbkey=CDS;product=hypothetical protein;protein_id=YP_855274.1;transl_table=11
NC_008570.1	RefSeq	gene	779375	780184	.	+	.	ID=gene729;Dbxref=GeneID:4487113;Name=AHA_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0729
NC_008570.1	RefSeq	CDS	779375	780184	.	+	0	ID=cds704;Parent=gene729;Dbxref=Genbank:YP_855275.1,GeneID:4487113;Name=YP_855275.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_855275.1;transl_table=11
NC_008570.1	RefSeq	gene	780442	782028	.	+	.	ID=gene730;Dbxref=GeneID:4487114;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AHA_0730
NC_008570.1	RefSeq	CDS	780442	782028	.	+	0	ID=cds705;Parent=gene730;Dbxref=Genbank:YP_855276.1,GeneID:4487114;Name=YP_855276.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=YP_855276.1;transl_table=11
NC_008570.1	RefSeq	gene	782197	782535	.	+	.	ID=gene731;Dbxref=GeneID:4487056;Name=AHA_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0731
NC_008570.1	RefSeq	CDS	782197	782535	.	+	0	ID=cds706;Parent=gene731;Dbxref=Genbank:YP_855277.1,GeneID:4487056;Name=YP_855277.1;gbkey=CDS;product=steroid delta-isomerase domain-containing protein;protein_id=YP_855277.1;transl_table=11
NC_008570.1	RefSeq	gene	782602	783096	.	-	.	ID=gene732;Dbxref=GeneID:4487057;Name=AHA_0732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0732
NC_008570.1	RefSeq	CDS	782602	783096	.	-	0	ID=cds707;Parent=gene732;Dbxref=Genbank:YP_855278.1,GeneID:4487057;Name=YP_855278.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=transcriptional regulatory protein;protein_id=YP_855278.1;transl_table=11
NC_008570.1	RefSeq	gene	783159	783617	.	+	.	ID=gene733;Dbxref=GeneID:4487058;Name=AHA_0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0733
NC_008570.1	RefSeq	CDS	783159	783617	.	+	0	ID=cds708;Parent=gene733;Dbxref=Genbank:YP_855279.1,GeneID:4487058;Name=YP_855279.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;product=alkylhydroperoxidase;protein_id=YP_855279.1;transl_table=11
NC_008570.1	RefSeq	gene	783675	784613	.	-	.	ID=gene734;Dbxref=GeneID:4487059;Name=AHA_0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0734
NC_008570.1	RefSeq	CDS	783675	784613	.	-	0	ID=cds709;Parent=gene734;Dbxref=Genbank:YP_855280.1,GeneID:4487059;Name=YP_855280.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_855280.1;transl_table=11
NC_008570.1	RefSeq	gene	784819	785940	.	-	.	ID=gene735;Dbxref=GeneID:4487060;Name=xenB;gbkey=Gene;gene=xenB;gene_biotype=protein_coding;locus_tag=AHA_0735
NC_008570.1	RefSeq	CDS	784819	785940	.	-	0	ID=cds710;Parent=gene735;Dbxref=Genbank:YP_855281.1,GeneID:4487060;Name=YP_855281.1;Note=identified by similarity to GB:AAF02539.1%3B match to protein family HMM PF00724;gbkey=CDS;gene=xenB;product=xenobiotic reductase B;protein_id=YP_855281.1;transl_table=11
NC_008570.1	RefSeq	gene	786045	786611	.	+	.	ID=gene736;Dbxref=GeneID:4487061;Name=AHA_0736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0736
NC_008570.1	RefSeq	CDS	786045	786611	.	+	0	ID=cds711;Parent=gene736;Dbxref=Genbank:YP_855282.1,GeneID:4487061;Name=YP_855282.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_855282.1;transl_table=11
NC_008570.1	RefSeq	gene	786751	787707	.	-	.	ID=gene737;Dbxref=GeneID:4487062;Name=AHA_0737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0737
NC_008570.1	RefSeq	CDS	786751	787707	.	-	0	ID=cds712;Parent=gene737;Dbxref=Genbank:YP_855283.1,GeneID:4487062;Name=YP_855283.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855283.1;transl_table=11
NC_008570.1	RefSeq	gene	787858	788955	.	+	.	ID=gene738;Dbxref=GeneID:4487063;Name=AHA_0738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0738
NC_008570.1	RefSeq	CDS	787858	788955	.	+	0	ID=cds713;Parent=gene738;Dbxref=Genbank:YP_855284.1,GeneID:4487063;Name=YP_855284.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=YP_855284.1;transl_table=11
NC_008570.1	RefSeq	gene	789082	790785	.	+	.	ID=gene739;Dbxref=GeneID:4487064;Name=AHA_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0739
NC_008570.1	RefSeq	CDS	789082	790785	.	+	0	ID=cds714;Parent=gene739;Dbxref=Genbank:YP_855285.1,GeneID:4487064;Name=YP_855285.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=YP_855285.1;transl_table=11
NC_008570.1	RefSeq	gene	792493	793254	.	+	.	ID=gene740;Dbxref=GeneID:4487065;Name=AHA_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0740
NC_008570.1	RefSeq	CDS	792493	793254	.	+	0	ID=cds715;Parent=gene740;Dbxref=Genbank:YP_855286.1,GeneID:4487065;Name=YP_855286.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=beta-lactamase;protein_id=YP_855286.1;transl_table=11
NC_008570.1	RefSeq	gene	793418	794710	.	+	.	ID=gene741;Dbxref=GeneID:4487066;Name=AHA_0741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0741
NC_008570.1	RefSeq	CDS	793418	794710	.	+	0	ID=cds716;Parent=gene741;Dbxref=Genbank:YP_855287.1,GeneID:4487066;Name=YP_855287.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855287.1;transl_table=11
NC_008570.1	RefSeq	gene	794781	796031	.	-	.	ID=gene742;Dbxref=GeneID:4487067;Name=AHA_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0742
NC_008570.1	RefSeq	CDS	794781	796031	.	-	0	ID=cds717;Parent=gene742;Dbxref=Genbank:YP_855288.1,GeneID:4487067;Name=YP_855288.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_855288.1;transl_table=11
NC_008570.1	RefSeq	gene	796134	797003	.	-	.	ID=gene743;Dbxref=GeneID:4487068;Name=AHA_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0743
NC_008570.1	RefSeq	CDS	796134	797003	.	-	0	ID=cds718;Parent=gene743;Dbxref=Genbank:YP_855289.1,GeneID:4487068;Name=YP_855289.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=regulatory protein LysR;protein_id=YP_855289.1;transl_table=11
NC_008570.1	RefSeq	gene	797223	798455	.	+	.	ID=gene744;Dbxref=GeneID:4487069;Name=AHA_0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0744
NC_008570.1	RefSeq	CDS	797223	798455	.	+	0	ID=cds719;Parent=gene744;Dbxref=Genbank:YP_855290.1,GeneID:4487069;Name=YP_855290.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=valanimycin resistance;protein_id=YP_855290.1;transl_table=11
NC_008570.1	RefSeq	gene	798462	798917	.	-	.	ID=gene745;Dbxref=GeneID:4487070;Name=AHA_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0745
NC_008570.1	RefSeq	CDS	798462	798917	.	-	0	ID=cds720;Parent=gene745;Dbxref=Genbank:YP_855291.1,GeneID:4487070;Name=YP_855291.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855291.1;transl_table=11
NC_008570.1	RefSeq	gene	799088	799996	.	+	.	ID=gene746;Dbxref=GeneID:4487071;Name=AHA_0746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0746
NC_008570.1	RefSeq	CDS	799088	799996	.	+	0	ID=cds721;Parent=gene746;Dbxref=Genbank:YP_855292.1,GeneID:4487071;Name=YP_855292.1;Note=identified by match to protein family HMM PF01887;gbkey=CDS;product=hypothetical protein;protein_id=YP_855292.1;transl_table=11
NC_008570.1	RefSeq	gene	800063	800356	.	-	.	ID=gene747;Dbxref=GeneID:4487072;Name=AHA_0747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0747
NC_008570.1	RefSeq	CDS	800063	800356	.	-	0	ID=cds722;Parent=gene747;Dbxref=Genbank:YP_855293.1,GeneID:4487072;Name=YP_855293.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855293.1;transl_table=11
NC_008570.1	RefSeq	gene	800502	801062	.	-	.	ID=gene748;Dbxref=GeneID:4487073;Name=AHA_0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0748
NC_008570.1	RefSeq	CDS	800502	801062	.	-	0	ID=cds723;Parent=gene748;Dbxref=Genbank:YP_855294.1,GeneID:4487073;Name=YP_855294.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_855294.1;transl_table=11
NC_008570.1	RefSeq	gene	801320	801940	.	+	.	ID=gene749;Dbxref=GeneID:4487074;Name=AHA_0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0749
NC_008570.1	RefSeq	CDS	801320	801940	.	+	0	ID=cds724;Parent=gene749;Dbxref=Genbank:YP_855295.1,GeneID:4487074;Name=YP_855295.1;Note=identified by match to protein family HMM PF00445;gbkey=CDS;product=ribonuclease T2 family protein;protein_id=YP_855295.1;transl_table=11
NC_008570.1	RefSeq	gene	802009	802293	.	+	.	ID=gene750;Dbxref=GeneID:4488103;Name=AHA_0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0750
NC_008570.1	RefSeq	CDS	802009	802293	.	+	0	ID=cds725;Parent=gene750;Dbxref=Genbank:YP_855296.1,GeneID:4488103;Name=YP_855296.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855296.1;transl_table=11
NC_008570.1	RefSeq	gene	802290	803348	.	+	.	ID=gene751;Dbxref=GeneID:4488104;Name=AHA_0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0751
NC_008570.1	RefSeq	CDS	802290	803348	.	+	0	ID=cds726;Parent=gene751;Dbxref=Genbank:YP_855297.1,GeneID:4488104;Name=YP_855297.1;Note=identified by match to protein family HMM PF03060;gbkey=CDS;product=2-nitropropane dioxygenase;protein_id=YP_855297.1;transl_table=11
NC_008570.1	RefSeq	gene	803843	805392	.	+	.	ID=gene752;Dbxref=GeneID:4488105;Name=rrsE;gbkey=Gene;gene=rrsE;gene_biotype=rRNA;locus_tag=AHA_0752
NC_008570.1	RefSeq	rRNA	803843	805392	.	+	.	ID=rna25;Parent=gene752;Dbxref=GeneID:4488105;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	803843	805392	.	+	.	ID=id26;Parent=rna25;Dbxref=GeneID:4488105;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	805590	805665	.	+	.	ID=gene753;Dbxref=GeneID:4488106;Name=AHA_0753;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0753
NC_008570.1	RefSeq	tRNA	805590	805665	.	+	.	ID=rna26;Parent=gene753;Dbxref=GeneID:4488106;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	805590	805665	.	+	.	ID=id27;Parent=rna26;Dbxref=GeneID:4488106;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	805904	808792	.	+	.	ID=gene754;Dbxref=GeneID:4488107;Name=rrlE;gbkey=Gene;gene=rrlE;gene_biotype=rRNA;locus_tag=AHA_0754
NC_008570.1	RefSeq	rRNA	805904	808792	.	+	.	ID=rna27;Parent=gene754;Dbxref=GeneID:4488107;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	805904	808792	.	+	.	ID=id28;Parent=rna27;Dbxref=GeneID:4488107;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	808907	809026	.	+	.	ID=gene755;Dbxref=GeneID:4488108;Name=rrfE;gbkey=Gene;gene=rrfE;gene_biotype=rRNA;locus_tag=AHA_0755
NC_008570.1	RefSeq	rRNA	808907	809026	.	+	.	ID=rna28;Parent=gene755;Dbxref=GeneID:4488108;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	808907	809026	.	+	.	ID=id29;Parent=rna28;Dbxref=GeneID:4488108;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	809122	809198	.	+	.	ID=gene756;Dbxref=GeneID:4488109;Name=AHA_0756;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0756
NC_008570.1	RefSeq	tRNA	809122	809198	.	+	.	ID=rna29;Parent=gene756;Dbxref=GeneID:4488109;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	exon	809122	809198	.	+	.	ID=id30;Parent=rna29;Dbxref=GeneID:4488109;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	gene	809221	810054	.	+	.	ID=gene757;Dbxref=GeneID:4488110;Name=AHA_0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0757
NC_008570.1	RefSeq	CDS	809221	810054	.	+	0	ID=cds727;Parent=gene757;Dbxref=Genbank:YP_855298.1,GeneID:4488110;Name=YP_855298.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_855298.1;transl_table=11
NC_008570.1	RefSeq	gene	810083	811306	.	-	.	ID=gene758;Dbxref=GeneID:4488111;Name=AHA_0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0758
NC_008570.1	RefSeq	CDS	810083	811306	.	-	0	ID=cds728;Parent=gene758;Dbxref=Genbank:YP_855299.1,GeneID:4488111;Name=YP_855299.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=two-component system sensor kinase;protein_id=YP_855299.1;transl_table=11
NC_008570.1	RefSeq	gene	811363	812043	.	-	.	ID=gene759;Dbxref=GeneID:4488112;Name=AHA_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0759
NC_008570.1	RefSeq	CDS	811363	812043	.	-	0	ID=cds729;Parent=gene759;Dbxref=Genbank:YP_855300.1,GeneID:4488112;Name=YP_855300.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein CpxR;protein_id=YP_855300.1;transl_table=11
NC_008570.1	RefSeq	gene	812205	813365	.	+	.	ID=gene760;Dbxref=GeneID:4488113;Name=AHA_0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0760
NC_008570.1	RefSeq	CDS	812205	813365	.	+	0	ID=cds730;Parent=gene760;Dbxref=Genbank:YP_855301.1,GeneID:4488113;Name=YP_855301.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=macrolide-specific efflux protein MacA;protein_id=YP_855301.1;transl_table=11
NC_008570.1	RefSeq	gene	813368	815314	.	+	.	ID=gene761;Dbxref=GeneID:4488114;Name=AHA_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0761
NC_008570.1	RefSeq	CDS	813368	815314	.	+	0	ID=cds731;Parent=gene761;Dbxref=Genbank:YP_855302.1,GeneID:4488114;Name=YP_855302.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF02687;gbkey=CDS;product=macrolide-specific ABC-type efflux carrier;protein_id=YP_855302.1;transl_table=11
NC_008570.1	RefSeq	gene	815619	816455	.	-	.	ID=gene762;Dbxref=GeneID:4488115;Name=AHA_0762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0762
NC_008570.1	RefSeq	CDS	815619	816455	.	-	0	ID=cds732;Parent=gene762;Dbxref=Genbank:YP_855303.1,GeneID:4488115;Name=YP_855303.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein;protein_id=YP_855303.1;transl_table=11
NC_008570.1	RefSeq	gene	816452	817213	.	-	.	ID=gene763;Dbxref=GeneID:4488116;Name=AHA_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0763
NC_008570.1	RefSeq	CDS	816452	817213	.	-	0	ID=cds733;Parent=gene763;Dbxref=Genbank:YP_855304.1,GeneID:4488116;Name=YP_855304.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter;protein_id=YP_855304.1;transl_table=11
NC_008570.1	RefSeq	gene	817210	817872	.	-	.	ID=gene764;Dbxref=GeneID:4488117;Name=AHA_0764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0764
NC_008570.1	RefSeq	CDS	817210	817872	.	-	0	ID=cds734;Parent=gene764;Dbxref=Genbank:YP_855305.1,GeneID:4488117;Name=YP_855305.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=glutamine transport system permease GlnP;protein_id=YP_855305.1;transl_table=11
NC_008570.1	RefSeq	gene	817947	818612	.	-	.	ID=gene765;Dbxref=GeneID:4488118;Name=AHA_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0765
NC_008570.1	RefSeq	CDS	817947	818612	.	-	0	ID=cds735;Parent=gene765;Dbxref=Genbank:YP_855306.1,GeneID:4488118;Name=YP_855306.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=glutamine/glutamate ABC transporter permease;protein_id=YP_855306.1;transl_table=11
NC_008570.1	RefSeq	gene	818609	819820	.	-	.	ID=gene766;Dbxref=GeneID:4488119;Name=AHA_0766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0766
NC_008570.1	RefSeq	CDS	818609	819820	.	-	0	ID=cds736;Parent=gene766;Dbxref=Genbank:YP_855307.1,GeneID:4488119;Name=YP_855307.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;product=threonine synthase;protein_id=YP_855307.1;transl_table=11
NC_008570.1	RefSeq	gene	820056	822203	.	+	.	ID=gene767;Dbxref=GeneID:4488120;Name=AHA_0767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0767
NC_008570.1	RefSeq	CDS	820056	822203	.	+	0	ID=cds737;Parent=gene767;Dbxref=Genbank:YP_855308.1,GeneID:4488120;Name=YP_855308.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF02897;gbkey=CDS;product=prolyl endopeptidase;protein_id=YP_855308.1;transl_table=11
NC_008570.1	RefSeq	gene	822407	824566	.	+	.	ID=gene768;Dbxref=GeneID:4488121;Name=AHA_0768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0768
NC_008570.1	RefSeq	CDS	822407	824566	.	+	0	ID=cds738;Parent=gene768;Dbxref=Genbank:YP_855310.1,GeneID:4488121;Name=YP_855310.1;Note=identified by match to protein family HMM PF05170;gbkey=CDS;product=AsmA protein;protein_id=YP_855310.1;transl_table=11
NC_008570.1	RefSeq	gene	824742	825278	.	+	.	ID=gene769;Dbxref=GeneID:4488122;Name=AHA_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0769
NC_008570.1	RefSeq	CDS	824742	825278	.	+	0	ID=cds739;Parent=gene769;Dbxref=Genbank:YP_855311.1,GeneID:4488122;Name=YP_855311.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855311.1;transl_table=11
NC_008570.1	RefSeq	gene	825334	826068	.	+	.	ID=gene770;Dbxref=GeneID:4487930;Name=AHA_0770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0770
NC_008570.1	RefSeq	CDS	825334	826068	.	+	0	ID=cds740;Parent=gene770;Dbxref=Genbank:YP_855312.1,GeneID:4487930;Name=YP_855312.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=YP_855312.1;transl_table=11
NC_008570.1	RefSeq	gene	826119	829052	.	-	.	ID=gene771;Dbxref=GeneID:4487931;Name=AHA_0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0771
NC_008570.1	RefSeq	CDS	826119	829052	.	-	0	ID=cds741;Parent=gene771;Dbxref=Genbank:YP_855313.1,GeneID:4487931;Name=YP_855313.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase;protein_id=YP_855313.1;transl_table=11
NC_008570.1	RefSeq	gene	829124	829564	.	-	.	ID=gene772;Dbxref=GeneID:4487932;Name=AHA_0772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0772
NC_008570.1	RefSeq	CDS	829124	829564	.	-	0	ID=cds742;Parent=gene772;Dbxref=Genbank:YP_855314.1,GeneID:4487932;Name=YP_855314.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855314.1;transl_table=11
NC_008570.1	RefSeq	gene	829745	830995	.	-	.	ID=gene773;Dbxref=GeneID:4487933;Name=AHA_0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0773
NC_008570.1	RefSeq	CDS	829745	830995	.	-	0	ID=cds743;Parent=gene773;Dbxref=Genbank:YP_855315.1,GeneID:4487933;Name=YP_855315.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855315.1;transl_table=11
NC_008570.1	RefSeq	gene	831027	831848	.	+	.	ID=gene774;Dbxref=GeneID:4487934;Name=AHA_0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0774
NC_008570.1	RefSeq	CDS	831027	831848	.	+	0	ID=cds744;Parent=gene774;Dbxref=Genbank:YP_855316.1,GeneID:4487934;Name=YP_855316.1;Note=identified by match to protein family HMM PF00520%3B match to protein family HMM PF07885;gbkey=CDS;product=ion transporter;protein_id=YP_855316.1;transl_table=11
NC_008570.1	RefSeq	gene	832001	832606	.	+	.	ID=gene775;Dbxref=GeneID:4487935;Name=AHA_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0775
NC_008570.1	RefSeq	CDS	832001	832606	.	+	0	ID=cds745;Parent=gene775;Dbxref=Genbank:YP_855317.1,GeneID:4487935;Name=YP_855317.1;Note=identified by match to protein family HMM PF06347;gbkey=CDS;product=arylsulfatase;protein_id=YP_855317.1;transl_table=11
NC_008570.1	RefSeq	gene	832876	836040	.	+	.	ID=gene776;Dbxref=GeneID:4487936;Name=AHA_0776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0776
NC_008570.1	RefSeq	CDS	832876	836040	.	+	0	ID=cds746;Parent=gene776;Dbxref=Genbank:YP_855318.1,GeneID:4487936;Name=YP_855318.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain;gbkey=CDS;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=YP_855318.1;transl_table=11
NC_008570.1	RefSeq	gene	836241	837020	.	+	.	ID=gene777;Dbxref=GeneID:4487937;Name=AHA_0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0777
NC_008570.1	RefSeq	CDS	836241	837020	.	+	0	ID=cds747;Parent=gene777;Dbxref=Genbank:YP_855319.1,GeneID:4487937;Name=YP_855319.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=NUDIX family hydrolase;protein_id=YP_855319.1;transl_table=11
NC_008570.1	RefSeq	gene	837040	838230	.	+	.	ID=gene778;Dbxref=GeneID:4487938;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AHA_0778
NC_008570.1	RefSeq	CDS	837040	838230	.	+	0	ID=cds748;Parent=gene778;Dbxref=Genbank:YP_855320.1,GeneID:4487938;Name=YP_855320.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=YP_855320.1;transl_table=11
NC_008570.1	RefSeq	gene	838411	839340	.	+	.	ID=gene779;Dbxref=GeneID:4487939;Name=AHA_0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0779
NC_008570.1	RefSeq	CDS	838411	839340	.	+	0	ID=cds749;Parent=gene779;Dbxref=Genbank:YP_855321.1,GeneID:4487939;Name=YP_855321.1;Note=identified by match to protein family HMM PF00480;gbkey=CDS;product=ROK family protein;protein_id=YP_855321.1;transl_table=11
NC_008570.1	RefSeq	gene	839390	840400	.	+	.	ID=gene780;Dbxref=GeneID:4487940;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AHA_0780
NC_008570.1	RefSeq	CDS	839390	840400	.	+	0	ID=cds750;Parent=gene780;Dbxref=Genbank:YP_855322.1,GeneID:4487940;Name=YP_855322.1;Note=NAD-dependent%3B catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate;gbkey=CDS;gene=epd;product=erythrose 4-phosphate dehydrogenase;protein_id=YP_855322.1;transl_table=11
NC_008570.1	RefSeq	gene	840463	841626	.	+	.	ID=gene781;Dbxref=GeneID:4487941;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AHA_0781
NC_008570.1	RefSeq	CDS	840463	841626	.	+	0	ID=cds751;Parent=gene781;Dbxref=Genbank:YP_855323.1,GeneID:4487941;Name=YP_855323.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=YP_855323.1;transl_table=11
NC_008570.1	RefSeq	gene	841743	842822	.	+	.	ID=gene782;Dbxref=GeneID:4487942;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AHA_0782
NC_008570.1	RefSeq	CDS	841743	842822	.	+	0	ID=cds752;Parent=gene782;Dbxref=Genbank:YP_855324.1,GeneID:4487942;Name=YP_855324.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;gene=fbaA;product=fructose-bisphosphate aldolase;protein_id=YP_855324.1;transl_table=11
NC_008570.1	RefSeq	gene	843043	844347	.	+	.	ID=gene783;Dbxref=GeneID:4487943;Name=AHA_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0783
NC_008570.1	RefSeq	CDS	843043	844347	.	+	0	ID=cds753;Parent=gene783;Dbxref=Genbank:YP_855326.1,GeneID:4487943;Name=YP_855326.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;product=oxidoreductase;protein_id=YP_855326.1;transl_table=11
NC_008570.1	RefSeq	gene	844532	844945	.	-	.	ID=gene784;Dbxref=GeneID:4487944;Name=AHA_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0784
NC_008570.1	RefSeq	CDS	844532	844945	.	-	0	ID=cds754;Parent=gene784;Dbxref=Genbank:YP_855327.1,GeneID:4487944;Name=YP_855327.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855327.1;transl_table=11
NC_008570.1	RefSeq	gene	845070	846842	.	-	.	ID=gene785;Dbxref=GeneID:4487945;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AHA_0785
NC_008570.1	RefSeq	CDS	845070	846842	.	-	0	ID=cds755;Parent=gene785;Dbxref=Genbank:YP_855328.1,GeneID:4487945;Name=YP_855328.1;Note=synonymous name: protein-disulfide reductase DsbD%3B identified by similarity to SP:P36655%3B match to protein family HMM PF02683;gbkey=CDS;gene=dsbD;product=thiol:disulfide interchange protein DsbD;protein_id=YP_855328.1;transl_table=11
NC_008570.1	RefSeq	gene	846839	847246	.	-	.	ID=gene786;Dbxref=GeneID:4487946;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AHA_0786
NC_008570.1	RefSeq	CDS	846839	847246	.	-	0	ID=cds756;Parent=gene786;Dbxref=Genbank:YP_855329.1,GeneID:4487946;Name=YP_855329.1;Note=identified by match to protein family HMM PF03091;gbkey=CDS;gene=cutA;product=divalent-cation tolerance protein CutA;protein_id=YP_855329.1;transl_table=11
NC_008570.1	RefSeq	gene	847323	847691	.	+	.	ID=gene787;Dbxref=GeneID:4487947;Name=AHA_0787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0787
NC_008570.1	RefSeq	CDS	847323	847691	.	+	0	ID=cds757;Parent=gene787;Dbxref=Genbank:YP_855330.1,GeneID:4487947;Name=YP_855330.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855330.1;transl_table=11
NC_008570.1	RefSeq	gene	847787	848224	.	-	.	ID=gene788;Dbxref=GeneID:4487948;Name=AHA_0788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0788
NC_008570.1	RefSeq	CDS	847787	848224	.	-	0	ID=cds758;Parent=gene788;Dbxref=Genbank:YP_855331.1,GeneID:4487948;Name=YP_855331.1;Note=identified by match to protein family HMM PF05232;gbkey=CDS;product=transmembrane pair;protein_id=YP_855331.1;transl_table=11
NC_008570.1	RefSeq	gene	848349	849227	.	+	.	ID=gene789;Dbxref=GeneID:4487290;Name=AHA_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0789
NC_008570.1	RefSeq	CDS	848349	849227	.	+	0	ID=cds759;Parent=gene789;Dbxref=Genbank:YP_855332.1,GeneID:4487290;Name=YP_855332.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=regulatory protein LysR;protein_id=YP_855332.1;transl_table=11
NC_008570.1	RefSeq	gene	849241	850146	.	-	.	ID=gene790;Dbxref=GeneID:4487291;Name=AHA_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0790
NC_008570.1	RefSeq	CDS	849241	850146	.	-	0	ID=cds760;Parent=gene790;Dbxref=Genbank:YP_855333.1,GeneID:4487291;Name=YP_855333.1;Note=identified by match to protein family HMM PF01571;gbkey=CDS;product=chain A%2C Ygfz protein;protein_id=YP_855333.1;transl_table=11
NC_008570.1	RefSeq	gene	850260	850529	.	+	.	ID=gene791;Dbxref=GeneID:4487292;Name=AHA_0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0791
NC_008570.1	RefSeq	CDS	850260	850529	.	+	0	ID=cds761;Parent=gene791;Dbxref=Genbank:YP_855334.1,GeneID:4487292;Name=YP_855334.1;Note=identified by match to protein family HMM PF03937;gbkey=CDS;product=hypothetical protein;protein_id=YP_855334.1;transl_table=11
NC_008570.1	RefSeq	gene	850549	850926	.	+	.	ID=gene792;Dbxref=GeneID:4487293;Name=AHA_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0792
NC_008570.1	RefSeq	CDS	850549	850926	.	+	0	ID=cds762;Parent=gene792;Dbxref=Genbank:YP_855335.1,GeneID:4487293;Name=YP_855335.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855335.1;transl_table=11
NC_008570.1	RefSeq	gene	851151	852758	.	-	.	ID=gene793;Dbxref=GeneID:4487294;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AHA_0793
NC_008570.1	RefSeq	CDS	851151	852758	.	-	0	ID=cds763;Parent=gene793;Dbxref=Genbank:YP_855336.1,GeneID:4487294;Name=YP_855336.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00551;gbkey=CDS;gene=nadB;product=L-aspartate oxidase;protein_id=YP_855336.1;transl_table=11
NC_008570.1	RefSeq	gene	852941	853522	.	+	.	ID=gene794;Dbxref=GeneID:4487295;Name=AHA_0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0794
NC_008570.1	RefSeq	CDS	852941	853522	.	+	0	ID=cds764;Parent=gene794;Dbxref=Genbank:YP_855337.1,GeneID:4487295;Name=YP_855337.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor RpoE;protein_id=YP_855337.1;transl_table=11
NC_008570.1	RefSeq	gene	853545	854135	.	+	.	ID=gene795;Dbxref=GeneID:4487296;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AHA_0795
NC_008570.1	RefSeq	CDS	853545	854135	.	+	0	ID=cds765;Parent=gene795;Dbxref=Genbank:YP_855338.1,GeneID:4487296;Name=YP_855338.1;Note=identified by similarity to SP:P38106%3B match to protein family HMM PF03872%3B match to protein family HMM PF03873;gbkey=CDS;gene=rseA;product=sigma-E factor negative regulatory protein;protein_id=YP_855338.1;transl_table=11
NC_008570.1	RefSeq	gene	854071	855135	.	+	.	ID=gene796;Dbxref=GeneID:4487297;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AHA_0796
NC_008570.1	RefSeq	CDS	854071	855135	.	+	0	ID=cds766;Parent=gene796;Dbxref=Genbank:YP_855339.1,GeneID:4487297;Name=YP_855339.1;Note=identified by similarity to SP:P46186%3B match to protein family HMM PF03888;gbkey=CDS;gene=rseB;product=sigma-E factor regulatory protein RseB;protein_id=YP_855339.1;transl_table=11
NC_008570.1	RefSeq	gene	855229	855690	.	+	.	ID=gene797;Dbxref=GeneID:4487298;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AHA_0797
NC_008570.1	RefSeq	CDS	855229	855690	.	+	0	ID=cds767;Parent=gene797;Dbxref=Genbank:YP_855340.1,GeneID:4487298;Name=YP_855340.1;Note=identified by similarity to SP:P46187%3B match to protein family HMM PF04246;gbkey=CDS;gene=rseC;product=sigma-E factor regulatory protein RseC;protein_id=YP_855340.1;transl_table=11
NC_008570.1	RefSeq	gene	855811	857604	.	+	.	ID=gene798;Dbxref=GeneID:4487299;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AHA_0798
NC_008570.1	RefSeq	CDS	855811	857604	.	+	0	ID=cds768;Parent=gene798;Dbxref=Genbank:YP_855341.1,GeneID:4487299;Name=YP_855341.1;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=YP_855341.1;transl_table=11
NC_008570.1	RefSeq	gene	857608	858531	.	+	.	ID=gene799;Dbxref=GeneID:4487300;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AHA_0799
NC_008570.1	RefSeq	CDS	857608	858531	.	+	0	ID=cds769;Parent=gene799;Dbxref=Genbank:YP_855342.1,GeneID:4487300;Name=YP_855342.1;Note=identified by similarity to SP:P00803%3B match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB;product=signal peptidase I;protein_id=YP_855342.1;transl_table=11
NC_008570.1	RefSeq	gene	858532	859203	.	+	.	ID=gene800;Dbxref=GeneID:4487301;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AHA_0800
NC_008570.1	RefSeq	CDS	858532	859203	.	+	0	ID=cds770;Parent=gene800;Dbxref=Genbank:YP_855343.1,GeneID:4487301;Name=YP_855343.1;Note=identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=YP_855343.1;transl_table=11
NC_008570.1	RefSeq	gene	859200	860099	.	+	.	ID=gene801;Dbxref=GeneID:4487302;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AHA_0801
NC_008570.1	RefSeq	CDS	859200	860099	.	+	0	ID=cds771;Parent=gene801;Dbxref=Genbank:YP_855344.1,GeneID:4487302;Name=YP_855344.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436%3B match to protein family HMM TIGR00650;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=YP_855344.1;transl_table=11
NC_008570.1	RefSeq	gene	860100	860807	.	+	.	ID=gene802;Dbxref=GeneID:4487303;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AHA_0802
NC_008570.1	RefSeq	CDS	860100	860807	.	+	0	ID=cds772;Parent=gene802;Dbxref=Genbank:YP_855345.1,GeneID:4487303;Name=YP_855345.1;Note=identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=YP_855345.1;transl_table=11
NC_008570.1	RefSeq	gene	860970	861707	.	+	.	ID=gene803;Dbxref=GeneID:4487304;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AHA_0803
NC_008570.1	RefSeq	CDS	860970	861707	.	+	0	ID=cds773;Parent=gene803;Dbxref=Genbank:YP_855346.1,GeneID:4487304;Name=YP_855346.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;gene=pdxJ;product=pyridoxine 5'-phosphate synthase;protein_id=YP_855346.1;transl_table=11
NC_008570.1	RefSeq	gene	861793	863703	.	-	.	ID=gene804;Dbxref=GeneID:4487305;Name=AHA_0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0804
NC_008570.1	RefSeq	CDS	861793	863703	.	-	0	ID=cds774;Parent=gene804;Dbxref=Genbank:YP_855347.1,GeneID:4487305;Name=YP_855347.1;gbkey=CDS;product=enterotoxin;protein_id=YP_855347.1;transl_table=11
NC_008570.1	RefSeq	gene	863806	864660	.	-	.	ID=gene805;Dbxref=GeneID:4487306;Name=AHA_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0805
NC_008570.1	RefSeq	CDS	863806	864660	.	-	0	ID=cds775;Parent=gene805;Dbxref=Genbank:YP_855348.1,GeneID:4487306;Name=YP_855348.1;Note=identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01858;gbkey=CDS;product=tagatose bisphosphate family class II aldolase;protein_id=YP_855348.1;transl_table=11
NC_008570.1	RefSeq	gene	864651	865850	.	-	.	ID=gene806;Dbxref=GeneID:4487307;Name=nagA-1;gbkey=Gene;gene=nagA-1;gene_biotype=protein_coding;locus_tag=AHA_0806
NC_008570.1	RefSeq	CDS	864651	865850	.	-	0	ID=cds776;Parent=gene806;Dbxref=Genbank:YP_855349.1,GeneID:4487307;Name=YP_855349.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00221;gbkey=CDS;gene=nagA-1;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_855349.1;transl_table=11
NC_008570.1	RefSeq	gene	865851	866348	.	-	.	ID=gene807;Dbxref=GeneID:4487308;Name=AHA_0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0807
NC_008570.1	RefSeq	CDS	865851	866348	.	-	0	ID=cds777;Parent=gene807;Dbxref=Genbank:YP_855350.1,GeneID:4487308;Name=YP_855350.1;Note=identified by match to protein family HMM PF03610;gbkey=CDS;product=N-acetyl-galactosamine;protein_id=YP_855350.1;transl_table=11
NC_008570.1	RefSeq	gene	866332	867210	.	-	.	ID=gene808;Dbxref=GeneID:4487309;Name=AHA_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0808
NC_008570.1	RefSeq	CDS	866332	867210	.	-	0	ID=cds778;Parent=gene808;Dbxref=Genbank:YP_855351.1,GeneID:4487309;Name=YP_855351.1;Note=identified by match to protein family HMM PF03613;gbkey=CDS;product=N-acetylgalactosamine permease IID component;protein_id=YP_855351.1;transl_table=11
NC_008570.1	RefSeq	gene	867200	867976	.	-	.	ID=gene809;Dbxref=GeneID:4489289;Name=AHA_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0809
NC_008570.1	RefSeq	CDS	867200	867976	.	-	0	ID=cds779;Parent=gene809;Dbxref=Genbank:YP_855352.1,GeneID:4489289;Name=YP_855352.1;Note=identified by match to protein family HMM PF03609;gbkey=CDS;product=N-acetylgalactosamine permease IIC component 1;protein_id=YP_855352.1;transl_table=11
NC_008570.1	RefSeq	gene	867992	868465	.	-	.	ID=gene810;Dbxref=GeneID:4489290;Name=AHA_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0810
NC_008570.1	RefSeq	CDS	867992	868465	.	-	0	ID=cds780;Parent=gene810;Dbxref=Genbank:YP_855353.1,GeneID:4489290;Name=YP_855353.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS system N-acetylgalactosamine-specific transporter subunit IIB;protein_id=YP_855353.1;transl_table=11
NC_008570.1	RefSeq	gene	868465	869634	.	-	.	ID=gene811;Dbxref=GeneID:4489291;Name=AHA_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0811
NC_008570.1	RefSeq	CDS	868465	869634	.	-	0	ID=cds781;Parent=gene811;Dbxref=Genbank:YP_855354.1,GeneID:4489291;Name=YP_855354.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR02815;gbkey=CDS;product=tagatose-6-phosphate ketose/aldose isomerase;protein_id=YP_855354.1;transl_table=11
NC_008570.1	RefSeq	gene	869647	870960	.	-	.	ID=gene812;Dbxref=GeneID:4489292;Name=AHA_0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0812
NC_008570.1	RefSeq	CDS	869647	870960	.	-	0	ID=cds782;Parent=gene812;Dbxref=Genbank:YP_855355.1,GeneID:4489292;Name=YP_855355.1;Note=identified by match to protein family HMM PF08013%3B match to protein family HMM TIGR02810;gbkey=CDS;product=D-tagatose-bisphosphate aldolase non-catalytic subunit;protein_id=YP_855355.1;transl_table=11
NC_008570.1	RefSeq	gene	871233	872030	.	+	.	ID=gene813;Dbxref=GeneID:4489293;Name=AHA_0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0813
NC_008570.1	RefSeq	CDS	871233	872030	.	+	0	ID=cds783;Parent=gene813;Dbxref=Genbank:YP_855356.1,GeneID:4489293;Name=YP_855356.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DNA-binding transcriptional regulator AgaR;protein_id=YP_855356.1;transl_table=11
NC_008570.1	RefSeq	gene	872100	873020	.	-	.	ID=gene814;Dbxref=GeneID:4489294;Name=AHA_0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0814
NC_008570.1	RefSeq	CDS	872100	873020	.	-	0	ID=cds784;Parent=gene814;Dbxref=Genbank:YP_855357.1,GeneID:4489294;Name=YP_855357.1;Note=identified by match to protein family HMM PF01471%3B match to protein family HMM PF01510;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_855357.1;transl_table=11
NC_008570.1	RefSeq	gene	873024	873503	.	-	.	ID=gene815;Dbxref=GeneID:4489295;Name=AHA_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0815
NC_008570.1	RefSeq	CDS	873024	873503	.	-	0	ID=cds785;Parent=gene815;Dbxref=Genbank:YP_855358.1,GeneID:4489295;Name=YP_855358.1;Note=identified by match to protein family HMM PF07308;gbkey=CDS;product=hypothetical protein;protein_id=YP_855358.1;transl_table=11
NC_008570.1	RefSeq	gene	873576	876287	.	-	.	ID=gene816;Dbxref=GeneID:4489296;Name=AHA_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0816
NC_008570.1	RefSeq	CDS	873576	876287	.	-	0	ID=cds786;Parent=gene816;Dbxref=Genbank:YP_855359.1,GeneID:4489296;Name=YP_855359.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=hybrid sensory histidine kinase BarA;protein_id=YP_855359.1;transl_table=11
NC_008570.1	RefSeq	gene	876441	877763	.	+	.	ID=gene817;Dbxref=GeneID:4489297;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=AHA_0817
NC_008570.1	RefSeq	CDS	876441	877763	.	+	0	ID=cds787;Parent=gene817;Dbxref=Genbank:YP_855360.1,GeneID:4489297;Name=YP_855360.1;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S];gbkey=CDS;gene=rumA;product=23S rRNA 5-methyluridine methyltransferase;protein_id=YP_855360.1;transl_table=11
NC_008570.1	RefSeq	gene	878030	880240	.	+	.	ID=gene818;Dbxref=GeneID:4489298;Name=AHA_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0818
NC_008570.1	RefSeq	CDS	878030	880240	.	+	0	ID=cds788;Parent=gene818;Dbxref=Genbank:YP_855361.1,GeneID:4489298;Name=YP_855361.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=YP_855361.1;transl_table=11
NC_008570.1	RefSeq	gene	880325	881122	.	+	.	ID=gene819;Dbxref=GeneID:4489299;Name=AHA_0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0819
NC_008570.1	RefSeq	CDS	880325	881122	.	+	0	ID=cds789;Parent=gene819;Dbxref=Genbank:YP_855362.1,GeneID:4489299;Name=YP_855362.1;Note=identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444;gbkey=CDS;product=MazG family protein;protein_id=YP_855362.1;transl_table=11
NC_008570.1	RefSeq	gene	881264	882901	.	+	.	ID=gene820;Dbxref=GeneID:4489300;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AHA_0820
NC_008570.1	RefSeq	CDS	881264	882901	.	+	0	ID=cds790;Parent=gene820;Dbxref=Genbank:YP_855363.1,GeneID:4489300;Name=YP_855363.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=YP_855363.1;transl_table=11
NC_008570.1	RefSeq	gene	882991	884292	.	+	.	ID=gene821;Dbxref=GeneID:4489301;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AHA_0821
NC_008570.1	RefSeq	CDS	882991	884292	.	+	0	ID=cds791;Parent=gene821;Dbxref=Genbank:YP_855364.1,GeneID:4489301;Name=YP_855364.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=YP_855364.1;transl_table=11
NC_008570.1	RefSeq	gene	884471	884788	.	+	.	ID=gene822;Dbxref=GeneID:4489302;Name=AHA_0822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0822
NC_008570.1	RefSeq	CDS	884471	884788	.	+	0	ID=cds792;Parent=gene822;Dbxref=Genbank:YP_855365.1,GeneID:4489302;Name=YP_855365.1;Note=identified by similarity to SP:P0A6S5%3B match to protein family HMM PF04977;gbkey=CDS;product=cell division protein;protein_id=YP_855365.1;transl_table=11
NC_008570.1	RefSeq	gene	884781	885512	.	+	.	ID=gene823;Dbxref=GeneID:4489303;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AHA_0823
NC_008570.1	RefSeq	CDS	884781	885512	.	+	0	ID=cds793;Parent=gene823;Dbxref=Genbank:YP_855366.1,GeneID:4489303;Name=YP_855366.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;gene=ispD;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_855366.1;transl_table=11
NC_008570.1	RefSeq	gene	885509	885985	.	+	.	ID=gene824;Dbxref=GeneID:4489304;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AHA_0824
NC_008570.1	RefSeq	CDS	885509	885985	.	+	0	ID=cds794;Parent=gene824;Dbxref=Genbank:YP_855367.1,GeneID:4489304;Name=YP_855367.1;Note=identified by match to protein family HMM PF02542%3B match to protein family HMM TIGR00151;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=YP_855367.1;transl_table=11
NC_008570.1	RefSeq	gene	885985	887043	.	+	.	ID=gene825;Dbxref=GeneID:4489305;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AHA_0825
NC_008570.1	RefSeq	CDS	885985	887043	.	+	0	ID=cds795;Parent=gene825;Dbxref=Genbank:YP_855368.1,GeneID:4489305;Name=YP_855368.1;Note=identified by match to protein family HMM PF01142%3B match to protein family HMM TIGR00094;gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=YP_855368.1;transl_table=11
NC_008570.1	RefSeq	gene	887024	887785	.	+	.	ID=gene826;Dbxref=GeneID:4489306;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AHA_0826
NC_008570.1	RefSeq	CDS	887024	887785	.	+	0	ID=cds796;Parent=gene826;Dbxref=Genbank:YP_855369.1,GeneID:4489306;Name=YP_855369.1;Note=catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate;gbkey=CDS;gene=surE;product=stationary phase survival protein SurE;protein_id=YP_855369.1;transl_table=11
NC_008570.1	RefSeq	gene	887790	888407	.	+	.	ID=gene827;Dbxref=GeneID:4489307;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AHA_0827
NC_008570.1	RefSeq	CDS	887790	888407	.	+	0	ID=cds797;Parent=gene827;Dbxref=Genbank:YP_855370.1,GeneID:4489307;Name=YP_855370.1;Note=identified by match to protein family HMM PF01135%3B match to protein family HMM TIGR00080;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=YP_855370.1;transl_table=11
NC_008570.1	RefSeq	gene	888410	888985	.	+	.	ID=gene828;Dbxref=GeneID:4487115;Name=AHA_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0828
NC_008570.1	RefSeq	CDS	888410	888985	.	+	0	ID=cds798;Parent=gene828;Dbxref=Genbank:YP_855371.1,GeneID:4487115;Name=YP_855371.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855371.1;transl_table=11
NC_008570.1	RefSeq	gene	888924	890036	.	+	.	ID=gene829;Dbxref=GeneID:4487116;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AHA_0829
NC_008570.1	RefSeq	CDS	888924	890036	.	+	0	ID=cds799;Parent=gene829;Dbxref=Genbank:YP_855372.1,GeneID:4487116;Name=YP_855372.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551;gbkey=CDS;gene=nlpD;product=lipoprotein NlpD;protein_id=YP_855372.1;transl_table=11
NC_008570.1	RefSeq	gene	890084	891067	.	+	.	ID=gene830;Dbxref=GeneID:4487117;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AHA_0830
NC_008570.1	RefSeq	CDS	890084	891067	.	+	0	ID=cds800;Parent=gene830;Dbxref=Genbank:YP_855373.1,GeneID:4487117;Name=YP_855373.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02394%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02942;gbkey=CDS;gene=rpoS;product=RNA polymerase sigma factor RpoS;protein_id=YP_855373.1;transl_table=11
NC_008570.1	RefSeq	gene	891152	892165	.	-	.	ID=gene831;Dbxref=GeneID:4487118;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;locus_tag=AHA_0831
NC_008570.1	RefSeq	CDS	891152	892165	.	-	0	ID=cds801;Parent=gene831;Dbxref=Genbank:YP_855374.1,GeneID:4487118;Name=YP_855374.1;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;gbkey=CDS;gene=gcp;product=DNA-binding/iron metalloprotein/AP endonuclease;protein_id=YP_855374.1;transl_table=11
NC_008570.1	RefSeq	gene	892345	892560	.	+	.	ID=gene832;Dbxref=GeneID:4487119;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AHA_0832
NC_008570.1	RefSeq	CDS	892345	892560	.	+	0	ID=cds802;Parent=gene832;Dbxref=Genbank:YP_855375.1,GeneID:4487119;Name=YP_855375.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=YP_855375.1;transl_table=11
NC_008570.1	RefSeq	gene	892575	893018	.	+	.	ID=gene833;Dbxref=GeneID:4487120;Name=AHA_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0833
NC_008570.1	RefSeq	CDS	892575	893018	.	+	0	ID=cds803;Parent=gene833;Dbxref=Genbank:YP_855376.1,GeneID:4487120;Name=YP_855376.1;Note=identified by match to protein family HMM PF02637;gbkey=CDS;product=GatB/YqeY domain-containing protein;protein_id=YP_855376.1;transl_table=11
NC_008570.1	RefSeq	gene	893107	894894	.	+	.	ID=gene834;Dbxref=GeneID:4487121;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AHA_0834
NC_008570.1	RefSeq	CDS	893107	894894	.	+	0	ID=cds804;Parent=gene834;Dbxref=Genbank:YP_855377.1,GeneID:4487121;Name=YP_855377.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM TIGR01391;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=YP_855377.1;transl_table=11
NC_008570.1	RefSeq	gene	895117	896973	.	+	.	ID=gene835;Dbxref=GeneID:4487122;Name=AHA_0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0835
NC_008570.1	RefSeq	CDS	895117	896973	.	+	0	ID=cds805;Parent=gene835;Dbxref=Genbank:YP_855378.1,GeneID:4487122;Name=YP_855378.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF04546%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=YP_855378.1;transl_table=11
NC_008570.1	RefSeq	gene	897169	897245	.	+	.	ID=gene836;Dbxref=GeneID:4487123;Name=AHA_0836;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0836
NC_008570.1	RefSeq	tRNA	897169	897245	.	+	.	ID=rna30;Parent=gene836;Dbxref=GeneID:4487123;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	897169	897245	.	+	.	ID=id31;Parent=rna30;Dbxref=GeneID:4487123;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	897701	900277	.	-	.	ID=gene837;Dbxref=GeneID:4487124;Name=AHA_0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0837
NC_008570.1	RefSeq	CDS	897701	900277	.	-	0	ID=cds806;Parent=gene837;Dbxref=Genbank:YP_855379.1,GeneID:4487124;Name=YP_855379.1;Note=identified by similarity to SP:P41131%3B match to protein family HMM PF00128%3B match to protein family HMM PF00801%3B match to protein family HMM PF02806;gbkey=CDS;product=alpha-amylase;protein_id=YP_855379.1;transl_table=11
NC_008570.1	RefSeq	gene	900553	901107	.	-	.	ID=gene838;Dbxref=GeneID:4487125;Name=AHA_0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0838
NC_008570.1	RefSeq	CDS	900553	901107	.	-	0	ID=cds807;Parent=gene838;Dbxref=Genbank:YP_855380.1,GeneID:4487125;Name=YP_855380.1;Note=identified by match to protein family HMM PF01292;gbkey=CDS;product=cytochrome B;protein_id=YP_855380.1;transl_table=11
NC_008570.1	RefSeq	gene	901088	901462	.	-	.	ID=gene839;Dbxref=GeneID:4487126;Name=AHA_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0839
NC_008570.1	RefSeq	CDS	901088	901462	.	-	0	ID=cds808;Parent=gene839;Dbxref=Genbank:YP_855381.1,GeneID:4487126;Name=YP_855381.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855381.1;transl_table=11
NC_008570.1	RefSeq	gene	901727	903016	.	-	.	ID=gene840;Dbxref=GeneID:4487127;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AHA_0840
NC_008570.1	RefSeq	CDS	901727	903016	.	-	0	ID=cds809;Parent=gene840;Dbxref=Genbank:YP_855382.1,GeneID:4487127;Name=YP_855382.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=YP_855382.1;transl_table=11
NC_008570.1	RefSeq	gene	903127	904719	.	-	.	ID=gene841;Dbxref=GeneID:4487128;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AHA_0841
NC_008570.1	RefSeq	CDS	903127	904719	.	-	0	ID=cds810;Parent=gene841;Dbxref=Genbank:YP_855383.1,GeneID:4487128;Name=YP_855383.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=YP_855383.1;transl_table=11
NC_008570.1	RefSeq	gene	905131	905568	.	+	.	ID=gene842;Dbxref=GeneID:4487129;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AHA_0842
NC_008570.1	RefSeq	CDS	905131	905568	.	+	0	ID=cds811;Parent=gene842;Dbxref=Genbank:YP_855384.1,GeneID:4487129;Name=YP_855384.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=zinc-responsive transcriptional regulator;protein_id=YP_855384.1;transl_table=11
NC_008570.1	RefSeq	gene	905558	906094	.	+	.	ID=gene843;Dbxref=GeneID:4487130;Name=AHA_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0843
NC_008570.1	RefSeq	CDS	905558	906094	.	+	0	ID=cds812;Parent=gene843;Dbxref=Genbank:YP_855385.1,GeneID:4487130;Name=YP_855385.1;Note=identified by match to protein family HMM PF01872;gbkey=CDS;product=riboflavin biosynthesis protein RibD domain-containing protein;protein_id=YP_855385.1;transl_table=11
NC_008570.1	RefSeq	gene	906075	906440	.	+	.	ID=gene844;Dbxref=GeneID:4487131;Name=AHA_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0844
NC_008570.1	RefSeq	CDS	906075	906440	.	+	0	ID=cds813;Parent=gene844;Dbxref=Genbank:YP_855386.1,GeneID:4487131;Name=YP_855386.1;Note=identified by match to protein family HMM PF03889;gbkey=CDS;product=hypothetical protein;protein_id=YP_855386.1;transl_table=11
NC_008570.1	RefSeq	gene	906557	907702	.	-	.	ID=gene845;Dbxref=GeneID:4487132;Name=AHA_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0845
NC_008570.1	RefSeq	CDS	906557	907702	.	-	0	ID=cds814;Parent=gene845;Dbxref=Genbank:YP_855387.1,GeneID:4487132;Name=YP_855387.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539;gbkey=CDS;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=YP_855387.1;transl_table=11
NC_008570.1	RefSeq	gene	907837	908433	.	-	.	ID=gene846;Dbxref=GeneID:4487133;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AHA_0846
NC_008570.1	RefSeq	CDS	907837	908433	.	-	0	ID=cds815;Parent=gene846;Dbxref=Genbank:YP_855388.1,GeneID:4487133;Name=YP_855388.1;Note=identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;gene=rdgB;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=YP_855388.1;transl_table=11
NC_008570.1	RefSeq	gene	908662	909819	.	+	.	ID=gene847;Dbxref=GeneID:4487134;Name=AHA_0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0847
NC_008570.1	RefSeq	CDS	908662	909819	.	+	0	ID=cds816;Parent=gene847;Dbxref=Genbank:YP_855389.1,GeneID:4487134;Name=YP_855389.1;Note=identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710;gbkey=CDS;product=chloramphenicol resistance protein;protein_id=YP_855389.1;transl_table=11
NC_008570.1	RefSeq	gene	909928	910977	.	+	.	ID=gene848;Dbxref=GeneID:4487232;Name=AHA_0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0848
NC_008570.1	RefSeq	CDS	909928	910977	.	+	0	ID=cds817;Parent=gene848;Dbxref=Genbank:YP_855390.1,GeneID:4487232;Name=YP_855390.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;product=oxidoreductase%2C NAD-binding;protein_id=YP_855390.1;transl_table=11
NC_008570.1	RefSeq	gene	911635	912186	.	-	.	ID=gene849;Dbxref=GeneID:4487233;Name=AHA_0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0849
NC_008570.1	RefSeq	CDS	911635	912186	.	-	0	ID=cds818;Parent=gene849;Dbxref=Genbank:YP_855391.1,GeneID:4487233;Name=YP_855391.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=ribosomal-protein-alanine acetyltransferase;protein_id=YP_855391.1;transl_table=11
NC_008570.1	RefSeq	gene	912186	912740	.	-	.	ID=gene850;Dbxref=GeneID:4487234;Name=AHA_0850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0850
NC_008570.1	RefSeq	CDS	912186	912740	.	-	0	ID=cds819;Parent=gene850;Dbxref=Genbank:YP_855392.1,GeneID:4487234;Name=YP_855392.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=ribosomal-protein-serine acetyltransferase;protein_id=YP_855392.1;transl_table=11
NC_008570.1	RefSeq	gene	913092	914861	.	+	.	ID=gene851;Dbxref=GeneID:4487235;Name=AHA_0851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0851
NC_008570.1	RefSeq	CDS	913092	914861	.	+	0	ID=cds820;Parent=gene851;Dbxref=Genbank:YP_855393.1,GeneID:4487235;Name=YP_855393.1;Note=identified by similarity to GB:AAF07184.1%3B match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF04151%3B match to protein family HMM PF07504;gbkey=CDS;product=elastase;protein_id=YP_855393.1;transl_table=11
NC_008570.1	RefSeq	gene	914913	915806	.	-	.	ID=gene852;Dbxref=GeneID:4487236;Name=AHA_0852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0852
NC_008570.1	RefSeq	CDS	914913	915806	.	-	0	ID=cds821;Parent=gene852;Dbxref=Genbank:YP_855394.1,GeneID:4487236;Name=YP_855394.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855394.1;transl_table=11
NC_008570.1	RefSeq	gene	916021	917214	.	+	.	ID=gene853;Dbxref=GeneID:4487237;Name=AHA_0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0853
NC_008570.1	RefSeq	CDS	916021	917214	.	+	0	ID=cds822;Parent=gene853;Dbxref=Genbank:YP_855395.1,GeneID:4487237;Name=YP_855395.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=YP_855395.1;transl_table=11
NC_008570.1	RefSeq	gene	917279	918352	.	-	.	ID=gene854;Dbxref=GeneID:4487238;Name=AHA_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0854
NC_008570.1	RefSeq	CDS	917279	918352	.	-	0	ID=cds823;Parent=gene854;Dbxref=Genbank:YP_855396.1,GeneID:4487238;Name=YP_855396.1;Note=identified by match to protein family HMM PF00267;gbkey=CDS;product=outer membrane porin protein;protein_id=YP_855396.1;transl_table=11
NC_008570.1	RefSeq	gene	918553	919872	.	-	.	ID=gene855;Dbxref=GeneID:4487239;Name=AHA_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0855
NC_008570.1	RefSeq	CDS	918553	919872	.	-	0	ID=cds824;Parent=gene855;Dbxref=Genbank:YP_855397.1,GeneID:4487239;Name=YP_855397.1;Note=identified by match to protein family HMM PF03605%3B match to protein family HMM TIGR00770;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_855397.1;transl_table=11
NC_008570.1	RefSeq	gene	920000	921442	.	-	.	ID=gene856;Dbxref=GeneID:4487240;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AHA_0856
NC_008570.1	RefSeq	CDS	920000	921442	.	-	0	ID=cds825;Parent=gene856;Dbxref=Genbank:YP_855398.1,GeneID:4487240;Name=YP_855398.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=YP_855398.1;transl_table=11
NC_008570.1	RefSeq	gene	921814	922368	.	+	.	ID=gene857;Dbxref=GeneID:4487241;Name=AHA_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0857
NC_008570.1	RefSeq	CDS	921814	922368	.	+	0	ID=cds826;Parent=gene857;Dbxref=Genbank:YP_855399.1,GeneID:4487241;Name=YP_855399.1;Note=identified by match to protein family HMM PF04186;gbkey=CDS;product=protein FxsA;protein_id=YP_855399.1;transl_table=11
NC_008570.1	RefSeq	gene	922392	923792	.	-	.	ID=gene858;Dbxref=GeneID:4487242;Name=AHA_0858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0858
NC_008570.1	RefSeq	CDS	922392	923792	.	-	0	ID=cds827;Parent=gene858;Dbxref=Genbank:YP_855400.1,GeneID:4487242;Name=YP_855400.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=Na(+) driven multidrug efflux pump;protein_id=YP_855400.1;transl_table=11
NC_008570.1	RefSeq	gene	923975	924268	.	+	.	ID=gene859;Dbxref=GeneID:4487243;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AHA_0859
NC_008570.1	RefSeq	CDS	923975	924268	.	+	0	ID=cds828;Parent=gene859;Dbxref=Genbank:YP_855401.1,GeneID:4487243;Name=YP_855401.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=YP_855401.1;transl_table=11
NC_008570.1	RefSeq	gene	924310	925944	.	+	.	ID=gene860;Dbxref=GeneID:4487244;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=AHA_0860
NC_008570.1	RefSeq	CDS	924310	925944	.	+	0	ID=cds829;Parent=gene860;Dbxref=Genbank:YP_855402.1,GeneID:4487244;Name=YP_855402.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=YP_855402.1;transl_table=11
NC_008570.1	RefSeq	gene	926082	926537	.	+	.	ID=gene861;Dbxref=GeneID:4487245;Name=AHA_0861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0861
NC_008570.1	RefSeq	CDS	926082	926537	.	+	0	ID=cds830;Parent=gene861;Dbxref=Genbank:YP_855403.1,GeneID:4487245;Name=YP_855403.1;Note=identified by match to protein family HMM PF00174;gbkey=CDS;product=oxidoreductase molybdopterin binding subunit;protein_id=YP_855403.1;transl_table=11
NC_008570.1	RefSeq	gene	926561	928492	.	+	.	ID=gene862;Dbxref=GeneID:4487246;Name=AHA_0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0862
NC_008570.1	RefSeq	CDS	926561	928492	.	+	0	ID=cds831;Parent=gene862;Dbxref=Genbank:YP_855404.1,GeneID:4487246;Name=YP_855404.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=PAS/GGDEF domain-containing protein;protein_id=YP_855404.1;transl_table=11
NC_008570.1	RefSeq	gene	928813	929469	.	-	.	ID=gene863;Dbxref=GeneID:4487247;Name=AHA_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0863
NC_008570.1	RefSeq	CDS	928813	929469	.	-	0	ID=cds832;Parent=gene863;Dbxref=Genbank:YP_855405.1,GeneID:4487247;Name=YP_855405.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=YP_855405.1;transl_table=11
NC_008570.1	RefSeq	gene	929579	932446	.	-	.	ID=gene864;Dbxref=GeneID:4487248;Name=AHA_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0864
NC_008570.1	RefSeq	CDS	929579	932446	.	-	0	ID=cds833;Parent=gene864;Dbxref=Genbank:YP_855406.1,GeneID:4487248;Name=YP_855406.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=ATP-dependent helicase HepA;protein_id=YP_855406.1;transl_table=11
NC_008570.1	RefSeq	gene	933020	934569	.	+	.	ID=gene865;Dbxref=GeneID:4487249;Name=rrsF;gbkey=Gene;gene=rrsF;gene_biotype=rRNA;locus_tag=AHA_0865
NC_008570.1	RefSeq	rRNA	933020	934569	.	+	.	ID=rna31;Parent=gene865;Dbxref=GeneID:4487249;gbkey=rRNA;gene=rrsF;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	933020	934569	.	+	.	ID=id32;Parent=rna31;Dbxref=GeneID:4487249;gbkey=rRNA;gene=rrsF;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	934767	934842	.	+	.	ID=gene866;Dbxref=GeneID:4487250;Name=AHA_0866;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_0866
NC_008570.1	RefSeq	tRNA	934767	934842	.	+	.	ID=rna32;Parent=gene866;Dbxref=GeneID:4487250;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	934767	934842	.	+	.	ID=id33;Parent=rna32;Dbxref=GeneID:4487250;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	935081	937969	.	+	.	ID=gene867;Dbxref=GeneID:4488942;Name=rrlF;gbkey=Gene;gene=rrlF;gene_biotype=rRNA;locus_tag=AHA_0867
NC_008570.1	RefSeq	rRNA	935081	937969	.	+	.	ID=rna33;Parent=gene867;Dbxref=GeneID:4488942;gbkey=rRNA;gene=rrlF;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	935081	937969	.	+	.	ID=id34;Parent=rna33;Dbxref=GeneID:4488942;gbkey=rRNA;gene=rrlF;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	938079	938209	.	+	.	ID=gene868;Dbxref=GeneID:4488943;Name=rrfF;gbkey=Gene;gene=rrfF;gene_biotype=rRNA;locus_tag=AHA_0868
NC_008570.1	RefSeq	rRNA	938079	938209	.	+	.	ID=rna34;Parent=gene868;Dbxref=GeneID:4488943;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	938079	938209	.	+	.	ID=id35;Parent=rna34;Dbxref=GeneID:4488943;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	938489	938941	.	+	.	ID=gene869;Dbxref=GeneID:4488944;Name=AHA_0869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0869
NC_008570.1	RefSeq	CDS	938489	938941	.	+	0	ID=cds834;Parent=gene869;Dbxref=Genbank:YP_855407.1,GeneID:4488944;Name=YP_855407.1;gbkey=CDS;product=pullulanase;protein_id=YP_855407.1;transl_table=11
NC_008570.1	RefSeq	gene	939149	941296	.	+	.	ID=gene870;Dbxref=GeneID:4488945;Name=AHA_0870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0870
NC_008570.1	RefSeq	CDS	939149	941296	.	+	0	ID=cds835;Parent=gene870;Dbxref=Genbank:YP_855408.1,GeneID:4488945;Name=YP_855408.1;Note=identified by match to protein family HMM PF02867%3B match to protein family HMM TIGR02504;gbkey=CDS;product=ribonucleoside-diphosphate reductase;protein_id=YP_855408.1;transl_table=11
NC_008570.1	RefSeq	gene	941307	941987	.	+	.	ID=gene871;Dbxref=GeneID:4488946;Name=AHA_0871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0871
NC_008570.1	RefSeq	CDS	941307	941987	.	+	0	ID=cds836;Parent=gene871;Dbxref=Genbank:YP_855409.1,GeneID:4488946;Name=YP_855409.1;gbkey=CDS;product=ribonucleotide reductase system;protein_id=YP_855409.1;transl_table=11
NC_008570.1	RefSeq	gene	942196	943566	.	+	.	ID=gene872;Dbxref=GeneID:4488947;Name=AHA_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0872
NC_008570.1	RefSeq	CDS	942196	943566	.	+	0	ID=cds837;Parent=gene872;Dbxref=Genbank:YP_855410.1,GeneID:4488947;Name=YP_855410.1;Note=identified by match to protein family HMM PF02562;gbkey=CDS;product=PhoH family protein;protein_id=YP_855410.1;transl_table=11
NC_008570.1	RefSeq	gene	943634	943744	.	-	.	ID=gene873;Dbxref=GeneID:4488948;Name=AHA_0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0873
NC_008570.1	RefSeq	CDS	943634	943744	.	-	0	ID=cds838;Parent=gene873;Dbxref=Genbank:YP_855411.1,GeneID:4488948;Name=YP_855411.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855411.1;transl_table=11
NC_008570.1	RefSeq	gene	943804	944511	.	-	.	ID=gene874;Dbxref=GeneID:4488949;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AHA_0874
NC_008570.1	RefSeq	CDS	943804	944511	.	-	0	ID=cds839;Parent=gene874;Dbxref=Genbank:YP_855412.1,GeneID:4488949;Name=YP_855412.1;Note=identified by similarity to SP:P31548%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR01277;gbkey=CDS;gene=thiQ;product=thiamine ABC transporter ATP-binding protein;protein_id=YP_855412.1;transl_table=11
NC_008570.1	RefSeq	gene	944577	946199	.	-	.	ID=gene875;Dbxref=GeneID:4488950;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AHA_0875
NC_008570.1	RefSeq	CDS	944577	946199	.	-	0	ID=cds840;Parent=gene875;Dbxref=Genbank:YP_855414.1,GeneID:4488950;Name=YP_855414.1;Note=identified by similarity to SP:P31549%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01253;gbkey=CDS;gene=thiP;product=thiamine/thiamine pyrophosphate ABC transporter permease;protein_id=YP_855414.1;transl_table=11
NC_008570.1	RefSeq	gene	946196	947176	.	-	.	ID=gene876;Dbxref=GeneID:4488951;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AHA_0876
NC_008570.1	RefSeq	CDS	946196	947176	.	-	0	ID=cds841;Parent=gene876;Dbxref=Genbank:YP_855416.1,GeneID:4488951;Name=YP_855416.1;Note=identified by similarity to SP:P31550%3B match to protein family HMM PF01547%3B match to protein family HMM TIGR01254%3B match to protein family HMM TIGR01276;gbkey=CDS;gene=thiB;product=thiamin/thiamin pyrophosphate ABC transporter periplasmic thiamin/thiamin pyrophospate-binding protein;protein_id=YP_855416.1;transl_table=11
NC_008570.1	RefSeq	gene	947341	947700	.	+	.	ID=gene877;Dbxref=GeneID:4488952;Name=AHA_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0877
NC_008570.1	RefSeq	CDS	947341	947700	.	+	0	ID=cds842;Parent=gene877;Dbxref=Genbank:YP_855417.1,GeneID:4488952;Name=YP_855417.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=YP_855417.1;transl_table=11
NC_008570.1	RefSeq	gene	947803	948729	.	-	.	ID=gene878;Dbxref=GeneID:4488953;Name=AHA_0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0878
NC_008570.1	RefSeq	CDS	947803	948729	.	-	0	ID=cds843;Parent=gene878;Dbxref=Genbank:YP_855418.1,GeneID:4488953;Name=YP_855418.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855418.1;transl_table=11
NC_008570.1	RefSeq	gene	948846	949445	.	-	.	ID=gene879;Dbxref=GeneID:4488954;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AHA_0879
NC_008570.1	RefSeq	CDS	948846	949445	.	-	0	ID=cds844;Parent=gene879;Dbxref=Genbank:YP_855420.1,GeneID:4488954;Name=YP_855420.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=isopropylmalate isomerase small subunit;protein_id=YP_855420.1;transl_table=11
NC_008570.1	RefSeq	gene	949458	950855	.	-	.	ID=gene880;Dbxref=GeneID:4488955;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AHA_0880
NC_008570.1	RefSeq	CDS	949458	950855	.	-	0	ID=cds845;Parent=gene880;Dbxref=Genbank:YP_855421.1,GeneID:4488955;Name=YP_855421.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;gene=leuC;product=isopropylmalate isomerase large subunit;protein_id=YP_855421.1;transl_table=11
NC_008570.1	RefSeq	gene	950888	951973	.	-	.	ID=gene881;Dbxref=GeneID:4488956;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AHA_0881
NC_008570.1	RefSeq	CDS	950888	951973	.	-	0	ID=cds846;Parent=gene881;Dbxref=Genbank:YP_855422.1,GeneID:4488956;Name=YP_855422.1;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=YP_855422.1;transl_table=11
NC_008570.1	RefSeq	gene	951976	953550	.	-	.	ID=gene882;Dbxref=GeneID:4488957;Name=leuA-1;gbkey=Gene;gene=leuA-1;gene_biotype=protein_coding;locus_tag=AHA_0882
NC_008570.1	RefSeq	CDS	951976	953550	.	-	0	ID=cds847;Parent=gene882;Dbxref=Genbank:YP_855423.1,GeneID:4488957;Name=YP_855423.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;gene=leuA-1;product=2-isopropylmalate synthase;protein_id=YP_855423.1;transl_table=11
NC_008570.1	RefSeq	gene	953958	954581	.	+	.	ID=gene883;Dbxref=GeneID:4488958;Name=AHA_0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0883
NC_008570.1	RefSeq	CDS	953958	954581	.	+	0	ID=cds848;Parent=gene883;Dbxref=Genbank:YP_855424.1,GeneID:4488958;Name=YP_855424.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_855424.1;transl_table=11
NC_008570.1	RefSeq	gene	954707	955207	.	+	.	ID=gene884;Dbxref=GeneID:4488959;Name=AHA_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0884
NC_008570.1	RefSeq	CDS	954707	955207	.	+	0	ID=cds849;Parent=gene884;Dbxref=Genbank:YP_855425.1,GeneID:4488959;Name=YP_855425.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;product=PAP2 family protein;protein_id=YP_855425.1;transl_table=11
NC_008570.1	RefSeq	gene	955207	956316	.	+	.	ID=gene885;Dbxref=GeneID:4488960;Name=AHA_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0885
NC_008570.1	RefSeq	CDS	955207	956316	.	+	0	ID=cds850;Parent=gene885;Dbxref=Genbank:YP_855426.1,GeneID:4488960;Name=YP_855426.1;Note=identified by match to protein family HMM TIGR00661;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_855426.1;transl_table=11
NC_008570.1	RefSeq	gene	956353	956505	.	+	.	ID=gene886;Dbxref=GeneID:4488961;Name=AHA_0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0886
NC_008570.1	RefSeq	CDS	956353	956505	.	+	0	ID=cds851;Parent=gene886;Dbxref=Genbank:YP_855427.1,GeneID:4488961;Name=YP_855427.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855427.1;transl_table=11
NC_008570.1	RefSeq	gene	956895	958613	.	+	.	ID=gene887;Dbxref=GeneID:4490859;Name=ilvB-1;gbkey=Gene;gene=ilvB-1;gene_biotype=protein_coding;locus_tag=AHA_0887
NC_008570.1	RefSeq	CDS	956895	958613	.	+	0	ID=cds852;Parent=gene887;Dbxref=Genbank:YP_855428.1,GeneID:4490859;Name=YP_855428.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118;gbkey=CDS;gene=ilvB-1;product=acetolactate synthase large subunit;protein_id=YP_855428.1;transl_table=11
NC_008570.1	RefSeq	gene	958586	958708	.	+	.	ID=gene888;Dbxref=GeneID:4490860;Name=AHA_0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0888
NC_008570.1	RefSeq	CDS	958586	958708	.	+	0	ID=cds853;Parent=gene888;Dbxref=Genbank:YP_855429.1,GeneID:4490860;Name=YP_855429.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855429.1;transl_table=11
NC_008570.1	RefSeq	gene	958705	959199	.	+	.	ID=gene889;Dbxref=GeneID:4490861;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=AHA_0889
NC_008570.1	RefSeq	CDS	958705	959199	.	+	0	ID=cds854;Parent=gene889;Dbxref=Genbank:YP_855430.1,GeneID:4490861;Name=YP_855430.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase 3 regulatory subunit;protein_id=YP_855430.1;transl_table=11
NC_008570.1	RefSeq	gene	959593	961746	.	-	.	ID=gene890;Dbxref=GeneID:4490862;Name=AHA_0890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0890
NC_008570.1	RefSeq	CDS	959593	961746	.	-	0	ID=cds855;Parent=gene890;Dbxref=Genbank:YP_855431.1,GeneID:4490862;Name=YP_855431.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=YP_855431.1;transl_table=11
NC_008570.1	RefSeq	gene	961816	963018	.	-	.	ID=gene891;Dbxref=GeneID:4490863;Name=ackA-1;gbkey=Gene;gene=ackA-1;gene_biotype=protein_coding;locus_tag=AHA_0891
NC_008570.1	RefSeq	CDS	961816	963018	.	-	0	ID=cds856;Parent=gene891;Dbxref=Genbank:YP_855433.1,GeneID:4490863;Name=YP_855433.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA-1;product=acetate kinase;protein_id=YP_855433.1;transl_table=11
NC_008570.1	RefSeq	gene	963321	963761	.	+	.	ID=gene892;Dbxref=GeneID:4490864;Name=AHA_0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0892
NC_008570.1	RefSeq	CDS	963321	963761	.	+	0	ID=cds857;Parent=gene892;Dbxref=Genbank:YP_855435.1,GeneID:4490864;Name=YP_855435.1;Note=identified by match to protein family HMM PF04217;gbkey=CDS;product=hypothetical protein;protein_id=YP_855435.1;transl_table=11
NC_008570.1	RefSeq	gene	963817	964317	.	-	.	ID=gene893;Dbxref=GeneID:4490865;Name=AHA_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0893
NC_008570.1	RefSeq	CDS	963817	964317	.	-	0	ID=cds858;Parent=gene893;Dbxref=Genbank:YP_855436.1,GeneID:4490865;Name=YP_855436.1;Note=identified by match to protein family HMM PF03887;gbkey=CDS;product=hypothetical protein;protein_id=YP_855436.1;transl_table=11
NC_008570.1	RefSeq	gene	964732	965196	.	-	.	ID=gene894;Dbxref=GeneID:4490866;Name=AHA_0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0894
NC_008570.1	RefSeq	CDS	964732	965196	.	-	0	ID=cds859;Parent=gene894;Dbxref=Genbank:YP_855437.1,GeneID:4490866;Name=YP_855437.1;Note=identified by match to protein family HMM PF00578;gbkey=CDS;product=peroxiredoxin bcp;protein_id=YP_855437.1;transl_table=11
NC_008570.1	RefSeq	gene	965218	966036	.	-	.	ID=gene895;Dbxref=GeneID:4490867;Name=AHA_0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0895
NC_008570.1	RefSeq	CDS	965218	966036	.	-	0	ID=cds860;Parent=gene895;Dbxref=Genbank:YP_855438.1,GeneID:4490867;Name=YP_855438.1;gbkey=CDS;product=glycine cleavage system transcriptional repressor;protein_id=YP_855438.1;transl_table=11
NC_008570.1	RefSeq	gene	966035	966922	.	+	.	ID=gene896;Dbxref=GeneID:4490868;Name=dapA-1;gbkey=Gene;gene=dapA-1;gene_biotype=protein_coding;locus_tag=AHA_0896
NC_008570.1	RefSeq	CDS	966035	966922	.	+	0	ID=cds861;Parent=gene896;Dbxref=Genbank:YP_855439.1,GeneID:4490868;Name=YP_855439.1;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapA-1;product=dihydrodipicolinate synthase;protein_id=YP_855439.1;transl_table=11
NC_008570.1	RefSeq	gene	966915	968039	.	+	.	ID=gene897;Dbxref=GeneID:4490869;Name=AHA_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0897
NC_008570.1	RefSeq	CDS	966915	968039	.	+	0	ID=cds862;Parent=gene897;Dbxref=Genbank:YP_855440.1,GeneID:4490869;Name=YP_855440.1;Note=identified by match to protein family HMM PF06804;gbkey=CDS;product=NlpB/DapX lipoprotein;protein_id=YP_855440.1;transl_table=11
NC_008570.1	RefSeq	gene	968093	969208	.	+	.	ID=gene898;Dbxref=GeneID:4490870;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AHA_0898
NC_008570.1	RefSeq	CDS	968093	969208	.	+	0	ID=cds863;Parent=gene898;Dbxref=Genbank:YP_855441.1,GeneID:4490870;Name=YP_855441.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=YP_855441.1;transl_table=11
NC_008570.1	RefSeq	gene	969340	969942	.	-	.	ID=gene899;Dbxref=GeneID:4490871;Name=AHA_0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0899
NC_008570.1	RefSeq	CDS	969340	969942	.	-	0	ID=cds864;Parent=gene899;Dbxref=Genbank:YP_855442.1,GeneID:4490871;Name=YP_855442.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_855442.1;transl_table=11
NC_008570.1	RefSeq	gene	970041	970940	.	+	.	ID=gene900;Dbxref=GeneID:4490872;Name=AHA_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0900
NC_008570.1	RefSeq	CDS	970041	970940	.	+	0	ID=cds865;Parent=gene900;Dbxref=Genbank:YP_855443.1,GeneID:4490872;Name=YP_855443.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855443.1;transl_table=11
NC_008570.1	RefSeq	gene	971067	971654	.	+	.	ID=gene901;Dbxref=GeneID:4490873;Name=AHA_0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0901
NC_008570.1	RefSeq	CDS	971067	971654	.	+	0	ID=cds866;Parent=gene901;Dbxref=Genbank:YP_855444.1,GeneID:4490873;Name=YP_855444.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855444.1;transl_table=11
NC_008570.1	RefSeq	gene	971727	972164	.	+	.	ID=gene902;Dbxref=GeneID:4490874;Name=AHA_0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0902
NC_008570.1	RefSeq	CDS	971727	972164	.	+	0	ID=cds867;Parent=gene902;Dbxref=Genbank:YP_855445.1,GeneID:4490874;Name=YP_855445.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;product=HIT family hydrolase;protein_id=YP_855445.1;transl_table=11
NC_008570.1	RefSeq	gene	972263	972961	.	+	.	ID=gene903;Dbxref=GeneID:4490875;Name=AHA_0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0903
NC_008570.1	RefSeq	CDS	972263	972961	.	+	0	ID=cds868;Parent=gene903;Dbxref=Genbank:YP_855446.1,GeneID:4490875;Name=YP_855446.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855446.1;transl_table=11
NC_008570.1	RefSeq	gene	973032	974030	.	-	.	ID=gene904;Dbxref=GeneID:4490876;Name=AHA_0904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0904
NC_008570.1	RefSeq	CDS	973032	974030	.	-	0	ID=cds869;Parent=gene904;Dbxref=Genbank:YP_855447.1,GeneID:4490876;Name=YP_855447.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855447.1;transl_table=11
NC_008570.1	RefSeq	gene	974238	976550	.	+	.	ID=gene905;Dbxref=GeneID:4490877;Name=AHA_0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0905
NC_008570.1	RefSeq	CDS	974238	976550	.	+	0	ID=cds870;Parent=gene905;Dbxref=Genbank:YP_855448.1,GeneID:4490877;Name=YP_855448.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=aerobic respiration control sensor protein ArcB;protein_id=YP_855448.1;transl_table=11
NC_008570.1	RefSeq	gene	976579	977934	.	+	.	ID=gene906;Dbxref=GeneID:4490248;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AHA_0906
NC_008570.1	RefSeq	CDS	976579	977934	.	+	0	ID=cds871;Parent=gene906;Dbxref=Genbank:YP_855449.1,GeneID:4490248;Name=YP_855449.1;Note=forms a homotetramer%3B requires magnesium for activity%3B catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate;gbkey=CDS;gene=dgt;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=YP_855449.1;transl_table=11
NC_008570.1	RefSeq	gene	978257	978460	.	+	.	ID=gene907;Dbxref=GeneID:4490249;Name=AHA_0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0907
NC_008570.1	RefSeq	CDS	978257	978460	.	+	0	ID=cds872;Parent=gene907;Dbxref=Genbank:YP_855450.1,GeneID:4490249;Name=YP_855450.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855450.1;transl_table=11
NC_008570.1	RefSeq	gene	978610	982887	.	+	.	ID=gene908;Dbxref=GeneID:4490250;Name=AHA_0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0908
NC_008570.1	RefSeq	CDS	978610	982887	.	+	0	ID=cds873;Parent=gene908;Dbxref=Genbank:YP_855451.1,GeneID:4490250;Name=YP_855451.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=virulence sensor protein BvgS;protein_id=YP_855451.1;transl_table=11
NC_008570.1	RefSeq	gene	982892	984079	.	+	.	ID=gene909;Dbxref=GeneID:4490251;Name=AHA_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0909
NC_008570.1	RefSeq	CDS	982892	984079	.	+	0	ID=cds874;Parent=gene909;Dbxref=Genbank:YP_855452.1,GeneID:4490251;Name=YP_855452.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00563;gbkey=CDS;product=response regulator;protein_id=YP_855452.1;transl_table=11
NC_008570.1	RefSeq	gene	984118	986094	.	+	.	ID=gene910;Dbxref=GeneID:4490252;Name=AHA_0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0910
NC_008570.1	RefSeq	CDS	984118	986094	.	+	0	ID=cds875;Parent=gene910;Dbxref=Genbank:YP_855453.1,GeneID:4490252;Name=YP_855453.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=chemotaxis transducer;protein_id=YP_855453.1;transl_table=11
NC_008570.1	RefSeq	gene	986214	986318	.	-	.	ID=gene911;Dbxref=GeneID:4490253;Name=AHA_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0911
NC_008570.1	RefSeq	CDS	986214	986318	.	-	0	ID=cds876;Parent=gene911;Dbxref=Genbank:YP_855454.1,GeneID:4490253;Name=YP_855454.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855454.1;transl_table=11
NC_008570.1	RefSeq	gene	986320	986871	.	-	.	ID=gene912;Dbxref=GeneID:4490254;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AHA_0912
NC_008570.1	RefSeq	CDS	986320	986871	.	-	0	ID=cds877;Parent=gene912;Dbxref=Genbank:YP_855455.1,GeneID:4490254;Name=YP_855455.1;Note=identified by match to protein family HMM PF02357%3B match to protein family HMM TIGR01955;gbkey=CDS;gene=rfaH;product=transcriptional activator RfaH;protein_id=YP_855455.1;transl_table=11
NC_008570.1	RefSeq	gene	986917	987717	.	-	.	ID=gene913;Dbxref=GeneID:4490255;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AHA_0913
NC_008570.1	RefSeq	CDS	986917	987717	.	-	0	ID=cds878;Parent=gene913;Dbxref=Genbank:YP_855456.1,GeneID:4490255;Name=YP_855456.1;Note=identified by similarity to SP:P28635%3B match to protein family HMM PF03180%3B match to protein family HMM TIGR00363;gbkey=CDS;gene=metQ;product=D-methionine ABC transporter periplasmic D-methionine-binding lipoprotein;protein_id=YP_855456.1;transl_table=11
NC_008570.1	RefSeq	gene	987743	988396	.	-	.	ID=gene914;Dbxref=GeneID:4490256;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AHA_0914
NC_008570.1	RefSeq	CDS	987743	988396	.	-	0	ID=cds879;Parent=gene914;Dbxref=Genbank:YP_855457.1,GeneID:4490256;Name=YP_855457.1;Note=identified by similarity to SP:P31547%3B match to protein family HMM PF00528;gbkey=CDS;gene=metI;product=D-methionine ABC transporter permease;protein_id=YP_855457.1;transl_table=11
NC_008570.1	RefSeq	gene	988377	989420	.	-	.	ID=gene915;Dbxref=GeneID:4490257;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AHA_0915
NC_008570.1	RefSeq	CDS	988377	989420	.	-	0	ID=cds880;Parent=gene915;Dbxref=Genbank:YP_855458.1,GeneID:4490257;Name=YP_855458.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=DL-methionine transporter ATP-binding subunit;protein_id=YP_855458.1;transl_table=11
NC_008570.1	RefSeq	gene	989577	990347	.	+	.	ID=gene916;Dbxref=GeneID:4490258;Name=AHA_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0916
NC_008570.1	RefSeq	CDS	989577	990347	.	+	0	ID=cds881;Parent=gene916;Dbxref=Genbank:YP_855459.1,GeneID:4490258;Name=YP_855459.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855459.1;transl_table=11
NC_008570.1	RefSeq	gene	990456	991214	.	-	.	ID=gene917;Dbxref=GeneID:4490259;Name=AHA_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0917
NC_008570.1	RefSeq	CDS	990456	991214	.	-	0	ID=cds882;Parent=gene917;Dbxref=Genbank:YP_855460.1,GeneID:4490259;Name=YP_855460.1;Note=identified by match to protein family HMM PF00480;gbkey=CDS;product=polyphosphate glucokinase;protein_id=YP_855460.1;transl_table=11
NC_008570.1	RefSeq	gene	991298	992539	.	-	.	ID=gene918;Dbxref=GeneID:4488404;Name=AHA_0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0918
NC_008570.1	RefSeq	CDS	991298	992539	.	-	0	ID=cds883;Parent=gene918;Dbxref=Genbank:YP_855461.1,GeneID:4488404;Name=YP_855461.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR00276;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_855461.1;transl_table=11
NC_008570.1	RefSeq	gene	992600	994111	.	+	.	ID=gene919;Dbxref=GeneID:4488405;Name=AHA_0919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0919
NC_008570.1	RefSeq	CDS	992600	994111	.	+	0	ID=cds884;Parent=gene919;Dbxref=Genbank:YP_855462.1,GeneID:4488405;Name=YP_855462.1;Note=identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197;gbkey=CDS;product=hypothetical protein;protein_id=YP_855462.1;transl_table=11
NC_008570.1	RefSeq	gene	994120	994593	.	+	.	ID=gene920;Dbxref=GeneID:4488406;Name=AHA_0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0920
NC_008570.1	RefSeq	CDS	994120	994593	.	+	0	ID=cds885;Parent=gene920;Dbxref=Genbank:YP_855463.1,GeneID:4488406;Name=YP_855463.1;Note=identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;product=hypothetical protein;protein_id=YP_855463.1;transl_table=11
NC_008570.1	RefSeq	gene	994584	996149	.	+	.	ID=gene921;Dbxref=GeneID:4488407;Name=AHA_0921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0921
NC_008570.1	RefSeq	CDS	994584	996149	.	+	0	ID=cds886;Parent=gene921;Dbxref=Genbank:YP_855464.1,GeneID:4488407;Name=YP_855464.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01520;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_855464.1;transl_table=11
NC_008570.1	RefSeq	gene	996379	998247	.	+	.	ID=gene922;Dbxref=GeneID:4488408;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AHA_0922
NC_008570.1	RefSeq	CDS	996379	998247	.	+	0	ID=cds887;Parent=gene922;Dbxref=Genbank:YP_855465.1,GeneID:4488408;Name=YP_855465.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=YP_855465.1;transl_table=11
NC_008570.1	RefSeq	gene	998340	999257	.	+	.	ID=gene923;Dbxref=GeneID:4488409;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AHA_0923
NC_008570.1	RefSeq	CDS	998340	999257	.	+	0	ID=cds888;Parent=gene923;Dbxref=Genbank:YP_855466.1,GeneID:4488409;Name=YP_855466.1;Note=identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=YP_855466.1;transl_table=11
NC_008570.1	RefSeq	gene	999328	999591	.	+	.	ID=gene924;Dbxref=GeneID:4488410;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AHA_0924
NC_008570.1	RefSeq	CDS	999328	999591	.	+	0	ID=cds889;Parent=gene924;Dbxref=Genbank:YP_855467.1,GeneID:4488410;Name=YP_855467.1;Note=Stimulates the elongation of poly(A) tails;gbkey=CDS;gene=hfq;product=RNA-binding protein Hfq;protein_id=YP_855467.1;transl_table=11
NC_008570.1	RefSeq	gene	999655	1000941	.	+	.	ID=gene925;Dbxref=GeneID:4488411;Name=AHA_0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0925
NC_008570.1	RefSeq	CDS	999655	1000941	.	+	0	ID=cds890;Parent=gene925;Dbxref=Genbank:YP_855468.1,GeneID:4488411;Name=YP_855468.1;Note=identified by match to protein family HMM PF01926;gbkey=CDS;product=GTP-binding protein HflX;protein_id=YP_855468.1;transl_table=11
NC_008570.1	RefSeq	gene	1001033	1002184	.	+	.	ID=gene926;Dbxref=GeneID:4488412;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AHA_0926
NC_008570.1	RefSeq	CDS	1001033	1002184	.	+	0	ID=cds891;Parent=gene926;Dbxref=Genbank:YP_855469.1,GeneID:4488412;Name=YP_855469.1;Note=identified by similarity to SP:P25662%3B match to protein family HMM PF01145%3B match to protein family HMM TIGR01933;gbkey=CDS;gene=hflK;product=HflK protein;protein_id=YP_855469.1;transl_table=11
NC_008570.1	RefSeq	gene	1002188	1003072	.	+	.	ID=gene927;Dbxref=GeneID:4488413;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AHA_0927
NC_008570.1	RefSeq	CDS	1002188	1003072	.	+	0	ID=cds892;Parent=gene927;Dbxref=Genbank:YP_855470.1,GeneID:4488413;Name=YP_855470.1;Note=identified by match to protein family HMM PF01145%3B match to protein family HMM TIGR01932;gbkey=CDS;gene=hflC;product=HflC protein;protein_id=YP_855470.1;transl_table=11
NC_008570.1	RefSeq	gene	1003184	1003372	.	+	.	ID=gene928;Dbxref=GeneID:4488414;Name=AHA_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0928
NC_008570.1	RefSeq	CDS	1003184	1003372	.	+	0	ID=cds893;Parent=gene928;Dbxref=Genbank:YP_855471.1,GeneID:4488414;Name=YP_855471.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855471.1;transl_table=11
NC_008570.1	RefSeq	gene	1003460	1004431	.	-	.	ID=gene929;Dbxref=GeneID:4488415;Name=AHA_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0929
NC_008570.1	RefSeq	CDS	1003460	1004431	.	-	0	ID=cds894;Parent=gene929;Dbxref=Genbank:YP_855472.1,GeneID:4488415;Name=YP_855472.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;product=octaprenyl-diphosphate synthase;protein_id=YP_855472.1;transl_table=11
NC_008570.1	RefSeq	gene	1004674	1004985	.	+	.	ID=gene930;Dbxref=GeneID:4488416;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AHA_0930
NC_008570.1	RefSeq	CDS	1004674	1004985	.	+	0	ID=cds895;Parent=gene930;Dbxref=Genbank:YP_855473.1,GeneID:4488416;Name=YP_855473.1;Note=identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=YP_855473.1;transl_table=11
NC_008570.1	RefSeq	gene	1005003	1005260	.	+	.	ID=gene931;Dbxref=GeneID:4488417;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AHA_0931
NC_008570.1	RefSeq	CDS	1005003	1005260	.	+	0	ID=cds896;Parent=gene931;Dbxref=Genbank:YP_855474.1,GeneID:4488417;Name=YP_855474.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=YP_855474.1;transl_table=11
NC_008570.1	RefSeq	gene	1005451	1006653	.	+	.	ID=gene932;Dbxref=GeneID:4488418;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=AHA_0932
NC_008570.1	RefSeq	CDS	1005451	1006653	.	+	0	ID=cds897;Parent=gene932;Dbxref=Genbank:YP_855475.1,GeneID:4488418;Name=YP_855475.1;Note=essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=YP_855475.1;transl_table=11
NC_008570.1	RefSeq	gene	1007048	1008418	.	+	.	ID=gene933;Dbxref=GeneID:4488419;Name=AHA_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0933
NC_008570.1	RefSeq	CDS	1007048	1008418	.	+	0	ID=cds898;Parent=gene933;Dbxref=Genbank:YP_855476.1,GeneID:4488419;Name=YP_855476.1;Note=identified by match to protein family HMM PF07670;gbkey=CDS;product=membrane protein;protein_id=YP_855476.1;transl_table=11
NC_008570.1	RefSeq	gene	1008590	1010284	.	+	.	ID=gene934;Dbxref=GeneID:4488420;Name=AHA_0934;Note=AMP-binding family protein%2C authentic point mutation%3B this gene contains a premature stop which is not the result of sequencing error%3B identified by match to protein family HMM PF00501;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AHA_0934;pseudo=true
NC_008570.1	RefSeq	gene	1010327	1010680	.	-	.	ID=gene935;Dbxref=GeneID:4488421;Name=AHA_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0935
NC_008570.1	RefSeq	CDS	1010327	1010680	.	-	0	ID=cds899;Parent=gene935;Dbxref=Genbank:YP_855477.1,GeneID:4488421;Name=YP_855477.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855477.1;transl_table=11
NC_008570.1	RefSeq	gene	1010757	1011107	.	-	.	ID=gene936;Dbxref=GeneID:4488422;Name=AHA_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0936
NC_008570.1	RefSeq	CDS	1010757	1011107	.	-	0	ID=cds900;Parent=gene936;Dbxref=Genbank:YP_855478.1,GeneID:4488422;Name=YP_855478.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855478.1;transl_table=11
NC_008570.1	RefSeq	gene	1011240	1014212	.	-	.	ID=gene937;Dbxref=GeneID:4486900;Name=AHA_0937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0937
NC_008570.1	RefSeq	CDS	1011240	1014212	.	-	0	ID=cds901;Parent=gene937;Dbxref=Genbank:YP_855479.1,GeneID:4486900;Name=YP_855479.1;Note=identified by match to protein family HMM PF00672;gbkey=CDS;product=chemotaxis sensory transducer family protein;protein_id=YP_855479.1;transl_table=11
NC_008570.1	RefSeq	gene	1014368	1015357	.	+	.	ID=gene938;Dbxref=GeneID:4486901;Name=AHA_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0938
NC_008570.1	RefSeq	CDS	1014368	1015357	.	+	0	ID=cds902;Parent=gene938;Dbxref=Genbank:YP_855480.1,GeneID:4486901;Name=YP_855480.1;Note=identified by match to protein family HMM PF00296;gbkey=CDS;product=flavin dependent oxidoreductase;protein_id=YP_855480.1;transl_table=11
NC_008570.1	RefSeq	gene	1015593	1016093	.	+	.	ID=gene939;Dbxref=GeneID:4486902;Name=AHA_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0939
NC_008570.1	RefSeq	CDS	1015593	1016093	.	+	0	ID=cds903;Parent=gene939;Dbxref=Genbank:YP_855481.1,GeneID:4486902;Name=YP_855481.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=helix-turn-helix domain-containing protein;protein_id=YP_855481.1;transl_table=11
NC_008570.1	RefSeq	gene	1016259	1017080	.	-	.	ID=gene940;Dbxref=GeneID:4486903;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AHA_0940
NC_008570.1	RefSeq	CDS	1016259	1017080	.	-	0	ID=cds904;Parent=gene940;Dbxref=Genbank:YP_855482.1,GeneID:4486903;Name=YP_855482.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=diadenosine tetraphosphatase;protein_id=YP_855482.1;transl_table=11
NC_008570.1	RefSeq	gene	1017087	1017449	.	-	.	ID=gene941;Dbxref=GeneID:4486904;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AHA_0941
NC_008570.1	RefSeq	CDS	1017087	1017449	.	-	0	ID=cds905;Parent=gene941;Dbxref=Genbank:YP_855483.1,GeneID:4486904;Name=YP_855483.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=ApaG protein;protein_id=YP_855483.1;transl_table=11
NC_008570.1	RefSeq	gene	1017454	1018269	.	-	.	ID=gene942;Dbxref=GeneID:4486905;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=AHA_0942
NC_008570.1	RefSeq	CDS	1017454	1018269	.	-	0	ID=cds906;Parent=gene942;Dbxref=Genbank:YP_855484.1,GeneID:4486905;Name=YP_855484.1;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=YP_855484.1;transl_table=11
NC_008570.1	RefSeq	gene	1018271	1019266	.	-	.	ID=gene943;Dbxref=GeneID:4486906;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AHA_0943
NC_008570.1	RefSeq	CDS	1018271	1019266	.	-	0	ID=cds907;Parent=gene943;Dbxref=Genbank:YP_855485.1,GeneID:4486906;Name=YP_855485.1;Note=identified by match to protein family HMM PF04166%3B match to protein family HMM TIGR00557;gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=YP_855485.1;transl_table=11
NC_008570.1	RefSeq	gene	1019266	1020564	.	-	.	ID=gene944;Dbxref=GeneID:4486907;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AHA_0944
NC_008570.1	RefSeq	CDS	1019266	1020564	.	-	0	ID=cds908;Parent=gene944;Dbxref=Genbank:YP_855486.1,GeneID:4486907;Name=YP_855486.1;Note=identified by similarity to SP:P21202%3B match to protein family HMM PF00639;gbkey=CDS;gene=surA;product=peptidylprolyl cis-trans isomerase SurA;protein_id=YP_855486.1;transl_table=11
NC_008570.1	RefSeq	gene	1020595	1023027	.	-	.	ID=gene945;Dbxref=GeneID:4486908;Name=AHA_0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0945
NC_008570.1	RefSeq	CDS	1020595	1023027	.	-	0	ID=cds909;Parent=gene945;Dbxref=Genbank:YP_855487.1,GeneID:4486908;Name=YP_855487.1;Note=identified by match to protein family HMM PF03968%3B match to protein family HMM PF04453;gbkey=CDS;product=organic solvent tolerance protein;protein_id=YP_855487.1;transl_table=11
NC_008570.1	RefSeq	gene	1023202	1024212	.	+	.	ID=gene946;Dbxref=GeneID:4486909;Name=AHA_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0946
NC_008570.1	RefSeq	CDS	1023202	1024212	.	+	0	ID=cds910;Parent=gene946;Dbxref=Genbank:YP_855488.1,GeneID:4486909;Name=YP_855488.1;Note=identified by match to protein family HMM PF01636;gbkey=CDS;product=aminoglycoside phosphotransferase;protein_id=YP_855488.1;transl_table=11
NC_008570.1	RefSeq	gene	1024209	1024877	.	+	.	ID=gene947;Dbxref=GeneID:4486910;Name=AHA_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0947
NC_008570.1	RefSeq	CDS	1024209	1024877	.	+	0	ID=cds911;Parent=gene947;Dbxref=Genbank:YP_855489.1,GeneID:4486910;Name=YP_855489.1;Note=identified by match to protein family HMM PF00483;gbkey=CDS;product=nucleotidyltransferase family protein;protein_id=YP_855489.1;transl_table=11
NC_008570.1	RefSeq	gene	1024897	1025727	.	+	.	ID=gene948;Dbxref=GeneID:4486911;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AHA_0948
NC_008570.1	RefSeq	CDS	1024897	1025727	.	+	0	ID=cds912;Parent=gene948;Dbxref=Genbank:YP_855490.1,GeneID:4486911;Name=YP_855490.1;Note=identified by similarity to SP:P31680%3B match to protein family HMM PF00226;gbkey=CDS;gene=djlA;product=co-chaperone DjlA;protein_id=YP_855490.1;transl_table=11
NC_008570.1	RefSeq	gene	1025804	1027147	.	-	.	ID=gene949;Dbxref=GeneID:4486912;Name=AHA_0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0949
NC_008570.1	RefSeq	CDS	1025804	1027147	.	-	0	ID=cds913;Parent=gene949;Dbxref=Genbank:YP_855491.1,GeneID:4486912;Name=YP_855491.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916;gbkey=CDS;product=xanthine/uracil permease family protein;protein_id=YP_855491.1;transl_table=11
NC_008570.1	RefSeq	gene	1027911	1029578	.	-	.	ID=gene950;Dbxref=GeneID:4486913;Name=AHA_0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0950
NC_008570.1	RefSeq	CDS	1027911	1029578	.	-	0	ID=cds914;Parent=gene950;Dbxref=Genbank:YP_855492.1,GeneID:4486913;Name=YP_855492.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_855492.1;transl_table=11
NC_008570.1	RefSeq	gene	1029819	1030394	.	+	.	ID=gene951;Dbxref=GeneID:4486914;Name=AHA_0951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0951
NC_008570.1	RefSeq	CDS	1029819	1030394	.	+	0	ID=cds915;Parent=gene951;Dbxref=Genbank:YP_855493.1,GeneID:4486914;Name=YP_855493.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=Crp family transcriptional regulator;protein_id=YP_855493.1;transl_table=11
NC_008570.1	RefSeq	gene	1030455	1030961	.	+	.	ID=gene952;Dbxref=GeneID:4486915;Name=AHA_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0952
NC_008570.1	RefSeq	CDS	1030455	1030961	.	+	0	ID=cds916;Parent=gene952;Dbxref=Genbank:YP_855496.1,GeneID:4486915;Name=YP_855496.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855496.1;transl_table=11
NC_008570.1	RefSeq	gene	1031052	1031825	.	-	.	ID=gene953;Dbxref=GeneID:4486916;Name=mtnN-1;gbkey=Gene;gene=mtnN-1;gene_biotype=protein_coding;locus_tag=AHA_0953
NC_008570.1	RefSeq	CDS	1031052	1031825	.	-	0	ID=cds917;Parent=gene953;Dbxref=Genbank:YP_855497.1,GeneID:4486916;Name=YP_855497.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704;gbkey=CDS;gene=mtnN-1;product=MTA/SAH nucleosidase;protein_id=YP_855497.1;transl_table=11
NC_008570.1	RefSeq	gene	1031997	1032851	.	-	.	ID=gene954;Dbxref=GeneID:4486917;Name=AHA_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0954
NC_008570.1	RefSeq	CDS	1031997	1032851	.	-	0	ID=cds918;Parent=gene954;Dbxref=Genbank:YP_855498.1,GeneID:4486917;Name=YP_855498.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=lytic transglycosylase%2C catalytic;protein_id=YP_855498.1;transl_table=11
NC_008570.1	RefSeq	gene	1033036	1033377	.	-	.	ID=gene955;Dbxref=GeneID:4486918;Name=AHA_0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0955
NC_008570.1	RefSeq	CDS	1033036	1033377	.	-	0	ID=cds919;Parent=gene955;Dbxref=Genbank:YP_855499.1,GeneID:4486918;Name=YP_855499.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855499.1;transl_table=11
NC_008570.1	RefSeq	gene	1033429	1033617	.	-	.	ID=gene956;Dbxref=GeneID:4486919;Name=AHA_0956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0956
NC_008570.1	RefSeq	CDS	1033429	1033617	.	-	0	ID=cds920;Parent=gene956;Dbxref=Genbank:YP_855500.1,GeneID:4486919;Name=YP_855500.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855500.1;transl_table=11
NC_008570.1	RefSeq	gene	1033815	1034753	.	-	.	ID=gene957;Dbxref=GeneID:4487155;Name=AHA_0957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0957
NC_008570.1	RefSeq	CDS	1033815	1034753	.	-	0	ID=cds921;Parent=gene957;Dbxref=Genbank:YP_855501.1,GeneID:4487155;Name=YP_855501.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator XapR;protein_id=YP_855501.1;transl_table=11
NC_008570.1	RefSeq	gene	1035084	1035911	.	+	.	ID=gene958;Dbxref=GeneID:4487156;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AHA_0958
NC_008570.1	RefSeq	CDS	1035084	1035911	.	+	0	ID=cds922;Parent=gene958;Dbxref=Genbank:YP_855502.1,GeneID:4487156;Name=YP_855502.1;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;gbkey=CDS;gene=xapA;product=purine nucleoside phosphorylase;protein_id=YP_855502.1;transl_table=11
NC_008570.1	RefSeq	gene	1035937	1037196	.	+	.	ID=gene959;Dbxref=GeneID:4487157;Name=AHA_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0959
NC_008570.1	RefSeq	CDS	1035937	1037196	.	+	0	ID=cds923;Parent=gene959;Dbxref=Genbank:YP_855503.1,GeneID:4487157;Name=YP_855503.1;Note=identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804;gbkey=CDS;product=nucleoside permease;protein_id=YP_855503.1;transl_table=11
NC_008570.1	RefSeq	gene	1037259	1038062	.	+	.	ID=gene960;Dbxref=GeneID:4487158;Name=deoC-1;gbkey=Gene;gene=deoC-1;gene_biotype=protein_coding;locus_tag=AHA_0960
NC_008570.1	RefSeq	CDS	1037259	1038062	.	+	0	ID=cds924;Parent=gene960;Dbxref=Genbank:YP_855504.1,GeneID:4487158;Name=YP_855504.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC-1;product=deoxyribose-phosphate aldolase;protein_id=YP_855504.1;transl_table=11
NC_008570.1	RefSeq	gene	1038119	1039030	.	+	.	ID=gene961;Dbxref=GeneID:4487159;Name=AHA_0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0961
NC_008570.1	RefSeq	CDS	1038119	1039030	.	+	0	ID=cds925;Parent=gene961;Dbxref=Genbank:YP_855505.1,GeneID:4487159;Name=YP_855505.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=YP_855505.1;transl_table=11
NC_008570.1	RefSeq	gene	1039036	1040049	.	-	.	ID=gene962;Dbxref=GeneID:4487160;Name=AHA_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0962
NC_008570.1	RefSeq	CDS	1039036	1040049	.	-	0	ID=cds926;Parent=gene962;Dbxref=Genbank:YP_855506.1,GeneID:4487160;Name=YP_855506.1;Note=identified by similarity to GB:AAD50494.1%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=nucleotide sugar epimerase;protein_id=YP_855506.1;transl_table=11
NC_008570.1	RefSeq	gene	1040372	1040998	.	+	.	ID=gene963;Dbxref=GeneID:4487161;Name=AHA_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0963
NC_008570.1	RefSeq	CDS	1040372	1040998	.	+	0	ID=cds927;Parent=gene963;Dbxref=Genbank:YP_855507.1,GeneID:4487161;Name=YP_855507.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;product=hypothetical protein;protein_id=YP_855507.1;transl_table=11
NC_008570.1	RefSeq	gene	1041104	1041892	.	-	.	ID=gene964;Dbxref=GeneID:4487162;Name=hutD;gbkey=Gene;gene=hutD;gene_biotype=protein_coding;locus_tag=AHA_0964
NC_008570.1	RefSeq	CDS	1041104	1041892	.	-	0	ID=cds928;Parent=gene964;Dbxref=Genbank:YP_855508.1,GeneID:4487162;Name=YP_855508.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=hutD;product=hemin ABC transporter ATP-binding protein HutD;protein_id=YP_855508.1;transl_table=11
NC_008570.1	RefSeq	gene	1041907	1042935	.	-	.	ID=gene965;Dbxref=GeneID:4487163;Name=AHA_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0965
NC_008570.1	RefSeq	CDS	1041907	1042935	.	-	0	ID=cds929;Parent=gene965;Dbxref=Genbank:YP_855509.1,GeneID:4487163;Name=YP_855509.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=YP_855509.1;transl_table=11
NC_008570.1	RefSeq	gene	1042935	1043774	.	-	.	ID=gene966;Dbxref=GeneID:4487164;Name=AHA_0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0966
NC_008570.1	RefSeq	CDS	1042935	1043774	.	-	0	ID=cds930;Parent=gene966;Dbxref=Genbank:YP_855510.1,GeneID:4487164;Name=YP_855510.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=hemin ABC transporter periplasmic protein;protein_id=YP_855510.1;transl_table=11
NC_008570.1	RefSeq	gene	1043943	1044455	.	+	.	ID=gene967;Dbxref=GeneID:4487165;Name=AHA_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0967
NC_008570.1	RefSeq	CDS	1043943	1044455	.	+	0	ID=cds931;Parent=gene967;Dbxref=Genbank:YP_855511.1,GeneID:4487165;Name=YP_855511.1;Note=identified by match to protein family HMM PF06228;gbkey=CDS;product=HuvX protein;protein_id=YP_855511.1;transl_table=11
NC_008570.1	RefSeq	gene	1044452	1045009	.	+	.	ID=gene968;Dbxref=GeneID:4487166;Name=AHA_0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0968
NC_008570.1	RefSeq	CDS	1044452	1045009	.	+	0	ID=cds932;Parent=gene968;Dbxref=Genbank:YP_855512.1,GeneID:4487166;Name=YP_855512.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;product=HutZ protein;protein_id=YP_855512.1;transl_table=11
NC_008570.1	RefSeq	gene	1045080	1045484	.	-	.	ID=gene969;Dbxref=GeneID:4487167;Name=AHA_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0969
NC_008570.1	RefSeq	CDS	1045080	1045484	.	-	0	ID=cds933;Parent=gene969;Dbxref=Genbank:YP_855513.1,GeneID:4487167;Name=YP_855513.1;gbkey=CDS;product=lipoprotein;protein_id=YP_855513.1;transl_table=11
NC_008570.1	RefSeq	gene	1045524	1046075	.	-	.	ID=gene970;Dbxref=GeneID:4487168;Name=AHA_0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0970
NC_008570.1	RefSeq	CDS	1045524	1046075	.	-	0	ID=cds934;Parent=gene970;Dbxref=Genbank:YP_855514.1,GeneID:4487168;Name=YP_855514.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=YP_855514.1;transl_table=11
NC_008570.1	RefSeq	gene	1046136	1047104	.	-	.	ID=gene971;Dbxref=GeneID:4487169;Name=AHA_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0971
NC_008570.1	RefSeq	CDS	1046136	1047104	.	-	0	ID=cds935;Parent=gene971;Dbxref=Genbank:YP_855515.1,GeneID:4487169;Name=YP_855515.1;Note=identified by match to protein family HMM PF04187;gbkey=CDS;product=hypothetical protein;protein_id=YP_855515.1;transl_table=11
NC_008570.1	RefSeq	gene	1047293	1049386	.	+	.	ID=gene972;Dbxref=GeneID:4487170;Name=hgpB;gbkey=Gene;gene=hgpB;gene_biotype=protein_coding;locus_tag=AHA_0972
NC_008570.1	RefSeq	CDS	1047293	1049386	.	+	0	ID=cds936;Parent=gene972;Dbxref=Genbank:YP_855516.1,GeneID:4487170;Name=YP_855516.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01785%3B match to protein family HMM TIGR01786;gbkey=CDS;gene=hgpB;product=outer-membrane heme receptor;protein_id=YP_855516.1;transl_table=11
NC_008570.1	RefSeq	gene	1049675	1050814	.	+	.	ID=gene973;Dbxref=GeneID:4487171;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AHA_0973
NC_008570.1	RefSeq	CDS	1049675	1050814	.	+	0	ID=cds937;Parent=gene973;Dbxref=Genbank:YP_855517.1,GeneID:4487171;Name=YP_855517.1;Note=identified by match to protein family HMM PF01306%3B match to protein family HMM PF07690;gbkey=CDS;gene=hcaT;product=major facilitator superfamily transporter phenyl propionate permease (PPP) family protein;protein_id=YP_855517.1;transl_table=11
NC_008570.1	RefSeq	gene	1050899	1051108	.	-	.	ID=gene974;Dbxref=GeneID:4487172;Name=AHA_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0974
NC_008570.1	RefSeq	CDS	1050899	1051108	.	-	0	ID=cds938;Parent=gene974;Dbxref=Genbank:YP_855518.1,GeneID:4487172;Name=YP_855518.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=hypothetical protein;protein_id=YP_855518.1;transl_table=11
NC_008570.1	RefSeq	gene	1051116	1051727	.	-	.	ID=gene975;Dbxref=GeneID:4487173;Name=AHA_0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0975
NC_008570.1	RefSeq	CDS	1051116	1051727	.	-	0	ID=cds939;Parent=gene975;Dbxref=Genbank:YP_855519.1,GeneID:4487173;Name=YP_855519.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855519.1;transl_table=11
NC_008570.1	RefSeq	gene	1051947	1055447	.	+	.	ID=gene976;Dbxref=GeneID:4487517;Name=AHA_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0976
NC_008570.1	RefSeq	CDS	1051947	1055447	.	+	0	ID=cds940;Parent=gene976;Dbxref=Genbank:YP_855520.1,GeneID:4487517;Name=YP_855520.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=proline sensor PrlS;protein_id=YP_855520.1;transl_table=11
NC_008570.1	RefSeq	gene	1055820	1058429	.	+	.	ID=gene977;Dbxref=GeneID:4487518;Name=AHA_0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0977
NC_008570.1	RefSeq	CDS	1055820	1058429	.	+	0	ID=cds941;Parent=gene977;Dbxref=Genbank:YP_855521.1,GeneID:4487518;Name=YP_855521.1;Note=identified by match to protein family HMM PF00704%3B match to protein family HMM PF00801%3B match to protein family HMM PF02839;gbkey=CDS;product=chitinase;protein_id=YP_855521.1;transl_table=11
NC_008570.1	RefSeq	gene	1058502	1060880	.	+	.	ID=gene978;Dbxref=GeneID:4487519;Name=AHA_0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0978
NC_008570.1	RefSeq	CDS	1058502	1060880	.	+	0	ID=cds942;Parent=gene978;Dbxref=Genbank:YP_855522.1,GeneID:4487519;Name=YP_855522.1;gbkey=CDS;product=metalloprotease;protein_id=YP_855522.1;transl_table=11
NC_008570.1	RefSeq	gene	1060787	1062886	.	+	.	ID=gene979;Dbxref=GeneID:4487520;Name=AHA_0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0979
NC_008570.1	RefSeq	CDS	1060787	1062886	.	+	0	ID=cds943;Parent=gene979;Dbxref=Genbank:YP_855523.1,GeneID:4487520;Name=YP_855523.1;Note=identified by match to protein family HMM PF00182%3B match to protein family HMM PF00801%3B match to protein family HMM PF02839;gbkey=CDS;product=basic endochitinase;protein_id=YP_855523.1;transl_table=11
NC_008570.1	RefSeq	gene	1062945	1063745	.	-	.	ID=gene980;Dbxref=GeneID:4487521;Name=AHA_0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0980
NC_008570.1	RefSeq	CDS	1062945	1063745	.	-	0	ID=cds944;Parent=gene980;Dbxref=Genbank:YP_855525.1,GeneID:4487521;Name=YP_855525.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase A;protein_id=YP_855525.1;transl_table=11
NC_008570.1	RefSeq	gene	1063871	1064509	.	-	.	ID=gene981;Dbxref=GeneID:4487522;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AHA_0981
NC_008570.1	RefSeq	CDS	1063871	1064509	.	-	0	ID=cds945;Parent=gene981;Dbxref=Genbank:YP_855526.1,GeneID:4487522;Name=YP_855526.1;Note=complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;gene=crp;product=cAMP-regulatory protein;protein_id=YP_855526.1;transl_table=11
NC_008570.1	RefSeq	gene	1064626	1065225	.	+	.	ID=gene982;Dbxref=GeneID:4487523;Name=AHA_0982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0982
NC_008570.1	RefSeq	CDS	1064626	1065225	.	+	0	ID=cds946;Parent=gene982;Dbxref=Genbank:YP_855527.1,GeneID:4487523;Name=YP_855527.1;Note=identified by match to protein family HMM PF02566;gbkey=CDS;product=hypothetical protein;protein_id=YP_855527.1;transl_table=11
NC_008570.1	RefSeq	gene	1065275	1065571	.	+	.	ID=gene983;Dbxref=GeneID:4487524;Name=AHA_0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0983
NC_008570.1	RefSeq	CDS	1065275	1065571	.	+	0	ID=cds947;Parent=gene983;Dbxref=Genbank:YP_855528.1,GeneID:4487524;Name=YP_855528.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855528.1;transl_table=11
NC_008570.1	RefSeq	gene	1065629	1066159	.	-	.	ID=gene984;Dbxref=GeneID:4487525;Name=AHA_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0984
NC_008570.1	RefSeq	CDS	1065629	1066159	.	-	0	ID=cds948;Parent=gene984;Dbxref=Genbank:YP_855529.1,GeneID:4487525;Name=YP_855529.1;gbkey=CDS;product=lipoprotein;protein_id=YP_855529.1;transl_table=11
NC_008570.1	RefSeq	gene	1066175	1067044	.	-	.	ID=gene985;Dbxref=GeneID:4487526;Name=AHA_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0985
NC_008570.1	RefSeq	CDS	1066175	1067044	.	-	0	ID=cds949;Parent=gene985;Dbxref=Genbank:YP_855531.1,GeneID:4487526;Name=YP_855531.1;Note=identified by match to protein family HMM PF00485;gbkey=CDS;product=phosphoribulokinase%2C plasmid;protein_id=YP_855531.1;transl_table=11
NC_008570.1	RefSeq	gene	1067220	1067663	.	-	.	ID=gene986;Dbxref=GeneID:4487527;Name=AHA_0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0986
NC_008570.1	RefSeq	CDS	1067220	1067663	.	-	0	ID=cds950;Parent=gene986;Dbxref=Genbank:YP_855532.1,GeneID:4487527;Name=YP_855532.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855532.1;transl_table=11
NC_008570.1	RefSeq	gene	1067660	1068004	.	-	.	ID=gene987;Dbxref=GeneID:4487528;Name=AHA_0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0987
NC_008570.1	RefSeq	CDS	1067660	1068004	.	-	0	ID=cds951;Parent=gene987;Dbxref=Genbank:YP_855533.1,GeneID:4487528;Name=YP_855533.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855533.1;transl_table=11
NC_008570.1	RefSeq	gene	1068004	1069647	.	-	.	ID=gene988;Dbxref=GeneID:4487529;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AHA_0988
NC_008570.1	RefSeq	CDS	1068004	1069647	.	-	0	ID=cds952;Parent=gene988;Dbxref=Genbank:YP_855534.1,GeneID:4487529;Name=YP_855534.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=YP_855534.1;transl_table=11
NC_008570.1	RefSeq	gene	1069717	1070616	.	-	.	ID=gene989;Dbxref=GeneID:4487530;Name=AHA_0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0989
NC_008570.1	RefSeq	CDS	1069717	1070616	.	-	0	ID=cds953;Parent=gene989;Dbxref=Genbank:YP_855535.1,GeneID:4487530;Name=YP_855535.1;Note=identified by match to protein family HMM PF01522;gbkey=CDS;product=polysaccharide deacetylase;protein_id=YP_855535.1;transl_table=11
NC_008570.1	RefSeq	gene	1070609	1072600	.	-	.	ID=gene990;Dbxref=GeneID:4487531;Name=AHA_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0990
NC_008570.1	RefSeq	CDS	1070609	1072600	.	-	0	ID=cds954;Parent=gene990;Dbxref=Genbank:YP_855536.1,GeneID:4487531;Name=YP_855536.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=YP_855536.1;transl_table=11
NC_008570.1	RefSeq	gene	1072597	1073577	.	-	.	ID=gene991;Dbxref=GeneID:4487532;Name=AHA_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0991
NC_008570.1	RefSeq	CDS	1072597	1073577	.	-	0	ID=cds955;Parent=gene991;Dbxref=Genbank:YP_855537.1,GeneID:4487532;Name=YP_855537.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=UDP-phosphate 4-amino-4-deoxy-L-arabinose transferase;protein_id=YP_855537.1;transl_table=11
NC_008570.1	RefSeq	gene	1073584	1074720	.	-	.	ID=gene992;Dbxref=GeneID:4487533;Name=AHA_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0992
NC_008570.1	RefSeq	CDS	1073584	1074720	.	-	0	ID=cds956;Parent=gene992;Dbxref=Genbank:YP_855538.1,GeneID:4487533;Name=YP_855538.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=YP_855538.1;transl_table=11
NC_008570.1	RefSeq	gene	1074941	1076287	.	+	.	ID=gene993;Dbxref=GeneID:4487534;Name=AHA_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0993
NC_008570.1	RefSeq	CDS	1074941	1076287	.	+	0	ID=cds957;Parent=gene993;Dbxref=Genbank:YP_855539.1,GeneID:4487534;Name=YP_855539.1;Note=identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026;gbkey=CDS;product=UDP-glucose dehydrogenase;protein_id=YP_855539.1;transl_table=11
NC_008570.1	RefSeq	gene	1076717	1076959	.	-	.	ID=gene994;Dbxref=GeneID:4487535;Name=AHA_0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0994
NC_008570.1	RefSeq	CDS	1076717	1076959	.	-	0	ID=cds958;Parent=gene994;Dbxref=Genbank:YP_855540.1,GeneID:4487535;Name=YP_855540.1;Note=identified by match to protein family HMM PF06794;gbkey=CDS;product=enolase;protein_id=YP_855540.1;transl_table=11
NC_008570.1	RefSeq	gene	1077049	1078203	.	+	.	ID=gene995;Dbxref=GeneID:4487536;Name=AHA_0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0996
NC_008570.1	RefSeq	CDS	1077049	1078203	.	+	0	ID=cds959;Parent=gene995;Dbxref=Genbank:YP_855541.1,GeneID:4487536;Name=YP_855541.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_855541.1;transl_table=11
NC_008570.1	RefSeq	gene	1078185	1079267	.	-	.	ID=gene996;Dbxref=GeneID:4487174;Name=AHA_0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0995
NC_008570.1	RefSeq	CDS	1078185	1079267	.	-	0	ID=cds960;Parent=gene996;Dbxref=Genbank:YP_855542.1,GeneID:4487174;Name=YP_855542.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_855542.1;transl_table=11
NC_008570.1	RefSeq	gene	1079236	1080135	.	-	.	ID=gene997;Dbxref=GeneID:4487175;Name=AHA_0997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0997
NC_008570.1	RefSeq	CDS	1079236	1080135	.	-	0	ID=cds961;Parent=gene997;Dbxref=Genbank:YP_855543.1,GeneID:4487175;Name=YP_855543.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01584;gbkey=CDS;product=chemotaxis protein CheV;protein_id=YP_855543.1;transl_table=11
NC_008570.1	RefSeq	gene	1080317	1080865	.	-	.	ID=gene998;Dbxref=GeneID:4487176;Name=AHA_0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0998
NC_008570.1	RefSeq	CDS	1080317	1080865	.	-	0	ID=cds962;Parent=gene998;Dbxref=Genbank:YP_855544.1,GeneID:4487176;Name=YP_855544.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855544.1;transl_table=11
NC_008570.1	RefSeq	gene	1081043	1081249	.	+	.	ID=gene999;Dbxref=GeneID:4487177;Name=AHA_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_0999
NC_008570.1	RefSeq	CDS	1081043	1081249	.	+	0	ID=cds963;Parent=gene999;Dbxref=Genbank:YP_855545.1,GeneID:4487177;Name=YP_855545.1;Note=identified by match to protein family HMM TIGR02443;gbkey=CDS;product=hypothetical protein;protein_id=YP_855545.1;transl_table=11
NC_008570.1	RefSeq	gene	1081396	1082034	.	+	.	ID=gene1000;Dbxref=GeneID:4487178;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AHA_1000
NC_008570.1	RefSeq	CDS	1081396	1082034	.	+	0	ID=cds964;Parent=gene1000;Dbxref=Genbank:YP_855546.1,GeneID:4487178;Name=YP_855546.1;Note=identified by similarity to SP:P0A9L2%3B match to protein family HMM PF00254;gbkey=CDS;gene=slyD;product=FKBP-type peptidyl-prolyl cis-trans isomerase SlyD;protein_id=YP_855546.1;transl_table=11
NC_008570.1	RefSeq	gene	1082099	1082314	.	-	.	ID=gene1001;Dbxref=GeneID:4487179;Name=AHA_1001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1001
NC_008570.1	RefSeq	CDS	1082099	1082314	.	-	0	ID=cds965;Parent=gene1001;Dbxref=Genbank:YP_855547.1,GeneID:4487179;Name=YP_855547.1;Note=identified by match to protein family HMM PF04102;gbkey=CDS;product=hypothetical protein;protein_id=YP_855547.1;transl_table=11
NC_008570.1	RefSeq	gene	1082329	1083297	.	-	.	ID=gene1002;Dbxref=GeneID:4487180;Name=AHA_1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1002
NC_008570.1	RefSeq	CDS	1082329	1083297	.	-	0	ID=cds966;Parent=gene1002;Dbxref=Genbank:YP_855548.1,GeneID:4487180;Name=YP_855548.1;Note=identified by match to protein family HMM PF00400;gbkey=CDS;product=vegetatible incompatibility protein HET-E-1;protein_id=YP_855548.1;transl_table=11
NC_008570.1	RefSeq	gene	1083417	1084223	.	+	.	ID=gene1003;Dbxref=GeneID:4487181;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AHA_1003
NC_008570.1	RefSeq	CDS	1083417	1084223	.	+	0	ID=cds967;Parent=gene1003;Dbxref=Genbank:YP_855549.1,GeneID:4487181;Name=YP_855549.1;Note=identified by similarity to SP:P45523%3B match to protein family HMM PF00254%3B match to protein family HMM PF01346;gbkey=CDS;gene=fkpA;product=FKBP-type peptidyl-prolyl cis-trans isomerase FkpA;protein_id=YP_855549.1;transl_table=11
NC_008570.1	RefSeq	gene	1084375	1085781	.	+	.	ID=gene1004;Dbxref=GeneID:4487182;Name=AHA_1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1004
NC_008570.1	RefSeq	CDS	1084375	1085781	.	+	0	ID=cds968;Parent=gene1004;Dbxref=Genbank:YP_855550.1,GeneID:4487182;Name=YP_855550.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=sigma-54 factor interaction domain-containing protein;protein_id=YP_855550.1;transl_table=11
NC_008570.1	RefSeq	gene	1085871	1086740	.	-	.	ID=gene1005;Dbxref=GeneID:4487183;Name=AHA_1005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1005
NC_008570.1	RefSeq	CDS	1085871	1086740	.	-	0	ID=cds969;Parent=gene1005;Dbxref=Genbank:YP_855551.1,GeneID:4487183;Name=YP_855551.1;Note=identified by match to protein family HMM PF07719;gbkey=CDS;product=hypothetical protein;protein_id=YP_855551.1;transl_table=11
NC_008570.1	RefSeq	gene	1086854	1087189	.	-	.	ID=gene1006;Dbxref=GeneID:4487184;Name=AHA_1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1006
NC_008570.1	RefSeq	CDS	1086854	1087189	.	-	0	ID=cds970;Parent=gene1006;Dbxref=Genbank:YP_855552.1,GeneID:4487184;Name=YP_855552.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855552.1;transl_table=11
NC_008570.1	RefSeq	gene	1087316	1087657	.	-	.	ID=gene1007;Dbxref=GeneID:4487185;Name=AHA_1007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1007
NC_008570.1	RefSeq	CDS	1087316	1087657	.	-	0	ID=cds971;Parent=gene1007;Dbxref=Genbank:YP_855553.1,GeneID:4487185;Name=YP_855553.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855553.1;transl_table=11
NC_008570.1	RefSeq	gene	1087744	1089582	.	-	.	ID=gene1008;Dbxref=GeneID:4487186;Name=AHA_1008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1008
NC_008570.1	RefSeq	CDS	1087744	1089582	.	-	0	ID=cds972;Parent=gene1008;Dbxref=Genbank:YP_855554.1,GeneID:4487186;Name=YP_855554.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=5'-nucleotidase;protein_id=YP_855554.1;transl_table=11
NC_008570.1	RefSeq	gene	1089815	1091356	.	-	.	ID=gene1009;Dbxref=GeneID:4487187;Name=AHA_1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1009
NC_008570.1	RefSeq	CDS	1089815	1091356	.	-	0	ID=cds973;Parent=gene1009;Dbxref=Genbank:YP_855555.1,GeneID:4487187;Name=YP_855555.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_855555.1;transl_table=11
NC_008570.1	RefSeq	gene	1091535	1092389	.	-	.	ID=gene1010;Dbxref=GeneID:4487188;Name=AHA_1010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1010
NC_008570.1	RefSeq	CDS	1091535	1092389	.	-	0	ID=cds974;Parent=gene1010;Dbxref=Genbank:YP_855556.1,GeneID:4487188;Name=YP_855556.1;Note=identified by match to protein family HMM PF04280;gbkey=CDS;product=import inner membrane translocase subunit Tim44;protein_id=YP_855556.1;transl_table=11
NC_008570.1	RefSeq	gene	1092570	1092671	.	+	.	ID=gene1011;Dbxref=GeneID:4487189;Name=AHA_1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1011
NC_008570.1	RefSeq	CDS	1092570	1092671	.	+	0	ID=cds975;Parent=gene1011;Dbxref=Genbank:YP_855557.1,GeneID:4487189;Name=YP_855557.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855557.1;transl_table=11
NC_008570.1	RefSeq	gene	1092822	1094216	.	+	.	ID=gene1012;Dbxref=GeneID:4487190;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AHA_1012
NC_008570.1	RefSeq	CDS	1092822	1094216	.	+	0	ID=cds976;Parent=gene1012;Dbxref=Genbank:YP_855558.1,GeneID:4487190;Name=YP_855558.1;Note=identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=YP_855558.1;transl_table=11
NC_008570.1	RefSeq	gene	1094283	1094375	.	+	.	ID=gene1013;Dbxref=GeneID:4487191;Name=AHA_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1013
NC_008570.1	RefSeq	CDS	1094283	1094375	.	+	0	ID=cds977;Parent=gene1013;Dbxref=Genbank:YP_855559.1,GeneID:4487191;Name=YP_855559.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855559.1;transl_table=11
NC_008570.1	RefSeq	gene	1094442	1094534	.	+	.	ID=gene1014;Dbxref=GeneID:4487192;Name=AHA_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1014
NC_008570.1	RefSeq	CDS	1094442	1094534	.	+	0	ID=cds978;Parent=gene1014;Dbxref=Genbank:YP_855560.1,GeneID:4487192;Name=YP_855560.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855560.1;transl_table=11
NC_008570.1	RefSeq	gene	1094685	1095758	.	+	.	ID=gene1015;Dbxref=GeneID:4488780;Name=alr-1;gbkey=Gene;gene=alr-1;gene_biotype=protein_coding;locus_tag=AHA_1015
NC_008570.1	RefSeq	CDS	1094685	1095758	.	+	0	ID=cds979;Parent=gene1015;Dbxref=Genbank:YP_855561.1,GeneID:4488780;Name=YP_855561.1;Note=identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr-1;product=alanine racemase;protein_id=YP_855561.1;transl_table=11
NC_008570.1	RefSeq	gene	1095872	1096120	.	-	.	ID=gene1016;Dbxref=GeneID:4488781;Name=AHA_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1016
NC_008570.1	RefSeq	CDS	1095872	1096120	.	-	0	ID=cds980;Parent=gene1016;Dbxref=Genbank:YP_855562.1,GeneID:4488781;Name=YP_855562.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=ferredoxin;protein_id=YP_855562.1;transl_table=11
NC_008570.1	RefSeq	gene	1096122	1097483	.	-	.	ID=gene1017;Dbxref=GeneID:4488782;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AHA_1017
NC_008570.1	RefSeq	CDS	1096122	1097483	.	-	0	ID=cds981;Parent=gene1017;Dbxref=Genbank:YP_855563.1,GeneID:4488782;Name=YP_855563.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;gene=yegQ;product=U32 family peptidase;protein_id=YP_855563.1;transl_table=11
NC_008570.1	RefSeq	gene	1097716	1098453	.	-	.	ID=gene1018;Dbxref=GeneID:4488783;Name=AHA_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1018
NC_008570.1	RefSeq	CDS	1097716	1098453	.	-	0	ID=cds982;Parent=gene1018;Dbxref=Genbank:YP_855564.1,GeneID:4488783;Name=YP_855564.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_855564.1;transl_table=11
NC_008570.1	RefSeq	gene	1098706	1099428	.	+	.	ID=gene1019;Dbxref=GeneID:4488784;Name=AHA_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1019
NC_008570.1	RefSeq	CDS	1098706	1099428	.	+	0	ID=cds983;Parent=gene1019;Dbxref=Genbank:YP_855565.1,GeneID:4488784;Name=YP_855565.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855565.1;transl_table=11
NC_008570.1	RefSeq	gene	1099458	1099937	.	+	.	ID=gene1020;Dbxref=GeneID:4488785;Name=AHA_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1020
NC_008570.1	RefSeq	CDS	1099458	1099937	.	+	0	ID=cds984;Parent=gene1020;Dbxref=Genbank:YP_855566.1,GeneID:4488785;Name=YP_855566.1;gbkey=CDS;product=adhesin;protein_id=YP_855566.1;transl_table=11
NC_008570.1	RefSeq	gene	1100017	1102452	.	+	.	ID=gene1021;Dbxref=GeneID:4488786;Name=AHA_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1021
NC_008570.1	RefSeq	CDS	1100017	1102452	.	+	0	ID=cds985;Parent=gene1021;Dbxref=Genbank:YP_855567.1,GeneID:4488786;Name=YP_855567.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855567.1;transl_table=11
NC_008570.1	RefSeq	gene	1102472	1103629	.	+	.	ID=gene1022;Dbxref=GeneID:4488787;Name=AHA_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1022
NC_008570.1	RefSeq	CDS	1102472	1103629	.	+	0	ID=cds986;Parent=gene1022;Dbxref=Genbank:YP_855568.1,GeneID:4488787;Name=YP_855568.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855568.1;transl_table=11
NC_008570.1	RefSeq	gene	1103654	1104292	.	-	.	ID=gene1023;Dbxref=GeneID:4488788;Name=AHA_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1023
NC_008570.1	RefSeq	CDS	1103654	1104292	.	-	0	ID=cds987;Parent=gene1023;Dbxref=Genbank:YP_855569.1,GeneID:4488788;Name=YP_855569.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=LuxR family DNA-binding response regulator;protein_id=YP_855569.1;transl_table=11
NC_008570.1	RefSeq	gene	1104414	1107842	.	+	.	ID=gene1024;Dbxref=GeneID:4488789;Name=AHA_1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1025
NC_008570.1	RefSeq	CDS	1104414	1107842	.	+	0	ID=cds988;Parent=gene1024;Dbxref=Genbank:YP_855570.1,GeneID:4488789;Name=YP_855570.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=response regulator/sensor histidine kinase;protein_id=YP_855570.1;transl_table=11
NC_008570.1	RefSeq	gene	1108232	1108316	.	-	.	ID=gene1025;Dbxref=GeneID:4488790;Name=AHA_1026;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1026
NC_008570.1	RefSeq	tRNA	1108232	1108316	.	-	.	ID=rna35;Parent=gene1025;Dbxref=GeneID:4488790;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	1108232	1108316	.	-	.	ID=id36;Parent=rna35;Dbxref=GeneID:4488790;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	1108348	1108432	.	-	.	ID=gene1026;Dbxref=GeneID:4488791;Name=AHA_1027;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1027
NC_008570.1	RefSeq	tRNA	1108348	1108432	.	-	.	ID=rna36;Parent=gene1026;Dbxref=GeneID:4488791;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	1108348	1108432	.	-	.	ID=id37;Parent=rna36;Dbxref=GeneID:4488791;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	1108464	1108548	.	-	.	ID=gene1027;Dbxref=GeneID:4488792;Name=AHA_1028;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1028
NC_008570.1	RefSeq	tRNA	1108464	1108548	.	-	.	ID=rna37;Parent=gene1027;Dbxref=GeneID:4488792;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	1108464	1108548	.	-	.	ID=id38;Parent=rna37;Dbxref=GeneID:4488792;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	1108869	1110116	.	+	.	ID=gene1028;Dbxref=GeneID:4488793;Name=AHA_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1029
NC_008570.1	RefSeq	CDS	1108869	1110116	.	+	0	ID=cds989;Parent=gene1028;Dbxref=Genbank:YP_855571.1,GeneID:4488793;Name=YP_855571.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01976;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_855571.1;transl_table=11
NC_008570.1	RefSeq	gene	1110170	1111231	.	-	.	ID=gene1029;Dbxref=GeneID:4488794;Name=cheB-1;gbkey=Gene;gene=cheB-1;gene_biotype=protein_coding;locus_tag=AHA_1030
NC_008570.1	RefSeq	CDS	1110170	1111231	.	-	0	ID=cds990;Parent=gene1029;Dbxref=Genbank:YP_855572.1,GeneID:4488794;Name=YP_855572.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;gene=cheB-1;product=chemotaxis-specific methylesterase;protein_id=YP_855572.1;transl_table=11
NC_008570.1	RefSeq	gene	1111242	1111712	.	-	.	ID=gene1030;Dbxref=GeneID:4488795;Name=AHA_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1031
NC_008570.1	RefSeq	CDS	1111242	1111712	.	-	0	ID=cds991;Parent=gene1030;Dbxref=Genbank:YP_855573.1,GeneID:4488795;Name=YP_855573.1;Note=catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors;gbkey=CDS;product=chemoreceptor glutamine deamidase CheD;protein_id=YP_855573.1;transl_table=11
NC_008570.1	RefSeq	gene	1111723	1112526	.	-	.	ID=gene1031;Dbxref=GeneID:4488796;Name=cheR-1;gbkey=Gene;gene=cheR-1;gene_biotype=protein_coding;locus_tag=AHA_1032
NC_008570.1	RefSeq	CDS	1111723	1112526	.	-	0	ID=cds992;Parent=gene1031;Dbxref=Genbank:YP_855574.1,GeneID:4488796;Name=YP_855574.1;Note=identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705;gbkey=CDS;gene=cheR-1;product=chemotaxis protein CheR;protein_id=YP_855574.1;transl_table=11
NC_008570.1	RefSeq	gene	1112583	1114751	.	-	.	ID=gene1032;Dbxref=GeneID:4488797;Name=AHA_1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1033
NC_008570.1	RefSeq	CDS	1112583	1114751	.	-	0	ID=cds993;Parent=gene1032;Dbxref=Genbank:YP_855575.1,GeneID:4488797;Name=YP_855575.1;Note=identified by match to protein family HMM PF00015;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855575.1;transl_table=11
NC_008570.1	RefSeq	gene	1114822	1115394	.	-	.	ID=gene1033;Dbxref=GeneID:4488798;Name=cheW-1;gbkey=Gene;gene=cheW-1;gene_biotype=protein_coding;locus_tag=AHA_1034
NC_008570.1	RefSeq	CDS	1114822	1115394	.	-	0	ID=cds994;Parent=gene1033;Dbxref=Genbank:YP_855576.1,GeneID:4488798;Name=YP_855576.1;Note=identified by similarity to GB:AAB53941.1%3B match to protein family HMM PF01584;gbkey=CDS;gene=cheW-1;product=chemotaxis protein CheW;protein_id=YP_855576.1;transl_table=11
NC_008570.1	RefSeq	gene	1115407	1117329	.	-	.	ID=gene1034;Dbxref=GeneID:4488799;Name=AHA_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1035
NC_008570.1	RefSeq	CDS	1115407	1117329	.	-	0	ID=cds995;Parent=gene1034;Dbxref=Genbank:YP_855577.1,GeneID:4488799;Name=YP_855577.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855577.1;transl_table=11
NC_008570.1	RefSeq	gene	1117345	1119558	.	-	.	ID=gene1035;Dbxref=GeneID:4489484;Name=cheA-1;gbkey=Gene;gene=cheA-1;gene_biotype=protein_coding;locus_tag=AHA_1036
NC_008570.1	RefSeq	CDS	1117345	1119558	.	-	0	ID=cds996;Parent=gene1035;Dbxref=Genbank:YP_855578.1,GeneID:4489484;Name=YP_855578.1;Note=identified by similarity to SP:P07363%3B match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895;gbkey=CDS;gene=cheA-1;product=chemotaxis protein CheA;protein_id=YP_855578.1;transl_table=11
NC_008570.1	RefSeq	gene	1119585	1119911	.	-	.	ID=gene1036;Dbxref=GeneID:4489485;Name=rsbV;gbkey=Gene;gene=rsbV;gene_biotype=protein_coding;locus_tag=AHA_1037
NC_008570.1	RefSeq	CDS	1119585	1119911	.	-	0	ID=cds997;Parent=gene1036;Dbxref=Genbank:YP_855579.1,GeneID:4489485;Name=YP_855579.1;Note=identified by similarity to SP:P17903%3B match to protein family HMM PF01740%3B match to protein family HMM TIGR00377;gbkey=CDS;gene=rsbV;product=anti-sigma-B factor antagonist;protein_id=YP_855579.1;transl_table=11
NC_008570.1	RefSeq	gene	1119926	1120294	.	-	.	ID=gene1037;Dbxref=GeneID:4489486;Name=AHA_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1038
NC_008570.1	RefSeq	CDS	1119926	1120294	.	-	0	ID=cds998;Parent=gene1037;Dbxref=Genbank:YP_855580.1,GeneID:4489486;Name=YP_855580.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=chemotaxis protein CheY;protein_id=YP_855580.1;transl_table=11
NC_008570.1	RefSeq	gene	1120304	1121518	.	-	.	ID=gene1038;Dbxref=GeneID:4489487;Name=AHA_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1039
NC_008570.1	RefSeq	CDS	1120304	1121518	.	-	0	ID=cds999;Parent=gene1038;Dbxref=Genbank:YP_855581.1,GeneID:4489487;Name=YP_855581.1;Note=identified by match to protein family HMM PF00015;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855581.1;transl_table=11
NC_008570.1	RefSeq	gene	1121822	1122910	.	-	.	ID=gene1039;Dbxref=GeneID:4489488;Name=AHA_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1040
NC_008570.1	RefSeq	CDS	1121822	1122910	.	-	0	ID=cds1000;Parent=gene1039;Dbxref=Genbank:YP_855582.1,GeneID:4489488;Name=YP_855582.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs%3B in Pseudomonas this protein is involved in quinolone signal biosynthesis;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_855582.1;transl_table=11
NC_008570.1	RefSeq	gene	1123113	1124054	.	+	.	ID=gene1040;Dbxref=GeneID:4489489;Name=AHA_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1041
NC_008570.1	RefSeq	CDS	1123113	1124054	.	+	0	ID=cds1001;Parent=gene1040;Dbxref=Genbank:YP_855583.1,GeneID:4489489;Name=YP_855583.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855583.1;transl_table=11
NC_008570.1	RefSeq	gene	1124090	1124791	.	+	.	ID=gene1041;Dbxref=GeneID:4489490;Name=AHA_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1042
NC_008570.1	RefSeq	CDS	1124090	1124791	.	+	0	ID=cds1002;Parent=gene1041;Dbxref=Genbank:YP_855584.1,GeneID:4489490;Name=YP_855584.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_855584.1;transl_table=11
NC_008570.1	RefSeq	gene	1124894	1126753	.	+	.	ID=gene1042;Dbxref=GeneID:4489491;Name=AHA_1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1043
NC_008570.1	RefSeq	CDS	1124894	1126753	.	+	0	ID=cds1003;Parent=gene1042;Dbxref=Genbank:YP_855585.1,GeneID:4489491;Name=YP_855585.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;product=U32 family peptidase;protein_id=YP_855585.1;transl_table=11
NC_008570.1	RefSeq	gene	1126842	1127504	.	+	.	ID=gene1043;Dbxref=GeneID:4489492;Name=AHA_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1044
NC_008570.1	RefSeq	CDS	1126842	1127504	.	+	0	ID=cds1004;Parent=gene1043;Dbxref=Genbank:YP_855586.1,GeneID:4489492;Name=YP_855586.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855586.1;transl_table=11
NC_008570.1	RefSeq	gene	1127520	1127996	.	-	.	ID=gene1044;Dbxref=GeneID:4489493;Name=AHA_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1045
NC_008570.1	RefSeq	CDS	1127520	1127996	.	-	0	ID=cds1005;Parent=gene1044;Dbxref=Genbank:YP_855587.1,GeneID:4489493;Name=YP_855587.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=YP_855587.1;transl_table=11
NC_008570.1	RefSeq	gene	1127993	1129558	.	-	.	ID=gene1045;Dbxref=GeneID:4489494;Name=AHA_1046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1046
NC_008570.1	RefSeq	CDS	1127993	1129558	.	-	0	ID=cds1006;Parent=gene1045;Dbxref=Genbank:YP_855588.1,GeneID:4489494;Name=YP_855588.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF00730%3B match to protein family HMM PF02805%3B match to protein family HMM PF06029;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_855588.1;transl_table=11
NC_008570.1	RefSeq	gene	1129768	1130169	.	+	.	ID=gene1046;Dbxref=GeneID:4489495;Name=AHA_1047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1047
NC_008570.1	RefSeq	CDS	1129768	1130169	.	+	0	ID=cds1007;Parent=gene1046;Dbxref=Genbank:YP_855589.1,GeneID:4489495;Name=YP_855589.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855589.1;transl_table=11
NC_008570.1	RefSeq	gene	1130239	1131813	.	-	.	ID=gene1047;Dbxref=GeneID:4489496;Name=AHA_1048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1048
NC_008570.1	RefSeq	CDS	1130239	1131813	.	-	0	ID=cds1008;Parent=gene1047;Dbxref=Genbank:YP_855590.1,GeneID:4489496;Name=YP_855590.1;Note=identified by match to protein family HMM PF02074;gbkey=CDS;product=thermostable carboxypeptidase 1;protein_id=YP_855590.1;transl_table=11
NC_008570.1	RefSeq	gene	1131851	1132432	.	-	.	ID=gene1048;Dbxref=GeneID:4489497;Name=AHA_1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1049
NC_008570.1	RefSeq	CDS	1131851	1132432	.	-	0	ID=cds1009;Parent=gene1048;Dbxref=Genbank:YP_855591.1,GeneID:4489497;Name=YP_855591.1;Note=identified by match to protein family HMM PF01713;gbkey=CDS;product=Smr domain-containing protein;protein_id=YP_855591.1;transl_table=11
NC_008570.1	RefSeq	gene	1132586	1132771	.	-	.	ID=gene1049;Dbxref=GeneID:4489498;Name=AHA_1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1050
NC_008570.1	RefSeq	CDS	1132586	1132771	.	-	0	ID=cds1010;Parent=gene1049;Dbxref=Genbank:YP_855592.1,GeneID:4489498;Name=YP_855592.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855592.1;transl_table=11
NC_008570.1	RefSeq	gene	1132904	1133797	.	-	.	ID=gene1050;Dbxref=GeneID:4489499;Name=AHA_1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1051
NC_008570.1	RefSeq	CDS	1132904	1133797	.	-	0	ID=cds1011;Parent=gene1050;Dbxref=Genbank:YP_855593.1,GeneID:4489499;Name=YP_855593.1;Note=identified by match to protein family HMM PF07446;gbkey=CDS;product=GumN protein;protein_id=YP_855593.1;transl_table=11
NC_008570.1	RefSeq	gene	1134385	1135212	.	-	.	ID=gene1051;Dbxref=GeneID:4489500;Name=AHA_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1052
NC_008570.1	RefSeq	CDS	1134385	1135212	.	-	0	ID=cds1012;Parent=gene1051;Dbxref=Genbank:YP_855594.1,GeneID:4489500;Name=YP_855594.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short-chain dehydrogenase/reductase;protein_id=YP_855594.1;transl_table=11
NC_008570.1	RefSeq	gene	1135331	1136776	.	-	.	ID=gene1052;Dbxref=GeneID:4489501;Name=AHA_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1053
NC_008570.1	RefSeq	CDS	1135331	1136776	.	-	0	ID=cds1013;Parent=gene1052;Dbxref=Genbank:YP_855595.1,GeneID:4489501;Name=YP_855595.1;Note=identified by match to protein family HMM PF03573;gbkey=CDS;product=outermembrane porin;protein_id=YP_855595.1;transl_table=11
NC_008570.1	RefSeq	gene	1137283	1139220	.	-	.	ID=gene1053;Dbxref=GeneID:4489502;Name=AHA_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1054
NC_008570.1	RefSeq	CDS	1137283	1139220	.	-	0	ID=cds1014;Parent=gene1053;Dbxref=Genbank:YP_855596.1,GeneID:4489502;Name=YP_855596.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855596.1;transl_table=11
NC_008570.1	RefSeq	gene	1139338	1140234	.	-	.	ID=gene1054;Dbxref=GeneID:4490762;Name=AHA_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1055
NC_008570.1	RefSeq	CDS	1139338	1140234	.	-	0	ID=cds1015;Parent=gene1054;Dbxref=Genbank:YP_855597.1,GeneID:4490762;Name=YP_855597.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=YP_855597.1;transl_table=11
NC_008570.1	RefSeq	gene	1140329	1141831	.	-	.	ID=gene1055;Dbxref=GeneID:4490763;Name=AHA_1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1056
NC_008570.1	RefSeq	CDS	1140329	1141831	.	-	0	ID=cds1016;Parent=gene1055;Dbxref=Genbank:YP_855598.1,GeneID:4490763;Name=YP_855598.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791;gbkey=CDS;product=GntP protein;protein_id=YP_855598.1;transl_table=11
NC_008570.1	RefSeq	gene	1141828	1142772	.	-	.	ID=gene1056;Dbxref=GeneID:4490764;Name=AHA_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1057
NC_008570.1	RefSeq	CDS	1141828	1142772	.	-	0	ID=cds1017;Parent=gene1056;Dbxref=Genbank:YP_855599.1,GeneID:4490764;Name=YP_855599.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=NAD-dependent epimerase/dehydratase;protein_id=YP_855599.1;transl_table=11
NC_008570.1	RefSeq	gene	1142808	1143581	.	-	.	ID=gene1057;Dbxref=GeneID:4490765;Name=AHA_1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1058
NC_008570.1	RefSeq	CDS	1142808	1143581	.	-	0	ID=cds1018;Parent=gene1057;Dbxref=Genbank:YP_855600.1,GeneID:4490765;Name=YP_855600.1;Note=identified by match to protein family HMM PF01261;gbkey=CDS;product=AP endonuclease;protein_id=YP_855600.1;transl_table=11
NC_008570.1	RefSeq	gene	1143578	1144210	.	-	.	ID=gene1058;Dbxref=GeneID:4490766;Name=AHA_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1059
NC_008570.1	RefSeq	CDS	1143578	1144210	.	-	0	ID=cds1019;Parent=gene1058;Dbxref=Genbank:YP_855601.1,GeneID:4490766;Name=YP_855601.1;Note=identified by match to protein family HMM PF00596;gbkey=CDS;product=aldolase;protein_id=YP_855601.1;transl_table=11
NC_008570.1	RefSeq	gene	1144203	1145453	.	-	.	ID=gene1059;Dbxref=GeneID:4490767;Name=AHA_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1060
NC_008570.1	RefSeq	CDS	1144203	1145453	.	-	0	ID=cds1020;Parent=gene1059;Dbxref=Genbank:YP_855602.1,GeneID:4490767;Name=YP_855602.1;Note=identified by match to protein family HMM PF07005;gbkey=CDS;product=hypothetical protein;protein_id=YP_855602.1;transl_table=11
NC_008570.1	RefSeq	gene	1145450	1146358	.	-	.	ID=gene1060;Dbxref=GeneID:4490768;Name=AHA_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1061
NC_008570.1	RefSeq	CDS	1145450	1146358	.	-	0	ID=cds1021;Parent=gene1060;Dbxref=Genbank:YP_855603.1,GeneID:4490768;Name=YP_855603.1;Note=identified by match to protein family HMM PF03446;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=YP_855603.1;transl_table=11
NC_008570.1	RefSeq	gene	1146614	1147405	.	+	.	ID=gene1061;Dbxref=GeneID:4490769;Name=AHA_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1062
NC_008570.1	RefSeq	CDS	1146614	1147405	.	+	0	ID=cds1022;Parent=gene1061;Dbxref=Genbank:YP_855604.1,GeneID:4490769;Name=YP_855604.1;Note=identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=YP_855604.1;transl_table=11
NC_008570.1	RefSeq	gene	1147784	1150480	.	-	.	ID=gene1062;Dbxref=GeneID:4490770;Name=AHA_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1063
NC_008570.1	RefSeq	CDS	1147784	1150480	.	-	0	ID=cds1023;Parent=gene1062;Dbxref=Genbank:YP_855605.1,GeneID:4490770;Name=YP_855605.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855605.1;transl_table=11
NC_008570.1	RefSeq	gene	1151726	1154476	.	+	.	ID=gene1063;Dbxref=GeneID:4490771;Name=AHA_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1064
NC_008570.1	RefSeq	CDS	1151726	1154476	.	+	0	ID=cds1024;Parent=gene1063;Dbxref=Genbank:YP_855606.1,GeneID:4490771;Name=YP_855606.1;Note=identified by similarity to SP:P11922%3B match to protein family HMM PF01476;gbkey=CDS;product=invasin family protein;protein_id=YP_855606.1;transl_table=11
NC_008570.1	RefSeq	gene	1154664	1155332	.	+	.	ID=gene1064;Dbxref=GeneID:4490772;Name=AHA_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1065
NC_008570.1	RefSeq	CDS	1154664	1155332	.	+	0	ID=cds1025;Parent=gene1064;Dbxref=Genbank:YP_855607.1,GeneID:4490772;Name=YP_855607.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855607.1;transl_table=11
NC_008570.1	RefSeq	gene	1155644	1157251	.	+	.	ID=gene1065;Dbxref=GeneID:4490773;Name=AHA_1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1066
NC_008570.1	RefSeq	CDS	1155644	1157251	.	+	0	ID=cds1026;Parent=gene1065;Dbxref=Genbank:YP_855608.1,GeneID:4490773;Name=YP_855608.1;Note=identified by similarity to SP:P11922%3B match to protein family HMM PF02369;gbkey=CDS;product=intimin/invasin family protein;protein_id=YP_855608.1;transl_table=11
NC_008570.1	RefSeq	gene	1157771	1158517	.	+	.	ID=gene1066;Dbxref=GeneID:4490774;Name=AHA_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1067
NC_008570.1	RefSeq	CDS	1157771	1158517	.	+	0	ID=cds1027;Parent=gene1066;Dbxref=Genbank:YP_855609.1,GeneID:4490774;Name=YP_855609.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855609.1;transl_table=11
NC_008570.1	RefSeq	gene	1158514	1160730	.	+	.	ID=gene1067;Dbxref=GeneID:4490775;Name=AHA_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1068
NC_008570.1	RefSeq	CDS	1158514	1160730	.	+	0	ID=cds1028;Parent=gene1067;Dbxref=Genbank:YP_855610.1,GeneID:4490775;Name=YP_855610.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensory box/GGDEF family protein;protein_id=YP_855610.1;transl_table=11
NC_008570.1	RefSeq	gene	1161152	1161820	.	-	.	ID=gene1068;Dbxref=GeneID:4490776;Name=AHA_1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1069
NC_008570.1	RefSeq	CDS	1161152	1161820	.	-	0	ID=cds1029;Parent=gene1068;Dbxref=Genbank:YP_855611.1,GeneID:4490776;Name=YP_855611.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulator;protein_id=YP_855611.1;transl_table=11
NC_008570.1	RefSeq	gene	1162913	1163206	.	+	.	ID=gene1069;Dbxref=GeneID:4490777;Name=AHA_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1070
NC_008570.1	RefSeq	CDS	1162913	1163206	.	+	0	ID=cds1030;Parent=gene1069;Dbxref=Genbank:YP_855612.1,GeneID:4490777;Name=YP_855612.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;product=transcriptional activator protein;protein_id=YP_855612.1;transl_table=11
NC_008570.1	RefSeq	gene	1163620	1163766	.	-	.	ID=gene1070;Dbxref=GeneID:4490778;Name=AHA_1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1071
NC_008570.1	RefSeq	CDS	1163620	1163766	.	-	0	ID=cds1031;Parent=gene1070;Dbxref=Genbank:YP_855613.1,GeneID:4490778;Name=YP_855613.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855613.1;transl_table=11
NC_008570.1	RefSeq	gene	1164200	1165459	.	-	.	ID=gene1071;Dbxref=GeneID:4490779;Name=AHA_1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1072
NC_008570.1	RefSeq	CDS	1164200	1165459	.	-	0	ID=cds1032;Parent=gene1071;Dbxref=Genbank:YP_855614.1,GeneID:4490779;Name=YP_855614.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;product=protein UmuC;protein_id=YP_855614.1;transl_table=11
NC_008570.1	RefSeq	gene	1165440	1165883	.	-	.	ID=gene1072;Dbxref=GeneID:4490780;Name=AHA_1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1073
NC_008570.1	RefSeq	CDS	1165440	1165883	.	-	0	ID=cds1033;Parent=gene1072;Dbxref=Genbank:YP_855615.1,GeneID:4490780;Name=YP_855615.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;product=protein UmuD;protein_id=YP_855615.1;transl_table=11
NC_008570.1	RefSeq	gene	1166357	1168504	.	+	.	ID=gene1073;Dbxref=GeneID:4490781;Name=AHA_1074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1074
NC_008570.1	RefSeq	CDS	1166357	1168504	.	+	0	ID=cds1034;Parent=gene1073;Dbxref=Genbank:YP_855616.1,GeneID:4490781;Name=YP_855616.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855616.1;transl_table=11
NC_008570.1	RefSeq	gene	1168501	1170042	.	+	.	ID=gene1074;Dbxref=GeneID:4487271;Name=AHA_1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1075
NC_008570.1	RefSeq	CDS	1168501	1170042	.	+	0	ID=cds1035;Parent=gene1074;Dbxref=Genbank:YP_855617.1,GeneID:4487271;Name=YP_855617.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855617.1;transl_table=11
NC_008570.1	RefSeq	gene	1169945	1175374	.	+	.	ID=gene1075;Dbxref=GeneID:4487272;Name=AHA_1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1076
NC_008570.1	RefSeq	CDS	1169945	1175374	.	+	0	ID=cds1036;Parent=gene1075;Dbxref=Genbank:YP_855618.1,GeneID:4487272;Name=YP_855618.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855618.1;transl_table=11
NC_008570.1	RefSeq	gene	1175428	1176750	.	-	.	ID=gene1076;Dbxref=GeneID:4487273;Name=AHA_1077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1077
NC_008570.1	RefSeq	CDS	1175428	1176750	.	-	0	ID=cds1037;Parent=gene1076;Dbxref=Genbank:YP_855619.1,GeneID:4487273;Name=YP_855619.1;Note=identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675;gbkey=CDS;product=modification methylase DdeI;protein_id=YP_855619.1;transl_table=11
NC_008570.1	RefSeq	gene	1178163	1180091	.	-	.	ID=gene1077;Dbxref=GeneID:4487274;Name=AHA_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1078
NC_008570.1	RefSeq	CDS	1178163	1180091	.	-	0	ID=cds1038;Parent=gene1077;Dbxref=Genbank:YP_855620.1,GeneID:4487274;Name=YP_855620.1;Note=identified by match to protein family HMM PF03235;gbkey=CDS;product=hypothetical protein;protein_id=YP_855620.1;transl_table=11
NC_008570.1	RefSeq	gene	1180233	1180763	.	-	.	ID=gene1078;Dbxref=GeneID:4487275;Name=AHA_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1079
NC_008570.1	RefSeq	CDS	1180233	1180763	.	-	0	ID=cds1039;Parent=gene1078;Dbxref=Genbank:YP_855621.1,GeneID:4487275;Name=YP_855621.1;Note=identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;product=DNA repair protein RadC;protein_id=YP_855621.1;transl_table=11
NC_008570.1	RefSeq	gene	1181510	1181935	.	-	.	ID=gene1079;Dbxref=GeneID:4487276;Name=AHA_1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1080
NC_008570.1	RefSeq	CDS	1181510	1181935	.	-	0	ID=cds1040;Parent=gene1079;Dbxref=Genbank:YP_855622.1,GeneID:4487276;Name=YP_855622.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855622.1;transl_table=11
NC_008570.1	RefSeq	gene	1181955	1182302	.	-	.	ID=gene1080;Dbxref=GeneID:4487277;Name=AHA_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1081
NC_008570.1	RefSeq	CDS	1181955	1182302	.	-	0	ID=cds1041;Parent=gene1080;Dbxref=Genbank:YP_855623.1,GeneID:4487277;Name=YP_855623.1;Note=identified by match to protein family HMM PF06803;gbkey=CDS;product=hypothetical protein;protein_id=YP_855623.1;transl_table=11
NC_008570.1	RefSeq	gene	1182386	1182835	.	-	.	ID=gene1081;Dbxref=GeneID:4487278;Name=AHA_1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1082
NC_008570.1	RefSeq	CDS	1182386	1182835	.	-	0	ID=cds1042;Parent=gene1081;Dbxref=Genbank:YP_855624.1,GeneID:4487278;Name=YP_855624.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855624.1;transl_table=11
NC_008570.1	RefSeq	gene	1182848	1183171	.	-	.	ID=gene1082;Dbxref=GeneID:4487279;Name=AHA_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1083
NC_008570.1	RefSeq	CDS	1182848	1183171	.	-	0	ID=cds1043;Parent=gene1082;Dbxref=Genbank:YP_855625.1,GeneID:4487279;Name=YP_855625.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855625.1;transl_table=11
NC_008570.1	RefSeq	gene	1183418	1183768	.	+	.	ID=gene1083;Dbxref=GeneID:4487280;Name=AHA_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1084
NC_008570.1	RefSeq	CDS	1183418	1183768	.	+	0	ID=cds1044;Parent=gene1083;Dbxref=Genbank:YP_855626.1,GeneID:4487280;Name=YP_855626.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=helix-turn-helix domain-containing protein;protein_id=YP_855626.1;transl_table=11
NC_008570.1	RefSeq	gene	1183780	1184619	.	-	.	ID=gene1084;Dbxref=GeneID:4487281;Name=AHA_1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1085
NC_008570.1	RefSeq	CDS	1183780	1184619	.	-	0	ID=cds1045;Parent=gene1084;Dbxref=Genbank:YP_855627.1,GeneID:4487281;Name=YP_855627.1;Note=identified by similarity to GB:AAN68106.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855627.1;transl_table=11
NC_008570.1	RefSeq	gene	1184757	1185746	.	-	.	ID=gene1085;Dbxref=GeneID:4487282;Name=AHA_1086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1086
NC_008570.1	RefSeq	CDS	1184757	1185746	.	-	0	ID=cds1046;Parent=gene1085;Dbxref=Genbank:YP_855629.1,GeneID:4487282;Name=YP_855629.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855629.1;transl_table=11
NC_008570.1	RefSeq	gene	1185841	1186791	.	-	.	ID=gene1086;Dbxref=GeneID:4487283;Name=AHA_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1087
NC_008570.1	RefSeq	CDS	1185841	1186791	.	-	0	ID=cds1047;Parent=gene1086;Dbxref=Genbank:YP_855630.1,GeneID:4487283;Name=YP_855630.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855630.1;transl_table=11
NC_008570.1	RefSeq	gene	1187027	1187103	.	-	.	ID=gene1087;Dbxref=GeneID:4487284;Name=AHA_1088;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1088
NC_008570.1	RefSeq	tRNA	1187027	1187103	.	-	.	ID=rna38;Parent=gene1087;Dbxref=GeneID:4487284;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	1187027	1187103	.	-	.	ID=id39;Parent=rna38;Dbxref=GeneID:4487284;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	1187154	1188308	.	-	.	ID=gene1088;Dbxref=GeneID:4487285;Name=AHA_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1089
NC_008570.1	RefSeq	CDS	1187154	1188308	.	-	0	ID=cds1048;Parent=gene1088;Dbxref=Genbank:YP_855631.1,GeneID:4487285;Name=YP_855631.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855631.1;transl_table=11
NC_008570.1	RefSeq	gene	1188389	1189123	.	+	.	ID=gene1089;Dbxref=GeneID:4487286;Name=AHA_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1090
NC_008570.1	RefSeq	CDS	1188389	1189123	.	+	0	ID=cds1049;Parent=gene1089;Dbxref=Genbank:YP_855632.1,GeneID:4487286;Name=YP_855632.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855632.1;transl_table=11
NC_008570.1	RefSeq	gene	1189139	1189570	.	+	.	ID=gene1090;Dbxref=GeneID:4487287;Name=AHA_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1091
NC_008570.1	RefSeq	CDS	1189139	1189570	.	+	0	ID=cds1050;Parent=gene1090;Dbxref=Genbank:YP_855633.1,GeneID:4487287;Name=YP_855633.1;Note=identified by match to protein family HMM PF04164;gbkey=CDS;product=hypothetical protein;protein_id=YP_855633.1;transl_table=11
NC_008570.1	RefSeq	gene	1189671	1190843	.	-	.	ID=gene1091;Dbxref=GeneID:4487288;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AHA_1092
NC_008570.1	RefSeq	CDS	1189671	1190843	.	-	0	ID=cds1051;Parent=gene1091;Dbxref=Genbank:YP_855634.1,GeneID:4487288;Name=YP_855634.1;Note=identified by match to protein family HMM PF00800%3B match to protein family HMM PF01817%3B match to protein family HMM TIGR01797;gbkey=CDS;gene=pheA;product=chorismate mutase/prephenate dehydratase;protein_id=YP_855634.1;transl_table=11
NC_008570.1	RefSeq	gene	1191186	1191785	.	+	.	ID=gene1092;Dbxref=GeneID:4490048;Name=AHA_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1094
NC_008570.1	RefSeq	CDS	1191186	1191785	.	+	0	ID=cds1052;Parent=gene1092;Dbxref=Genbank:YP_855636.1,GeneID:4490048;Name=YP_855636.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=hydrolase;protein_id=YP_855636.1;transl_table=11
NC_008570.1	RefSeq	gene	1191811	1192089	.	+	.	ID=gene1093;Dbxref=GeneID:4490049;Name=AHA_1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1095
NC_008570.1	RefSeq	CDS	1191811	1192089	.	+	0	ID=cds1053;Parent=gene1093;Dbxref=Genbank:YP_855637.1,GeneID:4490049;Name=YP_855637.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855637.1;transl_table=11
NC_008570.1	RefSeq	gene	1192135	1193007	.	+	.	ID=gene1094;Dbxref=GeneID:4490050;Name=AHA_1096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1096
NC_008570.1	RefSeq	CDS	1192135	1193007	.	+	0	ID=cds1054;Parent=gene1094;Dbxref=Genbank:YP_855638.1,GeneID:4490050;Name=YP_855638.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855638.1;transl_table=11
NC_008570.1	RefSeq	gene	1193103	1193651	.	+	.	ID=gene1095;Dbxref=GeneID:4490051;Name=AHA_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1097
NC_008570.1	RefSeq	CDS	1193103	1193651	.	+	0	ID=cds1055;Parent=gene1095;Dbxref=Genbank:YP_855639.1,GeneID:4490051;Name=YP_855639.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855639.1;transl_table=11
NC_008570.1	RefSeq	gene	1193836	1194465	.	+	.	ID=gene1096;Dbxref=GeneID:4490052;Name=AHA_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1098
NC_008570.1	RefSeq	CDS	1193836	1194465	.	+	0	ID=cds1056;Parent=gene1096;Dbxref=Genbank:YP_855640.1,GeneID:4490052;Name=YP_855640.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855640.1;transl_table=11
NC_008570.1	RefSeq	gene	1194638	1195582	.	+	.	ID=gene1097;Dbxref=GeneID:4490053;Name=AHA_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1099
NC_008570.1	RefSeq	CDS	1194638	1195582	.	+	0	ID=cds1057;Parent=gene1097;Dbxref=Genbank:YP_855641.1,GeneID:4490053;Name=YP_855641.1;Note=identified by match to protein family HMM PF04463;gbkey=CDS;product=hypothetical protein;protein_id=YP_855641.1;transl_table=11
NC_008570.1	RefSeq	gene	1195646	1196533	.	+	.	ID=gene1098;Dbxref=GeneID:4490054;Name=AHA_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1100
NC_008570.1	RefSeq	CDS	1195646	1196533	.	+	0	ID=cds1058;Parent=gene1098;Dbxref=Genbank:YP_855642.1,GeneID:4490054;Name=YP_855642.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=YP_855642.1;transl_table=11
NC_008570.1	RefSeq	gene	1196530	1197951	.	+	.	ID=gene1099;Dbxref=GeneID:4490055;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AHA_1101
NC_008570.1	RefSeq	CDS	1196530	1197951	.	+	0	ID=cds1059;Parent=gene1099;Dbxref=Genbank:YP_855643.1,GeneID:4490055;Name=YP_855643.1;Note=identified by match to protein family HMM PF00875%3B match to protein family HMM PF03441;gbkey=CDS;gene=phrB;product=deoxyribodipyrimidine photolyase;protein_id=YP_855643.1;transl_table=11
NC_008570.1	RefSeq	gene	1197953	1198381	.	+	.	ID=gene1100;Dbxref=GeneID:4490056;Name=AHA_1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1102
NC_008570.1	RefSeq	CDS	1197953	1198381	.	+	0	ID=cds1060;Parent=gene1100;Dbxref=Genbank:YP_855644.1,GeneID:4490056;Name=YP_855644.1;Note=identified by match to protein family HMM PF07366;gbkey=CDS;product=transcriptional regulator;protein_id=YP_855644.1;transl_table=11
NC_008570.1	RefSeq	gene	1198378	1199115	.	+	.	ID=gene1101;Dbxref=GeneID:4490057;Name=AHA_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1103
NC_008570.1	RefSeq	CDS	1198378	1199115	.	+	0	ID=cds1061;Parent=gene1101;Dbxref=Genbank:YP_855645.1,GeneID:4490057;Name=YP_855645.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=YP_855645.1;transl_table=11
NC_008570.1	RefSeq	gene	1199112	1200371	.	+	.	ID=gene1102;Dbxref=GeneID:4490058;Name=AHA_1104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1104
NC_008570.1	RefSeq	CDS	1199112	1200371	.	+	0	ID=cds1062;Parent=gene1102;Dbxref=Genbank:YP_855646.1,GeneID:4490058;Name=YP_855646.1;Note=identified by match to protein family HMM PF01593;gbkey=CDS;product=amino-oxidase;protein_id=YP_855646.1;transl_table=11
NC_008570.1	RefSeq	gene	1200368	1201150	.	+	.	ID=gene1103;Dbxref=GeneID:4490059;Name=AHA_1105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1105
NC_008570.1	RefSeq	CDS	1200368	1201150	.	+	0	ID=cds1063;Parent=gene1103;Dbxref=Genbank:YP_855647.1,GeneID:4490059;Name=YP_855647.1;Note=identified by match to protein family HMM PF07103;gbkey=CDS;product=plasmid partition ParA protein;protein_id=YP_855647.1;transl_table=11
NC_008570.1	RefSeq	gene	1201150	1202406	.	+	.	ID=gene1104;Dbxref=GeneID:4490060;Name=AHA_1106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1106
NC_008570.1	RefSeq	CDS	1201150	1202406	.	+	0	ID=cds1064;Parent=gene1104;Dbxref=Genbank:YP_855648.1,GeneID:4490060;Name=YP_855648.1;Note=identified by match to protein family HMM PF02353;gbkey=CDS;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=YP_855648.1;transl_table=11
NC_008570.1	RefSeq	gene	1202885	1203103	.	+	.	ID=gene1105;Dbxref=GeneID:4490061;Name=AHA_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1107
NC_008570.1	RefSeq	CDS	1202885	1203103	.	+	0	ID=cds1065;Parent=gene1105;Dbxref=Genbank:YP_855649.1,GeneID:4490061;Name=YP_855649.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855649.1;transl_table=11
NC_008570.1	RefSeq	gene	1203120	1203611	.	+	.	ID=gene1106;Dbxref=GeneID:4490062;Name=AHA_1108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1108
NC_008570.1	RefSeq	CDS	1203120	1203611	.	+	0	ID=cds1066;Parent=gene1106;Dbxref=Genbank:YP_855650.1,GeneID:4490062;Name=YP_855650.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855650.1;transl_table=11
NC_008570.1	RefSeq	gene	1203611	1204168	.	+	.	ID=gene1107;Dbxref=GeneID:4490063;Name=AHA_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1109
NC_008570.1	RefSeq	CDS	1203611	1204168	.	+	0	ID=cds1067;Parent=gene1107;Dbxref=Genbank:YP_855651.1,GeneID:4490063;Name=YP_855651.1;gbkey=CDS;product=lipoprotein;protein_id=YP_855651.1;transl_table=11
NC_008570.1	RefSeq	gene	1204293	1204760	.	+	.	ID=gene1108;Dbxref=GeneID:4490064;Name=AHA_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1110
NC_008570.1	RefSeq	CDS	1204293	1204760	.	+	0	ID=cds1068;Parent=gene1108;Dbxref=Genbank:YP_855652.1,GeneID:4490064;Name=YP_855652.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;product=DPS family protein;protein_id=YP_855652.1;transl_table=11
NC_008570.1	RefSeq	gene	1205088	1206737	.	+	.	ID=gene1109;Dbxref=GeneID:4490065;Name=AHA_1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1111
NC_008570.1	RefSeq	CDS	1205088	1206737	.	+	0	ID=cds1069;Parent=gene1109;Dbxref=Genbank:YP_855653.1,GeneID:4490065;Name=YP_855653.1;Note=catalyzes the reduction of hydroxylamine to ammonia and water;gbkey=CDS;product=hydroxylamine reductase;protein_id=YP_855653.1;transl_table=11
NC_008570.1	RefSeq	gene	1206852	1207871	.	+	.	ID=gene1110;Dbxref=GeneID:4490066;Name=AHA_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1112
NC_008570.1	RefSeq	CDS	1206852	1207871	.	+	0	ID=cds1070;Parent=gene1110;Dbxref=Genbank:YP_855654.1,GeneID:4490066;Name=YP_855654.1;Note=identified by match to protein family HMM PF00111%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_855654.1;transl_table=11
NC_008570.1	RefSeq	gene	1207957	1208982	.	+	.	ID=gene1111;Dbxref=GeneID:4490067;Name=galE-1;gbkey=Gene;gene=galE-1;gene_biotype=protein_coding;locus_tag=AHA_1113
NC_008570.1	RefSeq	CDS	1207957	1208982	.	+	0	ID=cds1071;Parent=gene1111;Dbxref=Genbank:YP_855655.1,GeneID:4490067;Name=YP_855655.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF05368%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE-1;product=UDP-glucose 4-epimerase;protein_id=YP_855655.1;transl_table=11
NC_008570.1	RefSeq	gene	1209157	1209906	.	-	.	ID=gene1112;Dbxref=GeneID:4490743;Name=AHA_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1114
NC_008570.1	RefSeq	CDS	1209157	1209906	.	-	0	ID=cds1072;Parent=gene1112;Dbxref=Genbank:YP_855656.1,GeneID:4490743;Name=YP_855656.1;Note=identified by match to protein family HMM PF01323;gbkey=CDS;product=outer membrane protein;protein_id=YP_855656.1;transl_table=11
NC_008570.1	RefSeq	gene	1209933	1210028	.	+	.	ID=gene1113;Dbxref=GeneID:4490744;Name=AHA_1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1115
NC_008570.1	RefSeq	CDS	1209933	1210028	.	+	0	ID=cds1073;Parent=gene1113;Dbxref=Genbank:YP_855657.1,GeneID:4490744;Name=YP_855657.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855657.1;transl_table=11
NC_008570.1	RefSeq	gene	1210105	1210192	.	+	.	ID=gene1114;Dbxref=GeneID:4490745;Name=AHA_1116;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1116
NC_008570.1	RefSeq	tRNA	1210105	1210192	.	+	.	ID=rna39;Parent=gene1114;Dbxref=GeneID:4490745;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	1210105	1210192	.	+	.	ID=id40;Parent=rna39;Dbxref=GeneID:4490745;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	1210730	1211524	.	+	.	ID=gene1115;Dbxref=GeneID:4490746;Name=AHA_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1117
NC_008570.1	RefSeq	CDS	1210730	1211524	.	+	0	ID=cds1074;Parent=gene1115;Dbxref=Genbank:YP_855658.1,GeneID:4490746;Name=YP_855658.1;Note=identified by match to protein family HMM PF00196%3B match to protein family HMM PF03472%3B match to protein family HMM PF04967;gbkey=CDS;product=transcriptional activator protein AhyR/asaR;protein_id=YP_855658.1;transl_table=11
NC_008570.1	RefSeq	gene	1211755	1212273	.	+	.	ID=gene1116;Dbxref=GeneID:4490747;Name=AHA_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1118
NC_008570.1	RefSeq	CDS	1211755	1212273	.	+	0	ID=cds1075;Parent=gene1116;Dbxref=Genbank:YP_855659.1,GeneID:4490747;Name=YP_855659.1;Note=identified by match to protein family HMM PF05638;gbkey=CDS;product=HcpA-like protein;protein_id=YP_855659.1;transl_table=11
NC_008570.1	RefSeq	gene	1212752	1215535	.	+	.	ID=gene1117;Dbxref=GeneID:4490748;Name=AHA_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1119
NC_008570.1	RefSeq	CDS	1212752	1215535	.	+	0	ID=cds1076;Parent=gene1117;Dbxref=Genbank:YP_855660.1,GeneID:4490748;Name=YP_855660.1;Note=identified by match to protein family HMM PF04524%3B match to protein family HMM TIGR01646;gbkey=CDS;product=Rhs element Vgr protein;protein_id=YP_855660.1;transl_table=11
NC_008570.1	RefSeq	gene	1215532	1216332	.	+	.	ID=gene1118;Dbxref=GeneID:4490749;Name=AHA_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1120
NC_008570.1	RefSeq	CDS	1215532	1216332	.	+	0	ID=cds1077;Parent=gene1118;Dbxref=Genbank:YP_855661.1,GeneID:4490749;Name=YP_855661.1;gbkey=CDS;product=type III secretion protein;protein_id=YP_855661.1;transl_table=11
NC_008570.1	RefSeq	gene	1216332	1218284	.	+	.	ID=gene1119;Dbxref=GeneID:4490750;Name=AHA_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1121
NC_008570.1	RefSeq	CDS	1216332	1218284	.	+	0	ID=cds1078;Parent=gene1119;Dbxref=Genbank:YP_855662.1,GeneID:4490750;Name=YP_855662.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855662.1;transl_table=11
NC_008570.1	RefSeq	gene	1218284	1218982	.	+	.	ID=gene1120;Dbxref=GeneID:4490751;Name=AHA_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1122
NC_008570.1	RefSeq	CDS	1218284	1218982	.	+	0	ID=cds1079;Parent=gene1120;Dbxref=Genbank:YP_855663.1,GeneID:4490751;Name=YP_855663.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855663.1;transl_table=11
NC_008570.1	RefSeq	gene	1219157	1219858	.	+	.	ID=gene1121;Dbxref=GeneID:4490752;Name=AHA_1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1123
NC_008570.1	RefSeq	CDS	1219157	1219858	.	+	0	ID=cds1080;Parent=gene1121;Dbxref=Genbank:YP_855664.1,GeneID:4490752;Name=YP_855664.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855664.1;transl_table=11
NC_008570.1	RefSeq	gene	1219986	1220870	.	-	.	ID=gene1122;Dbxref=GeneID:4490753;Name=AHA_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1124
NC_008570.1	RefSeq	CDS	1219986	1220870	.	-	0	ID=cds1081;Parent=gene1122;Dbxref=Genbank:YP_855665.1,GeneID:4490753;Name=YP_855665.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855665.1;transl_table=11
NC_008570.1	RefSeq	gene	1220980	1221759	.	+	.	ID=gene1123;Dbxref=GeneID:4490754;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=AHA_1125
NC_008570.1	RefSeq	CDS	1220980	1221759	.	+	0	ID=cds1082;Parent=gene1123;Dbxref=Genbank:YP_855666.1,GeneID:4490754;Name=YP_855666.1;Note=identified by match to protein family HMM PF03306%3B match to protein family HMM TIGR01252;gbkey=CDS;gene=budA;product=alpha-acetolactate decarboxylase;protein_id=YP_855666.1;transl_table=11
NC_008570.1	RefSeq	gene	1221787	1223457	.	+	.	ID=gene1124;Dbxref=GeneID:4490755;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=AHA_1126
NC_008570.1	RefSeq	CDS	1221787	1223457	.	+	0	ID=cds1083;Parent=gene1124;Dbxref=Genbank:YP_855667.1,GeneID:4490755;Name=YP_855667.1;Note=catalyzes the formation of 2-acetolactate from pyruvate in stationary phase;gbkey=CDS;gene=alsS;product=acetolactate synthase;protein_id=YP_855667.1;transl_table=11
NC_008570.1	RefSeq	gene	1223551	1224129	.	-	.	ID=gene1125;Dbxref=GeneID:4490756;Name=AHA_1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1127
NC_008570.1	RefSeq	CDS	1223551	1224129	.	-	0	ID=cds1084;Parent=gene1125;Dbxref=Genbank:YP_855668.1,GeneID:4490756;Name=YP_855668.1;Note=identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383;gbkey=CDS;product=4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein;protein_id=YP_855668.1;transl_table=11
NC_008570.1	RefSeq	gene	1224163	1225110	.	-	.	ID=gene1126;Dbxref=GeneID:4490757;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AHA_1128
NC_008570.1	RefSeq	CDS	1224163	1225110	.	-	0	ID=cds1085;Parent=gene1126;Dbxref=Genbank:YP_855669.1,GeneID:4490757;Name=YP_855669.1;Note=identified by match to protein family HMM PF02558%3B match to protein family HMM TIGR00745;gbkey=CDS;gene=panE;product=2-dehydropantoate 2-reductase;protein_id=YP_855669.1;transl_table=11
NC_008570.1	RefSeq	gene	1225468	1225950	.	+	.	ID=gene1127;Dbxref=GeneID:4490758;Name=AHA_1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1129
NC_008570.1	RefSeq	CDS	1225468	1225950	.	+	0	ID=cds1086;Parent=gene1127;Dbxref=Genbank:YP_855670.1,GeneID:4490758;Name=YP_855670.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=YP_855670.1;transl_table=11
NC_008570.1	RefSeq	gene	1226053	1226895	.	-	.	ID=gene1128;Dbxref=GeneID:4490759;Name=AHA_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1130
NC_008570.1	RefSeq	CDS	1226053	1226895	.	-	0	ID=cds1087;Parent=gene1128;Dbxref=Genbank:YP_855671.1,GeneID:4490759;Name=YP_855671.1;Note=identified by match to protein family HMM PF03502;gbkey=CDS;product=outer membrane protein;protein_id=YP_855671.1;transl_table=11
NC_008570.1	RefSeq	gene	1227052	1228431	.	-	.	ID=gene1129;Dbxref=GeneID:4490760;Name=AHA_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1131
NC_008570.1	RefSeq	CDS	1227052	1228431	.	-	0	ID=cds1088;Parent=gene1129;Dbxref=Genbank:YP_855672.1,GeneID:4490760;Name=YP_855672.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=muropeptide permease AmpG;protein_id=YP_855672.1;transl_table=11
NC_008570.1	RefSeq	gene	1228962	1229513	.	-	.	ID=gene1130;Dbxref=GeneID:4490761;Name=AHA_1132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1132
NC_008570.1	RefSeq	CDS	1228962	1229513	.	-	0	ID=cds1089;Parent=gene1130;Dbxref=Genbank:YP_855673.1,GeneID:4490761;Name=YP_855673.1;Note=identified by match to protein family HMM PF00160;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase B;protein_id=YP_855673.1;transl_table=11
NC_008570.1	RefSeq	gene	1229529	1230101	.	-	.	ID=gene1131;Dbxref=GeneID:4489931;Name=AHA_1133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1133
NC_008570.1	RefSeq	CDS	1229529	1230101	.	-	0	ID=cds1090;Parent=gene1131;Dbxref=Genbank:YP_855674.1,GeneID:4489931;Name=YP_855674.1;Note=identified by match to protein family HMM PF03923;gbkey=CDS;product=hypothetical protein;protein_id=YP_855674.1;transl_table=11
NC_008570.1	RefSeq	gene	1230126	1231268	.	-	.	ID=gene1132;Dbxref=GeneID:4489932;Name=AHA_1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1134
NC_008570.1	RefSeq	CDS	1230126	1231268	.	-	0	ID=cds1091;Parent=gene1132;Dbxref=Genbank:YP_855675.1,GeneID:4489932;Name=YP_855675.1;Note=identified by match to protein family HMM PF05175;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase D;protein_id=YP_855675.1;transl_table=11
NC_008570.1	RefSeq	gene	1231475	1231783	.	+	.	ID=gene1133;Dbxref=GeneID:4489933;Name=AHA_1135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1135
NC_008570.1	RefSeq	CDS	1231475	1231783	.	+	0	ID=cds1092;Parent=gene1133;Dbxref=Genbank:YP_855676.1,GeneID:4489933;Name=YP_855676.1;Note=identified by match to protein family HMM PF01722;gbkey=CDS;product=BolA protein;protein_id=YP_855676.1;transl_table=11
NC_008570.1	RefSeq	gene	1232225	1233568	.	+	.	ID=gene1134;Dbxref=GeneID:4489934;Name=nqrA;gbkey=Gene;gene=nqrA;gene_biotype=protein_coding;locus_tag=AHA_1136
NC_008570.1	RefSeq	CDS	1232225	1233568	.	+	0	ID=cds1093;Parent=gene1134;Dbxref=Genbank:YP_855677.1,GeneID:4489934;Name=YP_855677.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;gene=nqrA;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=YP_855677.1;transl_table=11
NC_008570.1	RefSeq	gene	1233572	1234801	.	+	.	ID=gene1135;Dbxref=GeneID:4489935;Name=nqrB;gbkey=Gene;gene=nqrB;gene_biotype=protein_coding;locus_tag=AHA_1137
NC_008570.1	RefSeq	CDS	1233572	1234801	.	+	0	ID=cds1094;Parent=gene1135;Dbxref=Genbank:YP_855678.1,GeneID:4489935;Name=YP_855678.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;gene=nqrB;product=Na(+)-translocating NADH-quinone reductase subunit B;protein_id=YP_855678.1;transl_table=11
NC_008570.1	RefSeq	gene	1234791	1235579	.	+	.	ID=gene1136;Dbxref=GeneID:4489936;Name=nqrC;gbkey=Gene;gene=nqrC;gene_biotype=protein_coding;locus_tag=AHA_1138
NC_008570.1	RefSeq	CDS	1234791	1235579	.	+	0	ID=cds1095;Parent=gene1136;Dbxref=Genbank:YP_855679.1,GeneID:4489936;Name=YP_855679.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;gene=nqrC;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=YP_855679.1;transl_table=11
NC_008570.1	RefSeq	gene	1235572	1236204	.	+	.	ID=gene1137;Dbxref=GeneID:4489937;Name=nqrD;gbkey=Gene;gene=nqrD;gene_biotype=protein_coding;locus_tag=AHA_1139
NC_008570.1	RefSeq	CDS	1235572	1236204	.	+	0	ID=cds1096;Parent=gene1137;Dbxref=Genbank:YP_855680.1,GeneID:4489937;Name=YP_855680.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01939;gbkey=CDS;gene=nqrD;product=NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit;protein_id=YP_855680.1;transl_table=11
NC_008570.1	RefSeq	gene	1236208	1236804	.	+	.	ID=gene1138;Dbxref=GeneID:4489938;Name=nqrE-1;gbkey=Gene;gene=nqrE-1;gene_biotype=protein_coding;locus_tag=AHA_1140
NC_008570.1	RefSeq	CDS	1236208	1236804	.	+	0	ID=cds1097;Parent=gene1138;Dbxref=Genbank:YP_855681.1,GeneID:4489938;Name=YP_855681.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;gene=nqrE-1;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=YP_855681.1;transl_table=11
NC_008570.1	RefSeq	gene	1236822	1238045	.	+	.	ID=gene1139;Dbxref=GeneID:4489939;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=AHA_1141
NC_008570.1	RefSeq	CDS	1236822	1238045	.	+	0	ID=cds1098;Parent=gene1139;Dbxref=Genbank:YP_855682.1,GeneID:4489939;Name=YP_855682.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;gene=nqrF;product=Na(+)-translocating NADH-quinone reductase subunit F;protein_id=YP_855682.1;transl_table=11
NC_008570.1	RefSeq	gene	1238049	1239089	.	+	.	ID=gene1140;Dbxref=GeneID:4489940;Name=AHA_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1142
NC_008570.1	RefSeq	CDS	1238049	1239089	.	+	0	ID=cds1099;Parent=gene1140;Dbxref=Genbank:YP_855683.1,GeneID:4489940;Name=YP_855683.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=YP_855683.1;transl_table=11
NC_008570.1	RefSeq	gene	1239101	1239325	.	+	.	ID=gene1141;Dbxref=GeneID:4489941;Name=AHA_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1143
NC_008570.1	RefSeq	CDS	1239101	1239325	.	+	0	ID=cds1100;Parent=gene1141;Dbxref=Genbank:YP_855684.1,GeneID:4489941;Name=YP_855684.1;Note=identified by match to protein family HMM PF04400;gbkey=CDS;product=hypothetical protein;protein_id=YP_855684.1;transl_table=11
NC_008570.1	RefSeq	gene	1239413	1239625	.	-	.	ID=gene1142;Dbxref=GeneID:4489942;Name=AHA_1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1144
NC_008570.1	RefSeq	CDS	1239413	1239625	.	-	0	ID=cds1101;Parent=gene1142;Dbxref=Genbank:YP_855685.1,GeneID:4489942;Name=YP_855685.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855685.1;transl_table=11
NC_008570.1	RefSeq	gene	1239758	1240810	.	+	.	ID=gene1143;Dbxref=GeneID:4489943;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AHA_1145
NC_008570.1	RefSeq	CDS	1239758	1240810	.	+	0	ID=cds1102;Parent=gene1143;Dbxref=Genbank:YP_855686.1,GeneID:4489943;Name=YP_855686.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;gene=dinB;product=DNA polymerase IV;protein_id=YP_855686.1;transl_table=11
NC_008570.1	RefSeq	gene	1240879	1243020	.	+	.	ID=gene1144;Dbxref=GeneID:4489944;Name=AHA_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1146
NC_008570.1	RefSeq	CDS	1240879	1243020	.	+	0	ID=cds1103;Parent=gene1144;Dbxref=Genbank:YP_855687.1,GeneID:4489944;Name=YP_855687.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_855687.1;transl_table=11
NC_008570.1	RefSeq	gene	1243304	1244224	.	+	.	ID=gene1145;Dbxref=GeneID:4489945;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AHA_1147
NC_008570.1	RefSeq	CDS	1243304	1244224	.	+	0	ID=cds1104;Parent=gene1145;Dbxref=Genbank:YP_855688.1,GeneID:4489945;Name=YP_855688.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;gene=gcvA;product=DNA-binding transcriptional activator GcvA;protein_id=YP_855688.1;transl_table=11
NC_008570.1	RefSeq	gene	1244217	1244855	.	+	.	ID=gene1146;Dbxref=GeneID:4489946;Name=AHA_1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1148
NC_008570.1	RefSeq	CDS	1244217	1244855	.	+	0	ID=cds1105;Parent=gene1146;Dbxref=Genbank:YP_855689.1,GeneID:4489946;Name=YP_855689.1;gbkey=CDS;product=esterase/lipase/thioesterase family protein;protein_id=YP_855689.1;transl_table=11
NC_008570.1	RefSeq	gene	1244888	1245274	.	+	.	ID=gene1147;Dbxref=GeneID:4489947;Name=AHA_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1149
NC_008570.1	RefSeq	CDS	1244888	1245274	.	+	0	ID=cds1106;Parent=gene1147;Dbxref=Genbank:YP_855690.1,GeneID:4489947;Name=YP_855690.1;Note=identified by match to protein family HMM PF04241;gbkey=CDS;product=hypothetical protein;protein_id=YP_855690.1;transl_table=11
NC_008570.1	RefSeq	gene	1245267	1246361	.	+	.	ID=gene1148;Dbxref=GeneID:4489948;Name=AHA_1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1150
NC_008570.1	RefSeq	CDS	1245267	1246361	.	+	0	ID=cds1107;Parent=gene1148;Dbxref=Genbank:YP_855691.1,GeneID:4489948;Name=YP_855691.1;gbkey=CDS;product=RNA 2'-O-ribose methyltransferase;protein_id=YP_855691.1;transl_table=11
NC_008570.1	RefSeq	gene	1246432	1246872	.	-	.	ID=gene1149;Dbxref=GeneID:4489949;Name=AHA_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1151
NC_008570.1	RefSeq	CDS	1246432	1246872	.	-	0	ID=cds1108;Parent=gene1149;Dbxref=Genbank:YP_855692.1,GeneID:4489949;Name=YP_855692.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855692.1;transl_table=11
NC_008570.1	RefSeq	gene	1246993	1248000	.	-	.	ID=gene1150;Dbxref=GeneID:4489950;Name=AHA_1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1152
NC_008570.1	RefSeq	CDS	1246993	1248000	.	-	0	ID=cds1109;Parent=gene1150;Dbxref=Genbank:YP_855693.1,GeneID:4489950;Name=YP_855693.1;Note=catalyzes the formation of 2-oxoglutarate from isocitrate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=YP_855693.1;transl_table=11
NC_008570.1	RefSeq	gene	1248147	1249052	.	-	.	ID=gene1151;Dbxref=GeneID:4488776;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AHA_1153
NC_008570.1	RefSeq	CDS	1248147	1249052	.	-	0	ID=cds1110;Parent=gene1151;Dbxref=Genbank:YP_855694.1,GeneID:4488776;Name=YP_855694.1;Note=identified by match to protein family HMM PF01367%3B match to protein family HMM PF02739;gbkey=CDS;gene=xni;product=exodeoxyribonuclease IX;protein_id=YP_855694.1;transl_table=11
NC_008570.1	RefSeq	gene	1249081	1250436	.	-	.	ID=gene1152;Dbxref=GeneID:4488777;Name=AHA_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1154
NC_008570.1	RefSeq	CDS	1249081	1250436	.	-	0	ID=cds1111;Parent=gene1152;Dbxref=Genbank:YP_855695.1,GeneID:4488777;Name=YP_855695.1;Note=identified by match to protein family HMM PF03641;gbkey=CDS;product=lysine decarboxylase family protein;protein_id=YP_855695.1;transl_table=11
NC_008570.1	RefSeq	gene	1250587	1252206	.	-	.	ID=gene1153;Dbxref=GeneID:4488778;Name=AHA_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1155
NC_008570.1	RefSeq	CDS	1250587	1252206	.	-	0	ID=cds1112;Parent=gene1153;Dbxref=Genbank:YP_855696.1,GeneID:4488778;Name=YP_855696.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_855696.1;transl_table=11
NC_008570.1	RefSeq	gene	1252297	1254567	.	-	.	ID=gene1154;Dbxref=GeneID:4488779;Name=AHA_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1156
NC_008570.1	RefSeq	CDS	1252297	1254567	.	-	0	ID=cds1113;Parent=gene1154;Dbxref=Genbank:YP_855697.1,GeneID:4488779;Name=YP_855697.1;Note=identified by match to protein family HMM PF00515;gbkey=CDS;product=hypothetical protein;protein_id=YP_855697.1;transl_table=11
NC_008570.1	RefSeq	gene	1254702	1255610	.	-	.	ID=gene1155;Dbxref=GeneID:4489581;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AHA_1157
NC_008570.1	RefSeq	CDS	1254702	1255610	.	-	0	ID=cds1114;Parent=gene1155;Dbxref=Genbank:YP_855698.1,GeneID:4489581;Name=YP_855698.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=7-cyano-7-deazaguanine reductase;protein_id=YP_855698.1;transl_table=11
NC_008570.1	RefSeq	gene	1255708	1256256	.	+	.	ID=gene1156;Dbxref=GeneID:4489582;Name=AHA_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1158
NC_008570.1	RefSeq	CDS	1255708	1256256	.	+	0	ID=cds1115;Parent=gene1156;Dbxref=Genbank:YP_855699.1,GeneID:4489582;Name=YP_855699.1;Note=identified by match to protein family HMM PF07348;gbkey=CDS;product=Syd protein;protein_id=YP_855699.1;transl_table=11
NC_008570.1	RefSeq	gene	1256326	1257111	.	-	.	ID=gene1157;Dbxref=GeneID:4489583;Name=AHA_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1159
NC_008570.1	RefSeq	CDS	1256326	1257111	.	-	0	ID=cds1116;Parent=gene1157;Dbxref=Genbank:YP_855700.1,GeneID:4489583;Name=YP_855700.1;gbkey=CDS;product=Zn-ribbon-containing protein;protein_id=YP_855700.1;transl_table=11
NC_008570.1	RefSeq	gene	1257500	1257736	.	-	.	ID=gene1158;Dbxref=GeneID:4489584;Name=AHA_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1160
NC_008570.1	RefSeq	CDS	1257500	1257736	.	-	0	ID=cds1117;Parent=gene1158;Dbxref=Genbank:YP_855701.1,GeneID:4489584;Name=YP_855701.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855701.1;transl_table=11
NC_008570.1	RefSeq	gene	1257794	1258093	.	-	.	ID=gene1159;Dbxref=GeneID:4489585;Name=AHA_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1161
NC_008570.1	RefSeq	CDS	1257794	1258093	.	-	0	ID=cds1118;Parent=gene1159;Dbxref=Genbank:YP_855702.1,GeneID:4489585;Name=YP_855702.1;Note=identified by similarity to GB:AAW85105.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855702.1;transl_table=11
NC_008570.1	RefSeq	gene	1258163	1259191	.	-	.	ID=gene1160;Dbxref=GeneID:4489586;Name=AHA_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1162
NC_008570.1	RefSeq	CDS	1258163	1259191	.	-	0	ID=cds1119;Parent=gene1160;Dbxref=Genbank:YP_855703.1,GeneID:4489586;Name=YP_855703.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855703.1;transl_table=11
NC_008570.1	RefSeq	gene	1259455	1259790	.	+	.	ID=gene1161;Dbxref=GeneID:4489587;Name=AHA_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1163
NC_008570.1	RefSeq	CDS	1259455	1259790	.	+	0	ID=cds1120;Parent=gene1161;Dbxref=Genbank:YP_855704.1,GeneID:4489587;Name=YP_855704.1;Note=identified by match to protein family HMM PF04287;gbkey=CDS;product=hypothetical protein;protein_id=YP_855704.1;transl_table=11
NC_008570.1	RefSeq	gene	1259787	1260560	.	+	.	ID=gene1162;Dbxref=GeneID:4489588;Name=AHA_1164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1164
NC_008570.1	RefSeq	CDS	1259787	1260560	.	+	0	ID=cds1121;Parent=gene1162;Dbxref=Genbank:YP_855705.1,GeneID:4489588;Name=YP_855705.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=RNA pseudouridine synthase family protein;protein_id=YP_855705.1;transl_table=11
NC_008570.1	RefSeq	gene	1260637	1261077	.	+	.	ID=gene1163;Dbxref=GeneID:4489589;Name=AHA_1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1165
NC_008570.1	RefSeq	CDS	1260637	1261077	.	+	0	ID=cds1122;Parent=gene1163;Dbxref=Genbank:YP_855706.1,GeneID:4489589;Name=YP_855706.1;Note=identified by match to protein family HMM PF00258;gbkey=CDS;product=protein MioC;protein_id=YP_855706.1;transl_table=11
NC_008570.1	RefSeq	gene	1261489	1262922	.	+	.	ID=gene1164;Dbxref=GeneID:4489590;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AHA_1166
NC_008570.1	RefSeq	CDS	1261489	1262922	.	+	0	ID=cds1123;Parent=gene1164;Dbxref=Genbank:YP_855707.1,GeneID:4489590;Name=YP_855707.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=YP_855707.1;transl_table=11
NC_008570.1	RefSeq	gene	1262999	1263985	.	+	.	ID=gene1165;Dbxref=GeneID:4489591;Name=AHA_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1167
NC_008570.1	RefSeq	CDS	1262999	1263985	.	+	0	ID=cds1124;Parent=gene1165;Dbxref=Genbank:YP_855708.1,GeneID:4489591;Name=YP_855708.1;Note=identified by match to protein family HMM PF07148;gbkey=CDS;product=maltose operon periplasmic protein;protein_id=YP_855708.1;transl_table=11
NC_008570.1	RefSeq	gene	1264417	1265847	.	+	.	ID=gene1166;Dbxref=GeneID:4489592;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AHA_1168
NC_008570.1	RefSeq	CDS	1264417	1265847	.	+	0	ID=cds1125;Parent=gene1166;Dbxref=Genbank:YP_855709.1,GeneID:4489592;Name=YP_855709.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=ptsG;product=PTS system glucose-specific transporter subunit IIBC;protein_id=YP_855709.1;transl_table=11
NC_008570.1	RefSeq	gene	1266028	1266411	.	-	.	ID=gene1167;Dbxref=GeneID:4489593;Name=AHA_1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1169
NC_008570.1	RefSeq	CDS	1266028	1266411	.	-	0	ID=cds1126;Parent=gene1167;Dbxref=Genbank:YP_855710.1,GeneID:4489593;Name=YP_855710.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855710.1;transl_table=11
NC_008570.1	RefSeq	gene	1266540	1267367	.	-	.	ID=gene1168;Dbxref=GeneID:4489594;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AHA_1170
NC_008570.1	RefSeq	CDS	1266540	1267367	.	-	0	ID=cds1127;Parent=gene1168;Dbxref=Genbank:YP_855711.1,GeneID:4489594;Name=YP_855711.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=YP_855711.1;transl_table=11
NC_008570.1	RefSeq	gene	1267534	1270188	.	-	.	ID=gene1169;Dbxref=GeneID:4489595;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AHA_1171
NC_008570.1	RefSeq	CDS	1267534	1270188	.	-	0	ID=cds1128;Parent=gene1169;Dbxref=Genbank:YP_855712.1,GeneID:4489595;Name=YP_855712.1;Note=identified by similarity to SP:P27249%3B match to protein family HMM PF01842%3B match to protein family HMM PF01909%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR01693;gbkey=CDS;gene=glnD;product=protein-P-II uridylyltransferase;protein_id=YP_855712.1;transl_table=11
NC_008570.1	RefSeq	gene	1270286	1271074	.	-	.	ID=gene1170;Dbxref=GeneID:4489596;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AHA_1172
NC_008570.1	RefSeq	CDS	1270286	1271074	.	-	0	ID=cds1129;Parent=gene1170;Dbxref=Genbank:YP_855713.1,GeneID:4489596;Name=YP_855713.1;Note=identified by similarity to SP:P07906%3B match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=YP_855713.1;transl_table=11
NC_008570.1	RefSeq	gene	1271434	1272162	.	+	.	ID=gene1171;Dbxref=GeneID:4489597;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AHA_1173
NC_008570.1	RefSeq	CDS	1271434	1272162	.	+	0	ID=cds1130;Parent=gene1171;Dbxref=Genbank:YP_855714.1,GeneID:4489597;Name=YP_855714.1;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=YP_855714.1;transl_table=11
NC_008570.1	RefSeq	gene	1272267	1273148	.	+	.	ID=gene1172;Dbxref=GeneID:4489598;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AHA_1174
NC_008570.1	RefSeq	CDS	1272267	1273148	.	+	0	ID=cds1131;Parent=gene1172;Dbxref=Genbank:YP_855715.1,GeneID:4489598;Name=YP_855715.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=YP_855715.1;transl_table=11
NC_008570.1	RefSeq	gene	1273220	1273954	.	+	.	ID=gene1173;Dbxref=GeneID:4489599;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AHA_1175
NC_008570.1	RefSeq	CDS	1273220	1273954	.	+	0	ID=cds1132;Parent=gene1173;Dbxref=Genbank:YP_855716.1,GeneID:4489599;Name=YP_855716.1;Note=Catalyzes the phosphorylation of UMP to UDP;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=YP_855716.1;transl_table=11
NC_008570.1	RefSeq	gene	1274049	1274606	.	+	.	ID=gene1174;Dbxref=GeneID:4487251;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AHA_1176
NC_008570.1	RefSeq	CDS	1274049	1274606	.	+	0	ID=cds1133;Parent=gene1174;Dbxref=Genbank:YP_855717.1,GeneID:4487251;Name=YP_855717.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=YP_855717.1;transl_table=11
NC_008570.1	RefSeq	gene	1274679	1275455	.	+	.	ID=gene1175;Dbxref=GeneID:4487252;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=AHA_1177
NC_008570.1	RefSeq	CDS	1274679	1275455	.	+	0	ID=cds1134;Parent=gene1175;Dbxref=Genbank:YP_855718.1,GeneID:4487252;Name=YP_855718.1;Note=identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;product=undecaprenyl diphosphate synthase;protein_id=YP_855718.1;transl_table=11
NC_008570.1	RefSeq	gene	1275482	1276339	.	+	.	ID=gene1176;Dbxref=GeneID:4487253;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AHA_1178
NC_008570.1	RefSeq	CDS	1275482	1276339	.	+	0	ID=cds1135;Parent=gene1176;Dbxref=Genbank:YP_855719.1,GeneID:4487253;Name=YP_855719.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA;product=phosphatidate cytidylyltransferase;protein_id=YP_855719.1;transl_table=11
NC_008570.1	RefSeq	gene	1276403	1277596	.	+	.	ID=gene1177;Dbxref=GeneID:4487254;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=AHA_1179
NC_008570.1	RefSeq	CDS	1276403	1277596	.	+	0	ID=cds1136;Parent=gene1177;Dbxref=Genbank:YP_855720.1,GeneID:4487254;Name=YP_855720.1;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=YP_855720.1;transl_table=11
NC_008570.1	RefSeq	gene	1277679	1279031	.	+	.	ID=gene1178;Dbxref=GeneID:4487255;Name=ecfE;gbkey=Gene;gene=ecfE;gene_biotype=protein_coding;locus_tag=AHA_1180
NC_008570.1	RefSeq	CDS	1277679	1279031	.	+	0	ID=cds1137;Parent=gene1178;Dbxref=Genbank:YP_855721.1,GeneID:4487255;Name=YP_855721.1;Note=identified by similarity to SP:P37764%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=ecfE;product=peptidase EcfE;protein_id=YP_855721.1;transl_table=11
NC_008570.1	RefSeq	gene	1279066	1281489	.	+	.	ID=gene1179;Dbxref=GeneID:4487256;Name=AHA_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1181
NC_008570.1	RefSeq	CDS	1279066	1281489	.	+	0	ID=cds1138;Parent=gene1179;Dbxref=Genbank:YP_855722.1,GeneID:4487256;Name=YP_855722.1;Note=identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244;gbkey=CDS;product=OMP85 family outer membrane protein;protein_id=YP_855722.1;transl_table=11
NC_008570.1	RefSeq	gene	1281638	1282150	.	+	.	ID=gene1180;Dbxref=GeneID:4487257;Name=AHA_1182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1182
NC_008570.1	RefSeq	CDS	1281638	1282150	.	+	0	ID=cds1139;Parent=gene1180;Dbxref=Genbank:YP_855723.1,GeneID:4487257;Name=YP_855723.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;product=outer membrane protein;protein_id=YP_855723.1;transl_table=11
NC_008570.1	RefSeq	gene	1282154	1283173	.	+	.	ID=gene1181;Dbxref=GeneID:4487258;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AHA_1183
NC_008570.1	RefSeq	CDS	1282154	1283173	.	+	0	ID=cds1140;Parent=gene1181;Dbxref=Genbank:YP_855724.1,GeneID:4487258;Name=YP_855724.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=YP_855724.1;transl_table=11
NC_008570.1	RefSeq	gene	1283198	1283659	.	+	.	ID=gene1182;Dbxref=GeneID:4487259;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AHA_1184
NC_008570.1	RefSeq	CDS	1283198	1283659	.	+	0	ID=cds1141;Parent=gene1182;Dbxref=Genbank:YP_855725.1,GeneID:4487259;Name=YP_855725.1;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=YP_855725.1;transl_table=11
NC_008570.1	RefSeq	gene	1283665	1284456	.	+	.	ID=gene1183;Dbxref=GeneID:4487260;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AHA_1185
NC_008570.1	RefSeq	CDS	1283665	1284456	.	+	0	ID=cds1142;Parent=gene1183;Dbxref=Genbank:YP_855726.1,GeneID:4487260;Name=YP_855726.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;gene=lpxA;product=UDP-N-acetylglucosamine acyltransferase;protein_id=YP_855726.1;transl_table=11
NC_008570.1	RefSeq	gene	1284449	1285588	.	+	.	ID=gene1184;Dbxref=GeneID:4487261;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AHA_1186
NC_008570.1	RefSeq	CDS	1284449	1285588	.	+	0	ID=cds1143;Parent=gene1184;Dbxref=Genbank:YP_855727.1,GeneID:4487261;Name=YP_855727.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=YP_855727.1;transl_table=11
NC_008570.1	RefSeq	gene	1285619	1286254	.	+	.	ID=gene1185;Dbxref=GeneID:4487262;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AHA_1187
NC_008570.1	RefSeq	CDS	1285619	1286254	.	+	0	ID=cds1144;Parent=gene1185;Dbxref=Genbank:YP_855728.1,GeneID:4487262;Name=YP_855728.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=YP_855728.1;transl_table=11
NC_008570.1	RefSeq	gene	1286293	1289772	.	+	.	ID=gene1186;Dbxref=GeneID:4487263;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AHA_1188
NC_008570.1	RefSeq	CDS	1286293	1289772	.	+	0	ID=cds1145;Parent=gene1186;Dbxref=Genbank:YP_855729.1,GeneID:4487263;Name=YP_855729.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=YP_855729.1;transl_table=11
NC_008570.1	RefSeq	gene	1289753	1290739	.	+	.	ID=gene1187;Dbxref=GeneID:4487264;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AHA_1189
NC_008570.1	RefSeq	CDS	1289753	1290739	.	+	0	ID=cds1146;Parent=gene1187;Dbxref=Genbank:YP_855730.1,GeneID:4487264;Name=YP_855730.1;Note=identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha;protein_id=YP_855730.1;transl_table=11
NC_008570.1	RefSeq	gene	1291144	1292664	.	+	.	ID=gene1188;Dbxref=GeneID:4487265;Name=AHA_1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1190
NC_008570.1	RefSeq	CDS	1291144	1292664	.	+	0	ID=cds1147;Parent=gene1188;Dbxref=Genbank:YP_855731.1,GeneID:4487265;Name=YP_855731.1;Note=regulates the cadBA operon;gbkey=CDS;product=DNA-binding transcriptional activator CadC;protein_id=YP_855731.1;transl_table=11
NC_008570.1	RefSeq	gene	1293430	1294764	.	+	.	ID=gene1189;Dbxref=GeneID:4487266;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AHA_1191
NC_008570.1	RefSeq	CDS	1293430	1294764	.	+	0	ID=cds1148;Parent=gene1189;Dbxref=Genbank:YP_855732.1,GeneID:4487266;Name=YP_855732.1;Note=antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein;gbkey=CDS;gene=cadB;product=lysine/cadaverine antiporter;protein_id=YP_855732.1;transl_table=11
NC_008570.1	RefSeq	gene	1294841	1296973	.	+	.	ID=gene1190;Dbxref=GeneID:4487267;Name=AHA_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1192
NC_008570.1	RefSeq	CDS	1294841	1296973	.	+	0	ID=cds1149;Parent=gene1190;Dbxref=Genbank:YP_855733.1,GeneID:4487267;Name=YP_855733.1;Note=identified by match to protein family HMM PF01276%3B match to protein family HMM PF03709%3B match to protein family HMM PF03711;gbkey=CDS;product=lysine decarboxylase%2C constitutive;protein_id=YP_855733.1;transl_table=11
NC_008570.1	RefSeq	gene	1297046	1297912	.	+	.	ID=gene1191;Dbxref=GeneID:4487268;Name=pdxY-1;gbkey=Gene;gene=pdxY-1;gene_biotype=protein_coding;locus_tag=AHA_1193
NC_008570.1	RefSeq	CDS	1297046	1297912	.	+	0	ID=cds1150;Parent=gene1191;Dbxref=Genbank:YP_855734.1,GeneID:4487268;Name=YP_855734.1;Note=identified by similarity to SP:P77150%3B match to protein family HMM TIGR00687;gbkey=CDS;gene=pdxY-1;product=pyridoxal kinase;protein_id=YP_855734.1;transl_table=11
NC_008570.1	RefSeq	gene	1297922	1299343	.	-	.	ID=gene1192;Dbxref=GeneID:4487269;Name=AHA_1194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1194
NC_008570.1	RefSeq	CDS	1297922	1299343	.	-	0	ID=cds1151;Parent=gene1192;Dbxref=Genbank:YP_855735.1,GeneID:4487269;Name=YP_855735.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=cation (Na+-coupled) multidrug resistance efflux pump;protein_id=YP_855735.1;transl_table=11
NC_008570.1	RefSeq	gene	1299450	1300358	.	-	.	ID=gene1193;Dbxref=GeneID:4487270;Name=AHA_1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1195
NC_008570.1	RefSeq	CDS	1299450	1300358	.	-	0	ID=cds1152;Parent=gene1193;Dbxref=Genbank:YP_855736.1,GeneID:4487270;Name=YP_855736.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YcaN;protein_id=YP_855736.1;transl_table=11
NC_008570.1	RefSeq	gene	1300872	1302158	.	+	.	ID=gene1194;Dbxref=GeneID:4490494;Name=AHA_1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1196
NC_008570.1	RefSeq	CDS	1300872	1302158	.	+	0	ID=cds1153;Parent=gene1194;Dbxref=Genbank:YP_855737.1,GeneID:4490494;Name=YP_855737.1;Note=identified by similarity to SP:P0AAD6%3B match to protein family HMM PF01490%3B match to protein family HMM TIGR00814;gbkey=CDS;product=serine transporter family protein;protein_id=YP_855737.1;transl_table=11
NC_008570.1	RefSeq	gene	1302226	1303266	.	-	.	ID=gene1195;Dbxref=GeneID:4490495;Name=AHA_1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1197
NC_008570.1	RefSeq	CDS	1302226	1303266	.	-	0	ID=cds1154;Parent=gene1195;Dbxref=Genbank:YP_855738.1,GeneID:4490495;Name=YP_855738.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=ribonuclease Z;protein_id=YP_855738.1;transl_table=11
NC_008570.1	RefSeq	gene	1303423	1304325	.	+	.	ID=gene1196;Dbxref=GeneID:4490496;Name=AHA_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1198
NC_008570.1	RefSeq	CDS	1303423	1304325	.	+	0	ID=cds1155;Parent=gene1196;Dbxref=Genbank:YP_855739.1,GeneID:4490496;Name=YP_855739.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855739.1;transl_table=11
NC_008570.1	RefSeq	gene	1304345	1305364	.	-	.	ID=gene1197;Dbxref=GeneID:4490497;Name=AHA_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1199
NC_008570.1	RefSeq	CDS	1304345	1305364	.	-	0	ID=cds1156;Parent=gene1197;Dbxref=Genbank:YP_855740.1,GeneID:4490497;Name=YP_855740.1;gbkey=CDS;product=dienelactone hydrolase domain-containing protein;protein_id=YP_855740.1;transl_table=11
NC_008570.1	RefSeq	gene	1305310	1306221	.	-	.	ID=gene1198;Dbxref=GeneID:4490498;Name=AHA_1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1200
NC_008570.1	RefSeq	CDS	1305310	1306221	.	-	0	ID=cds1157;Parent=gene1198;Dbxref=Genbank:YP_855741.1,GeneID:4490498;Name=YP_855741.1;gbkey=CDS;product=dienelactone hydrolase domain-containing protein;protein_id=YP_855741.1;transl_table=11
NC_008570.1	RefSeq	gene	1306469	1307362	.	+	.	ID=gene1199;Dbxref=GeneID:4490499;Name=AHA_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1201
NC_008570.1	RefSeq	CDS	1306469	1307362	.	+	0	ID=cds1158;Parent=gene1199;Dbxref=Genbank:YP_855742.1,GeneID:4490499;Name=YP_855742.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YcjZ;protein_id=YP_855742.1;transl_table=11
NC_008570.1	RefSeq	gene	1307499	1308779	.	+	.	ID=gene1200;Dbxref=GeneID:4490500;Name=AHA_1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1202
NC_008570.1	RefSeq	CDS	1307499	1308779	.	+	0	ID=cds1159;Parent=gene1200;Dbxref=Genbank:YP_855743.1,GeneID:4490500;Name=YP_855743.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=inner membrane protein YjeH;protein_id=YP_855743.1;transl_table=11
NC_008570.1	RefSeq	gene	1308820	1309359	.	-	.	ID=gene1201;Dbxref=GeneID:4490501;Name=AHA_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1203
NC_008570.1	RefSeq	CDS	1308820	1309359	.	-	0	ID=cds1160;Parent=gene1201;Dbxref=Genbank:YP_855744.1,GeneID:4490501;Name=YP_855744.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=YP_855744.1;transl_table=11
NC_008570.1	RefSeq	gene	1309443	1311182	.	-	.	ID=gene1202;Dbxref=GeneID:4490502;Name=AHA_1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1204
NC_008570.1	RefSeq	CDS	1309443	1311182	.	-	0	ID=cds1161;Parent=gene1202;Dbxref=Genbank:YP_855745.1,GeneID:4490502;Name=YP_855745.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_855745.1;transl_table=11
NC_008570.1	RefSeq	gene	1311547	1311984	.	-	.	ID=gene1203;Dbxref=GeneID:4490503;Name=AHA_1205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1205
NC_008570.1	RefSeq	CDS	1311547	1311984	.	-	0	ID=cds1162;Parent=gene1203;Dbxref=Genbank:YP_855746.1,GeneID:4490503;Name=YP_855746.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855746.1;transl_table=11
NC_008570.1	RefSeq	gene	1312096	1314141	.	-	.	ID=gene1204;Dbxref=GeneID:4490504;Name=AHA_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1206
NC_008570.1	RefSeq	CDS	1312096	1314141	.	-	0	ID=cds1163;Parent=gene1204;Dbxref=Genbank:YP_855747.1,GeneID:4490504;Name=YP_855747.1;Note=identified by match to protein family HMM PF01431%3B match to protein family HMM PF05649;gbkey=CDS;product=M13 family peptidase;protein_id=YP_855747.1;transl_table=11
NC_008570.1	RefSeq	gene	1314255	1315595	.	+	.	ID=gene1205;Dbxref=GeneID:4490505;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AHA_1207
NC_008570.1	RefSeq	CDS	1314255	1315595	.	+	0	ID=cds1164;Parent=gene1205;Dbxref=Genbank:YP_855748.1,GeneID:4490505;Name=YP_855748.1;Note=identified by similarity to SP:P52097%3B match to protein family HMM PF01171%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthetase;protein_id=YP_855748.1;transl_table=11
NC_008570.1	RefSeq	gene	1315671	1316606	.	-	.	ID=gene1206;Dbxref=GeneID:4490506;Name=AHA_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1208
NC_008570.1	RefSeq	CDS	1315671	1316606	.	-	0	ID=cds1165;Parent=gene1206;Dbxref=Genbank:YP_855749.1,GeneID:4490506;Name=YP_855749.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_855749.1;transl_table=11
NC_008570.1	RefSeq	gene	1316704	1318644	.	+	.	ID=gene1207;Dbxref=GeneID:4490507;Name=AHA_1209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1209
NC_008570.1	RefSeq	CDS	1316704	1318644	.	+	0	ID=cds1166;Parent=gene1207;Dbxref=Genbank:YP_855750.1,GeneID:4490507;Name=YP_855750.1;Note=identified by match to protein family HMM PF00999%3B match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;product=Kef-type K+ transport system membrane protein;protein_id=YP_855750.1;transl_table=11
NC_008570.1	RefSeq	gene	1318726	1319871	.	-	.	ID=gene1208;Dbxref=GeneID:4490508;Name=AHA_1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1210
NC_008570.1	RefSeq	CDS	1318726	1319871	.	-	0	ID=cds1167;Parent=gene1208;Dbxref=Genbank:YP_855751.1,GeneID:4490508;Name=YP_855751.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=patatin;protein_id=YP_855751.1;transl_table=11
NC_008570.1	RefSeq	gene	1319993	1320811	.	-	.	ID=gene1209;Dbxref=GeneID:4490509;Name=AHA_1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1211
NC_008570.1	RefSeq	CDS	1319993	1320811	.	-	0	ID=cds1168;Parent=gene1209;Dbxref=Genbank:YP_855752.1,GeneID:4490509;Name=YP_855752.1;gbkey=CDS;product=esterase/lipase;protein_id=YP_855752.1;transl_table=11
NC_008570.1	RefSeq	gene	1320934	1321515	.	-	.	ID=gene1210;Dbxref=GeneID:4490510;Name=AHA_1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1212
NC_008570.1	RefSeq	CDS	1320934	1321515	.	-	0	ID=cds1169;Parent=gene1210;Dbxref=Genbank:YP_855753.1,GeneID:4490510;Name=YP_855753.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator;protein_id=YP_855753.1;transl_table=11
NC_008570.1	RefSeq	gene	1321603	1322247	.	-	.	ID=gene1211;Dbxref=GeneID:4490511;Name=AHA_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1213
NC_008570.1	RefSeq	CDS	1321603	1322247	.	-	0	ID=cds1170;Parent=gene1211;Dbxref=Genbank:YP_855754.1,GeneID:4490511;Name=YP_855754.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=positive regulator AgmR;protein_id=YP_855754.1;transl_table=11
NC_008570.1	RefSeq	gene	1322406	1323032	.	+	.	ID=gene1212;Dbxref=GeneID:4490512;Name=AHA_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1214
NC_008570.1	RefSeq	CDS	1322406	1323032	.	+	0	ID=cds1171;Parent=gene1212;Dbxref=Genbank:YP_855755.1,GeneID:4490512;Name=YP_855755.1;Note=identified by match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_855755.1;transl_table=11
NC_008570.1	RefSeq	gene	1323129	1325237	.	-	.	ID=gene1213;Dbxref=GeneID:4490591;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AHA_1215
NC_008570.1	RefSeq	CDS	1323129	1325237	.	-	0	ID=cds1172;Parent=gene1213;Dbxref=Genbank:YP_855756.1,GeneID:4490591;Name=YP_855756.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=periplasmic alpha-amylase;protein_id=YP_855756.1;transl_table=11
NC_008570.1	RefSeq	gene	1325445	1326608	.	-	.	ID=gene1214;Dbxref=GeneID:4490592;Name=AHA_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1216
NC_008570.1	RefSeq	CDS	1325445	1326608	.	-	0	ID=cds1173;Parent=gene1214;Dbxref=Genbank:YP_855757.1,GeneID:4490592;Name=YP_855757.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855757.1;transl_table=11
NC_008570.1	RefSeq	gene	1326608	1326979	.	-	.	ID=gene1215;Dbxref=GeneID:4490593;Name=AHA_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1217
NC_008570.1	RefSeq	CDS	1326608	1326979	.	-	0	ID=cds1174;Parent=gene1215;Dbxref=Genbank:YP_855758.1,GeneID:4490593;Name=YP_855758.1;Note=identified by match to protein family HMM PF04138;gbkey=CDS;product=hypothetical protein;protein_id=YP_855758.1;transl_table=11
NC_008570.1	RefSeq	gene	1326976	1328037	.	-	.	ID=gene1216;Dbxref=GeneID:4490594;Name=AHA_1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1218
NC_008570.1	RefSeq	CDS	1326976	1328037	.	-	0	ID=cds1175;Parent=gene1216;Dbxref=Genbank:YP_855759.1,GeneID:4490594;Name=YP_855759.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=bactoprenol glucosyl transferase;protein_id=YP_855759.1;transl_table=11
NC_008570.1	RefSeq	gene	1328094	1328639	.	-	.	ID=gene1217;Dbxref=GeneID:4490595;Name=AHA_1219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1219
NC_008570.1	RefSeq	CDS	1328094	1328639	.	-	0	ID=cds1176;Parent=gene1217;Dbxref=Genbank:YP_855760.1,GeneID:4490595;Name=YP_855760.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855760.1;transl_table=11
NC_008570.1	RefSeq	gene	1328953	1329063	.	-	.	ID=gene1218;Dbxref=GeneID:4490596;Name=AHA_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1220
NC_008570.1	RefSeq	CDS	1328953	1329063	.	-	0	ID=cds1177;Parent=gene1218;Dbxref=Genbank:YP_855761.1,GeneID:4490596;Name=YP_855761.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855761.1;transl_table=11
NC_008570.1	RefSeq	gene	1329044	1329736	.	+	.	ID=gene1219;Dbxref=GeneID:4490597;Name=AHA_1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1221
NC_008570.1	RefSeq	CDS	1329044	1329736	.	+	0	ID=cds1178;Parent=gene1219;Dbxref=Genbank:YP_855762.1,GeneID:4490597;Name=YP_855762.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_855762.1;transl_table=11
NC_008570.1	RefSeq	gene	1330001	1331302	.	+	.	ID=gene1220;Dbxref=GeneID:4490598;Name=AHA_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1222
NC_008570.1	RefSeq	CDS	1330001	1331302	.	+	0	ID=cds1179;Parent=gene1220;Dbxref=Genbank:YP_855763.1,GeneID:4490598;Name=YP_855763.1;Note=identified by match to protein family HMM PF01471;gbkey=CDS;product=cell wall degradation protein;protein_id=YP_855763.1;transl_table=11
NC_008570.1	RefSeq	gene	1331453	1331998	.	+	.	ID=gene1221;Dbxref=GeneID:4490599;Name=AHA_1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1223
NC_008570.1	RefSeq	CDS	1331453	1331998	.	+	0	ID=cds1180;Parent=gene1221;Dbxref=Genbank:YP_855764.1,GeneID:4490599;Name=YP_855764.1;Note=identified by match to protein family HMM PF02557%3B match to protein family HMM PF05951%3B match to protein family HMM TIGR01409;gbkey=CDS;product=M15 family non-peptidase;protein_id=YP_855764.1;transl_table=11
NC_008570.1	RefSeq	gene	1332091	1332342	.	+	.	ID=gene1222;Dbxref=GeneID:4490600;Name=AHA_1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1224
NC_008570.1	RefSeq	CDS	1332091	1332342	.	+	0	ID=cds1181;Parent=gene1222;Dbxref=Genbank:YP_855765.1,GeneID:4490600;Name=YP_855765.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855765.1;transl_table=11
NC_008570.1	RefSeq	gene	1332437	1333051	.	-	.	ID=gene1223;Dbxref=GeneID:4490601;Name=AHA_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1225
NC_008570.1	RefSeq	CDS	1332437	1333051	.	-	0	ID=cds1182;Parent=gene1223;Dbxref=Genbank:YP_855766.1,GeneID:4490601;Name=YP_855766.1;Note=identified by match to protein family HMM PF03458;gbkey=CDS;product=hypothetical protein;protein_id=YP_855766.1;transl_table=11
NC_008570.1	RefSeq	gene	1333194	1333958	.	-	.	ID=gene1224;Dbxref=GeneID:4490602;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AHA_1226
NC_008570.1	RefSeq	CDS	1333194	1333958	.	-	0	ID=cds1183;Parent=gene1224;Dbxref=Genbank:YP_855767.1,GeneID:4490602;Name=YP_855767.1;Note=identified by match to protein family HMM PF04401;gbkey=CDS;gene=cysZ;product=protein CysZ;protein_id=YP_855767.1;transl_table=11
NC_008570.1	RefSeq	gene	1334068	1337442	.	+	.	ID=gene1225;Dbxref=GeneID:4490603;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=AHA_1227
NC_008570.1	RefSeq	CDS	1334068	1337442	.	+	0	ID=cds1184;Parent=gene1225;Dbxref=Genbank:YP_855768.1,GeneID:4490603;Name=YP_855768.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR02168;gbkey=CDS;gene=smc;product=chromosome segregation protein SMC;protein_id=YP_855768.1;transl_table=11
NC_008570.1	RefSeq	gene	1337458	1338570	.	+	.	ID=gene1226;Dbxref=GeneID:4490604;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AHA_1228
NC_008570.1	RefSeq	CDS	1337458	1338570	.	+	0	ID=cds1185;Parent=gene1226;Dbxref=Genbank:YP_855769.1,GeneID:4490604;Name=YP_855769.1;Note=identified by similarity to SP:P77173%3B match to protein family HMM PF04354%3B match to protein family HMM TIGR02205;gbkey=CDS;gene=zipA;product=cell division protein ZipA;protein_id=YP_855769.1;transl_table=11
NC_008570.1	RefSeq	gene	1338670	1340676	.	+	.	ID=gene1227;Dbxref=GeneID:4490605;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AHA_1229
NC_008570.1	RefSeq	CDS	1338670	1340676	.	+	0	ID=cds1186;Parent=gene1227;Dbxref=Genbank:YP_855770.1,GeneID:4490605;Name=YP_855770.1;Note=identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase;protein_id=YP_855770.1;transl_table=11
NC_008570.1	RefSeq	gene	1340750	1341727	.	-	.	ID=gene1228;Dbxref=GeneID:4490606;Name=AHA_1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1230
NC_008570.1	RefSeq	CDS	1340750	1341727	.	-	0	ID=cds1187;Parent=gene1228;Dbxref=Genbank:YP_855771.1,GeneID:4490606;Name=YP_855771.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=YP_855771.1;transl_table=11
NC_008570.1	RefSeq	gene	1342170	1344287	.	+	.	ID=gene1229;Dbxref=GeneID:4490607;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AHA_1231
NC_008570.1	RefSeq	CDS	1342170	1344287	.	+	0	ID=cds1188;Parent=gene1229;Dbxref=Genbank:YP_855772.1,GeneID:4490607;Name=YP_855772.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside triphosphate reductase;protein_id=YP_855772.1;transl_table=11
NC_008570.1	RefSeq	gene	1344417	1344926	.	+	.	ID=gene1230;Dbxref=GeneID:4490608;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AHA_1232
NC_008570.1	RefSeq	CDS	1344417	1344926	.	+	0	ID=cds1189;Parent=gene1230;Dbxref=Genbank:YP_855773.1,GeneID:4490608;Name=YP_855773.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleotide reductase-activating protein;protein_id=YP_855773.1;transl_table=11
NC_008570.1	RefSeq	gene	1344964	1345161	.	+	.	ID=gene1231;Dbxref=GeneID:4490609;Name=AHA_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1233
NC_008570.1	RefSeq	CDS	1344964	1345161	.	+	0	ID=cds1190;Parent=gene1231;Dbxref=Genbank:YP_855774.1,GeneID:4490609;Name=YP_855774.1;Note=identified by match to protein family HMM PF01679;gbkey=CDS;product=hypothetical protein;protein_id=YP_855774.1;transl_table=11
NC_008570.1	RefSeq	gene	1345306	1345698	.	+	.	ID=gene1232;Dbxref=GeneID:4490610;Name=AHA_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1234
NC_008570.1	RefSeq	CDS	1345306	1345698	.	+	0	ID=cds1191;Parent=gene1232;Dbxref=Genbank:YP_855775.1,GeneID:4490610;Name=YP_855775.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855775.1;transl_table=11
NC_008570.1	RefSeq	gene	1345730	1346089	.	-	.	ID=gene1233;Dbxref=GeneID:4488616;Name=AHA_1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1235
NC_008570.1	RefSeq	CDS	1345730	1346089	.	-	0	ID=cds1192;Parent=gene1233;Dbxref=Genbank:YP_855776.1,GeneID:4488616;Name=YP_855776.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855776.1;transl_table=11
NC_008570.1	RefSeq	gene	1346055	1347104	.	+	.	ID=gene1234;Dbxref=GeneID:4488617;Name=AHA_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1237
NC_008570.1	RefSeq	CDS	1346055	1347104	.	+	0	ID=cds1193;Parent=gene1234;Dbxref=Genbank:YP_855777.1,GeneID:4488617;Name=YP_855777.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855777.1;transl_table=11
NC_008570.1	RefSeq	gene	1346217	1346978	.	-	.	ID=gene1235;Dbxref=GeneID:4488618;Name=AHA_1236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1236
NC_008570.1	RefSeq	CDS	1346217	1346978	.	-	0	ID=cds1194;Parent=gene1235;Dbxref=Genbank:YP_855778.1,GeneID:4488618;Name=YP_855778.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_855778.1;transl_table=11
NC_008570.1	RefSeq	gene	1347120	1348148	.	-	.	ID=gene1236;Dbxref=GeneID:4488619;Name=AHA_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1238
NC_008570.1	RefSeq	CDS	1347120	1348148	.	-	0	ID=cds1195;Parent=gene1236;Dbxref=Genbank:YP_855779.1,GeneID:4488619;Name=YP_855779.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855779.1;transl_table=11
NC_008570.1	RefSeq	gene	1348159	1349214	.	-	.	ID=gene1237;Dbxref=GeneID:4488620;Name=AHA_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1239
NC_008570.1	RefSeq	CDS	1348159	1349214	.	-	0	ID=cds1196;Parent=gene1237;Dbxref=Genbank:YP_855780.1,GeneID:4488620;Name=YP_855780.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_855780.1;transl_table=11
NC_008570.1	RefSeq	gene	1349229	1349696	.	-	.	ID=gene1238;Dbxref=GeneID:4488621;Name=AHA_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1240
NC_008570.1	RefSeq	CDS	1349229	1349696	.	-	0	ID=cds1197;Parent=gene1238;Dbxref=Genbank:YP_855781.1,GeneID:4488621;Name=YP_855781.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_855781.1;transl_table=11
NC_008570.1	RefSeq	gene	1350015	1350206	.	+	.	ID=gene1239;Dbxref=GeneID:4488622;Name=AHA_1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1241
NC_008570.1	RefSeq	CDS	1350015	1350206	.	+	0	ID=cds1198;Parent=gene1239;Dbxref=Genbank:YP_855782.1,GeneID:4488622;Name=YP_855782.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855782.1;transl_table=11
NC_008570.1	RefSeq	gene	1350752	1352059	.	+	.	ID=gene1240;Dbxref=GeneID:4488623;Name=AHA_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1242
NC_008570.1	RefSeq	CDS	1350752	1352059	.	+	0	ID=cds1199;Parent=gene1240;Dbxref=Genbank:YP_855783.1,GeneID:4488623;Name=YP_855783.1;Note=identified by match to protein family HMM PF03390;gbkey=CDS;product=sodium:citrate symporter;protein_id=YP_855783.1;transl_table=11
NC_008570.1	RefSeq	gene	1352071	1353621	.	+	.	ID=gene1241;Dbxref=GeneID:4488624;Name=AHA_1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1243
NC_008570.1	RefSeq	CDS	1352071	1353621	.	+	0	ID=cds1200;Parent=gene1241;Dbxref=Genbank:YP_855784.2,GeneID:4488624;Name=YP_855784.2;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_855784.2;transl_table=11
NC_008570.1	RefSeq	gene	1353639	1355207	.	+	.	ID=gene1242;Dbxref=GeneID:4488625;Name=AHA_1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1244
NC_008570.1	RefSeq	CDS	1353639	1355207	.	+	0	ID=cds1201;Parent=gene1242;Dbxref=Genbank:YP_855785.1,GeneID:4488625;Name=YP_855785.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;product=sensor kinase CitA;protein_id=YP_855785.1;transl_table=11
NC_008570.1	RefSeq	gene	1355211	1355903	.	+	.	ID=gene1243;Dbxref=GeneID:4488626;Name=AHA_1245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1245
NC_008570.1	RefSeq	CDS	1355211	1355903	.	+	0	ID=cds1202;Parent=gene1243;Dbxref=Genbank:YP_855786.1,GeneID:4488626;Name=YP_855786.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=transcriptional regulatory protein DpiA;protein_id=YP_855786.1;transl_table=11
NC_008570.1	RefSeq	gene	1356001	1356900	.	-	.	ID=gene1244;Dbxref=GeneID:4488627;Name=AHA_1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1246
NC_008570.1	RefSeq	CDS	1356001	1356900	.	-	0	ID=cds1203;Parent=gene1244;Dbxref=Genbank:YP_855787.1,GeneID:4488627;Name=YP_855787.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_855787.1;transl_table=11
NC_008570.1	RefSeq	gene	1356997	1357803	.	+	.	ID=gene1245;Dbxref=GeneID:4488628;Name=AHA_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1247
NC_008570.1	RefSeq	CDS	1356997	1357803	.	+	0	ID=cds1204;Parent=gene1245;Dbxref=Genbank:YP_855788.1,GeneID:4488628;Name=YP_855788.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311%3B match to protein family HMM PF07883;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_855788.1;transl_table=11
NC_008570.1	RefSeq	gene	1357867	1359429	.	-	.	ID=gene1246;Dbxref=GeneID:4488629;Name=AHA_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1248
NC_008570.1	RefSeq	CDS	1357867	1359429	.	-	0	ID=cds1205;Parent=gene1246;Dbxref=Genbank:YP_855789.1,GeneID:4488629;Name=YP_855789.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_855789.1;transl_table=11
NC_008570.1	RefSeq	gene	1359621	1361297	.	+	.	ID=gene1247;Dbxref=GeneID:4488630;Name=AHA_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1249
NC_008570.1	RefSeq	CDS	1359621	1361297	.	+	0	ID=cds1206;Parent=gene1247;Dbxref=Genbank:YP_855790.1,GeneID:4488630;Name=YP_855790.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954;gbkey=CDS;product=acetoin catabolism regulatory protein;protein_id=YP_855790.1;transl_table=11
NC_008570.1	RefSeq	gene	1361384	1362559	.	+	.	ID=gene1248;Dbxref=GeneID:4488631;Name=AHA_1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1250
NC_008570.1	RefSeq	CDS	1361384	1362559	.	+	0	ID=cds1207;Parent=gene1248;Dbxref=Genbank:YP_855791.1,GeneID:4488631;Name=YP_855791.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;product=glutaryl-CoA dehydrogenase;protein_id=YP_855791.1;transl_table=11
NC_008570.1	RefSeq	gene	1362559	1363713	.	+	.	ID=gene1249;Dbxref=GeneID:4488632;Name=AHA_1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1251
NC_008570.1	RefSeq	CDS	1362559	1363713	.	+	0	ID=cds1208;Parent=gene1249;Dbxref=Genbank:YP_855792.1,GeneID:4488632;Name=YP_855792.1;Note=identified by match to protein family HMM PF02515;gbkey=CDS;product=caib/baif family protein;protein_id=YP_855792.1;transl_table=11
NC_008570.1	RefSeq	gene	1363753	1364250	.	+	.	ID=gene1250;Dbxref=GeneID:4488633;Name=AHA_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1252
NC_008570.1	RefSeq	CDS	1363753	1364250	.	+	0	ID=cds1209;Parent=gene1250;Dbxref=Genbank:YP_855793.1,GeneID:4488633;Name=YP_855793.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=lactoylglutathione lyase;protein_id=YP_855793.1;transl_table=11
NC_008570.1	RefSeq	gene	1364353	1365042	.	+	.	ID=gene1251;Dbxref=GeneID:4488634;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AHA_1253
NC_008570.1	RefSeq	CDS	1364353	1365042	.	+	0	ID=cds1210;Parent=gene1251;Dbxref=Genbank:YP_855794.1,GeneID:4488634;Name=YP_855794.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486%3B match to protein family HMM TIGR02154;gbkey=CDS;gene=phoB;product=phosphate regulon transcriptional regulatory protein PhoB;protein_id=YP_855794.1;transl_table=11
NC_008570.1	RefSeq	gene	1365051	1366346	.	+	.	ID=gene1252;Dbxref=GeneID:4488811;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AHA_1254
NC_008570.1	RefSeq	CDS	1365051	1366346	.	+	0	ID=cds1211;Parent=gene1252;Dbxref=Genbank:YP_855795.1,GeneID:4488811;Name=YP_855795.1;Note=identified by similarity to SP:P08400%3B match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR02966;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein PhoR;protein_id=YP_855795.1;transl_table=11
NC_008570.1	RefSeq	gene	1366723	1367697	.	+	.	ID=gene1253;Dbxref=GeneID:4488812;Name=AHA_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1255
NC_008570.1	RefSeq	CDS	1366723	1367697	.	+	0	ID=cds1212;Parent=gene1253;Dbxref=Genbank:YP_855796.1,GeneID:4488812;Name=YP_855796.1;Note=identified by match to protein family HMM TIGR02136;gbkey=CDS;product=phosphate-binding protein;protein_id=YP_855796.1;transl_table=11
NC_008570.1	RefSeq	gene	1367861	1368667	.	+	.	ID=gene1254;Dbxref=GeneID:4488813;Name=AHA_1256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1256
NC_008570.1	RefSeq	CDS	1367861	1368667	.	+	0	ID=cds1213;Parent=gene1254;Dbxref=Genbank:YP_855797.1,GeneID:4488813;Name=YP_855797.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;product=M48 family peptidase;protein_id=YP_855797.1;transl_table=11
NC_008570.1	RefSeq	gene	1368655	1369161	.	+	.	ID=gene1255;Dbxref=GeneID:4488814;Name=AHA_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1257
NC_008570.1	RefSeq	CDS	1368655	1369161	.	+	0	ID=cds1214;Parent=gene1255;Dbxref=Genbank:YP_855798.1,GeneID:4488814;Name=YP_855798.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=N-acetyltransferase GCN5;protein_id=YP_855798.1;transl_table=11
NC_008570.1	RefSeq	gene	1369271	1370173	.	+	.	ID=gene1256;Dbxref=GeneID:4488815;Name=AHA_1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1258
NC_008570.1	RefSeq	CDS	1369271	1370173	.	+	0	ID=cds1215;Parent=gene1256;Dbxref=Genbank:YP_855799.1,GeneID:4488815;Name=YP_855799.1;Note=identified by match to protein family HMM PF00480;gbkey=CDS;product=ROK family protein;protein_id=YP_855799.1;transl_table=11
NC_008570.1	RefSeq	gene	1370216	1370941	.	+	.	ID=gene1257;Dbxref=GeneID:4488816;Name=AHA_1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1259
NC_008570.1	RefSeq	CDS	1370216	1370941	.	+	0	ID=cds1216;Parent=gene1257;Dbxref=Genbank:YP_855800.1,GeneID:4488816;Name=YP_855800.1;Note=identified by match to protein family HMM PF03932;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=YP_855800.1;transl_table=11
NC_008570.1	RefSeq	gene	1370950	1371069	.	+	.	ID=gene1258;Dbxref=GeneID:4488817;Name=AHA_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1260
NC_008570.1	RefSeq	CDS	1370950	1371069	.	+	0	ID=cds1217;Parent=gene1258;Dbxref=Genbank:YP_855801.1,GeneID:4488817;Name=YP_855801.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855801.1;transl_table=11
NC_008570.1	RefSeq	gene	1371255	1371866	.	+	.	ID=gene1259;Dbxref=GeneID:4488818;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AHA_1261
NC_008570.1	RefSeq	CDS	1371255	1371866	.	+	0	ID=cds1218;Parent=gene1259;Dbxref=Genbank:YP_855802.1,GeneID:4488818;Name=YP_855802.1;Note=identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346;gbkey=CDS;gene=fklB;product=FKBP-type peptidyl-prolyl cis-trans isomerase FklB;protein_id=YP_855802.1;transl_table=11
NC_008570.1	RefSeq	gene	1371996	1372877	.	+	.	ID=gene1260;Dbxref=GeneID:4488819;Name=AHA_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1262
NC_008570.1	RefSeq	CDS	1371996	1372877	.	+	0	ID=cds1219;Parent=gene1260;Dbxref=Genbank:YP_855803.1,GeneID:4488819;Name=YP_855803.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_855803.1;transl_table=11
NC_008570.1	RefSeq	gene	1372951	1373964	.	+	.	ID=gene1261;Dbxref=GeneID:4488820;Name=AHA_1263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1263
NC_008570.1	RefSeq	CDS	1372951	1373964	.	+	0	ID=cds1220;Parent=gene1261;Dbxref=Genbank:YP_855804.1,GeneID:4488820;Name=YP_855804.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=ABC transporter permease;protein_id=YP_855804.1;transl_table=11
NC_008570.1	RefSeq	gene	1373961	1374275	.	+	.	ID=gene1262;Dbxref=GeneID:4488821;Name=AHA_1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1264
NC_008570.1	RefSeq	CDS	1373961	1374275	.	+	0	ID=cds1221;Parent=gene1262;Dbxref=Genbank:YP_855805.1,GeneID:4488821;Name=YP_855805.1;Note=identified by similarity to GB:AAN53512.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855805.1;transl_table=11
NC_008570.1	RefSeq	gene	1374332	1374694	.	-	.	ID=gene1263;Dbxref=GeneID:4488822;Name=AHA_1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1265
NC_008570.1	RefSeq	CDS	1374332	1374694	.	-	0	ID=cds1222;Parent=gene1263;Dbxref=Genbank:YP_855806.1,GeneID:4488822;Name=YP_855806.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855806.1;transl_table=11
NC_008570.1	RefSeq	gene	1374736	1375239	.	+	.	ID=gene1264;Dbxref=GeneID:4488823;Name=AHA_1266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1266
NC_008570.1	RefSeq	CDS	1374736	1375239	.	+	0	ID=cds1223;Parent=gene1264;Dbxref=Genbank:YP_855807.1,GeneID:4488823;Name=YP_855807.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=nudix hydrolase 3;protein_id=YP_855807.1;transl_table=11
NC_008570.1	RefSeq	gene	1375303	1376229	.	-	.	ID=gene1265;Dbxref=GeneID:4488824;Name=AHA_1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1267
NC_008570.1	RefSeq	CDS	1375303	1376229	.	-	0	ID=cds1224;Parent=gene1265;Dbxref=Genbank:YP_855808.1,GeneID:4488824;Name=YP_855808.1;gbkey=CDS;product=phenylacetate-CoA ligase;protein_id=YP_855808.1;transl_table=11
NC_008570.1	RefSeq	gene	1376356	1376829	.	+	.	ID=gene1266;Dbxref=GeneID:4488825;Name=AHA_1268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1268
NC_008570.1	RefSeq	CDS	1376356	1376829	.	+	0	ID=cds1225;Parent=gene1266;Dbxref=Genbank:YP_855809.1,GeneID:4488825;Name=YP_855809.1;Note=identified by match to protein family HMM PF00578;gbkey=CDS;product=peroxiredoxin;protein_id=YP_855809.1;transl_table=11
NC_008570.1	RefSeq	gene	1376954	1377922	.	+	.	ID=gene1267;Dbxref=GeneID:4488826;Name=AHA_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1269
NC_008570.1	RefSeq	CDS	1376954	1377922	.	+	0	ID=cds1226;Parent=gene1267;Dbxref=Genbank:YP_855810.1,GeneID:4488826;Name=YP_855810.1;Note=identified by match to protein family HMM PF01699%3B match to protein family HMM TIGR00367;gbkey=CDS;product=K+-dependent Na+/Ca+ exchanger-like protein;protein_id=YP_855810.1;transl_table=11
NC_008570.1	RefSeq	gene	1377992	1379143	.	-	.	ID=gene1268;Dbxref=GeneID:4488827;Name=AHA_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1270
NC_008570.1	RefSeq	CDS	1377992	1379143	.	-	0	ID=cds1227;Parent=gene1268;Dbxref=Genbank:YP_855811.1,GeneID:4488827;Name=YP_855811.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;product=ornithine decarboxylase;protein_id=YP_855811.1;transl_table=11
NC_008570.1	RefSeq	gene	1379859	1381235	.	+	.	ID=gene1269;Dbxref=GeneID:4488828;Name=agcS-1;gbkey=Gene;gene=agcS-1;gene_biotype=protein_coding;locus_tag=AHA_1271
NC_008570.1	RefSeq	CDS	1379859	1381235	.	+	0	ID=cds1228;Parent=gene1269;Dbxref=Genbank:YP_855812.1,GeneID:4488828;Name=YP_855812.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS-1;product=amino acid carrier protein;protein_id=YP_855812.1;transl_table=11
NC_008570.1	RefSeq	gene	1381345	1382046	.	-	.	ID=gene1270;Dbxref=GeneID:4488829;Name=AHA_1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1272
NC_008570.1	RefSeq	CDS	1381345	1382046	.	-	0	ID=cds1229;Parent=gene1270;Dbxref=Genbank:YP_855813.1,GeneID:4488829;Name=YP_855813.1;Note=identified by match to protein family HMM PF03099;gbkey=CDS;product=protein ligase;protein_id=YP_855813.1;transl_table=11
NC_008570.1	RefSeq	gene	1382146	1383543	.	-	.	ID=gene1271;Dbxref=GeneID:4488830;Name=yicE;gbkey=Gene;gene=yicE;gene_biotype=protein_coding;locus_tag=AHA_1273
NC_008570.1	RefSeq	CDS	1382146	1383543	.	-	0	ID=cds1230;Parent=gene1271;Dbxref=Genbank:YP_855814.1,GeneID:4488830;Name=YP_855814.1;Note=identified by similarity to GB:AAN82915.1%3B match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;gene=yicE;product=xanthine permease;protein_id=YP_855814.1;transl_table=11
NC_008570.1	RefSeq	gene	1383790	1384929	.	+	.	ID=gene1272;Dbxref=GeneID:4490707;Name=AHA_1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1274
NC_008570.1	RefSeq	CDS	1383790	1384929	.	+	0	ID=cds1231;Parent=gene1272;Dbxref=Genbank:YP_855815.1,GeneID:4490707;Name=YP_855815.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=response regulator PleD (Stalked cell differentiation-controllingprotein);protein_id=YP_855815.1;transl_table=11
NC_008570.1	RefSeq	gene	1384964	1385212	.	-	.	ID=gene1273;Dbxref=GeneID:4490708;Name=AHA_1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1275
NC_008570.1	RefSeq	CDS	1384964	1385212	.	-	0	ID=cds1232;Parent=gene1273;Dbxref=Genbank:YP_855816.1,GeneID:4490708;Name=YP_855816.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855816.1;transl_table=11
NC_008570.1	RefSeq	gene	1385363	1386742	.	-	.	ID=gene1274;Dbxref=GeneID:4490709;Name=AHA_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1276
NC_008570.1	RefSeq	CDS	1385363	1386742	.	-	0	ID=cds1233;Parent=gene1274;Dbxref=Genbank:YP_855817.1,GeneID:4490709;Name=YP_855817.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=mate efflux family protein;protein_id=YP_855817.1;transl_table=11
NC_008570.1	RefSeq	gene	1386914	1387720	.	+	.	ID=gene1275;Dbxref=GeneID:4490710;Name=AHA_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1277
NC_008570.1	RefSeq	CDS	1386914	1387720	.	+	0	ID=cds1234;Parent=gene1275;Dbxref=Genbank:YP_855818.1,GeneID:4490710;Name=YP_855818.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_855818.1;transl_table=11
NC_008570.1	RefSeq	gene	1387789	1389483	.	+	.	ID=gene1276;Dbxref=GeneID:4490711;Name=AHA_1278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1278
NC_008570.1	RefSeq	CDS	1387789	1389483	.	+	0	ID=cds1235;Parent=gene1276;Dbxref=Genbank:YP_855819.2,GeneID:4490711;Name=YP_855819.2;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_855819.2;transl_table=11
NC_008570.1	RefSeq	gene	1389624	1390679	.	-	.	ID=gene1277;Dbxref=GeneID:4490712;Name=AHA_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1279
NC_008570.1	RefSeq	CDS	1389624	1390679	.	-	0	ID=cds1236;Parent=gene1277;Dbxref=Genbank:YP_855820.1,GeneID:4490712;Name=YP_855820.1;Note=identified by match to protein family HMM PF00691%3B match to protein family HMM PF01389;gbkey=CDS;product=major outer membrane protein OmpAII;protein_id=YP_855820.1;transl_table=11
NC_008570.1	RefSeq	gene	1390891	1391892	.	-	.	ID=gene1278;Dbxref=GeneID:4490713;Name=AHA_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1280
NC_008570.1	RefSeq	CDS	1390891	1391892	.	-	0	ID=cds1237;Parent=gene1278;Dbxref=Genbank:YP_855821.1,GeneID:4490713;Name=YP_855821.1;Note=identified by match to protein family HMM PF00691%3B match to protein family HMM PF01389;gbkey=CDS;product=major outer membrane protein OmpAII;protein_id=YP_855821.1;transl_table=11
NC_008570.1	RefSeq	gene	1392324	1393358	.	-	.	ID=gene1279;Dbxref=GeneID:4490714;Name=AHA_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1281
NC_008570.1	RefSeq	CDS	1392324	1393358	.	-	0	ID=cds1238;Parent=gene1279;Dbxref=Genbank:YP_855822.1,GeneID:4490714;Name=YP_855822.1;Note=identified by match to protein family HMM PF00691%3B match to protein family HMM PF01389;gbkey=CDS;product=major outer membrane protein;protein_id=YP_855822.1;transl_table=11
NC_008570.1	RefSeq	gene	1393667	1394263	.	-	.	ID=gene1280;Dbxref=GeneID:4490715;Name=AHA_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1282
NC_008570.1	RefSeq	CDS	1393667	1394263	.	-	0	ID=cds1239;Parent=gene1280;Dbxref=Genbank:YP_855823.1,GeneID:4490715;Name=YP_855823.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855823.1;transl_table=11
NC_008570.1	RefSeq	gene	1394522	1394788	.	+	.	ID=gene1281;Dbxref=GeneID:4490716;Name=AHA_1283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1283
NC_008570.1	RefSeq	CDS	1394522	1394788	.	+	0	ID=cds1240;Parent=gene1281;Dbxref=Genbank:YP_855824.1,GeneID:4490716;Name=YP_855824.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional protein;protein_id=YP_855824.1;transl_table=11
NC_008570.1	RefSeq	gene	1394993	1396354	.	+	.	ID=gene1282;Dbxref=GeneID:4490717;Name=AHA_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1284
NC_008570.1	RefSeq	CDS	1394993	1396354	.	+	0	ID=cds1241;Parent=gene1282;Dbxref=Genbank:YP_855825.1,GeneID:4490717;Name=YP_855825.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;product=sodium-dependent symporter family protein;protein_id=YP_855825.1;transl_table=11
NC_008570.1	RefSeq	gene	1396442	1397308	.	-	.	ID=gene1283;Dbxref=GeneID:4490718;Name=AHA_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1285
NC_008570.1	RefSeq	CDS	1396442	1397308	.	-	0	ID=cds1242;Parent=gene1283;Dbxref=Genbank:YP_855826.1,GeneID:4490718;Name=YP_855826.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_855826.1;transl_table=11
NC_008570.1	RefSeq	gene	1397342	1398895	.	-	.	ID=gene1284;Dbxref=GeneID:4490719;Name=AHA_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1286
NC_008570.1	RefSeq	CDS	1397342	1398895	.	-	0	ID=cds1243;Parent=gene1284;Dbxref=Genbank:YP_855827.1,GeneID:4490719;Name=YP_855827.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM PF02743%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_855827.1;transl_table=11
NC_008570.1	RefSeq	gene	1399092	1400153	.	+	.	ID=gene1285;Dbxref=GeneID:4490720;Name=AHA_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1287
NC_008570.1	RefSeq	CDS	1399092	1400153	.	+	0	ID=cds1244;Parent=gene1285;Dbxref=Genbank:YP_855828.1,GeneID:4490720;Name=YP_855828.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_855828.1;transl_table=11
NC_008570.1	RefSeq	gene	1400153	1403272	.	+	.	ID=gene1286;Dbxref=GeneID:4490721;Name=AHA_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1288
NC_008570.1	RefSeq	CDS	1400153	1403272	.	+	0	ID=cds1245;Parent=gene1286;Dbxref=Genbank:YP_855829.1,GeneID:4490721;Name=YP_855829.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=AcrB/AcrD/AcrF family protein;protein_id=YP_855829.1;transl_table=11
NC_008570.1	RefSeq	gene	1403366	1403734	.	+	.	ID=gene1287;Dbxref=GeneID:4490722;Name=AHA_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1289
NC_008570.1	RefSeq	CDS	1403366	1403734	.	+	0	ID=cds1246;Parent=gene1287;Dbxref=Genbank:YP_855830.1,GeneID:4490722;Name=YP_855830.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855830.1;transl_table=11
NC_008570.1	RefSeq	gene	1403872	1406280	.	+	.	ID=gene1288;Dbxref=GeneID:4490723;Name=AHA_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1290
NC_008570.1	RefSeq	CDS	1403872	1406280	.	+	0	ID=cds1247;Parent=gene1288;Dbxref=Genbank:YP_855831.1,GeneID:4490723;Name=YP_855831.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM protein;protein_id=YP_855831.1;transl_table=11
NC_008570.1	RefSeq	gene	1406570	1407529	.	-	.	ID=gene1289;Dbxref=GeneID:4490724;Name=AHA_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1291
NC_008570.1	RefSeq	CDS	1406570	1407529	.	-	0	ID=cds1248;Parent=gene1289;Dbxref=Genbank:YP_855832.1,GeneID:4490724;Name=YP_855832.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855832.1;transl_table=11
NC_008570.1	RefSeq	gene	1407548	1408483	.	-	.	ID=gene1290;Dbxref=GeneID:4490725;Name=AHA_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1292
NC_008570.1	RefSeq	CDS	1407548	1408483	.	-	0	ID=cds1249;Parent=gene1290;Dbxref=Genbank:YP_855833.1,GeneID:4490725;Name=YP_855833.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855833.1;transl_table=11
NC_008570.1	RefSeq	gene	1408883	1409230	.	+	.	ID=gene1291;Dbxref=GeneID:4487381;Name=AHA_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1293
NC_008570.1	RefSeq	CDS	1408883	1409230	.	+	0	ID=cds1250;Parent=gene1291;Dbxref=Genbank:YP_855834.1,GeneID:4487381;Name=YP_855834.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855834.1;transl_table=11
NC_008570.1	RefSeq	gene	1409232	1410272	.	-	.	ID=gene1292;Dbxref=GeneID:4487382;Name=AHA_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1294
NC_008570.1	RefSeq	CDS	1409232	1410272	.	-	0	ID=cds1251;Parent=gene1292;Dbxref=Genbank:YP_855835.1,GeneID:4487382;Name=YP_855835.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_855835.1;transl_table=11
NC_008570.1	RefSeq	gene	1410464	1410805	.	+	.	ID=gene1293;Dbxref=GeneID:4487383;Name=AHA_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1295
NC_008570.1	RefSeq	CDS	1410464	1410805	.	+	0	ID=cds1252;Parent=gene1293;Dbxref=Genbank:YP_855836.1,GeneID:4487383;Name=YP_855836.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;product=inner membrane protein YhaI;protein_id=YP_855836.1;transl_table=11
NC_008570.1	RefSeq	gene	1410802	1411284	.	+	.	ID=gene1294;Dbxref=GeneID:4487384;Name=AHA_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1296
NC_008570.1	RefSeq	CDS	1410802	1411284	.	+	0	ID=cds1253;Parent=gene1294;Dbxref=Genbank:YP_855837.1,GeneID:4487384;Name=YP_855837.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855837.1;transl_table=11
NC_008570.1	RefSeq	gene	1411303	1411725	.	+	.	ID=gene1295;Dbxref=GeneID:4487385;Name=AHA_1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1298
NC_008570.1	RefSeq	CDS	1411303	1411725	.	+	0	ID=cds1254;Parent=gene1295;Dbxref=Genbank:YP_855838.1,GeneID:4487385;Name=YP_855838.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855838.1;transl_table=11
NC_008570.1	RefSeq	gene	1411339	1411773	.	-	.	ID=gene1296;Dbxref=GeneID:4487386;Name=AHA_1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1297
NC_008570.1	RefSeq	CDS	1411339	1411773	.	-	0	ID=cds1255;Parent=gene1296;Dbxref=Genbank:YP_855839.1,GeneID:4487386;Name=YP_855839.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855839.1;transl_table=11
NC_008570.1	RefSeq	gene	1411770	1412303	.	-	.	ID=gene1297;Dbxref=GeneID:4487387;Name=AHA_1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1299
NC_008570.1	RefSeq	CDS	1411770	1412303	.	-	0	ID=cds1256;Parent=gene1297;Dbxref=Genbank:YP_855840.1,GeneID:4487387;Name=YP_855840.1;Note=identified by match to protein family HMM PF05163;gbkey=CDS;product=DinB family protein;protein_id=YP_855840.1;transl_table=11
NC_008570.1	RefSeq	gene	1412491	1413399	.	+	.	ID=gene1298;Dbxref=GeneID:4487388;Name=AHA_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1300
NC_008570.1	RefSeq	CDS	1412491	1413399	.	+	0	ID=cds1257;Parent=gene1298;Dbxref=Genbank:YP_855841.1,GeneID:4487388;Name=YP_855841.1;Note=identified by match to protein family HMM PF01408;gbkey=CDS;product=Gfo/Idh/MocA family oxidoreductase;protein_id=YP_855841.1;transl_table=11
NC_008570.1	RefSeq	gene	1413664	1414185	.	+	.	ID=gene1299;Dbxref=GeneID:4487389;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AHA_1301
NC_008570.1	RefSeq	CDS	1413664	1414185	.	+	0	ID=cds1258;Parent=gene1299;Dbxref=Genbank:YP_855842.1,GeneID:4487389;Name=YP_855842.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=Holliday junction resolvase;protein_id=YP_855842.1;transl_table=11
NC_008570.1	RefSeq	gene	1414508	1415194	.	+	.	ID=gene1300;Dbxref=GeneID:4487390;Name=AHA_1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1302
NC_008570.1	RefSeq	CDS	1414508	1415194	.	+	0	ID=cds1259;Parent=gene1300;Dbxref=Genbank:YP_855843.1,GeneID:4487390;Name=YP_855843.1;Note=porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure;gbkey=CDS;product=aquaporin Z;protein_id=YP_855843.1;transl_table=11
NC_008570.1	RefSeq	gene	1415318	1416061	.	-	.	ID=gene1301;Dbxref=GeneID:4487391;Name=AHA_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1303
NC_008570.1	RefSeq	CDS	1415318	1416061	.	-	0	ID=cds1260;Parent=gene1301;Dbxref=Genbank:YP_855844.1,GeneID:4487391;Name=YP_855844.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=transglycosylase;protein_id=YP_855844.1;transl_table=11
NC_008570.1	RefSeq	gene	1416240	1417601	.	-	.	ID=gene1302;Dbxref=GeneID:4487392;Name=AHA_1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1304
NC_008570.1	RefSeq	CDS	1416240	1417601	.	-	0	ID=cds1261;Parent=gene1302;Dbxref=Genbank:YP_855845.1,GeneID:4487392;Name=YP_855845.1;Note=identified by similarity to SP:P22630%3B match to protein family HMM PF00128;gbkey=CDS;product=alpha-amylase;protein_id=YP_855845.1;transl_table=11
NC_008570.1	RefSeq	gene	1417832	1418995	.	-	.	ID=gene1303;Dbxref=GeneID:4487393;Name=AHA_1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1305
NC_008570.1	RefSeq	CDS	1417832	1418995	.	-	0	ID=cds1262;Parent=gene1303;Dbxref=Genbank:YP_855846.1,GeneID:4487393;Name=YP_855846.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=protease LasA;protein_id=YP_855846.1;transl_table=11
NC_008570.1	RefSeq	gene	1419424	1419903	.	+	.	ID=gene1304;Dbxref=GeneID:4487394;Name=AHA_1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1306
NC_008570.1	RefSeq	CDS	1419424	1419903	.	+	0	ID=cds1263;Parent=gene1304;Dbxref=Genbank:YP_855847.1,GeneID:4487394;Name=YP_855847.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855847.1;transl_table=11
NC_008570.1	RefSeq	gene	1419908	1420516	.	-	.	ID=gene1305;Dbxref=GeneID:4487395;Name=AHA_1307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1307
NC_008570.1	RefSeq	CDS	1419908	1420516	.	-	0	ID=cds1264;Parent=gene1305;Dbxref=Genbank:YP_855848.1,GeneID:4487395;Name=YP_855848.1;Note=identified by match to protein family HMM PF07273;gbkey=CDS;product=hypothetical protein;protein_id=YP_855848.1;transl_table=11
NC_008570.1	RefSeq	gene	1420548	1422029	.	+	.	ID=gene1306;Dbxref=GeneID:4487396;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AHA_1308
NC_008570.1	RefSeq	CDS	1420548	1422029	.	+	0	ID=cds1265;Parent=gene1306;Dbxref=Genbank:YP_855849.1,GeneID:4487396;Name=YP_855849.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=YP_855849.1;transl_table=11
NC_008570.1	RefSeq	gene	1422125	1423387	.	+	.	ID=gene1307;Dbxref=GeneID:4487397;Name=AHA_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1309
NC_008570.1	RefSeq	CDS	1422125	1423387	.	+	0	ID=cds1266;Parent=gene1307;Dbxref=Genbank:YP_855850.1,GeneID:4487397;Name=YP_855850.1;gbkey=CDS;product=lipoprotein;protein_id=YP_855850.1;transl_table=11
NC_008570.1	RefSeq	gene	1423457	1424293	.	-	.	ID=gene1308;Dbxref=GeneID:4487398;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AHA_1310
NC_008570.1	RefSeq	CDS	1423457	1424293	.	-	0	ID=cds1267;Parent=gene1308;Dbxref=Genbank:YP_855851.1,GeneID:4487398;Name=YP_855851.1;Note=produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis%3B has a role in one-carbon metabolism%3B forms a homohexamer%3B activated by methionine and inhibited by glycine;gbkey=CDS;gene=purU;product=formyltetrahydrofolate deformylase;protein_id=YP_855851.1;transl_table=11
NC_008570.1	RefSeq	gene	1424752	1425405	.	+	.	ID=gene1309;Dbxref=GeneID:4487399;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AHA_1311
NC_008570.1	RefSeq	CDS	1424752	1425405	.	+	0	ID=cds1268;Parent=gene1309;Dbxref=Genbank:YP_855852.1,GeneID:4487399;Name=YP_855852.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=YP_855852.1;transl_table=11
NC_008570.1	RefSeq	gene	1426013	1426861	.	-	.	ID=gene1310;Dbxref=GeneID:4487400;Name=AHA_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1312
NC_008570.1	RefSeq	CDS	1426013	1426861	.	-	0	ID=cds1269;Parent=gene1310;Dbxref=Genbank:YP_855853.1,GeneID:4487400;Name=YP_855853.1;Note=identified by match to protein family HMM PF00085;gbkey=CDS;product=thioredoxin domain-containing protein;protein_id=YP_855853.1;transl_table=11
NC_008570.1	RefSeq	gene	1426858	1427580	.	-	.	ID=gene1311;Dbxref=GeneID:4488443;Name=AHA_1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1313
NC_008570.1	RefSeq	CDS	1426858	1427580	.	-	0	ID=cds1270;Parent=gene1311;Dbxref=Genbank:YP_855854.1,GeneID:4488443;Name=YP_855854.1;Note=identified by match to protein family HMM PF01648;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=YP_855854.1;transl_table=11
NC_008570.1	RefSeq	gene	1427844	1428344	.	+	.	ID=gene1312;Dbxref=GeneID:4488444;Name=AHA_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1314
NC_008570.1	RefSeq	CDS	1427844	1428344	.	+	0	ID=cds1271;Parent=gene1312;Dbxref=Genbank:YP_855855.1,GeneID:4488444;Name=YP_855855.1;Note=identified by match to protein family HMM PF00877;gbkey=CDS;product=protein NlpC;protein_id=YP_855855.1;transl_table=11
NC_008570.1	RefSeq	gene	1428493	1429449	.	+	.	ID=gene1313;Dbxref=GeneID:4488445;Name=AHA_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1315
NC_008570.1	RefSeq	CDS	1428493	1429449	.	+	0	ID=cds1272;Parent=gene1313;Dbxref=Genbank:YP_855856.1,GeneID:4488445;Name=YP_855856.1;Note=identified by match to protein family HMM PF05971;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=YP_855856.1;transl_table=11
NC_008570.1	RefSeq	gene	1429721	1430440	.	+	.	ID=gene1314;Dbxref=GeneID:4488446;Name=AHA_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1316
NC_008570.1	RefSeq	CDS	1429721	1430440	.	+	0	ID=cds1273;Parent=gene1314;Dbxref=Genbank:YP_855857.1,GeneID:4488446;Name=YP_855857.1;Note=identified by match to protein family HMM PF01575;gbkey=CDS;product=nodulation protein N;protein_id=YP_855857.1;transl_table=11
NC_008570.1	RefSeq	gene	1430588	1431586	.	-	.	ID=gene1315;Dbxref=GeneID:4488447;Name=AHA_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1317
NC_008570.1	RefSeq	CDS	1430588	1431586	.	-	0	ID=cds1274;Parent=gene1315;Dbxref=Genbank:YP_855858.1,GeneID:4488447;Name=YP_855858.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855858.1;transl_table=11
NC_008570.1	RefSeq	gene	1431614	1432531	.	-	.	ID=gene1316;Dbxref=GeneID:4488448;Name=AHA_1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1318
NC_008570.1	RefSeq	CDS	1431614	1432531	.	-	0	ID=cds1275;Parent=gene1316;Dbxref=Genbank:YP_855859.1,GeneID:4488448;Name=YP_855859.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF03734;gbkey=CDS;product=LysM domain-containing protein;protein_id=YP_855859.1;transl_table=11
NC_008570.1	RefSeq	gene	1432952	1433041	.	+	.	ID=gene1317;Dbxref=GeneID:4488449;Name=AHA_1319;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1319
NC_008570.1	RefSeq	tRNA	1432952	1433041	.	+	.	ID=rna40;Parent=gene1317;Dbxref=GeneID:4488449;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	1432952	1433041	.	+	.	ID=id41;Parent=rna40;Dbxref=GeneID:4488449;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	1433179	1436307	.	-	.	ID=gene1318;Dbxref=GeneID:4488450;Name=AHA_1320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1320
NC_008570.1	RefSeq	CDS	1433179	1436307	.	-	0	ID=cds1276;Parent=gene1318;Dbxref=Genbank:YP_855860.1,GeneID:4488450;Name=YP_855860.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915;gbkey=CDS;product=transporter AmrB;protein_id=YP_855860.1;transl_table=11
NC_008570.1	RefSeq	gene	1436323	1437678	.	-	.	ID=gene1319;Dbxref=GeneID:4488451;Name=AHA_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1321
NC_008570.1	RefSeq	CDS	1436323	1437678	.	-	0	ID=cds1277;Parent=gene1319;Dbxref=Genbank:YP_855861.1,GeneID:4488451;Name=YP_855861.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=acriflavin resistance protein A;protein_id=YP_855861.1;transl_table=11
NC_008570.1	RefSeq	gene	1437636	1438364	.	+	.	ID=gene1320;Dbxref=GeneID:4488452;Name=AHA_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1322
NC_008570.1	RefSeq	CDS	1437636	1438364	.	+	0	ID=cds1278;Parent=gene1320;Dbxref=Genbank:YP_855862.1,GeneID:4488452;Name=YP_855862.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=two-component response regulator;protein_id=YP_855862.1;transl_table=11
NC_008570.1	RefSeq	gene	1438361	1439419	.	+	.	ID=gene1321;Dbxref=GeneID:4488453;Name=AHA_1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1323
NC_008570.1	RefSeq	CDS	1438361	1439419	.	+	0	ID=cds1279;Parent=gene1321;Dbxref=Genbank:YP_855863.1,GeneID:4488453;Name=YP_855863.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_855863.1;transl_table=11
NC_008570.1	RefSeq	gene	1439669	1439998	.	-	.	ID=gene1322;Dbxref=GeneID:4488454;Name=AHA_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1324
NC_008570.1	RefSeq	CDS	1439669	1439998	.	-	0	ID=cds1280;Parent=gene1322;Dbxref=Genbank:YP_855864.1,GeneID:4488454;Name=YP_855864.1;Note=identified by match to protein family HMM PF00893;gbkey=CDS;product=quaternary ammonium compound-resistance protein QacE;protein_id=YP_855864.1;transl_table=11
NC_008570.1	RefSeq	gene	1440017	1440430	.	-	.	ID=gene1323;Dbxref=GeneID:4488455;Name=AHA_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1325
NC_008570.1	RefSeq	CDS	1440017	1440430	.	-	0	ID=cds1281;Parent=gene1323;Dbxref=Genbank:YP_855865.1,GeneID:4488455;Name=YP_855865.1;Note=identified by match to protein family HMM PF00893;gbkey=CDS;product=quaternary ammonium compound-resistance protein QacE;protein_id=YP_855865.1;transl_table=11
NC_008570.1	RefSeq	gene	1440450	1441142	.	-	.	ID=gene1324;Dbxref=GeneID:4488456;Name=AHA_1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1326
NC_008570.1	RefSeq	CDS	1440450	1441142	.	-	0	ID=cds1282;Parent=gene1324;Dbxref=Genbank:YP_855866.1,GeneID:4488456;Name=YP_855866.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855866.1;transl_table=11
NC_008570.1	RefSeq	gene	1441154	1441774	.	-	.	ID=gene1325;Dbxref=GeneID:4488457;Name=AHA_1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1327
NC_008570.1	RefSeq	CDS	1441154	1441774	.	-	0	ID=cds1283;Parent=gene1325;Dbxref=Genbank:YP_855867.1,GeneID:4488457;Name=YP_855867.1;Note=identified by match to protein family HMM PF06130;gbkey=CDS;product=propanediol utilization;protein_id=YP_855867.1;transl_table=11
NC_008570.1	RefSeq	gene	1441771	1442223	.	-	.	ID=gene1326;Dbxref=GeneID:4488458;Name=AHA_1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1328
NC_008570.1	RefSeq	CDS	1441771	1442223	.	-	0	ID=cds1284;Parent=gene1326;Dbxref=Genbank:YP_855868.1,GeneID:4488458;Name=YP_855868.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;product=hypothetical protein;protein_id=YP_855868.1;transl_table=11
NC_008570.1	RefSeq	gene	1442236	1443222	.	-	.	ID=gene1327;Dbxref=GeneID:4488459;Name=AHA_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1329
NC_008570.1	RefSeq	CDS	1442236	1443222	.	-	0	ID=cds1285;Parent=gene1327;Dbxref=Genbank:YP_855869.1,GeneID:4488459;Name=YP_855869.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;product=benzylsuccinate synthase activating enzyme;protein_id=YP_855869.1;transl_table=11
NC_008570.1	RefSeq	gene	1443297	1445678	.	-	.	ID=gene1328;Dbxref=GeneID:4488460;Name=AHA_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1330
NC_008570.1	RefSeq	CDS	1443297	1445678	.	-	0	ID=cds1286;Parent=gene1328;Dbxref=Genbank:YP_855870.1,GeneID:4488460;Name=YP_855870.1;Note=identified by similarity to SP:P32674%3B match to protein family HMM PF01228%3B match to protein family HMM PF02901;gbkey=CDS;product=pyruvate formate-lyase;protein_id=YP_855870.1;transl_table=11
NC_008570.1	RefSeq	gene	1446709	1447863	.	-	.	ID=gene1329;Dbxref=GeneID:4488461;Name=AHA_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1331
NC_008570.1	RefSeq	CDS	1446709	1447863	.	-	0	ID=cds1287;Parent=gene1329;Dbxref=Genbank:YP_855871.1,GeneID:4488461;Name=YP_855871.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_855871.1;transl_table=11
NC_008570.1	RefSeq	gene	1447879	1448136	.	-	.	ID=gene1330;Dbxref=GeneID:4487890;Name=AHA_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1332
NC_008570.1	RefSeq	CDS	1447879	1448136	.	-	0	ID=cds1288;Parent=gene1330;Dbxref=Genbank:YP_855872.1,GeneID:4487890;Name=YP_855872.1;Note=identified by match to protein family HMM PF03319;gbkey=CDS;product=ethanolamine utilization protein EutN/carboxysome structural protein Ccml;protein_id=YP_855872.1;transl_table=11
NC_008570.1	RefSeq	gene	1448163	1449728	.	-	.	ID=gene1331;Dbxref=GeneID:4487891;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AHA_1333
NC_008570.1	RefSeq	CDS	1448163	1449728	.	-	0	ID=cds1289;Parent=gene1331;Dbxref=Genbank:YP_855873.1,GeneID:4487891;Name=YP_855873.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR02518;gbkey=CDS;gene=eutE;product=acetaldehyde dehydrogenase;protein_id=YP_855873.1;transl_table=11
NC_008570.1	RefSeq	gene	1449803	1450081	.	-	.	ID=gene1332;Dbxref=GeneID:4487892;Name=AHA_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1334
NC_008570.1	RefSeq	CDS	1449803	1450081	.	-	0	ID=cds1290;Parent=gene1332;Dbxref=Genbank:YP_855874.1,GeneID:4487892;Name=YP_855874.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;product=ethanolamine utilization protein;protein_id=YP_855874.1;transl_table=11
NC_008570.1	RefSeq	gene	1450096	1450380	.	-	.	ID=gene1333;Dbxref=GeneID:4487893;Name=AHA_1335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1335
NC_008570.1	RefSeq	CDS	1450096	1450380	.	-	0	ID=cds1291;Parent=gene1333;Dbxref=Genbank:YP_855875.1,GeneID:4487893;Name=YP_855875.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;product=microcompartments family protein;protein_id=YP_855875.1;transl_table=11
NC_008570.1	RefSeq	gene	1450397	1450675	.	-	.	ID=gene1334;Dbxref=GeneID:4487894;Name=AHA_1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1336
NC_008570.1	RefSeq	CDS	1450397	1450675	.	-	0	ID=cds1292;Parent=gene1334;Dbxref=Genbank:YP_855876.1,GeneID:4487894;Name=YP_855876.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;product=microcompartments family protein;protein_id=YP_855876.1;transl_table=11
NC_008570.1	RefSeq	gene	1451360	1451911	.	-	.	ID=gene1335;Dbxref=GeneID:4487895;Name=AHA_1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1337
NC_008570.1	RefSeq	CDS	1451360	1451911	.	-	0	ID=cds1293;Parent=gene1335;Dbxref=Genbank:YP_855877.1,GeneID:4487895;Name=YP_855877.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855877.1;transl_table=11
NC_008570.1	RefSeq	gene	1451875	1452684	.	-	.	ID=gene1336;Dbxref=GeneID:4487896;Name=AHA_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1338
NC_008570.1	RefSeq	CDS	1451875	1452684	.	-	0	ID=cds1294;Parent=gene1336;Dbxref=Genbank:YP_855878.1,GeneID:4487896;Name=YP_855878.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein%2C C terminal;protein_id=YP_855878.1;transl_table=11
NC_008570.1	RefSeq	gene	1452706	1453311	.	-	.	ID=gene1337;Dbxref=GeneID:4487897;Name=AHA_1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1339
NC_008570.1	RefSeq	CDS	1452706	1453311	.	-	0	ID=cds1295;Parent=gene1337;Dbxref=Genbank:YP_855879.1,GeneID:4487897;Name=YP_855879.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_855879.1;transl_table=11
NC_008570.1	RefSeq	gene	1453693	1454607	.	-	.	ID=gene1338;Dbxref=GeneID:4487898;Name=AHA_1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1340
NC_008570.1	RefSeq	CDS	1453693	1454607	.	-	0	ID=cds1296;Parent=gene1338;Dbxref=Genbank:YP_855880.1,GeneID:4487898;Name=YP_855880.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_855880.1;transl_table=11
NC_008570.1	RefSeq	gene	1454723	1455553	.	+	.	ID=gene1339;Dbxref=GeneID:4487899;Name=fdhD-1;gbkey=Gene;gene=fdhD-1;gene_biotype=protein_coding;locus_tag=AHA_1341
NC_008570.1	RefSeq	CDS	1454723	1455553	.	+	0	ID=cds1297;Parent=gene1339;Dbxref=Genbank:YP_855881.1,GeneID:4487899;Name=YP_855881.1;Note=identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129;gbkey=CDS;gene=fdhD-1;product=formate dehydrogenase family accessory protein FdhD;protein_id=YP_855881.1;transl_table=11
NC_008570.1	RefSeq	gene	1455540	1457828	.	+	.	ID=gene1340;Dbxref=GeneID:4487900;Name=AHA_1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1342
NC_008570.1	RefSeq	CDS	1455540	1457828	.	+	0	ID=cds1298;Parent=gene1340;Dbxref=Genbank:YP_855882.1,GeneID:4487900;Name=YP_855882.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR01701;gbkey=CDS;product=oxidoreductase alpha (molybdopterin) subunit;protein_id=YP_855882.1;transl_table=11
NC_008570.1	RefSeq	gene	1457945	1458020	.	-	.	ID=gene1341;Dbxref=GeneID:4487901;Name=AHA_1343;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1343
NC_008570.1	RefSeq	tRNA	1457945	1458020	.	-	.	ID=rna41;Parent=gene1341;Dbxref=GeneID:4487901;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	exon	1457945	1458020	.	-	.	ID=id42;Parent=rna41;Dbxref=GeneID:4487901;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	gene	1458106	1458846	.	-	.	ID=gene1342;Dbxref=GeneID:4487902;Name=AHA_1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1344
NC_008570.1	RefSeq	CDS	1458106	1458846	.	-	0	ID=cds1299;Parent=gene1342;Dbxref=Genbank:YP_855883.1,GeneID:4487902;Name=YP_855883.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=hydrolase;protein_id=YP_855883.1;transl_table=11
NC_008570.1	RefSeq	gene	1459315	1459968	.	+	.	ID=gene1343;Dbxref=GeneID:4487903;Name=AHA_1345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1345
NC_008570.1	RefSeq	CDS	1459315	1459968	.	+	0	ID=cds1300;Parent=gene1343;Dbxref=Genbank:YP_855884.1,GeneID:4487903;Name=YP_855884.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=PsrA protein;protein_id=YP_855884.1;transl_table=11
NC_008570.1	RefSeq	gene	1460017	1462341	.	+	.	ID=gene1344;Dbxref=GeneID:4487904;Name=AHA_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1346
NC_008570.1	RefSeq	CDS	1460017	1462341	.	+	0	ID=cds1301;Parent=gene1344;Dbxref=Genbank:YP_855885.1,GeneID:4487904;Name=YP_855885.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_855885.1;transl_table=11
NC_008570.1	RefSeq	gene	1462512	1465574	.	+	.	ID=gene1345;Dbxref=GeneID:4487905;Name=AHA_1347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1347
NC_008570.1	RefSeq	CDS	1462512	1465574	.	+	0	ID=cds1302;Parent=gene1345;Dbxref=Genbank:YP_855886.1,GeneID:4487905;Name=YP_855886.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=AcrB/AcrD/AcrF family protein;protein_id=YP_855886.1;transl_table=11
NC_008570.1	RefSeq	gene	1465590	1466636	.	+	.	ID=gene1346;Dbxref=GeneID:4487906;Name=AHA_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1348
NC_008570.1	RefSeq	CDS	1465590	1466636	.	+	0	ID=cds1303;Parent=gene1346;Dbxref=Genbank:YP_855887.1,GeneID:4487906;Name=YP_855887.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;product=RND family efflux transporter MFP subunit;protein_id=YP_855887.1;transl_table=11
NC_008570.1	RefSeq	gene	1466702	1468141	.	-	.	ID=gene1347;Dbxref=GeneID:4487907;Name=pyk-2;gbkey=Gene;gene=pyk-2;gene_biotype=protein_coding;locus_tag=AHA_1349
NC_008570.1	RefSeq	CDS	1466702	1468141	.	-	0	ID=cds1304;Parent=gene1347;Dbxref=Genbank:YP_855888.1,GeneID:4487907;Name=YP_855888.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk-2;product=pyruvate kinase;protein_id=YP_855888.1;transl_table=11
NC_008570.1	RefSeq	gene	1468305	1469168	.	-	.	ID=gene1348;Dbxref=GeneID:4487908;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;locus_tag=AHA_1350
NC_008570.1	RefSeq	CDS	1468305	1469168	.	-	0	ID=cds1305;Parent=gene1348;Dbxref=Genbank:YP_855889.1,GeneID:4487908;Name=YP_855889.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;gene=hexR;product=DNA-binding transcriptional regulator HexR;protein_id=YP_855889.1;transl_table=11
NC_008570.1	RefSeq	gene	1469509	1470477	.	+	.	ID=gene1349;Dbxref=GeneID:4487909;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AHA_1351
NC_008570.1	RefSeq	CDS	1469509	1470477	.	+	0	ID=cds1306;Parent=gene1349;Dbxref=Genbank:YP_855890.1,GeneID:4487909;Name=YP_855890.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=YP_855890.1;transl_table=11
NC_008570.1	RefSeq	gene	1470777	1472135	.	-	.	ID=gene1350;Dbxref=GeneID:4489061;Name=AHA_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1352
NC_008570.1	RefSeq	CDS	1470777	1472135	.	-	0	ID=cds1307;Parent=gene1350;Dbxref=Genbank:YP_855891.1,GeneID:4489061;Name=YP_855891.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor protein PhoQ;protein_id=YP_855891.1;transl_table=11
NC_008570.1	RefSeq	gene	1472159	1472866	.	-	.	ID=gene1351;Dbxref=GeneID:4489062;Name=AHA_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1353
NC_008570.1	RefSeq	CDS	1472159	1472866	.	-	0	ID=cds1308;Parent=gene1351;Dbxref=Genbank:YP_855892.1,GeneID:4489062;Name=YP_855892.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein PhoP;protein_id=YP_855892.1;transl_table=11
NC_008570.1	RefSeq	gene	1472972	1475131	.	-	.	ID=gene1352;Dbxref=GeneID:4489063;Name=AHA_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1354
NC_008570.1	RefSeq	CDS	1472972	1475131	.	-	0	ID=cds1309;Parent=gene1352;Dbxref=Genbank:YP_855893.1,GeneID:4489063;Name=YP_855893.1;Note=identified by similarity to GB:AAF94603.1%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR01846;gbkey=CDS;product=RTX toxin transporter;protein_id=YP_855893.1;transl_table=11
NC_008570.1	RefSeq	gene	1475134	1476498	.	-	.	ID=gene1353;Dbxref=GeneID:4489064;Name=rtxD;gbkey=Gene;gene=rtxD;gene_biotype=protein_coding;locus_tag=AHA_1355
NC_008570.1	RefSeq	CDS	1475134	1476498	.	-	0	ID=cds1310;Parent=gene1353;Dbxref=Genbank:YP_855894.1,GeneID:4489064;Name=YP_855894.1;Note=identified by similarity to GB:AAD21060.1%3B match to protein family HMM PF00529%3B match to protein family HMM TIGR01843;gbkey=CDS;gene=rtxD;product=RTX toxin transporter;protein_id=YP_855894.1;transl_table=11
NC_008570.1	RefSeq	gene	1476495	1478582	.	-	.	ID=gene1354;Dbxref=GeneID:4489065;Name=rtxB;gbkey=Gene;gene=rtxB;gene_biotype=protein_coding;locus_tag=AHA_1356
NC_008570.1	RefSeq	CDS	1476495	1478582	.	-	0	ID=cds1311;Parent=gene1354;Dbxref=Genbank:YP_855895.1,GeneID:4489065;Name=YP_855895.1;Note=identified by similarity to GB:AAD21059.1%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR01846;gbkey=CDS;gene=rtxB;product=RTX toxin transporter;protein_id=YP_855895.1;transl_table=11
NC_008570.1	RefSeq	gene	1478891	1479289	.	+	.	ID=gene1355;Dbxref=GeneID:4489066;Name=AHA_1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1357
NC_008570.1	RefSeq	CDS	1478891	1479289	.	+	0	ID=cds1312;Parent=gene1355;Dbxref=Genbank:YP_855896.1,GeneID:4489066;Name=YP_855896.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855896.1;transl_table=11
NC_008570.1	RefSeq	gene	1479322	1479771	.	+	.	ID=gene1356;Dbxref=GeneID:4489067;Name=rtxC;gbkey=Gene;gene=rtxC;gene_biotype=protein_coding;locus_tag=AHA_1358
NC_008570.1	RefSeq	CDS	1479322	1479771	.	+	0	ID=cds1313;Parent=gene1356;Dbxref=Genbank:YP_855897.1,GeneID:4489067;Name=YP_855897.1;Note=identified by similarity to SP:Q9X4W3%3B match to protein family HMM PF02794;gbkey=CDS;gene=rtxC;product=cytolysin-activating lysine-acyltransferase RtxC;protein_id=YP_855897.1;transl_table=11
NC_008570.1	RefSeq	gene	1479789	1493846	.	+	.	ID=gene1357;Dbxref=GeneID:4489068;Name=AHA_1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1359
NC_008570.1	RefSeq	CDS	1479789	1493846	.	+	0	ID=cds1314;Parent=gene1357;Dbxref=Genbank:YP_855898.1,GeneID:4489068;Name=YP_855898.1;Note=identified by similarity to GB:AAD21057.1%3B match to protein family HMM PF02018;gbkey=CDS;product=structural toxin protein RtxA;protein_id=YP_855898.1;transl_table=11
NC_008570.1	RefSeq	gene	1494201	1494695	.	+	.	ID=gene1358;Dbxref=GeneID:4489069;Name=AHA_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1360
NC_008570.1	RefSeq	CDS	1494201	1494695	.	+	0	ID=cds1315;Parent=gene1358;Dbxref=Genbank:YP_855899.1,GeneID:4489069;Name=YP_855899.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855899.1;transl_table=11
NC_008570.1	RefSeq	gene	1494796	1496124	.	-	.	ID=gene1359;Dbxref=GeneID:4489070;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AHA_1361
NC_008570.1	RefSeq	CDS	1494796	1496124	.	-	0	ID=cds1316;Parent=gene1359;Dbxref=Genbank:YP_855900.1,GeneID:4489070;Name=YP_855900.1;Note=catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit;gbkey=CDS;gene=rimO;product=ribosomal protein S12 methylthiotransferase;protein_id=YP_855900.1;transl_table=11
NC_008570.1	RefSeq	gene	1496176	1497486	.	+	.	ID=gene1360;Dbxref=GeneID:4489071;Name=AHA_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1362
NC_008570.1	RefSeq	CDS	1496176	1497486	.	+	0	ID=cds1317;Parent=gene1360;Dbxref=Genbank:YP_855901.1,GeneID:4489071;Name=YP_855901.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=response regulator;protein_id=YP_855901.1;transl_table=11
NC_008570.1	RefSeq	gene	1497715	1498491	.	+	.	ID=gene1361;Dbxref=GeneID:4489072;Name=AHA_1363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1363
NC_008570.1	RefSeq	CDS	1497715	1498491	.	+	0	ID=cds1318;Parent=gene1361;Dbxref=Genbank:YP_855902.1,GeneID:4489072;Name=YP_855902.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855902.1;transl_table=11
NC_008570.1	RefSeq	gene	1498693	1499010	.	+	.	ID=gene1362;Dbxref=GeneID:4489073;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AHA_1364
NC_008570.1	RefSeq	CDS	1498693	1499010	.	+	0	ID=cds1319;Parent=gene1362;Dbxref=Genbank:YP_855903.1,GeneID:4489073;Name=YP_855903.1;Note=identified by match to protein family HMM PF02049%3B match to protein family HMM TIGR00205;gbkey=CDS;gene=fliE;product=flagellar hook-basal body complex protein FliE;protein_id=YP_855903.1;transl_table=11
NC_008570.1	RefSeq	gene	1499098	1500780	.	+	.	ID=gene1363;Dbxref=GeneID:4489074;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AHA_1365
NC_008570.1	RefSeq	CDS	1499098	1500780	.	+	0	ID=cds1320;Parent=gene1363;Dbxref=Genbank:YP_855904.1,GeneID:4489074;Name=YP_855904.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;gbkey=CDS;gene=fliF;product=flagellar MS-ring protein;protein_id=YP_855904.1;transl_table=11
NC_008570.1	RefSeq	gene	1500773	1501834	.	+	.	ID=gene1364;Dbxref=GeneID:4489075;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AHA_1366
NC_008570.1	RefSeq	CDS	1500773	1501834	.	+	0	ID=cds1321;Parent=gene1364;Dbxref=Genbank:YP_855905.1,GeneID:4489075;Name=YP_855905.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein G;protein_id=YP_855905.1;transl_table=11
NC_008570.1	RefSeq	gene	1501899	1502705	.	+	.	ID=gene1365;Dbxref=GeneID:4489076;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AHA_1367
NC_008570.1	RefSeq	CDS	1501899	1502705	.	+	0	ID=cds1322;Parent=gene1365;Dbxref=Genbank:YP_855906.1,GeneID:4489076;Name=YP_855906.1;Note=identified by match to protein family HMM PF02108;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=YP_855906.1;transl_table=11
NC_008570.1	RefSeq	gene	1502778	1504109	.	+	.	ID=gene1366;Dbxref=GeneID:4489077;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AHA_1368
NC_008570.1	RefSeq	CDS	1502778	1504109	.	+	0	ID=cds1323;Parent=gene1366;Dbxref=Genbank:YP_855907.1,GeneID:4489077;Name=YP_855907.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=YP_855907.1;transl_table=11
NC_008570.1	RefSeq	gene	1504136	1504576	.	+	.	ID=gene1367;Dbxref=GeneID:4489078;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AHA_1369
NC_008570.1	RefSeq	CDS	1504136	1504576	.	+	0	ID=cds1324;Parent=gene1367;Dbxref=Genbank:YP_855908.1,GeneID:4489078;Name=YP_855908.1;Note=identified by match to protein family HMM TIGR02473;gbkey=CDS;gene=fliJ;product=flagellar export protein FliJ;protein_id=YP_855908.1;transl_table=11
NC_008570.1	RefSeq	gene	1504806	1506689	.	+	.	ID=gene1368;Dbxref=GeneID:4489079;Name=AHA_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1370
NC_008570.1	RefSeq	CDS	1504806	1506689	.	+	0	ID=cds1325;Parent=gene1368;Dbxref=Genbank:YP_855909.1,GeneID:4489079;Name=YP_855909.1;Note=identified by similarity to GB:AAC33327.1%3B match to protein family HMM PF02120;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=YP_855909.1;transl_table=11
NC_008570.1	RefSeq	gene	1506747	1507265	.	+	.	ID=gene1369;Dbxref=GeneID:4486865;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AHA_1371
NC_008570.1	RefSeq	CDS	1506747	1507265	.	+	0	ID=cds1326;Parent=gene1369;Dbxref=Genbank:YP_855910.1,GeneID:4486865;Name=YP_855910.1;Note=interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body-associated protein FliL;protein_id=YP_855910.1;transl_table=11
NC_008570.1	RefSeq	gene	1507275	1508345	.	+	.	ID=gene1370;Dbxref=GeneID:4486866;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AHA_1372
NC_008570.1	RefSeq	CDS	1507275	1508345	.	+	0	ID=cds1327;Parent=gene1370;Dbxref=Genbank:YP_855911.1,GeneID:4486866;Name=YP_855911.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=YP_855911.1;transl_table=11
NC_008570.1	RefSeq	gene	1508397	1508789	.	+	.	ID=gene1371;Dbxref=GeneID:4486867;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AHA_1373
NC_008570.1	RefSeq	CDS	1508397	1508789	.	+	0	ID=cds1328;Parent=gene1371;Dbxref=Genbank:YP_855912.1,GeneID:4486867;Name=YP_855912.1;Note=identified by match to protein family HMM PF01052%3B match to protein family HMM TIGR02480;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=YP_855912.1;transl_table=11
NC_008570.1	RefSeq	gene	1508786	1509169	.	+	.	ID=gene1372;Dbxref=GeneID:4486868;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AHA_1374
NC_008570.1	RefSeq	CDS	1508786	1509169	.	+	0	ID=cds1329;Parent=gene1372;Dbxref=Genbank:YP_855913.1,GeneID:4486868;Name=YP_855913.1;Note=identified by similarity to SP:Q51467%3B match to protein family HMM PF04347;gbkey=CDS;gene=fliO;product=flagellar biosynthesis protein%2C FliO;protein_id=YP_855913.1;transl_table=11
NC_008570.1	RefSeq	gene	1509156	1509935	.	+	.	ID=gene1373;Dbxref=GeneID:4486869;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AHA_1375
NC_008570.1	RefSeq	CDS	1509156	1509935	.	+	0	ID=cds1330;Parent=gene1373;Dbxref=Genbank:YP_855914.1,GeneID:4486869;Name=YP_855914.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=YP_855914.1;transl_table=11
NC_008570.1	RefSeq	gene	1509963	1510232	.	+	.	ID=gene1374;Dbxref=GeneID:4486870;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AHA_1376
NC_008570.1	RefSeq	CDS	1509963	1510232	.	+	0	ID=cds1331;Parent=gene1374;Dbxref=Genbank:YP_855915.1,GeneID:4486870;Name=YP_855915.1;Note=identified by similarity to SP:P34201%3B match to protein family HMM PF01313%3B match to protein family HMM TIGR01402;gbkey=CDS;gene=fliQ;product=flagellar biosynthetic protein FliQ;protein_id=YP_855915.1;transl_table=11
NC_008570.1	RefSeq	gene	1510300	1511091	.	+	.	ID=gene1375;Dbxref=GeneID:4486871;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AHA_1377
NC_008570.1	RefSeq	CDS	1510300	1511091	.	+	0	ID=cds1332;Parent=gene1375;Dbxref=Genbank:YP_855916.1,GeneID:4486871;Name=YP_855916.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=YP_855916.1;transl_table=11
NC_008570.1	RefSeq	gene	1511226	1512356	.	+	.	ID=gene1376;Dbxref=GeneID:4486872;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AHA_1378
NC_008570.1	RefSeq	CDS	1511226	1512356	.	+	0	ID=cds1333;Parent=gene1376;Dbxref=Genbank:YP_855917.1,GeneID:4486872;Name=YP_855917.1;Note=identified by similarity to GB:AAN56214.1%3B match to protein family HMM PF01312%3B match to protein family HMM TIGR00328;gbkey=CDS;gene=flhB;product=flagellar biosynthetic protein FlhB;protein_id=YP_855917.1;transl_table=11
NC_008570.1	RefSeq	gene	1512464	1514566	.	+	.	ID=gene1377;Dbxref=GeneID:4486873;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AHA_1379
NC_008570.1	RefSeq	CDS	1512464	1514566	.	+	0	ID=cds1334;Parent=gene1377;Dbxref=Genbank:YP_855918.1,GeneID:4486873;Name=YP_855918.1;Note=membrane protein involved in the flagellar export apparatus;gbkey=CDS;gene=flhA;product=flagellar biosynthesis protein FlhA;protein_id=YP_855918.1;transl_table=11
NC_008570.1	RefSeq	gene	1514583	1516004	.	+	.	ID=gene1378;Dbxref=GeneID:4486874;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=AHA_1380
NC_008570.1	RefSeq	CDS	1514583	1516004	.	+	0	ID=cds1335;Parent=gene1378;Dbxref=Genbank:YP_855919.1,GeneID:4486874;Name=YP_855919.1;Note=identified by similarity to GB:AAN03365.1%3B match to protein family HMM PF00448;gbkey=CDS;gene=flhF;product=flagellar biosynthesis protein FlhF;protein_id=YP_855919.1;transl_table=11
NC_008570.1	RefSeq	gene	1516012	1516881	.	+	.	ID=gene1379;Dbxref=GeneID:4486875;Name=AHA_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1381
NC_008570.1	RefSeq	CDS	1516012	1516881	.	+	0	ID=cds1336;Parent=gene1379;Dbxref=Genbank:YP_855920.1,GeneID:4486875;Name=YP_855920.1;Note=identified by similarity to GB:AAF32413.1%3B match to protein family HMM PF01656;gbkey=CDS;product=CobQ/CobB/MinD/ParA family protein;protein_id=YP_855920.1;transl_table=11
NC_008570.1	RefSeq	gene	1516874	1517593	.	+	.	ID=gene1380;Dbxref=GeneID:4486876;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AHA_1382
NC_008570.1	RefSeq	CDS	1516874	1517593	.	+	0	ID=cds1337;Parent=gene1380;Dbxref=Genbank:YP_855921.1,GeneID:4486876;Name=YP_855921.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=YP_855921.1;transl_table=11
NC_008570.1	RefSeq	gene	1517705	1518088	.	+	.	ID=gene1381;Dbxref=GeneID:4486877;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AHA_1383
NC_008570.1	RefSeq	CDS	1517705	1518088	.	+	0	ID=cds1338;Parent=gene1381;Dbxref=Genbank:YP_855922.1,GeneID:4486877;Name=YP_855922.1;Note=identified by similarity to SP:Q51455%3B match to protein family HMM PF00072;gbkey=CDS;gene=cheY;product=chemotaxis protein CheY;protein_id=YP_855922.1;transl_table=11
NC_008570.1	RefSeq	gene	1518101	1518841	.	+	.	ID=gene1382;Dbxref=GeneID:4486878;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AHA_1384
NC_008570.1	RefSeq	CDS	1518101	1518841	.	+	0	ID=cds1339;Parent=gene1382;Dbxref=Genbank:YP_855923.1,GeneID:4486878;Name=YP_855923.1;Note=identified by similarity to SP:Q51434%3B match to protein family HMM PF04344;gbkey=CDS;gene=cheZ;product=chemotaxis protein CheZ;protein_id=YP_855923.1;transl_table=11
NC_008570.1	RefSeq	gene	1518853	1521039	.	+	.	ID=gene1383;Dbxref=GeneID:4486879;Name=cheA-2;gbkey=Gene;gene=cheA-2;gene_biotype=protein_coding;locus_tag=AHA_1385
NC_008570.1	RefSeq	CDS	1518853	1521039	.	+	0	ID=cds1340;Parent=gene1383;Dbxref=Genbank:YP_855924.1,GeneID:4486879;Name=YP_855924.1;Note=identified by similarity to GB:AAC08064.1%3B match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895;gbkey=CDS;gene=cheA-2;product=chemotaxis protein CheA;protein_id=YP_855924.1;transl_table=11
NC_008570.1	RefSeq	gene	1521072	1522187	.	+	.	ID=gene1384;Dbxref=GeneID:4488333;Name=cheB-2;gbkey=Gene;gene=cheB-2;gene_biotype=protein_coding;locus_tag=AHA_1386
NC_008570.1	RefSeq	CDS	1521072	1522187	.	+	0	ID=cds1341;Parent=gene1384;Dbxref=Genbank:YP_855925.1,GeneID:4488333;Name=YP_855925.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;gene=cheB-2;product=chemotaxis-specific methylesterase;protein_id=YP_855925.1;transl_table=11
NC_008570.1	RefSeq	gene	1522196	1522927	.	+	.	ID=gene1385;Dbxref=GeneID:4488334;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AHA_1387
NC_008570.1	RefSeq	CDS	1522196	1522927	.	+	0	ID=cds1342;Parent=gene1385;Dbxref=Genbank:YP_855926.1,GeneID:4488334;Name=YP_855926.1;Note=identified by similarity to SP:P28611%3B match to protein family HMM PF01618;gbkey=CDS;gene=motA;product=chemotaxis protein MotA;protein_id=YP_855926.1;transl_table=11
NC_008570.1	RefSeq	gene	1522930	1523856	.	+	.	ID=gene1386;Dbxref=GeneID:4488335;Name=AHA_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1388
NC_008570.1	RefSeq	CDS	1522930	1523856	.	+	0	ID=cds1343;Parent=gene1386;Dbxref=Genbank:YP_855927.1,GeneID:4488335;Name=YP_855927.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=ompA family protein;protein_id=YP_855927.1;transl_table=11
NC_008570.1	RefSeq	gene	1523861	1524655	.	+	.	ID=gene1387;Dbxref=GeneID:4488336;Name=AHA_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1389
NC_008570.1	RefSeq	CDS	1523861	1524655	.	+	0	ID=cds1344;Parent=gene1387;Dbxref=Genbank:YP_855928.1,GeneID:4488336;Name=YP_855928.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=CobQ/CobB/MinD/ParA family protein;protein_id=YP_855928.1;transl_table=11
NC_008570.1	RefSeq	gene	1524652	1525524	.	+	.	ID=gene1388;Dbxref=GeneID:4488337;Name=AHA_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1390
NC_008570.1	RefSeq	CDS	1524652	1525524	.	+	0	ID=cds1345;Parent=gene1388;Dbxref=Genbank:YP_855929.1,GeneID:4488337;Name=YP_855929.1;Note=identified by match to protein family HMM PF01584;gbkey=CDS;product=chemotaxis protein CheW;protein_id=YP_855929.1;transl_table=11
NC_008570.1	RefSeq	gene	1525594	1526082	.	+	.	ID=gene1389;Dbxref=GeneID:4488338;Name=cheW-2;gbkey=Gene;gene=cheW-2;gene_biotype=protein_coding;locus_tag=AHA_1391
NC_008570.1	RefSeq	CDS	1525594	1526082	.	+	0	ID=cds1346;Parent=gene1389;Dbxref=Genbank:YP_855930.1,GeneID:4488338;Name=YP_855930.1;Note=identified by match to protein family HMM PF01584;gbkey=CDS;gene=cheW-2;product=chemotaxis protein CheW;protein_id=YP_855930.1;transl_table=11
NC_008570.1	RefSeq	gene	1526101	1526487	.	+	.	ID=gene1390;Dbxref=GeneID:4488339;Name=AHA_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1392
NC_008570.1	RefSeq	CDS	1526101	1526487	.	+	0	ID=cds1347;Parent=gene1390;Dbxref=Genbank:YP_855931.1,GeneID:4488339;Name=YP_855931.1;gbkey=CDS;product=DNA repair ATPase;protein_id=YP_855931.1;transl_table=11
NC_008570.1	RefSeq	gene	1526642	1527277	.	+	.	ID=gene1391;Dbxref=GeneID:4488340;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AHA_1393
NC_008570.1	RefSeq	CDS	1526642	1527277	.	+	0	ID=cds1348;Parent=gene1391;Dbxref=Genbank:YP_855932.1,GeneID:4488340;Name=YP_855932.1;Note=identified by similarity to SP:P33931%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR01189;gbkey=CDS;gene=ccmA;product=heme ABC exporter%2C ATP-binding protein CcmA;protein_id=YP_855932.1;transl_table=11
NC_008570.1	RefSeq	gene	1527283	1527951	.	+	.	ID=gene1392;Dbxref=GeneID:4488341;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AHA_1394
NC_008570.1	RefSeq	CDS	1527283	1527951	.	+	0	ID=cds1349;Parent=gene1392;Dbxref=Genbank:YP_855933.1,GeneID:4488341;Name=YP_855933.1;Note=identified by similarity to SP:P33930%3B match to protein family HMM PF03379%3B match to protein family HMM TIGR01190;gbkey=CDS;gene=ccmB;product=heme exporter protein CcmB;protein_id=YP_855933.1;transl_table=11
NC_008570.1	RefSeq	gene	1528115	1528855	.	+	.	ID=gene1393;Dbxref=GeneID:4488342;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AHA_1395
NC_008570.1	RefSeq	CDS	1528115	1528855	.	+	0	ID=cds1350;Parent=gene1393;Dbxref=Genbank:YP_855934.1,GeneID:4488342;Name=YP_855934.1;Note=identified by similarity to SP:P33929%3B match to protein family HMM PF01578%3B match to protein family HMM TIGR01191;gbkey=CDS;gene=ccmC;product=heme exporter protein C;protein_id=YP_855934.1;transl_table=11
NC_008570.1	RefSeq	gene	1528858	1529064	.	+	.	ID=gene1394;Dbxref=GeneID:4488343;Name=AHA_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1396
NC_008570.1	RefSeq	CDS	1528858	1529064	.	+	0	ID=cds1351;Parent=gene1394;Dbxref=Genbank:YP_855935.1,GeneID:4488343;Name=YP_855935.1;Note=identified by match to protein family HMM PF04995;gbkey=CDS;product=hypothetical protein;protein_id=YP_855935.1;transl_table=11
NC_008570.1	RefSeq	gene	1529061	1529552	.	+	.	ID=gene1395;Dbxref=GeneID:4488344;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AHA_1397
NC_008570.1	RefSeq	CDS	1529061	1529552	.	+	0	ID=cds1352;Parent=gene1395;Dbxref=Genbank:YP_855936.1,GeneID:4488344;Name=YP_855936.1;Note=identified by match to protein family HMM PF03100;gbkey=CDS;gene=ccmE;product=cytochrome c-type biogenesis protein CcmE;protein_id=YP_855936.1;transl_table=11
NC_008570.1	RefSeq	gene	1529635	1531590	.	+	.	ID=gene1396;Dbxref=GeneID:4488345;Name=ccmF-1;gbkey=Gene;gene=ccmF-1;gene_biotype=protein_coding;locus_tag=AHA_1398
NC_008570.1	RefSeq	CDS	1529635	1531590	.	+	0	ID=cds1353;Parent=gene1396;Dbxref=Genbank:YP_855937.1,GeneID:4488345;Name=YP_855937.1;Note=identified by match to protein family HMM PF01578%3B match to protein family HMM TIGR00353;gbkey=CDS;gene=ccmF-1;product=cytochrome c-type biogenesis protein CcmF;protein_id=YP_855937.1;transl_table=11
NC_008570.1	RefSeq	gene	1531587	1532117	.	+	.	ID=gene1397;Dbxref=GeneID:4488346;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AHA_1399
NC_008570.1	RefSeq	CDS	1531587	1532117	.	+	0	ID=cds1354;Parent=gene1397;Dbxref=Genbank:YP_855938.1,GeneID:4488346;Name=YP_855938.1;Note=identified by similarity to SP:P0AA86%3B match to protein family HMM TIGR00385;gbkey=CDS;gene=dsbE;product=thiol:disulfide interchange protein DsbE;protein_id=YP_855938.1;transl_table=11
NC_008570.1	RefSeq	gene	1532129	1532608	.	+	.	ID=gene1398;Dbxref=GeneID:4488347;Name=AHA_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1400
NC_008570.1	RefSeq	CDS	1532129	1532608	.	+	0	ID=cds1355;Parent=gene1398;Dbxref=Genbank:YP_855939.1,GeneID:4488347;Name=YP_855939.1;Note=identified by match to protein family HMM PF03918;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmH;protein_id=YP_855939.1;transl_table=11
NC_008570.1	RefSeq	gene	1532605	1533879	.	+	.	ID=gene1399;Dbxref=GeneID:4488348;Name=AHA_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1401
NC_008570.1	RefSeq	CDS	1532605	1533879	.	+	0	ID=cds1356;Parent=gene1399;Dbxref=Genbank:YP_855940.1,GeneID:4488348;Name=YP_855940.1;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmH;protein_id=YP_855940.1;transl_table=11
NC_008570.1	RefSeq	gene	1533984	1534772	.	+	.	ID=gene1400;Dbxref=GeneID:4488349;Name=vacJ;gbkey=Gene;gene=vacJ;gene_biotype=protein_coding;locus_tag=AHA_1402
NC_008570.1	RefSeq	CDS	1533984	1534772	.	+	0	ID=cds1357;Parent=gene1400;Dbxref=Genbank:YP_855941.1,GeneID:4488349;Name=YP_855941.1;Note=identified by match to protein family HMM PF04333;gbkey=CDS;gene=vacJ;product=lipoprotein VacJ;protein_id=YP_855941.1;transl_table=11
NC_008570.1	RefSeq	gene	1534899	1535483	.	-	.	ID=gene1401;Dbxref=GeneID:4488350;Name=AHA_1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1403
NC_008570.1	RefSeq	CDS	1534899	1535483	.	-	0	ID=cds1358;Parent=gene1401;Dbxref=Genbank:YP_855942.1,GeneID:4488350;Name=YP_855942.1;Note=identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777;gbkey=CDS;product=superoxide dismutase;protein_id=YP_855942.1;transl_table=11
NC_008570.1	RefSeq	gene	1535770	1536114	.	+	.	ID=gene1402;Dbxref=GeneID:4488351;Name=AHA_1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1404
NC_008570.1	RefSeq	CDS	1535770	1536114	.	+	0	ID=cds1359;Parent=gene1402;Dbxref=Genbank:YP_855943.1,GeneID:4488351;Name=YP_855943.1;Note=identified by match to protein family HMM PF00462%3B match to protein family HMM TIGR00365;gbkey=CDS;product=glutaredoxin-like protein;protein_id=YP_855943.1;transl_table=11
NC_008570.1	RefSeq	gene	1536192	1537505	.	-	.	ID=gene1403;Dbxref=GeneID:4487075;Name=AHA_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1405
NC_008570.1	RefSeq	CDS	1536192	1537505	.	-	0	ID=cds1360;Parent=gene1403;Dbxref=Genbank:YP_855944.1,GeneID:4487075;Name=YP_855944.1;Note=identified by match to protein family HMM PF01189;gbkey=CDS;product=tRNA and rRNA cytosine-C5-methylase;protein_id=YP_855944.1;transl_table=11
NC_008570.1	RefSeq	gene	1537565	1539595	.	+	.	ID=gene1404;Dbxref=GeneID:4487076;Name=AHA_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1406
NC_008570.1	RefSeq	CDS	1537565	1539595	.	+	0	ID=cds1361;Parent=gene1404;Dbxref=Genbank:YP_855945.1,GeneID:4487076;Name=YP_855945.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855945.1;transl_table=11
NC_008570.1	RefSeq	gene	1539592	1539915	.	+	.	ID=gene1405;Dbxref=GeneID:4487077;Name=AHA_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1407
NC_008570.1	RefSeq	CDS	1539592	1539915	.	+	0	ID=cds1362;Parent=gene1405;Dbxref=Genbank:YP_855946.1,GeneID:4487077;Name=YP_855946.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855946.1;transl_table=11
NC_008570.1	RefSeq	gene	1540087	1540725	.	+	.	ID=gene1406;Dbxref=GeneID:4487078;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AHA_1408
NC_008570.1	RefSeq	CDS	1540087	1540725	.	+	0	ID=cds1363;Parent=gene1406;Dbxref=Genbank:YP_855947.1,GeneID:4487078;Name=YP_855947.1;Note=identified by similarity to SP:P28225%3B match to protein family HMM PF01243%3B match to protein family HMM TIGR00558;gbkey=CDS;gene=pdxH;product=pyridoxamine 5'-phosphate oxidase;protein_id=YP_855947.1;transl_table=11
NC_008570.1	RefSeq	gene	1540755	1541369	.	+	.	ID=gene1407;Dbxref=GeneID:4487079;Name=AHA_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1409
NC_008570.1	RefSeq	CDS	1540755	1541369	.	+	0	ID=cds1364;Parent=gene1407;Dbxref=Genbank:YP_855948.1,GeneID:4487079;Name=YP_855948.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_855948.1;transl_table=11
NC_008570.1	RefSeq	gene	1541369	1542988	.	+	.	ID=gene1408;Dbxref=GeneID:4487080;Name=AHA_1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1410
NC_008570.1	RefSeq	CDS	1541369	1542988	.	+	0	ID=cds1365;Parent=gene1408;Dbxref=Genbank:YP_855949.1,GeneID:4487080;Name=YP_855949.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855949.1;transl_table=11
NC_008570.1	RefSeq	gene	1543021	1543542	.	+	.	ID=gene1409;Dbxref=GeneID:4487081;Name=AHA_1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1411
NC_008570.1	RefSeq	CDS	1543021	1543542	.	+	0	ID=cds1366;Parent=gene1409;Dbxref=Genbank:YP_855950.1,GeneID:4487081;Name=YP_855950.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_855950.1;transl_table=11
NC_008570.1	RefSeq	gene	1543602	1544732	.	-	.	ID=gene1410;Dbxref=GeneID:4487082;Name=AHA_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1412
NC_008570.1	RefSeq	CDS	1543602	1544732	.	-	0	ID=cds1367;Parent=gene1410;Dbxref=Genbank:YP_855951.1,GeneID:4487082;Name=YP_855951.1;Note=identified by match to protein family HMM PF08007;gbkey=CDS;product=cupin superfamily protein;protein_id=YP_855951.1;transl_table=11
NC_008570.1	RefSeq	gene	1544898	1546268	.	-	.	ID=gene1411;Dbxref=GeneID:4487083;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AHA_1413
NC_008570.1	RefSeq	CDS	1544898	1546268	.	-	0	ID=cds1368;Parent=gene1411;Dbxref=Genbank:YP_855952.1,GeneID:4487083;Name=YP_855952.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=YP_855952.1;transl_table=11
NC_008570.1	RefSeq	gene	1546396	1547010	.	-	.	ID=gene1412;Dbxref=GeneID:4487084;Name=AHA_1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1414
NC_008570.1	RefSeq	CDS	1546396	1547010	.	-	0	ID=cds1369;Parent=gene1412;Dbxref=Genbank:YP_855953.1,GeneID:4487084;Name=YP_855953.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=hypothetical protein;protein_id=YP_855953.1;transl_table=11
NC_008570.1	RefSeq	gene	1547223	1548329	.	-	.	ID=gene1413;Dbxref=GeneID:4487085;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AHA_1415
NC_008570.1	RefSeq	CDS	1547223	1548329	.	-	0	ID=cds1370;Parent=gene1413;Dbxref=Genbank:YP_855954.1,GeneID:4487085;Name=YP_855954.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_855954.1;transl_table=11
NC_008570.1	RefSeq	gene	1548648	1549115	.	-	.	ID=gene1414;Dbxref=GeneID:4487086;Name=AHA_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1416
NC_008570.1	RefSeq	CDS	1548648	1549115	.	-	0	ID=cds1371;Parent=gene1414;Dbxref=Genbank:YP_855955.1,GeneID:4487086;Name=YP_855955.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=7%2C8-dihydro-8-oxoguanine-triphosphatase;protein_id=YP_855955.1;transl_table=11
NC_008570.1	RefSeq	gene	1549211	1550152	.	-	.	ID=gene1415;Dbxref=GeneID:4487087;Name=AHA_1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1417
NC_008570.1	RefSeq	CDS	1549211	1550152	.	-	0	ID=cds1372;Parent=gene1415;Dbxref=Genbank:YP_855956.1,GeneID:4487087;Name=YP_855956.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00093;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=YP_855956.1;transl_table=11
NC_008570.1	RefSeq	gene	1550219	1550986	.	-	.	ID=gene1416;Dbxref=GeneID:4487088;Name=AHA_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1418
NC_008570.1	RefSeq	CDS	1550219	1550986	.	-	0	ID=cds1373;Parent=gene1416;Dbxref=Genbank:YP_855957.1,GeneID:4487088;Name=YP_855957.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=fructose specific permease;protein_id=YP_855957.1;transl_table=11
NC_008570.1	RefSeq	gene	1550987	1551292	.	-	.	ID=gene1417;Dbxref=GeneID:4487089;Name=AHA_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1419
NC_008570.1	RefSeq	CDS	1550987	1551292	.	-	0	ID=cds1374;Parent=gene1417;Dbxref=Genbank:YP_855958.1,GeneID:4487089;Name=YP_855958.1;Note=identified by match to protein family HMM PF02379%3B match to protein family HMM TIGR00829;gbkey=CDS;product=phosphotransferase system enzyme II%2C fructose-specific;protein_id=YP_855958.1;transl_table=11
NC_008570.1	RefSeq	gene	1551591	1552997	.	-	.	ID=gene1418;Dbxref=GeneID:4487090;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AHA_1420
NC_008570.1	RefSeq	CDS	1551591	1552997	.	-	0	ID=cds1375;Parent=gene1418;Dbxref=Genbank:YP_855959.1,GeneID:4487090;Name=YP_855959.1;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate;gbkey=CDS;gene=uhpT;product=sugar phosphate antiporter;protein_id=YP_855959.1;transl_table=11
NC_008570.1	RefSeq	gene	1553411	1555318	.	-	.	ID=gene1419;Dbxref=GeneID:4487091;Name=AHA_1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1421
NC_008570.1	RefSeq	CDS	1553411	1555318	.	-	0	ID=cds1376;Parent=gene1419;Dbxref=Genbank:YP_855960.1,GeneID:4487091;Name=YP_855960.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427;gbkey=CDS;product=pts system%2C fructose-specific IIABC component;protein_id=YP_855960.1;transl_table=11
NC_008570.1	RefSeq	gene	1557075	1557551	.	-	.	ID=gene1420;Dbxref=GeneID:4487092;Name=AHA_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1422
NC_008570.1	RefSeq	CDS	1557075	1557551	.	-	0	ID=cds1377;Parent=gene1420;Dbxref=Genbank:YP_855961.1,GeneID:4487092;Name=YP_855961.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=IAA acetyltransferase;protein_id=YP_855961.1;transl_table=11
NC_008570.1	RefSeq	gene	1557605	1557880	.	-	.	ID=gene1421;Dbxref=GeneID:4487093;Name=AHA_1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1423
NC_008570.1	RefSeq	CDS	1557605	1557880	.	-	0	ID=cds1378;Parent=gene1421;Dbxref=Genbank:YP_855962.1,GeneID:4487093;Name=YP_855962.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855962.1;transl_table=11
NC_008570.1	RefSeq	gene	1557976	1558440	.	-	.	ID=gene1422;Dbxref=GeneID:4487094;Name=AHA_1424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1424
NC_008570.1	RefSeq	CDS	1557976	1558440	.	-	0	ID=cds1379;Parent=gene1422;Dbxref=Genbank:YP_855963.1,GeneID:4487094;Name=YP_855963.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=YP_855963.1;transl_table=11
NC_008570.1	RefSeq	gene	1558653	1559897	.	+	.	ID=gene1423;Dbxref=GeneID:4490611;Name=AHA_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1425
NC_008570.1	RefSeq	CDS	1558653	1559897	.	+	0	ID=cds1380;Parent=gene1423;Dbxref=Genbank:YP_855964.1,GeneID:4490611;Name=YP_855964.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;product=FMN-binding oxidoreductase;protein_id=YP_855964.1;transl_table=11
NC_008570.1	RefSeq	gene	1559923	1560960	.	-	.	ID=gene1424;Dbxref=GeneID:4490612;Name=malI-1;gbkey=Gene;gene=malI-1;gene_biotype=protein_coding;locus_tag=AHA_1426
NC_008570.1	RefSeq	CDS	1559923	1560960	.	-	0	ID=cds1381;Parent=gene1424;Dbxref=Genbank:YP_855965.1,GeneID:4490612;Name=YP_855965.1;Note=regulates malXY which are involved in maltose-glucose transport;gbkey=CDS;gene=malI-1;product=DNA-binding transcriptional repressor MalI;protein_id=YP_855965.1;transl_table=11
NC_008570.1	RefSeq	gene	1561236	1562822	.	+	.	ID=gene1425;Dbxref=GeneID:4490613;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AHA_1427
NC_008570.1	RefSeq	CDS	1561236	1562822	.	+	0	ID=cds1382;Parent=gene1425;Dbxref=Genbank:YP_855966.1,GeneID:4490613;Name=YP_855966.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;gbkey=CDS;gene=malX;product=bifunctional PTS system maltose and glucose-specific transporter subunits IICB;protein_id=YP_855966.1;transl_table=11
NC_008570.1	RefSeq	gene	1562896	1564098	.	+	.	ID=gene1426;Dbxref=GeneID:4490614;Name=AHA_1428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1428
NC_008570.1	RefSeq	CDS	1562896	1564098	.	+	0	ID=cds1383;Parent=gene1426;Dbxref=Genbank:YP_855967.1,GeneID:4490614;Name=YP_855967.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=protein MalY;protein_id=YP_855967.1;transl_table=11
NC_008570.1	RefSeq	gene	1564126	1564785	.	-	.	ID=gene1427;Dbxref=GeneID:4490615;Name=AHA_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1429
NC_008570.1	RefSeq	CDS	1564126	1564785	.	-	0	ID=cds1384;Parent=gene1427;Dbxref=Genbank:YP_855968.1,GeneID:4490615;Name=YP_855968.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855968.1;transl_table=11
NC_008570.1	RefSeq	gene	1564945	1565289	.	-	.	ID=gene1428;Dbxref=GeneID:4490616;Name=AHA_1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1430
NC_008570.1	RefSeq	CDS	1564945	1565289	.	-	0	ID=cds1385;Parent=gene1428;Dbxref=Genbank:YP_855969.1,GeneID:4490616;Name=YP_855969.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855969.1;transl_table=11
NC_008570.1	RefSeq	gene	1565433	1567817	.	-	.	ID=gene1429;Dbxref=GeneID:4490617;Name=AHA_1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1431
NC_008570.1	RefSeq	CDS	1565433	1567817	.	-	0	ID=cds1386;Parent=gene1429;Dbxref=Genbank:YP_855970.1,GeneID:4490617;Name=YP_855970.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427;gbkey=CDS;product=pts system%2C fructose-specific IIABC component;protein_id=YP_855970.1;transl_table=11
NC_008570.1	RefSeq	gene	1568050	1568199	.	+	.	ID=gene1430;Dbxref=GeneID:4490618;Name=AHA_1432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1432
NC_008570.1	RefSeq	CDS	1568050	1568199	.	+	0	ID=cds1387;Parent=gene1430;Dbxref=Genbank:YP_855971.1,GeneID:4490618;Name=YP_855971.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855971.1;transl_table=11
NC_008570.1	RefSeq	gene	1568276	1568974	.	-	.	ID=gene1431;Dbxref=GeneID:4490619;Name=AHA_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1433
NC_008570.1	RefSeq	CDS	1568276	1568974	.	-	0	ID=cds1388;Parent=gene1431;Dbxref=Genbank:YP_855972.1,GeneID:4490619;Name=YP_855972.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855972.1;transl_table=11
NC_008570.1	RefSeq	gene	1569022	1570221	.	-	.	ID=gene1432;Dbxref=GeneID:4490620;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AHA_1434
NC_008570.1	RefSeq	CDS	1569022	1570221	.	-	0	ID=cds1389;Parent=gene1432;Dbxref=Genbank:YP_855973.1,GeneID:4490620;Name=YP_855973.1;Note=identified by match to protein family HMM PF01238%3B match to protein family HMM TIGR00218;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=YP_855973.1;transl_table=11
NC_008570.1	RefSeq	gene	1570336	1571226	.	+	.	ID=gene1433;Dbxref=GeneID:4490621;Name=AHA_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1435
NC_008570.1	RefSeq	CDS	1570336	1571226	.	+	0	ID=cds1390;Parent=gene1433;Dbxref=Genbank:YP_855974.1,GeneID:4490621;Name=YP_855974.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=HTH-type transcriptional regulator YijO;protein_id=YP_855974.1;transl_table=11
NC_008570.1	RefSeq	gene	1571429	1572682	.	+	.	ID=gene1434;Dbxref=GeneID:4490622;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AHA_1436
NC_008570.1	RefSeq	CDS	1571429	1572682	.	+	0	ID=cds1391;Parent=gene1434;Dbxref=Genbank:YP_855975.1,GeneID:4490622;Name=YP_855975.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;gene=icd;product=isocitrate dehydrogenase;protein_id=YP_855975.1;transl_table=11
NC_008570.1	RefSeq	gene	1572770	1572946	.	-	.	ID=gene1435;Dbxref=GeneID:4490623;Name=AHA_1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1437
NC_008570.1	RefSeq	CDS	1572770	1572946	.	-	0	ID=cds1392;Parent=gene1435;Dbxref=Genbank:YP_855976.1,GeneID:4490623;Name=YP_855976.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855976.1;transl_table=11
NC_008570.1	RefSeq	gene	1573281	1574612	.	-	.	ID=gene1436;Dbxref=GeneID:4490624;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AHA_1438
NC_008570.1	RefSeq	CDS	1573281	1574612	.	-	0	ID=cds1393;Parent=gene1436;Dbxref=Genbank:YP_855977.1,GeneID:4490624;Name=YP_855977.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;gene=dsdA;product=D-serine dehydratase;protein_id=YP_855977.1;transl_table=11
NC_008570.1	RefSeq	gene	1574911	1575870	.	+	.	ID=gene1437;Dbxref=GeneID:4490625;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AHA_1439
NC_008570.1	RefSeq	CDS	1574911	1575870	.	+	0	ID=cds1394;Parent=gene1437;Dbxref=Genbank:YP_855978.1,GeneID:4490625;Name=YP_855978.1;Note=regulates the synthesis and expression of the dsdXA operon and dadA gene;gbkey=CDS;gene=dsdC;product=DNA-binding transcriptional regulator DsdC;protein_id=YP_855978.1;transl_table=11
NC_008570.1	RefSeq	gene	1575913	1576578	.	+	.	ID=gene1438;Dbxref=GeneID:4490626;Name=AHA_1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1440
NC_008570.1	RefSeq	CDS	1575913	1576578	.	+	0	ID=cds1395;Parent=gene1438;Dbxref=Genbank:YP_855979.1,GeneID:4490626;Name=YP_855979.1;Note=identified by similarity to GB:CAG37011.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855979.1;transl_table=11
NC_008570.1	RefSeq	gene	1576562	1577623	.	+	.	ID=gene1439;Dbxref=GeneID:4490627;Name=AHA_1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1441
NC_008570.1	RefSeq	CDS	1576562	1577623	.	+	0	ID=cds1396;Parent=gene1439;Dbxref=Genbank:YP_855980.1,GeneID:4490627;Name=YP_855980.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855980.1;transl_table=11
NC_008570.1	RefSeq	gene	1577701	1578060	.	-	.	ID=gene1440;Dbxref=GeneID:4490628;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=misc_RNA;locus_tag=AHA_1442
NC_008570.1	RefSeq	transcript	1577701	1578060	.	-	.	ID=rna42;Parent=gene1440;Dbxref=GeneID:4490628;gbkey=misc_RNA;gene=ssrA;product=10Sa RNA (tmRNA)
NC_008570.1	RefSeq	exon	1577701	1578060	.	-	.	ID=id43;Parent=rna42;Dbxref=GeneID:4490628;gbkey=misc_RNA;gene=ssrA;product=10Sa RNA (tmRNA)
NC_008570.1	RefSeq	gene	1578180	1578668	.	-	.	ID=gene1441;Dbxref=GeneID:4490629;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AHA_1443
NC_008570.1	RefSeq	CDS	1578180	1578668	.	-	0	ID=cds1397;Parent=gene1441;Dbxref=Genbank:YP_855981.1,GeneID:4490629;Name=YP_855981.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=YP_855981.1;transl_table=11
NC_008570.1	RefSeq	gene	1578838	1579272	.	+	.	ID=gene1442;Dbxref=GeneID:4486880;Name=AHA_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1444
NC_008570.1	RefSeq	CDS	1578838	1579272	.	+	0	ID=cds1398;Parent=gene1442;Dbxref=Genbank:YP_855982.1,GeneID:4486880;Name=YP_855982.1;Note=identified by match to protein family HMM PF03364;gbkey=CDS;product=oligoketide cyclase/lipid transport protein;protein_id=YP_855982.1;transl_table=11
NC_008570.1	RefSeq	gene	1579265	1579612	.	+	.	ID=gene1443;Dbxref=GeneID:4486881;Name=AHA_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1445
NC_008570.1	RefSeq	CDS	1579265	1579612	.	+	0	ID=cds1399;Parent=gene1443;Dbxref=Genbank:YP_855983.1,GeneID:4486881;Name=YP_855983.1;Note=identified by match to protein family HMM PF03658;gbkey=CDS;product=protein YfjF;protein_id=YP_855983.1;transl_table=11
NC_008570.1	RefSeq	gene	1579740	1580375	.	-	.	ID=gene1444;Dbxref=GeneID:4486882;Name=AHA_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1446
NC_008570.1	RefSeq	CDS	1579740	1580375	.	-	0	ID=cds1400;Parent=gene1444;Dbxref=Genbank:YP_855984.1,GeneID:4486882;Name=YP_855984.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=nucleoside-diphosphate-sugar epimerase;protein_id=YP_855984.1;transl_table=11
NC_008570.1	RefSeq	gene	1580500	1580838	.	-	.	ID=gene1445;Dbxref=GeneID:4486883;Name=AHA_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1447
NC_008570.1	RefSeq	CDS	1580500	1580838	.	-	0	ID=cds1401;Parent=gene1445;Dbxref=Genbank:YP_855985.1,GeneID:4486883;Name=YP_855985.1;Note=identified by match to protein family HMM PF04355;gbkey=CDS;product=outer membrane lipoprotein OmlA;protein_id=YP_855985.1;transl_table=11
NC_008570.1	RefSeq	gene	1580959	1581678	.	-	.	ID=gene1446;Dbxref=GeneID:4486884;Name=AHA_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1448
NC_008570.1	RefSeq	CDS	1580959	1581678	.	-	0	ID=cds1402;Parent=gene1446;Dbxref=Genbank:YP_855986.1,GeneID:4486884;Name=YP_855986.1;Note=identified by match to protein family HMM PF07603;gbkey=CDS;product=hypothetical protein;protein_id=YP_855986.1;transl_table=11
NC_008570.1	RefSeq	gene	1581680	1584766	.	-	.	ID=gene1447;Dbxref=GeneID:4486885;Name=AHA_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1449
NC_008570.1	RefSeq	CDS	1581680	1584766	.	-	0	ID=cds1403;Parent=gene1447;Dbxref=Genbank:YP_855987.1,GeneID:4486885;Name=YP_855987.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855987.1;transl_table=11
NC_008570.1	RefSeq	gene	1584989	1585192	.	+	.	ID=gene1448;Dbxref=GeneID:4486886;Name=AHA_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1450
NC_008570.1	RefSeq	CDS	1584989	1585192	.	+	0	ID=cds1404;Parent=gene1448;Dbxref=Genbank:YP_855988.1,GeneID:4486886;Name=YP_855988.1;Note=identified by match to protein family HMM PF04964;gbkey=CDS;product=Flp/Fap pilin component superfamily protein;protein_id=YP_855988.1;transl_table=11
NC_008570.1	RefSeq	gene	1585189	1585605	.	+	.	ID=gene1449;Dbxref=GeneID:4486887;Name=AHA_1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1451
NC_008570.1	RefSeq	CDS	1585189	1585605	.	+	0	ID=cds1405;Parent=gene1449;Dbxref=Genbank:YP_855989.1,GeneID:4486887;Name=YP_855989.1;Note=identified by match to protein family HMM PF01478;gbkey=CDS;product=leader peptidase PilD;protein_id=YP_855989.1;transl_table=11
NC_008570.1	RefSeq	gene	1585615	1586505	.	+	.	ID=gene1450;Dbxref=GeneID:4486888;Name=AHA_1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1452
NC_008570.1	RefSeq	CDS	1585615	1586505	.	+	0	ID=cds1406;Parent=gene1450;Dbxref=Genbank:YP_855990.1,GeneID:4486888;Name=YP_855990.1;Note=identified by match to protein family HMM PF06981;gbkey=CDS;product=Flp pilus assembly protein CpaB;protein_id=YP_855990.1;transl_table=11
NC_008570.1	RefSeq	gene	1586525	1587922	.	+	.	ID=gene1451;Dbxref=GeneID:4486889;Name=AHA_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1453
NC_008570.1	RefSeq	CDS	1586525	1587922	.	+	0	ID=cds1407;Parent=gene1451;Dbxref=Genbank:YP_855991.1,GeneID:4486889;Name=YP_855991.1;Note=identified by match to protein family HMM PF00263;gbkey=CDS;product=outer membrane secretin family protein;protein_id=YP_855991.1;transl_table=11
NC_008570.1	RefSeq	gene	1587934	1588482	.	+	.	ID=gene1452;Dbxref=GeneID:4486890;Name=AHA_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1454
NC_008570.1	RefSeq	CDS	1587934	1588482	.	+	0	ID=cds1408;Parent=gene1452;Dbxref=Genbank:YP_855992.1,GeneID:4486890;Name=YP_855992.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855992.1;transl_table=11
NC_008570.1	RefSeq	gene	1588486	1589619	.	+	.	ID=gene1453;Dbxref=GeneID:4486891;Name=AHA_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1455
NC_008570.1	RefSeq	CDS	1588486	1589619	.	+	0	ID=cds1409;Parent=gene1453;Dbxref=Genbank:YP_855993.1,GeneID:4486891;Name=YP_855993.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855993.1;transl_table=11
NC_008570.1	RefSeq	gene	1589619	1590932	.	+	.	ID=gene1454;Dbxref=GeneID:4486892;Name=AHA_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1456
NC_008570.1	RefSeq	CDS	1589619	1590932	.	+	0	ID=cds1410;Parent=gene1454;Dbxref=Genbank:YP_855994.1,GeneID:4486892;Name=YP_855994.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;product=protein CpaF;protein_id=YP_855994.1;transl_table=11
NC_008570.1	RefSeq	gene	1590929	1591813	.	+	.	ID=gene1455;Dbxref=GeneID:4486893;Name=AHA_1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1457
NC_008570.1	RefSeq	CDS	1590929	1591813	.	+	0	ID=cds1411;Parent=gene1455;Dbxref=Genbank:YP_855995.1,GeneID:4486893;Name=YP_855995.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;product=Flp pilus assembly protein TadB;protein_id=YP_855995.1;transl_table=11
NC_008570.1	RefSeq	gene	1591817	1592701	.	+	.	ID=gene1456;Dbxref=GeneID:4486894;Name=AHA_1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1458
NC_008570.1	RefSeq	CDS	1591817	1592701	.	+	0	ID=cds1412;Parent=gene1456;Dbxref=Genbank:YP_855996.1,GeneID:4486894;Name=YP_855996.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;product=Flp pilus assembly protein TadC;protein_id=YP_855996.1;transl_table=11
NC_008570.1	RefSeq	gene	1592721	1593485	.	+	.	ID=gene1457;Dbxref=GeneID:4486895;Name=AHA_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1459
NC_008570.1	RefSeq	CDS	1592721	1593485	.	+	0	ID=cds1413;Parent=gene1457;Dbxref=Genbank:YP_855997.1,GeneID:4486895;Name=YP_855997.1;gbkey=CDS;product=Flp pilus assembly protein TadD;protein_id=YP_855997.1;transl_table=11
NC_008570.1	RefSeq	gene	1593482	1593955	.	+	.	ID=gene1458;Dbxref=GeneID:4486896;Name=AHA_1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1460
NC_008570.1	RefSeq	CDS	1593482	1593955	.	+	0	ID=cds1414;Parent=gene1458;Dbxref=Genbank:YP_855998.1,GeneID:4486896;Name=YP_855998.1;Note=identified by match to protein family HMM PF07811;gbkey=CDS;product=hypothetical protein;protein_id=YP_855998.1;transl_table=11
NC_008570.1	RefSeq	gene	1593952	1594458	.	+	.	ID=gene1459;Dbxref=GeneID:4486897;Name=AHA_1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1461
NC_008570.1	RefSeq	CDS	1593952	1594458	.	+	0	ID=cds1415;Parent=gene1459;Dbxref=Genbank:YP_855999.1,GeneID:4486897;Name=YP_855999.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_855999.1;transl_table=11
NC_008570.1	RefSeq	gene	1594459	1595841	.	+	.	ID=gene1460;Dbxref=GeneID:4486898;Name=AHA_1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1462
NC_008570.1	RefSeq	CDS	1594459	1595841	.	+	0	ID=cds1416;Parent=gene1460;Dbxref=Genbank:YP_856000.1,GeneID:4486898;Name=YP_856000.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856000.1;transl_table=11
NC_008570.1	RefSeq	gene	1595906	1597057	.	-	.	ID=gene1461;Dbxref=GeneID:4486899;Name=AHA_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1463
NC_008570.1	RefSeq	CDS	1595906	1597057	.	-	0	ID=cds1417;Parent=gene1461;Dbxref=Genbank:YP_856001.1,GeneID:4486899;Name=YP_856001.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=1%2C3-propanediol dehydrogenase;protein_id=YP_856001.1;transl_table=11
NC_008570.1	RefSeq	gene	1597450	1598205	.	+	.	ID=gene1462;Dbxref=GeneID:4488240;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AHA_1464
NC_008570.1	RefSeq	CDS	1597450	1598205	.	+	0	ID=cds1418;Parent=gene1462;Dbxref=Genbank:YP_856002.1,GeneID:4488240;Name=YP_856002.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=YP_856002.1;transl_table=11
NC_008570.1	RefSeq	gene	1598323	1599054	.	-	.	ID=gene1463;Dbxref=GeneID:4488241;Name=AHA_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1465
NC_008570.1	RefSeq	CDS	1598323	1599054	.	-	0	ID=cds1419;Parent=gene1463;Dbxref=Genbank:YP_856003.1,GeneID:4488241;Name=YP_856003.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=YP_856003.1;transl_table=11
NC_008570.1	RefSeq	gene	1599239	1600174	.	+	.	ID=gene1464;Dbxref=GeneID:4488242;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AHA_1466
NC_008570.1	RefSeq	CDS	1599239	1600174	.	+	0	ID=cds1420;Parent=gene1464;Dbxref=Genbank:YP_856004.1,GeneID:4488242;Name=YP_856004.1;Note=Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific;gbkey=CDS;gene=rihA;product=ribonucleoside hydrolase 1;protein_id=YP_856004.1;transl_table=11
NC_008570.1	RefSeq	gene	1600209	1600679	.	+	.	ID=gene1465;Dbxref=GeneID:4488243;Name=AHA_1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1467
NC_008570.1	RefSeq	CDS	1600209	1600679	.	+	0	ID=cds1421;Parent=gene1465;Dbxref=Genbank:YP_856005.1,GeneID:4488243;Name=YP_856005.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856005.1;transl_table=11
NC_008570.1	RefSeq	gene	1600816	1601112	.	-	.	ID=gene1466;Dbxref=GeneID:4488244;Name=AHA_1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1468
NC_008570.1	RefSeq	CDS	1600816	1601112	.	-	0	ID=cds1422;Parent=gene1466;Dbxref=Genbank:YP_856006.1,GeneID:4488244;Name=YP_856006.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856006.1;transl_table=11
NC_008570.1	RefSeq	gene	1601141	1601710	.	-	.	ID=gene1467;Dbxref=GeneID:4488245;Name=AHA_1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1469
NC_008570.1	RefSeq	CDS	1601141	1601710	.	-	0	ID=cds1423;Parent=gene1467;Dbxref=Genbank:YP_856007.1,GeneID:4488245;Name=YP_856007.1;Note=identified by match to protein family HMM PF07509;gbkey=CDS;product=hypothetical protein;protein_id=YP_856007.1;transl_table=11
NC_008570.1	RefSeq	gene	1601850	1603472	.	-	.	ID=gene1468;Dbxref=GeneID:4488246;Name=AHA_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1470
NC_008570.1	RefSeq	CDS	1601850	1603472	.	-	0	ID=cds1424;Parent=gene1468;Dbxref=Genbank:YP_856008.1,GeneID:4488246;Name=YP_856008.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856008.1;transl_table=11
NC_008570.1	RefSeq	gene	1603637	1604269	.	+	.	ID=gene1469;Dbxref=GeneID:4488247;Name=AHA_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1471
NC_008570.1	RefSeq	CDS	1603637	1604269	.	+	0	ID=cds1425;Parent=gene1469;Dbxref=Genbank:YP_856009.1,GeneID:4488247;Name=YP_856009.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_856009.1;transl_table=11
NC_008570.1	RefSeq	gene	1604519	1605307	.	+	.	ID=gene1470;Dbxref=GeneID:4488248;Name=AHA_1472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1472
NC_008570.1	RefSeq	CDS	1604519	1605307	.	+	0	ID=cds1426;Parent=gene1470;Dbxref=Genbank:YP_856010.1,GeneID:4488248;Name=YP_856010.1;Note=identified by match to protein family HMM PF07313;gbkey=CDS;product=hypothetical protein;protein_id=YP_856010.1;transl_table=11
NC_008570.1	RefSeq	gene	1605429	1606637	.	-	.	ID=gene1471;Dbxref=GeneID:4488249;Name=AHA_1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1473
NC_008570.1	RefSeq	CDS	1605429	1606637	.	-	0	ID=cds1427;Parent=gene1471;Dbxref=Genbank:YP_856011.1,GeneID:4488249;Name=YP_856011.1;Note=identified by match to protein family HMM PF00999;gbkey=CDS;product=Na(+)/H(+) antiporter;protein_id=YP_856011.1;transl_table=11
NC_008570.1	RefSeq	gene	1606672	1607775	.	-	.	ID=gene1472;Dbxref=GeneID:4488250;Name=AHA_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1474
NC_008570.1	RefSeq	CDS	1606672	1607775	.	-	0	ID=cds1428;Parent=gene1472;Dbxref=Genbank:YP_856012.1,GeneID:4488250;Name=YP_856012.1;Note=identified by match to protein family HMM PF07555;gbkey=CDS;product=hyaluronidase;protein_id=YP_856012.1;transl_table=11
NC_008570.1	RefSeq	gene	1607818	1609545	.	-	.	ID=gene1473;Dbxref=GeneID:4488251;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=AHA_1475
NC_008570.1	RefSeq	CDS	1607818	1609545	.	-	0	ID=cds1429;Parent=gene1473;Dbxref=Genbank:YP_856013.1,GeneID:4488251;Name=YP_856013.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=potassium/proton antiporter;protein_id=YP_856013.1;transl_table=11
NC_008570.1	RefSeq	gene	1609788	1609934	.	-	.	ID=gene1474;Dbxref=GeneID:4488252;Name=AHA_1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1476
NC_008570.1	RefSeq	CDS	1609788	1609934	.	-	0	ID=cds1430;Parent=gene1474;Dbxref=Genbank:YP_856014.1,GeneID:4488252;Name=YP_856014.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856014.1;transl_table=11
NC_008570.1	RefSeq	gene	1609931	1610620	.	-	.	ID=gene1475;Dbxref=GeneID:4488253;Name=AHA_1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1477
NC_008570.1	RefSeq	CDS	1609931	1610620	.	-	0	ID=cds1431;Parent=gene1475;Dbxref=Genbank:YP_856015.1,GeneID:4488253;Name=YP_856015.1;Note=identified by match to protein family HMM PF02557;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_856015.1;transl_table=11
NC_008570.1	RefSeq	gene	1610617	1611744	.	-	.	ID=gene1476;Dbxref=GeneID:4488254;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AHA_1478
NC_008570.1	RefSeq	CDS	1610617	1611744	.	-	0	ID=cds1432;Parent=gene1476;Dbxref=Genbank:YP_856016.1,GeneID:4488254;Name=YP_856016.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;gene=dapE;product=succinyl-diaminopimelate desuccinylase;protein_id=YP_856016.1;transl_table=11
NC_008570.1	RefSeq	gene	1611767	1612516	.	-	.	ID=gene1477;Dbxref=GeneID:4488255;Name=AHA_1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1479
NC_008570.1	RefSeq	CDS	1611767	1612516	.	-	0	ID=cds1433;Parent=gene1477;Dbxref=Genbank:YP_856017.1,GeneID:4488255;Name=YP_856017.1;Note=identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617;gbkey=CDS;product=arsenate reductase;protein_id=YP_856017.1;transl_table=11
NC_008570.1	RefSeq	gene	1612312	1613223	.	-	.	ID=gene1478;Dbxref=GeneID:4488256;Name=AHA_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1480
NC_008570.1	RefSeq	CDS	1612312	1613223	.	-	0	ID=cds1434;Parent=gene1478;Dbxref=Genbank:YP_856018.1,GeneID:4488256;Name=YP_856018.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856018.1;transl_table=11
NC_008570.1	RefSeq	gene	1613540	1613911	.	-	.	ID=gene1479;Dbxref=GeneID:4488257;Name=AHA_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1481
NC_008570.1	RefSeq	CDS	1613540	1613911	.	-	0	ID=cds1435;Parent=gene1479;Dbxref=Genbank:YP_856019.1,GeneID:4488257;Name=YP_856019.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856019.1;transl_table=11
NC_008570.1	RefSeq	gene	1614141	1615517	.	+	.	ID=gene1480;Dbxref=GeneID:4488258;Name=AHA_1482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1482
NC_008570.1	RefSeq	CDS	1614141	1615517	.	+	0	ID=cds1436;Parent=gene1480;Dbxref=Genbank:YP_856020.1,GeneID:4488258;Name=YP_856020.1;Note=identified by similarity to SP:P45428%3B match to protein family HMM PF03606%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00771;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_856020.1;transl_table=11
NC_008570.1	RefSeq	gene	1615602	1616741	.	+	.	ID=gene1481;Dbxref=GeneID:4487684;Name=AHA_1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1483
NC_008570.1	RefSeq	CDS	1615602	1616741	.	+	0	ID=cds1437;Parent=gene1481;Dbxref=Genbank:YP_856021.1,GeneID:4487684;Name=YP_856021.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;product=carboxypeptidase G2;protein_id=YP_856021.1;transl_table=11
NC_008570.1	RefSeq	gene	1616833	1617489	.	-	.	ID=gene1482;Dbxref=GeneID:4487685;Name=AHA_1484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1484
NC_008570.1	RefSeq	CDS	1616833	1617489	.	-	0	ID=cds1438;Parent=gene1482;Dbxref=Genbank:YP_856022.1,GeneID:4487685;Name=YP_856022.1;Note=identified by match to protein family HMM PF01902;gbkey=CDS;product=hypothetical protein;protein_id=YP_856022.1;transl_table=11
NC_008570.1	RefSeq	gene	1617625	1618968	.	-	.	ID=gene1483;Dbxref=GeneID:4487686;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AHA_1485
NC_008570.1	RefSeq	CDS	1617625	1618968	.	-	0	ID=cds1439;Parent=gene1483;Dbxref=Genbank:YP_856023.1,GeneID:4487686;Name=YP_856023.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;gene=dcuB;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_856023.1;transl_table=11
NC_008570.1	RefSeq	gene	1619345	1620745	.	-	.	ID=gene1484;Dbxref=GeneID:4487687;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AHA_1486
NC_008570.1	RefSeq	CDS	1619345	1620745	.	-	0	ID=cds1440;Parent=gene1484;Dbxref=Genbank:YP_856024.1,GeneID:4487687;Name=YP_856024.1;Note=catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=asnC;product=asparaginyl-tRNA synthetase;protein_id=YP_856024.1;transl_table=11
NC_008570.1	RefSeq	gene	1621286	1622119	.	-	.	ID=gene1485;Dbxref=GeneID:4487688;Name=AHA_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1487
NC_008570.1	RefSeq	CDS	1621286	1622119	.	-	0	ID=cds1441;Parent=gene1485;Dbxref=Genbank:YP_856025.1,GeneID:4487688;Name=YP_856025.1;Note=identified by match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856025.1;transl_table=11
NC_008570.1	RefSeq	gene	1622255	1623718	.	-	.	ID=gene1486;Dbxref=GeneID:4487689;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AHA_1488
NC_008570.1	RefSeq	CDS	1622255	1623718	.	-	0	ID=cds1442;Parent=gene1486;Dbxref=Genbank:YP_856026.1,GeneID:4487689;Name=YP_856026.1;Note=identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508;gbkey=CDS;gene=bioA;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=YP_856026.1;transl_table=11
NC_008570.1	RefSeq	gene	1623721	1624809	.	+	.	ID=gene1487;Dbxref=GeneID:4487690;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AHA_1489
NC_008570.1	RefSeq	CDS	1623721	1624809	.	+	0	ID=cds1443;Parent=gene1487;Dbxref=Genbank:YP_856027.1,GeneID:4487690;Name=YP_856027.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433;gbkey=CDS;gene=bioB;product=biotin synthase;protein_id=YP_856027.1;transl_table=11
NC_008570.1	RefSeq	gene	1624806	1626002	.	+	.	ID=gene1488;Dbxref=GeneID:4487691;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AHA_1490
NC_008570.1	RefSeq	CDS	1624806	1626002	.	+	0	ID=cds1444;Parent=gene1488;Dbxref=Genbank:YP_856028.1,GeneID:4487691;Name=YP_856028.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR00858;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=YP_856028.1;transl_table=11
NC_008570.1	RefSeq	gene	1625992	1626795	.	+	.	ID=gene1489;Dbxref=GeneID:4487692;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AHA_1491
NC_008570.1	RefSeq	CDS	1625992	1626795	.	+	0	ID=cds1445;Parent=gene1489;Dbxref=Genbank:YP_856029.1,GeneID:4487692;Name=YP_856029.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM TIGR02072;gbkey=CDS;gene=bioC;product=biotin biosynthesis protein BioC;protein_id=YP_856029.1;transl_table=11
NC_008570.1	RefSeq	gene	1626878	1627558	.	+	.	ID=gene1490;Dbxref=GeneID:4487693;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AHA_1492
NC_008570.1	RefSeq	CDS	1626878	1627558	.	+	0	ID=cds1446;Parent=gene1490;Dbxref=Genbank:YP_856030.1,GeneID:4487693;Name=YP_856030.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM TIGR00347;gbkey=CDS;gene=bioD;product=dethiobiotin synthase;protein_id=YP_856030.1;transl_table=11
NC_008570.1	RefSeq	gene	1627671	1628543	.	+	.	ID=gene1491;Dbxref=GeneID:4487694;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AHA_1493
NC_008570.1	RefSeq	CDS	1627671	1628543	.	+	0	ID=cds1447;Parent=gene1491;Dbxref=Genbank:YP_856031.1,GeneID:4487694;Name=YP_856031.1;Note=metalloprotease;gbkey=CDS;gene=htpX;product=heat shock protein HtpX;protein_id=YP_856031.1;transl_table=11
NC_008570.1	RefSeq	gene	1628605	1630317	.	-	.	ID=gene1492;Dbxref=GeneID:4487695;Name=AHA_1494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1494
NC_008570.1	RefSeq	CDS	1628605	1630317	.	-	0	ID=cds1448;Parent=gene1492;Dbxref=Genbank:YP_856032.1,GeneID:4487695;Name=YP_856032.1;Note=identified by match to protein family HMM PF00015;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856032.1;transl_table=11
NC_008570.1	RefSeq	gene	1630540	1632528	.	-	.	ID=gene1493;Dbxref=GeneID:4487696;Name=AHA_1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1495
NC_008570.1	RefSeq	CDS	1630540	1632528	.	-	0	ID=cds1449;Parent=gene1493;Dbxref=Genbank:YP_856033.1,GeneID:4487696;Name=YP_856033.1;Note=identified by match to protein family HMM PF00111%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970%3B match to protein family HMM PF03473%3B match to protein family HMM PF03476;gbkey=CDS;product=flavodoxin reductase family 1 protein;protein_id=YP_856033.1;transl_table=11
NC_008570.1	RefSeq	gene	1632745	1634391	.	+	.	ID=gene1494;Dbxref=GeneID:4487697;Name=AHA_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1496
NC_008570.1	RefSeq	CDS	1632745	1634391	.	+	0	ID=cds1450;Parent=gene1494;Dbxref=Genbank:YP_856034.1,GeneID:4487697;Name=YP_856034.1;Note=unknown function;gbkey=CDS;product=glutamate synthase (NADPH) small subunit;protein_id=YP_856034.1;transl_table=11
NC_008570.1	RefSeq	gene	1634388	1637963	.	+	.	ID=gene1495;Dbxref=GeneID:4487698;Name=nifJ-1;gbkey=Gene;gene=nifJ-1;gene_biotype=protein_coding;locus_tag=AHA_1497
NC_008570.1	RefSeq	CDS	1634388	1637963	.	+	0	ID=cds1451;Parent=gene1495;Dbxref=Genbank:YP_856035.1,GeneID:4487698;Name=YP_856035.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ-1;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=YP_856035.1;transl_table=11
NC_008570.1	RefSeq	gene	1639784	1639999	.	-	.	ID=gene1496;Dbxref=GeneID:4487699;Name=AHA_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1498
NC_008570.1	RefSeq	CDS	1639784	1639999	.	-	0	ID=cds1452;Parent=gene1496;Dbxref=Genbank:YP_856036.1,GeneID:4487699;Name=YP_856036.1;Note=identified by match to protein family HMM PF04325;gbkey=CDS;product=hypothetical protein;protein_id=YP_856036.1;transl_table=11
NC_008570.1	RefSeq	gene	1640286	1640876	.	-	.	ID=gene1497;Dbxref=GeneID:4487700;Name=AHA_1499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1499
NC_008570.1	RefSeq	CDS	1640286	1640876	.	-	0	ID=cds1453;Parent=gene1497;Dbxref=Genbank:YP_856037.1,GeneID:4487700;Name=YP_856037.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856037.1;transl_table=11
NC_008570.1	RefSeq	gene	1640888	1642234	.	-	.	ID=gene1498;Dbxref=GeneID:4487701;Name=AHA_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1500
NC_008570.1	RefSeq	CDS	1640888	1642234	.	-	0	ID=cds1454;Parent=gene1498;Dbxref=Genbank:YP_856038.1,GeneID:4487701;Name=YP_856038.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=Na+ driven multidrug efflux pump;protein_id=YP_856038.1;transl_table=11
NC_008570.1	RefSeq	gene	1642381	1644204	.	-	.	ID=gene1499;Dbxref=GeneID:4487702;Name=AHA_1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1501
NC_008570.1	RefSeq	CDS	1642381	1644204	.	-	0	ID=cds1455;Parent=gene1499;Dbxref=Genbank:YP_856039.1,GeneID:4487702;Name=YP_856039.1;Note=identified by match to protein family HMM PF00916%3B match to protein family HMM PF01740;gbkey=CDS;product=sulfate permease;protein_id=YP_856039.1;transl_table=11
NC_008570.1	RefSeq	gene	1644275	1644895	.	-	.	ID=gene1500;Dbxref=GeneID:4487703;Name=AHA_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1502
NC_008570.1	RefSeq	CDS	1644275	1644895	.	-	0	ID=cds1456;Parent=gene1500;Dbxref=Genbank:YP_856040.1,GeneID:4487703;Name=YP_856040.1;Note=identified by match to protein family HMM PF06042;gbkey=CDS;product=hypothetical protein;protein_id=YP_856040.1;transl_table=11
NC_008570.1	RefSeq	gene	1644885	1645142	.	-	.	ID=gene1501;Dbxref=GeneID:4487576;Name=AHA_1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1503
NC_008570.1	RefSeq	CDS	1644885	1645142	.	-	0	ID=cds1457;Parent=gene1501;Dbxref=Genbank:YP_856041.1,GeneID:4487576;Name=YP_856041.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856041.1;transl_table=11
NC_008570.1	RefSeq	gene	1645277	1646182	.	+	.	ID=gene1502;Dbxref=GeneID:4487577;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AHA_1504
NC_008570.1	RefSeq	CDS	1645277	1646182	.	+	0	ID=cds1458;Parent=gene1502;Dbxref=Genbank:YP_856042.1,GeneID:4487577;Name=YP_856042.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=YP_856042.1;transl_table=11
NC_008570.1	RefSeq	gene	1646348	1646629	.	+	.	ID=gene1503;Dbxref=GeneID:4487578;Name=AHA_1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1505
NC_008570.1	RefSeq	CDS	1646348	1646629	.	+	0	ID=cds1459;Parent=gene1503;Dbxref=Genbank:YP_856043.1,GeneID:4487578;Name=YP_856043.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856043.1;transl_table=11
NC_008570.1	RefSeq	gene	1646663	1647847	.	-	.	ID=gene1504;Dbxref=GeneID:4487579;Name=AHA_1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1506
NC_008570.1	RefSeq	CDS	1646663	1647847	.	-	0	ID=cds1460;Parent=gene1504;Dbxref=Genbank:YP_856044.1,GeneID:4487579;Name=YP_856044.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=NAD-dependent methanol dehydrogenase;protein_id=YP_856044.1;transl_table=11
NC_008570.1	RefSeq	gene	1647865	1648380	.	-	.	ID=gene1505;Dbxref=GeneID:4487580;Name=AHA_1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1507
NC_008570.1	RefSeq	CDS	1647865	1648380	.	-	0	ID=cds1461;Parent=gene1505;Dbxref=Genbank:YP_856045.1,GeneID:4487580;Name=YP_856045.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856045.1;transl_table=11
NC_008570.1	RefSeq	gene	1648361	1648963	.	-	.	ID=gene1506;Dbxref=GeneID:4487581;Name=AHA_1508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1508
NC_008570.1	RefSeq	CDS	1648361	1648963	.	-	0	ID=cds1462;Parent=gene1506;Dbxref=Genbank:YP_856046.1,GeneID:4487581;Name=YP_856046.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_856046.1;transl_table=11
NC_008570.1	RefSeq	gene	1648974	1650404	.	-	.	ID=gene1507;Dbxref=GeneID:4487582;Name=AHA_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1509
NC_008570.1	RefSeq	CDS	1648974	1650404	.	-	0	ID=cds1463;Parent=gene1507;Dbxref=Genbank:YP_856047.1,GeneID:4487582;Name=YP_856047.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;product=coniferyl aldehyde dehydrogenase;protein_id=YP_856047.1;transl_table=11
NC_008570.1	RefSeq	gene	1650616	1650909	.	+	.	ID=gene1508;Dbxref=GeneID:4487583;Name=AHA_1510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1510
NC_008570.1	RefSeq	CDS	1650616	1650909	.	+	0	ID=cds1464;Parent=gene1508;Dbxref=Genbank:YP_856048.1,GeneID:4487583;Name=YP_856048.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856048.1;transl_table=11
NC_008570.1	RefSeq	gene	1650968	1651417	.	-	.	ID=gene1509;Dbxref=GeneID:4487584;Name=AHA_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1511
NC_008570.1	RefSeq	CDS	1650968	1651417	.	-	0	ID=cds1465;Parent=gene1509;Dbxref=Genbank:YP_856049.1,GeneID:4487584;Name=YP_856049.1;Note=identified by match to protein family HMM PF00877;gbkey=CDS;product=protein NlpC;protein_id=YP_856049.1;transl_table=11
NC_008570.1	RefSeq	gene	1652272	1654137	.	+	.	ID=gene1510;Dbxref=GeneID:4487585;Name=AHA_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1512
NC_008570.1	RefSeq	CDS	1652272	1654137	.	+	0	ID=cds1466;Parent=gene1510;Dbxref=Genbank:YP_856050.1,GeneID:4487585;Name=YP_856050.1;Note=identified by match to protein family HMM PF00652%3B match to protein family HMM PF07968;gbkey=CDS;product=hemolysin;protein_id=YP_856050.1;transl_table=11
NC_008570.1	RefSeq	gene	1654204	1655112	.	-	.	ID=gene1511;Dbxref=GeneID:4487586;Name=AHA_1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1513
NC_008570.1	RefSeq	CDS	1654204	1655112	.	-	0	ID=cds1467;Parent=gene1511;Dbxref=Genbank:YP_856051.1,GeneID:4487586;Name=YP_856051.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=hydrogen peroxide-inducible genes activator;protein_id=YP_856051.1;transl_table=11
NC_008570.1	RefSeq	gene	1655259	1655861	.	+	.	ID=gene1512;Dbxref=GeneID:4487587;Name=AHA_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1514
NC_008570.1	RefSeq	CDS	1655259	1655861	.	+	0	ID=cds1468;Parent=gene1512;Dbxref=Genbank:YP_856052.1,GeneID:4487587;Name=YP_856052.1;Note=identified by match to protein family HMM PF00578;gbkey=CDS;product=alkyl hydroperoxide reductase;protein_id=YP_856052.1;transl_table=11
NC_008570.1	RefSeq	gene	1655981	1656946	.	-	.	ID=gene1513;Dbxref=GeneID:4487588;Name=AHA_1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1515
NC_008570.1	RefSeq	CDS	1655981	1656946	.	-	0	ID=cds1469;Parent=gene1513;Dbxref=Genbank:YP_856053.1,GeneID:4487588;Name=YP_856053.1;Note=identified by match to protein family HMM TIGR02291;gbkey=CDS;product=alpha-L-glutamate ligase-like protein;protein_id=YP_856053.1;transl_table=11
NC_008570.1	RefSeq	gene	1656950	1658488	.	-	.	ID=gene1514;Dbxref=GeneID:4487589;Name=AHA_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1516
NC_008570.1	RefSeq	CDS	1656950	1658488	.	-	0	ID=cds1470;Parent=gene1514;Dbxref=Genbank:YP_856054.1,GeneID:4487589;Name=YP_856054.1;gbkey=CDS;product=gonadoliberin III-like protein;protein_id=YP_856054.1;transl_table=11
NC_008570.1	RefSeq	gene	1658492	1659208	.	-	.	ID=gene1515;Dbxref=GeneID:4487590;Name=AHA_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1517
NC_008570.1	RefSeq	CDS	1658492	1659208	.	-	0	ID=cds1471;Parent=gene1515;Dbxref=Genbank:YP_856055.1,GeneID:4487590;Name=YP_856055.1;Note=identified by match to protein family HMM PF05618;gbkey=CDS;product=ATP-dependent Zn proteases;protein_id=YP_856055.1;transl_table=11
NC_008570.1	RefSeq	gene	1659333	1660364	.	-	.	ID=gene1516;Dbxref=GeneID:4487591;Name=AHA_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1518
NC_008570.1	RefSeq	CDS	1659333	1660364	.	-	0	ID=cds1472;Parent=gene1516;Dbxref=Genbank:YP_856056.1,GeneID:4487591;Name=YP_856056.1;Note=identified by match to protein family HMM PF08003%3B match to protein family HMM TIGR00452;gbkey=CDS;product=methyltransferase;protein_id=YP_856056.1;transl_table=11
NC_008570.1	RefSeq	gene	1660307	1661056	.	-	.	ID=gene1517;Dbxref=GeneID:4487592;Name=AHA_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1519
NC_008570.1	RefSeq	CDS	1660307	1661056	.	-	0	ID=cds1473;Parent=gene1517;Dbxref=Genbank:YP_856057.1,GeneID:4487592;Name=YP_856057.1;Note=identified by match to protein family HMM TIGR00740;gbkey=CDS;product=methyltransferase;protein_id=YP_856057.1;transl_table=11
NC_008570.1	RefSeq	gene	1661450	1662298	.	-	.	ID=gene1518;Dbxref=GeneID:4487593;Name=AHA_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1520
NC_008570.1	RefSeq	CDS	1661450	1662298	.	-	0	ID=cds1474;Parent=gene1518;Dbxref=Genbank:YP_856058.1,GeneID:4487593;Name=YP_856058.1;Note=identified by match to protein family HMM PF01904;gbkey=CDS;product=hypothetical protein;protein_id=YP_856058.1;transl_table=11
NC_008570.1	RefSeq	gene	1662491	1664497	.	+	.	ID=gene1519;Dbxref=GeneID:4487594;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AHA_1521
NC_008570.1	RefSeq	CDS	1662491	1664497	.	+	0	ID=cds1475;Parent=gene1519;Dbxref=Genbank:YP_856059.1,GeneID:4487594;Name=YP_856059.1;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=YP_856059.1;transl_table=11
NC_008570.1	RefSeq	gene	1664593	1665333	.	+	.	ID=gene1520;Dbxref=GeneID:4487212;Name=AHA_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1522
NC_008570.1	RefSeq	CDS	1664593	1665333	.	+	0	ID=cds1476;Parent=gene1520;Dbxref=Genbank:YP_856060.1,GeneID:4487212;Name=YP_856060.1;Note=identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;product=hypothetical protein;protein_id=YP_856060.1;transl_table=11
NC_008570.1	RefSeq	gene	1665616	1667232	.	+	.	ID=gene1521;Dbxref=GeneID:4487213;Name=AHA_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1523
NC_008570.1	RefSeq	CDS	1665616	1667232	.	+	0	ID=cds1477;Parent=gene1521;Dbxref=Genbank:YP_856061.1,GeneID:4487213;Name=YP_856061.1;Note=identified by match to protein family HMM PF00884%3B match to protein family HMM PF08019;gbkey=CDS;product=integral membrane protein;protein_id=YP_856061.1;transl_table=11
NC_008570.1	RefSeq	gene	1667470	1668747	.	-	.	ID=gene1522;Dbxref=GeneID:4487214;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;locus_tag=AHA_1524
NC_008570.1	RefSeq	CDS	1667470	1668747	.	-	0	ID=cds1478;Parent=gene1522;Dbxref=Genbank:YP_856062.1,GeneID:4487214;Name=YP_856062.1;Note=identified by similarity to SP:P15301%3B match to protein family HMM PF00480;gbkey=CDS;gene=nagC;product=N-acetylglucosamine repressor;protein_id=YP_856062.1;transl_table=11
NC_008570.1	RefSeq	gene	1668689	1669834	.	-	.	ID=gene1523;Dbxref=GeneID:4487215;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AHA_1525
NC_008570.1	RefSeq	CDS	1668689	1669834	.	-	0	ID=cds1479;Parent=gene1523;Dbxref=Genbank:YP_856063.1,GeneID:4487215;Name=YP_856063.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_856063.1;transl_table=11
NC_008570.1	RefSeq	gene	1669844	1670644	.	-	.	ID=gene1524;Dbxref=GeneID:4487216;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AHA_1526
NC_008570.1	RefSeq	CDS	1669844	1670644	.	-	0	ID=cds1480;Parent=gene1524;Dbxref=Genbank:YP_856064.1,GeneID:4487216;Name=YP_856064.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=YP_856064.1;transl_table=11
NC_008570.1	RefSeq	gene	1670918	1672372	.	+	.	ID=gene1525;Dbxref=GeneID:4487217;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AHA_1527
NC_008570.1	RefSeq	CDS	1670918	1672372	.	+	0	ID=cds1481;Parent=gene1525;Dbxref=Genbank:YP_856065.1,GeneID:4487217;Name=YP_856065.1;Note=identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01998;gbkey=CDS;gene=nagE;product=pts system%2C N-acetylglucosamine-specific IIBC component;protein_id=YP_856065.1;transl_table=11
NC_008570.1	RefSeq	gene	1672495	1675158	.	+	.	ID=gene1526;Dbxref=GeneID:4487218;Name=AHA_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1528
NC_008570.1	RefSeq	CDS	1672495	1675158	.	+	0	ID=cds1482;Parent=gene1526;Dbxref=Genbank:YP_856066.1,GeneID:4487218;Name=YP_856066.1;Note=identified by match to protein family HMM PF00728%3B match to protein family HMM PF03173%3B match to protein family HMM PF03174;gbkey=CDS;product=chitobiase;protein_id=YP_856066.1;transl_table=11
NC_008570.1	RefSeq	gene	1675508	1677169	.	+	.	ID=gene1527;Dbxref=GeneID:4487219;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AHA_1529
NC_008570.1	RefSeq	CDS	1675508	1677169	.	+	0	ID=cds1483;Parent=gene1527;Dbxref=Genbank:YP_856067.1,GeneID:4487219;Name=YP_856067.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glnS;product=glutaminyl-tRNA synthetase;protein_id=YP_856067.1;transl_table=11
NC_008570.1	RefSeq	gene	1677303	1677731	.	-	.	ID=gene1528;Dbxref=GeneID:4487220;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AHA_1530
NC_008570.1	RefSeq	CDS	1677303	1677731	.	-	0	ID=cds1484;Parent=gene1528;Dbxref=Genbank:YP_856068.1,GeneID:4487220;Name=YP_856068.1;Note=identified by similarity to SP:P0A9A9%3B match to protein family HMM PF01475;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=YP_856068.1;transl_table=11
NC_008570.1	RefSeq	gene	1677967	1678458	.	+	.	ID=gene1529;Dbxref=GeneID:4487221;Name=AHA_1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1531
NC_008570.1	RefSeq	CDS	1677967	1678458	.	+	0	ID=cds1485;Parent=gene1529;Dbxref=Genbank:YP_856069.1,GeneID:4487221;Name=YP_856069.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856069.1;transl_table=11
NC_008570.1	RefSeq	gene	1678519	1679043	.	-	.	ID=gene1530;Dbxref=GeneID:4487222;Name=AHA_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1532
NC_008570.1	RefSeq	CDS	1678519	1679043	.	-	0	ID=cds1486;Parent=gene1530;Dbxref=Genbank:YP_856070.1,GeneID:4487222;Name=YP_856070.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01752;gbkey=CDS;product=flavodoxin;protein_id=YP_856070.1;transl_table=11
NC_008570.1	RefSeq	gene	1679083	1679379	.	-	.	ID=gene1531;Dbxref=GeneID:4487223;Name=AHA_1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1533
NC_008570.1	RefSeq	CDS	1679083	1679379	.	-	0	ID=cds1487;Parent=gene1531;Dbxref=Genbank:YP_856071.1,GeneID:4487223;Name=YP_856071.1;gbkey=CDS;product=LexA regulated protein;protein_id=YP_856071.1;transl_table=11
NC_008570.1	RefSeq	gene	1679400	1679621	.	-	.	ID=gene1532;Dbxref=GeneID:4487224;Name=AHA_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1534
NC_008570.1	RefSeq	CDS	1679400	1679621	.	-	0	ID=cds1488;Parent=gene1532;Dbxref=Genbank:YP_856072.1,GeneID:4487224;Name=YP_856072.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856072.1;transl_table=11
NC_008570.1	RefSeq	gene	1679677	1680447	.	-	.	ID=gene1533;Dbxref=GeneID:4487225;Name=AHA_1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1535
NC_008570.1	RefSeq	CDS	1679677	1680447	.	-	0	ID=cds1489;Parent=gene1533;Dbxref=Genbank:YP_856073.1,GeneID:4487225;Name=YP_856073.1;Note=identified by match to protein family HMM PF00561%3B match to protein family HMM PF07819;gbkey=CDS;product=esterase YbfF;protein_id=YP_856073.1;transl_table=11
NC_008570.1	RefSeq	gene	1680556	1681248	.	+	.	ID=gene1534;Dbxref=GeneID:4487226;Name=AHA_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1536
NC_008570.1	RefSeq	CDS	1680556	1681248	.	+	0	ID=cds1490;Parent=gene1534;Dbxref=Genbank:YP_856074.1,GeneID:4487226;Name=YP_856074.1;Note=identified by match to protein family HMM PF03925;gbkey=CDS;product=SeqA protein;protein_id=YP_856074.1;transl_table=11
NC_008570.1	RefSeq	gene	1681306	1682955	.	+	.	ID=gene1535;Dbxref=GeneID:4487227;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AHA_1537
NC_008570.1	RefSeq	CDS	1681306	1682955	.	+	0	ID=cds1491;Parent=gene1535;Dbxref=Genbank:YP_856075.1,GeneID:4487227;Name=YP_856075.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=YP_856075.1;transl_table=11
NC_008570.1	RefSeq	gene	1683040	1683921	.	-	.	ID=gene1536;Dbxref=GeneID:4487228;Name=AHA_1538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1538
NC_008570.1	RefSeq	CDS	1683040	1683921	.	-	0	ID=cds1492;Parent=gene1536;Dbxref=Genbank:YP_856076.1,GeneID:4487228;Name=YP_856076.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family transporter;protein_id=YP_856076.1;transl_table=11
NC_008570.1	RefSeq	gene	1684018	1684500	.	+	.	ID=gene1537;Dbxref=GeneID:4487229;Name=AHA_1539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1539
NC_008570.1	RefSeq	CDS	1684018	1684500	.	+	0	ID=cds1493;Parent=gene1537;Dbxref=Genbank:YP_856077.1,GeneID:4487229;Name=YP_856077.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_856077.1;transl_table=11
NC_008570.1	RefSeq	gene	1684525	1685235	.	-	.	ID=gene1538;Dbxref=GeneID:4487230;Name=AHA_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1540
NC_008570.1	RefSeq	CDS	1684525	1685235	.	-	0	ID=cds1494;Parent=gene1538;Dbxref=Genbank:YP_856078.1,GeneID:4487230;Name=YP_856078.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_856078.1;transl_table=11
NC_008570.1	RefSeq	gene	1685228	1685893	.	+	.	ID=gene1539;Dbxref=GeneID:4487231;Name=AHA_1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1541
NC_008570.1	RefSeq	CDS	1685228	1685893	.	+	0	ID=cds1495;Parent=gene1539;Dbxref=Genbank:YP_856079.1,GeneID:4487231;Name=YP_856079.1;Note=identified by match to protein family HMM PF00578;gbkey=CDS;product=AhpC/Tsa family protein;protein_id=YP_856079.1;transl_table=11
NC_008570.1	RefSeq	gene	1685971	1687074	.	-	.	ID=gene1540;Dbxref=GeneID:4487017;Name=mltB-1;gbkey=Gene;gene=mltB-1;gene_biotype=protein_coding;locus_tag=AHA_1542
NC_008570.1	RefSeq	CDS	1685971	1687074	.	-	0	ID=cds1496;Parent=gene1540;Dbxref=Genbank:YP_856080.1,GeneID:4487017;Name=YP_856080.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;gene=mltB-1;product=murein hydrolase B;protein_id=YP_856080.1;transl_table=11
NC_008570.1	RefSeq	gene	1687170	1687772	.	-	.	ID=gene1541;Dbxref=GeneID:4487018;Name=AHA_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1543
NC_008570.1	RefSeq	CDS	1687170	1687772	.	-	0	ID=cds1497;Parent=gene1541;Dbxref=Genbank:YP_856081.1,GeneID:4487018;Name=YP_856081.1;Note=identified by match to protein family HMM PF01066;gbkey=CDS;product=phosphatidylglycerophosphate synthase;protein_id=YP_856081.1;transl_table=11
NC_008570.1	RefSeq	gene	1687787	1688425	.	-	.	ID=gene1542;Dbxref=GeneID:4487019;Name=AHA_1544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1544
NC_008570.1	RefSeq	CDS	1687787	1688425	.	-	0	ID=cds1498;Parent=gene1542;Dbxref=Genbank:YP_856082.1,GeneID:4487019;Name=YP_856082.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_856082.1;transl_table=11
NC_008570.1	RefSeq	gene	1688449	1690125	.	-	.	ID=gene1543;Dbxref=GeneID:4487020;Name=AHA_1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1545
NC_008570.1	RefSeq	CDS	1688449	1690125	.	-	0	ID=cds1499;Parent=gene1543;Dbxref=Genbank:YP_856083.1,GeneID:4487020;Name=YP_856083.1;gbkey=CDS;product=inner membrane ABC transporter permease YnjC;protein_id=YP_856083.1;transl_table=11
NC_008570.1	RefSeq	gene	1690125	1691405	.	-	.	ID=gene1544;Dbxref=GeneID:4487021;Name=AHA_1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1546
NC_008570.1	RefSeq	CDS	1690125	1691405	.	-	0	ID=cds1500;Parent=gene1544;Dbxref=Genbank:YP_856084.1,GeneID:4487021;Name=YP_856084.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_856084.1;transl_table=11
NC_008570.1	RefSeq	gene	1691315	1693483	.	-	.	ID=gene1545;Dbxref=GeneID:4487022;Name=AHA_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1547
NC_008570.1	RefSeq	CDS	1691315	1693483	.	-	0	ID=cds1501;Parent=gene1545;Dbxref=Genbank:YP_856085.1,GeneID:4487022;Name=YP_856085.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;product=mercuric reductase%2C membrane-associated;protein_id=YP_856085.1;transl_table=11
NC_008570.1	RefSeq	gene	1693483	1694064	.	-	.	ID=gene1546;Dbxref=GeneID:4487023;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=AHA_1548
NC_008570.1	RefSeq	CDS	1693483	1694064	.	-	0	ID=cds1502;Parent=gene1546;Dbxref=Genbank:YP_856086.1,GeneID:4487023;Name=YP_856086.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;gene=pcaC;product=hypothetical protein;protein_id=YP_856086.1;transl_table=11
NC_008570.1	RefSeq	gene	1694076	1694750	.	-	.	ID=gene1547;Dbxref=GeneID:4487024;Name=AHA_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1549
NC_008570.1	RefSeq	CDS	1694076	1694750	.	-	0	ID=cds1503;Parent=gene1547;Dbxref=Genbank:YP_856087.1,GeneID:4487024;Name=YP_856087.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856087.1;transl_table=11
NC_008570.1	RefSeq	gene	1694802	1695362	.	+	.	ID=gene1548;Dbxref=GeneID:4487025;Name=AHA_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1550
NC_008570.1	RefSeq	CDS	1694802	1695362	.	+	0	ID=cds1504;Parent=gene1548;Dbxref=Genbank:YP_856088.1,GeneID:4487025;Name=YP_856088.1;Note=identified by match to protein family HMM PF01625;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=YP_856088.1;transl_table=11
NC_008570.1	RefSeq	gene	1695377	1695655	.	-	.	ID=gene1549;Dbxref=GeneID:4487026;Name=AHA_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1551
NC_008570.1	RefSeq	CDS	1695377	1695655	.	-	0	ID=cds1505;Parent=gene1549;Dbxref=Genbank:YP_856089.1,GeneID:4487026;Name=YP_856089.1;Note=identified by match to protein family HMM PF00639;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase C;protein_id=YP_856089.1;transl_table=11
NC_008570.1	RefSeq	gene	1695737	1696111	.	-	.	ID=gene1550;Dbxref=GeneID:4487027;Name=AHA_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1552
NC_008570.1	RefSeq	CDS	1695737	1696111	.	-	0	ID=cds1506;Parent=gene1550;Dbxref=Genbank:YP_856090.1,GeneID:4487027;Name=YP_856090.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856090.1;transl_table=11
NC_008570.1	RefSeq	gene	1696686	1698461	.	+	.	ID=gene1551;Dbxref=GeneID:4487028;Name=AHA_1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1553
NC_008570.1	RefSeq	CDS	1696686	1698461	.	+	0	ID=cds1507;Parent=gene1551;Dbxref=Genbank:YP_856091.1,GeneID:4487028;Name=YP_856091.1;Note=identified by match to protein family HMM PF01103;gbkey=CDS;product=OMP85 family outer membrane protein;protein_id=YP_856091.1;transl_table=11
NC_008570.1	RefSeq	gene	1698541	1702296	.	+	.	ID=gene1552;Dbxref=GeneID:4487029;Name=AHA_1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1554
NC_008570.1	RefSeq	CDS	1698541	1702296	.	+	0	ID=cds1508;Parent=gene1552;Dbxref=Genbank:YP_856092.1,GeneID:4487029;Name=YP_856092.1;Note=identified by match to protein family HMM PF04357;gbkey=CDS;product=hypothetical protein;protein_id=YP_856092.1;transl_table=11
NC_008570.1	RefSeq	gene	1702438	1702522	.	-	.	ID=gene1553;Dbxref=GeneID:4487030;Name=AHA_1555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1555
NC_008570.1	RefSeq	tRNA	1702438	1702522	.	-	.	ID=rna43;Parent=gene1553;Dbxref=GeneID:4487030;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	1702438	1702522	.	-	.	ID=id44;Parent=rna43;Dbxref=GeneID:4487030;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	1702574	1702658	.	-	.	ID=gene1554;Dbxref=GeneID:4487031;Name=AHA_1556;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1556
NC_008570.1	RefSeq	tRNA	1702574	1702658	.	-	.	ID=rna44;Parent=gene1554;Dbxref=GeneID:4487031;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	1702574	1702658	.	-	.	ID=id45;Parent=rna44;Dbxref=GeneID:4487031;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	1702784	1703299	.	+	.	ID=gene1555;Dbxref=GeneID:4487032;Name=AHA_1557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1557
NC_008570.1	RefSeq	CDS	1702784	1703299	.	+	0	ID=cds1509;Parent=gene1555;Dbxref=Genbank:YP_856093.1,GeneID:4487032;Name=YP_856093.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856093.1;transl_table=11
NC_008570.1	RefSeq	gene	1703381	1703719	.	-	.	ID=gene1556;Dbxref=GeneID:4487033;Name=yfiA-1;gbkey=Gene;gene=yfiA-1;gene_biotype=protein_coding;locus_tag=AHA_1558
NC_008570.1	RefSeq	CDS	1703381	1703719	.	-	0	ID=cds1510;Parent=gene1556;Dbxref=Genbank:YP_856094.1,GeneID:4487033;Name=YP_856094.1;Note=identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=yfiA-1;product=ribosomal subunit interface protein;protein_id=YP_856094.1;transl_table=11
NC_008570.1	RefSeq	gene	1704091	1706607	.	+	.	ID=gene1557;Dbxref=GeneID:4487034;Name=AHA_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1559
NC_008570.1	RefSeq	CDS	1704091	1706607	.	+	0	ID=cds1511;Parent=gene1557;Dbxref=Genbank:YP_856095.1,GeneID:4487034;Name=YP_856095.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=protein MorA;protein_id=YP_856095.1;transl_table=11
NC_008570.1	RefSeq	gene	1706692	1708608	.	+	.	ID=gene1558;Dbxref=GeneID:4487035;Name=slt;gbkey=Gene;gene=slt;gene_biotype=protein_coding;locus_tag=AHA_1560
NC_008570.1	RefSeq	CDS	1706692	1708608	.	+	0	ID=cds1512;Parent=gene1558;Dbxref=Genbank:YP_856096.1,GeneID:4487035;Name=YP_856096.1;Note=identified by similarity to SP:P03810%3B match to protein family HMM PF01464;gbkey=CDS;gene=slt;product=soluble lytic murein transglycosylase;protein_id=YP_856096.1;transl_table=11
NC_008570.1	RefSeq	gene	1708788	1709786	.	+	.	ID=gene1559;Dbxref=GeneID:4487036;Name=AHA_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1561
NC_008570.1	RefSeq	CDS	1708788	1709786	.	+	0	ID=cds1513;Parent=gene1559;Dbxref=Genbank:YP_856097.1,GeneID:4487036;Name=YP_856097.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=HTH-type transcriptional regulator GalR;protein_id=YP_856097.1;transl_table=11
NC_008570.1	RefSeq	gene	1710045	1710857	.	+	.	ID=gene1560;Dbxref=GeneID:4487037;Name=AHA_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1562
NC_008570.1	RefSeq	CDS	1710045	1710857	.	+	0	ID=cds1514;Parent=gene1560;Dbxref=Genbank:YP_856098.1,GeneID:4487037;Name=YP_856098.1;Note=identified by match to protein family HMM PF01370;gbkey=CDS;product=NAD dependent epimerase/dehydratase family protein;protein_id=YP_856098.1;transl_table=11
NC_008570.1	RefSeq	gene	1710900	1711382	.	+	.	ID=gene1561;Dbxref=GeneID:4487038;Name=AHA_1563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1563
NC_008570.1	RefSeq	CDS	1710900	1711382	.	+	0	ID=cds1515;Parent=gene1561;Dbxref=Genbank:YP_856099.1,GeneID:4487038;Name=YP_856099.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_856099.1;transl_table=11
NC_008570.1	RefSeq	gene	1711389	1711679	.	-	.	ID=gene1562;Dbxref=GeneID:4487039;Name=AHA_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1564
NC_008570.1	RefSeq	CDS	1711389	1711679	.	-	0	ID=cds1516;Parent=gene1562;Dbxref=Genbank:YP_856100.1,GeneID:4487039;Name=YP_856100.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856100.1;transl_table=11
NC_008570.1	RefSeq	gene	1711725	1712570	.	+	.	ID=gene1563;Dbxref=GeneID:4487040;Name=AHA_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1565
NC_008570.1	RefSeq	CDS	1711725	1712570	.	+	0	ID=cds1517;Parent=gene1563;Dbxref=Genbank:YP_856101.1,GeneID:4487040;Name=YP_856101.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=endonuclease/exonuclease/phosphatase family protein;protein_id=YP_856101.1;transl_table=11
NC_008570.1	RefSeq	gene	1712657	1714204	.	-	.	ID=gene1564;Dbxref=GeneID:4487041;Name=AHA_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1566
NC_008570.1	RefSeq	CDS	1712657	1714204	.	-	0	ID=cds1518;Parent=gene1564;Dbxref=Genbank:YP_856102.1,GeneID:4487041;Name=YP_856102.1;Note=identified by match to protein family HMM PF01464%3B match to protein family HMM PF01476%3B match to protein family HMM PF06474;gbkey=CDS;product=membrane-bound lytic murein transglycosylase D;protein_id=YP_856102.1;transl_table=11
NC_008570.1	RefSeq	gene	1714275	1715039	.	-	.	ID=gene1565;Dbxref=GeneID:4487042;Name=AHA_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1567
NC_008570.1	RefSeq	CDS	1714275	1715039	.	-	0	ID=cds1519;Parent=gene1565;Dbxref=Genbank:YP_856103.1,GeneID:4487042;Name=YP_856103.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=YP_856103.1;transl_table=11
NC_008570.1	RefSeq	gene	1715099	1715833	.	+	.	ID=gene1566;Dbxref=GeneID:4487043;Name=AHA_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1569
NC_008570.1	RefSeq	CDS	1715099	1715833	.	+	0	ID=cds1520;Parent=gene1566;Dbxref=Genbank:YP_856104.1,GeneID:4487043;Name=YP_856104.1;gbkey=CDS;product=methyltransferase;protein_id=YP_856104.1;transl_table=11
NC_008570.1	RefSeq	gene	1715821	1716285	.	-	.	ID=gene1567;Dbxref=GeneID:4487044;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AHA_1568
NC_008570.1	RefSeq	CDS	1715821	1716285	.	-	0	ID=cds1521;Parent=gene1567;Dbxref=Genbank:YP_856105.1,GeneID:4487044;Name=YP_856105.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhA;product=ribonuclease H;protein_id=YP_856105.1;transl_table=11
NC_008570.1	RefSeq	gene	1716338	1717072	.	+	.	ID=gene1568;Dbxref=GeneID:4487045;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AHA_1570
NC_008570.1	RefSeq	CDS	1716338	1717072	.	+	0	ID=cds1522;Parent=gene1568;Dbxref=Genbank:YP_856106.1,GeneID:4487045;Name=YP_856106.1;Note=identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01406;gbkey=CDS;gene=dnaQ;product=DNA polymerase III subunit epsilon;protein_id=YP_856106.1;transl_table=11
NC_008570.1	RefSeq	gene	1717069	1718334	.	+	.	ID=gene1569;Dbxref=GeneID:4487046;Name=AHA_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1571
NC_008570.1	RefSeq	CDS	1717069	1718334	.	+	0	ID=cds1523;Parent=gene1569;Dbxref=Genbank:YP_856107.1,GeneID:4487046;Name=YP_856107.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856107.1;transl_table=11
NC_008570.1	RefSeq	gene	1718416	1719933	.	-	.	ID=gene1570;Dbxref=GeneID:4487047;Name=AHA_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1572
NC_008570.1	RefSeq	CDS	1718416	1719933	.	-	0	ID=cds1524;Parent=gene1570;Dbxref=Genbank:YP_856108.1,GeneID:4487047;Name=YP_856108.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=YP_856108.1;transl_table=11
NC_008570.1	RefSeq	gene	1720100	1722556	.	-	.	ID=gene1571;Dbxref=GeneID:4487048;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AHA_1573
NC_008570.1	RefSeq	CDS	1720100	1722556	.	-	0	ID=cds1525;Parent=gene1571;Dbxref=Genbank:YP_856109.1,GeneID:4487048;Name=YP_856109.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=YP_856109.1;transl_table=11
NC_008570.1	RefSeq	gene	1722801	1723379	.	+	.	ID=gene1572;Dbxref=GeneID:4487049;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AHA_1574
NC_008570.1	RefSeq	CDS	1722801	1723379	.	+	0	ID=cds1526;Parent=gene1572;Dbxref=Genbank:YP_856110.1,GeneID:4487049;Name=YP_856110.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=YP_856110.1;transl_table=11
NC_008570.1	RefSeq	gene	1723519	1724298	.	+	.	ID=gene1573;Dbxref=GeneID:4487050;Name=AHA_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1575
NC_008570.1	RefSeq	CDS	1723519	1724298	.	+	0	ID=cds1527;Parent=gene1573;Dbxref=Genbank:YP_856111.1,GeneID:4487050;Name=YP_856111.1;Note=identified by match to protein family HMM PF00310;gbkey=CDS;product=class-II glutamine amidotransferase;protein_id=YP_856111.1;transl_table=11
NC_008570.1	RefSeq	gene	1724620	1724955	.	+	.	ID=gene1574;Dbxref=GeneID:4487051;Name=AHA_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1576
NC_008570.1	RefSeq	CDS	1724620	1724955	.	+	0	ID=cds1528;Parent=gene1574;Dbxref=Genbank:YP_856112.1,GeneID:4487051;Name=YP_856112.1;Note=identified by match to protein family HMM PF01627;gbkey=CDS;product=Hpt domain-containing protein;protein_id=YP_856112.1;transl_table=11
NC_008570.1	RefSeq	gene	1725007	1725918	.	-	.	ID=gene1575;Dbxref=GeneID:4487052;Name=AHA_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1577
NC_008570.1	RefSeq	CDS	1725007	1725918	.	-	0	ID=cds1529;Parent=gene1575;Dbxref=Genbank:YP_856113.1,GeneID:4487052;Name=YP_856113.1;Note=identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826;gbkey=CDS;product=hypothetical protein;protein_id=YP_856113.1;transl_table=11
NC_008570.1	RefSeq	gene	1726032	1727216	.	+	.	ID=gene1576;Dbxref=GeneID:4487053;Name=AHA_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1578
NC_008570.1	RefSeq	CDS	1726032	1727216	.	+	0	ID=cds1530;Parent=gene1576;Dbxref=Genbank:YP_856114.1,GeneID:4487053;Name=YP_856114.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856114.1;transl_table=11
NC_008570.1	RefSeq	gene	1727358	1729331	.	+	.	ID=gene1577;Dbxref=GeneID:4487054;Name=AHA_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1579
NC_008570.1	RefSeq	CDS	1727358	1729331	.	+	0	ID=cds1531;Parent=gene1577;Dbxref=Genbank:YP_856115.1,GeneID:4487054;Name=YP_856115.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=sensor protein LuxQ;protein_id=YP_856115.1;transl_table=11
NC_008570.1	RefSeq	gene	1729559	1730134	.	-	.	ID=gene1578;Dbxref=GeneID:4487055;Name=AHA_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1580
NC_008570.1	RefSeq	CDS	1729559	1730134	.	-	0	ID=cds1532;Parent=gene1578;Dbxref=Genbank:YP_856116.1,GeneID:4487055;Name=YP_856116.1;Note=identified by match to protein family HMM PF02190;gbkey=CDS;product=ATP-dependent protease La;protein_id=YP_856116.1;transl_table=11
NC_008570.1	RefSeq	gene	1730239	1730877	.	-	.	ID=gene1579;Dbxref=GeneID:4486846;Name=AHA_1581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1581
NC_008570.1	RefSeq	CDS	1730239	1730877	.	-	0	ID=cds1533;Parent=gene1579;Dbxref=Genbank:YP_856117.1,GeneID:4486846;Name=YP_856117.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF04545;gbkey=CDS;product=LuxR family DNA-binding response regulator;protein_id=YP_856117.1;transl_table=11
NC_008570.1	RefSeq	gene	1730877	1732589	.	-	.	ID=gene1580;Dbxref=GeneID:4486847;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AHA_1582
NC_008570.1	RefSeq	CDS	1730877	1732589	.	-	0	ID=cds1534;Parent=gene1580;Dbxref=Genbank:YP_856118.1,GeneID:4486847;Name=YP_856118.1;Note=identified by similarity to SP:P27896%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;gene=narQ;product=nitrate/nitrite sensor protein NarQ;protein_id=YP_856118.1;transl_table=11
NC_008570.1	RefSeq	gene	1732763	1733791	.	+	.	ID=gene1581;Dbxref=GeneID:4486848;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AHA_1583
NC_008570.1	RefSeq	CDS	1732763	1733791	.	+	0	ID=cds1535;Parent=gene1581;Dbxref=Genbank:YP_856119.1,GeneID:4486848;Name=YP_856119.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=YP_856119.1;transl_table=11
NC_008570.1	RefSeq	gene	1734041	1734550	.	+	.	ID=gene1582;Dbxref=GeneID:4486849;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AHA_1584
NC_008570.1	RefSeq	CDS	1734041	1734550	.	+	0	ID=cds1536;Parent=gene1582;Dbxref=Genbank:YP_856120.1,GeneID:4486849;Name=YP_856120.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR00402;gbkey=CDS;gene=napF;product=ferredoxin-type protein NapF;protein_id=YP_856120.1;transl_table=11
NC_008570.1	RefSeq	gene	1734580	1734843	.	+	.	ID=gene1583;Dbxref=GeneID:4486850;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AHA_1585
NC_008570.1	RefSeq	CDS	1734580	1734843	.	+	0	ID=cds1537;Parent=gene1583;Dbxref=Genbank:YP_856121.1,GeneID:4486850;Name=YP_856121.1;Note=identified by match to protein family HMM PF03927;gbkey=CDS;gene=napD;product=NapD protein;protein_id=YP_856121.1;transl_table=11
NC_008570.1	RefSeq	gene	1734992	1737481	.	+	.	ID=gene1584;Dbxref=GeneID:4486851;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AHA_1586
NC_008570.1	RefSeq	CDS	1734992	1737481	.	+	0	ID=cds1538;Parent=gene1584;Dbxref=Genbank:YP_856122.1,GeneID:4486851;Name=YP_856122.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;gene=napA;product=nitrate reductase catalytic subunit;protein_id=YP_856122.1;transl_table=11
NC_008570.1	RefSeq	gene	1737498	1738232	.	+	.	ID=gene1585;Dbxref=GeneID:4486852;Name=AHA_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1587
NC_008570.1	RefSeq	CDS	1737498	1738232	.	+	0	ID=cds1539;Parent=gene1585;Dbxref=Genbank:YP_856123.1,GeneID:4486852;Name=YP_856123.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR00397;gbkey=CDS;product=MauM/NapG ferredoxin-type protein;protein_id=YP_856123.1;transl_table=11
NC_008570.1	RefSeq	gene	1738229	1739104	.	+	.	ID=gene1586;Dbxref=GeneID:4486853;Name=AHA_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1588
NC_008570.1	RefSeq	CDS	1738229	1739104	.	+	0	ID=cds1540;Parent=gene1586;Dbxref=Genbank:YP_856124.1,GeneID:4486853;Name=YP_856124.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR02163;gbkey=CDS;product=ferredoxin-type protein NapH;protein_id=YP_856124.1;transl_table=11
NC_008570.1	RefSeq	gene	1739104	1739559	.	+	.	ID=gene1587;Dbxref=GeneID:4486854;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AHA_1589
NC_008570.1	RefSeq	CDS	1739104	1739559	.	+	0	ID=cds1541;Parent=gene1587;Dbxref=Genbank:YP_856125.1,GeneID:4486854;Name=YP_856125.1;Note=identified by match to protein family HMM PF03892;gbkey=CDS;gene=napB;product=periplasmic nitrate reductase%2C diheme cytochrome c subunit;protein_id=YP_856125.1;transl_table=11
NC_008570.1	RefSeq	gene	1739571	1740161	.	+	.	ID=gene1588;Dbxref=GeneID:4486855;Name=AHA_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1590
NC_008570.1	RefSeq	CDS	1739571	1740161	.	+	0	ID=cds1542;Parent=gene1588;Dbxref=Genbank:YP_856126.1,GeneID:4486855;Name=YP_856126.1;Note=identified by match to protein family HMM PF03264%3B match to protein family HMM TIGR02161;gbkey=CDS;product=cytochrome c-type protein NapC;protein_id=YP_856126.1;transl_table=11
NC_008570.1	RefSeq	gene	1740424	1740930	.	+	.	ID=gene1589;Dbxref=GeneID:4486856;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AHA_1591
NC_008570.1	RefSeq	CDS	1740424	1740930	.	+	0	ID=cds1543;Parent=gene1589;Dbxref=Genbank:YP_856127.1,GeneID:4486856;Name=YP_856127.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177%3B match to protein family HMM TIGR02667;gbkey=CDS;gene=moaB;product=molybdenum cofactor biosynthesis protein B;protein_id=YP_856127.1;transl_table=11
NC_008570.1	RefSeq	gene	1740940	1741464	.	+	.	ID=gene1590;Dbxref=GeneID:4486857;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AHA_1592
NC_008570.1	RefSeq	CDS	1740940	1741464	.	+	0	ID=cds1544;Parent=gene1590;Dbxref=Genbank:YP_856128.1,GeneID:4486857;Name=YP_856128.1;Note=identified by similarity to SP:P0A738%3B match to protein family HMM PF01967%3B match to protein family HMM TIGR00581;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein C;protein_id=YP_856128.1;transl_table=11
NC_008570.1	RefSeq	gene	1741461	1741706	.	+	.	ID=gene1591;Dbxref=GeneID:4486858;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AHA_1593
NC_008570.1	RefSeq	CDS	1741461	1741706	.	+	0	ID=cds1545;Parent=gene1591;Dbxref=Genbank:YP_856129.1,GeneID:4486858;Name=YP_856129.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=YP_856129.1;transl_table=11
NC_008570.1	RefSeq	gene	1741709	1742182	.	+	.	ID=gene1592;Dbxref=GeneID:4486859;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AHA_1594
NC_008570.1	RefSeq	CDS	1741709	1742182	.	+	0	ID=cds1546;Parent=gene1592;Dbxref=Genbank:YP_856130.1,GeneID:4486859;Name=YP_856130.1;Note=identified by similarity to SP:P30749%3B match to protein family HMM PF02391;gbkey=CDS;gene=moaE;product=molybdopterin converting factor subunit 2;protein_id=YP_856130.1;transl_table=11
NC_008570.1	RefSeq	gene	1742285	1743013	.	+	.	ID=gene1593;Dbxref=GeneID:4486860;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AHA_1595
NC_008570.1	RefSeq	CDS	1742285	1743013	.	+	0	ID=cds1547;Parent=gene1593;Dbxref=Genbank:YP_856131.1,GeneID:4486860;Name=YP_856131.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR01256;gbkey=CDS;gene=modA;product=molybdate ABC transporter periplasmic molybdate-binding protein;protein_id=YP_856131.1;transl_table=11
NC_008570.1	RefSeq	gene	1743237	1743917	.	+	.	ID=gene1594;Dbxref=GeneID:4486861;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AHA_1596
NC_008570.1	RefSeq	CDS	1743237	1743917	.	+	0	ID=cds1548;Parent=gene1594;Dbxref=Genbank:YP_856132.1,GeneID:4486861;Name=YP_856132.1;Note=identified by similarity to SP:P37731%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR02141;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=YP_856132.1;transl_table=11
NC_008570.1	RefSeq	gene	1743914	1744990	.	+	.	ID=gene1595;Dbxref=GeneID:4486862;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AHA_1597
NC_008570.1	RefSeq	CDS	1743914	1744990	.	+	0	ID=cds1549;Parent=gene1595;Dbxref=Genbank:YP_856133.1,GeneID:4486862;Name=YP_856133.1;Note=identified by similarity to SP:P37732%3B match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM TIGR02142;gbkey=CDS;gene=modC;product=molybdate ABC transporter ATP-binding protein;protein_id=YP_856133.1;transl_table=11
NC_008570.1	RefSeq	gene	1745073	1745831	.	+	.	ID=gene1596;Dbxref=GeneID:4486863;Name=AHA_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1598
NC_008570.1	RefSeq	CDS	1745073	1745831	.	+	0	ID=cds1550;Parent=gene1596;Dbxref=Genbank:YP_856134.1,GeneID:4486863;Name=YP_856134.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_856134.1;transl_table=11
NC_008570.1	RefSeq	gene	1745917	1746672	.	-	.	ID=gene1597;Dbxref=GeneID:4486864;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AHA_1599
NC_008570.1	RefSeq	CDS	1745917	1746672	.	-	0	ID=cds1551;Parent=gene1597;Dbxref=Genbank:YP_856135.1,GeneID:4486864;Name=YP_856135.1;Note=identified by similarity to SP:P12282%3B match to protein family HMM PF00899%3B match to protein family HMM PF05237%3B match to protein family HMM TIGR02355;gbkey=CDS;gene=moeB;product=molybdopterin synthase sulfurylase MoeB;protein_id=YP_856135.1;transl_table=11
NC_008570.1	RefSeq	gene	1746669	1747895	.	-	.	ID=gene1598;Dbxref=GeneID:4488352;Name=AHA_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1600
NC_008570.1	RefSeq	CDS	1746669	1747895	.	-	0	ID=cds1552;Parent=gene1598;Dbxref=Genbank:YP_856136.1,GeneID:4488352;Name=YP_856136.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=YP_856136.1;transl_table=11
NC_008570.1	RefSeq	gene	1748201	1748857	.	+	.	ID=gene1599;Dbxref=GeneID:4488353;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AHA_1601
NC_008570.1	RefSeq	CDS	1748201	1748857	.	+	0	ID=cds1553;Parent=gene1599;Dbxref=Genbank:YP_856137.1,GeneID:4488353;Name=YP_856137.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=YP_856137.1;transl_table=11
NC_008570.1	RefSeq	gene	1749269	1750924	.	+	.	ID=gene1600;Dbxref=GeneID:4488354;Name=AHA_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1602
NC_008570.1	RefSeq	CDS	1749269	1750924	.	+	0	ID=cds1554;Parent=gene1600;Dbxref=Genbank:YP_856138.1,GeneID:4488354;Name=YP_856138.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856138.1;transl_table=11
NC_008570.1	RefSeq	gene	1751058	1751171	.	-	.	ID=gene1601;Dbxref=GeneID:4488355;Name=AHA_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1603
NC_008570.1	RefSeq	CDS	1751058	1751171	.	-	0	ID=cds1555;Parent=gene1601;Dbxref=Genbank:YP_856139.1,GeneID:4488355;Name=YP_856139.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856139.1;transl_table=11
NC_008570.1	RefSeq	gene	1751175	1752905	.	-	.	ID=gene1602;Dbxref=GeneID:4488356;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=AHA_1604
NC_008570.1	RefSeq	CDS	1751175	1752905	.	-	0	ID=cds1556;Parent=gene1602;Dbxref=Genbank:YP_856140.1,GeneID:4488356;Name=YP_856140.1;Note=catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate;gbkey=CDS;gene=fhs;product=formate--tetrahydrofolate ligase;protein_id=YP_856140.1;transl_table=11
NC_008570.1	RefSeq	gene	1752972	1753388	.	+	.	ID=gene1603;Dbxref=GeneID:4488357;Name=AHA_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1605
NC_008570.1	RefSeq	CDS	1752972	1753388	.	+	0	ID=cds1557;Parent=gene1603;Dbxref=Genbank:YP_856141.1,GeneID:4488357;Name=YP_856141.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856141.1;transl_table=11
NC_008570.1	RefSeq	gene	1753420	1754322	.	-	.	ID=gene1604;Dbxref=GeneID:4488358;Name=AHA_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1606
NC_008570.1	RefSeq	CDS	1753420	1754322	.	-	0	ID=cds1558;Parent=gene1604;Dbxref=Genbank:YP_856142.1,GeneID:4488358;Name=YP_856142.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856142.1;transl_table=11
NC_008570.1	RefSeq	gene	1754433	1754993	.	+	.	ID=gene1605;Dbxref=GeneID:4488359;Name=AHA_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1607
NC_008570.1	RefSeq	CDS	1754433	1754993	.	+	0	ID=cds1559;Parent=gene1605;Dbxref=Genbank:YP_856143.1,GeneID:4488359;Name=YP_856143.1;Note=identified by match to protein family HMM PF04264;gbkey=CDS;product=small protease;protein_id=YP_856143.1;transl_table=11
NC_008570.1	RefSeq	gene	1754993	1755730	.	+	.	ID=gene1606;Dbxref=GeneID:4488360;Name=AHA_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1608
NC_008570.1	RefSeq	CDS	1754993	1755730	.	+	0	ID=cds1560;Parent=gene1606;Dbxref=Genbank:YP_856144.1,GeneID:4488360;Name=YP_856144.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856144.1;transl_table=11
NC_008570.1	RefSeq	gene	1755917	1757038	.	+	.	ID=gene1607;Dbxref=GeneID:4488361;Name=AHA_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1609
NC_008570.1	RefSeq	CDS	1755917	1757038	.	+	0	ID=cds1561;Parent=gene1607;Dbxref=Genbank:YP_856145.1,GeneID:4488361;Name=YP_856145.1;Note=identified by match to protein family HMM PF00670;gbkey=CDS;product=S-adenosyl-L-homocysteine hydrolase NAD binding domain-containing protein;protein_id=YP_856145.1;transl_table=11
NC_008570.1	RefSeq	gene	1757076	1757387	.	+	.	ID=gene1608;Dbxref=GeneID:4488362;Name=AHA_1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1610
NC_008570.1	RefSeq	CDS	1757076	1757387	.	+	0	ID=cds1562;Parent=gene1608;Dbxref=Genbank:YP_856146.1,GeneID:4488362;Name=YP_856146.1;Note=identified by match to protein family HMM PF05169%3B match to protein family HMM TIGR02174;gbkey=CDS;product=SelT/selW/selH domain-containing protein;protein_id=YP_856146.1;transl_table=11
NC_008570.1	RefSeq	gene	1757450	1759174	.	-	.	ID=gene1609;Dbxref=GeneID:4488363;Name=AHA_1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1611
NC_008570.1	RefSeq	CDS	1757450	1759174	.	-	0	ID=cds1563;Parent=gene1609;Dbxref=Genbank:YP_856147.1,GeneID:4488363;Name=YP_856147.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=phosphate acyltransferase family protein;protein_id=YP_856147.1;transl_table=11
NC_008570.1	RefSeq	gene	1759317	1760540	.	-	.	ID=gene1610;Dbxref=GeneID:4488364;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AHA_1612
NC_008570.1	RefSeq	CDS	1759317	1760540	.	-	0	ID=cds1564;Parent=gene1610;Dbxref=Genbank:YP_856148.1,GeneID:4488364;Name=YP_856148.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=YP_856148.1;transl_table=11
NC_008570.1	RefSeq	gene	1761608	1763509	.	+	.	ID=gene1611;Dbxref=GeneID:4489158;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AHA_1613
NC_008570.1	RefSeq	CDS	1761608	1763509	.	+	0	ID=cds1565;Parent=gene1611;Dbxref=Genbank:YP_856149.1,GeneID:4489158;Name=YP_856149.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;gene=speA;product=arginine decarboxylase;protein_id=YP_856149.1;transl_table=11
NC_008570.1	RefSeq	gene	1763792	1763980	.	+	.	ID=gene1612;Dbxref=GeneID:4489159;Name=AHA_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1614
NC_008570.1	RefSeq	CDS	1763792	1763980	.	+	0	ID=cds1566;Parent=gene1612;Dbxref=Genbank:YP_856150.1,GeneID:4489159;Name=YP_856150.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856150.1;transl_table=11
NC_008570.1	RefSeq	gene	1764129	1764446	.	-	.	ID=gene1613;Dbxref=GeneID:4489160;Name=AHA_1615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1615
NC_008570.1	RefSeq	CDS	1764129	1764446	.	-	0	ID=cds1567;Parent=gene1613;Dbxref=Genbank:YP_856151.1,GeneID:4489160;Name=YP_856151.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856151.1;transl_table=11
NC_008570.1	RefSeq	gene	1764617	1766773	.	-	.	ID=gene1614;Dbxref=GeneID:4489161;Name=AHA_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1616
NC_008570.1	RefSeq	CDS	1764617	1766773	.	-	0	ID=cds1568;Parent=gene1614;Dbxref=Genbank:YP_856152.1,GeneID:4489161;Name=YP_856152.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856152.1;transl_table=11
NC_008570.1	RefSeq	gene	1766813	1768171	.	-	.	ID=gene1615;Dbxref=GeneID:4489162;Name=AHA_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1617
NC_008570.1	RefSeq	CDS	1766813	1768171	.	-	0	ID=cds1569;Parent=gene1615;Dbxref=Genbank:YP_856153.1,GeneID:4489162;Name=YP_856153.1;gbkey=CDS;product=inner membrane transport protein YhaO;protein_id=YP_856153.1;transl_table=11
NC_008570.1	RefSeq	gene	1768357	1768740	.	+	.	ID=gene1616;Dbxref=GeneID:4489163;Name=AHA_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1618
NC_008570.1	RefSeq	CDS	1768357	1768740	.	+	0	ID=cds1570;Parent=gene1616;Dbxref=Genbank:YP_856154.1,GeneID:4489163;Name=YP_856154.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=YP_856154.1;transl_table=11
NC_008570.1	RefSeq	gene	1768763	1770052	.	+	.	ID=gene1617;Dbxref=GeneID:4489164;Name=AHA_1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1619
NC_008570.1	RefSeq	CDS	1768763	1770052	.	+	0	ID=cds1571;Parent=gene1617;Dbxref=Genbank:YP_856155.1,GeneID:4489164;Name=YP_856155.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;product=hypothetical protein;protein_id=YP_856155.1;transl_table=11
NC_008570.1	RefSeq	gene	1770111	1770764	.	+	.	ID=gene1618;Dbxref=GeneID:4489165;Name=AHA_1620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1620
NC_008570.1	RefSeq	CDS	1770111	1770764	.	+	0	ID=cds1572;Parent=gene1618;Dbxref=Genbank:YP_856156.1,GeneID:4489165;Name=YP_856156.1;gbkey=CDS;product=MukF protein;protein_id=YP_856156.1;transl_table=11
NC_008570.1	RefSeq	gene	1770909	1771496	.	+	.	ID=gene1619;Dbxref=GeneID:4489166;Name=AHA_1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1621
NC_008570.1	RefSeq	CDS	1770909	1771496	.	+	0	ID=cds1573;Parent=gene1619;Dbxref=Genbank:YP_856157.1,GeneID:4489166;Name=YP_856157.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;product=fructose-2%3B6-bisphosphatase;protein_id=YP_856157.1;transl_table=11
NC_008570.1	RefSeq	gene	1771555	1772295	.	-	.	ID=gene1620;Dbxref=GeneID:4489167;Name=AHA_1622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1622
NC_008570.1	RefSeq	CDS	1771555	1772295	.	-	0	ID=cds1574;Parent=gene1620;Dbxref=Genbank:YP_856158.1,GeneID:4489167;Name=YP_856158.1;Note=identified by match to protein family HMM PF01844;gbkey=CDS;product=5-methylcytosine-specific restriction protein A;protein_id=YP_856158.1;transl_table=11
NC_008570.1	RefSeq	gene	1772489	1772956	.	+	.	ID=gene1621;Dbxref=GeneID:4489168;Name=AHA_1623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1623
NC_008570.1	RefSeq	CDS	1772489	1772956	.	+	0	ID=cds1575;Parent=gene1621;Dbxref=Genbank:YP_856159.1,GeneID:4489168;Name=YP_856159.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856159.1;transl_table=11
NC_008570.1	RefSeq	gene	1773110	1773478	.	+	.	ID=gene1622;Dbxref=GeneID:4489169;Name=AHA_1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1624
NC_008570.1	RefSeq	CDS	1773110	1773478	.	+	0	ID=cds1576;Parent=gene1622;Dbxref=Genbank:YP_856160.1,GeneID:4489169;Name=YP_856160.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=lactoylglutathione lyase family protein;protein_id=YP_856160.1;transl_table=11
NC_008570.1	RefSeq	gene	1773602	1775185	.	-	.	ID=gene1623;Dbxref=GeneID:4489170;Name=AHA_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1625
NC_008570.1	RefSeq	CDS	1773602	1775185	.	-	0	ID=cds1577;Parent=gene1623;Dbxref=Genbank:YP_856161.1,GeneID:4489170;Name=YP_856161.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856161.1;transl_table=11
NC_008570.1	RefSeq	gene	1775383	1776729	.	-	.	ID=gene1624;Dbxref=GeneID:4489171;Name=AHA_1626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1626
NC_008570.1	RefSeq	CDS	1775383	1776729	.	-	0	ID=cds1578;Parent=gene1624;Dbxref=Genbank:YP_856162.1,GeneID:4489171;Name=YP_856162.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=YP_856162.1;transl_table=11
NC_008570.1	RefSeq	gene	1777267	1777359	.	+	.	ID=gene1625;Dbxref=GeneID:4489172;Name=AHA_1627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1627
NC_008570.1	RefSeq	CDS	1777267	1777359	.	+	0	ID=cds1579;Parent=gene1625;Dbxref=Genbank:YP_856163.1,GeneID:4489172;Name=YP_856163.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856163.1;transl_table=11
NC_008570.1	RefSeq	gene	1777349	1778383	.	+	.	ID=gene1626;Dbxref=GeneID:4489173;Name=AHA_1628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1628
NC_008570.1	RefSeq	CDS	1777349	1778383	.	+	0	ID=cds1580;Parent=gene1626;Dbxref=Genbank:YP_856164.1,GeneID:4489173;Name=YP_856164.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridine synthase F;protein_id=YP_856164.1;transl_table=11
NC_008570.1	RefSeq	gene	1778456	1779691	.	-	.	ID=gene1627;Dbxref=GeneID:4489174;Name=AHA_1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1629
NC_008570.1	RefSeq	CDS	1778456	1779691	.	-	0	ID=cds1581;Parent=gene1627;Dbxref=Genbank:YP_856165.1,GeneID:4489174;Name=YP_856165.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=cyanate transport protein CynX;protein_id=YP_856165.1;transl_table=11
NC_008570.1	RefSeq	gene	1779684	1780187	.	-	.	ID=gene1628;Dbxref=GeneID:4489175;Name=AHA_1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1630
NC_008570.1	RefSeq	CDS	1779684	1780187	.	-	0	ID=cds1582;Parent=gene1628;Dbxref=Genbank:YP_856166.1,GeneID:4489175;Name=YP_856166.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;product=cytidine/deoxycytidylate deaminase;protein_id=YP_856166.1;transl_table=11
NC_008570.1	RefSeq	gene	1780298	1781146	.	+	.	ID=gene1629;Dbxref=GeneID:4489176;Name=AHA_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1631
NC_008570.1	RefSeq	CDS	1780298	1781146	.	+	0	ID=cds1583;Parent=gene1629;Dbxref=Genbank:YP_856167.1,GeneID:4489176;Name=YP_856167.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856167.1;transl_table=11
NC_008570.1	RefSeq	gene	1781169	1782368	.	-	.	ID=gene1630;Dbxref=GeneID:4490993;Name=AHA_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1632
NC_008570.1	RefSeq	CDS	1781169	1782368	.	-	0	ID=cds1584;Parent=gene1630;Dbxref=Genbank:YP_856168.1,GeneID:4490993;Name=YP_856168.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=MFS family transporter;protein_id=YP_856168.1;transl_table=11
NC_008570.1	RefSeq	gene	1782480	1782947	.	-	.	ID=gene1631;Dbxref=GeneID:4490994;Name=AHA_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1633
NC_008570.1	RefSeq	CDS	1782480	1782947	.	-	0	ID=cds1585;Parent=gene1631;Dbxref=Genbank:YP_856169.1,GeneID:4490994;Name=YP_856169.1;Note=identified by match to protein family HMM PF06445;gbkey=CDS;product=transcriptional regulatory protein;protein_id=YP_856169.1;transl_table=11
NC_008570.1	RefSeq	gene	1782988	1783143	.	-	.	ID=gene1632;Dbxref=GeneID:4490995;Name=AHA_1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1634
NC_008570.1	RefSeq	CDS	1782988	1783143	.	-	0	ID=cds1586;Parent=gene1632;Dbxref=Genbank:YP_856170.1,GeneID:4490995;Name=YP_856170.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856170.1;transl_table=11
NC_008570.1	RefSeq	gene	1783225	1783695	.	-	.	ID=gene1633;Dbxref=GeneID:4490996;Name=AHA_1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1635
NC_008570.1	RefSeq	CDS	1783225	1783695	.	-	0	ID=cds1587;Parent=gene1633;Dbxref=Genbank:YP_856171.1,GeneID:4490996;Name=YP_856171.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;product=cytosolic long-chain acyl-CoA thioester hydrolase family protein;protein_id=YP_856171.1;transl_table=11
NC_008570.1	RefSeq	gene	1783716	1784027	.	-	.	ID=gene1634;Dbxref=GeneID:4490997;Name=AHA_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1636
NC_008570.1	RefSeq	CDS	1783716	1784027	.	-	0	ID=cds1588;Parent=gene1634;Dbxref=Genbank:YP_856172.1,GeneID:4490997;Name=YP_856172.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856172.1;transl_table=11
NC_008570.1	RefSeq	gene	1784170	1784829	.	+	.	ID=gene1635;Dbxref=GeneID:4490998;Name=AHA_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1637
NC_008570.1	RefSeq	CDS	1784170	1784829	.	+	0	ID=cds1589;Parent=gene1635;Dbxref=Genbank:YP_856173.1,GeneID:4490998;Name=YP_856173.1;Note=identified by match to protein family HMM PF04391;gbkey=CDS;product=inner membrane protein YebE;protein_id=YP_856173.1;transl_table=11
NC_008570.1	RefSeq	gene	1784965	1785483	.	+	.	ID=gene1636;Dbxref=GeneID:4490999;Name=AHA_1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1638
NC_008570.1	RefSeq	CDS	1784965	1785483	.	+	0	ID=cds1590;Parent=gene1636;Dbxref=Genbank:YP_856174.1,GeneID:4490999;Name=YP_856174.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856174.1;transl_table=11
NC_008570.1	RefSeq	gene	1785524	1786963	.	-	.	ID=gene1637;Dbxref=GeneID:4491000;Name=AHA_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1639
NC_008570.1	RefSeq	CDS	1785524	1786963	.	-	0	ID=cds1591;Parent=gene1637;Dbxref=Genbank:YP_856175.1,GeneID:4491000;Name=YP_856175.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_856175.1;transl_table=11
NC_008570.1	RefSeq	gene	1787084	1788655	.	+	.	ID=gene1638;Dbxref=GeneID:4491001;Name=AHA_1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1640
NC_008570.1	RefSeq	CDS	1787084	1788655	.	+	0	ID=cds1592;Parent=gene1638;Dbxref=Genbank:YP_856176.1,GeneID:4491001;Name=YP_856176.1;Note=identified by match to protein family HMM PF01654;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=YP_856176.1;transl_table=11
NC_008570.1	RefSeq	gene	1788655	1789782	.	+	.	ID=gene1639;Dbxref=GeneID:4491002;Name=cydB-1;gbkey=Gene;gene=cydB-1;gene_biotype=protein_coding;locus_tag=AHA_1641
NC_008570.1	RefSeq	CDS	1788655	1789782	.	+	0	ID=cds1593;Parent=gene1639;Dbxref=Genbank:YP_856177.1,GeneID:4491002;Name=YP_856177.1;Note=identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203;gbkey=CDS;gene=cydB-1;product=cytochrome D ubiquinol oxidase subunit II;protein_id=YP_856177.1;transl_table=11
NC_008570.1	RefSeq	gene	1789810	1789923	.	+	.	ID=gene1640;Dbxref=GeneID:4491003;Name=AHA_1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1642
NC_008570.1	RefSeq	CDS	1789810	1789923	.	+	0	ID=cds1594;Parent=gene1640;Dbxref=Genbank:YP_856178.1,GeneID:4491003;Name=YP_856178.1;Note=identified by match to protein family HMM TIGR02106;gbkey=CDS;product=cyd operon protein YbgT;protein_id=YP_856178.1;transl_table=11
NC_008570.1	RefSeq	gene	1789986	1791158	.	-	.	ID=gene1641;Dbxref=GeneID:4491004;Name=AHA_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1643
NC_008570.1	RefSeq	CDS	1789986	1791158	.	-	0	ID=cds1595;Parent=gene1641;Dbxref=Genbank:YP_856179.1,GeneID:4491004;Name=YP_856179.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_856179.1;transl_table=11
NC_008570.1	RefSeq	gene	1791533	1792336	.	-	.	ID=gene1642;Dbxref=GeneID:4491005;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AHA_1644
NC_008570.1	RefSeq	CDS	1791533	1792336	.	-	0	ID=cds1596;Parent=gene1642;Dbxref=Genbank:YP_856180.1,GeneID:4491005;Name=YP_856180.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconate reductase B;protein_id=YP_856180.1;transl_table=11
NC_008570.1	RefSeq	gene	1792384	1792680	.	-	.	ID=gene1643;Dbxref=GeneID:4491006;Name=AHA_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1645
NC_008570.1	RefSeq	CDS	1792384	1792680	.	-	0	ID=cds1597;Parent=gene1643;Dbxref=Genbank:YP_856181.1,GeneID:4491006;Name=YP_856181.1;Note=identified by match to protein family HMM PF03992;gbkey=CDS;product=antibiotic biosynthesis monooxygenase family protein;protein_id=YP_856181.1;transl_table=11
NC_008570.1	RefSeq	gene	1792858	1793220	.	-	.	ID=gene1644;Dbxref=GeneID:4491007;Name=AHA_1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1646
NC_008570.1	RefSeq	CDS	1792858	1793220	.	-	0	ID=cds1598;Parent=gene1644;Dbxref=Genbank:YP_856182.1,GeneID:4491007;Name=YP_856182.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase/dioxygenase superfamily protein;protein_id=YP_856182.1;transl_table=11
NC_008570.1	RefSeq	gene	1793800	1794702	.	+	.	ID=gene1645;Dbxref=GeneID:4491008;Name=AHA_1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1647
NC_008570.1	RefSeq	CDS	1793800	1794702	.	+	0	ID=cds1599;Parent=gene1645;Dbxref=Genbank:YP_856183.1,GeneID:4491008;Name=YP_856183.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YafC;protein_id=YP_856183.1;transl_table=11
NC_008570.1	RefSeq	gene	1794869	1796371	.	-	.	ID=gene1646;Dbxref=GeneID:4491009;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AHA_1648
NC_008570.1	RefSeq	CDS	1794869	1796371	.	-	0	ID=cds1600;Parent=gene1646;Dbxref=Genbank:YP_856184.1,GeneID:4491009;Name=YP_856184.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=YP_856184.1;transl_table=11
NC_008570.1	RefSeq	gene	1796426	1797274	.	-	.	ID=gene1647;Dbxref=GeneID:4491010;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AHA_1649
NC_008570.1	RefSeq	CDS	1796426	1797274	.	-	0	ID=cds1601;Parent=gene1647;Dbxref=Genbank:YP_856185.1,GeneID:4491010;Name=YP_856185.1;Note=identified by similarity to SP:P11244%3B match to protein family HMM PF00230%3B match to protein family HMM TIGR00861;gbkey=CDS;gene=glpF;product=glycerol uptake facilitator protein;protein_id=YP_856185.1;transl_table=11
NC_008570.1	RefSeq	gene	1797762	1799117	.	+	.	ID=gene1648;Dbxref=GeneID:4491011;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AHA_1650
NC_008570.1	RefSeq	CDS	1797762	1799117	.	+	0	ID=cds1602;Parent=gene1648;Dbxref=Genbank:YP_856186.1,GeneID:4491011;Name=YP_856186.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;product=sn-glycerol-3-phosphate transporter;protein_id=YP_856186.1;transl_table=11
NC_008570.1	RefSeq	gene	1799219	1799977	.	+	.	ID=gene1649;Dbxref=GeneID:4491012;Name=glpR;gbkey=Gene;gene=glpR;gene_biotype=protein_coding;locus_tag=AHA_1651
NC_008570.1	RefSeq	CDS	1799219	1799977	.	+	0	ID=cds1603;Parent=gene1649;Dbxref=Genbank:YP_856187.1,GeneID:4491012;Name=YP_856187.1;Note=identified by similarity to SP:P09392%3B match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;gene=glpR;product=glycerol-3-phosphate regulon repressor;protein_id=YP_856187.1;transl_table=11
NC_008570.1	RefSeq	gene	1800299	1801786	.	+	.	ID=gene1650;Dbxref=GeneID:4490935;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AHA_1652
NC_008570.1	RefSeq	CDS	1800299	1801786	.	+	0	ID=cds1604;Parent=gene1650;Dbxref=Genbank:YP_856188.1,GeneID:4490935;Name=YP_856188.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=YP_856188.1;transl_table=11
NC_008570.1	RefSeq	gene	1801889	1802968	.	+	.	ID=gene1651;Dbxref=GeneID:4490936;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AHA_1653
NC_008570.1	RefSeq	CDS	1801889	1802968	.	+	0	ID=cds1605;Parent=gene1651;Dbxref=Genbank:YP_856189.1,GeneID:4490936;Name=YP_856189.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=YP_856189.1;transl_table=11
NC_008570.1	RefSeq	gene	1803287	1804360	.	+	.	ID=gene1652;Dbxref=GeneID:4490937;Name=AHA_1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1654
NC_008570.1	RefSeq	CDS	1803287	1804360	.	+	0	ID=cds1606;Parent=gene1652;Dbxref=Genbank:YP_856190.1,GeneID:4490937;Name=YP_856190.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_856190.1;transl_table=11
NC_008570.1	RefSeq	gene	1804479	1805618	.	+	.	ID=gene1653;Dbxref=GeneID:4490938;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AHA_1655
NC_008570.1	RefSeq	CDS	1804479	1805618	.	+	0	ID=cds1607;Parent=gene1653;Dbxref=Genbank:YP_856191.1,GeneID:4490938;Name=YP_856191.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=YP_856191.1;transl_table=11
NC_008570.1	RefSeq	gene	1805691	1806566	.	-	.	ID=gene1654;Dbxref=GeneID:4490939;Name=AHA_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1656
NC_008570.1	RefSeq	CDS	1805691	1806566	.	-	0	ID=cds1608;Parent=gene1654;Dbxref=Genbank:YP_856192.1,GeneID:4490939;Name=YP_856192.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856192.1;transl_table=11
NC_008570.1	RefSeq	gene	1806566	1807081	.	-	.	ID=gene1655;Dbxref=GeneID:4490940;Name=AHA_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1657
NC_008570.1	RefSeq	CDS	1806566	1807081	.	-	0	ID=cds1609;Parent=gene1655;Dbxref=Genbank:YP_856193.1,GeneID:4490940;Name=YP_856193.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856193.1;transl_table=11
NC_008570.1	RefSeq	gene	1807231	1807821	.	-	.	ID=gene1656;Dbxref=GeneID:4490941;Name=AHA_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1658
NC_008570.1	RefSeq	CDS	1807231	1807821	.	-	0	ID=cds1610;Parent=gene1656;Dbxref=Genbank:YP_856194.1,GeneID:4490941;Name=YP_856194.1;Note=identified by match to protein family HMM PF03974;gbkey=CDS;product=ecotin;protein_id=YP_856194.1;transl_table=11
NC_008570.1	RefSeq	gene	1807945	1808502	.	-	.	ID=gene1657;Dbxref=GeneID:4490942;Name=AHA_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1659
NC_008570.1	RefSeq	CDS	1807945	1808502	.	-	0	ID=cds1611;Parent=gene1657;Dbxref=Genbank:YP_856195.1,GeneID:4490942;Name=YP_856195.1;Note=identified by match to protein family HMM PF07603;gbkey=CDS;product=hypothetical protein;protein_id=YP_856195.1;transl_table=11
NC_008570.1	RefSeq	gene	1808499	1809872	.	-	.	ID=gene1658;Dbxref=GeneID:4490943;Name=AHA_1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1660
NC_008570.1	RefSeq	CDS	1808499	1809872	.	-	0	ID=cds1612;Parent=gene1658;Dbxref=Genbank:YP_856196.1,GeneID:4490943;Name=YP_856196.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856196.1;transl_table=11
NC_008570.1	RefSeq	gene	1809932	1812346	.	-	.	ID=gene1659;Dbxref=GeneID:4490944;Name=AHA_1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1661
NC_008570.1	RefSeq	CDS	1809932	1812346	.	-	0	ID=cds1613;Parent=gene1659;Dbxref=Genbank:YP_856197.1,GeneID:4490944;Name=YP_856197.1;Note=identified by match to protein family HMM PF01483;gbkey=CDS;product=proprotein convertase P-domain-containing protein;protein_id=YP_856197.1;transl_table=11
NC_008570.1	RefSeq	gene	1812379	1814457	.	-	.	ID=gene1660;Dbxref=GeneID:4490945;Name=AHA_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1662
NC_008570.1	RefSeq	CDS	1812379	1814457	.	-	0	ID=cds1614;Parent=gene1660;Dbxref=Genbank:YP_856198.1,GeneID:4490945;Name=YP_856198.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF02897;gbkey=CDS;product=protease II;protein_id=YP_856198.1;transl_table=11
NC_008570.1	RefSeq	gene	1814457	1816619	.	-	.	ID=gene1661;Dbxref=GeneID:4490946;Name=AHA_1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1663
NC_008570.1	RefSeq	CDS	1814457	1816619	.	-	0	ID=cds1615;Parent=gene1661;Dbxref=Genbank:YP_856199.1,GeneID:4490946;Name=YP_856199.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01785%3B match to protein family HMM TIGR01786;gbkey=CDS;product=hemin receptor;protein_id=YP_856199.1;transl_table=11
NC_008570.1	RefSeq	gene	1816926	1818776	.	-	.	ID=gene1662;Dbxref=GeneID:4490947;Name=AHA_1664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1664
NC_008570.1	RefSeq	CDS	1816926	1818776	.	-	0	ID=cds1616;Parent=gene1662;Dbxref=Genbank:YP_856200.1,GeneID:4490947;Name=YP_856200.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;product=sulfatase;protein_id=YP_856200.1;transl_table=11
NC_008570.1	RefSeq	gene	1818820	1819047	.	-	.	ID=gene1663;Dbxref=GeneID:4490948;Name=AHA_1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1665
NC_008570.1	RefSeq	CDS	1818820	1819047	.	-	0	ID=cds1617;Parent=gene1663;Dbxref=Genbank:YP_856201.1,GeneID:4490948;Name=YP_856201.1;Note=identified by match to protein family HMM PF07208;gbkey=CDS;product=hypothetical protein;protein_id=YP_856201.1;transl_table=11
NC_008570.1	RefSeq	gene	1819040	1820170	.	+	.	ID=gene1664;Dbxref=GeneID:4490949;Name=AHA_1666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1666
NC_008570.1	RefSeq	CDS	1819040	1820170	.	+	0	ID=cds1618;Parent=gene1664;Dbxref=Genbank:YP_856202.1,GeneID:4490949;Name=YP_856202.1;Note=identified by match to protein family HMM PF04245;gbkey=CDS;product=nucleoid-associated protein NdpA;protein_id=YP_856202.1;transl_table=11
NC_008570.1	RefSeq	gene	1820566	1821747	.	+	.	ID=gene1665;Dbxref=GeneID:4490950;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AHA_1667
NC_008570.1	RefSeq	CDS	1820566	1821747	.	+	0	ID=cds1619;Parent=gene1665;Dbxref=Genbank:YP_856203.1,GeneID:4490950;Name=YP_856203.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter periplasmic protein;protein_id=YP_856203.1;transl_table=11
NC_008570.1	RefSeq	gene	1821823	1823475	.	+	.	ID=gene1666;Dbxref=GeneID:4490951;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AHA_1668
NC_008570.1	RefSeq	CDS	1821823	1823475	.	+	0	ID=cds1620;Parent=gene1666;Dbxref=Genbank:YP_856204.1,GeneID:4490951;Name=YP_856204.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=YP_856204.1;transl_table=11
NC_008570.1	RefSeq	gene	1823488	1824378	.	+	.	ID=gene1667;Dbxref=GeneID:4490952;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AHA_1669
NC_008570.1	RefSeq	CDS	1823488	1824378	.	+	0	ID=cds1621;Parent=gene1667;Dbxref=Genbank:YP_856205.1,GeneID:4490952;Name=YP_856205.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose transporter permease;protein_id=YP_856205.1;transl_table=11
NC_008570.1	RefSeq	gene	1824448	1825584	.	+	.	ID=gene1668;Dbxref=GeneID:4490953;Name=AHA_1670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1670
NC_008570.1	RefSeq	CDS	1824448	1825584	.	+	0	ID=cds1622;Parent=gene1668;Dbxref=Genbank:YP_856206.1,GeneID:4490953;Name=YP_856206.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=YP_856206.1;transl_table=11
NC_008570.1	RefSeq	gene	1825700	1826515	.	-	.	ID=gene1669;Dbxref=GeneID:4489177;Name=AHA_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1671
NC_008570.1	RefSeq	CDS	1825700	1826515	.	-	0	ID=cds1623;Parent=gene1669;Dbxref=Genbank:YP_856207.1,GeneID:4489177;Name=YP_856207.1;Note=identified by match to protein family HMM PF03976;gbkey=CDS;product=polyphosphate kinase;protein_id=YP_856207.1;transl_table=11
NC_008570.1	RefSeq	gene	1826628	1827428	.	+	.	ID=gene1670;Dbxref=GeneID:4489178;Name=AHA_1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1672
NC_008570.1	RefSeq	CDS	1826628	1827428	.	+	0	ID=cds1624;Parent=gene1670;Dbxref=Genbank:YP_856208.1,GeneID:4489178;Name=YP_856208.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_856208.1;transl_table=11
NC_008570.1	RefSeq	gene	1827514	1828320	.	-	.	ID=gene1671;Dbxref=GeneID:4489179;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AHA_1673
NC_008570.1	RefSeq	CDS	1827514	1828320	.	-	0	ID=cds1625;Parent=gene1671;Dbxref=Genbank:YP_856209.1,GeneID:4489179;Name=YP_856209.1;Note=identified by similarity to SP:P0A908%3B match to protein family HMM PF06629;gbkey=CDS;gene=mipA;product=MltA-interacting protein MipA;protein_id=YP_856209.1;transl_table=11
NC_008570.1	RefSeq	gene	1828356	1829426	.	-	.	ID=gene1672;Dbxref=GeneID:4489180;Name=AHA_1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1674
NC_008570.1	RefSeq	CDS	1828356	1829426	.	-	0	ID=cds1626;Parent=gene1672;Dbxref=Genbank:YP_856210.1,GeneID:4489180;Name=YP_856210.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;product=PerM family permease;protein_id=YP_856210.1;transl_table=11
NC_008570.1	RefSeq	gene	1829442	1829684	.	-	.	ID=gene1673;Dbxref=GeneID:4489181;Name=AHA_1675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1675
NC_008570.1	RefSeq	CDS	1829442	1829684	.	-	0	ID=cds1627;Parent=gene1673;Dbxref=Genbank:YP_856211.1,GeneID:4489181;Name=YP_856211.1;Note=identified by match to protein family HMM PF01206;gbkey=CDS;product=hypothetical protein;protein_id=YP_856211.1;transl_table=11
NC_008570.1	RefSeq	gene	1829864	1831267	.	+	.	ID=gene1674;Dbxref=GeneID:4489182;Name=AHA_1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1676
NC_008570.1	RefSeq	CDS	1829864	1831267	.	+	0	ID=cds1628;Parent=gene1674;Dbxref=Genbank:YP_856212.1,GeneID:4489182;Name=YP_856212.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;product=zinc metalloprotease;protein_id=YP_856212.1;transl_table=11
NC_008570.1	RefSeq	gene	1831387	1831869	.	-	.	ID=gene1675;Dbxref=GeneID:4489183;Name=AHA_1677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1677
NC_008570.1	RefSeq	CDS	1831387	1831869	.	-	0	ID=cds1629;Parent=gene1675;Dbxref=Genbank:YP_856213.1,GeneID:4489183;Name=YP_856213.1;gbkey=CDS;product=thioredoxin;protein_id=YP_856213.1;transl_table=11
NC_008570.1	RefSeq	gene	1831930	1832280	.	+	.	ID=gene1676;Dbxref=GeneID:4489184;Name=arsC-1;gbkey=Gene;gene=arsC-1;gene_biotype=protein_coding;locus_tag=AHA_1678
NC_008570.1	RefSeq	CDS	1831930	1832280	.	+	0	ID=cds1630;Parent=gene1676;Dbxref=Genbank:YP_856214.1,GeneID:4489184;Name=YP_856214.1;Note=identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR00014;gbkey=CDS;gene=arsC-1;product=arsenate reductase;protein_id=YP_856214.1;transl_table=11
NC_008570.1	RefSeq	gene	1832277	1832672	.	+	.	ID=gene1677;Dbxref=GeneID:4489185;Name=AHA_1679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1679
NC_008570.1	RefSeq	CDS	1832277	1832672	.	+	0	ID=cds1631;Parent=gene1677;Dbxref=Genbank:YP_856215.1,GeneID:4489185;Name=YP_856215.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856215.1;transl_table=11
NC_008570.1	RefSeq	gene	1832963	1834033	.	+	.	ID=gene1678;Dbxref=GeneID:4489186;Name=AHA_1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1680
NC_008570.1	RefSeq	CDS	1832963	1834033	.	+	0	ID=cds1632;Parent=gene1678;Dbxref=Genbank:YP_856216.1,GeneID:4489186;Name=YP_856216.1;Note=identified by match to protein family HMM PF02275;gbkey=CDS;product=penicillin acylase;protein_id=YP_856216.1;transl_table=11
NC_008570.1	RefSeq	gene	1834070	1834690	.	-	.	ID=gene1679;Dbxref=GeneID:4489187;Name=AHA_1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1681
NC_008570.1	RefSeq	CDS	1834070	1834690	.	-	0	ID=cds1633;Parent=gene1679;Dbxref=Genbank:YP_856217.1,GeneID:4489187;Name=YP_856217.1;Note=identified by match to protein family HMM PF04336;gbkey=CDS;product=hypothetical protein;protein_id=YP_856217.1;transl_table=11
NC_008570.1	RefSeq	gene	1834867	1835997	.	+	.	ID=gene1680;Dbxref=GeneID:4489188;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AHA_1682
NC_008570.1	RefSeq	CDS	1834867	1835997	.	+	0	ID=cds1634;Parent=gene1680;Dbxref=Genbank:YP_856218.1,GeneID:4489188;Name=YP_856218.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01975;gbkey=CDS;gene=iadA;product=isoaspartyl dipeptidase;protein_id=YP_856218.1;transl_table=11
NC_008570.1	RefSeq	gene	1836108	1837010	.	-	.	ID=gene1681;Dbxref=GeneID:4489189;Name=AHA_1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1683
NC_008570.1	RefSeq	CDS	1836108	1837010	.	-	0	ID=cds1635;Parent=gene1681;Dbxref=Genbank:YP_856219.1,GeneID:4489189;Name=YP_856219.1;Note=identified by match to protein family HMM PF03956;gbkey=CDS;product=hypothetical protein;protein_id=YP_856219.1;transl_table=11
NC_008570.1	RefSeq	gene	1837544	1838314	.	+	.	ID=gene1682;Dbxref=GeneID:4489190;Name=AHA_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1684
NC_008570.1	RefSeq	CDS	1837544	1838314	.	+	0	ID=cds1636;Parent=gene1682;Dbxref=Genbank:YP_856220.1,GeneID:4489190;Name=YP_856220.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=YP_856220.1;transl_table=11
NC_008570.1	RefSeq	gene	1838380	1839153	.	+	.	ID=gene1683;Dbxref=GeneID:4489191;Name=AHA_1685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1685
NC_008570.1	RefSeq	CDS	1838380	1839153	.	+	0	ID=cds1637;Parent=gene1683;Dbxref=Genbank:YP_856221.1,GeneID:4489191;Name=YP_856221.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=arginine and ornithine binding protein;protein_id=YP_856221.1;transl_table=11
NC_008570.1	RefSeq	gene	1839358	1840098	.	+	.	ID=gene1684;Dbxref=GeneID:4489192;Name=AHA_1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1686
NC_008570.1	RefSeq	CDS	1839358	1840098	.	+	0	ID=cds1638;Parent=gene1684;Dbxref=Genbank:YP_856222.1,GeneID:4489192;Name=YP_856222.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=histidine ABC transporter permease HisQ;protein_id=YP_856222.1;transl_table=11
NC_008570.1	RefSeq	gene	1840102	1840794	.	+	.	ID=gene1685;Dbxref=GeneID:4489193;Name=AHA_1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1687
NC_008570.1	RefSeq	CDS	1840102	1840794	.	+	0	ID=cds1639;Parent=gene1685;Dbxref=Genbank:YP_856223.1,GeneID:4489193;Name=YP_856223.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=histidine ABC transporter permease HisM;protein_id=YP_856223.1;transl_table=11
NC_008570.1	RefSeq	gene	1840846	1841487	.	-	.	ID=gene1686;Dbxref=GeneID:4489194;Name=AHA_1688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1688
NC_008570.1	RefSeq	CDS	1840846	1841487	.	-	0	ID=cds1640;Parent=gene1686;Dbxref=Genbank:YP_856224.1,GeneID:4489194;Name=YP_856224.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856224.1;transl_table=11
NC_008570.1	RefSeq	gene	1841574	1842392	.	-	.	ID=gene1687;Dbxref=GeneID:4489195;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AHA_1689
NC_008570.1	RefSeq	CDS	1841574	1842392	.	-	0	ID=cds1641;Parent=gene1687;Dbxref=Genbank:YP_856225.1,GeneID:4489195;Name=YP_856225.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating enzyme 1;protein_id=YP_856225.1;transl_table=11
NC_008570.1	RefSeq	gene	1842458	1845436	.	-	.	ID=gene1688;Dbxref=GeneID:4489196;Name=AHA_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1690
NC_008570.1	RefSeq	CDS	1842458	1845436	.	-	0	ID=cds1642;Parent=gene1688;Dbxref=Genbank:YP_856226.1,GeneID:4489196;Name=YP_856226.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=PAS/GGDEF domain-containing protein;protein_id=YP_856226.1;transl_table=11
NC_008570.1	RefSeq	gene	1845532	1847220	.	+	.	ID=gene1689;Dbxref=GeneID:4490821;Name=AHA_1691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1691
NC_008570.1	RefSeq	CDS	1845532	1847220	.	+	0	ID=cds1643;Parent=gene1689;Dbxref=Genbank:YP_856227.1,GeneID:4490821;Name=YP_856227.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF00581%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;product=NADH dehydrogenase;protein_id=YP_856227.1;transl_table=11
NC_008570.1	RefSeq	gene	1847308	1852275	.	+	.	ID=gene1690;Dbxref=GeneID:4490822;Name=AHA_1692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1692
NC_008570.1	RefSeq	CDS	1847308	1852275	.	+	0	ID=cds1644;Parent=gene1690;Dbxref=Genbank:YP_856228.1,GeneID:4490822;Name=YP_856228.1;Note=identified by match to protein family HMM PF01835%3B match to protein family HMM PF07703;gbkey=CDS;product=alpha-2-macroglobulin;protein_id=YP_856228.1;transl_table=11
NC_008570.1	RefSeq	gene	1852286	1854685	.	+	.	ID=gene1691;Dbxref=GeneID:4490823;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AHA_1693
NC_008570.1	RefSeq	CDS	1852286	1854685	.	+	0	ID=cds1645;Parent=gene1691;Dbxref=Genbank:YP_856229.1,GeneID:4490823;Name=YP_856229.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02073;gbkey=CDS;gene=pbpC;product=penicillin-binding protein 1C;protein_id=YP_856229.1;transl_table=11
NC_008570.1	RefSeq	gene	1854787	1855590	.	-	.	ID=gene1692;Dbxref=GeneID:4490824;Name=AHA_1694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1694
NC_008570.1	RefSeq	CDS	1854787	1855590	.	-	0	ID=cds1646;Parent=gene1692;Dbxref=Genbank:YP_856230.1,GeneID:4490824;Name=YP_856230.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856230.1;transl_table=11
NC_008570.1	RefSeq	gene	1855925	1857373	.	+	.	ID=gene1693;Dbxref=GeneID:4490825;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AHA_1695
NC_008570.1	RefSeq	CDS	1855925	1857373	.	+	0	ID=cds1647;Parent=gene1693;Dbxref=Genbank:YP_856231.1,GeneID:4490825;Name=YP_856231.1;Note=Required for the synthesis of the thiazole moiety;gbkey=CDS;gene=thiI;product=thiamine biosynthesis protein ThiI;protein_id=YP_856231.1;transl_table=11
NC_008570.1	RefSeq	gene	1857452	1857988	.	-	.	ID=gene1694;Dbxref=GeneID:4490826;Name=AHA_1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1696
NC_008570.1	RefSeq	CDS	1857452	1857988	.	-	0	ID=cds1648;Parent=gene1694;Dbxref=Genbank:YP_856232.1,GeneID:4490826;Name=YP_856232.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856232.1;transl_table=11
NC_008570.1	RefSeq	gene	1857946	1858578	.	-	.	ID=gene1695;Dbxref=GeneID:4490827;Name=AHA_1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1697
NC_008570.1	RefSeq	CDS	1857946	1858578	.	-	0	ID=cds1649;Parent=gene1695;Dbxref=Genbank:YP_856233.1,GeneID:4490827;Name=YP_856233.1;Note=identified by match to protein family HMM PF03458;gbkey=CDS;product=hypothetical protein;protein_id=YP_856233.1;transl_table=11
NC_008570.1	RefSeq	gene	1858995	1859903	.	+	.	ID=gene1696;Dbxref=GeneID:4490828;Name=AHA_1698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1698
NC_008570.1	RefSeq	CDS	1858995	1859903	.	+	0	ID=cds1650;Parent=gene1696;Dbxref=Genbank:YP_856234.1,GeneID:4490828;Name=YP_856234.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellin;protein_id=YP_856234.1;transl_table=11
NC_008570.1	RefSeq	gene	1860482	1861387	.	+	.	ID=gene1697;Dbxref=GeneID:4490829;Name=AHA_1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1699
NC_008570.1	RefSeq	CDS	1860482	1861387	.	+	0	ID=cds1651;Parent=gene1697;Dbxref=Genbank:YP_856235.1,GeneID:4490829;Name=YP_856235.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellin;protein_id=YP_856235.1;transl_table=11
NC_008570.1	RefSeq	gene	1861426	1861866	.	+	.	ID=gene1698;Dbxref=GeneID:4490830;Name=AHA_1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1700
NC_008570.1	RefSeq	CDS	1861426	1861866	.	+	0	ID=cds1652;Parent=gene1698;Dbxref=Genbank:YP_856236.1,GeneID:4490830;Name=YP_856236.1;Note=identified by match to protein family HMM PF03646;gbkey=CDS;product=flagellin protein;protein_id=YP_856236.1;transl_table=11
NC_008570.1	RefSeq	gene	1861893	1863302	.	+	.	ID=gene1699;Dbxref=GeneID:4490831;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AHA_1701
NC_008570.1	RefSeq	CDS	1861893	1863302	.	+	0	ID=cds1653;Parent=gene1699;Dbxref=Genbank:YP_856237.1,GeneID:4490831;Name=YP_856237.1;Note=identified by match to protein family HMM PF02465%3B match to protein family HMM PF07195%3B match to protein family HMM PF07196;gbkey=CDS;gene=fliD;product=flagellar hook-associated protein 2;protein_id=YP_856237.1;transl_table=11
NC_008570.1	RefSeq	gene	1863328	1863750	.	+	.	ID=gene1700;Dbxref=GeneID:4490832;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AHA_1702
NC_008570.1	RefSeq	CDS	1863328	1863750	.	+	0	ID=cds1654;Parent=gene1700;Dbxref=Genbank:YP_856238.1,GeneID:4490832;Name=YP_856238.1;Note=identified by similarity to GB:AAT42123.1%3B match to protein family HMM PF02561%3B match to protein family HMM TIGR00208;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=YP_856238.1;transl_table=11
NC_008570.1	RefSeq	gene	1864132	1866141	.	+	.	ID=gene1701;Dbxref=GeneID:4490833;Name=AHA_1703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1703
NC_008570.1	RefSeq	CDS	1864132	1866141	.	+	0	ID=cds1655;Parent=gene1701;Dbxref=Genbank:YP_856239.1,GeneID:4490833;Name=YP_856239.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856239.1;transl_table=11
NC_008570.1	RefSeq	gene	1866230	1867051	.	-	.	ID=gene1702;Dbxref=GeneID:4490834;Name=AHA_1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1704
NC_008570.1	RefSeq	CDS	1866230	1867051	.	-	0	ID=cds1656;Parent=gene1702;Dbxref=Genbank:YP_856240.1,GeneID:4490834;Name=YP_856240.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_856240.1;transl_table=11
NC_008570.1	RefSeq	gene	1867044	1867913	.	-	.	ID=gene1703;Dbxref=GeneID:4490835;Name=AHA_1705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1705
NC_008570.1	RefSeq	CDS	1867044	1867913	.	-	0	ID=cds1657;Parent=gene1703;Dbxref=Genbank:YP_856241.1,GeneID:4490835;Name=YP_856241.1;gbkey=CDS;product=cobalamin biosynthesis protein CobD;protein_id=YP_856241.1;transl_table=11
NC_008570.1	RefSeq	gene	1867991	1868683	.	-	.	ID=gene1704;Dbxref=GeneID:4490836;Name=mtnN-2;gbkey=Gene;gene=mtnN-2;gene_biotype=protein_coding;locus_tag=AHA_1706
NC_008570.1	RefSeq	CDS	1867991	1868683	.	-	0	ID=cds1658;Parent=gene1704;Dbxref=Genbank:YP_856242.1,GeneID:4490836;Name=YP_856242.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704;gbkey=CDS;gene=mtnN-2;product=MTA/SAH nucleosidase;protein_id=YP_856242.1;transl_table=11
NC_008570.1	RefSeq	gene	1868791	1869549	.	-	.	ID=gene1705;Dbxref=GeneID:4490837;Name=AHA_1707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1707
NC_008570.1	RefSeq	CDS	1868791	1869549	.	-	0	ID=cds1659;Parent=gene1705;Dbxref=Genbank:YP_856243.1,GeneID:4490837;Name=YP_856243.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856243.1;transl_table=11
NC_008570.1	RefSeq	gene	1869639	1870571	.	-	.	ID=gene1706;Dbxref=GeneID:4490838;Name=AHA_1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1708
NC_008570.1	RefSeq	CDS	1869639	1870571	.	-	0	ID=cds1660;Parent=gene1706;Dbxref=Genbank:YP_856244.1,GeneID:4490838;Name=YP_856244.1;Note=identified by match to protein family HMM PF02535;gbkey=CDS;product=GufA protein;protein_id=YP_856244.1;transl_table=11
NC_008570.1	RefSeq	gene	1870808	1872580	.	+	.	ID=gene1707;Dbxref=GeneID:4490839;Name=AHA_1709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1709
NC_008570.1	RefSeq	CDS	1870808	1872580	.	+	0	ID=cds1661;Parent=gene1707;Dbxref=Genbank:YP_856245.1,GeneID:4490839;Name=YP_856245.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856245.1;transl_table=11
NC_008570.1	RefSeq	gene	1873040	1873894	.	-	.	ID=gene1708;Dbxref=GeneID:4488162;Name=AHA_1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1710
NC_008570.1	RefSeq	CDS	1873040	1873894	.	-	0	ID=cds1662;Parent=gene1708;Dbxref=Genbank:YP_856246.1,GeneID:4488162;Name=YP_856246.1;Note=identified by match to protein family HMM PF00459;gbkey=CDS;product=inositol-1-monophosphatase;protein_id=YP_856246.1;transl_table=11
NC_008570.1	RefSeq	gene	1874045	1874500	.	+	.	ID=gene1709;Dbxref=GeneID:4488163;Name=AHA_1711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1711
NC_008570.1	RefSeq	CDS	1874045	1874500	.	+	0	ID=cds1663;Parent=gene1709;Dbxref=Genbank:YP_856247.1,GeneID:4488163;Name=YP_856247.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856247.1;transl_table=11
NC_008570.1	RefSeq	gene	1874693	1875355	.	+	.	ID=gene1710;Dbxref=GeneID:4488164;Name=AHA_1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1712
NC_008570.1	RefSeq	CDS	1874693	1875355	.	+	0	ID=cds1664;Parent=gene1710;Dbxref=Genbank:YP_856248.1,GeneID:4488164;Name=YP_856248.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_856248.1;transl_table=11
NC_008570.1	RefSeq	gene	1875606	1876805	.	+	.	ID=gene1711;Dbxref=GeneID:4488165;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AHA_1713
NC_008570.1	RefSeq	CDS	1875606	1876805	.	+	0	ID=cds1665;Parent=gene1711;Dbxref=Genbank:YP_856249.1,GeneID:4488165;Name=YP_856249.1;Note=multidrug efflux protein involved in adaptation to low energy shock;gbkey=CDS;gene=emrD;product=multidrug resistance protein D;protein_id=YP_856249.1;transl_table=11
NC_008570.1	RefSeq	gene	1877170	1877544	.	-	.	ID=gene1712;Dbxref=GeneID:4488166;Name=AHA_1714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1714
NC_008570.1	RefSeq	CDS	1877170	1877544	.	-	0	ID=cds1666;Parent=gene1712;Dbxref=Genbank:YP_856250.1,GeneID:4488166;Name=YP_856250.1;Note=identified by match to protein family HMM PF05164;gbkey=CDS;product=hypothetical protein;protein_id=YP_856250.1;transl_table=11
NC_008570.1	RefSeq	gene	1877676	1878245	.	+	.	ID=gene1713;Dbxref=GeneID:4488167;Name=AHA_1715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1715
NC_008570.1	RefSeq	CDS	1877676	1878245	.	+	0	ID=cds1667;Parent=gene1713;Dbxref=Genbank:YP_856251.1,GeneID:4488167;Name=YP_856251.1;Note=identified by match to protein family HMM PF03695%3B match to protein family HMM TIGR02292;gbkey=CDS;product=hypothetical protein;protein_id=YP_856251.1;transl_table=11
NC_008570.1	RefSeq	gene	1878429	1879646	.	+	.	ID=gene1714;Dbxref=GeneID:4488168;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;locus_tag=AHA_1716
NC_008570.1	RefSeq	CDS	1878429	1879646	.	+	0	ID=cds1668;Parent=gene1714;Dbxref=Genbank:YP_856252.1,GeneID:4488168;Name=YP_856252.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494%3B match to protein family HMM TIGR01984%3B match to protein family HMM TIGR01988;gbkey=CDS;gene=ubiH;product=2-polyprenyl-6-methoxyphenol 4-hydroxylase;protein_id=YP_856252.1;transl_table=11
NC_008570.1	RefSeq	gene	1879742	1880971	.	+	.	ID=gene1715;Dbxref=GeneID:4488169;Name=AHA_1717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1717
NC_008570.1	RefSeq	CDS	1879742	1880971	.	+	0	ID=cds1669;Parent=gene1715;Dbxref=Genbank:YP_856253.1,GeneID:4488169;Name=YP_856253.1;Note=catalyzes the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone from 2-octaprenyl-6-methoxyphenol;gbkey=CDS;product=2-octaprenyl-6-methoxyphenol hydroxylase;protein_id=YP_856253.1;transl_table=11
NC_008570.1	RefSeq	gene	1881450	1882547	.	+	.	ID=gene1716;Dbxref=GeneID:4488170;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AHA_1718
NC_008570.1	RefSeq	CDS	1881450	1882547	.	+	0	ID=cds1670;Parent=gene1716;Dbxref=Genbank:YP_856254.1,GeneID:4488170;Name=YP_856254.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=glycine cleavage system aminomethyltransferase T;protein_id=YP_856254.1;transl_table=11
NC_008570.1	RefSeq	gene	1882653	1883042	.	+	.	ID=gene1717;Dbxref=GeneID:4488171;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AHA_1719
NC_008570.1	RefSeq	CDS	1882653	1883042	.	+	0	ID=cds1671;Parent=gene1717;Dbxref=Genbank:YP_856255.1,GeneID:4488171;Name=YP_856255.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;gene=gcvH;product=glycine cleavage system protein H;protein_id=YP_856255.1;transl_table=11
NC_008570.1	RefSeq	gene	1883295	1886171	.	+	.	ID=gene1718;Dbxref=GeneID:4488172;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AHA_1720
NC_008570.1	RefSeq	CDS	1883295	1886171	.	+	0	ID=cds1672;Parent=gene1718;Dbxref=Genbank:YP_856256.1,GeneID:4488172;Name=YP_856256.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;gene=gcvP;product=glycine dehydrogenase;protein_id=YP_856256.1;transl_table=11
NC_008570.1	RefSeq	gene	1886286	1887359	.	-	.	ID=gene1719;Dbxref=GeneID:4488173;Name=AHA_1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1721
NC_008570.1	RefSeq	CDS	1886286	1887359	.	-	0	ID=cds1673;Parent=gene1719;Dbxref=Genbank:YP_856257.1,GeneID:4488173;Name=YP_856257.1;Note=identified by match to protein family HMM PF03773;gbkey=CDS;product=hypothetical protein;protein_id=YP_856257.1;transl_table=11
NC_008570.1	RefSeq	gene	1887466	1887762	.	+	.	ID=gene1720;Dbxref=GeneID:4488174;Name=AHA_1722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1722
NC_008570.1	RefSeq	CDS	1887466	1887762	.	+	0	ID=cds1674;Parent=gene1720;Dbxref=Genbank:YP_856258.1,GeneID:4488174;Name=YP_856258.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=YP_856258.1;transl_table=11
NC_008570.1	RefSeq	gene	1887834	1888217	.	+	.	ID=gene1721;Dbxref=GeneID:4488175;Name=AHA_1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1723
NC_008570.1	RefSeq	CDS	1887834	1888217	.	+	0	ID=cds1675;Parent=gene1721;Dbxref=Genbank:YP_856259.1,GeneID:4488175;Name=YP_856259.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;product=arsenic operon regulator;protein_id=YP_856259.1;transl_table=11
NC_008570.1	RefSeq	gene	1888221	1888649	.	+	.	ID=gene1722;Dbxref=GeneID:4488176;Name=AHA_1724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1724
NC_008570.1	RefSeq	CDS	1888221	1888649	.	+	0	ID=cds1676;Parent=gene1722;Dbxref=Genbank:YP_856260.1,GeneID:4488176;Name=YP_856260.1;Note=identified by match to protein family HMM PF06953;gbkey=CDS;product=arsenical resistance operon trans-acting repressor ArsD;protein_id=YP_856260.1;transl_table=11
NC_008570.1	RefSeq	gene	1888718	1890517	.	+	.	ID=gene1723;Dbxref=GeneID:4488177;Name=AHA_1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1725
NC_008570.1	RefSeq	CDS	1888718	1890517	.	+	0	ID=cds1677;Parent=gene1723;Dbxref=Genbank:YP_856261.1,GeneID:4488177;Name=YP_856261.1;Note=identified by match to protein family HMM PF02374%3B match to protein family HMM TIGR00345;gbkey=CDS;product=arsenical pump-driving ATPase;protein_id=YP_856261.1;transl_table=11
NC_008570.1	RefSeq	gene	1890616	1891650	.	+	.	ID=gene1724;Dbxref=GeneID:4488178;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AHA_1726
NC_008570.1	RefSeq	CDS	1890616	1891650	.	+	0	ID=cds1678;Parent=gene1724;Dbxref=Genbank:YP_856262.1,GeneID:4488178;Name=YP_856262.1;Note=identified by match to protein family HMM PF01758%3B match to protein family HMM TIGR00832;gbkey=CDS;gene=arsB;product=arsenical-resistance protein;protein_id=YP_856262.1;transl_table=11
NC_008570.1	RefSeq	gene	1891647	1892078	.	+	.	ID=gene1725;Dbxref=GeneID:4488179;Name=arsC-2;gbkey=Gene;gene=arsC-2;gene_biotype=protein_coding;locus_tag=AHA_1727
NC_008570.1	RefSeq	CDS	1891647	1892078	.	+	0	ID=cds1679;Parent=gene1725;Dbxref=Genbank:YP_856263.1,GeneID:4488179;Name=YP_856263.1;Note=identified by similarity to SP:P37311%3B match to protein family HMM PF03960%3B match to protein family HMM TIGR00014;gbkey=CDS;gene=arsC-2;product=arsenate reductase;protein_id=YP_856263.1;transl_table=11
NC_008570.1	RefSeq	gene	1892219	1892968	.	+	.	ID=gene1726;Dbxref=GeneID:4488180;Name=AHA_1728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1728
NC_008570.1	RefSeq	CDS	1892219	1892968	.	+	0	ID=cds1680;Parent=gene1726;Dbxref=Genbank:YP_856264.1,GeneID:4488180;Name=YP_856264.1;gbkey=CDS;product=methyltransferase;protein_id=YP_856264.1;transl_table=11
NC_008570.1	RefSeq	gene	1893079	1893387	.	-	.	ID=gene1727;Dbxref=GeneID:4488181;Name=AHA_1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1729
NC_008570.1	RefSeq	CDS	1893079	1893387	.	-	0	ID=cds1681;Parent=gene1727;Dbxref=Genbank:YP_856265.1,GeneID:4488181;Name=YP_856265.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856265.1;transl_table=11
NC_008570.1	RefSeq	gene	1893491	1894783	.	+	.	ID=gene1728;Dbxref=GeneID:4490299;Name=AHA_1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1730
NC_008570.1	RefSeq	CDS	1893491	1894783	.	+	0	ID=cds1682;Parent=gene1728;Dbxref=Genbank:YP_856266.1,GeneID:4490299;Name=YP_856266.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator family transporter;protein_id=YP_856266.1;transl_table=11
NC_008570.1	RefSeq	gene	1894849	1896429	.	-	.	ID=gene1729;Dbxref=GeneID:4490300;Name=AHA_1731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1731
NC_008570.1	RefSeq	CDS	1894849	1896429	.	-	0	ID=cds1683;Parent=gene1729;Dbxref=Genbank:YP_856267.1,GeneID:4490300;Name=YP_856267.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992;gbkey=CDS;product=alkyl hydroperoxide reductase;protein_id=YP_856267.1;transl_table=11
NC_008570.1	RefSeq	gene	1896523	1897089	.	-	.	ID=gene1730;Dbxref=GeneID:4490301;Name=AHA_1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1732
NC_008570.1	RefSeq	CDS	1896523	1897089	.	-	0	ID=cds1684;Parent=gene1730;Dbxref=Genbank:YP_856268.1,GeneID:4490301;Name=YP_856268.1;Note=identified by match to protein family HMM PF00578;gbkey=CDS;product=alkyl hydroperoxide reductase;protein_id=YP_856268.1;transl_table=11
NC_008570.1	RefSeq	gene	1897750	1898196	.	-	.	ID=gene1731;Dbxref=GeneID:4490302;Name=AHA_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1733
NC_008570.1	RefSeq	CDS	1897750	1898196	.	-	0	ID=cds1685;Parent=gene1731;Dbxref=Genbank:YP_856269.1,GeneID:4490302;Name=YP_856269.1;Note=identified by similarity to SP:P39066%3B match to protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=YP_856269.1;transl_table=11
NC_008570.1	RefSeq	gene	1898409	1899476	.	+	.	ID=gene1732;Dbxref=GeneID:4490303;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AHA_1734
NC_008570.1	RefSeq	CDS	1898409	1899476	.	+	0	ID=cds1686;Parent=gene1732;Dbxref=Genbank:YP_856270.1,GeneID:4490303;Name=YP_856270.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=YP_856270.1;transl_table=11
NC_008570.1	RefSeq	gene	1899547	1900683	.	+	.	ID=gene1733;Dbxref=GeneID:4490304;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AHA_1735
NC_008570.1	RefSeq	CDS	1899547	1900683	.	+	0	ID=cds1687;Parent=gene1733;Dbxref=Genbank:YP_856271.1,GeneID:4490304;Name=YP_856271.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=YP_856271.1;transl_table=11
NC_008570.1	RefSeq	gene	1900734	1901069	.	+	.	ID=gene1734;Dbxref=GeneID:4490305;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AHA_1736
NC_008570.1	RefSeq	CDS	1900734	1901069	.	+	0	ID=cds1688;Parent=gene1734;Dbxref=Genbank:YP_856272.1,GeneID:4490305;Name=YP_856272.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=YP_856272.1;transl_table=11
NC_008570.1	RefSeq	gene	1901088	1902941	.	+	.	ID=gene1735;Dbxref=GeneID:4490306;Name=secD-1;gbkey=Gene;gene=secD-1;gene_biotype=protein_coding;locus_tag=AHA_1737
NC_008570.1	RefSeq	CDS	1901088	1902941	.	+	0	ID=cds1689;Parent=gene1735;Dbxref=Genbank:YP_856273.1,GeneID:4490306;Name=YP_856273.1;Note=identified by similarity to SP:P19673%3B match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD-1;product=protein-export membrane protein SecD;protein_id=YP_856273.1;transl_table=11
NC_008570.1	RefSeq	gene	1902951	1903898	.	+	.	ID=gene1736;Dbxref=GeneID:4490307;Name=secF-1;gbkey=Gene;gene=secF-1;gene_biotype=protein_coding;locus_tag=AHA_1738
NC_008570.1	RefSeq	CDS	1902951	1903898	.	+	0	ID=cds1690;Parent=gene1736;Dbxref=Genbank:YP_856274.1,GeneID:4490307;Name=YP_856274.1;Note=identified by similarity to SP:P19674%3B match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF-1;product=protein-export membrane protein SecF;protein_id=YP_856274.1;transl_table=11
NC_008570.1	RefSeq	gene	1903998	1904366	.	+	.	ID=gene1737;Dbxref=GeneID:4490308;Name=AHA_1739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1739
NC_008570.1	RefSeq	CDS	1903998	1904366	.	+	0	ID=cds1691;Parent=gene1737;Dbxref=Genbank:YP_856275.1,GeneID:4490308;Name=YP_856275.1;Note=identified by match to protein family HMM PF00581;gbkey=CDS;product=rhodanese domain-containing protein;protein_id=YP_856275.1;transl_table=11
NC_008570.1	RefSeq	gene	1904511	1905404	.	+	.	ID=gene1738;Dbxref=GeneID:4490309;Name=AHA_1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1740
NC_008570.1	RefSeq	CDS	1904511	1905404	.	+	0	ID=cds1692;Parent=gene1738;Dbxref=Genbank:YP_856276.1,GeneID:4490309;Name=YP_856276.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=YP_856276.1;transl_table=11
NC_008570.1	RefSeq	gene	1905522	1906394	.	-	.	ID=gene1739;Dbxref=GeneID:4490310;Name=AHA_1741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1741
NC_008570.1	RefSeq	CDS	1905522	1906394	.	-	0	ID=cds1693;Parent=gene1739;Dbxref=Genbank:YP_856277.1,GeneID:4490310;Name=YP_856277.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;product=collagenase;protein_id=YP_856277.1;transl_table=11
NC_008570.1	RefSeq	gene	1906407	1907402	.	-	.	ID=gene1740;Dbxref=GeneID:4490311;Name=AHA_1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1742
NC_008570.1	RefSeq	CDS	1906407	1907402	.	-	0	ID=cds1694;Parent=gene1740;Dbxref=Genbank:YP_856278.1,GeneID:4490311;Name=YP_856278.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;product=STM-proteaseA;protein_id=YP_856278.1;transl_table=11
NC_008570.1	RefSeq	gene	1907593	1908132	.	+	.	ID=gene1741;Dbxref=GeneID:4490312;Name=AHA_1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1744
NC_008570.1	RefSeq	CDS	1907593	1908132	.	+	0	ID=cds1695;Parent=gene1741;Dbxref=Genbank:YP_856279.1,GeneID:4490312;Name=YP_856279.1;Note=identified by match to protein family HMM PF02036;gbkey=CDS;product=sterol binding protein;protein_id=YP_856279.1;transl_table=11
NC_008570.1	RefSeq	gene	1908079	1908495	.	-	.	ID=gene1742;Dbxref=GeneID:4490313;Name=AHA_1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1743
NC_008570.1	RefSeq	CDS	1908079	1908495	.	-	0	ID=cds1696;Parent=gene1742;Dbxref=Genbank:YP_856280.1,GeneID:4490313;Name=YP_856280.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856280.1;transl_table=11
NC_008570.1	RefSeq	gene	1908675	1909400	.	+	.	ID=gene1743;Dbxref=GeneID:4490314;Name=AHA_1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1745
NC_008570.1	RefSeq	CDS	1908675	1909400	.	+	0	ID=cds1697;Parent=gene1743;Dbxref=Genbank:YP_856281.1,GeneID:4490314;Name=YP_856281.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00050;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_856281.1;transl_table=11
NC_008570.1	RefSeq	gene	1909494	1909997	.	+	.	ID=gene1744;Dbxref=GeneID:4490315;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AHA_1746
NC_008570.1	RefSeq	CDS	1909494	1909997	.	+	0	ID=cds1698;Parent=gene1744;Dbxref=Genbank:YP_856282.1,GeneID:4490315;Name=YP_856282.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738%3B match to protein family HMM TIGR02010;gbkey=CDS;gene=iscR;product=iron-sulfur cluster assembly transcription factor IscR;protein_id=YP_856282.1;transl_table=11
NC_008570.1	RefSeq	gene	1910055	1911269	.	+	.	ID=gene1745;Dbxref=GeneID:4490316;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AHA_1747
NC_008570.1	RefSeq	CDS	1910055	1911269	.	+	0	ID=cds1699;Parent=gene1745;Dbxref=Genbank:YP_856283.1,GeneID:4490316;Name=YP_856283.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;gene=iscS;product=cysteine desulfurase;protein_id=YP_856283.1;transl_table=11
NC_008570.1	RefSeq	gene	1911311	1911694	.	+	.	ID=gene1746;Dbxref=GeneID:4490317;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AHA_1748
NC_008570.1	RefSeq	CDS	1911311	1911694	.	+	0	ID=cds1700;Parent=gene1746;Dbxref=Genbank:YP_856284.1,GeneID:4490317;Name=YP_856284.1;Note=identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01999;gbkey=CDS;gene=iscU;product=scaffold protein;protein_id=YP_856284.1;transl_table=11
NC_008570.1	RefSeq	gene	1911710	1912033	.	+	.	ID=gene1747;Dbxref=GeneID:4490279;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AHA_1749
NC_008570.1	RefSeq	CDS	1911710	1912033	.	+	0	ID=cds1701;Parent=gene1747;Dbxref=Genbank:YP_856285.1,GeneID:4490279;Name=YP_856285.1;Note=identified by match to protein family HMM PF01521%3B match to protein family HMM TIGR00049%3B match to protein family HMM TIGR02011;gbkey=CDS;gene=iscA;product=iron-sulfur cluster assembly protein IscA;protein_id=YP_856285.1;transl_table=11
NC_008570.1	RefSeq	gene	1912156	1912674	.	+	.	ID=gene1748;Dbxref=GeneID:4490280;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AHA_1750
NC_008570.1	RefSeq	CDS	1912156	1912674	.	+	0	ID=cds1702;Parent=gene1748;Dbxref=Genbank:YP_856286.1,GeneID:4490280;Name=YP_856286.1;Note=identified by similarity to SP:P0A6L9%3B match to protein family HMM PF00226%3B match to protein family HMM PF07743%3B match to protein family HMM TIGR00714;gbkey=CDS;gene=hscB;product=Fe-S protein assembly co-chaperone HscB;protein_id=YP_856286.1;transl_table=11
NC_008570.1	RefSeq	gene	1912703	1914550	.	+	.	ID=gene1749;Dbxref=GeneID:4490281;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AHA_1751
NC_008570.1	RefSeq	CDS	1912703	1914550	.	+	0	ID=cds1703;Parent=gene1749;Dbxref=Genbank:YP_856287.1,GeneID:4490281;Name=YP_856287.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=YP_856287.1;transl_table=11
NC_008570.1	RefSeq	gene	1914552	1914890	.	+	.	ID=gene1750;Dbxref=GeneID:4490282;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AHA_1752
NC_008570.1	RefSeq	CDS	1914552	1914890	.	+	0	ID=cds1704;Parent=gene1750;Dbxref=Genbank:YP_856288.1,GeneID:4490282;Name=YP_856288.1;Note=identified by match to protein family HMM PF00111%3B match to protein family HMM TIGR02007;gbkey=CDS;gene=fdx;product=ferredoxin%2C 2Fe-2S type%2C ISC system;protein_id=YP_856288.1;transl_table=11
NC_008570.1	RefSeq	gene	1915048	1916349	.	+	.	ID=gene1751;Dbxref=GeneID:4490283;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AHA_1753
NC_008570.1	RefSeq	CDS	1915048	1916349	.	+	0	ID=cds1705;Parent=gene1751;Dbxref=Genbank:YP_856289.1,GeneID:4490283;Name=YP_856289.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;gene=pepB;product=aminopeptidase;protein_id=YP_856289.1;transl_table=11
NC_008570.1	RefSeq	gene	1916453	1917736	.	+	.	ID=gene1752;Dbxref=GeneID:4490284;Name=AHA_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1754
NC_008570.1	RefSeq	CDS	1916453	1917736	.	+	0	ID=cds1706;Parent=gene1752;Dbxref=Genbank:YP_856290.1,GeneID:4490284;Name=YP_856290.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=aminopeptidase;protein_id=YP_856290.1;transl_table=11
NC_008570.1	RefSeq	gene	1918006	1918434	.	+	.	ID=gene1753;Dbxref=GeneID:4490285;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AHA_1755
NC_008570.1	RefSeq	CDS	1918006	1918434	.	+	0	ID=cds1707;Parent=gene1753;Dbxref=Genbank:YP_856291.1,GeneID:4490285;Name=YP_856291.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=YP_856291.1;transl_table=11
NC_008570.1	RefSeq	gene	1918603	1919706	.	+	.	ID=gene1754;Dbxref=GeneID:4490286;Name=AHA_1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1756
NC_008570.1	RefSeq	CDS	1918603	1919706	.	+	0	ID=cds1708;Parent=gene1754;Dbxref=Genbank:YP_856292.1,GeneID:4490286;Name=YP_856292.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase N;protein_id=YP_856292.1;transl_table=11
NC_008570.1	RefSeq	gene	1919719	1920510	.	+	.	ID=gene1755;Dbxref=GeneID:4490287;Name=pilF;gbkey=Gene;gene=pilF;gene_biotype=protein_coding;locus_tag=AHA_1757
NC_008570.1	RefSeq	CDS	1919719	1920510	.	+	0	ID=cds1709;Parent=gene1755;Dbxref=Genbank:YP_856293.1,GeneID:4490287;Name=YP_856293.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM TIGR02521;gbkey=CDS;gene=pilF;product=type IV pilus biogenesis/stability protein PilW;protein_id=YP_856293.1;transl_table=11
NC_008570.1	RefSeq	gene	1920500	1921438	.	+	.	ID=gene1756;Dbxref=GeneID:4490288;Name=AHA_1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1758
NC_008570.1	RefSeq	CDS	1920500	1921438	.	+	0	ID=cds1710;Parent=gene1756;Dbxref=Genbank:YP_856294.1,GeneID:4490288;Name=YP_856294.1;Note=identified by similarity to GB:AAZ26824.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856294.1;transl_table=11
NC_008570.1	RefSeq	gene	1921449	1922564	.	+	.	ID=gene1757;Dbxref=GeneID:4490289;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=AHA_1759
NC_008570.1	RefSeq	CDS	1921449	1922564	.	+	0	ID=cds1711;Parent=gene1757;Dbxref=Genbank:YP_856295.1,GeneID:4490289;Name=YP_856295.1;Note=identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612;gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=YP_856295.1;transl_table=11
NC_008570.1	RefSeq	gene	1922703	1923980	.	+	.	ID=gene1758;Dbxref=GeneID:4490290;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AHA_1760
NC_008570.1	RefSeq	CDS	1922703	1923980	.	+	0	ID=cds1712;Parent=gene1758;Dbxref=Genbank:YP_856296.1,GeneID:4490290;Name=YP_856296.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=YP_856296.1;transl_table=11
NC_008570.1	RefSeq	gene	1923984	1924634	.	+	.	ID=gene1759;Dbxref=GeneID:4490291;Name=AHA_1761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1761
NC_008570.1	RefSeq	CDS	1923984	1924634	.	+	0	ID=cds1713;Parent=gene1759;Dbxref=Genbank:YP_856297.1,GeneID:4490291;Name=YP_856297.1;Note=identified by match to protein family HMM PF07721;gbkey=CDS;product=hypothetical protein;protein_id=YP_856297.1;transl_table=11
NC_008570.1	RefSeq	gene	1924654	1925811	.	+	.	ID=gene1760;Dbxref=GeneID:4490292;Name=AHA_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1762
NC_008570.1	RefSeq	CDS	1924654	1925811	.	+	0	ID=cds1714;Parent=gene1760;Dbxref=Genbank:YP_856298.1,GeneID:4490292;Name=YP_856298.1;Note=identified by match to protein family HMM PF01011;gbkey=CDS;product=PQQ repeat-containing protein;protein_id=YP_856298.1;transl_table=11
NC_008570.1	RefSeq	gene	1925886	1927385	.	+	.	ID=gene1761;Dbxref=GeneID:4490293;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=yfgK,yphC;locus_tag=AHA_1763
NC_008570.1	RefSeq	CDS	1925886	1927385	.	+	0	ID=cds1715;Parent=gene1761;Dbxref=Genbank:YP_856299.1,GeneID:4490293;Name=YP_856299.1;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=YP_856299.1;transl_table=11
NC_008570.1	RefSeq	gene	1927490	1927723	.	+	.	ID=gene1762;Dbxref=GeneID:4490294;Name=AHA_1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1764
NC_008570.1	RefSeq	CDS	1927490	1927723	.	+	0	ID=cds1716;Parent=gene1762;Dbxref=Genbank:YP_856300.1,GeneID:4490294;Name=YP_856300.1;Note=identified by match to protein family HMM PF07191;gbkey=CDS;product=ubiquitin ligase sinat5;protein_id=YP_856300.1;transl_table=11
NC_008570.1	RefSeq	gene	1928082	1929572	.	-	.	ID=gene1763;Dbxref=GeneID:4490295;Name=AHA_1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1765
NC_008570.1	RefSeq	CDS	1928082	1929572	.	-	0	ID=cds1717;Parent=gene1763;Dbxref=Genbank:YP_856301.1,GeneID:4490295;Name=YP_856301.1;Note=YfhD%3B uncharacterized member of the transglycosylase slt family%3B part of the rob operon%2C which plays a role in cellular resistance to antibiotics%2C bactericidal agents%2C and organic solvents%3B unknown function;gbkey=CDS;product=transglycosylase;protein_id=YP_856301.1;transl_table=11
NC_008570.1	RefSeq	gene	1929554	1933627	.	+	.	ID=gene1764;Dbxref=GeneID:4490296;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=AHA_1766
NC_008570.1	RefSeq	CDS	1929554	1933627	.	+	0	ID=cds1718;Parent=gene1764;Dbxref=Genbank:YP_856302.1,GeneID:4490296;Name=YP_856302.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_856302.1;transl_table=11
NC_008570.1	RefSeq	gene	1933689	1935215	.	-	.	ID=gene1765;Dbxref=GeneID:4490297;Name=AHA_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1767
NC_008570.1	RefSeq	CDS	1933689	1935215	.	-	0	ID=cds1719;Parent=gene1765;Dbxref=Genbank:YP_856303.1,GeneID:4490297;Name=YP_856303.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00229;gbkey=CDS;product=sensory box protein;protein_id=YP_856303.1;transl_table=11
NC_008570.1	RefSeq	gene	1935231	1936664	.	-	.	ID=gene1766;Dbxref=GeneID:4490298;Name=AHA_1768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1768
NC_008570.1	RefSeq	CDS	1935231	1936664	.	-	0	ID=cds1720;Parent=gene1766;Dbxref=Genbank:YP_856304.1,GeneID:4490298;Name=YP_856304.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00229;gbkey=CDS;product=response regulator/sensory box/hdig domain-containing protein;protein_id=YP_856304.1;transl_table=11
NC_008570.1	RefSeq	gene	1936661	1937791	.	-	.	ID=gene1767;Dbxref=GeneID:4486787;Name=AHA_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1769
NC_008570.1	RefSeq	CDS	1936661	1937791	.	-	0	ID=cds1721;Parent=gene1767;Dbxref=Genbank:YP_856305.1,GeneID:4486787;Name=YP_856305.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856305.1;transl_table=11
NC_008570.1	RefSeq	gene	1937981	1939444	.	-	.	ID=gene1768;Dbxref=GeneID:4486788;Name=AHA_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1770
NC_008570.1	RefSeq	CDS	1937981	1939444	.	-	0	ID=cds1722;Parent=gene1768;Dbxref=Genbank:YP_856306.1,GeneID:4486788;Name=YP_856306.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit N;protein_id=YP_856306.1;transl_table=11
NC_008570.1	RefSeq	gene	1939506	1941026	.	-	.	ID=gene1769;Dbxref=GeneID:4486789;Name=AHA_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1771
NC_008570.1	RefSeq	CDS	1939506	1941026	.	-	0	ID=cds1723;Parent=gene1769;Dbxref=Genbank:YP_856307.1,GeneID:4486789;Name=YP_856307.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit M;protein_id=YP_856307.1;transl_table=11
NC_008570.1	RefSeq	gene	1941105	1942952	.	-	.	ID=gene1770;Dbxref=GeneID:4486790;Name=AHA_1772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1772
NC_008570.1	RefSeq	CDS	1941105	1942952	.	-	0	ID=cds1724;Parent=gene1770;Dbxref=Genbank:YP_856308.1,GeneID:4486790;Name=YP_856308.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH dehydrogenase subunit L;protein_id=YP_856308.1;transl_table=11
NC_008570.1	RefSeq	gene	1942949	1943257	.	-	.	ID=gene1771;Dbxref=GeneID:4486791;Name=AHA_1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1773
NC_008570.1	RefSeq	CDS	1942949	1943257	.	-	0	ID=cds1725;Parent=gene1771;Dbxref=Genbank:YP_856309.1,GeneID:4486791;Name=YP_856309.1;Note=identified by match to protein family HMM PF00420;gbkey=CDS;product=NADH-quinone oxidoreductase chain k;protein_id=YP_856309.1;transl_table=11
NC_008570.1	RefSeq	gene	1943257	1943805	.	-	.	ID=gene1772;Dbxref=GeneID:4486792;Name=AHA_1774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1774
NC_008570.1	RefSeq	CDS	1943257	1943805	.	-	0	ID=cds1726;Parent=gene1772;Dbxref=Genbank:YP_856310.1,GeneID:4486792;Name=YP_856310.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit J;protein_id=YP_856310.1;transl_table=11
NC_008570.1	RefSeq	gene	1943816	1944358	.	-	.	ID=gene1773;Dbxref=GeneID:4486793;Name=AHA_1775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1775
NC_008570.1	RefSeq	CDS	1943816	1944358	.	-	0	ID=cds1727;Parent=gene1773;Dbxref=Genbank:YP_856311.1,GeneID:4486793;Name=YP_856311.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit I;protein_id=YP_856311.1;transl_table=11
NC_008570.1	RefSeq	gene	1944487	1945455	.	-	.	ID=gene1774;Dbxref=GeneID:4486794;Name=AHA_1776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1776
NC_008570.1	RefSeq	CDS	1944487	1945455	.	-	0	ID=cds1728;Parent=gene1774;Dbxref=Genbank:YP_856312.1,GeneID:4486794;Name=YP_856312.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit H;protein_id=YP_856312.1;transl_table=11
NC_008570.1	RefSeq	gene	1945452	1948181	.	-	.	ID=gene1775;Dbxref=GeneID:4486795;Name=AHA_1777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1777
NC_008570.1	RefSeq	CDS	1945452	1948181	.	-	0	ID=cds1729;Parent=gene1775;Dbxref=Genbank:YP_856313.1,GeneID:4486795;Name=YP_856313.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=YP_856313.1;transl_table=11
NC_008570.1	RefSeq	gene	1948261	1949628	.	-	.	ID=gene1776;Dbxref=GeneID:4486796;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AHA_1778
NC_008570.1	RefSeq	CDS	1948261	1949628	.	-	0	ID=cds1730;Parent=gene1776;Dbxref=Genbank:YP_856314.1,GeneID:4486796;Name=YP_856314.1;Note=shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;gene=nuoF;product=NADH dehydrogenase I subunit F;protein_id=YP_856314.1;transl_table=11
NC_008570.1	RefSeq	gene	1949625	1950167	.	-	.	ID=gene1777;Dbxref=GeneID:4486797;Name=AHA_1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1779
NC_008570.1	RefSeq	CDS	1949625	1950167	.	-	0	ID=cds1731;Parent=gene1777;Dbxref=Genbank:YP_856315.1,GeneID:4486797;Name=YP_856315.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=YP_856315.1;transl_table=11
NC_008570.1	RefSeq	gene	1950229	1952034	.	-	.	ID=gene1778;Dbxref=GeneID:4486798;Name=AHA_1780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1780
NC_008570.1	RefSeq	CDS	1950229	1952034	.	-	0	ID=cds1732;Parent=gene1778;Dbxref=Genbank:YP_856316.1,GeneID:4486798;Name=YP_856316.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=bifunctional NADH:ubiquinone oxidoreductase subunit C/D;protein_id=YP_856316.1;transl_table=11
NC_008570.1	RefSeq	gene	1952037	1952711	.	-	.	ID=gene1779;Dbxref=GeneID:4486799;Name=AHA_1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1781
NC_008570.1	RefSeq	CDS	1952037	1952711	.	-	0	ID=cds1733;Parent=gene1779;Dbxref=Genbank:YP_856317.1,GeneID:4486799;Name=YP_856317.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;product=NADH dehydrogenase subunit B;protein_id=YP_856317.1;transl_table=11
NC_008570.1	RefSeq	gene	1952741	1953145	.	-	.	ID=gene1780;Dbxref=GeneID:4486800;Name=AHA_1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1782
NC_008570.1	RefSeq	CDS	1952741	1953145	.	-	0	ID=cds1734;Parent=gene1780;Dbxref=Genbank:YP_856318.1,GeneID:4486800;Name=YP_856318.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit A;protein_id=YP_856318.1;transl_table=11
NC_008570.1	RefSeq	gene	1953404	1954279	.	-	.	ID=gene1781;Dbxref=GeneID:4486801;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AHA_1783
NC_008570.1	RefSeq	CDS	1953404	1954279	.	-	0	ID=cds1735;Parent=gene1781;Dbxref=Genbank:YP_856319.1,GeneID:4486801;Name=YP_856319.1;Note=with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B Vibrio parahaemolyticus protein is associated with the polar flagella;gbkey=CDS;gene=motB;product=flagellar motor protein MotB;protein_id=YP_856319.1;transl_table=11
NC_008570.1	RefSeq	gene	1954257	1955015	.	-	.	ID=gene1782;Dbxref=GeneID:4486802;Name=AHA_1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1784
NC_008570.1	RefSeq	CDS	1954257	1955015	.	-	0	ID=cds1736;Parent=gene1782;Dbxref=Genbank:YP_856320.1,GeneID:4486802;Name=YP_856320.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=chemotaxis protein MotA;protein_id=YP_856320.1;transl_table=11
NC_008570.1	RefSeq	gene	1955468	1955555	.	-	.	ID=gene1783;Dbxref=GeneID:4486803;Name=AHA_1785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1785
NC_008570.1	RefSeq	tRNA	1955468	1955555	.	-	.	ID=rna45;Parent=gene1783;Dbxref=GeneID:4486803;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	1955468	1955555	.	-	.	ID=id46;Parent=rna45;Dbxref=GeneID:4486803;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	1955701	1956318	.	-	.	ID=gene1784;Dbxref=GeneID:4486804;Name=AHA_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1786
NC_008570.1	RefSeq	CDS	1955701	1956318	.	-	0	ID=cds1737;Parent=gene1784;Dbxref=Genbank:YP_856321.1,GeneID:4486804;Name=YP_856321.1;Note=identified by match to protein family HMM PF04536;gbkey=CDS;product=hypothetical protein;protein_id=YP_856321.1;transl_table=11
NC_008570.1	RefSeq	gene	1956339	1957067	.	-	.	ID=gene1785;Dbxref=GeneID:4486805;Name=AHA_1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1787
NC_008570.1	RefSeq	CDS	1956339	1957067	.	-	0	ID=cds1738;Parent=gene1785;Dbxref=Genbank:YP_856322.1,GeneID:4486805;Name=YP_856322.1;Note=identified by match to protein family HMM PF04536;gbkey=CDS;product=hypothetical protein;protein_id=YP_856322.1;transl_table=11
NC_008570.1	RefSeq	gene	1957064	1957654	.	-	.	ID=gene1786;Dbxref=GeneID:4487821;Name=AHA_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1788
NC_008570.1	RefSeq	CDS	1957064	1957654	.	-	0	ID=cds1739;Parent=gene1786;Dbxref=Genbank:YP_856323.1,GeneID:4487821;Name=YP_856323.1;Note=identified by match to protein family HMM PF04011;gbkey=CDS;product=LemA protein;protein_id=YP_856323.1;transl_table=11
NC_008570.1	RefSeq	gene	1957712	1958494	.	-	.	ID=gene1787;Dbxref=GeneID:4487822;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AHA_1789
NC_008570.1	RefSeq	CDS	1957712	1958494	.	-	0	ID=cds1740;Parent=gene1787;Dbxref=Genbank:YP_856324.1,GeneID:4487822;Name=YP_856324.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=YP_856324.1;transl_table=11
NC_008570.1	RefSeq	gene	1958652	1959194	.	+	.	ID=gene1788;Dbxref=GeneID:4487823;Name=AHA_1790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1790
NC_008570.1	RefSeq	CDS	1958652	1959194	.	+	0	ID=cds1741;Parent=gene1788;Dbxref=Genbank:YP_856325.1,GeneID:4487823;Name=YP_856325.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856325.1;transl_table=11
NC_008570.1	RefSeq	gene	1959405	1959692	.	+	.	ID=gene1789;Dbxref=GeneID:4487824;Name=AHA_1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1791
NC_008570.1	RefSeq	CDS	1959405	1959692	.	+	0	ID=cds1742;Parent=gene1789;Dbxref=Genbank:YP_856326.1,GeneID:4487824;Name=YP_856326.1;Note=identified by match to protein family HMM PF00076;gbkey=CDS;product=RNA-binding protein;protein_id=YP_856326.1;transl_table=11
NC_008570.1	RefSeq	gene	1959764	1960663	.	-	.	ID=gene1790;Dbxref=GeneID:4487825;Name=AHA_1792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1792
NC_008570.1	RefSeq	CDS	1959764	1960663	.	-	0	ID=cds1743;Parent=gene1790;Dbxref=Genbank:YP_856327.1,GeneID:4487825;Name=YP_856327.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=YP_856327.1;transl_table=11
NC_008570.1	RefSeq	gene	1960779	1961186	.	+	.	ID=gene1791;Dbxref=GeneID:4487826;Name=AHA_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1793
NC_008570.1	RefSeq	CDS	1960779	1961186	.	+	0	ID=cds1744;Parent=gene1791;Dbxref=Genbank:YP_856328.1,GeneID:4487826;Name=YP_856328.1;Note=identified by match to protein family HMM PF07022;gbkey=CDS;product=bacteriophage CI repressor protein;protein_id=YP_856328.1;transl_table=11
NC_008570.1	RefSeq	gene	1961268	1961969	.	+	.	ID=gene1792;Dbxref=GeneID:4487827;Name=AHA_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1794
NC_008570.1	RefSeq	CDS	1961268	1961969	.	+	0	ID=cds1745;Parent=gene1792;Dbxref=Genbank:YP_856329.1,GeneID:4487827;Name=YP_856329.1;gbkey=CDS;product=protein CsgA;protein_id=YP_856329.1;transl_table=11
NC_008570.1	RefSeq	gene	1962060	1963079	.	+	.	ID=gene1793;Dbxref=GeneID:4487828;Name=AHA_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1795
NC_008570.1	RefSeq	CDS	1962060	1963079	.	+	0	ID=cds1746;Parent=gene1793;Dbxref=Genbank:YP_856330.1,GeneID:4487828;Name=YP_856330.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;product=L-allo-threonine aldolase;protein_id=YP_856330.1;transl_table=11
NC_008570.1	RefSeq	gene	1963140	1963577	.	-	.	ID=gene1794;Dbxref=GeneID:4487829;Name=AHA_1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1796
NC_008570.1	RefSeq	CDS	1963140	1963577	.	-	0	ID=cds1747;Parent=gene1794;Dbxref=Genbank:YP_856331.1,GeneID:4487829;Name=YP_856331.1;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_856331.1;transl_table=11
NC_008570.1	RefSeq	gene	1963580	1964614	.	-	.	ID=gene1795;Dbxref=GeneID:4487830;Name=AHA_1797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1797
NC_008570.1	RefSeq	CDS	1963580	1964614	.	-	0	ID=cds1748;Parent=gene1795;Dbxref=Genbank:YP_856332.1,GeneID:4487830;Name=YP_856332.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=YP_856332.1;transl_table=11
NC_008570.1	RefSeq	gene	1964669	1965607	.	-	.	ID=gene1796;Dbxref=GeneID:4487831;Name=AHA_1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1798
NC_008570.1	RefSeq	CDS	1964669	1965607	.	-	0	ID=cds1749;Parent=gene1796;Dbxref=Genbank:YP_856333.1,GeneID:4487831;Name=YP_856333.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856333.1;transl_table=11
NC_008570.1	RefSeq	gene	1965681	1966382	.	-	.	ID=gene1797;Dbxref=GeneID:4487832;Name=AHA_1799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1799
NC_008570.1	RefSeq	CDS	1965681	1966382	.	-	0	ID=cds1750;Parent=gene1797;Dbxref=Genbank:YP_856334.1,GeneID:4487832;Name=YP_856334.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856334.1;transl_table=11
NC_008570.1	RefSeq	gene	1966555	1968486	.	+	.	ID=gene1798;Dbxref=GeneID:4487833;Name=AHA_1800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1800
NC_008570.1	RefSeq	CDS	1966555	1968486	.	+	0	ID=cds1751;Parent=gene1798;Dbxref=Genbank:YP_856335.1,GeneID:4487833;Name=YP_856335.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=PAS/GGDEF domain-containing protein;protein_id=YP_856335.1;transl_table=11
NC_008570.1	RefSeq	gene	1968575	1969300	.	+	.	ID=gene1799;Dbxref=GeneID:4487834;Name=AHA_1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1801
NC_008570.1	RefSeq	CDS	1968575	1969300	.	+	0	ID=cds1752;Parent=gene1799;Dbxref=Genbank:YP_856336.1,GeneID:4487834;Name=YP_856336.1;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;gbkey=CDS;product=nitroreductase A;protein_id=YP_856336.1;transl_table=11
NC_008570.1	RefSeq	gene	1969489	1970253	.	+	.	ID=gene1800;Dbxref=GeneID:4487835;Name=AHA_1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1802
NC_008570.1	RefSeq	CDS	1969489	1970253	.	+	0	ID=cds1753;Parent=gene1800;Dbxref=Genbank:YP_856337.1,GeneID:4487835;Name=YP_856337.1;gbkey=CDS;product=DNA repair ATPase;protein_id=YP_856337.1;transl_table=11
NC_008570.1	RefSeq	gene	1970256	1970801	.	+	.	ID=gene1801;Dbxref=GeneID:4487836;Name=AHA_1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1803
NC_008570.1	RefSeq	CDS	1970256	1970801	.	+	0	ID=cds1754;Parent=gene1801;Dbxref=Genbank:YP_856338.1,GeneID:4487836;Name=YP_856338.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856338.1;transl_table=11
NC_008570.1	RefSeq	gene	1970848	1972056	.	-	.	ID=gene1802;Dbxref=GeneID:4487837;Name=AHA_1804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1804
NC_008570.1	RefSeq	CDS	1970848	1972056	.	-	0	ID=cds1755;Parent=gene1802;Dbxref=Genbank:YP_856339.1,GeneID:4487837;Name=YP_856339.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator family transporter;protein_id=YP_856339.1;transl_table=11
NC_008570.1	RefSeq	gene	1972150	1973025	.	+	.	ID=gene1803;Dbxref=GeneID:4487838;Name=AHA_1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1805
NC_008570.1	RefSeq	CDS	1972150	1973025	.	+	0	ID=cds1756;Parent=gene1803;Dbxref=Genbank:YP_856340.1,GeneID:4487838;Name=YP_856340.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator;protein_id=YP_856340.1;transl_table=11
NC_008570.1	RefSeq	gene	1973099	1974073	.	+	.	ID=gene1804;Dbxref=GeneID:4487839;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AHA_1806
NC_008570.1	RefSeq	CDS	1973099	1974073	.	+	0	ID=cds1757;Parent=gene1804;Dbxref=Genbank:YP_856341.1,GeneID:4487839;Name=YP_856341.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=transcriptional regulator CysB;protein_id=YP_856341.1;transl_table=11
NC_008570.1	RefSeq	gene	1974152	1974745	.	-	.	ID=gene1805;Dbxref=GeneID:4487840;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AHA_1807
NC_008570.1	RefSeq	CDS	1974152	1974745	.	-	0	ID=cds1758;Parent=gene1805;Dbxref=Genbank:YP_856342.1,GeneID:4487840;Name=YP_856342.1;Note=identified by similarity to SP:P0A7I7%3B match to protein family HMM PF00925%3B match to protein family HMM TIGR00505;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=YP_856342.1;transl_table=11
NC_008570.1	RefSeq	gene	1974995	1975687	.	+	.	ID=gene1806;Dbxref=GeneID:4490131;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AHA_1808
NC_008570.1	RefSeq	CDS	1974995	1975687	.	+	0	ID=cds1759;Parent=gene1806;Dbxref=Genbank:YP_856343.1,GeneID:4490131;Name=YP_856343.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=YP_856343.1;transl_table=11
NC_008570.1	RefSeq	gene	1975781	1977451	.	+	.	ID=gene1807;Dbxref=GeneID:4490132;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AHA_1809
NC_008570.1	RefSeq	CDS	1975781	1977451	.	+	0	ID=cds1760;Parent=gene1807;Dbxref=Genbank:YP_856344.1,GeneID:4490132;Name=YP_856344.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=YP_856344.1;transl_table=11
NC_008570.1	RefSeq	gene	1977547	1977831	.	+	.	ID=gene1808;Dbxref=GeneID:4490133;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AHA_1810
NC_008570.1	RefSeq	CDS	1977547	1977831	.	+	0	ID=cds1761;Parent=gene1808;Dbxref=Genbank:YP_856345.1,GeneID:4490133;Name=YP_856345.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=YP_856345.1;transl_table=11
NC_008570.1	RefSeq	gene	1977988	1978272	.	+	.	ID=gene1809;Dbxref=GeneID:4490134;Name=AHA_1811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1811
NC_008570.1	RefSeq	CDS	1977988	1978272	.	+	0	ID=cds1762;Parent=gene1809;Dbxref=Genbank:YP_856346.1,GeneID:4490134;Name=YP_856346.1;Note=identified by match to protein family HMM PF06305;gbkey=CDS;product=hypothetical protein;protein_id=YP_856346.1;transl_table=11
NC_008570.1	RefSeq	gene	1978282	1979448	.	+	.	ID=gene1810;Dbxref=GeneID:4490135;Name=AHA_1812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1812
NC_008570.1	RefSeq	CDS	1978282	1979448	.	+	0	ID=cds1763;Parent=gene1810;Dbxref=Genbank:YP_856347.1,GeneID:4490135;Name=YP_856347.1;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=YP_856347.1;transl_table=11
NC_008570.1	RefSeq	gene	1979550	1980251	.	+	.	ID=gene1811;Dbxref=GeneID:4490136;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AHA_1813
NC_008570.1	RefSeq	CDS	1979550	1980251	.	+	0	ID=cds1764;Parent=gene1811;Dbxref=Genbank:YP_856348.1,GeneID:4490136;Name=YP_856348.1;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=YP_856348.1;transl_table=11
NC_008570.1	RefSeq	gene	1980299	1980856	.	-	.	ID=gene1812;Dbxref=GeneID:4490137;Name=AHA_1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1814
NC_008570.1	RefSeq	CDS	1980299	1980856	.	-	0	ID=cds1765;Parent=gene1812;Dbxref=Genbank:YP_856349.1,GeneID:4490137;Name=YP_856349.1;gbkey=CDS;product=integral membrane protein;protein_id=YP_856349.1;transl_table=11
NC_008570.1	RefSeq	gene	1980807	1981493	.	+	.	ID=gene1813;Dbxref=GeneID:4490138;Name=AHA_1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1815
NC_008570.1	RefSeq	CDS	1980807	1981493	.	+	0	ID=cds1766;Parent=gene1813;Dbxref=Genbank:YP_856350.1,GeneID:4490138;Name=YP_856350.1;Note=identified by match to protein family HMM PF03942;gbkey=CDS;product=DTW domain-containing protein;protein_id=YP_856350.1;transl_table=11
NC_008570.1	RefSeq	gene	1981516	1982223	.	+	.	ID=gene1814;Dbxref=GeneID:4490139;Name=exsB;gbkey=Gene;gene=exsB;gene_biotype=protein_coding;locus_tag=AHA_1816
NC_008570.1	RefSeq	CDS	1981516	1982223	.	+	0	ID=cds1767;Parent=gene1814;Dbxref=Genbank:YP_856351.1,GeneID:4490139;Name=YP_856351.1;Note=identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364;gbkey=CDS;gene=exsB;product=exsB protein;protein_id=YP_856351.1;transl_table=11
NC_008570.1	RefSeq	gene	1982243	1982956	.	+	.	ID=gene1815;Dbxref=GeneID:4490140;Name=AHA_1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1817
NC_008570.1	RefSeq	CDS	1982243	1982956	.	+	0	ID=cds1768;Parent=gene1815;Dbxref=Genbank:YP_856352.1,GeneID:4490140;Name=YP_856352.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical activating enzyme;protein_id=YP_856352.1;transl_table=11
NC_008570.1	RefSeq	gene	1982958	1983188	.	+	.	ID=gene1816;Dbxref=GeneID:4490141;Name=AHA_1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1818
NC_008570.1	RefSeq	CDS	1982958	1983188	.	+	0	ID=cds1769;Parent=gene1816;Dbxref=Genbank:YP_856353.1,GeneID:4490141;Name=YP_856353.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856353.1;transl_table=11
NC_008570.1	RefSeq	gene	1983185	1983748	.	+	.	ID=gene1817;Dbxref=GeneID:4490142;Name=AHA_1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1819
NC_008570.1	RefSeq	CDS	1983185	1983748	.	+	0	ID=cds1770;Parent=gene1817;Dbxref=Genbank:YP_856354.1,GeneID:4490142;Name=YP_856354.1;Note=identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636;gbkey=CDS;product=ATP:cob(I)alamin adenosyltransferase;protein_id=YP_856354.1;transl_table=11
NC_008570.1	RefSeq	gene	1983815	1984219	.	-	.	ID=gene1818;Dbxref=GeneID:4490143;Name=AHA_1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1820
NC_008570.1	RefSeq	CDS	1983815	1984219	.	-	0	ID=cds1771;Parent=gene1818;Dbxref=Genbank:YP_856355.1,GeneID:4490143;Name=YP_856355.1;Note=identified by match to protein family HMM PF00816;gbkey=CDS;product=DNA-binding protein StpA;protein_id=YP_856355.1;transl_table=11
NC_008570.1	RefSeq	gene	1984799	1986379	.	+	.	ID=gene1819;Dbxref=GeneID:4490144;Name=AHA_1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1821
NC_008570.1	RefSeq	CDS	1984799	1986379	.	+	0	ID=cds1772;Parent=gene1819;Dbxref=Genbank:YP_856356.1,GeneID:4490144;Name=YP_856356.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;product=Na(+)/H(+) antiporter family protein;protein_id=YP_856356.1;transl_table=11
NC_008570.1	RefSeq	gene	1986466	1987047	.	+	.	ID=gene1820;Dbxref=GeneID:4490145;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AHA_1822
NC_008570.1	RefSeq	CDS	1986466	1987047	.	+	0	ID=cds1773;Parent=gene1820;Dbxref=Genbank:YP_856357.1,GeneID:4490145;Name=YP_856357.1;Note=identified by match to protein family HMM PF00265;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=YP_856357.1;transl_table=11
NC_008570.1	RefSeq	gene	1987116	1988453	.	-	.	ID=gene1821;Dbxref=GeneID:4490146;Name=AHA_1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1823
NC_008570.1	RefSeq	CDS	1987116	1988453	.	-	0	ID=cds1774;Parent=gene1821;Dbxref=Genbank:YP_856358.1,GeneID:4490146;Name=YP_856358.1;Note=identified by match to protein family HMM PF08014%3B match to protein family HMM TIGR02421;gbkey=CDS;product=hypothetical protein;protein_id=YP_856358.1;transl_table=11
NC_008570.1	RefSeq	gene	1988606	1989067	.	+	.	ID=gene1822;Dbxref=GeneID:4490147;Name=AHA_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1824
NC_008570.1	RefSeq	CDS	1988606	1989067	.	+	0	ID=cds1775;Parent=gene1822;Dbxref=Genbank:YP_856359.1,GeneID:4490147;Name=YP_856359.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856359.1;transl_table=11
NC_008570.1	RefSeq	gene	1989214	1989301	.	+	.	ID=gene1823;Dbxref=GeneID:4490148;Name=AHA_1825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1825
NC_008570.1	RefSeq	tRNA	1989214	1989301	.	+	.	ID=rna46;Parent=gene1823;Dbxref=GeneID:4490148;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	1989214	1989301	.	+	.	ID=id47;Parent=rna46;Dbxref=GeneID:4490148;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	1990515	1991033	.	+	.	ID=gene1824;Dbxref=GeneID:4490149;Name=AHA_1826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1826
NC_008570.1	RefSeq	CDS	1990515	1991033	.	+	0	ID=cds1776;Parent=gene1824;Dbxref=Genbank:YP_856360.1,GeneID:4490149;Name=YP_856360.1;Note=identified by similarity to GB:CAA59143.1%3B match to protein family HMM PF05638;gbkey=CDS;product=hemolysin co-regulated protein;protein_id=YP_856360.1;transl_table=11
NC_008570.1	RefSeq	gene	1991311	1993542	.	+	.	ID=gene1825;Dbxref=GeneID:4488279;Name=AHA_1827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1827
NC_008570.1	RefSeq	CDS	1991311	1993542	.	+	0	ID=cds1777;Parent=gene1825;Dbxref=Genbank:YP_856361.1,GeneID:4488279;Name=YP_856361.1;Note=identified by match to protein family HMM PF04524%3B match to protein family HMM TIGR01646;gbkey=CDS;product=VgrG protein;protein_id=YP_856361.1;transl_table=11
NC_008570.1	RefSeq	gene	1993544	1994863	.	+	.	ID=gene1826;Dbxref=GeneID:4488280;Name=AHA_1828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1828
NC_008570.1	RefSeq	CDS	1993544	1994863	.	+	0	ID=cds1778;Parent=gene1826;Dbxref=Genbank:YP_856362.1,GeneID:4488280;Name=YP_856362.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856362.1;transl_table=11
NC_008570.1	RefSeq	gene	1994873	1995862	.	+	.	ID=gene1827;Dbxref=GeneID:4488281;Name=AHA_1829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1829
NC_008570.1	RefSeq	CDS	1994873	1995862	.	+	0	ID=cds1779;Parent=gene1827;Dbxref=Genbank:YP_856363.1,GeneID:4488281;Name=YP_856363.1;Note=identified by similarity to GB:AAN69637.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856363.1;transl_table=11
NC_008570.1	RefSeq	gene	1995977	1996522	.	+	.	ID=gene1828;Dbxref=GeneID:4488282;Name=AHA_1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1830
NC_008570.1	RefSeq	CDS	1995977	1996522	.	+	0	ID=cds1780;Parent=gene1828;Dbxref=Genbank:YP_856364.1,GeneID:4488282;Name=YP_856364.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856364.1;transl_table=11
NC_008570.1	RefSeq	gene	1996643	1998031	.	+	.	ID=gene1829;Dbxref=GeneID:4488283;Name=AHA_1831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1831
NC_008570.1	RefSeq	CDS	1996643	1998031	.	+	0	ID=cds1781;Parent=gene1829;Dbxref=Genbank:YP_856365.1,GeneID:4488283;Name=YP_856365.1;Note=identified by similarity to GB:CAH12461.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856365.1;transl_table=11
NC_008570.1	RefSeq	gene	1998704	1999207	.	+	.	ID=gene1830;Dbxref=GeneID:4488284;Name=AHA_1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1832
NC_008570.1	RefSeq	CDS	1998704	1999207	.	+	0	ID=cds1782;Parent=gene1830;Dbxref=Genbank:YP_856366.1,GeneID:4488284;Name=YP_856366.1;Note=identified by similarity to GB:CAG76344.1%3B match to protein family HMM PF05591;gbkey=CDS;product=hypothetical protein;protein_id=YP_856366.1;transl_table=11
NC_008570.1	RefSeq	gene	1999252	2000724	.	+	.	ID=gene1831;Dbxref=GeneID:4488285;Name=AHA_1833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1833
NC_008570.1	RefSeq	CDS	1999252	2000724	.	+	0	ID=cds1783;Parent=gene1831;Dbxref=Genbank:YP_856367.1,GeneID:4488285;Name=YP_856367.1;Note=identified by similarity to GB:CAG76343.1%3B match to protein family HMM PF05943;gbkey=CDS;product=hypothetical protein;protein_id=YP_856367.1;transl_table=11
NC_008570.1	RefSeq	gene	2000731	2001162	.	+	.	ID=gene1832;Dbxref=GeneID:4488286;Name=AHA_1834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1834
NC_008570.1	RefSeq	CDS	2000731	2001162	.	+	0	ID=cds1784;Parent=gene1832;Dbxref=Genbank:YP_856368.1,GeneID:4488286;Name=YP_856368.1;Note=identified by similarity to GB:CAG76342.1%3B match to protein family HMM PF07025;gbkey=CDS;product=hypothetical protein;protein_id=YP_856368.1;transl_table=11
NC_008570.1	RefSeq	gene	2001166	2002932	.	+	.	ID=gene1833;Dbxref=GeneID:4488287;Name=AHA_1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1835
NC_008570.1	RefSeq	CDS	2001166	2002932	.	+	0	ID=cds1785;Parent=gene1833;Dbxref=Genbank:YP_856369.1,GeneID:4488287;Name=YP_856369.1;Note=identified by similarity to GB:CAH22873.1%3B match to protein family HMM PF05947;gbkey=CDS;product=hypothetical protein;protein_id=YP_856369.1;transl_table=11
NC_008570.1	RefSeq	gene	2002896	2003894	.	+	.	ID=gene1834;Dbxref=GeneID:4488288;Name=AHA_1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1836
NC_008570.1	RefSeq	CDS	2002896	2003894	.	+	0	ID=cds1786;Parent=gene1834;Dbxref=Genbank:YP_856370.1,GeneID:4488288;Name=YP_856370.1;Note=identified by similarity to GB:CAG76340.1%3B match to protein family HMM PF06996;gbkey=CDS;product=hypothetical protein;protein_id=YP_856370.1;transl_table=11
NC_008570.1	RefSeq	gene	2003951	2005201	.	+	.	ID=gene1835;Dbxref=GeneID:4488289;Name=AHA_1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1837
NC_008570.1	RefSeq	CDS	2003951	2005201	.	+	0	ID=cds1787;Parent=gene1835;Dbxref=Genbank:YP_856371.1,GeneID:4488289;Name=YP_856371.1;Note=identified by similarity to GB:CAG76339.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856371.1;transl_table=11
NC_008570.1	RefSeq	gene	2005201	2005716	.	+	.	ID=gene1836;Dbxref=GeneID:4488290;Name=AHA_1838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1838
NC_008570.1	RefSeq	CDS	2005201	2005716	.	+	0	ID=cds1788;Parent=gene1836;Dbxref=Genbank:YP_856372.1,GeneID:4488290;Name=YP_856372.1;gbkey=CDS;product=lipoprotein;protein_id=YP_856372.1;transl_table=11
NC_008570.1	RefSeq	gene	2005719	2007053	.	+	.	ID=gene1837;Dbxref=GeneID:4488291;Name=AHA_1839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1839
NC_008570.1	RefSeq	CDS	2005719	2007053	.	+	0	ID=cds1789;Parent=gene1837;Dbxref=Genbank:YP_856373.1,GeneID:4488291;Name=YP_856373.1;Note=identified by match to protein family HMM PF05936;gbkey=CDS;product=hypothetical protein;protein_id=YP_856373.1;transl_table=11
NC_008570.1	RefSeq	gene	2007145	2007855	.	+	.	ID=gene1838;Dbxref=GeneID:4488292;Name=AHA_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1840
NC_008570.1	RefSeq	CDS	2007145	2007855	.	+	0	ID=cds1790;Parent=gene1838;Dbxref=Genbank:YP_856374.1,GeneID:4488292;Name=YP_856374.1;Note=identified by similarity to GB:AAF96029.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856374.1;transl_table=11
NC_008570.1	RefSeq	gene	2007876	2010518	.	+	.	ID=gene1839;Dbxref=GeneID:4488293;Name=AHA_1841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1841
NC_008570.1	RefSeq	CDS	2007876	2010518	.	+	0	ID=cds1791;Parent=gene1839;Dbxref=Genbank:YP_856375.1,GeneID:4488293;Name=YP_856375.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;product=ClpA/ClpB family protein;protein_id=YP_856375.1;transl_table=11
NC_008570.1	RefSeq	gene	2010521	2012059	.	+	.	ID=gene1840;Dbxref=GeneID:4488294;Name=AHA_1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1842
NC_008570.1	RefSeq	CDS	2010521	2012059	.	+	0	ID=cds1792;Parent=gene1840;Dbxref=Genbank:YP_856376.1,GeneID:4488294;Name=YP_856376.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=sigma-54 dependent transcriptional regulator;protein_id=YP_856376.1;transl_table=11
NC_008570.1	RefSeq	gene	2012059	2012664	.	+	.	ID=gene1841;Dbxref=GeneID:4489197;Name=AHA_1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1843
NC_008570.1	RefSeq	CDS	2012059	2012664	.	+	0	ID=cds1793;Parent=gene1841;Dbxref=Genbank:YP_856377.1,GeneID:4489197;Name=YP_856377.1;Note=identified by similarity to GB:AAS64093.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856377.1;transl_table=11
NC_008570.1	RefSeq	gene	2012673	2014109	.	+	.	ID=gene1842;Dbxref=GeneID:4489198;Name=AHA_1844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1844
NC_008570.1	RefSeq	CDS	2012673	2014109	.	+	0	ID=cds1794;Parent=gene1842;Dbxref=Genbank:YP_856378.1,GeneID:4489198;Name=YP_856378.1;Note=identified by match to protein family HMM PF06812;gbkey=CDS;product=ImpA-related domain-containing protein;protein_id=YP_856378.1;transl_table=11
NC_008570.1	RefSeq	gene	2014151	2017636	.	+	.	ID=gene1843;Dbxref=GeneID:4489199;Name=AHA_1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1845
NC_008570.1	RefSeq	CDS	2014151	2017636	.	+	0	ID=cds1795;Parent=gene1843;Dbxref=Genbank:YP_856379.1,GeneID:4489199;Name=YP_856379.1;Note=identified by match to protein family HMM PF06744%3B match to protein family HMM PF06761;gbkey=CDS;product=ImcF family protein;protein_id=YP_856379.1;transl_table=11
NC_008570.1	RefSeq	gene	2017683	2019113	.	+	.	ID=gene1844;Dbxref=GeneID:4489200;Name=AHA_1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1846
NC_008570.1	RefSeq	CDS	2017683	2019113	.	+	0	ID=cds1796;Parent=gene1844;Dbxref=Genbank:YP_856380.1,GeneID:4489200;Name=YP_856380.1;Note=identified by match to protein family HMM PF06812;gbkey=CDS;product=ImpA domain-containing protein;protein_id=YP_856380.1;transl_table=11
NC_008570.1	RefSeq	gene	2019371	2019658	.	+	.	ID=gene1845;Dbxref=GeneID:4489201;Name=AHA_1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1847
NC_008570.1	RefSeq	CDS	2019371	2019658	.	+	0	ID=cds1797;Parent=gene1845;Dbxref=Genbank:YP_856381.1,GeneID:4489201;Name=YP_856381.1;Note=identified by match to protein family HMM PF05488;gbkey=CDS;product=PAAR motif-containing protein;protein_id=YP_856381.1;transl_table=11
NC_008570.1	RefSeq	gene	2019669	2021714	.	+	.	ID=gene1846;Dbxref=GeneID:4489202;Name=AHA_1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1848
NC_008570.1	RefSeq	CDS	2019669	2021714	.	+	0	ID=cds1798;Parent=gene1846;Dbxref=Genbank:YP_856382.1,GeneID:4489202;Name=YP_856382.1;Note=identified by match to protein family HMM PF04524%3B match to protein family HMM TIGR01646;gbkey=CDS;product=Rhs element Vgr family protein;protein_id=YP_856382.1;transl_table=11
NC_008570.1	RefSeq	gene	2021749	2024304	.	+	.	ID=gene1847;Dbxref=GeneID:4489203;Name=AHA_1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1849
NC_008570.1	RefSeq	CDS	2021749	2024304	.	+	0	ID=cds1799;Parent=gene1847;Dbxref=Genbank:YP_856383.1,GeneID:4489203;Name=YP_856383.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856383.1;transl_table=11
NC_008570.1	RefSeq	gene	2024307	2024711	.	+	.	ID=gene1848;Dbxref=GeneID:4489204;Name=AHA_1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1850
NC_008570.1	RefSeq	CDS	2024307	2024711	.	+	0	ID=cds1800;Parent=gene1848;Dbxref=Genbank:YP_856384.1,GeneID:4489204;Name=YP_856384.1;Note=identified by similarity to GB:AAO58637.1%3B match to protein family HMM PF07007;gbkey=CDS;product=hypothetical protein;protein_id=YP_856384.1;transl_table=11
NC_008570.1	RefSeq	gene	2026838	2026913	.	-	.	ID=gene1849;Dbxref=GeneID:4489205;Name=AHA_1851;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1851
NC_008570.1	RefSeq	tRNA	2026838	2026913	.	-	.	ID=rna47;Parent=gene1849;Dbxref=GeneID:4489205;gbkey=tRNA;product=tRNA-His
NC_008570.1	RefSeq	exon	2026838	2026913	.	-	.	ID=id48;Parent=rna47;Dbxref=GeneID:4489205;gbkey=tRNA;product=tRNA-His
NC_008570.1	RefSeq	gene	2026963	2027039	.	-	.	ID=gene1850;Dbxref=GeneID:4489206;Name=AHA_1852;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1852
NC_008570.1	RefSeq	tRNA	2026963	2027039	.	-	.	ID=rna48;Parent=gene1850;Dbxref=GeneID:4489206;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	2026963	2027039	.	-	.	ID=id49;Parent=rna48;Dbxref=GeneID:4489206;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	2027076	2027152	.	-	.	ID=gene1851;Dbxref=GeneID:4489207;Name=AHA_1853;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_1853
NC_008570.1	RefSeq	tRNA	2027076	2027152	.	-	.	ID=rna49;Parent=gene1851;Dbxref=GeneID:4489207;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	exon	2027076	2027152	.	-	.	ID=id50;Parent=rna49;Dbxref=GeneID:4489207;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	gene	2027356	2028219	.	+	.	ID=gene1852;Dbxref=GeneID:4489208;Name=AHA_1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1854
NC_008570.1	RefSeq	CDS	2027356	2028219	.	+	0	ID=cds1801;Parent=gene1852;Dbxref=Genbank:YP_856385.1,GeneID:4489208;Name=YP_856385.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_856385.1;transl_table=11
NC_008570.1	RefSeq	gene	2028327	2028545	.	-	.	ID=gene1853;Dbxref=GeneID:4489209;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AHA_1855
NC_008570.1	RefSeq	CDS	2028327	2028545	.	-	0	ID=cds1802;Parent=gene1853;Dbxref=Genbank:YP_856386.1,GeneID:4489209;Name=YP_856386.1;Note=identified by match to protein family HMM PF00313%3B match to protein family HMM TIGR02381;gbkey=CDS;gene=cspD;product=cold shock domain-containing protein CspD;protein_id=YP_856386.1;transl_table=11
NC_008570.1	RefSeq	gene	2028774	2029091	.	+	.	ID=gene1854;Dbxref=GeneID:4489210;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AHA_1856
NC_008570.1	RefSeq	CDS	2028774	2029091	.	+	0	ID=cds1803;Parent=gene1854;Dbxref=Genbank:YP_856387.1,GeneID:4489210;Name=YP_856387.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=YP_856387.1;transl_table=11
NC_008570.1	RefSeq	gene	2029151	2031403	.	+	.	ID=gene1855;Dbxref=GeneID:4489211;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AHA_1857
NC_008570.1	RefSeq	CDS	2029151	2031403	.	+	0	ID=cds1804;Parent=gene1855;Dbxref=Genbank:YP_856388.1,GeneID:4489211;Name=YP_856388.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02639;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpA;protein_id=YP_856388.1;transl_table=11
NC_008570.1	RefSeq	gene	2031473	2031712	.	-	.	ID=gene1856;Dbxref=GeneID:4489212;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AHA_1858
NC_008570.1	RefSeq	CDS	2031473	2031712	.	-	0	ID=cds1805;Parent=gene1856;Dbxref=Genbank:YP_856389.1,GeneID:4489212;Name=YP_856389.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=YP_856389.1;transl_table=11
NC_008570.1	RefSeq	gene	2031761	2032477	.	-	.	ID=gene1857;Dbxref=GeneID:4489213;Name=AHA_1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1859
NC_008570.1	RefSeq	CDS	2031761	2032477	.	-	0	ID=cds1806;Parent=gene1857;Dbxref=Genbank:YP_856390.1,GeneID:4489213;Name=YP_856390.1;Note=Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate;gbkey=CDS;product=arginyl-tRNA-protein transferase;protein_id=YP_856390.1;transl_table=11
NC_008570.1	RefSeq	gene	2032474	2033181	.	-	.	ID=gene1858;Dbxref=GeneID:4489214;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AHA_1860
NC_008570.1	RefSeq	CDS	2032474	2033181	.	-	0	ID=cds1807;Parent=gene1858;Dbxref=Genbank:YP_856391.1,GeneID:4489214;Name=YP_856391.1;Note=leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys;gbkey=CDS;gene=aat;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=YP_856391.1;transl_table=11
NC_008570.1	RefSeq	gene	2033201	2033671	.	+	.	ID=gene1859;Dbxref=GeneID:4489215;Name=AHA_1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1861
NC_008570.1	RefSeq	CDS	2033201	2033671	.	+	0	ID=cds1808;Parent=gene1859;Dbxref=Genbank:YP_856392.1,GeneID:4489215;Name=YP_856392.1;Note=identified by match to protein family HMM PF05433;gbkey=CDS;product=surface antigen;protein_id=YP_856392.1;transl_table=11
NC_008570.1	RefSeq	gene	2033782	2035029	.	-	.	ID=gene1860;Dbxref=GeneID:4488962;Name=AHA_1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1862
NC_008570.1	RefSeq	CDS	2033782	2035029	.	-	0	ID=cds1809;Parent=gene1860;Dbxref=Genbank:YP_856393.1,GeneID:4488962;Name=YP_856393.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=response regulator protein;protein_id=YP_856393.1;transl_table=11
NC_008570.1	RefSeq	gene	2035087	2036268	.	-	.	ID=gene1861;Dbxref=GeneID:4488963;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AHA_1863
NC_008570.1	RefSeq	CDS	2035087	2036268	.	-	0	ID=cds1810;Parent=gene1861;Dbxref=Genbank:YP_856394.1,GeneID:4488963;Name=YP_856394.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292;gbkey=CDS;gene=trxB;product=thioredoxin-disulfide reductase;protein_id=YP_856394.1;transl_table=11
NC_008570.1	RefSeq	gene	2036934	2037425	.	+	.	ID=gene1862;Dbxref=GeneID:4488964;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AHA_1864
NC_008570.1	RefSeq	CDS	2036934	2037425	.	+	0	ID=cds1811;Parent=gene1862;Dbxref=Genbank:YP_856395.1,GeneID:4488964;Name=YP_856395.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;gene=lrp;product=leucine-responsive transcriptional regulator;protein_id=YP_856395.1;transl_table=11
NC_008570.1	RefSeq	gene	2037627	2040149	.	+	.	ID=gene1863;Dbxref=GeneID:4488965;Name=AHA_1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1865
NC_008570.1	RefSeq	CDS	2037627	2040149	.	+	0	ID=cds1812;Parent=gene1863;Dbxref=Genbank:YP_856396.1,GeneID:4488965;Name=YP_856396.1;Note=identified by similarity to SP:P46889%3B match to protein family HMM PF01580;gbkey=CDS;product=FtsK/SpoIIIE family protein;protein_id=YP_856396.1;transl_table=11
NC_008570.1	RefSeq	gene	2040227	2040835	.	+	.	ID=gene1864;Dbxref=GeneID:4488966;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AHA_1866
NC_008570.1	RefSeq	CDS	2040227	2040835	.	+	0	ID=cds1813;Parent=gene1864;Dbxref=Genbank:YP_856397.1,GeneID:4488966;Name=YP_856397.1;Note=identified by match to protein family HMM PF03548%3B match to protein family HMM TIGR00547;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=YP_856397.1;transl_table=11
NC_008570.1	RefSeq	gene	2040959	2042314	.	+	.	ID=gene1865;Dbxref=GeneID:4488967;Name=AHA_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1867
NC_008570.1	RefSeq	CDS	2040959	2042314	.	+	0	ID=cds1814;Parent=gene1865;Dbxref=Genbank:YP_856398.1,GeneID:4488967;Name=YP_856398.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;product=recombination factor protein RarA;protein_id=YP_856398.1;transl_table=11
NC_008570.1	RefSeq	gene	2042654	2043949	.	+	.	ID=gene1866;Dbxref=GeneID:4488968;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AHA_1868
NC_008570.1	RefSeq	CDS	2042654	2043949	.	+	0	ID=cds1815;Parent=gene1866;Dbxref=Genbank:YP_856399.1,GeneID:4488968;Name=YP_856399.1;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=YP_856399.1;transl_table=11
NC_008570.1	RefSeq	gene	2044136	2044624	.	+	.	ID=gene1867;Dbxref=GeneID:4488969;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AHA_1869
NC_008570.1	RefSeq	CDS	2044136	2044624	.	+	0	ID=cds1816;Parent=gene1867;Dbxref=Genbank:YP_856400.1,GeneID:4488969;Name=YP_856400.1;Note=identified by match to protein family HMM PF02674;gbkey=CDS;gene=cvpA;product=CvpA family protein;protein_id=YP_856400.1;transl_table=11
NC_008570.1	RefSeq	gene	2044646	2046166	.	+	.	ID=gene1868;Dbxref=GeneID:4488970;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AHA_1870
NC_008570.1	RefSeq	CDS	2044646	2046166	.	+	0	ID=cds1817;Parent=gene1868;Dbxref=Genbank:YP_856401.1,GeneID:4488970;Name=YP_856401.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=YP_856401.1;transl_table=11
NC_008570.1	RefSeq	gene	2046352	2047110	.	+	.	ID=gene1869;Dbxref=GeneID:4488971;Name=AHA_1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1871
NC_008570.1	RefSeq	CDS	2046352	2047110	.	+	0	ID=cds1818;Parent=gene1869;Dbxref=Genbank:YP_856402.1,GeneID:4488971;Name=YP_856402.1;Note=identified by match to protein family HMM PF06175;gbkey=CDS;product=tRNA-(ms[2]io[6]A)-hydroxylase;protein_id=YP_856402.1;transl_table=11
NC_008570.1	RefSeq	gene	2047265	2048050	.	-	.	ID=gene1870;Dbxref=GeneID:4488972;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AHA_1872
NC_008570.1	RefSeq	CDS	2047265	2048050	.	-	0	ID=cds1819;Parent=gene1870;Dbxref=Genbank:YP_856403.1,GeneID:4488972;Name=YP_856403.1;Note=identified by similarity to SP:P36638%3B match to protein family HMM PF00005;gbkey=CDS;gene=sapF;product=peptide ABC transporter ATP-binding protein SapF;protein_id=YP_856403.1;transl_table=11
NC_008570.1	RefSeq	gene	2048106	2049104	.	-	.	ID=gene1871;Dbxref=GeneID:4488973;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AHA_1873
NC_008570.1	RefSeq	CDS	2048106	2049104	.	-	0	ID=cds1820;Parent=gene1871;Dbxref=Genbank:YP_856404.1,GeneID:4488973;Name=YP_856404.1;Note=identified by similarity to SP:P36636%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;gene=sapD;product=peptide ABC transporter ATP-binding protein SapD;protein_id=YP_856404.1;transl_table=11
NC_008570.1	RefSeq	gene	2049104	2049997	.	-	.	ID=gene1872;Dbxref=GeneID:4488974;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AHA_1874
NC_008570.1	RefSeq	CDS	2049104	2049997	.	-	0	ID=cds1821;Parent=gene1872;Dbxref=Genbank:YP_856405.1,GeneID:4488974;Name=YP_856405.1;Note=identified by similarity to SP:P0A2J5%3B match to protein family HMM PF00528;gbkey=CDS;gene=sapC;product=peptide ABC transporter permease SapC;protein_id=YP_856405.1;transl_table=11
NC_008570.1	RefSeq	gene	2050033	2050992	.	-	.	ID=gene1873;Dbxref=GeneID:4488975;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AHA_1875
NC_008570.1	RefSeq	CDS	2050033	2050992	.	-	0	ID=cds1822;Parent=gene1873;Dbxref=Genbank:YP_856406.1,GeneID:4488975;Name=YP_856406.1;Note=identified by similarity to SP:P0A2J3%3B match to protein family HMM PF00528;gbkey=CDS;gene=sapB;product=peptide ABC transporter permease SapB;protein_id=YP_856406.1;transl_table=11
NC_008570.1	RefSeq	gene	2050995	2052560	.	-	.	ID=gene1874;Dbxref=GeneID:4488976;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AHA_1876
NC_008570.1	RefSeq	CDS	2050995	2052560	.	-	0	ID=cds1823;Parent=gene1874;Dbxref=Genbank:YP_856407.1,GeneID:4488976;Name=YP_856407.1;Note=identified by similarity to SP:P36634%3B match to protein family HMM PF00496;gbkey=CDS;gene=sapA;product=peptide ABC transporter periplasmic peptide-binding protein SapA;protein_id=YP_856407.1;transl_table=11
NC_008570.1	RefSeq	gene	2052681	2053715	.	-	.	ID=gene1875;Dbxref=GeneID:4488977;Name=AHA_1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1877
NC_008570.1	RefSeq	CDS	2052681	2053715	.	-	0	ID=cds1824;Parent=gene1875;Dbxref=Genbank:YP_856408.1,GeneID:4488977;Name=YP_856408.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02974;gbkey=CDS;product=PSP operon transcriptional activator;protein_id=YP_856408.1;transl_table=11
NC_008570.1	RefSeq	gene	2053911	2054591	.	+	.	ID=gene1876;Dbxref=GeneID:4488978;Name=AHA_1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1878
NC_008570.1	RefSeq	CDS	2053911	2054591	.	+	0	ID=cds1825;Parent=gene1876;Dbxref=Genbank:YP_856409.1,GeneID:4488978;Name=YP_856409.1;Note=identified by match to protein family HMM PF04012%3B match to protein family HMM TIGR02977;gbkey=CDS;product=phage shock protein A;protein_id=YP_856409.1;transl_table=11
NC_008570.1	RefSeq	gene	2054595	2054831	.	+	.	ID=gene1877;Dbxref=GeneID:4488979;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AHA_1879
NC_008570.1	RefSeq	CDS	2054595	2054831	.	+	0	ID=cds1826;Parent=gene1877;Dbxref=Genbank:YP_856410.1,GeneID:4488979;Name=YP_856410.1;Note=acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=YP_856410.1;transl_table=11
NC_008570.1	RefSeq	gene	2054860	2055342	.	+	.	ID=gene1878;Dbxref=GeneID:4488980;Name=AHA_1880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1880
NC_008570.1	RefSeq	CDS	2054860	2055342	.	+	0	ID=cds1827;Parent=gene1878;Dbxref=Genbank:YP_856411.1,GeneID:4488980;Name=YP_856411.1;Note=identified by match to protein family HMM PF04024%3B match to protein family HMM TIGR02978;gbkey=CDS;product=phage shock protein C;protein_id=YP_856411.1;transl_table=11
NC_008570.1	RefSeq	gene	2055450	2056880	.	+	.	ID=gene1879;Dbxref=GeneID:4488981;Name=AHA_1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1881
NC_008570.1	RefSeq	CDS	2055450	2056880	.	+	0	ID=cds1828;Parent=gene1879;Dbxref=Genbank:YP_856412.1,GeneID:4488981;Name=YP_856412.1;Note=identified by match to protein family HMM PF04317;gbkey=CDS;product=amino acid regulated cytosolic protein;protein_id=YP_856412.1;transl_table=11
NC_008570.1	RefSeq	gene	2056947	2057972	.	+	.	ID=gene1880;Dbxref=GeneID:4488654;Name=AHA_1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1882
NC_008570.1	RefSeq	CDS	2056947	2057972	.	+	0	ID=cds1829;Parent=gene1880;Dbxref=Genbank:YP_856413.1,GeneID:4488654;Name=YP_856413.1;Note=identified by match to protein family HMM PF05128%3B match to protein family HMM TIGR01620;gbkey=CDS;product=hypothetical protein;protein_id=YP_856413.1;transl_table=11
NC_008570.1	RefSeq	gene	2058144	2058938	.	+	.	ID=gene1881;Dbxref=GeneID:4488655;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=AHA_1883
NC_008570.1	RefSeq	CDS	2058144	2058938	.	+	0	ID=cds1830;Parent=gene1881;Dbxref=Genbank:YP_856414.1,GeneID:4488655;Name=YP_856414.1;Note=phenylalanine 4-hydroxylase%3B phenylalanine 4-hydroxylase%3B catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin;gbkey=CDS;gene=phhA;product=phenylalanine 4-monooxygenase;protein_id=YP_856414.1;transl_table=11
NC_008570.1	RefSeq	gene	2058993	2059331	.	+	.	ID=gene1882;Dbxref=GeneID:4488656;Name=phhB;gbkey=Gene;gene=phhB;gene_biotype=protein_coding;locus_tag=AHA_1884
NC_008570.1	RefSeq	CDS	2058993	2059331	.	+	0	ID=cds1831;Parent=gene1882;Dbxref=Genbank:YP_856415.1,GeneID:4488656;Name=YP_856415.1;Note=4-alpha-hydroxytetrahydrobiopterin dehydratase activity%3B catalyzes the formation of (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-7%2C8-dihydro-6H-pterin from (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-5%2C6%2C7%2C8-tetrahydro-4a-hydroxypterin%3B functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction;gbkey=CDS;gene=phhB;product=pterin-4-alpha-carbinolamine dehydratase;protein_id=YP_856415.1;transl_table=11
NC_008570.1	RefSeq	gene	2059351	2059452	.	+	.	ID=gene1883;Dbxref=GeneID:4488657;Name=AHA_1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1885
NC_008570.1	RefSeq	CDS	2059351	2059452	.	+	0	ID=cds1832;Parent=gene1883;Dbxref=Genbank:YP_856416.1,GeneID:4488657;Name=YP_856416.1;gbkey=CDS;product=pterin-4-alpha-carbinolamine dehydratase;protein_id=YP_856416.1;transl_table=11
NC_008570.1	RefSeq	gene	2059587	2061134	.	+	.	ID=gene1884;Dbxref=GeneID:4488658;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AHA_1886
NC_008570.1	RefSeq	CDS	2059587	2061134	.	+	0	ID=cds1833;Parent=gene1884;Dbxref=Genbank:YP_856417.1,GeneID:4488658;Name=YP_856417.1;Note=identified by similarity to SP:P07604%3B match to protein family HMM PF00158%3B match to protein family HMM PF01842;gbkey=CDS;gene=tyrR;product=transcriptional regulatory protein TyrR;protein_id=YP_856417.1;transl_table=11
NC_008570.1	RefSeq	gene	2061312	2061881	.	+	.	ID=gene1885;Dbxref=GeneID:4488659;Name=AHA_1887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1887
NC_008570.1	RefSeq	CDS	2061312	2061881	.	+	0	ID=cds1834;Parent=gene1885;Dbxref=Genbank:YP_856418.1,GeneID:4488659;Name=YP_856418.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856418.1;transl_table=11
NC_008570.1	RefSeq	gene	2061878	2063146	.	+	.	ID=gene1886;Dbxref=GeneID:4488660;Name=AHA_1888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1888
NC_008570.1	RefSeq	CDS	2061878	2063146	.	+	0	ID=cds1835;Parent=gene1886;Dbxref=Genbank:YP_856419.1,GeneID:4488660;Name=YP_856419.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=inner membrane protein YfiN;protein_id=YP_856419.1;transl_table=11
NC_008570.1	RefSeq	gene	2063149	2063637	.	+	.	ID=gene1887;Dbxref=GeneID:4488661;Name=AHA_1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1889
NC_008570.1	RefSeq	CDS	2063149	2063637	.	+	0	ID=cds1836;Parent=gene1887;Dbxref=Genbank:YP_856420.1,GeneID:4488661;Name=YP_856420.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=OmpA family protein;protein_id=YP_856420.1;transl_table=11
NC_008570.1	RefSeq	gene	2063695	2064474	.	-	.	ID=gene1888;Dbxref=GeneID:4488662;Name=AHA_1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1890
NC_008570.1	RefSeq	CDS	2063695	2064474	.	-	0	ID=cds1837;Parent=gene1888;Dbxref=Genbank:YP_856421.1,GeneID:4488662;Name=YP_856421.1;Note=identified by match to protein family HMM PF03741;gbkey=CDS;product=TerC protein;protein_id=YP_856421.1;transl_table=11
NC_008570.1	RefSeq	gene	2064548	2065663	.	+	.	ID=gene1889;Dbxref=GeneID:4488663;Name=AHA_1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1891
NC_008570.1	RefSeq	CDS	2064548	2065663	.	+	0	ID=cds1838;Parent=gene1889;Dbxref=Genbank:YP_856422.1,GeneID:4488663;Name=YP_856422.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;product=ATP-NAD kinase;protein_id=YP_856422.1;transl_table=11
NC_008570.1	RefSeq	gene	2065774	2066052	.	+	.	ID=gene1890;Dbxref=GeneID:4488664;Name=AHA_1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1892
NC_008570.1	RefSeq	CDS	2065774	2066052	.	+	0	ID=cds1839;Parent=gene1890;Dbxref=Genbank:YP_856423.1,GeneID:4488664;Name=YP_856423.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856423.1;transl_table=11
NC_008570.1	RefSeq	gene	2066150	2067814	.	+	.	ID=gene1891;Dbxref=GeneID:4488665;Name=AHA_1893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1893
NC_008570.1	RefSeq	CDS	2066150	2067814	.	+	0	ID=cds1840;Parent=gene1891;Dbxref=Genbank:YP_856424.1,GeneID:4488665;Name=YP_856424.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain acyl-CoA synthetase;protein_id=YP_856424.1;transl_table=11
NC_008570.1	RefSeq	gene	2067899	2068780	.	-	.	ID=gene1892;Dbxref=GeneID:4488666;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AHA_1894
NC_008570.1	RefSeq	CDS	2067899	2068780	.	-	0	ID=cds1841;Parent=gene1892;Dbxref=Genbank:YP_856425.1,GeneID:4488666;Name=YP_856425.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=YP_856425.1;transl_table=11
NC_008570.1	RefSeq	gene	2068968	2069654	.	-	.	ID=gene1893;Dbxref=GeneID:4488667;Name=AHA_1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1895
NC_008570.1	RefSeq	CDS	2068968	2069654	.	-	0	ID=cds1842;Parent=gene1893;Dbxref=Genbank:YP_856426.1,GeneID:4488667;Name=YP_856426.1;Note=identified by match to protein family HMM PF04172;gbkey=CDS;product=LrgB family protein;protein_id=YP_856426.1;transl_table=11
NC_008570.1	RefSeq	gene	2069651	2070007	.	-	.	ID=gene1894;Dbxref=GeneID:4488668;Name=AHA_1896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1896
NC_008570.1	RefSeq	CDS	2069651	2070007	.	-	0	ID=cds1843;Parent=gene1894;Dbxref=Genbank:YP_856427.1,GeneID:4488668;Name=YP_856427.1;Note=identified by match to protein family HMM PF03788;gbkey=CDS;product=LrgA family protein;protein_id=YP_856427.1;transl_table=11
NC_008570.1	RefSeq	gene	2070167	2071876	.	+	.	ID=gene1895;Dbxref=GeneID:4488669;Name=AHA_1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1897
NC_008570.1	RefSeq	CDS	2070167	2071876	.	+	0	ID=cds1844;Parent=gene1895;Dbxref=Genbank:YP_856428.1,GeneID:4488669;Name=YP_856428.1;Note=identified by match to protein family HMM PF02065;gbkey=CDS;product=alpha-galactosidase;protein_id=YP_856428.1;transl_table=11
NC_008570.1	RefSeq	gene	2071949	2072488	.	-	.	ID=gene1896;Dbxref=GeneID:4488670;Name=AHA_1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1898
NC_008570.1	RefSeq	CDS	2071949	2072488	.	-	0	ID=cds1845;Parent=gene1896;Dbxref=Genbank:YP_856429.1,GeneID:4488670;Name=YP_856429.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856429.1;transl_table=11
NC_008570.1	RefSeq	gene	2072610	2074304	.	-	.	ID=gene1897;Dbxref=GeneID:4488671;Name=AHA_1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1899
NC_008570.1	RefSeq	CDS	2072610	2074304	.	-	0	ID=cds1846;Parent=gene1897;Dbxref=Genbank:YP_856430.1,GeneID:4488671;Name=YP_856430.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;product=exodeoxyribonuclease I;protein_id=YP_856430.1;transl_table=11
NC_008570.1	RefSeq	gene	2074271	2075770	.	-	.	ID=gene1898;Dbxref=GeneID:4488672;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AHA_1900
NC_008570.1	RefSeq	CDS	2074271	2075770	.	-	0	ID=cds1847;Parent=gene1898;Dbxref=Genbank:YP_856431.1,GeneID:4488672;Name=YP_856431.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;gbkey=CDS;gene=araA;product=L-arabinose isomerase;protein_id=YP_856431.1;transl_table=11
NC_008570.1	RefSeq	gene	2075784	2076482	.	-	.	ID=gene1899;Dbxref=GeneID:4490358;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AHA_1901
NC_008570.1	RefSeq	CDS	2075784	2076482	.	-	0	ID=cds1848;Parent=gene1899;Dbxref=Genbank:YP_856432.1,GeneID:4490358;Name=YP_856432.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_856432.1;transl_table=11
NC_008570.1	RefSeq	gene	2076479	2078170	.	-	.	ID=gene1900;Dbxref=GeneID:4490359;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AHA_1902
NC_008570.1	RefSeq	CDS	2076479	2078170	.	-	0	ID=cds1849;Parent=gene1900;Dbxref=Genbank:YP_856433.1,GeneID:4490359;Name=YP_856433.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;gene=araB;product=ribulokinase;protein_id=YP_856433.1;transl_table=11
NC_008570.1	RefSeq	gene	2078532	2079515	.	+	.	ID=gene1901;Dbxref=GeneID:4490360;Name=AHA_1903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1903
NC_008570.1	RefSeq	CDS	2078532	2079515	.	+	0	ID=cds1850;Parent=gene1901;Dbxref=Genbank:YP_856434.1,GeneID:4490360;Name=YP_856434.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;product=L-arabinose ABC transporter periplasmic L-arabinose-binding protein;protein_id=YP_856434.1;transl_table=11
NC_008570.1	RefSeq	gene	2079588	2081087	.	+	.	ID=gene1902;Dbxref=GeneID:4490361;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AHA_1904
NC_008570.1	RefSeq	CDS	2079588	2081087	.	+	0	ID=cds1851;Parent=gene1902;Dbxref=Genbank:YP_856435.1,GeneID:4490361;Name=YP_856435.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=L-arabinose transporter ATP-binding protein;protein_id=YP_856435.1;transl_table=11
NC_008570.1	RefSeq	gene	2081136	2082137	.	+	.	ID=gene1903;Dbxref=GeneID:4490362;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AHA_1905
NC_008570.1	RefSeq	CDS	2081136	2082137	.	+	0	ID=cds1852;Parent=gene1903;Dbxref=Genbank:YP_856436.1,GeneID:4490362;Name=YP_856436.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=L-arabinose transporter permease;protein_id=YP_856436.1;transl_table=11
NC_008570.1	RefSeq	gene	2082282	2083193	.	+	.	ID=gene1904;Dbxref=GeneID:4490363;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AHA_1906
NC_008570.1	RefSeq	CDS	2082282	2083193	.	+	0	ID=cds1853;Parent=gene1904;Dbxref=Genbank:YP_856437.1,GeneID:4490363;Name=YP_856437.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;gene=araC;product=DNA-binding transcriptional regulator AraC;protein_id=YP_856437.1;transl_table=11
NC_008570.1	RefSeq	gene	2083288	2084022	.	-	.	ID=gene1905;Dbxref=GeneID:4490364;Name=AHA_1907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1907
NC_008570.1	RefSeq	CDS	2083288	2084022	.	-	0	ID=cds1854;Parent=gene1905;Dbxref=Genbank:YP_856438.1,GeneID:4490364;Name=YP_856438.1;Note=identified by match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856438.1;transl_table=11
NC_008570.1	RefSeq	gene	2084029	2084193	.	-	.	ID=gene1906;Dbxref=GeneID:4490365;Name=AHA_1908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1908
NC_008570.1	RefSeq	CDS	2084029	2084193	.	-	0	ID=cds1855;Parent=gene1906;Dbxref=Genbank:YP_856439.1,GeneID:4490365;Name=YP_856439.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856439.1;transl_table=11
NC_008570.1	RefSeq	gene	2084317	2085183	.	+	.	ID=gene1907;Dbxref=GeneID:4490366;Name=AHA_1909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1909
NC_008570.1	RefSeq	CDS	2084317	2085183	.	+	0	ID=cds1856;Parent=gene1907;Dbxref=Genbank:YP_856440.1,GeneID:4490366;Name=YP_856440.1;Note=identified by match to protein family HMM PF02678%3B match to protein family HMM PF05726;gbkey=CDS;product=pirin;protein_id=YP_856440.1;transl_table=11
NC_008570.1	RefSeq	gene	2085234	2085359	.	-	.	ID=gene1908;Dbxref=GeneID:4490367;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AHA_1910
NC_008570.1	RefSeq	CDS	2085234	2085359	.	-	0	ID=cds1857;Parent=gene1908;Dbxref=Genbank:YP_856441.1,GeneID:4490367;Name=YP_856441.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=YP_856441.1;transl_table=11
NC_008570.1	RefSeq	gene	2085356	2085625	.	-	.	ID=gene1909;Dbxref=GeneID:4490368;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;locus_tag=AHA_1911
NC_008570.1	RefSeq	CDS	2085356	2085625	.	-	0	ID=cds1858;Parent=gene1909;Dbxref=Genbank:YP_856442.1,GeneID:4490368;Name=YP_856442.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=YP_856442.1;transl_table=11
NC_008570.1	RefSeq	gene	2085882	2086130	.	+	.	ID=gene1910;Dbxref=GeneID:4490369;Name=AHA_1912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1912
NC_008570.1	RefSeq	CDS	2085882	2086130	.	+	0	ID=cds1859;Parent=gene1910;Dbxref=Genbank:YP_856443.1,GeneID:4490369;Name=YP_856443.1;Note=identified by match to protein family HMM PF06183;gbkey=CDS;product=DNA-damage-inducible protein I;protein_id=YP_856443.1;transl_table=11
NC_008570.1	RefSeq	gene	2086266	2087087	.	-	.	ID=gene1911;Dbxref=GeneID:4490370;Name=AHA_1913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1913
NC_008570.1	RefSeq	CDS	2086266	2087087	.	-	0	ID=cds1860;Parent=gene1911;Dbxref=Genbank:YP_856444.1,GeneID:4490370;Name=YP_856444.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856444.1;transl_table=11
NC_008570.1	RefSeq	gene	2087112	2087615	.	-	.	ID=gene1912;Dbxref=GeneID:4490371;Name=AHA_1914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1914
NC_008570.1	RefSeq	CDS	2087112	2087615	.	-	0	ID=cds1861;Parent=gene1912;Dbxref=Genbank:YP_856445.1,GeneID:4490371;Name=YP_856445.1;Note=identified by match to protein family HMM PF01863;gbkey=CDS;product=hypothetical protein;protein_id=YP_856445.1;transl_table=11
NC_008570.1	RefSeq	gene	2087756	2089468	.	-	.	ID=gene1913;Dbxref=GeneID:4490372;Name=AHA_1915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1915
NC_008570.1	RefSeq	CDS	2087756	2089468	.	-	0	ID=cds1862;Parent=gene1913;Dbxref=Genbank:YP_856446.1,GeneID:4490372;Name=YP_856446.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856446.1;transl_table=11
NC_008570.1	RefSeq	gene	2089595	2091253	.	-	.	ID=gene1914;Dbxref=GeneID:4490373;Name=AHA_1916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1916
NC_008570.1	RefSeq	CDS	2089595	2091253	.	-	0	ID=cds1863;Parent=gene1914;Dbxref=Genbank:YP_856447.1,GeneID:4490373;Name=YP_856447.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=5'-nucleotidase;protein_id=YP_856447.1;transl_table=11
NC_008570.1	RefSeq	gene	2091384	2092736	.	-	.	ID=gene1915;Dbxref=GeneID:4490374;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AHA_1917
NC_008570.1	RefSeq	CDS	2091384	2092736	.	-	0	ID=cds1864;Parent=gene1915;Dbxref=Genbank:YP_856448.1,GeneID:4490374;Name=YP_856448.1;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth;gbkey=CDS;gene=dcuC;product=C4-dicarboxylate transporter DcuC;protein_id=YP_856448.1;transl_table=11
NC_008570.1	RefSeq	gene	2093102	2093671	.	+	.	ID=gene1916;Dbxref=GeneID:4490375;Name=AHA_1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1918
NC_008570.1	RefSeq	CDS	2093102	2093671	.	+	0	ID=cds1865;Parent=gene1916;Dbxref=Genbank:YP_856449.1,GeneID:4490375;Name=YP_856449.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856449.1;transl_table=11
NC_008570.1	RefSeq	gene	2093754	2095751	.	-	.	ID=gene1917;Dbxref=GeneID:4490376;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AHA_1919
NC_008570.1	RefSeq	CDS	2093754	2095751	.	-	0	ID=cds1866;Parent=gene1917;Dbxref=Genbank:YP_856450.1,GeneID:4490376;Name=YP_856450.1;Note=catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules;gbkey=CDS;gene=mnmC;product=5-methylaminomethyl-2-thiouridine methyltransferase;protein_id=YP_856450.1;transl_table=11
NC_008570.1	RefSeq	gene	2095863	2097074	.	+	.	ID=gene1918;Dbxref=GeneID:4490377;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AHA_1920
NC_008570.1	RefSeq	CDS	2095863	2097074	.	+	0	ID=cds1867;Parent=gene1918;Dbxref=Genbank:YP_856451.1,GeneID:4490377;Name=YP_856451.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801;gbkey=CDS;gene=fabB;product=3-oxoacyl-ACP synthase;protein_id=YP_856451.1;transl_table=11
NC_008570.1	RefSeq	gene	2097134	2097628	.	-	.	ID=gene1919;Dbxref=GeneID:4488635;Name=AHA_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1921
NC_008570.1	RefSeq	CDS	2097134	2097628	.	-	0	ID=cds1868;Parent=gene1919;Dbxref=Genbank:YP_856452.1,GeneID:4488635;Name=YP_856452.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856452.1;transl_table=11
NC_008570.1	RefSeq	gene	2098162	2099448	.	-	.	ID=gene1920;Dbxref=GeneID:4488636;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AHA_1922
NC_008570.1	RefSeq	CDS	2098162	2099448	.	-	0	ID=cds1869;Parent=gene1920;Dbxref=Genbank:YP_856453.1,GeneID:4488636;Name=YP_856453.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=YP_856453.1;transl_table=11
NC_008570.1	RefSeq	gene	2099873	2100262	.	+	.	ID=gene1921;Dbxref=GeneID:4488637;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=AHA_1923
NC_008570.1	RefSeq	CDS	2099873	2100262	.	+	0	ID=cds1870;Parent=gene1921;Dbxref=Genbank:YP_856454.1,GeneID:4488637;Name=YP_856454.1;Note=identified by match to protein family HMM PF01127%3B match to protein family HMM TIGR02970;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=YP_856454.1;transl_table=11
NC_008570.1	RefSeq	gene	2100256	2100600	.	+	.	ID=gene1922;Dbxref=GeneID:4488638;Name=AHA_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1924
NC_008570.1	RefSeq	CDS	2100256	2100600	.	+	0	ID=cds1871;Parent=gene1922;Dbxref=Genbank:YP_856455.1,GeneID:4488638;Name=YP_856455.1;Note=identified by match to protein family HMM TIGR02968;gbkey=CDS;product=succinate dehydrogenase hydrophobic membrane anchor protein;protein_id=YP_856455.1;transl_table=11
NC_008570.1	RefSeq	gene	2100602	2102368	.	+	.	ID=gene1923;Dbxref=GeneID:4488639;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AHA_1925
NC_008570.1	RefSeq	CDS	2100602	2102368	.	+	0	ID=cds1872;Parent=gene1923;Dbxref=Genbank:YP_856456.1,GeneID:4488639;Name=YP_856456.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=YP_856456.1;transl_table=11
NC_008570.1	RefSeq	gene	2102385	2103101	.	+	.	ID=gene1924;Dbxref=GeneID:4488640;Name=AHA_1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1926
NC_008570.1	RefSeq	CDS	2102385	2103101	.	+	0	ID=cds1873;Parent=gene1924;Dbxref=Genbank:YP_856457.1,GeneID:4488640;Name=YP_856457.1;Note=identified by match to protein family HMM TIGR00384;gbkey=CDS;product=succinate dehydrogenase iron-sulfur protein;protein_id=YP_856457.1;transl_table=11
NC_008570.1	RefSeq	gene	2103158	2106034	.	+	.	ID=gene1925;Dbxref=GeneID:4488641;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AHA_1927
NC_008570.1	RefSeq	CDS	2103158	2106034	.	+	0	ID=cds1874;Parent=gene1925;Dbxref=Genbank:YP_856458.1,GeneID:4488641;Name=YP_856458.1;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;gbkey=CDS;gene=sucA;product=2-oxoglutarate dehydrogenase E1;protein_id=YP_856458.1;transl_table=11
NC_008570.1	RefSeq	gene	2106127	2107314	.	+	.	ID=gene1926;Dbxref=GeneID:4488642;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=AHA_1928
NC_008570.1	RefSeq	CDS	2106127	2107314	.	+	0	ID=cds1875;Parent=gene1926;Dbxref=Genbank:YP_856459.1,GeneID:4488642;Name=YP_856459.1;Note=identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817%3B match to protein family HMM TIGR01347;gbkey=CDS;gene=sucB;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=YP_856459.1;transl_table=11
NC_008570.1	RefSeq	gene	2107538	2108704	.	+	.	ID=gene1927;Dbxref=GeneID:4488643;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AHA_1929
NC_008570.1	RefSeq	CDS	2107538	2108704	.	+	0	ID=cds1876;Parent=gene1927;Dbxref=Genbank:YP_856460.1,GeneID:4488643;Name=YP_856460.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=YP_856460.1;transl_table=11
NC_008570.1	RefSeq	gene	2108704	2109576	.	+	.	ID=gene1928;Dbxref=GeneID:4488644;Name=AHA_1930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1930
NC_008570.1	RefSeq	CDS	2108704	2109576	.	+	0	ID=cds1877;Parent=gene1928;Dbxref=Genbank:YP_856461.1,GeneID:4488644;Name=YP_856461.1;Note=identified by match to protein family HMM PF00549%3B match to protein family HMM PF02629%3B match to protein family HMM TIGR01019;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=YP_856461.1;transl_table=11
NC_008570.1	RefSeq	gene	2110509	2111084	.	+	.	ID=gene1929;Dbxref=GeneID:4488645;Name=AHA_1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1931
NC_008570.1	RefSeq	CDS	2110509	2111084	.	+	0	ID=cds1878;Parent=gene1929;Dbxref=Genbank:YP_856462.1,GeneID:4488645;Name=YP_856462.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856462.1;transl_table=11
NC_008570.1	RefSeq	gene	2111264	2111719	.	+	.	ID=gene1930;Dbxref=GeneID:4488646;Name=AHA_1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1932
NC_008570.1	RefSeq	CDS	2111264	2111719	.	+	0	ID=cds1879;Parent=gene1930;Dbxref=Genbank:YP_856463.1,GeneID:4488646;Name=YP_856463.1;Note=identified by similarity to SP:Q7MIW1%3B match to protein family HMM PF05779;gbkey=CDS;product=hypothetical protein;protein_id=YP_856463.1;transl_table=11
NC_008570.1	RefSeq	gene	2111863	2113269	.	-	.	ID=gene1931;Dbxref=GeneID:4488647;Name=AHA_1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1933
NC_008570.1	RefSeq	CDS	2111863	2113269	.	-	0	ID=cds1880;Parent=gene1931;Dbxref=Genbank:YP_856464.1,GeneID:4488647;Name=YP_856464.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;product=glycine/D-amino acid oxidase;protein_id=YP_856464.1;transl_table=11
NC_008570.1	RefSeq	gene	2113288	2115036	.	-	.	ID=gene1932;Dbxref=GeneID:4488648;Name=AHA_1934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1934
NC_008570.1	RefSeq	CDS	2113288	2115036	.	-	0	ID=cds1881;Parent=gene1932;Dbxref=Genbank:YP_856465.1,GeneID:4488648;Name=YP_856465.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=YP_856465.1;transl_table=11
NC_008570.1	RefSeq	gene	2115033	2116127	.	-	.	ID=gene1933;Dbxref=GeneID:4488649;Name=AHA_1935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1935
NC_008570.1	RefSeq	CDS	2115033	2116127	.	-	0	ID=cds1882;Parent=gene1933;Dbxref=Genbank:YP_856466.1,GeneID:4488649;Name=YP_856466.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ferric cations import ATP-binding protein FbpC 2;protein_id=YP_856466.1;transl_table=11
NC_008570.1	RefSeq	gene	2116400	2117419	.	-	.	ID=gene1934;Dbxref=GeneID:4488650;Name=AHA_1936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1936
NC_008570.1	RefSeq	CDS	2116400	2117419	.	-	0	ID=cds1883;Parent=gene1934;Dbxref=Genbank:YP_856467.1,GeneID:4488650;Name=YP_856467.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_856467.1;transl_table=11
NC_008570.1	RefSeq	gene	2117540	2118484	.	-	.	ID=gene1935;Dbxref=GeneID:4488651;Name=AHA_1937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1937
NC_008570.1	RefSeq	CDS	2117540	2118484	.	-	0	ID=cds1884;Parent=gene1935;Dbxref=Genbank:YP_856468.1,GeneID:4488651;Name=YP_856468.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;product=2-aminoethylphosphonate transport%2C repressor;protein_id=YP_856468.1;transl_table=11
NC_008570.1	RefSeq	gene	2118513	2119655	.	+	.	ID=gene1936;Dbxref=GeneID:4488652;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=AHA_1938
NC_008570.1	RefSeq	CDS	2118513	2119655	.	+	0	ID=cds1885;Parent=gene1936;Dbxref=Genbank:YP_856469.1,GeneID:4488652;Name=YP_856469.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR02326;gbkey=CDS;gene=phnW;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=YP_856469.1;transl_table=11
NC_008570.1	RefSeq	gene	2119652	2121076	.	+	.	ID=gene1937;Dbxref=GeneID:4488653;Name=AHA_1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1939
NC_008570.1	RefSeq	CDS	2119652	2121076	.	+	0	ID=cds1886;Parent=gene1937;Dbxref=Genbank:YP_856470.1,GeneID:4488653;Name=YP_856470.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=YP_856470.1;transl_table=11
NC_008570.1	RefSeq	gene	2121069	2121908	.	+	.	ID=gene1938;Dbxref=GeneID:4489099;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=AHA_1940
NC_008570.1	RefSeq	CDS	2121069	2121908	.	+	0	ID=cds1887;Parent=gene1938;Dbxref=Genbank:YP_856471.1,GeneID:4489099;Name=YP_856471.1;Note=catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate;gbkey=CDS;gene=phnX;product=phosphonoacetaldehyde hydrolase;protein_id=YP_856471.1;transl_table=11
NC_008570.1	RefSeq	gene	2122032	2124353	.	-	.	ID=gene1939;Dbxref=GeneID:4489100;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AHA_1941
NC_008570.1	RefSeq	CDS	2122032	2124353	.	-	0	ID=cds1888;Parent=gene1939;Dbxref=Genbank:YP_856472.1,GeneID:4489100;Name=YP_856472.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;product=formate acetyltransferase;protein_id=YP_856472.1;transl_table=11
NC_008570.1	RefSeq	gene	2124360	2125208	.	-	.	ID=gene1940;Dbxref=GeneID:4489101;Name=AHA_1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1942
NC_008570.1	RefSeq	CDS	2124360	2125208	.	-	0	ID=cds1889;Parent=gene1940;Dbxref=Genbank:YP_856473.1,GeneID:4489101;Name=YP_856473.1;Note=identified by similarity to SP:P21501%3B match to protein family HMM PF01226%3B match to protein family HMM TIGR00790;gbkey=CDS;product=formate transporter FocA;protein_id=YP_856473.1;transl_table=11
NC_008570.1	RefSeq	gene	2125589	2127349	.	-	.	ID=gene1941;Dbxref=GeneID:4489102;Name=AHA_1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1943
NC_008570.1	RefSeq	CDS	2125589	2127349	.	-	0	ID=cds1890;Parent=gene1941;Dbxref=Genbank:YP_856474.1,GeneID:4489102;Name=YP_856474.1;Note=identified by match to protein family HMM PF02624%3B match to protein family HMM TIGR00702;gbkey=CDS;product=hypothetical protein;protein_id=YP_856474.1;transl_table=11
NC_008570.1	RefSeq	gene	2127477	2127791	.	-	.	ID=gene1942;Dbxref=GeneID:4489103;Name=AHA_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1944
NC_008570.1	RefSeq	CDS	2127477	2127791	.	-	0	ID=cds1891;Parent=gene1942;Dbxref=Genbank:YP_856475.1,GeneID:4489103;Name=YP_856475.1;Note=identified by match to protein family HMM PF00893;gbkey=CDS;product=SugE protein;protein_id=YP_856475.1;transl_table=11
NC_008570.1	RefSeq	gene	2128131	2129246	.	+	.	ID=gene1943;Dbxref=GeneID:4489104;Name=asd-1;gbkey=Gene;gene=asd-1;gene_biotype=protein_coding;locus_tag=AHA_1945
NC_008570.1	RefSeq	CDS	2128131	2129246	.	+	0	ID=cds1892;Parent=gene1943;Dbxref=Genbank:YP_856476.1,GeneID:4489104;Name=YP_856476.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;gene=asd-1;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_856476.1;transl_table=11
NC_008570.1	RefSeq	gene	2129849	2132626	.	+	.	ID=gene1944;Dbxref=GeneID:4489105;Name=AHA_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1946
NC_008570.1	RefSeq	CDS	2129849	2132626	.	+	0	ID=cds1893;Parent=gene1944;Dbxref=Genbank:YP_856477.1,GeneID:4489105;Name=YP_856477.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193;gbkey=CDS;product=M16B family peptidase;protein_id=YP_856477.1;transl_table=11
NC_008570.1	RefSeq	gene	2132723	2133886	.	-	.	ID=gene1945;Dbxref=GeneID:4489106;Name=AHA_1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1947
NC_008570.1	RefSeq	CDS	2132723	2133886	.	-	0	ID=cds1894;Parent=gene1945;Dbxref=Genbank:YP_856478.1,GeneID:4489106;Name=YP_856478.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;product=methionine gamma-lyase;protein_id=YP_856478.1;transl_table=11
NC_008570.1	RefSeq	gene	2133979	2135049	.	-	.	ID=gene1946;Dbxref=GeneID:4489107;Name=AHA_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1948
NC_008570.1	RefSeq	CDS	2133979	2135049	.	-	0	ID=cds1895;Parent=gene1946;Dbxref=Genbank:YP_856479.1,GeneID:4489107;Name=YP_856479.1;Note=identified by match to protein family HMM PF03171;gbkey=CDS;product=2OG-Fe(II) oxygenase;protein_id=YP_856479.1;transl_table=11
NC_008570.1	RefSeq	gene	2135510	2136148	.	-	.	ID=gene1947;Dbxref=GeneID:4489108;Name=AHA_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1949
NC_008570.1	RefSeq	CDS	2135510	2136148	.	-	0	ID=cds1896;Parent=gene1947;Dbxref=Genbank:YP_856480.1,GeneID:4489108;Name=YP_856480.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370;gbkey=CDS;product=hypothetical protein;protein_id=YP_856480.1;transl_table=11
NC_008570.1	RefSeq	gene	2136250	2137155	.	+	.	ID=gene1948;Dbxref=GeneID:4489109;Name=AHA_1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1950
NC_008570.1	RefSeq	CDS	2136250	2137155	.	+	0	ID=cds1897;Parent=gene1948;Dbxref=Genbank:YP_856481.1,GeneID:4489109;Name=YP_856481.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856481.1;transl_table=11
NC_008570.1	RefSeq	gene	2137281	2138021	.	-	.	ID=gene1949;Dbxref=GeneID:4489110;Name=AHA_1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1951
NC_008570.1	RefSeq	CDS	2137281	2138021	.	-	0	ID=cds1898;Parent=gene1949;Dbxref=Genbank:YP_856482.1,GeneID:4489110;Name=YP_856482.1;Note=catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA;gbkey=CDS;product=acetoacetyl-CoA reductase;protein_id=YP_856482.1;transl_table=11
NC_008570.1	RefSeq	gene	2138205	2139182	.	+	.	ID=gene1950;Dbxref=GeneID:4489111;Name=AHA_1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1952
NC_008570.1	RefSeq	CDS	2138205	2139182	.	+	0	ID=cds1899;Parent=gene1950;Dbxref=Genbank:YP_856483.1,GeneID:4489111;Name=YP_856483.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445;gbkey=CDS;product=transcriptional activator;protein_id=YP_856483.1;transl_table=11
NC_008570.1	RefSeq	gene	2139436	2141580	.	+	.	ID=gene1951;Dbxref=GeneID:4489112;Name=AHA_1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1953
NC_008570.1	RefSeq	CDS	2139436	2141580	.	+	0	ID=cds1900;Parent=gene1951;Dbxref=Genbank:YP_856484.1,GeneID:4489112;Name=YP_856484.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01783;gbkey=CDS;product=ferrichrome-iron receptor;protein_id=YP_856484.1;transl_table=11
NC_008570.1	RefSeq	gene	2141619	2142425	.	+	.	ID=gene1952;Dbxref=GeneID:4489113;Name=AHA_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1954
NC_008570.1	RefSeq	CDS	2141619	2142425	.	+	0	ID=cds1901;Parent=gene1952;Dbxref=Genbank:YP_856485.1,GeneID:4489113;Name=YP_856485.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856485.1;transl_table=11
NC_008570.1	RefSeq	gene	2142470	2143390	.	-	.	ID=gene1953;Dbxref=GeneID:4489114;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AHA_1955
NC_008570.1	RefSeq	CDS	2142470	2143390	.	-	0	ID=cds1902;Parent=gene1953;Dbxref=Genbank:YP_856486.1,GeneID:4489114;Name=YP_856486.1;Note=identified by similarity to SP:P0A9F9%3B match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;gene=metR;product=HTH-type transcriptional regulator MetR;protein_id=YP_856486.1;transl_table=11
NC_008570.1	RefSeq	gene	2143564	2145837	.	+	.	ID=gene1954;Dbxref=GeneID:4489115;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AHA_1956
NC_008570.1	RefSeq	CDS	2143564	2145837	.	+	0	ID=cds1903;Parent=gene1954;Dbxref=Genbank:YP_856487.1,GeneID:4489115;Name=YP_856487.1;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase;protein_id=YP_856487.1;transl_table=11
NC_008570.1	RefSeq	gene	2145925	2147046	.	-	.	ID=gene1955;Dbxref=GeneID:4489116;Name=AHA_1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1957
NC_008570.1	RefSeq	CDS	2145925	2147046	.	-	0	ID=cds1904;Parent=gene1955;Dbxref=Genbank:YP_856488.1,GeneID:4489116;Name=YP_856488.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;product=heptosyltransferase family protein;protein_id=YP_856488.1;transl_table=11
NC_008570.1	RefSeq	gene	2147332	2148459	.	+	.	ID=gene1956;Dbxref=GeneID:4489117;Name=AHA_1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1958
NC_008570.1	RefSeq	CDS	2147332	2148459	.	+	0	ID=cds1905;Parent=gene1956;Dbxref=Genbank:YP_856489.1,GeneID:4489117;Name=YP_856489.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF04982;gbkey=CDS;product=HPP family protein;protein_id=YP_856489.1;transl_table=11
NC_008570.1	RefSeq	gene	2148502	2150436	.	-	.	ID=gene1957;Dbxref=GeneID:4489118;Name=AHA_1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1959
NC_008570.1	RefSeq	CDS	2148502	2150436	.	-	0	ID=cds1906;Parent=gene1957;Dbxref=Genbank:YP_856490.1,GeneID:4489118;Name=YP_856490.1;Note=identified by match to protein family HMM PF07969;gbkey=CDS;product=amidohydrolase;protein_id=YP_856490.1;transl_table=11
NC_008570.1	RefSeq	gene	2150636	2151295	.	+	.	ID=gene1958;Dbxref=GeneID:4490630;Name=AHA_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1960
NC_008570.1	RefSeq	CDS	2150636	2151295	.	+	0	ID=cds1907;Parent=gene1958;Dbxref=Genbank:YP_856491.1,GeneID:4490630;Name=YP_856491.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator;protein_id=YP_856491.1;transl_table=11
NC_008570.1	RefSeq	gene	2151391	2152644	.	-	.	ID=gene1959;Dbxref=GeneID:4490631;Name=AHA_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1961
NC_008570.1	RefSeq	CDS	2151391	2152644	.	-	0	ID=cds1908;Parent=gene1959;Dbxref=Genbank:YP_856492.1,GeneID:4490631;Name=YP_856492.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;product=D-amino acid dehydrogenase small subunit;protein_id=YP_856492.1;transl_table=11
NC_008570.1	RefSeq	gene	2152796	2154316	.	-	.	ID=gene1960;Dbxref=GeneID:4490632;Name=AHA_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1962
NC_008570.1	RefSeq	CDS	2152796	2154316	.	-	0	ID=cds1909;Parent=gene1960;Dbxref=Genbank:YP_856493.1,GeneID:4490632;Name=YP_856493.1;Note=identified by match to protein family HMM PF04244;gbkey=CDS;product=cryptochrome/photolyase;protein_id=YP_856493.1;transl_table=11
NC_008570.1	RefSeq	gene	2154952	2156337	.	+	.	ID=gene1961;Dbxref=GeneID:4490633;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AHA_1963
NC_008570.1	RefSeq	CDS	2154952	2156337	.	+	0	ID=cds1910;Parent=gene1961;Dbxref=Genbank:YP_856494.1,GeneID:4490633;Name=YP_856494.1;Note=tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan;gbkey=CDS;gene=tnaA;product=tryptophanase;protein_id=YP_856494.1;transl_table=11
NC_008570.1	RefSeq	gene	2156421	2157365	.	-	.	ID=gene1962;Dbxref=GeneID:4490634;Name=AHA_1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1964
NC_008570.1	RefSeq	CDS	2156421	2157365	.	-	0	ID=cds1911;Parent=gene1962;Dbxref=Genbank:YP_856495.1,GeneID:4490634;Name=YP_856495.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_856495.1;transl_table=11
NC_008570.1	RefSeq	gene	2157522	2158277	.	+	.	ID=gene1963;Dbxref=GeneID:4490635;Name=AHA_1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1965
NC_008570.1	RefSeq	CDS	2157522	2158277	.	+	0	ID=cds1912;Parent=gene1963;Dbxref=Genbank:YP_856496.1,GeneID:4490635;Name=YP_856496.1;Note=identified by similarity to GB:AAG28384.1%3B match to protein family HMM PF01648;gbkey=CDS;product=phosphopantetheinyl transferase;protein_id=YP_856496.1;transl_table=11
NC_008570.1	RefSeq	gene	2158339	2159142	.	-	.	ID=gene1964;Dbxref=GeneID:4490636;Name=AHA_1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1966
NC_008570.1	RefSeq	CDS	2158339	2159142	.	-	0	ID=cds1913;Parent=gene1964;Dbxref=Genbank:YP_856497.1,GeneID:4490636;Name=YP_856497.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=YP_856497.1;transl_table=11
NC_008570.1	RefSeq	gene	2159186	2160331	.	-	.	ID=gene1965;Dbxref=GeneID:4490637;Name=AHA_1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1967
NC_008570.1	RefSeq	CDS	2159186	2160331	.	-	0	ID=cds1914;Parent=gene1965;Dbxref=Genbank:YP_856498.1,GeneID:4490637;Name=YP_856498.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=YP_856498.1;transl_table=11
NC_008570.1	RefSeq	gene	2160267	2161283	.	-	.	ID=gene1966;Dbxref=GeneID:4490638;Name=AHA_1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1968
NC_008570.1	RefSeq	CDS	2160267	2161283	.	-	0	ID=cds1915;Parent=gene1966;Dbxref=Genbank:YP_856499.1,GeneID:4490638;Name=YP_856499.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=YP_856499.1;transl_table=11
NC_008570.1	RefSeq	gene	2161351	2163324	.	-	.	ID=gene1967;Dbxref=GeneID:4490639;Name=AHA_1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1969
NC_008570.1	RefSeq	CDS	2161351	2163324	.	-	0	ID=cds1916;Parent=gene1967;Dbxref=Genbank:YP_856500.1,GeneID:4490639;Name=YP_856500.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=TonB-dependent siderophore receptor;protein_id=YP_856500.1;transl_table=11
NC_008570.1	RefSeq	gene	2163382	2164800	.	-	.	ID=gene1968;Dbxref=GeneID:4490640;Name=AHA_1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1970
NC_008570.1	RefSeq	CDS	2163382	2164800	.	-	0	ID=cds1917;Parent=gene1968;Dbxref=Genbank:YP_856501.1,GeneID:4490640;Name=YP_856501.1;Note=identified by similarity to GB:BAD13430.1%3B match to protein family HMM PF07690;gbkey=CDS;product=multidrug transporter;protein_id=YP_856501.1;transl_table=11
NC_008570.1	RefSeq	gene	2164862	2165614	.	+	.	ID=gene1969;Dbxref=GeneID:4490641;Name=AHA_1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1971
NC_008570.1	RefSeq	CDS	2164862	2165614	.	+	0	ID=cds1918;Parent=gene1969;Dbxref=Genbank:YP_856502.1,GeneID:4490641;Name=YP_856502.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856502.1;transl_table=11
NC_008570.1	RefSeq	gene	2165675	2166169	.	-	.	ID=gene1970;Dbxref=GeneID:4490642;Name=AHA_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1972
NC_008570.1	RefSeq	CDS	2165675	2166169	.	-	0	ID=cds1919;Parent=gene1970;Dbxref=Genbank:YP_856503.1,GeneID:4490642;Name=YP_856503.1;gbkey=CDS;product=inner membrane protein YfeZ;protein_id=YP_856503.1;transl_table=11
NC_008570.1	RefSeq	gene	2166290	2167237	.	-	.	ID=gene1971;Dbxref=GeneID:4490643;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AHA_1973
NC_008570.1	RefSeq	CDS	2166290	2167237	.	-	0	ID=cds1920;Parent=gene1971;Dbxref=Genbank:YP_856504.1,GeneID:4490643;Name=YP_856504.1;Note=identified by match to protein family HMM PF01544%3B match to protein family HMM TIGR00383;gbkey=CDS;gene=corA;product=magnesium and cobalt transport protein CorA;protein_id=YP_856504.1;transl_table=11
NC_008570.1	RefSeq	gene	2167650	2167757	.	-	.	ID=gene1972;Dbxref=GeneID:4490644;Name=AHA_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1974
NC_008570.1	RefSeq	CDS	2167650	2167757	.	-	0	ID=cds1921;Parent=gene1972;Dbxref=Genbank:YP_856505.1,GeneID:4490644;Name=YP_856505.1;gbkey=CDS;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=YP_856505.1;transl_table=11
NC_008570.1	RefSeq	gene	2167757	2169400	.	-	.	ID=gene1973;Dbxref=GeneID:4490645;Name=AHA_1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1975
NC_008570.1	RefSeq	CDS	2167757	2169400	.	-	0	ID=cds1922;Parent=gene1973;Dbxref=Genbank:YP_856506.1,GeneID:4490645;Name=YP_856506.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF05187;gbkey=CDS;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=YP_856506.1;transl_table=11
NC_008570.1	RefSeq	gene	2169516	2170274	.	+	.	ID=gene1974;Dbxref=GeneID:4490646;Name=AHA_1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1976
NC_008570.1	RefSeq	CDS	2169516	2170274	.	+	0	ID=cds1923;Parent=gene1974;Dbxref=Genbank:YP_856507.1,GeneID:4490646;Name=YP_856507.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;product=electron transfer flavoprotein subunit beta;protein_id=YP_856507.1;transl_table=11
NC_008570.1	RefSeq	gene	2170375	2171301	.	+	.	ID=gene1975;Dbxref=GeneID:4490647;Name=AHA_1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1977
NC_008570.1	RefSeq	CDS	2170375	2171301	.	+	0	ID=cds1924;Parent=gene1975;Dbxref=Genbank:YP_856508.1,GeneID:4490647;Name=YP_856508.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;product=electron transfer flavoprotein subunit alpha;protein_id=YP_856508.1;transl_table=11
NC_008570.1	RefSeq	gene	2171525	2172613	.	+	.	ID=gene1976;Dbxref=GeneID:4490648;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AHA_1978
NC_008570.1	RefSeq	CDS	2171525	2172613	.	+	0	ID=cds1925;Parent=gene1976;Dbxref=Genbank:YP_856509.1,GeneID:4490648;Name=YP_856509.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;gene=serC;product=phosphoserine aminotransferase;protein_id=YP_856509.1;transl_table=11
NC_008570.1	RefSeq	gene	2172701	2174068	.	+	.	ID=gene1977;Dbxref=GeneID:4489425;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AHA_1979
NC_008570.1	RefSeq	CDS	2172701	2174068	.	+	0	ID=cds1926;Parent=gene1977;Dbxref=Genbank:YP_856510.1,GeneID:4489425;Name=YP_856510.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_856510.1;transl_table=11
NC_008570.1	RefSeq	gene	2174282	2175337	.	+	.	ID=gene1978;Dbxref=GeneID:4489426;Name=AHA_1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1980
NC_008570.1	RefSeq	CDS	2174282	2175337	.	+	0	ID=cds1927;Parent=gene1978;Dbxref=Genbank:YP_856511.1,GeneID:4489426;Name=YP_856511.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_856511.1;transl_table=11
NC_008570.1	RefSeq	gene	2175425	2177035	.	-	.	ID=gene1979;Dbxref=GeneID:4489427;Name=AHA_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1981
NC_008570.1	RefSeq	CDS	2175425	2177035	.	-	0	ID=cds1928;Parent=gene1979;Dbxref=Genbank:YP_856512.1,GeneID:4489427;Name=YP_856512.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856512.1;transl_table=11
NC_008570.1	RefSeq	gene	2177274	2178653	.	+	.	ID=gene1980;Dbxref=GeneID:4489428;Name=AHA_1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1982
NC_008570.1	RefSeq	CDS	2177274	2178653	.	+	0	ID=cds1929;Parent=gene1980;Dbxref=Genbank:YP_856513.1,GeneID:4489428;Name=YP_856513.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_856513.1;transl_table=11
NC_008570.1	RefSeq	gene	2178725	2180089	.	-	.	ID=gene1981;Dbxref=GeneID:4489429;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AHA_1983
NC_008570.1	RefSeq	CDS	2178725	2180089	.	-	0	ID=cds1930;Parent=gene1981;Dbxref=Genbank:YP_856514.1,GeneID:4489429;Name=YP_856514.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=YP_856514.1;transl_table=11
NC_008570.1	RefSeq	gene	2180197	2181126	.	-	.	ID=gene1982;Dbxref=GeneID:4489430;Name=AHA_1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1984
NC_008570.1	RefSeq	CDS	2180197	2181126	.	-	0	ID=cds1931;Parent=gene1982;Dbxref=Genbank:YP_856515.1,GeneID:4489430;Name=YP_856515.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=transporter;protein_id=YP_856515.1;transl_table=11
NC_008570.1	RefSeq	gene	2181265	2181684	.	-	.	ID=gene1983;Dbxref=GeneID:4489431;Name=AHA_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1985
NC_008570.1	RefSeq	CDS	2181265	2181684	.	-	0	ID=cds1932;Parent=gene1983;Dbxref=Genbank:YP_856516.1,GeneID:4489431;Name=YP_856516.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;product=biopolymer transport exbD1 protein;protein_id=YP_856516.1;transl_table=11
NC_008570.1	RefSeq	gene	2181684	2182439	.	-	.	ID=gene1984;Dbxref=GeneID:4489432;Name=AHA_1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1986
NC_008570.1	RefSeq	CDS	2181684	2182439	.	-	0	ID=cds1933;Parent=gene1984;Dbxref=Genbank:YP_856517.1,GeneID:4489432;Name=YP_856517.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=MotA/TolQ/ExbB proton channel family protein;protein_id=YP_856517.1;transl_table=11
NC_008570.1	RefSeq	gene	2182442	2183245	.	-	.	ID=gene1985;Dbxref=GeneID:4489433;Name=tonB-1;gbkey=Gene;gene=tonB-1;gene_biotype=protein_coding;locus_tag=AHA_1987
NC_008570.1	RefSeq	CDS	2182442	2183245	.	-	0	ID=cds1934;Parent=gene1985;Dbxref=Genbank:YP_856518.1,GeneID:4489433;Name=YP_856518.1;Note=identified by match to protein family HMM PF03544%3B match to protein family HMM TIGR01352;gbkey=CDS;gene=tonB-1;product=outer membrane receptor-mediated transport energizer protein TonB;protein_id=YP_856518.1;transl_table=11
NC_008570.1	RefSeq	gene	2183497	2185383	.	-	.	ID=gene1986;Dbxref=GeneID:4489434;Name=AHA_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1988
NC_008570.1	RefSeq	CDS	2183497	2185383	.	-	0	ID=cds1935;Parent=gene1986;Dbxref=Genbank:YP_856519.1,GeneID:4489434;Name=YP_856519.1;Note=identified by match to protein family HMM PF02705;gbkey=CDS;product=potassium transporter;protein_id=YP_856519.1;transl_table=11
NC_008570.1	RefSeq	gene	2185831	2187294	.	+	.	ID=gene1987;Dbxref=GeneID:4489435;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AHA_1989
NC_008570.1	RefSeq	CDS	2185831	2187294	.	+	0	ID=cds1936;Parent=gene1987;Dbxref=Genbank:YP_856520.1,GeneID:4489435;Name=YP_856520.1;Note=identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302;gbkey=CDS;gene=guaB;product=inosine-5'-monophosphate dehydrogenase;protein_id=YP_856520.1;transl_table=11
NC_008570.1	RefSeq	gene	2187378	2188967	.	+	.	ID=gene1988;Dbxref=GeneID:4489436;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AHA_1990
NC_008570.1	RefSeq	CDS	2187378	2188967	.	+	0	ID=cds1937;Parent=gene1988;Dbxref=Genbank:YP_856521.1,GeneID:4489436;Name=YP_856521.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=YP_856521.1;transl_table=11
NC_008570.1	RefSeq	gene	2189196	2189618	.	+	.	ID=gene1989;Dbxref=GeneID:4489437;Name=AHA_1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1991
NC_008570.1	RefSeq	CDS	2189196	2189618	.	+	0	ID=cds1938;Parent=gene1989;Dbxref=Genbank:YP_856522.1,GeneID:4489437;Name=YP_856522.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856522.1;transl_table=11
NC_008570.1	RefSeq	gene	2190341	2191150	.	+	.	ID=gene1990;Dbxref=GeneID:4489438;Name=AHA_1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1992
NC_008570.1	RefSeq	CDS	2190341	2191150	.	+	0	ID=cds1939;Parent=gene1990;Dbxref=Genbank:YP_856523.1,GeneID:4489438;Name=YP_856523.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856523.1;transl_table=11
NC_008570.1	RefSeq	gene	2191492	2192319	.	-	.	ID=gene1991;Dbxref=GeneID:4489439;Name=AHA_1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1993
NC_008570.1	RefSeq	CDS	2191492	2192319	.	-	0	ID=cds1940;Parent=gene1991;Dbxref=Genbank:YP_856524.1,GeneID:4489439;Name=YP_856524.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;product=ada regulatory protein;protein_id=YP_856524.1;transl_table=11
NC_008570.1	RefSeq	gene	2192371	2193282	.	-	.	ID=gene1992;Dbxref=GeneID:4489440;Name=AHA_1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1994
NC_008570.1	RefSeq	CDS	2192371	2193282	.	-	0	ID=cds1941;Parent=gene1992;Dbxref=Genbank:YP_856525.1,GeneID:4489440;Name=YP_856525.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_856525.1;transl_table=11
NC_008570.1	RefSeq	gene	2193264	2194799	.	+	.	ID=gene1993;Dbxref=GeneID:4489441;Name=AHA_1995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1995
NC_008570.1	RefSeq	CDS	2193264	2194799	.	+	0	ID=cds1942;Parent=gene1993;Dbxref=Genbank:YP_856526.1,GeneID:4489441;Name=YP_856526.1;Note=identified by match to protein family HMM PF00069%3B match to protein family HMM PF00560;gbkey=CDS;product=hypothetical protein;protein_id=YP_856526.1;transl_table=11
NC_008570.1	RefSeq	gene	2195015	2195668	.	+	.	ID=gene1994;Dbxref=GeneID:4489442;Name=tpm;gbkey=Gene;gene=tpm;gene_biotype=protein_coding;locus_tag=AHA_1996
NC_008570.1	RefSeq	CDS	2195015	2195668	.	+	0	ID=cds1943;Parent=gene1994;Dbxref=Genbank:YP_856527.1,GeneID:4489442;Name=YP_856527.1;Note=identified by similarity to SP:O86262%3B match to protein family HMM PF05724;gbkey=CDS;gene=tpm;product=thiopurine S-methyltransferase;protein_id=YP_856527.1;transl_table=11
NC_008570.1	RefSeq	gene	2195977	2198751	.	-	.	ID=gene1995;Dbxref=GeneID:4489443;Name=AHA_1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1997
NC_008570.1	RefSeq	CDS	2195977	2198751	.	-	0	ID=cds1944;Parent=gene1995;Dbxref=Genbank:YP_856528.1,GeneID:4489443;Name=YP_856528.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193;gbkey=CDS;product=peptidase insulinase family protein;protein_id=YP_856528.1;transl_table=11
NC_008570.1	RefSeq	gene	2198914	2199381	.	+	.	ID=gene1996;Dbxref=GeneID:4489444;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AHA_1998
NC_008570.1	RefSeq	CDS	2198914	2199381	.	+	0	ID=cds1945;Parent=gene1996;Dbxref=Genbank:YP_856529.1,GeneID:4489444;Name=YP_856529.1;Note=identified by similarity to SP:P76502%3B match to protein family HMM PF00300%3B match to protein family HMM TIGR00249;gbkey=CDS;gene=sixA;product=phosphohistidine phosphatase SixA;protein_id=YP_856529.1;transl_table=11
NC_008570.1	RefSeq	gene	2199506	2199721	.	+	.	ID=gene1997;Dbxref=GeneID:4489232;Name=AHA_1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_1999
NC_008570.1	RefSeq	CDS	2199506	2199721	.	+	0	ID=cds1946;Parent=gene1997;Dbxref=Genbank:YP_856530.1,GeneID:4489232;Name=YP_856530.1;Note=identified by match to protein family HMM PF06526;gbkey=CDS;product=hypothetical protein;protein_id=YP_856530.1;transl_table=11
NC_008570.1	RefSeq	gene	2199922	2200839	.	+	.	ID=gene1998;Dbxref=GeneID:4489233;Name=AHA_2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2000
NC_008570.1	RefSeq	CDS	2199922	2200839	.	+	0	ID=cds1947;Parent=gene1998;Dbxref=Genbank:YP_856531.1,GeneID:4489233;Name=YP_856531.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family transporter;protein_id=YP_856531.1;transl_table=11
NC_008570.1	RefSeq	gene	2200889	2202505	.	-	.	ID=gene1999;Dbxref=GeneID:4489234;Name=AHA_2001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2001
NC_008570.1	RefSeq	CDS	2200889	2202505	.	-	0	ID=cds1948;Parent=gene1999;Dbxref=Genbank:YP_856532.1,GeneID:4489234;Name=YP_856532.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=periplasmic murein peptide-binding protein;protein_id=YP_856532.1;transl_table=11
NC_008570.1	RefSeq	gene	2202890	2203924	.	+	.	ID=gene2000;Dbxref=GeneID:4489235;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AHA_2002
NC_008570.1	RefSeq	CDS	2202890	2203924	.	+	0	ID=cds1949;Parent=gene2000;Dbxref=Genbank:YP_856533.1,GeneID:4489235;Name=YP_856533.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;gene=fbp;product=fructose-1%2C6-bisphosphatase;protein_id=YP_856533.1;transl_table=11
NC_008570.1	RefSeq	gene	2204164	2207628	.	-	.	ID=gene2001;Dbxref=GeneID:4489236;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AHA_2003
NC_008570.1	RefSeq	CDS	2204164	2207628	.	-	0	ID=cds1950;Parent=gene2001;Dbxref=Genbank:YP_856534.1,GeneID:4489236;Name=YP_856534.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=YP_856534.1;transl_table=11
NC_008570.1	RefSeq	gene	2207638	2208213	.	-	.	ID=gene2002;Dbxref=GeneID:4489237;Name=AHA_2004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2004
NC_008570.1	RefSeq	CDS	2207638	2208213	.	-	0	ID=cds1951;Parent=gene2002;Dbxref=Genbank:YP_856535.1,GeneID:4489237;Name=YP_856535.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856535.1;transl_table=11
NC_008570.1	RefSeq	gene	2208290	2209525	.	+	.	ID=gene2003;Dbxref=GeneID:4489238;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AHA_2005
NC_008570.1	RefSeq	CDS	2208290	2209525	.	+	0	ID=cds1952;Parent=gene2003;Dbxref=Genbank:YP_856536.1,GeneID:4489238;Name=YP_856536.1;Note=identified by similarity to SP:P75956%3B match to protein family HMM PF02687%3B match to protein family HMM TIGR02212;gbkey=CDS;gene=lolC;product=lipoprotein-releasing system transmembrane protein LolC;protein_id=YP_856536.1;transl_table=11
NC_008570.1	RefSeq	gene	2209518	2210300	.	+	.	ID=gene2004;Dbxref=GeneID:4489239;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AHA_2006
NC_008570.1	RefSeq	CDS	2209518	2210300	.	+	0	ID=cds1953;Parent=gene2004;Dbxref=Genbank:YP_856537.1,GeneID:4489239;Name=YP_856537.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02211;gbkey=CDS;gene=lolD;product=lipoprotein releasing system%2C ATP-binding protein;protein_id=YP_856537.1;transl_table=11
NC_008570.1	RefSeq	gene	2210300	2211541	.	+	.	ID=gene2005;Dbxref=GeneID:4489240;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AHA_2007
NC_008570.1	RefSeq	CDS	2210300	2211541	.	+	0	ID=cds1954;Parent=gene2005;Dbxref=Genbank:YP_856538.1,GeneID:4489240;Name=YP_856538.1;Note=identified by similarity to SP:P75958%3B match to protein family HMM PF02687%3B match to protein family HMM TIGR02212;gbkey=CDS;gene=lolE;product=lipoprotein releasing system%2C transmembrane protein LolE;protein_id=YP_856538.1;transl_table=11
NC_008570.1	RefSeq	gene	2211626	2212216	.	-	.	ID=gene2006;Dbxref=GeneID:4489241;Name=AHA_2008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2008
NC_008570.1	RefSeq	CDS	2211626	2212216	.	-	0	ID=cds1955;Parent=gene2006;Dbxref=Genbank:YP_856539.1,GeneID:4489241;Name=YP_856539.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=5'-nucleotidase;protein_id=YP_856539.1;transl_table=11
NC_008570.1	RefSeq	gene	2212290	2212724	.	-	.	ID=gene2007;Dbxref=GeneID:4489242;Name=AHA_2009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2009
NC_008570.1	RefSeq	CDS	2212290	2212724	.	-	0	ID=cds1956;Parent=gene2007;Dbxref=Genbank:YP_856540.1,GeneID:4489242;Name=YP_856540.1;Note=identified by match to protein family HMM PF03733;gbkey=CDS;product=hypothetical protein;protein_id=YP_856540.1;transl_table=11
NC_008570.1	RefSeq	gene	2213153	2214463	.	+	.	ID=gene2008;Dbxref=GeneID:4489243;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AHA_2010
NC_008570.1	RefSeq	CDS	2213153	2214463	.	+	0	ID=cds1957;Parent=gene2008;Dbxref=Genbank:YP_856541.1,GeneID:4489243;Name=YP_856541.1;Note=Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;gbkey=CDS;gene=tig;product=trigger factor;protein_id=YP_856541.1;transl_table=11
NC_008570.1	RefSeq	gene	2214571	2215173	.	+	.	ID=gene2009;Dbxref=GeneID:4489244;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AHA_2011
NC_008570.1	RefSeq	CDS	2214571	2215173	.	+	0	ID=cds1958;Parent=gene2009;Dbxref=Genbank:YP_856542.1,GeneID:4489244;Name=YP_856542.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_856542.1;transl_table=11
NC_008570.1	RefSeq	gene	2215320	2216594	.	+	.	ID=gene2010;Dbxref=GeneID:4489245;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AHA_2012
NC_008570.1	RefSeq	CDS	2215320	2216594	.	+	0	ID=cds1959;Parent=gene2010;Dbxref=Genbank:YP_856543.1,GeneID:4489245;Name=YP_856543.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_856543.1;transl_table=11
NC_008570.1	RefSeq	gene	2216736	2219090	.	+	.	ID=gene2011;Dbxref=GeneID:4489246;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AHA_2013
NC_008570.1	RefSeq	CDS	2216736	2219090	.	+	0	ID=cds1960;Parent=gene2011;Dbxref=Genbank:YP_856544.1,GeneID:4489246;Name=YP_856544.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon;product=ATP-dependent protease La;protein_id=YP_856544.1;transl_table=11
NC_008570.1	RefSeq	gene	2219331	2219603	.	+	.	ID=gene2012;Dbxref=GeneID:4489247;Name=AHA_2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2014
NC_008570.1	RefSeq	CDS	2219331	2219603	.	+	0	ID=cds1961;Parent=gene2012;Dbxref=Genbank:YP_856545.1,GeneID:4489247;Name=YP_856545.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;product=DNA-binding protein HU-beta;protein_id=YP_856545.1;transl_table=11
NC_008570.1	RefSeq	gene	2219758	2221668	.	+	.	ID=gene2013;Dbxref=GeneID:4489248;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AHA_2015
NC_008570.1	RefSeq	CDS	2219758	2221668	.	+	0	ID=cds1962;Parent=gene2013;Dbxref=Genbank:YP_856546.1,GeneID:4489248;Name=YP_856546.1;Note=identified by similarity to SP:P77241%3B match to protein family HMM PF00639;gbkey=CDS;gene=ppiD;product=peptidylprolyl cis-trans isomerase D;protein_id=YP_856546.1;transl_table=11
NC_008570.1	RefSeq	gene	2221894	2223486	.	-	.	ID=gene2014;Dbxref=GeneID:4489249;Name=AHA_2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2016
NC_008570.1	RefSeq	CDS	2221894	2223486	.	-	0	ID=cds1963;Parent=gene2014;Dbxref=Genbank:YP_856547.1,GeneID:4489249;Name=YP_856547.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_856547.1;transl_table=11
NC_008570.1	RefSeq	gene	2223672	2224802	.	-	.	ID=gene2015;Dbxref=GeneID:4489250;Name=AHA_2017;Note=phage integrase family protein%2C authentic point mutation%3B this gene contains a premature stop which is not the result of sequencing error%3B identified by match to protein family HMM PF00589;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AHA_2017;pseudo=true
NC_008570.1	RefSeq	gene	2224945	2225355	.	-	.	ID=gene2016;Dbxref=GeneID:4487595;Name=AHA_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2018
NC_008570.1	RefSeq	CDS	2224945	2225355	.	-	0	ID=cds1964;Parent=gene2016;Dbxref=Genbank:YP_856548.1,GeneID:4487595;Name=YP_856548.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856548.1;transl_table=11
NC_008570.1	RefSeq	gene	2225454	2225855	.	-	.	ID=gene2017;Dbxref=GeneID:4487596;Name=AHA_2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2019
NC_008570.1	RefSeq	CDS	2225454	2225855	.	-	0	ID=cds1965;Parent=gene2017;Dbxref=Genbank:YP_856549.1,GeneID:4487596;Name=YP_856549.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856549.1;transl_table=11
NC_008570.1	RefSeq	gene	2226502	2227989	.	-	.	ID=gene2018;Dbxref=GeneID:4487597;Name=AHA_2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2020
NC_008570.1	RefSeq	CDS	2226502	2227989	.	-	0	ID=cds1966;Parent=gene2018;Dbxref=Genbank:YP_856550.1,GeneID:4487597;Name=YP_856550.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856550.1;transl_table=11
NC_008570.1	RefSeq	gene	2228171	2228362	.	-	.	ID=gene2019;Dbxref=GeneID:4487598;Name=AHA_2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2021
NC_008570.1	RefSeq	CDS	2228171	2228362	.	-	0	ID=cds1967;Parent=gene2019;Dbxref=Genbank:YP_856551.1,GeneID:4487598;Name=YP_856551.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856551.1;transl_table=11
NC_008570.1	RefSeq	gene	2229144	2229428	.	-	.	ID=gene2020;Dbxref=GeneID:4487599;Name=AHA_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2022
NC_008570.1	RefSeq	CDS	2229144	2229428	.	-	0	ID=cds1968;Parent=gene2020;Dbxref=Genbank:YP_856552.1,GeneID:4487599;Name=YP_856552.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=YP_856552.1;transl_table=11
NC_008570.1	RefSeq	gene	2229994	2231145	.	-	.	ID=gene2021;Dbxref=GeneID:4487600;Name=AHA_2023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2023
NC_008570.1	RefSeq	CDS	2229994	2231145	.	-	0	ID=cds1969;Parent=gene2021;Dbxref=Genbank:YP_856553.1,GeneID:4487600;Name=YP_856553.1;Note=identified by match to protein family HMM PF06114;gbkey=CDS;product=hypothetical protein;protein_id=YP_856553.1;transl_table=11
NC_008570.1	RefSeq	gene	2232078	2232257	.	-	.	ID=gene2022;Dbxref=GeneID:4487601;Name=AHA_2024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2024
NC_008570.1	RefSeq	CDS	2232078	2232257	.	-	0	ID=cds1970;Parent=gene2022;Dbxref=Genbank:YP_856554.1,GeneID:4487601;Name=YP_856554.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856554.1;transl_table=11
NC_008570.1	RefSeq	gene	2232485	2233090	.	-	.	ID=gene2023;Dbxref=GeneID:4487602;Name=AHA_2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2025
NC_008570.1	RefSeq	CDS	2232485	2233090	.	-	0	ID=cds1971;Parent=gene2023;Dbxref=Genbank:YP_856555.1,GeneID:4487602;Name=YP_856555.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=YP_856555.1;transl_table=11
NC_008570.1	RefSeq	gene	2233478	2233867	.	+	.	ID=gene2024;Dbxref=GeneID:4487603;Name=AHA_2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2026
NC_008570.1	RefSeq	CDS	2233478	2233867	.	+	0	ID=cds1972;Parent=gene2024;Dbxref=Genbank:YP_856556.1,GeneID:4487603;Name=YP_856556.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856556.1;transl_table=11
NC_008570.1	RefSeq	gene	2234529	2235266	.	+	.	ID=gene2025;Dbxref=GeneID:4487604;Name=AHA_2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2027
NC_008570.1	RefSeq	CDS	2234529	2235266	.	+	0	ID=cds1973;Parent=gene2025;Dbxref=Genbank:YP_856557.1,GeneID:4487604;Name=YP_856557.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856557.1;transl_table=11
NC_008570.1	RefSeq	gene	2235244	2235726	.	+	.	ID=gene2026;Dbxref=GeneID:4487605;Name=AHA_2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2028
NC_008570.1	RefSeq	CDS	2235244	2235726	.	+	0	ID=cds1974;Parent=gene2026;Dbxref=Genbank:YP_856558.1,GeneID:4487605;Name=YP_856558.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856558.1;transl_table=11
NC_008570.1	RefSeq	gene	2236299	2236766	.	-	.	ID=gene2027;Dbxref=GeneID:4487606;Name=AHA_2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2029
NC_008570.1	RefSeq	CDS	2236299	2236766	.	-	0	ID=cds1975;Parent=gene2027;Dbxref=Genbank:YP_856559.1,GeneID:4487606;Name=YP_856559.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856559.1;transl_table=11
NC_008570.1	RefSeq	gene	2237161	2237826	.	-	.	ID=gene2028;Dbxref=GeneID:4487607;Name=AHA_2030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2030
NC_008570.1	RefSeq	CDS	2237161	2237826	.	-	0	ID=cds1976;Parent=gene2028;Dbxref=Genbank:YP_856560.1,GeneID:4487607;Name=YP_856560.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856560.1;transl_table=11
NC_008570.1	RefSeq	gene	2237965	2238360	.	-	.	ID=gene2029;Dbxref=GeneID:4487608;Name=AHA_2031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2031
NC_008570.1	RefSeq	CDS	2237965	2238360	.	-	0	ID=cds1977;Parent=gene2029;Dbxref=Genbank:YP_856561.1,GeneID:4487608;Name=YP_856561.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856561.1;transl_table=11
NC_008570.1	RefSeq	gene	2238820	2239605	.	+	.	ID=gene2030;Dbxref=GeneID:4487609;Name=AHA_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2032
NC_008570.1	RefSeq	CDS	2238820	2239605	.	+	0	ID=cds1978;Parent=gene2030;Dbxref=Genbank:YP_856562.1,GeneID:4487609;Name=YP_856562.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856562.1;transl_table=11
NC_008570.1	RefSeq	gene	2239584	2240438	.	+	.	ID=gene2031;Dbxref=GeneID:4487610;Name=AHA_2033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2033
NC_008570.1	RefSeq	CDS	2239584	2240438	.	+	0	ID=cds1979;Parent=gene2031;Dbxref=Genbank:YP_856563.1,GeneID:4487610;Name=YP_856563.1;Note=identified by similarity to GB:AAV82456.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856563.1;transl_table=11
NC_008570.1	RefSeq	gene	2241671	2241805	.	-	.	ID=gene2032;Dbxref=GeneID:4487611;Name=AHA_2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2034
NC_008570.1	RefSeq	CDS	2241671	2241805	.	-	0	ID=cds1980;Parent=gene2032;Dbxref=Genbank:YP_856564.1,GeneID:4487611;Name=YP_856564.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856564.1;transl_table=11
NC_008570.1	RefSeq	gene	2242283	2243191	.	+	.	ID=gene2033;Dbxref=GeneID:4487612;Name=AHA_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2035
NC_008570.1	RefSeq	CDS	2242283	2243191	.	+	0	ID=cds1981;Parent=gene2033;Dbxref=Genbank:YP_856565.1,GeneID:4487612;Name=YP_856565.1;Note=identified by match to protein family HMM PF00078;gbkey=CDS;product=RNA-dependent DNA polymerase;protein_id=YP_856565.1;transl_table=11
NC_008570.1	RefSeq	gene	2243181	2244851	.	+	.	ID=gene2034;Dbxref=GeneID:4487613;Name=AHA_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2036
NC_008570.1	RefSeq	CDS	2243181	2244851	.	+	0	ID=cds1982;Parent=gene2034;Dbxref=Genbank:YP_856566.1,GeneID:4487613;Name=YP_856566.1;Note=identified by match to protein family HMM PF02463;gbkey=CDS;product=RecF/RecN/SMC family protein;protein_id=YP_856566.1;transl_table=11
NC_008570.1	RefSeq	gene	2244835	2245503	.	+	.	ID=gene2035;Dbxref=GeneID:4487614;Name=AHA_2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2037
NC_008570.1	RefSeq	CDS	2244835	2245503	.	+	0	ID=cds1983;Parent=gene2035;Dbxref=Genbank:YP_856567.1,GeneID:4487614;Name=YP_856567.1;Note=identified by match to protein family HMM TIGR02646;gbkey=CDS;product=hypothetical protein;protein_id=YP_856567.1;transl_table=11
NC_008570.1	RefSeq	gene	2245549	2246283	.	+	.	ID=gene2036;Dbxref=GeneID:4489600;Name=AHA_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2038
NC_008570.1	RefSeq	CDS	2245549	2246283	.	+	0	ID=cds1984;Parent=gene2036;Dbxref=Genbank:YP_856568.1,GeneID:4489600;Name=YP_856568.1;Note=identified by match to protein family HMM TIGR02681;gbkey=CDS;product=Rha family phage regulatory protein;protein_id=YP_856568.1;transl_table=11
NC_008570.1	RefSeq	gene	2246290	2246730	.	+	.	ID=gene2037;Dbxref=GeneID:4489601;Name=AHA_2039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2039
NC_008570.1	RefSeq	CDS	2246290	2246730	.	+	0	ID=cds1985;Parent=gene2037;Dbxref=Genbank:YP_856569.1,GeneID:4489601;Name=YP_856569.1;Note=identified by match to protein family HMM PF05772;gbkey=CDS;product=NinB protein;protein_id=YP_856569.1;transl_table=11
NC_008570.1	RefSeq	gene	2246727	2247044	.	+	.	ID=gene2038;Dbxref=GeneID:4489602;Name=AHA_2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2040
NC_008570.1	RefSeq	CDS	2246727	2247044	.	+	0	ID=cds1986;Parent=gene2038;Dbxref=Genbank:YP_856570.1,GeneID:4489602;Name=YP_856570.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856570.1;transl_table=11
NC_008570.1	RefSeq	gene	2247041	2247463	.	+	.	ID=gene2039;Dbxref=GeneID:4489603;Name=AHA_2041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2041
NC_008570.1	RefSeq	CDS	2247041	2247463	.	+	0	ID=cds1987;Parent=gene2039;Dbxref=Genbank:YP_856571.1,GeneID:4489603;Name=YP_856571.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856571.1;transl_table=11
NC_008570.1	RefSeq	gene	2247460	2248161	.	+	.	ID=gene2040;Dbxref=GeneID:4489604;Name=AHA_2042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2042
NC_008570.1	RefSeq	CDS	2247460	2248161	.	+	0	ID=cds1988;Parent=gene2040;Dbxref=Genbank:YP_856572.1,GeneID:4489604;Name=YP_856572.1;Note=identified by match to protein family HMM TIGR02642;gbkey=CDS;product=hypothetical protein;protein_id=YP_856572.1;transl_table=11
NC_008570.1	RefSeq	gene	2248208	2248891	.	-	.	ID=gene2041;Dbxref=GeneID:4489605;Name=AHA_2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2043
NC_008570.1	RefSeq	CDS	2248208	2248891	.	-	0	ID=cds1989;Parent=gene2041;Dbxref=Genbank:YP_856573.1,GeneID:4489605;Name=YP_856573.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856573.1;transl_table=11
NC_008570.1	RefSeq	gene	2248997	2250271	.	-	.	ID=gene2042;Dbxref=GeneID:4489606;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AHA_2044
NC_008570.1	RefSeq	CDS	2248997	2250271	.	-	0	ID=cds1990;Parent=gene2042;Dbxref=Genbank:YP_856574.1,GeneID:4489606;Name=YP_856574.1;Note=identified by similarity to SP:P04152%3B match to protein family HMM PF00817;gbkey=CDS;gene=umuC;product=protein UmuC;protein_id=YP_856574.1;transl_table=11
NC_008570.1	RefSeq	gene	2250275	2250697	.	-	.	ID=gene2043;Dbxref=GeneID:4489607;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AHA_2045
NC_008570.1	RefSeq	CDS	2250275	2250697	.	-	0	ID=cds1991;Parent=gene2043;Dbxref=Genbank:YP_856575.1,GeneID:4489607;Name=YP_856575.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;gene=umuD;product=umuD protein;protein_id=YP_856575.1;transl_table=11
NC_008570.1	RefSeq	gene	2250885	2251949	.	+	.	ID=gene2044;Dbxref=GeneID:4489608;Name=AHA_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2046
NC_008570.1	RefSeq	CDS	2250885	2251949	.	+	0	ID=cds1992;Parent=gene2044;Dbxref=Genbank:YP_856576.1,GeneID:4489608;Name=YP_856576.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856576.1;transl_table=11
NC_008570.1	RefSeq	gene	2252032	2252442	.	+	.	ID=gene2045;Dbxref=GeneID:4489609;Name=AHA_2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2047
NC_008570.1	RefSeq	CDS	2252032	2252442	.	+	0	ID=cds1993;Parent=gene2045;Dbxref=Genbank:YP_856577.1,GeneID:4489609;Name=YP_856577.1;Note=identified by match to protein family HMM PF00816;gbkey=CDS;product=DNA-binding protein Hns;protein_id=YP_856577.1;transl_table=11
NC_008570.1	RefSeq	gene	2252526	2252999	.	+	.	ID=gene2046;Dbxref=GeneID:4489610;Name=AHA_2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2048
NC_008570.1	RefSeq	CDS	2252526	2252999	.	+	0	ID=cds1994;Parent=gene2046;Dbxref=Genbank:YP_856578.1,GeneID:4489610;Name=YP_856578.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856578.1;transl_table=11
NC_008570.1	RefSeq	gene	2253020	2253631	.	+	.	ID=gene2047;Dbxref=GeneID:4489611;Name=AHA_2049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2049
NC_008570.1	RefSeq	CDS	2253020	2253631	.	+	0	ID=cds1995;Parent=gene2047;Dbxref=Genbank:YP_856579.1,GeneID:4489611;Name=YP_856579.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856579.1;transl_table=11
NC_008570.1	RefSeq	gene	2253952	2254443	.	+	.	ID=gene2048;Dbxref=GeneID:4489612;Name=AHA_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2050
NC_008570.1	RefSeq	CDS	2253952	2254443	.	+	0	ID=cds1996;Parent=gene2048;Dbxref=Genbank:YP_856580.1,GeneID:4489612;Name=YP_856580.1;Note=identified by match to protein family HMM PF00959;gbkey=CDS;product=phage lysozyme;protein_id=YP_856580.1;transl_table=11
NC_008570.1	RefSeq	gene	2254269	2254940	.	+	.	ID=gene2049;Dbxref=GeneID:4489613;Name=AHA_2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2052
NC_008570.1	RefSeq	CDS	2254269	2254940	.	+	0	ID=cds1997;Parent=gene2049;Dbxref=Genbank:YP_856581.1,GeneID:4489613;Name=YP_856581.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856581.1;transl_table=11
NC_008570.1	RefSeq	gene	2254488	2254838	.	-	.	ID=gene2050;Dbxref=GeneID:4489614;Name=AHA_2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2051
NC_008570.1	RefSeq	CDS	2254488	2254838	.	-	0	ID=cds1998;Parent=gene2050;Dbxref=Genbank:YP_856582.1,GeneID:4489614;Name=YP_856582.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856582.1;transl_table=11
NC_008570.1	RefSeq	gene	2255023	2255919	.	+	.	ID=gene2051;Dbxref=GeneID:4489615;Name=AHA_2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2053
NC_008570.1	RefSeq	CDS	2255023	2255919	.	+	0	ID=cds1999;Parent=gene2051;Dbxref=Genbank:YP_856583.1,GeneID:4489615;Name=YP_856583.1;gbkey=CDS;product=small subunit bacteriophage terminase;protein_id=YP_856583.1;transl_table=11
NC_008570.1	RefSeq	gene	2255959	2256705	.	+	.	ID=gene2052;Dbxref=GeneID:4489616;Name=AHA_2054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2054
NC_008570.1	RefSeq	CDS	2255959	2256705	.	+	0	ID=cds2000;Parent=gene2052;Dbxref=Genbank:YP_856584.1,GeneID:4489616;Name=YP_856584.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856584.1;transl_table=11
NC_008570.1	RefSeq	gene	2256773	2257837	.	+	.	ID=gene2053;Dbxref=GeneID:4489617;Name=AHA_2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2055
NC_008570.1	RefSeq	CDS	2256773	2257837	.	+	0	ID=cds2001;Parent=gene2053;Dbxref=Genbank:YP_856585.1,GeneID:4489617;Name=YP_856585.1;gbkey=CDS;product=large subunit terminase;protein_id=YP_856585.1;transl_table=11
NC_008570.1	RefSeq	gene	2260336	2261991	.	-	.	ID=gene2054;Dbxref=GeneID:4489618;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AHA_2056
NC_008570.1	RefSeq	CDS	2260336	2261991	.	-	0	ID=cds2002;Parent=gene2054;Dbxref=Genbank:YP_856586.1,GeneID:4489618;Name=YP_856586.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=acetate permease;protein_id=YP_856586.1;transl_table=11
NC_008570.1	RefSeq	gene	2261988	2262299	.	-	.	ID=gene2055;Dbxref=GeneID:4488578;Name=AHA_2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2057
NC_008570.1	RefSeq	CDS	2261988	2262299	.	-	0	ID=cds2003;Parent=gene2055;Dbxref=Genbank:YP_856587.1,GeneID:4488578;Name=YP_856587.1;Note=identified by match to protein family HMM PF04341;gbkey=CDS;product=hypothetical protein;protein_id=YP_856587.1;transl_table=11
NC_008570.1	RefSeq	gene	2262409	2263035	.	-	.	ID=gene2056;Dbxref=GeneID:4488579;Name=AHA_2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2058
NC_008570.1	RefSeq	CDS	2262409	2263035	.	-	0	ID=cds2004;Parent=gene2056;Dbxref=Genbank:YP_856588.1,GeneID:4488579;Name=YP_856588.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=YP_856588.1;transl_table=11
NC_008570.1	RefSeq	gene	2263038	2264825	.	-	.	ID=gene2057;Dbxref=GeneID:4488580;Name=AHA_2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2059
NC_008570.1	RefSeq	CDS	2263038	2264825	.	-	0	ID=cds2005;Parent=gene2057;Dbxref=Genbank:YP_856589.1,GeneID:4488580;Name=YP_856589.1;Note=identified by match to protein family HMM PF00027%3B match to protein family HMM PF00571%3B match to protein family HMM PF03445;gbkey=CDS;product=cyclic nucleotide binding protein/CBS domain-containing proteins;protein_id=YP_856589.1;transl_table=11
NC_008570.1	RefSeq	gene	2265002	2265808	.	+	.	ID=gene2058;Dbxref=GeneID:4488581;Name=AHA_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2060
NC_008570.1	RefSeq	CDS	2265002	2265808	.	+	0	ID=cds2006;Parent=gene2058;Dbxref=Genbank:YP_856590.1,GeneID:4488581;Name=YP_856590.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;product=enoyl-CoA hydratase/isomerase family protein;protein_id=YP_856590.1;transl_table=11
NC_008570.1	RefSeq	gene	2266221	2266472	.	+	.	ID=gene2059;Dbxref=GeneID:4488582;Name=AHA_2061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2061
NC_008570.1	RefSeq	CDS	2266221	2266472	.	+	0	ID=cds2007;Parent=gene2059;Dbxref=Genbank:YP_856591.1,GeneID:4488582;Name=YP_856591.1;Note=identified by match to protein family HMM PF04606;gbkey=CDS;product=phage transcriptional activator%2C Ogr/Delta;protein_id=YP_856591.1;transl_table=11
NC_008570.1	RefSeq	gene	2266720	2267709	.	-	.	ID=gene2060;Dbxref=GeneID:4488583;Name=AHA_2062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2062
NC_008570.1	RefSeq	CDS	2266720	2267709	.	-	0	ID=cds2008;Parent=gene2060;Dbxref=Genbank:YP_856592.1,GeneID:4488583;Name=YP_856592.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856592.1;transl_table=11
NC_008570.1	RefSeq	gene	2267696	2270161	.	-	.	ID=gene2061;Dbxref=GeneID:4488584;Name=AHA_2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2063
NC_008570.1	RefSeq	CDS	2267696	2270161	.	-	0	ID=cds2009;Parent=gene2061;Dbxref=Genbank:YP_856593.1,GeneID:4488584;Name=YP_856593.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856593.1;transl_table=11
NC_008570.1	RefSeq	gene	2270253	2270723	.	-	.	ID=gene2062;Dbxref=GeneID:4488585;Name=AHA_2064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2064
NC_008570.1	RefSeq	CDS	2270253	2270723	.	-	0	ID=cds2010;Parent=gene2062;Dbxref=Genbank:YP_856594.1,GeneID:4488585;Name=YP_856594.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856594.1;transl_table=11
NC_008570.1	RefSeq	gene	2270973	2271560	.	-	.	ID=gene2063;Dbxref=GeneID:4488586;Name=AHA_2065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2065
NC_008570.1	RefSeq	CDS	2270973	2271560	.	-	0	ID=cds2011;Parent=gene2063;Dbxref=Genbank:YP_856595.1,GeneID:4488586;Name=YP_856595.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856595.1;transl_table=11
NC_008570.1	RefSeq	gene	2271560	2271940	.	-	.	ID=gene2064;Dbxref=GeneID:4488587;Name=AHA_2066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2066
NC_008570.1	RefSeq	CDS	2271560	2271940	.	-	0	ID=cds2012;Parent=gene2064;Dbxref=Genbank:YP_856596.1,GeneID:4488587;Name=YP_856596.1;Note=identified by match to protein family HMM PF05840;gbkey=CDS;product=hypothetical protein;protein_id=YP_856596.1;transl_table=11
NC_008570.1	RefSeq	gene	2272025	2273524	.	-	.	ID=gene2065;Dbxref=GeneID:4488588;Name=AHA_2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2067
NC_008570.1	RefSeq	CDS	2272025	2273524	.	-	0	ID=cds2013;Parent=gene2065;Dbxref=Genbank:YP_856597.1,GeneID:4488588;Name=YP_856597.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;product=sodium:alanine symporter family protein;protein_id=YP_856597.1;transl_table=11
NC_008570.1	RefSeq	gene	2273674	2274276	.	+	.	ID=gene2066;Dbxref=GeneID:4488589;Name=AHA_2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2068
NC_008570.1	RefSeq	CDS	2273674	2274276	.	+	0	ID=cds2014;Parent=gene2066;Dbxref=Genbank:YP_856598.1,GeneID:4488589;Name=YP_856598.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=protein PhnO;protein_id=YP_856598.1;transl_table=11
NC_008570.1	RefSeq	gene	2274295	2275104	.	+	.	ID=gene2067;Dbxref=GeneID:4488590;Name=AHA_2069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2069
NC_008570.1	RefSeq	CDS	2274295	2275104	.	+	0	ID=cds2015;Parent=gene2067;Dbxref=Genbank:YP_856599.1,GeneID:4488590;Name=YP_856599.1;Note=identified by match to protein family HMM PF06167;gbkey=CDS;product=hypothetical protein;protein_id=YP_856599.1;transl_table=11
NC_008570.1	RefSeq	gene	2275187	2275783	.	-	.	ID=gene2068;Dbxref=GeneID:4488591;Name=AHA_2070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2070
NC_008570.1	RefSeq	CDS	2275187	2275783	.	-	0	ID=cds2016;Parent=gene2068;Dbxref=Genbank:YP_856600.1,GeneID:4488591;Name=YP_856600.1;Note=identified by match to protein family HMM PF01184;gbkey=CDS;product=GPR1/FUN34/yaaH family membrane protein;protein_id=YP_856600.1;transl_table=11
NC_008570.1	RefSeq	gene	2276469	2279369	.	-	.	ID=gene2069;Dbxref=GeneID:4488592;Name=AHA_2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2071
NC_008570.1	RefSeq	CDS	2276469	2279369	.	-	0	ID=cds2017;Parent=gene2069;Dbxref=Genbank:YP_856601.1,GeneID:4488592;Name=YP_856601.1;Note=identified by match to protein family HMM PF05359;gbkey=CDS;product=hypothetical protein;protein_id=YP_856601.1;transl_table=11
NC_008570.1	RefSeq	gene	2279418	2280179	.	-	.	ID=gene2070;Dbxref=GeneID:4488593;Name=AHA_2072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2072
NC_008570.1	RefSeq	CDS	2279418	2280179	.	-	0	ID=cds2018;Parent=gene2070;Dbxref=Genbank:YP_856602.1,GeneID:4488593;Name=YP_856602.1;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_856602.1;transl_table=11
NC_008570.1	RefSeq	gene	2280217	2280639	.	-	.	ID=gene2071;Dbxref=GeneID:4488594;Name=AHA_2073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2073
NC_008570.1	RefSeq	CDS	2280217	2280639	.	-	0	ID=cds2019;Parent=gene2071;Dbxref=Genbank:YP_856603.1,GeneID:4488594;Name=YP_856603.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=YP_856603.1;transl_table=11
NC_008570.1	RefSeq	gene	2280651	2281607	.	-	.	ID=gene2072;Dbxref=GeneID:4488595;Name=AHA_2074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2074
NC_008570.1	RefSeq	CDS	2280651	2281607	.	-	0	ID=cds2020;Parent=gene2072;Dbxref=Genbank:YP_856604.1,GeneID:4488595;Name=YP_856604.1;Note=identified by match to protein family HMM PF00682;gbkey=CDS;product=hydroxymethylglutaryl-CoA lyase;protein_id=YP_856604.1;transl_table=11
NC_008570.1	RefSeq	gene	2281604	2283568	.	-	.	ID=gene2073;Dbxref=GeneID:4490916;Name=AHA_2075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2075
NC_008570.1	RefSeq	CDS	2281604	2283568	.	-	0	ID=cds2021;Parent=gene2073;Dbxref=Genbank:YP_856605.1,GeneID:4490916;Name=YP_856605.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF01071%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786;gbkey=CDS;product=methylcrotonoyl-CoA carboxylase subunit alpha;protein_id=YP_856605.1;transl_table=11
NC_008570.1	RefSeq	gene	2283678	2284517	.	-	.	ID=gene2074;Dbxref=GeneID:4490917;Name=AHA_2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2076
NC_008570.1	RefSeq	CDS	2283678	2284517	.	-	0	ID=cds2022;Parent=gene2074;Dbxref=Genbank:YP_856606.1,GeneID:4490917;Name=YP_856606.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;product=enoyl-CoA hydratase/isomerase family protein;protein_id=YP_856606.1;transl_table=11
NC_008570.1	RefSeq	gene	2284527	2286128	.	-	.	ID=gene2075;Dbxref=GeneID:4490918;Name=AHA_2077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2077
NC_008570.1	RefSeq	CDS	2284527	2286128	.	-	0	ID=cds2023;Parent=gene2075;Dbxref=Genbank:YP_856607.1,GeneID:4490918;Name=YP_856607.1;Note=identified by match to protein family HMM PF01039;gbkey=CDS;product=methylcrotonoyl-CoA carboxylase subunit beta;protein_id=YP_856607.1;transl_table=11
NC_008570.1	RefSeq	gene	2286125	2287273	.	-	.	ID=gene2076;Dbxref=GeneID:4490919;Name=AHA_2078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2078
NC_008570.1	RefSeq	CDS	2286125	2287273	.	-	0	ID=cds2024;Parent=gene2076;Dbxref=Genbank:YP_856608.1,GeneID:4490919;Name=YP_856608.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;product=isovaleryl-CoA dehydrogenase 2;protein_id=YP_856608.1;transl_table=11
NC_008570.1	RefSeq	gene	2287520	2289031	.	+	.	ID=gene2077;Dbxref=GeneID:4490920;Name=mmsA-2;gbkey=Gene;gene=mmsA-2;gene_biotype=protein_coding;locus_tag=AHA_2079
NC_008570.1	RefSeq	CDS	2287520	2289031	.	+	0	ID=cds2025;Parent=gene2077;Dbxref=Genbank:YP_856609.1,GeneID:4490920;Name=YP_856609.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01722;gbkey=CDS;gene=mmsA-2;product=methylmalonate-semialdehyde dehydrogenase;protein_id=YP_856609.1;transl_table=11
NC_008570.1	RefSeq	gene	2289031	2290254	.	+	.	ID=gene2078;Dbxref=GeneID:4490921;Name=AHA_2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2080
NC_008570.1	RefSeq	CDS	2289031	2290254	.	+	0	ID=cds2026;Parent=gene2078;Dbxref=Genbank:YP_856610.1,GeneID:4490921;Name=YP_856610.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_856610.1;transl_table=11
NC_008570.1	RefSeq	gene	2290395	2291207	.	+	.	ID=gene2079;Dbxref=GeneID:4490922;Name=AHA_2081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2081
NC_008570.1	RefSeq	CDS	2290395	2291207	.	+	0	ID=cds2027;Parent=gene2079;Dbxref=Genbank:YP_856611.1,GeneID:4490922;Name=YP_856611.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=YP_856611.1;transl_table=11
NC_008570.1	RefSeq	gene	2291267	2292370	.	+	.	ID=gene2080;Dbxref=GeneID:4490923;Name=AHA_2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2082
NC_008570.1	RefSeq	CDS	2291267	2292370	.	+	0	ID=cds2028;Parent=gene2080;Dbxref=Genbank:YP_856612.1,GeneID:4490923;Name=YP_856612.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;product=enoyl-CoA hydratase/isomerase family protein;protein_id=YP_856612.1;transl_table=11
NC_008570.1	RefSeq	gene	2292398	2293318	.	+	.	ID=gene2081;Dbxref=GeneID:4490924;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=AHA_2083
NC_008570.1	RefSeq	CDS	2292398	2293318	.	+	0	ID=cds2029;Parent=gene2081;Dbxref=Genbank:YP_856613.1,GeneID:4490924;Name=YP_856613.1;Note=identified by match to protein family HMM PF03446%3B match to protein family HMM TIGR01692;gbkey=CDS;gene=mmsB;product=3-hydroxyisobutyrate dehydrogenase;protein_id=YP_856613.1;transl_table=11
NC_008570.1	RefSeq	gene	2293390	2294151	.	+	.	ID=gene2082;Dbxref=GeneID:4490925;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AHA_2084
NC_008570.1	RefSeq	CDS	2293390	2294151	.	+	0	ID=cds2030;Parent=gene2082;Dbxref=Genbank:YP_856614.1,GeneID:4490925;Name=YP_856614.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_856614.1;transl_table=11
NC_008570.1	RefSeq	gene	2294541	2295977	.	+	.	ID=gene2083;Dbxref=GeneID:4490926;Name=AHA_2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2085
NC_008570.1	RefSeq	CDS	2294541	2295977	.	+	0	ID=cds2031;Parent=gene2083;Dbxref=Genbank:YP_856615.1,GeneID:4490926;Name=YP_856615.1;Note=identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845%3B match to protein family HMM TIGR00905;gbkey=CDS;product=arginine/ornithine antiporter;protein_id=YP_856615.1;transl_table=11
NC_008570.1	RefSeq	gene	2296068	2296856	.	+	.	ID=gene2084;Dbxref=GeneID:4490927;Name=AHA_2086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2086
NC_008570.1	RefSeq	CDS	2296068	2296856	.	+	0	ID=cds2032;Parent=gene2084;Dbxref=Genbank:YP_856616.1,GeneID:4490927;Name=YP_856616.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;product=hypothetical protein;protein_id=YP_856616.1;transl_table=11
NC_008570.1	RefSeq	gene	2297699	2298637	.	-	.	ID=gene2085;Dbxref=GeneID:4490928;Name=AHA_2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2087
NC_008570.1	RefSeq	CDS	2297699	2298637	.	-	0	ID=cds2033;Parent=gene2085;Dbxref=Genbank:YP_856617.1,GeneID:4490928;Name=YP_856617.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856617.1;transl_table=11
NC_008570.1	RefSeq	gene	2299168	2299698	.	+	.	ID=gene2086;Dbxref=GeneID:4490929;Name=AHA_2088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2088
NC_008570.1	RefSeq	CDS	2299168	2299698	.	+	0	ID=cds2034;Parent=gene2086;Dbxref=Genbank:YP_856618.1,GeneID:4490929;Name=YP_856618.1;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_856618.1;transl_table=11
NC_008570.1	RefSeq	gene	2299629	2301302	.	+	.	ID=gene2087;Dbxref=GeneID:4490930;Name=AHA_2089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2089
NC_008570.1	RefSeq	CDS	2299629	2301302	.	+	0	ID=cds2035;Parent=gene2087;Dbxref=Genbank:YP_856619.1,GeneID:4490930;Name=YP_856619.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=cyclic diguanylate phosphodiesterase domain-containing protein;protein_id=YP_856619.1;transl_table=11
NC_008570.1	RefSeq	gene	2301307	2302182	.	-	.	ID=gene2088;Dbxref=GeneID:4490931;Name=AHA_2090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2090
NC_008570.1	RefSeq	CDS	2301307	2302182	.	-	0	ID=cds2036;Parent=gene2088;Dbxref=Genbank:YP_856620.1,GeneID:4490931;Name=YP_856620.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator;protein_id=YP_856620.1;transl_table=11
NC_008570.1	RefSeq	gene	2302339	2303772	.	+	.	ID=gene2089;Dbxref=GeneID:4490932;Name=AHA_2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2091
NC_008570.1	RefSeq	CDS	2302339	2303772	.	+	0	ID=cds2037;Parent=gene2089;Dbxref=Genbank:YP_856621.1,GeneID:4490932;Name=YP_856621.1;Note=identified by match to protein family HMM PF00232;gbkey=CDS;product=beta-glucosidase;protein_id=YP_856621.1;transl_table=11
NC_008570.1	RefSeq	gene	2303883	2305706	.	-	.	ID=gene2090;Dbxref=GeneID:4490933;Name=AHA_2092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2092
NC_008570.1	RefSeq	CDS	2303883	2305706	.	-	0	ID=cds2038;Parent=gene2090;Dbxref=Genbank:YP_856622.1,GeneID:4490933;Name=YP_856622.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_856622.1;transl_table=11
NC_008570.1	RefSeq	gene	2305808	2306293	.	-	.	ID=gene2091;Dbxref=GeneID:4490934;Name=AHA_2093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2093
NC_008570.1	RefSeq	CDS	2305808	2306293	.	-	0	ID=cds2039;Parent=gene2091;Dbxref=Genbank:YP_856623.1,GeneID:4490934;Name=YP_856623.1;Note=identified by match to protein family HMM PF00174;gbkey=CDS;product=oxidoreductase molybdopterin binding subunit;protein_id=YP_856623.1;transl_table=11
NC_008570.1	RefSeq	gene	2306540	2307886	.	+	.	ID=gene2092;Dbxref=GeneID:4487653;Name=AHA_2094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2094
NC_008570.1	RefSeq	CDS	2306540	2307886	.	+	0	ID=cds2040;Parent=gene2092;Dbxref=Genbank:YP_856624.1,GeneID:4487653;Name=YP_856624.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;product=HD domain-containing protein;protein_id=YP_856624.1;transl_table=11
NC_008570.1	RefSeq	gene	2307932	2308687	.	-	.	ID=gene2093;Dbxref=GeneID:4487654;Name=AHA_2095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2095
NC_008570.1	RefSeq	CDS	2307932	2308687	.	-	0	ID=cds2041;Parent=gene2093;Dbxref=Genbank:YP_856625.1,GeneID:4487654;Name=YP_856625.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=reductase;protein_id=YP_856625.1;transl_table=11
NC_008570.1	RefSeq	gene	2308814	2309767	.	+	.	ID=gene2094;Dbxref=GeneID:4487655;Name=AHA_2096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2096
NC_008570.1	RefSeq	CDS	2308814	2309767	.	+	0	ID=cds2042;Parent=gene2094;Dbxref=Genbank:YP_856626.1,GeneID:4487655;Name=YP_856626.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856626.1;transl_table=11
NC_008570.1	RefSeq	gene	2309932	2310777	.	+	.	ID=gene2095;Dbxref=GeneID:4487656;Name=AHA_2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2097
NC_008570.1	RefSeq	CDS	2309932	2310777	.	+	0	ID=cds2043;Parent=gene2095;Dbxref=Genbank:YP_856627.1,GeneID:4487656;Name=YP_856627.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease IV;protein_id=YP_856627.1;transl_table=11
NC_008570.1	RefSeq	gene	2310811	2311800	.	+	.	ID=gene2096;Dbxref=GeneID:4487657;Name=AHA_2098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2098
NC_008570.1	RefSeq	CDS	2310811	2311800	.	+	0	ID=cds2044;Parent=gene2096;Dbxref=Genbank:YP_856628.1,GeneID:4487657;Name=YP_856628.1;Note=identified by match to protein family HMM PF01408;gbkey=CDS;product=oxidoreductase%2C NAD-binding;protein_id=YP_856628.1;transl_table=11
NC_008570.1	RefSeq	gene	2311915	2312823	.	-	.	ID=gene2097;Dbxref=GeneID:4487658;Name=AHA_2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2099
NC_008570.1	RefSeq	CDS	2311915	2312823	.	-	0	ID=cds2045;Parent=gene2097;Dbxref=Genbank:YP_856629.1,GeneID:4487658;Name=YP_856629.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856629.1;transl_table=11
NC_008570.1	RefSeq	gene	2312923	2313906	.	+	.	ID=gene2098;Dbxref=GeneID:4487659;Name=AHA_2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2100
NC_008570.1	RefSeq	CDS	2312923	2313906	.	+	0	ID=cds2046;Parent=gene2098;Dbxref=Genbank:YP_856630.1,GeneID:4487659;Name=YP_856630.1;Note=identified by match to protein family HMM PF03595;gbkey=CDS;product=tellurite resistance protein;protein_id=YP_856630.1;transl_table=11
NC_008570.1	RefSeq	gene	2314174	2315163	.	+	.	ID=gene2099;Dbxref=GeneID:4487660;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=AHA_2101
NC_008570.1	RefSeq	CDS	2314174	2315163	.	+	0	ID=cds2047;Parent=gene2099;Dbxref=Genbank:YP_856631.1,GeneID:4487660;Name=YP_856631.1;Note=identified by match to protein family HMM PF03279%3B match to protein family HMM TIGR02208;gbkey=CDS;gene=msbB;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=YP_856631.1;transl_table=11
NC_008570.1	RefSeq	gene	2315332	2316330	.	+	.	ID=gene2100;Dbxref=GeneID:4487661;Name=AHA_2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2102
NC_008570.1	RefSeq	CDS	2315332	2316330	.	+	0	ID=cds2048;Parent=gene2100;Dbxref=Genbank:YP_856632.1,GeneID:4487661;Name=YP_856632.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=YP_856632.1;transl_table=11
NC_008570.1	RefSeq	gene	2316472	2317332	.	+	.	ID=gene2101;Dbxref=GeneID:4487662;Name=AHA_2103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2103
NC_008570.1	RefSeq	CDS	2316472	2317332	.	+	0	ID=cds2049;Parent=gene2101;Dbxref=Genbank:YP_856633.1,GeneID:4487662;Name=YP_856633.1;Note=identified by match to protein family HMM PF01163;gbkey=CDS;product=RIO1 protein;protein_id=YP_856633.1;transl_table=11
NC_008570.1	RefSeq	gene	2317384	2317941	.	-	.	ID=gene2102;Dbxref=GeneID:4487663;Name=AHA_2104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2104
NC_008570.1	RefSeq	CDS	2317384	2317941	.	-	0	ID=cds2050;Parent=gene2102;Dbxref=Genbank:YP_856634.1,GeneID:4487663;Name=YP_856634.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856634.1;transl_table=11
NC_008570.1	RefSeq	gene	2317917	2319290	.	-	.	ID=gene2103;Dbxref=GeneID:4487664;Name=AHA_2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2105
NC_008570.1	RefSeq	CDS	2317917	2319290	.	-	0	ID=cds2051;Parent=gene2103;Dbxref=Genbank:YP_856635.1,GeneID:4487664;Name=YP_856635.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_856635.1;transl_table=11
NC_008570.1	RefSeq	gene	2319364	2320089	.	-	.	ID=gene2104;Dbxref=GeneID:4487665;Name=AHA_2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2106
NC_008570.1	RefSeq	CDS	2319364	2320089	.	-	0	ID=cds2052;Parent=gene2104;Dbxref=Genbank:YP_856636.1,GeneID:4487665;Name=YP_856636.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;product=prolyl-tRNA synthetase;protein_id=YP_856636.1;transl_table=11
NC_008570.1	RefSeq	gene	2320065	2322494	.	+	.	ID=gene2105;Dbxref=GeneID:4487666;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AHA_2107
NC_008570.1	RefSeq	CDS	2320065	2322494	.	+	0	ID=cds2053;Parent=gene2105;Dbxref=Genbank:YP_856637.1,GeneID:4487666;Name=YP_856637.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;gene=polB;product=DNA polymerase II;protein_id=YP_856637.1;transl_table=11
NC_008570.1	RefSeq	gene	2322629	2322705	.	-	.	ID=gene2106;Dbxref=GeneID:4487667;Name=AHA_2108;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2108
NC_008570.1	RefSeq	tRNA	2322629	2322705	.	-	.	ID=rna50;Parent=gene2106;Dbxref=GeneID:4487667;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	2322629	2322705	.	-	.	ID=id51;Parent=rna50;Dbxref=GeneID:4487667;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	2322743	2322819	.	-	.	ID=gene2107;Dbxref=GeneID:4487668;Name=AHA_2109;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2109
NC_008570.1	RefSeq	tRNA	2322743	2322819	.	-	.	ID=rna51;Parent=gene2107;Dbxref=GeneID:4487668;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	2322743	2322819	.	-	.	ID=id52;Parent=rna51;Dbxref=GeneID:4487668;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	2322825	2322902	.	-	.	ID=gene2108;Dbxref=GeneID:4487669;Name=AHA_2110;gbkey=Gene;gene_biotype=tRNA_pseudogene;locus_tag=AHA_2110;pseudo=true
NC_008570.1	RefSeq	tRNA	2322825	2322902	.	-	.	ID=rna52;Parent=gene2108;Dbxref=GeneID:4487669;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_008570.1	RefSeq	exon	2322825	2322902	.	-	.	ID=id53;Parent=rna52;Dbxref=GeneID:4487669;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_008570.1	RefSeq	gene	2322941	2323017	.	-	.	ID=gene2109;Dbxref=GeneID:4487670;Name=AHA_2111;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2111
NC_008570.1	RefSeq	tRNA	2322941	2323017	.	-	.	ID=rna53;Parent=gene2109;Dbxref=GeneID:4487670;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	2322941	2323017	.	-	.	ID=id54;Parent=rna53;Dbxref=GeneID:4487670;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	2323035	2323111	.	-	.	ID=gene2110;Dbxref=GeneID:4487671;Name=AHA_2112;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2112
NC_008570.1	RefSeq	tRNA	2323035	2323111	.	-	.	ID=rna54;Parent=gene2110;Dbxref=GeneID:4487671;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	2323035	2323111	.	-	.	ID=id55;Parent=rna54;Dbxref=GeneID:4487671;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	2323124	2323200	.	-	.	ID=gene2111;Dbxref=GeneID:4487672;Name=AHA_2113;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2113
NC_008570.1	RefSeq	tRNA	2323124	2323200	.	-	.	ID=rna55;Parent=gene2111;Dbxref=GeneID:4487672;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	2323124	2323200	.	-	.	ID=id56;Parent=rna55;Dbxref=GeneID:4487672;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	2323361	2324740	.	-	.	ID=gene2112;Dbxref=GeneID:4487615;Name=AHA_2114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2114
NC_008570.1	RefSeq	CDS	2323361	2324740	.	-	0	ID=cds2054;Parent=gene2112;Dbxref=Genbank:YP_856638.1,GeneID:4487615;Name=YP_856638.1;Note=identified by similarity to SP:P37340%3B match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=YP_856638.1;transl_table=11
NC_008570.1	RefSeq	gene	2324887	2325093	.	-	.	ID=gene2113;Dbxref=GeneID:4487616;Name=AHA_2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2115
NC_008570.1	RefSeq	CDS	2324887	2325093	.	-	0	ID=cds2055;Parent=gene2113;Dbxref=Genbank:YP_856639.1,GeneID:4487616;Name=YP_856639.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856639.1;transl_table=11
NC_008570.1	RefSeq	gene	2325224	2325841	.	+	.	ID=gene2114;Dbxref=GeneID:4487617;Name=ribE-1;gbkey=Gene;gene=ribE-1;gene_biotype=protein_coding;locus_tag=AHA_2116
NC_008570.1	RefSeq	CDS	2325224	2325841	.	+	0	ID=cds2056;Parent=gene2114;Dbxref=Genbank:YP_856640.1,GeneID:4487617;Name=YP_856640.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;gene=ribE-1;product=riboflavin synthase subunit alpha;protein_id=YP_856640.1;transl_table=11
NC_008570.1	RefSeq	gene	2325931	2326134	.	-	.	ID=gene2115;Dbxref=GeneID:4487618;Name=AHA_2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2117
NC_008570.1	RefSeq	CDS	2325931	2326134	.	-	0	ID=cds2057;Parent=gene2115;Dbxref=Genbank:YP_856641.1,GeneID:4487618;Name=YP_856641.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856641.1;transl_table=11
NC_008570.1	RefSeq	gene	2326273	2326932	.	-	.	ID=gene2116;Dbxref=GeneID:4487619;Name=AHA_2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2118
NC_008570.1	RefSeq	CDS	2326273	2326932	.	-	0	ID=cds2058;Parent=gene2116;Dbxref=Genbank:YP_856642.1,GeneID:4487619;Name=YP_856642.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=YP_856642.1;transl_table=11
NC_008570.1	RefSeq	gene	2327059	2328237	.	-	.	ID=gene2117;Dbxref=GeneID:4487620;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AHA_2119
NC_008570.1	RefSeq	CDS	2327059	2328237	.	-	0	ID=cds2059;Parent=gene2117;Dbxref=Genbank:YP_856643.1,GeneID:4487620;Name=YP_856643.1;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;gbkey=CDS;gene=purT;product=phosphoribosylglycinamide formyltransferase 2;protein_id=YP_856643.1;transl_table=11
NC_008570.1	RefSeq	gene	2328323	2329273	.	-	.	ID=gene2118;Dbxref=GeneID:4487621;Name=AHA_2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2120
NC_008570.1	RefSeq	CDS	2328323	2329273	.	-	0	ID=cds2060;Parent=gene2118;Dbxref=Genbank:YP_856644.1,GeneID:4487621;Name=YP_856644.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_856644.1;transl_table=11
NC_008570.1	RefSeq	gene	2329331	2330026	.	+	.	ID=gene2119;Dbxref=GeneID:4487622;Name=AHA_2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2121
NC_008570.1	RefSeq	CDS	2329331	2330026	.	+	0	ID=cds2061;Parent=gene2119;Dbxref=Genbank:YP_856645.1,GeneID:4487622;Name=YP_856645.1;Note=identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358;gbkey=CDS;product=ACP phosphodieterase;protein_id=YP_856645.1;transl_table=11
NC_008570.1	RefSeq	gene	2330123	2330299	.	-	.	ID=gene2120;Dbxref=GeneID:4487623;Name=AHA_2122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2122
NC_008570.1	RefSeq	CDS	2330123	2330299	.	-	0	ID=cds2062;Parent=gene2120;Dbxref=Genbank:YP_856646.1,GeneID:4487623;Name=YP_856646.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856646.1;transl_table=11
NC_008570.1	RefSeq	gene	2330466	2330654	.	-	.	ID=gene2121;Dbxref=GeneID:4487624;Name=AHA_2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2123
NC_008570.1	RefSeq	CDS	2330466	2330654	.	-	0	ID=cds2063;Parent=gene2121;Dbxref=Genbank:YP_856647.1,GeneID:4487624;Name=YP_856647.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856647.1;transl_table=11
NC_008570.1	RefSeq	gene	2330651	2331217	.	-	.	ID=gene2122;Dbxref=GeneID:4487625;Name=AHA_2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2124
NC_008570.1	RefSeq	CDS	2330651	2331217	.	-	0	ID=cds2064;Parent=gene2122;Dbxref=Genbank:YP_856648.1,GeneID:4487625;Name=YP_856648.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_856648.1;transl_table=11
NC_008570.1	RefSeq	gene	2331290	2332504	.	-	.	ID=gene2123;Dbxref=GeneID:4487626;Name=AHA_2125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2125
NC_008570.1	RefSeq	CDS	2331290	2332504	.	-	0	ID=cds2065;Parent=gene2123;Dbxref=Genbank:YP_856649.1,GeneID:4487626;Name=YP_856649.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856649.1;transl_table=11
NC_008570.1	RefSeq	gene	2331344	2332579	.	+	.	ID=gene2124;Dbxref=GeneID:4487627;Name=AHA_2126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2126
NC_008570.1	RefSeq	CDS	2331344	2332579	.	+	0	ID=cds2066;Parent=gene2124;Dbxref=Genbank:YP_856650.1,GeneID:4487627;Name=YP_856650.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856650.1;transl_table=11
NC_008570.1	RefSeq	gene	2332495	2333589	.	+	.	ID=gene2125;Dbxref=GeneID:4487628;Name=AHA_2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2127
NC_008570.1	RefSeq	CDS	2332495	2333589	.	+	0	ID=cds2067;Parent=gene2125;Dbxref=Genbank:YP_856651.1,GeneID:4487628;Name=YP_856651.1;gbkey=CDS;product=nucleic acid binding protein;protein_id=YP_856651.1;transl_table=11
NC_008570.1	RefSeq	gene	2333590	2333901	.	+	.	ID=gene2126;Dbxref=GeneID:4487629;Name=AHA_2128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2128
NC_008570.1	RefSeq	CDS	2333590	2333901	.	+	0	ID=cds2068;Parent=gene2126;Dbxref=Genbank:YP_856652.1,GeneID:4487629;Name=YP_856652.1;Note=identified by match to protein family HMM PF06945;gbkey=CDS;product=hypothetical protein;protein_id=YP_856652.1;transl_table=11
NC_008570.1	RefSeq	gene	2333943	2334443	.	-	.	ID=gene2127;Dbxref=GeneID:4487630;Name=AHA_2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2129
NC_008570.1	RefSeq	CDS	2333943	2334443	.	-	0	ID=cds2069;Parent=gene2127;Dbxref=Genbank:YP_856653.1,GeneID:4487630;Name=YP_856653.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=YP_856653.1;transl_table=11
NC_008570.1	RefSeq	gene	2334565	2335272	.	-	.	ID=gene2128;Dbxref=GeneID:4487631;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AHA_2130
NC_008570.1	RefSeq	CDS	2334565	2335272	.	-	0	ID=cds2070;Parent=gene2128;Dbxref=Genbank:YP_856654.1,GeneID:4487631;Name=YP_856654.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=YP_856654.1;transl_table=11
NC_008570.1	RefSeq	gene	2335326	2335634	.	-	.	ID=gene2129;Dbxref=GeneID:4487632;Name=AHA_2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2131
NC_008570.1	RefSeq	CDS	2335326	2335634	.	-	0	ID=cds2071;Parent=gene2129;Dbxref=Genbank:YP_856655.1,GeneID:4487632;Name=YP_856655.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=YP_856655.1;transl_table=11
NC_008570.1	RefSeq	gene	2335842	2336108	.	-	.	ID=gene2130;Dbxref=GeneID:4487633;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AHA_2132
NC_008570.1	RefSeq	CDS	2335842	2336108	.	-	0	ID=cds2072;Parent=gene2130;Dbxref=Genbank:YP_856656.1,GeneID:4487633;Name=YP_856656.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor MinE;protein_id=YP_856656.1;transl_table=11
NC_008570.1	RefSeq	gene	2336111	2336923	.	-	.	ID=gene2131;Dbxref=GeneID:4488423;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AHA_2133
NC_008570.1	RefSeq	CDS	2336111	2336923	.	-	0	ID=cds2073;Parent=gene2131;Dbxref=Genbank:YP_856657.1,GeneID:4488423;Name=YP_856657.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM TIGR01968;gbkey=CDS;gene=minD;product=septum site-determining protein MinD;protein_id=YP_856657.1;transl_table=11
NC_008570.1	RefSeq	gene	2336942	2337664	.	-	.	ID=gene2132;Dbxref=GeneID:4488424;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AHA_2134
NC_008570.1	RefSeq	CDS	2336942	2337664	.	-	0	ID=cds2074;Parent=gene2132;Dbxref=Genbank:YP_856658.1,GeneID:4488424;Name=YP_856658.1;Note=identified by match to protein family HMM PF03775%3B match to protein family HMM PF05209%3B match to protein family HMM TIGR01222;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=YP_856658.1;transl_table=11
NC_008570.1	RefSeq	gene	2337772	2338053	.	+	.	ID=gene2133;Dbxref=GeneID:4488425;Name=AHA_2135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2135
NC_008570.1	RefSeq	CDS	2337772	2338053	.	+	0	ID=cds2075;Parent=gene2133;Dbxref=Genbank:YP_856659.1,GeneID:4488425;Name=YP_856659.1;Note=identified by match to protein family HMM PF05166;gbkey=CDS;product=hypothetical protein;protein_id=YP_856659.1;transl_table=11
NC_008570.1	RefSeq	gene	2338050	2339009	.	+	.	ID=gene2134;Dbxref=GeneID:4488426;Name=AHA_2136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2136
NC_008570.1	RefSeq	CDS	2338050	2339009	.	+	0	ID=cds2076;Parent=gene2134;Dbxref=Genbank:YP_856660.1,GeneID:4488426;Name=YP_856660.1;Note=identified by match to protein family HMM TIGR02283;gbkey=CDS;product=membrane-bound lytic murein transglycosylase B;protein_id=YP_856660.1;transl_table=11
NC_008570.1	RefSeq	gene	2339228	2340598	.	-	.	ID=gene2135;Dbxref=GeneID:4488427;Name=sdaA-1;gbkey=Gene;gene=sdaA-1;gene_biotype=protein_coding;locus_tag=AHA_2137
NC_008570.1	RefSeq	CDS	2339228	2340598	.	-	0	ID=cds2077;Parent=gene2135;Dbxref=Genbank:YP_856661.1,GeneID:4488427;Name=YP_856661.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00720;gbkey=CDS;gene=sdaA-1;product=L-serine ammonia-lyase;protein_id=YP_856661.1;transl_table=11
NC_008570.1	RefSeq	gene	2340876	2342258	.	-	.	ID=gene2136;Dbxref=GeneID:4488428;Name=sdaA-2;gbkey=Gene;gene=sdaA-2;gene_biotype=protein_coding;locus_tag=AHA_2138
NC_008570.1	RefSeq	CDS	2340876	2342258	.	-	0	ID=cds2078;Parent=gene2136;Dbxref=Genbank:YP_856662.1,GeneID:4488428;Name=YP_856662.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00720;gbkey=CDS;gene=sdaA-2;product=L-serine ammonia-lyase;protein_id=YP_856662.1;transl_table=11
NC_008570.1	RefSeq	gene	2342462	2342788	.	-	.	ID=gene2137;Dbxref=GeneID:4488429;Name=AHA_2139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2139
NC_008570.1	RefSeq	CDS	2342462	2342788	.	-	0	ID=cds2079;Parent=gene2137;Dbxref=Genbank:YP_856663.1,GeneID:4488429;Name=YP_856663.1;Note=identified by match to protein family HMM PF06865;gbkey=CDS;product=hypothetical protein;protein_id=YP_856663.1;transl_table=11
NC_008570.1	RefSeq	gene	2343016	2344254	.	+	.	ID=gene2138;Dbxref=GeneID:4488430;Name=AHA_2140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2140
NC_008570.1	RefSeq	CDS	2343016	2344254	.	+	0	ID=cds2080;Parent=gene2138;Dbxref=Genbank:YP_856664.1,GeneID:4488430;Name=YP_856664.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;product=proton/glutamate symporter;protein_id=YP_856664.1;transl_table=11
NC_008570.1	RefSeq	gene	2344315	2344743	.	-	.	ID=gene2139;Dbxref=GeneID:4488431;Name=AHA_2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2141
NC_008570.1	RefSeq	CDS	2344315	2344743	.	-	0	ID=cds2081;Parent=gene2139;Dbxref=Genbank:YP_856665.1,GeneID:4488431;Name=YP_856665.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=YP_856665.1;transl_table=11
NC_008570.1	RefSeq	gene	2344832	2345995	.	+	.	ID=gene2140;Dbxref=GeneID:4488432;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AHA_2143
NC_008570.1	RefSeq	CDS	2344832	2345995	.	+	0	ID=cds2082;Parent=gene2140;Dbxref=Genbank:YP_856666.1,GeneID:4488432;Name=YP_856666.1;Note=identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930;gbkey=CDS;gene=atoB;product=acetyl-CoA acetyltransferase;protein_id=YP_856666.1;transl_table=11
NC_008570.1	RefSeq	gene	2345992	2347215	.	-	.	ID=gene2141;Dbxref=GeneID:4488433;Name=AHA_2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2142
NC_008570.1	RefSeq	CDS	2345992	2347215	.	-	0	ID=cds2083;Parent=gene2141;Dbxref=Genbank:YP_856667.1,GeneID:4488433;Name=YP_856667.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=sensory box/GGDEF family protein;protein_id=YP_856667.1;transl_table=11
NC_008570.1	RefSeq	gene	2347345	2348601	.	-	.	ID=gene2142;Dbxref=GeneID:4488434;Name=AHA_2144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2144
NC_008570.1	RefSeq	CDS	2347345	2348601	.	-	0	ID=cds2084;Parent=gene2142;Dbxref=Genbank:YP_856668.1,GeneID:4488434;Name=YP_856668.1;Note=identified by match to protein family HMM PF03349;gbkey=CDS;product=long-chain fatty acid transport protein;protein_id=YP_856668.1;transl_table=11
NC_008570.1	RefSeq	gene	2348855	2350153	.	-	.	ID=gene2143;Dbxref=GeneID:4488435;Name=AHA_2145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2145
NC_008570.1	RefSeq	CDS	2348855	2350153	.	-	0	ID=cds2085;Parent=gene2143;Dbxref=Genbank:YP_856669.1,GeneID:4488435;Name=YP_856669.1;Note=identified by match to protein family HMM PF03349;gbkey=CDS;product=long-chain fatty acid transport protein;protein_id=YP_856669.1;transl_table=11
NC_008570.1	RefSeq	gene	2350564	2351307	.	-	.	ID=gene2144;Dbxref=GeneID:4488436;Name=AHA_2146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2146
NC_008570.1	RefSeq	CDS	2350564	2351307	.	-	0	ID=cds2086;Parent=gene2144;Dbxref=Genbank:YP_856670.1,GeneID:4488436;Name=YP_856670.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856670.1;transl_table=11
NC_008570.1	RefSeq	gene	2351300	2351890	.	-	.	ID=gene2145;Dbxref=GeneID:4488437;Name=AHA_2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2147
NC_008570.1	RefSeq	CDS	2351300	2351890	.	-	0	ID=cds2087;Parent=gene2145;Dbxref=Genbank:YP_856671.1,GeneID:4488437;Name=YP_856671.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;product=RNA polymerase sigma factor;protein_id=YP_856671.1;transl_table=11
NC_008570.1	RefSeq	gene	2351924	2353444	.	-	.	ID=gene2146;Dbxref=GeneID:4488438;Name=AHA_2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2148
NC_008570.1	RefSeq	CDS	2351924	2353444	.	-	0	ID=cds2088;Parent=gene2146;Dbxref=Genbank:YP_856672.1,GeneID:4488438;Name=YP_856672.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856672.1;transl_table=11
NC_008570.1	RefSeq	gene	2353441	2354940	.	-	.	ID=gene2147;Dbxref=GeneID:4488439;Name=AHA_2149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2149
NC_008570.1	RefSeq	CDS	2353441	2354940	.	-	0	ID=cds2089;Parent=gene2147;Dbxref=Genbank:YP_856673.1,GeneID:4488439;Name=YP_856673.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=hypothetical protein;protein_id=YP_856673.1;transl_table=11
NC_008570.1	RefSeq	gene	2354940	2355953	.	-	.	ID=gene2148;Dbxref=GeneID:4488440;Name=AHA_2150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2150
NC_008570.1	RefSeq	CDS	2354940	2355953	.	-	0	ID=cds2090;Parent=gene2148;Dbxref=Genbank:YP_856674.1,GeneID:4488440;Name=YP_856674.1;Note=identified by match to protein family HMM PF00092;gbkey=CDS;product=von Willebrand factor A;protein_id=YP_856674.1;transl_table=11
NC_008570.1	RefSeq	gene	2356516	2357460	.	-	.	ID=gene2149;Dbxref=GeneID:4488441;Name=AHA_2151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2151
NC_008570.1	RefSeq	CDS	2356516	2357460	.	-	0	ID=cds2091;Parent=gene2149;Dbxref=Genbank:YP_856675.1,GeneID:4488441;Name=YP_856675.1;Note=identified by match to protein family HMM PF01882;gbkey=CDS;product=hypothetical protein;protein_id=YP_856675.1;transl_table=11
NC_008570.1	RefSeq	gene	2357441	2358391	.	-	.	ID=gene2150;Dbxref=GeneID:4488442;Name=AHA_2152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2152
NC_008570.1	RefSeq	CDS	2357441	2358391	.	-	0	ID=cds2092;Parent=gene2150;Dbxref=Genbank:YP_856676.1,GeneID:4488442;Name=YP_856676.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;product=MoxR protein;protein_id=YP_856676.1;transl_table=11
NC_008570.1	RefSeq	gene	2358585	2359895	.	+	.	ID=gene2151;Dbxref=GeneID:4487969;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AHA_2153
NC_008570.1	RefSeq	CDS	2358585	2359895	.	+	0	ID=cds2093;Parent=gene2151;Dbxref=Genbank:YP_856677.1,GeneID:4487969;Name=YP_856677.1;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;gbkey=CDS;gene=fadI;product=3-ketoacyl-CoA thiolase;protein_id=YP_856677.1;transl_table=11
NC_008570.1	RefSeq	gene	2359895	2362042	.	+	.	ID=gene2152;Dbxref=GeneID:4487970;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AHA_2154
NC_008570.1	RefSeq	CDS	2359895	2362042	.	+	0	ID=cds2094;Parent=gene2152;Dbxref=Genbank:YP_856678.1,GeneID:4487970;Name=YP_856678.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_856678.1;transl_table=11
NC_008570.1	RefSeq	gene	2362338	2362478	.	+	.	ID=gene2153;Dbxref=GeneID:4487971;Name=AHA_2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2155
NC_008570.1	RefSeq	CDS	2362338	2362478	.	+	0	ID=cds2095;Parent=gene2153;Dbxref=Genbank:YP_856679.1,GeneID:4487971;Name=YP_856679.1;Note=identified by match to protein family HMM TIGR02808;gbkey=CDS;product=hypothetical protein;protein_id=YP_856679.1;transl_table=11
NC_008570.1	RefSeq	gene	2362578	2363228	.	+	.	ID=gene2154;Dbxref=GeneID:4487972;Name=AHA_2156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2156
NC_008570.1	RefSeq	CDS	2362578	2363228	.	+	0	ID=cds2096;Parent=gene2154;Dbxref=Genbank:YP_856680.1,GeneID:4487972;Name=YP_856680.1;Note=identified by match to protein family HMM PF07152;gbkey=CDS;product=YaeQ protein;protein_id=YP_856680.1;transl_table=11
NC_008570.1	RefSeq	gene	2363240	2364124	.	+	.	ID=gene2155;Dbxref=GeneID:4487973;Name=AHA_2157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2157
NC_008570.1	RefSeq	CDS	2363240	2364124	.	+	0	ID=cds2097;Parent=gene2155;Dbxref=Genbank:YP_856681.1,GeneID:4487973;Name=YP_856681.1;Note=identified by match to protein family HMM PF03547;gbkey=CDS;product=auxin efflux carrier;protein_id=YP_856681.1;transl_table=11
NC_008570.1	RefSeq	gene	2365002	2365982	.	-	.	ID=gene2156;Dbxref=GeneID:4487974;Name=AHA_2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2158
NC_008570.1	RefSeq	CDS	2365002	2365982	.	-	0	ID=cds2098;Parent=gene2156;Dbxref=Genbank:YP_856682.1,GeneID:4487974;Name=YP_856682.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856682.1;transl_table=11
NC_008570.1	RefSeq	gene	2366991	2367407	.	+	.	ID=gene2157;Dbxref=GeneID:4487975;Name=AHA_2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2159
NC_008570.1	RefSeq	CDS	2366991	2367407	.	+	0	ID=cds2099;Parent=gene2157;Dbxref=Genbank:YP_856683.1,GeneID:4487975;Name=YP_856683.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856683.1;transl_table=11
NC_008570.1	RefSeq	gene	2367459	2369393	.	+	.	ID=gene2158;Dbxref=GeneID:4487976;Name=AHA_2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2160
NC_008570.1	RefSeq	CDS	2367459	2369393	.	+	0	ID=cds2100;Parent=gene2158;Dbxref=Genbank:YP_856684.1,GeneID:4487976;Name=YP_856684.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=sigma-54-dependent transcriptional regulator YgeV;protein_id=YP_856684.1;transl_table=11
NC_008570.1	RefSeq	gene	2369822	2371009	.	+	.	ID=gene2159;Dbxref=GeneID:4487977;Name=AHA_2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2161
NC_008570.1	RefSeq	CDS	2369822	2371009	.	+	0	ID=cds2101;Parent=gene2159;Dbxref=Genbank:YP_856685.1,GeneID:4487977;Name=YP_856685.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729;gbkey=CDS;product=aspartate/ornithine carbamoyltransferase family protein;protein_id=YP_856685.1;transl_table=11
NC_008570.1	RefSeq	gene	2371137	2372336	.	+	.	ID=gene2160;Dbxref=GeneID:4487978;Name=AHA_2162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2162
NC_008570.1	RefSeq	CDS	2371137	2372336	.	+	0	ID=cds2102;Parent=gene2160;Dbxref=Genbank:YP_856686.1,GeneID:4487978;Name=YP_856686.1;Note=catalyzes the formation of pyruvate from 2%2C3-diaminopropionate;gbkey=CDS;product=diaminopropionate ammonia-lyase;protein_id=YP_856686.1;transl_table=11
NC_008570.1	RefSeq	gene	2372460	2373677	.	+	.	ID=gene2161;Dbxref=GeneID:4487979;Name=AHA_2163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2163
NC_008570.1	RefSeq	CDS	2372460	2373677	.	+	0	ID=cds2103;Parent=gene2161;Dbxref=Genbank:YP_856687.2,GeneID:4487979;Name=YP_856687.2;Note=Zn-dependent extracellular dipeptidase%3B similar to succinyl-diaminopimelate desuccinylases;gbkey=CDS;product=peptidase;protein_id=YP_856687.2;transl_table=11
NC_008570.1	RefSeq	gene	2373796	2375220	.	+	.	ID=gene2162;Dbxref=GeneID:4487980;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=AHA_2164
NC_008570.1	RefSeq	CDS	2373796	2375220	.	+	0	ID=cds2104;Parent=gene2162;Dbxref=Genbank:YP_856688.1,GeneID:4487980;Name=YP_856688.1;Note=catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position;gbkey=CDS;gene=hydA;product=phenylhydantoinase;protein_id=YP_856688.1;transl_table=11
NC_008570.1	RefSeq	gene	2375316	2376248	.	+	.	ID=gene2163;Dbxref=GeneID:4487981;Name=arcC-1;gbkey=Gene;gene=arcC-1;gene_biotype=protein_coding;locus_tag=AHA_2165
NC_008570.1	RefSeq	CDS	2375316	2376248	.	+	0	ID=cds2105;Parent=gene2163;Dbxref=Genbank:YP_856689.1,GeneID:4487981;Name=YP_856689.1;Note=catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;gene=arcC-1;product=carbamate kinase;protein_id=YP_856689.1;transl_table=11
NC_008570.1	RefSeq	gene	2376431	2377354	.	+	.	ID=gene2164;Dbxref=GeneID:4487982;Name=AHA_2166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2166
NC_008570.1	RefSeq	CDS	2376431	2377354	.	+	0	ID=cds2106;Parent=gene2164;Dbxref=Genbank:YP_856690.1,GeneID:4487982;Name=YP_856690.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=inner membrane transport protein YijE;protein_id=YP_856690.1;transl_table=11
NC_008570.1	RefSeq	gene	2377424	2379016	.	-	.	ID=gene2165;Dbxref=GeneID:4487983;Name=AHA_2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2167
NC_008570.1	RefSeq	CDS	2377424	2379016	.	-	0	ID=cds2107;Parent=gene2165;Dbxref=Genbank:YP_856691.1,GeneID:4487983;Name=YP_856691.1;Note=identified by match to protein family HMM PF02625;gbkey=CDS;product=xanthine dehydrogenase accessory factor;protein_id=YP_856691.1;transl_table=11
NC_008570.1	RefSeq	gene	2379036	2379884	.	-	.	ID=gene2166;Dbxref=GeneID:4487984;Name=AHA_2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2168
NC_008570.1	RefSeq	CDS	2379036	2379884	.	-	0	ID=cds2108;Parent=gene2166;Dbxref=Genbank:YP_856692.1,GeneID:4487984;Name=YP_856692.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856692.1;transl_table=11
NC_008570.1	RefSeq	gene	2379865	2380518	.	+	.	ID=gene2167;Dbxref=GeneID:4487985;Name=AHA_2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2169
NC_008570.1	RefSeq	CDS	2379865	2380518	.	+	0	ID=cds2109;Parent=gene2167;Dbxref=Genbank:YP_856693.1,GeneID:4487985;Name=YP_856693.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856693.1;transl_table=11
NC_008570.1	RefSeq	gene	2380939	2384049	.	+	.	ID=gene2168;Dbxref=GeneID:4487986;Name=AHA_2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2170
NC_008570.1	RefSeq	CDS	2380939	2384049	.	+	0	ID=cds2110;Parent=gene2168;Dbxref=Genbank:YP_856694.1,GeneID:4487986;Name=YP_856694.1;Note=with YgfM and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfK mutants are unable to reduce selenate%3B involved in purine salvage process%3B seems to act as an oxidoreductase%2C but sequence similarity suggests it is a dihydrothymine dehydrogenase;gbkey=CDS;product=selenate reductase subunit YgfK;protein_id=YP_856694.1;transl_table=11
NC_008570.1	RefSeq	gene	2384080	2385408	.	+	.	ID=gene2169;Dbxref=GeneID:4487987;Name=AHA_2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2171
NC_008570.1	RefSeq	CDS	2384080	2385408	.	+	0	ID=cds2111;Parent=gene2169;Dbxref=Genbank:YP_856695.1,GeneID:4487987;Name=YP_856695.1;Note=in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS;gbkey=CDS;product=chlorohydrolase/aminohydrolase;protein_id=YP_856695.1;transl_table=11
NC_008570.1	RefSeq	gene	2385489	2386265	.	+	.	ID=gene2170;Dbxref=GeneID:4489989;Name=AHA_2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2172
NC_008570.1	RefSeq	CDS	2385489	2386265	.	+	0	ID=cds2112;Parent=gene2170;Dbxref=Genbank:YP_856696.1,GeneID:4489989;Name=YP_856696.1;Note=with YgfK and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfM contains a FAD domain;gbkey=CDS;product=selenate reductase subunit YgfM;protein_id=YP_856696.1;transl_table=11
NC_008570.1	RefSeq	gene	2386265	2389159	.	+	.	ID=gene2171;Dbxref=GeneID:4489990;Name=AHA_2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2173
NC_008570.1	RefSeq	CDS	2386265	2389159	.	+	0	ID=cds2113;Parent=gene2171;Dbxref=Genbank:YP_856697.2,GeneID:4489990;Name=YP_856697.2;Note=with YgfK and YgfM forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B molybdopterin-containing enzyme%3B oxidase activity toward hypoxanthine and xanthine can be detected if these substrates are present at high concentration;gbkey=CDS;product=selenate reductase subunit YgfN;protein_id=YP_856697.2;transl_table=11
NC_008570.1	RefSeq	gene	2389255	2390772	.	+	.	ID=gene2172;Dbxref=GeneID:4489991;Name=AHA_2174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2174
NC_008570.1	RefSeq	CDS	2389255	2390772	.	+	0	ID=cds2114;Parent=gene2172;Dbxref=Genbank:YP_856698.1,GeneID:4489991;Name=YP_856698.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;product=xanthine/uracil permease family protein;protein_id=YP_856698.1;transl_table=11
NC_008570.1	RefSeq	gene	2390797	2392113	.	+	.	ID=gene2173;Dbxref=GeneID:4489992;Name=AHA_2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2175
NC_008570.1	RefSeq	CDS	2390797	2392113	.	+	0	ID=cds2115;Parent=gene2173;Dbxref=Genbank:YP_856699.1,GeneID:4489992;Name=YP_856699.1;Note=Catalyzes the deamination of guanine;gbkey=CDS;product=guanine deaminase;protein_id=YP_856699.1;transl_table=11
NC_008570.1	RefSeq	gene	2392395	2393771	.	+	.	ID=gene2174;Dbxref=GeneID:4489993;Name=AHA_2176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2176
NC_008570.1	RefSeq	CDS	2392395	2393771	.	+	0	ID=cds2116;Parent=gene2174;Dbxref=Genbank:YP_856700.1,GeneID:4489993;Name=YP_856700.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916;gbkey=CDS;product=xanthine/uracil permease family protein;protein_id=YP_856700.1;transl_table=11
NC_008570.1	RefSeq	gene	2394101	2396419	.	+	.	ID=gene2175;Dbxref=GeneID:4489994;Name=AHA_2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2177
NC_008570.1	RefSeq	CDS	2394101	2396419	.	+	0	ID=cds2117;Parent=gene2175;Dbxref=Genbank:YP_856701.1,GeneID:4489994;Name=YP_856701.1;Note=molybdenum cofactor-binding protein%3B participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase subunit XdhA;protein_id=YP_856701.1;transl_table=11
NC_008570.1	RefSeq	gene	2396412	2397290	.	+	.	ID=gene2176;Dbxref=GeneID:4489995;Name=AHA_2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2178
NC_008570.1	RefSeq	CDS	2396412	2397290	.	+	0	ID=cds2118;Parent=gene2176;Dbxref=Genbank:YP_856702.1,GeneID:4489995;Name=YP_856702.1;Note=FAD-binding subunit%3B with XdhA and XdhC participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase subunit XdhB;protein_id=YP_856702.1;transl_table=11
NC_008570.1	RefSeq	gene	2397287	2397772	.	+	.	ID=gene2177;Dbxref=GeneID:4489996;Name=AHA_2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2179
NC_008570.1	RefSeq	CDS	2397287	2397772	.	+	0	ID=cds2119;Parent=gene2177;Dbxref=Genbank:YP_856703.1,GeneID:4489996;Name=YP_856703.1;Note=iron-sulfur-binding subunit%3B with XdhA and XdhB participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase subunit XdhC;protein_id=YP_856703.1;transl_table=11
NC_008570.1	RefSeq	gene	2398305	2401523	.	+	.	ID=gene2178;Dbxref=GeneID:4489997;Name=AHA_2180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2180
NC_008570.1	RefSeq	CDS	2398305	2401523	.	+	0	ID=cds2120;Parent=gene2178;Dbxref=Genbank:YP_856704.1,GeneID:4489997;Name=YP_856704.1;Note=identified by match to protein family HMM PF03160%3B match to protein family HMM PF03372;gbkey=CDS;product=nuclease;protein_id=YP_856704.1;transl_table=11
NC_008570.1	RefSeq	gene	2401661	2402206	.	-	.	ID=gene2179;Dbxref=GeneID:4489998;Name=AHA_2181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2181
NC_008570.1	RefSeq	CDS	2401661	2402206	.	-	0	ID=cds2121;Parent=gene2179;Dbxref=Genbank:YP_856705.1,GeneID:4489998;Name=YP_856705.1;Note=identified by match to protein family HMM PF05433;gbkey=CDS;product=hypothetical protein;protein_id=YP_856705.1;transl_table=11
NC_008570.1	RefSeq	gene	2402710	2402898	.	+	.	ID=gene2180;Dbxref=GeneID:4489999;Name=AHA_2182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2182
NC_008570.1	RefSeq	CDS	2402710	2402898	.	+	0	ID=cds2122;Parent=gene2180;Dbxref=Genbank:YP_856706.1,GeneID:4489999;Name=YP_856706.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856706.1;transl_table=11
NC_008570.1	RefSeq	gene	2402958	2404484	.	-	.	ID=gene2181;Dbxref=GeneID:4490000;Name=AHA_2183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2183
NC_008570.1	RefSeq	CDS	2402958	2404484	.	-	0	ID=cds2123;Parent=gene2181;Dbxref=Genbank:YP_856707.1,GeneID:4490000;Name=YP_856707.1;Note=identified by match to protein family HMM PF03600%3B match to protein family HMM PF03606;gbkey=CDS;product=transporter;protein_id=YP_856707.1;transl_table=11
NC_008570.1	RefSeq	gene	2405120	2406742	.	+	.	ID=gene2182;Dbxref=GeneID:4490001;Name=AHA_2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2184
NC_008570.1	RefSeq	CDS	2405120	2406742	.	+	0	ID=cds2124;Parent=gene2182;Dbxref=Genbank:YP_856708.1,GeneID:4490001;Name=YP_856708.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=AMP-binding protein;protein_id=YP_856708.1;transl_table=11
NC_008570.1	RefSeq	gene	2406798	2408375	.	+	.	ID=gene2183;Dbxref=GeneID:4490002;Name=AHA_2185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2185
NC_008570.1	RefSeq	CDS	2406798	2408375	.	+	0	ID=cds2125;Parent=gene2183;Dbxref=Genbank:YP_856709.1,GeneID:4490002;Name=YP_856709.1;Note=identified by match to protein family HMM PF07693;gbkey=CDS;product=KAP P-loop domain-containing protein;protein_id=YP_856709.1;transl_table=11
NC_008570.1	RefSeq	gene	2408415	2409050	.	-	.	ID=gene2184;Dbxref=GeneID:4490003;Name=AHA_2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2186
NC_008570.1	RefSeq	CDS	2408415	2409050	.	-	0	ID=cds2126;Parent=gene2184;Dbxref=Genbank:YP_856710.1,GeneID:4490003;Name=YP_856710.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase;protein_id=YP_856710.1;transl_table=11
NC_008570.1	RefSeq	gene	2409043	2409816	.	-	.	ID=gene2185;Dbxref=GeneID:4490004;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AHA_2187
NC_008570.1	RefSeq	CDS	2409043	2409816	.	-	0	ID=cds2127;Parent=gene2185;Dbxref=Genbank:YP_856711.1,GeneID:4490004;Name=YP_856711.1;Note=catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase;gbkey=CDS;gene=hisF;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=YP_856711.1;transl_table=11
NC_008570.1	RefSeq	gene	2409997	2413968	.	-	.	ID=gene2186;Dbxref=GeneID:4490005;Name=AHA_2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2188
NC_008570.1	RefSeq	CDS	2409997	2413968	.	-	0	ID=cds2128;Parent=gene2186;Dbxref=Genbank:YP_856712.1,GeneID:4490005;Name=YP_856712.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=hypothetical protein;protein_id=YP_856712.1;transl_table=11
NC_008570.1	RefSeq	gene	2413965	2416118	.	-	.	ID=gene2187;Dbxref=GeneID:4490006;Name=AHA_2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2189
NC_008570.1	RefSeq	CDS	2413965	2416118	.	-	0	ID=cds2129;Parent=gene2187;Dbxref=Genbank:YP_856713.1,GeneID:4490006;Name=YP_856713.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;product=hypothetical protein;protein_id=YP_856713.1;transl_table=11
NC_008570.1	RefSeq	gene	2416111	2417220	.	-	.	ID=gene2188;Dbxref=GeneID:4490007;Name=AHA_2190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2190
NC_008570.1	RefSeq	CDS	2416111	2417220	.	-	0	ID=cds2130;Parent=gene2188;Dbxref=Genbank:YP_856714.1,GeneID:4490007;Name=YP_856714.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=response regulator receiver;protein_id=YP_856714.1;transl_table=11
NC_008570.1	RefSeq	gene	2417386	2418129	.	-	.	ID=gene2189;Dbxref=GeneID:4490008;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AHA_2191
NC_008570.1	RefSeq	CDS	2417386	2418129	.	-	0	ID=cds2131;Parent=gene2189;Dbxref=Genbank:YP_856715.1,GeneID:4490008;Name=YP_856715.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;gene=hisA;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=YP_856715.1;transl_table=11
NC_008570.1	RefSeq	gene	2418135	2418776	.	-	.	ID=gene2190;Dbxref=GeneID:4489951;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AHA_2192
NC_008570.1	RefSeq	CDS	2418135	2418776	.	-	0	ID=cds2132;Parent=gene2190;Dbxref=Genbank:YP_856716.1,GeneID:4489951;Name=YP_856716.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=YP_856716.1;transl_table=11
NC_008570.1	RefSeq	gene	2418776	2419927	.	-	.	ID=gene2191;Dbxref=GeneID:4489952;Name=AHA_2193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2193
NC_008570.1	RefSeq	CDS	2418776	2419927	.	-	0	ID=cds2133;Parent=gene2191;Dbxref=Genbank:YP_856717.1,GeneID:4489952;Name=YP_856717.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=imidazole glycerol-phosphate dehydratase/histidinol phosphatase;protein_id=YP_856717.1;transl_table=11
NC_008570.1	RefSeq	gene	2419943	2421013	.	-	.	ID=gene2192;Dbxref=GeneID:4489953;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AHA_2194
NC_008570.1	RefSeq	CDS	2419943	2421013	.	-	0	ID=cds2134;Parent=gene2192;Dbxref=Genbank:YP_856718.1,GeneID:4489953;Name=YP_856718.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=YP_856718.1;transl_table=11
NC_008570.1	RefSeq	gene	2421010	2422335	.	-	.	ID=gene2193;Dbxref=GeneID:4489954;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AHA_2195
NC_008570.1	RefSeq	CDS	2421010	2422335	.	-	0	ID=cds2135;Parent=gene2193;Dbxref=Genbank:YP_856719.1,GeneID:4489954;Name=YP_856719.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=YP_856719.1;transl_table=11
NC_008570.1	RefSeq	gene	2422348	2423244	.	-	.	ID=gene2194;Dbxref=GeneID:4489955;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AHA_2196
NC_008570.1	RefSeq	CDS	2422348	2423244	.	-	0	ID=cds2136;Parent=gene2194;Dbxref=Genbank:YP_856720.1,GeneID:4489955;Name=YP_856720.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=YP_856720.1;transl_table=11
NC_008570.1	RefSeq	gene	2423584	2423826	.	+	.	ID=gene2195;Dbxref=GeneID:4489957;Name=AHA_2198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2198
NC_008570.1	RefSeq	CDS	2423584	2423826	.	+	0	ID=cds2137;Parent=gene2195;Dbxref=Genbank:YP_856722.1,GeneID:4489957;Name=YP_856722.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856722.1;transl_table=11
NC_008570.1	RefSeq	gene	2423894	2425816	.	+	.	ID=gene2196;Dbxref=GeneID:4489958;Name=AHA_2199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2199
NC_008570.1	RefSeq	CDS	2423894	2425816	.	+	0	ID=cds2138;Parent=gene2196;Dbxref=Genbank:YP_856723.1,GeneID:4489958;Name=YP_856723.1;gbkey=CDS;product=ATP-dependent helicase DinG;protein_id=YP_856723.1;transl_table=11
NC_008570.1	RefSeq	gene	2425813	2425905	.	+	.	ID=gene2197;Dbxref=GeneID:4489959;Name=AHA_2200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2200
NC_008570.1	RefSeq	CDS	2425813	2425905	.	+	0	ID=cds2139;Parent=gene2197;Dbxref=Genbank:YP_856724.1,GeneID:4489959;Name=YP_856724.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856724.1;transl_table=11
NC_008570.1	RefSeq	gene	2425935	2426627	.	+	.	ID=gene2198;Dbxref=GeneID:4489960;Name=AHA_2201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2201
NC_008570.1	RefSeq	CDS	2425935	2426627	.	+	0	ID=cds2140;Parent=gene2198;Dbxref=Genbank:YP_856725.1,GeneID:4489960;Name=YP_856725.1;Note=identified by match to protein family HMM PF00814;gbkey=CDS;product=glycoprotease family protein;protein_id=YP_856725.1;transl_table=11
NC_008570.1	RefSeq	gene	2426722	2427237	.	+	.	ID=gene2199;Dbxref=GeneID:4489961;Name=AHA_2202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2202
NC_008570.1	RefSeq	CDS	2426722	2427237	.	+	0	ID=cds2141;Parent=gene2199;Dbxref=Genbank:YP_856726.1,GeneID:4489961;Name=YP_856726.1;Note=identified by match to protein family HMM PF03843%3B match to protein family HMM TIGR00752;gbkey=CDS;product=Slp family outer membrane lipoprotein;protein_id=YP_856726.1;transl_table=11
NC_008570.1	RefSeq	gene	2427255	2428112	.	+	.	ID=gene2200;Dbxref=GeneID:4489962;Name=AHA_2203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2203
NC_008570.1	RefSeq	CDS	2427255	2428112	.	+	0	ID=cds2142;Parent=gene2200;Dbxref=Genbank:YP_856727.1,GeneID:4489962;Name=YP_856727.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_856727.1;transl_table=11
NC_008570.1	RefSeq	gene	2428311	2429987	.	+	.	ID=gene2201;Dbxref=GeneID:4489963;Name=AHA_2204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2204
NC_008570.1	RefSeq	CDS	2428311	2429987	.	+	0	ID=cds2143;Parent=gene2201;Dbxref=Genbank:YP_856728.1,GeneID:4489963;Name=YP_856728.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain-fatty-acid--CoA ligase;protein_id=YP_856728.1;transl_table=11
NC_008570.1	RefSeq	gene	2430057	2431196	.	+	.	ID=gene2202;Dbxref=GeneID:4489964;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AHA_2205
NC_008570.1	RefSeq	CDS	2430057	2431196	.	+	0	ID=cds2144;Parent=gene2202;Dbxref=Genbank:YP_856729.1,GeneID:4489964;Name=YP_856729.1;Note=identified by match to protein family HMM PF00570%3B match to protein family HMM PF01612%3B match to protein family HMM TIGR01388;gbkey=CDS;gene=rnd;product=ribonuclease D;protein_id=YP_856729.1;transl_table=11
NC_008570.1	RefSeq	gene	2431244	2432002	.	-	.	ID=gene2203;Dbxref=GeneID:4489965;Name=AHA_2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2206
NC_008570.1	RefSeq	CDS	2431244	2432002	.	-	0	ID=cds2145;Parent=gene2203;Dbxref=Genbank:YP_856730.1,GeneID:4489965;Name=YP_856730.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856730.1;transl_table=11
NC_008570.1	RefSeq	gene	2432097	2432465	.	-	.	ID=gene2204;Dbxref=GeneID:4489966;Name=AHA_2207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2207
NC_008570.1	RefSeq	CDS	2432097	2432465	.	-	0	ID=cds2146;Parent=gene2204;Dbxref=Genbank:YP_856731.1,GeneID:4489966;Name=YP_856731.1;gbkey=CDS;product=DksA-type zinc finger protein;protein_id=YP_856731.1;transl_table=11
NC_008570.1	RefSeq	gene	2432563	2433507	.	-	.	ID=gene2205;Dbxref=GeneID:4489967;Name=AHA_2208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2208
NC_008570.1	RefSeq	CDS	2432563	2433507	.	-	0	ID=cds2147;Parent=gene2205;Dbxref=Genbank:YP_856732.1,GeneID:4489967;Name=YP_856732.1;Note=identified by match to protein family HMM PF01207;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=YP_856732.1;transl_table=11
NC_008570.1	RefSeq	gene	2433726	2434103	.	+	.	ID=gene2206;Dbxref=GeneID:4489968;Name=AHA_2209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2209
NC_008570.1	RefSeq	CDS	2433726	2434103	.	+	0	ID=cds2148;Parent=gene2206;Dbxref=Genbank:YP_856733.1,GeneID:4489968;Name=YP_856733.1;Note=identified by match to protein family HMM PF04304;gbkey=CDS;product=hypothetical protein;protein_id=YP_856733.1;transl_table=11
NC_008570.1	RefSeq	gene	2434133	2434780	.	+	.	ID=gene2207;Dbxref=GeneID:4489969;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AHA_2210
NC_008570.1	RefSeq	CDS	2434133	2434780	.	+	0	ID=cds2149;Parent=gene2207;Dbxref=Genbank:YP_856734.1,GeneID:4489969;Name=YP_856734.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=YP_856734.1;transl_table=11
NC_008570.1	RefSeq	gene	2434963	2437512	.	+	.	ID=gene2208;Dbxref=GeneID:4489561;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AHA_2211
NC_008570.1	RefSeq	CDS	2434963	2437512	.	+	0	ID=cds2150;Parent=gene2208;Dbxref=Genbank:YP_856735.1,GeneID:4489561;Name=YP_856735.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397;gbkey=CDS;gene=dnaX;product=DNA polymerase III subunits gamma and tau;protein_id=YP_856735.1;transl_table=11
NC_008570.1	RefSeq	gene	2437628	2437957	.	+	.	ID=gene2209;Dbxref=GeneID:4489562;Name=AHA_2212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2212
NC_008570.1	RefSeq	CDS	2437628	2437957	.	+	0	ID=cds2151;Parent=gene2209;Dbxref=Genbank:YP_856736.1,GeneID:4489562;Name=YP_856736.1;Note=identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;product=hypothetical protein;protein_id=YP_856736.1;transl_table=11
NC_008570.1	RefSeq	gene	2438143	2439831	.	-	.	ID=gene2210;Dbxref=GeneID:4489563;Name=AHA_2213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2213
NC_008570.1	RefSeq	CDS	2438143	2439831	.	-	0	ID=cds2152;Parent=gene2210;Dbxref=Genbank:YP_856737.1,GeneID:4489563;Name=YP_856737.1;Note=identified by match to protein family HMM PF02366;gbkey=CDS;product=dolichyl-phosphate-mannose-protein mannosyltransferase family protein;protein_id=YP_856737.1;transl_table=11
NC_008570.1	RefSeq	gene	2440212	2440325	.	+	.	ID=gene2211;Dbxref=GeneID:4489564;Name=AHA_2214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2214
NC_008570.1	RefSeq	CDS	2440212	2440325	.	+	0	ID=cds2153;Parent=gene2211;Dbxref=Genbank:YP_856738.1,GeneID:4489564;Name=YP_856738.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856738.1;transl_table=11
NC_008570.1	RefSeq	gene	2440869	2441939	.	+	.	ID=gene2212;Dbxref=GeneID:4489565;Name=AHA_2215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2215
NC_008570.1	RefSeq	CDS	2440869	2441939	.	+	0	ID=cds2154;Parent=gene2212;Dbxref=Genbank:YP_856739.1,GeneID:4489565;Name=YP_856739.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_856739.1;transl_table=11
NC_008570.1	RefSeq	gene	2442024	2442446	.	+	.	ID=gene2213;Dbxref=GeneID:4489566;Name=AHA_2216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2216
NC_008570.1	RefSeq	CDS	2442024	2442446	.	+	0	ID=cds2155;Parent=gene2213;Dbxref=Genbank:YP_856740.1,GeneID:4489566;Name=YP_856740.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=YP_856740.1;transl_table=11
NC_008570.1	RefSeq	gene	2442664	2446563	.	+	.	ID=gene2214;Dbxref=GeneID:4489567;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AHA_2217
NC_008570.1	RefSeq	CDS	2442664	2446563	.	+	0	ID=cds2156;Parent=gene2214;Dbxref=Genbank:YP_856741.1,GeneID:4489567;Name=YP_856741.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;gene=hrpA;product=ATP-dependent RNA helicase HrpA;protein_id=YP_856741.1;transl_table=11
NC_008570.1	RefSeq	gene	2446630	2447496	.	+	.	ID=gene2215;Dbxref=GeneID:4489568;Name=AHA_2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2218
NC_008570.1	RefSeq	CDS	2446630	2447496	.	+	0	ID=cds2157;Parent=gene2215;Dbxref=Genbank:YP_856742.1,GeneID:4489568;Name=YP_856742.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856742.1;transl_table=11
NC_008570.1	RefSeq	gene	2447522	2447890	.	+	.	ID=gene2216;Dbxref=GeneID:4489569;Name=AHA_2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2219
NC_008570.1	RefSeq	CDS	2447522	2447890	.	+	0	ID=cds2158;Parent=gene2216;Dbxref=Genbank:YP_856743.1,GeneID:4489569;Name=YP_856743.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=YP_856743.1;transl_table=11
NC_008570.1	RefSeq	gene	2448084	2451266	.	+	.	ID=gene2217;Dbxref=GeneID:4489570;Name=AHA_2220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2220
NC_008570.1	RefSeq	CDS	2448084	2451266	.	+	0	ID=cds2159;Parent=gene2217;Dbxref=Genbank:YP_856744.1,GeneID:4489570;Name=YP_856744.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=two-component system sensor protein;protein_id=YP_856744.1;transl_table=11
NC_008570.1	RefSeq	gene	2451263	2452264	.	+	.	ID=gene2218;Dbxref=GeneID:4489571;Name=AHA_2222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2222
NC_008570.1	RefSeq	CDS	2451263	2452264	.	+	0	ID=cds2160;Parent=gene2218;Dbxref=Genbank:YP_856745.1,GeneID:4489571;Name=YP_856745.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=two-component system regulatory protein;protein_id=YP_856745.1;transl_table=11
NC_008570.1	RefSeq	gene	2452254	2452898	.	-	.	ID=gene2219;Dbxref=GeneID:4489572;Name=AHA_2221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2221
NC_008570.1	RefSeq	CDS	2452254	2452898	.	-	0	ID=cds2161;Parent=gene2219;Dbxref=Genbank:YP_856746.1,GeneID:4489572;Name=YP_856746.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase family protein;protein_id=YP_856746.1;transl_table=11
NC_008570.1	RefSeq	gene	2452926	2454026	.	-	.	ID=gene2220;Dbxref=GeneID:4489573;Name=AHA_2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2223
NC_008570.1	RefSeq	CDS	2452926	2454026	.	-	0	ID=cds2162;Parent=gene2220;Dbxref=Genbank:YP_856747.1,GeneID:4489573;Name=YP_856747.1;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA;gbkey=CDS;product=tRNA 2-selenouridine synthase;protein_id=YP_856747.1;transl_table=11
NC_008570.1	RefSeq	gene	2454023	2455060	.	-	.	ID=gene2221;Dbxref=GeneID:4489574;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AHA_2224
NC_008570.1	RefSeq	CDS	2454023	2455060	.	-	0	ID=cds2163;Parent=gene2221;Dbxref=Genbank:YP_856748.1,GeneID:4489574;Name=YP_856748.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;gene=selD;product=selenophosphate synthetase;protein_id=YP_856748.1;transl_table=11
NC_008570.1	RefSeq	gene	2455446	2456630	.	-	.	ID=gene2222;Dbxref=GeneID:4489575;Name=AHA_2225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2225
NC_008570.1	RefSeq	CDS	2455446	2456630	.	-	0	ID=cds2164;Parent=gene2222;Dbxref=Genbank:YP_856749.1,GeneID:4489575;Name=YP_856749.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;product=acyltransferase;protein_id=YP_856749.1;transl_table=11
NC_008570.1	RefSeq	gene	2456891	2457535	.	+	.	ID=gene2223;Dbxref=GeneID:4489576;Name=AHA_2226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2226
NC_008570.1	RefSeq	CDS	2456891	2457535	.	+	0	ID=cds2165;Parent=gene2223;Dbxref=Genbank:YP_856750.1,GeneID:4489576;Name=YP_856750.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_856750.1;transl_table=11
NC_008570.1	RefSeq	gene	2458017	2459258	.	-	.	ID=gene2224;Dbxref=GeneID:4489577;Name=AHA_2227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2227
NC_008570.1	RefSeq	CDS	2458017	2459258	.	-	0	ID=cds2166;Parent=gene2224;Dbxref=Genbank:YP_856751.1,GeneID:4489577;Name=YP_856751.1;Note=identified by match to protein family HMM PF03602;gbkey=CDS;product=methyltransferase;protein_id=YP_856751.1;transl_table=11
NC_008570.1	RefSeq	gene	2459558	2461072	.	+	.	ID=gene2225;Dbxref=GeneID:4489578;Name=AHA_2228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2228
NC_008570.1	RefSeq	CDS	2459558	2461072	.	+	0	ID=cds2167;Parent=gene2225;Dbxref=Genbank:YP_856752.1,GeneID:4489578;Name=YP_856752.1;Note=identified by similarity to GB:AAC45642.1%3B match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellin;protein_id=YP_856752.1;transl_table=11
NC_008570.1	RefSeq	gene	2461230	2462660	.	-	.	ID=gene2226;Dbxref=GeneID:4489579;Name=AHA_2229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2229
NC_008570.1	RefSeq	CDS	2461230	2462660	.	-	0	ID=cds2168;Parent=gene2226;Dbxref=Genbank:YP_856753.1,GeneID:4489579;Name=YP_856753.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856753.1;transl_table=11
NC_008570.1	RefSeq	gene	2462746	2463018	.	+	.	ID=gene2227;Dbxref=GeneID:4489580;Name=AHA_2230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2230
NC_008570.1	RefSeq	CDS	2462746	2463018	.	+	0	ID=cds2169;Parent=gene2227;Dbxref=Genbank:YP_856754.1,GeneID:4489580;Name=YP_856754.1;Note=identified by match to protein family HMM PF00708;gbkey=CDS;product=acylphosphatase;protein_id=YP_856754.1;transl_table=11
NC_008570.1	RefSeq	gene	2463096	2463731	.	-	.	ID=gene2228;Dbxref=GeneID:4489270;Name=AHA_2231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2231
NC_008570.1	RefSeq	CDS	2463096	2463731	.	-	0	ID=cds2170;Parent=gene2228;Dbxref=Genbank:YP_856755.1,GeneID:4489270;Name=YP_856755.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_856755.1;transl_table=11
NC_008570.1	RefSeq	gene	2463959	2464921	.	+	.	ID=gene2229;Dbxref=GeneID:4489271;Name=AHA_2232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2232
NC_008570.1	RefSeq	CDS	2463959	2464921	.	+	0	ID=cds2171;Parent=gene2229;Dbxref=Genbank:YP_856756.1,GeneID:4489271;Name=YP_856756.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856756.1;transl_table=11
NC_008570.1	RefSeq	gene	2464976	2467009	.	-	.	ID=gene2230;Dbxref=GeneID:4489272;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AHA_2233
NC_008570.1	RefSeq	CDS	2464976	2467009	.	-	0	ID=cds2172;Parent=gene2230;Dbxref=Genbank:YP_856757.1,GeneID:4489272;Name=YP_856757.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=YP_856757.1;transl_table=11
NC_008570.1	RefSeq	gene	2467196	2468278	.	+	.	ID=gene2231;Dbxref=GeneID:4489273;Name=AHA_2234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2234
NC_008570.1	RefSeq	CDS	2467196	2468278	.	+	0	ID=cds2173;Parent=gene2231;Dbxref=Genbank:YP_856758.1,GeneID:4489273;Name=YP_856758.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=mrp protein;protein_id=YP_856758.1;transl_table=11
NC_008570.1	RefSeq	gene	2468388	2469032	.	+	.	ID=gene2232;Dbxref=GeneID:4489274;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AHA_2235
NC_008570.1	RefSeq	CDS	2468388	2469032	.	+	0	ID=cds2174;Parent=gene2232;Dbxref=Genbank:YP_856759.1,GeneID:4489274;Name=YP_856759.1;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;gbkey=CDS;gene=udk;product=uridine kinase;protein_id=YP_856759.1;transl_table=11
NC_008570.1	RefSeq	gene	2469096	2469677	.	+	.	ID=gene2233;Dbxref=GeneID:4489275;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AHA_2236
NC_008570.1	RefSeq	CDS	2469096	2469677	.	+	0	ID=cds2175;Parent=gene2233;Dbxref=Genbank:YP_856760.1,GeneID:4489275;Name=YP_856760.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase;protein_id=YP_856760.1;transl_table=11
NC_008570.1	RefSeq	gene	2469711	2469803	.	-	.	ID=gene2234;Dbxref=GeneID:4489276;Name=AHA_2237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2237
NC_008570.1	RefSeq	CDS	2469711	2469803	.	-	0	ID=cds2176;Parent=gene2234;Dbxref=Genbank:YP_856761.1,GeneID:4489276;Name=YP_856761.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856761.1;transl_table=11
NC_008570.1	RefSeq	gene	2470085	2471554	.	+	.	ID=gene2235;Dbxref=GeneID:4489277;Name=AHA_2238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2238
NC_008570.1	RefSeq	CDS	2470085	2471554	.	+	0	ID=cds2177;Parent=gene2235;Dbxref=Genbank:YP_856762.1,GeneID:4489277;Name=YP_856762.1;Note=identified by match to protein family HMM PF01384;gbkey=CDS;product=inorganic phosphate transporter;protein_id=YP_856762.1;transl_table=11
NC_008570.1	RefSeq	gene	2472370	2475489	.	-	.	ID=gene2236;Dbxref=GeneID:4489278;Name=AHA_2239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2239
NC_008570.1	RefSeq	CDS	2472370	2475489	.	-	0	ID=cds2178;Parent=gene2236;Dbxref=Genbank:YP_856763.1,GeneID:4489278;Name=YP_856763.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757;gbkey=CDS;product=ribonuclease E;protein_id=YP_856763.1;transl_table=11
NC_008570.1	RefSeq	gene	2475862	2476845	.	+	.	ID=gene2237;Dbxref=GeneID:4489279;Name=AHA_2240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2240
NC_008570.1	RefSeq	CDS	2475862	2476845	.	+	0	ID=cds2179;Parent=gene2237;Dbxref=Genbank:YP_856764.1,GeneID:4489279;Name=YP_856764.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=YP_856764.1;transl_table=11
NC_008570.1	RefSeq	gene	2476845	2477492	.	+	.	ID=gene2238;Dbxref=GeneID:4489280;Name=AHA_2241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2241
NC_008570.1	RefSeq	CDS	2476845	2477492	.	+	0	ID=cds2180;Parent=gene2238;Dbxref=Genbank:YP_856765.1,GeneID:4489280;Name=YP_856765.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;product=HAD family hydrolase;protein_id=YP_856765.1;transl_table=11
NC_008570.1	RefSeq	gene	2477570	2478280	.	-	.	ID=gene2239;Dbxref=GeneID:4489281;Name=maf-2;gbkey=Gene;gene=maf-2;gene_biotype=protein_coding;locus_tag=AHA_2242
NC_008570.1	RefSeq	CDS	2477570	2478280	.	-	0	ID=cds2181;Parent=gene2239;Dbxref=Genbank:YP_856766.1,GeneID:4489281;Name=YP_856766.1;Note=identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172;gbkey=CDS;gene=maf-2;product=septum formation protein Maf;protein_id=YP_856766.1;transl_table=11
NC_008570.1	RefSeq	gene	2478335	2479528	.	+	.	ID=gene2240;Dbxref=GeneID:4489282;Name=AHA_2243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2243
NC_008570.1	RefSeq	CDS	2478335	2479528	.	+	0	ID=cds2182;Parent=gene2240;Dbxref=Genbank:YP_856767.1,GeneID:4489282;Name=YP_856767.1;Note=Confers resistance to chloramphenicol;gbkey=CDS;product=multidrug efflux system protein MdtL;protein_id=YP_856767.1;transl_table=11
NC_008570.1	RefSeq	gene	2479531	2480505	.	+	.	ID=gene2241;Dbxref=GeneID:4489283;Name=AHA_2244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2244
NC_008570.1	RefSeq	CDS	2479531	2480505	.	+	0	ID=cds2183;Parent=gene2241;Dbxref=Genbank:YP_856768.1,GeneID:4489283;Name=YP_856768.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YidZ;protein_id=YP_856768.1;transl_table=11
NC_008570.1	RefSeq	gene	2480575	2481240	.	+	.	ID=gene2242;Dbxref=GeneID:4489284;Name=AHA_2245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2245
NC_008570.1	RefSeq	CDS	2480575	2481240	.	+	0	ID=cds2184;Parent=gene2242;Dbxref=Genbank:YP_856769.1,GeneID:4489284;Name=YP_856769.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856769.1;transl_table=11
NC_008570.1	RefSeq	gene	2481489	2482010	.	+	.	ID=gene2243;Dbxref=GeneID:4489285;Name=AHA_2246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2246
NC_008570.1	RefSeq	CDS	2481489	2482010	.	+	0	ID=cds2185;Parent=gene2243;Dbxref=Genbank:YP_856770.1,GeneID:4489285;Name=YP_856770.1;Note=identified by match to protein family HMM PF02620;gbkey=CDS;product=hypothetical protein;protein_id=YP_856770.1;transl_table=11
NC_008570.1	RefSeq	gene	2482030	2482197	.	+	.	ID=gene2244;Dbxref=GeneID:4489286;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AHA_2247
NC_008570.1	RefSeq	CDS	2482030	2482197	.	+	0	ID=cds2186;Parent=gene2244;Dbxref=Genbank:YP_856771.1,GeneID:4489286;Name=YP_856771.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=YP_856771.1;transl_table=11
NC_008570.1	RefSeq	gene	2482207	2483226	.	+	.	ID=gene2245;Dbxref=GeneID:4489287;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AHA_2248
NC_008570.1	RefSeq	CDS	2482207	2483226	.	+	0	ID=cds2187;Parent=gene2245;Dbxref=Genbank:YP_856772.1,GeneID:4489287;Name=YP_856772.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;gbkey=CDS;gene=plsX;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_856772.1;transl_table=11
NC_008570.1	RefSeq	gene	2483234	2484193	.	+	.	ID=gene2246;Dbxref=GeneID:4489288;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AHA_2249
NC_008570.1	RefSeq	CDS	2483234	2484193	.	+	0	ID=cds2188;Parent=gene2246;Dbxref=Genbank:YP_856773.1,GeneID:4489288;Name=YP_856773.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase;protein_id=YP_856773.1;transl_table=11
NC_008570.1	RefSeq	gene	2484263	2485198	.	+	.	ID=gene2247;Dbxref=GeneID:4488717;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AHA_2250
NC_008570.1	RefSeq	CDS	2484263	2485198	.	+	0	ID=cds2189;Parent=gene2247;Dbxref=Genbank:YP_856774.1,GeneID:4488717;Name=YP_856774.1;Note=identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128;gbkey=CDS;gene=fabD;product=malonyl CoA-acyl carrier protein transacylase;protein_id=YP_856774.1;transl_table=11
NC_008570.1	RefSeq	gene	2485212	2485946	.	+	.	ID=gene2248;Dbxref=GeneID:4488718;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AHA_2251
NC_008570.1	RefSeq	CDS	2485212	2485946	.	+	0	ID=cds2190;Parent=gene2248;Dbxref=Genbank:YP_856775.1,GeneID:4488718;Name=YP_856775.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;product=3-oxoacyl-ACP reductase;protein_id=YP_856775.1;transl_table=11
NC_008570.1	RefSeq	gene	2486104	2486340	.	+	.	ID=gene2249;Dbxref=GeneID:4488719;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AHA_2252
NC_008570.1	RefSeq	CDS	2486104	2486340	.	+	0	ID=cds2191;Parent=gene2249;Dbxref=Genbank:YP_856776.1,GeneID:4488719;Name=YP_856776.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=YP_856776.1;transl_table=11
NC_008570.1	RefSeq	gene	2486423	2487664	.	+	.	ID=gene2250;Dbxref=GeneID:4488720;Name=AHA_2253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2253
NC_008570.1	RefSeq	CDS	2486423	2487664	.	+	0	ID=cds2192;Parent=gene2250;Dbxref=Genbank:YP_856777.1,GeneID:4488720;Name=YP_856777.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801;gbkey=CDS;product=beta-ketoacyl-acyl carrier protein synthase II;protein_id=YP_856777.1;transl_table=11
NC_008570.1	RefSeq	gene	2487684	2488538	.	+	.	ID=gene2251;Dbxref=GeneID:4488721;Name=AHA_2254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2254
NC_008570.1	RefSeq	CDS	2487684	2488538	.	+	0	ID=cds2193;Parent=gene2251;Dbxref=Genbank:YP_856778.1,GeneID:4488721;Name=YP_856778.1;Note=identified by match to protein family HMM PF01063;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=YP_856778.1;transl_table=11
NC_008570.1	RefSeq	gene	2488618	2489529	.	+	.	ID=gene2252;Dbxref=GeneID:4488722;Name=AHA_2255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2255
NC_008570.1	RefSeq	CDS	2488618	2489529	.	+	0	ID=cds2194;Parent=gene2252;Dbxref=Genbank:YP_856779.1,GeneID:4488722;Name=YP_856779.1;Note=identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247;gbkey=CDS;product=hypothetical protein;protein_id=YP_856779.1;transl_table=11
NC_008570.1	RefSeq	gene	2489529	2490170	.	+	.	ID=gene2253;Dbxref=GeneID:4488723;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AHA_2256
NC_008570.1	RefSeq	CDS	2489529	2490170	.	+	0	ID=cds2195;Parent=gene2253;Dbxref=Genbank:YP_856780.1,GeneID:4488723;Name=YP_856780.1;Note=identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041;gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=YP_856780.1;transl_table=11
NC_008570.1	RefSeq	gene	2490155	2491102	.	+	.	ID=gene2254;Dbxref=GeneID:4488724;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AHA_2257
NC_008570.1	RefSeq	CDS	2490155	2491102	.	+	0	ID=cds2196;Parent=gene2254;Dbxref=Genbank:YP_856781.1,GeneID:4488724;Name=YP_856781.1;Note=identified by match to protein family HMM TIGR00678;gbkey=CDS;gene=holB;product=DNA polymerase III subunit delta';protein_id=YP_856781.1;transl_table=11
NC_008570.1	RefSeq	gene	2491124	2491903	.	+	.	ID=gene2255;Dbxref=GeneID:4488725;Name=AHA_2258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2258
NC_008570.1	RefSeq	CDS	2491124	2491903	.	+	0	ID=cds2197;Parent=gene2255;Dbxref=Genbank:YP_856782.1,GeneID:4488725;Name=YP_856782.1;Note=identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;product=deoxyribonuclease YcfH;protein_id=YP_856782.1;transl_table=11
NC_008570.1	RefSeq	gene	2492203	2493231	.	+	.	ID=gene2256;Dbxref=GeneID:4488726;Name=AHA_2259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2259
NC_008570.1	RefSeq	CDS	2492203	2493231	.	+	0	ID=cds2198;Parent=gene2256;Dbxref=Genbank:YP_856783.1,GeneID:4488726;Name=YP_856783.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=phage integrase family protein;protein_id=YP_856783.1;transl_table=11
NC_008570.1	RefSeq	gene	2493392	2493694	.	-	.	ID=gene2257;Dbxref=GeneID:4488727;Name=AHA_2260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2260
NC_008570.1	RefSeq	CDS	2493392	2493694	.	-	0	ID=cds2199;Parent=gene2257;Dbxref=Genbank:YP_856784.1,GeneID:4488727;Name=YP_856784.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856784.1;transl_table=11
NC_008570.1	RefSeq	gene	2493410	2493679	.	+	.	ID=gene2258;Dbxref=GeneID:4488728;Name=AHA_2261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2261
NC_008570.1	RefSeq	CDS	2493410	2493679	.	+	0	ID=cds2200;Parent=gene2258;Dbxref=Genbank:YP_856785.1,GeneID:4488728;Name=YP_856785.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856785.1;transl_table=11
NC_008570.1	RefSeq	gene	2493900	2495510	.	-	.	ID=gene2259;Dbxref=GeneID:4488729;Name=yebU;gbkey=Gene;gene=yebU;gene_biotype=protein_coding;locus_tag=AHA_2262
NC_008570.1	RefSeq	CDS	2493900	2495510	.	-	0	ID=cds2201;Parent=gene2259;Dbxref=Genbank:YP_856786.1,GeneID:4488729;Name=YP_856786.1;Note=in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA;gbkey=CDS;gene=yebU;product=rRNA (cytosine-C(5)-)-methyltransferase RsmF;protein_id=YP_856786.1;transl_table=11
NC_008570.1	RefSeq	gene	2495458	2498010	.	-	.	ID=gene2260;Dbxref=GeneID:4488730;Name=AHA_2263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2263
NC_008570.1	RefSeq	CDS	2495458	2498010	.	-	0	ID=cds2202;Parent=gene2260;Dbxref=Genbank:YP_856787.1,GeneID:4488730;Name=YP_856787.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;product=paraquat-inducible protein B;protein_id=YP_856787.1;transl_table=11
NC_008570.1	RefSeq	gene	2498071	2499289	.	-	.	ID=gene2261;Dbxref=GeneID:4488731;Name=AHA_2264;Note=PqiA family protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by match to protein family HMM PF04403;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AHA_2264;pseudo=true
NC_008570.1	RefSeq	gene	2499438	2500325	.	+	.	ID=gene2262;Dbxref=GeneID:4488732;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AHA_2265
NC_008570.1	RefSeq	CDS	2499438	2500325	.	+	0	ID=cds2203;Parent=gene2262;Dbxref=Genbank:YP_856788.1,GeneID:4488732;Name=YP_856788.1;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate;gbkey=CDS;gene=prpB;product=2-methylisocitrate lyase;protein_id=YP_856788.1;transl_table=11
NC_008570.1	RefSeq	gene	2500337	2501464	.	+	.	ID=gene2263;Dbxref=GeneID:4488733;Name=AHA_2266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2266
NC_008570.1	RefSeq	CDS	2500337	2501464	.	+	0	ID=cds2204;Parent=gene2263;Dbxref=Genbank:YP_856789.1,GeneID:4488733;Name=YP_856789.1;Note=identified by match to protein family HMM PF00285%3B match to protein family HMM TIGR01800;gbkey=CDS;product=2-methylcitrate synthase;protein_id=YP_856789.1;transl_table=11
NC_008570.1	RefSeq	gene	2501594	2503039	.	+	.	ID=gene2264;Dbxref=GeneID:4488734;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;gene_synonym=mmgE;locus_tag=AHA_2267
NC_008570.1	RefSeq	CDS	2501594	2503039	.	+	0	ID=cds2205;Parent=gene2264;Dbxref=Genbank:YP_856790.1,GeneID:4488734;Name=YP_856790.1;Note=functions in propionate metabolism%3B involved in isomerization of (2S%2C3S)-methylcitrate to (2R%2C3S)-methylisocitrate%3B also encodes minor aconitase or dehydratase activity%3B aconitase C;gbkey=CDS;gene=prpD;product=2-methylcitrate dehydratase;protein_id=YP_856790.1;transl_table=11
NC_008570.1	RefSeq	gene	2503124	2503867	.	-	.	ID=gene2265;Dbxref=GeneID:4488735;Name=AHA_2268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2268
NC_008570.1	RefSeq	CDS	2503124	2503867	.	-	0	ID=cds2206;Parent=gene2265;Dbxref=Genbank:YP_856791.1,GeneID:4488735;Name=YP_856791.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856791.1;transl_table=11
NC_008570.1	RefSeq	gene	2504067	2504444	.	+	.	ID=gene2266;Dbxref=GeneID:4488736;Name=AHA_2269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2269
NC_008570.1	RefSeq	CDS	2504067	2504444	.	+	0	ID=cds2207;Parent=gene2266;Dbxref=Genbank:YP_856792.1,GeneID:4488736;Name=YP_856792.1;Note=identified by match to protein family HMM TIGR02610;gbkey=CDS;product=polyhydroxyalkanoic acid system protein;protein_id=YP_856792.1;transl_table=11
NC_008570.1	RefSeq	gene	2504725	2506149	.	+	.	ID=gene2267;Dbxref=GeneID:4488923;Name=AHA_2270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2270
NC_008570.1	RefSeq	CDS	2504725	2506149	.	+	0	ID=cds2208;Parent=gene2267;Dbxref=Genbank:YP_856793.1,GeneID:4488923;Name=YP_856793.1;Note=identified by match to protein family HMM PF03007;gbkey=CDS;product=hypothetical protein;protein_id=YP_856793.1;transl_table=11
NC_008570.1	RefSeq	gene	2506265	2507065	.	-	.	ID=gene2268;Dbxref=GeneID:4488924;Name=AHA_2271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2271
NC_008570.1	RefSeq	CDS	2506265	2507065	.	-	0	ID=cds2209;Parent=gene2268;Dbxref=Genbank:YP_856794.1,GeneID:4488924;Name=YP_856794.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856794.1;transl_table=11
NC_008570.1	RefSeq	gene	2507108	2507758	.	-	.	ID=gene2269;Dbxref=GeneID:4488925;Name=AHA_2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2272
NC_008570.1	RefSeq	CDS	2507108	2507758	.	-	0	ID=cds2210;Parent=gene2269;Dbxref=Genbank:YP_856795.1,GeneID:4488925;Name=YP_856795.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_856795.1;transl_table=11
NC_008570.1	RefSeq	gene	2507760	2508944	.	-	.	ID=gene2270;Dbxref=GeneID:4488926;Name=AHA_2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2273
NC_008570.1	RefSeq	CDS	2507760	2508944	.	-	0	ID=cds2211;Parent=gene2270;Dbxref=Genbank:YP_856796.1,GeneID:4488926;Name=YP_856796.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=patatin family phospholipase;protein_id=YP_856796.1;transl_table=11
NC_008570.1	RefSeq	gene	2509033	2509611	.	-	.	ID=gene2271;Dbxref=GeneID:4488927;Name=AHA_2274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2274
NC_008570.1	RefSeq	CDS	2509033	2509611	.	-	0	ID=cds2212;Parent=gene2271;Dbxref=Genbank:YP_856797.1,GeneID:4488927;Name=YP_856797.1;Note=identified by match to protein family HMM PF05597%3B match to protein family HMM TIGR01837;gbkey=CDS;product=protein PhaF;protein_id=YP_856797.1;transl_table=11
NC_008570.1	RefSeq	gene	2509917	2511830	.	+	.	ID=gene2272;Dbxref=GeneID:4488928;Name=AHA_2275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2275
NC_008570.1	RefSeq	CDS	2509917	2511830	.	+	0	ID=cds2213;Parent=gene2272;Dbxref=Genbank:YP_856798.1,GeneID:4488928;Name=YP_856798.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF07993;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_856798.1;transl_table=11
NC_008570.1	RefSeq	gene	2511880	2512803	.	-	.	ID=gene2273;Dbxref=GeneID:4488929;Name=AHA_2276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2276
NC_008570.1	RefSeq	CDS	2511880	2512803	.	-	0	ID=cds2214;Parent=gene2273;Dbxref=Genbank:YP_856799.1,GeneID:4488929;Name=YP_856799.1;Note=identified by match to protein family HMM PF07819;gbkey=CDS;product=lipase transmembrane protein;protein_id=YP_856799.1;transl_table=11
NC_008570.1	RefSeq	gene	2512950	2513264	.	+	.	ID=gene2274;Dbxref=GeneID:4488930;Name=AHA_2277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2277
NC_008570.1	RefSeq	CDS	2512950	2513264	.	+	0	ID=cds2215;Parent=gene2274;Dbxref=Genbank:YP_856800.1,GeneID:4488930;Name=YP_856800.1;Note=identified by match to protein family HMM PF07130;gbkey=CDS;product=DNA damage-inducible protein;protein_id=YP_856800.1;transl_table=11
NC_008570.1	RefSeq	gene	2513543	2514820	.	+	.	ID=gene2275;Dbxref=GeneID:4488931;Name=AHA_2278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2278
NC_008570.1	RefSeq	CDS	2513543	2514820	.	+	0	ID=cds2216;Parent=gene2275;Dbxref=Genbank:YP_856801.1,GeneID:4488931;Name=YP_856801.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=YP_856801.1;transl_table=11
NC_008570.1	RefSeq	gene	2515032	2517011	.	+	.	ID=gene2276;Dbxref=GeneID:4488932;Name=AHA_2279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2279
NC_008570.1	RefSeq	CDS	2515032	2517011	.	+	0	ID=cds2217;Parent=gene2276;Dbxref=Genbank:YP_856802.1,GeneID:4488932;Name=YP_856802.1;gbkey=CDS;product=S16 family peptidase;protein_id=YP_856802.1;transl_table=11
NC_008570.1	RefSeq	gene	2517093	2517653	.	+	.	ID=gene2277;Dbxref=GeneID:4488933;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AHA_2280
NC_008570.1	RefSeq	CDS	2517093	2517653	.	+	0	ID=cds2218;Parent=gene2277;Dbxref=Genbank:YP_856803.1,GeneID:4488933;Name=YP_856803.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;gene=fabA;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=YP_856803.1;transl_table=11
NC_008570.1	RefSeq	gene	2517736	2517912	.	-	.	ID=gene2278;Dbxref=GeneID:4488934;Name=AHA_2281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2281
NC_008570.1	RefSeq	CDS	2517736	2517912	.	-	0	ID=cds2219;Parent=gene2278;Dbxref=Genbank:YP_856804.1,GeneID:4488934;Name=YP_856804.1;Note=identified by match to protein family HMM PF04957;gbkey=CDS;product=ribosome modulation factor;protein_id=YP_856804.1;transl_table=11
NC_008570.1	RefSeq	gene	2518076	2519713	.	-	.	ID=gene2279;Dbxref=GeneID:4488935;Name=AHA_2282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2282
NC_008570.1	RefSeq	CDS	2518076	2519713	.	-	0	ID=cds2220;Parent=gene2279;Dbxref=Genbank:YP_856805.1,GeneID:4488935;Name=YP_856805.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856805.1;transl_table=11
NC_008570.1	RefSeq	gene	2519722	2521644	.	-	.	ID=gene2280;Dbxref=GeneID:4488936;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AHA_2283
NC_008570.1	RefSeq	CDS	2519722	2521644	.	-	0	ID=cds2221;Parent=gene2280;Dbxref=Genbank:YP_856806.1,GeneID:4488936;Name=YP_856806.1;Note=identified by similarity to SP:P43672%3B match to protein family HMM PF00005;gbkey=CDS;gene=uup;product=ABC transporter ATP-binding protein;protein_id=YP_856806.1;transl_table=11
NC_008570.1	RefSeq	gene	2521719	2521949	.	-	.	ID=gene2281;Dbxref=GeneID:4488937;Name=AHA_2284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2284
NC_008570.1	RefSeq	CDS	2521719	2521949	.	-	0	ID=cds2222;Parent=gene2281;Dbxref=Genbank:YP_856807.1,GeneID:4488937;Name=YP_856807.1;Note=identified by match to protein family HMM PF05768;gbkey=CDS;product=thiol-disulfide isomerase and thioredoxin;protein_id=YP_856807.1;transl_table=11
NC_008570.1	RefSeq	gene	2521949	2524111	.	-	.	ID=gene2282;Dbxref=GeneID:4488938;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=AHA_2285
NC_008570.1	RefSeq	CDS	2521949	2524111	.	-	0	ID=cds2223;Parent=gene2282;Dbxref=Genbank:YP_856808.1,GeneID:4488938;Name=YP_856808.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=23S rRNA m(2)G2445 methyltransferase;protein_id=YP_856808.1;transl_table=11
NC_008570.1	RefSeq	gene	2524817	2525353	.	-	.	ID=gene2283;Dbxref=GeneID:4488939;Name=AHA_2286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2286
NC_008570.1	RefSeq	CDS	2524817	2525353	.	-	0	ID=cds2224;Parent=gene2283;Dbxref=Genbank:YP_856809.1,GeneID:4488939;Name=YP_856809.1;Note=identified by match to protein family HMM PF07126;gbkey=CDS;product=hypothetical protein;protein_id=YP_856809.1;transl_table=11
NC_008570.1	RefSeq	gene	2525441	2526451	.	-	.	ID=gene2284;Dbxref=GeneID:4488940;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AHA_2287
NC_008570.1	RefSeq	CDS	2525441	2526451	.	-	0	ID=cds2225;Parent=gene2284;Dbxref=Genbank:YP_856810.1,GeneID:4488940;Name=YP_856810.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase 2;protein_id=YP_856810.1;transl_table=11
NC_008570.1	RefSeq	gene	2526528	2531366	.	-	.	ID=gene2285;Dbxref=GeneID:4488941;Name=AHA_2288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2288
NC_008570.1	RefSeq	CDS	2526528	2531366	.	-	0	ID=cds2226;Parent=gene2285;Dbxref=Genbank:YP_856811.1,GeneID:4488941;Name=YP_856811.1;Note=identified by match to protein family HMM PF05088;gbkey=CDS;product=NAD-glutamate dehydrogenase;protein_id=YP_856811.1;transl_table=11
NC_008570.1	RefSeq	gene	2531645	2531866	.	-	.	ID=gene2286;Dbxref=GeneID:4490726;Name=AHA_2289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2289
NC_008570.1	RefSeq	CDS	2531645	2531866	.	-	0	ID=cds2227;Parent=gene2286;Dbxref=Genbank:YP_856812.1,GeneID:4490726;Name=YP_856812.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856812.1;transl_table=11
NC_008570.1	RefSeq	gene	2531939	2534563	.	-	.	ID=gene2287;Dbxref=GeneID:4490727;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AHA_2290
NC_008570.1	RefSeq	CDS	2531939	2534563	.	-	0	ID=cds2228;Parent=gene2287;Dbxref=Genbank:YP_856813.1,GeneID:4490727;Name=YP_856813.1;Note=identified by similarity to SP:P04825%3B match to protein family HMM PF01433%3B match to protein family HMM TIGR02414;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=YP_856813.1;transl_table=11
NC_008570.1	RefSeq	gene	2534698	2536713	.	-	.	ID=gene2288;Dbxref=GeneID:4490728;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AHA_2291
NC_008570.1	RefSeq	CDS	2534698	2536713	.	-	0	ID=cds2229;Parent=gene2288;Dbxref=Genbank:YP_856814.1,GeneID:4490728;Name=YP_856814.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;gene=prc;product=carboxy-terminal protease;protein_id=YP_856814.1;transl_table=11
NC_008570.1	RefSeq	gene	2536722	2537360	.	-	.	ID=gene2289;Dbxref=GeneID:4490729;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AHA_2292
NC_008570.1	RefSeq	CDS	2536722	2537360	.	-	0	ID=cds2230;Parent=gene2289;Dbxref=Genbank:YP_856815.1,GeneID:4490729;Name=YP_856815.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;gene=proQ;product=solute/DNA competence effector;protein_id=YP_856815.1;transl_table=11
NC_008570.1	RefSeq	gene	2537462	2537920	.	-	.	ID=gene2290;Dbxref=GeneID:4490730;Name=AHA_2293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2293
NC_008570.1	RefSeq	CDS	2537462	2537920	.	-	0	ID=cds2231;Parent=gene2290;Dbxref=Genbank:YP_856816.1,GeneID:4490730;Name=YP_856816.1;Note=identified by match to protein family HMM PF01590;gbkey=CDS;product=GAF domain-containing protein;protein_id=YP_856816.1;transl_table=11
NC_008570.1	RefSeq	gene	2538031	2538489	.	-	.	ID=gene2291;Dbxref=GeneID:4490731;Name=AHA_2294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2294
NC_008570.1	RefSeq	CDS	2538031	2538489	.	-	0	ID=cds2232;Parent=gene2291;Dbxref=Genbank:YP_856817.1,GeneID:4490731;Name=YP_856817.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856817.1;transl_table=11
NC_008570.1	RefSeq	gene	2538707	2540197	.	+	.	ID=gene2292;Dbxref=GeneID:4490732;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=AHA_2295
NC_008570.1	RefSeq	CDS	2538707	2540197	.	+	0	ID=cds2233;Parent=gene2292;Dbxref=Genbank:YP_856818.1,GeneID:4490732;Name=YP_856818.1;Note=CcoN%3B FixN;gbkey=CDS;gene=ccoN;product=cbb3-type cytochrome c oxidase subunit I;protein_id=YP_856818.1;transl_table=11
NC_008570.1	RefSeq	gene	2540214	2540828	.	+	.	ID=gene2293;Dbxref=GeneID:4490733;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=AHA_2296
NC_008570.1	RefSeq	CDS	2540214	2540828	.	+	0	ID=cds2234;Parent=gene2293;Dbxref=Genbank:YP_856819.1,GeneID:4490733;Name=YP_856819.1;Note=CcoO%3B FixO;gbkey=CDS;gene=ccoO;product=cbb3-type cytochrome c oxidase subunit II;protein_id=YP_856819.1;transl_table=11
NC_008570.1	RefSeq	gene	2540841	2541020	.	+	.	ID=gene2294;Dbxref=GeneID:4490734;Name=ccoQ;gbkey=Gene;gene=ccoQ;gene_biotype=protein_coding;locus_tag=AHA_2297
NC_008570.1	RefSeq	CDS	2540841	2541020	.	+	0	ID=cds2235;Parent=gene2294;Dbxref=Genbank:YP_856820.1,GeneID:4490734;Name=YP_856820.1;Note=identified by similarity to GB:AAM76066.1%3B match to protein family HMM PF05545;gbkey=CDS;gene=ccoQ;product=cytochrome c oxidase%2C cbb3-type%2C CcoQ subunit;protein_id=YP_856820.1;transl_table=11
NC_008570.1	RefSeq	gene	2541020	2542009	.	+	.	ID=gene2295;Dbxref=GeneID:4490735;Name=ccoP;gbkey=Gene;gene=ccoP;gene_biotype=protein_coding;locus_tag=AHA_2298
NC_008570.1	RefSeq	CDS	2541020	2542009	.	+	0	ID=cds2236;Parent=gene2295;Dbxref=Genbank:YP_856821.1,GeneID:4490735;Name=YP_856821.1;Note=identified by similarity to GB:AAM76067.1%3B match to protein family HMM PF00034%3B match to protein family HMM TIGR00782;gbkey=CDS;gene=ccoP;product=cytochrome c oxidase%2C cbb3-type subunit III;protein_id=YP_856821.1;transl_table=11
NC_008570.1	RefSeq	gene	2542128	2542616	.	+	.	ID=gene2296;Dbxref=GeneID:4490736;Name=AHA_2299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2299
NC_008570.1	RefSeq	CDS	2542128	2542616	.	+	0	ID=cds2237;Parent=gene2296;Dbxref=Genbank:YP_856822.1,GeneID:4490736;Name=YP_856822.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856822.1;transl_table=11
NC_008570.1	RefSeq	gene	2542709	2545108	.	+	.	ID=gene2297;Dbxref=GeneID:4490737;Name=AHA_2300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2300
NC_008570.1	RefSeq	CDS	2542709	2545108	.	+	0	ID=cds2238;Parent=gene2297;Dbxref=Genbank:YP_856823.1,GeneID:4490737;Name=YP_856823.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;product=copper-translocating P-type ATPase;protein_id=YP_856823.1;transl_table=11
NC_008570.1	RefSeq	gene	2545237	2545428	.	+	.	ID=gene2298;Dbxref=GeneID:4490738;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=AHA_2301
NC_008570.1	RefSeq	CDS	2545237	2545428	.	+	0	ID=cds2239;Parent=gene2298;Dbxref=Genbank:YP_856824.1,GeneID:4490738;Name=YP_856824.1;Note=identified by match to protein family HMM PF03597%3B match to protein family HMM TIGR00847;gbkey=CDS;gene=ccoS;product=cbb3-type cytochrome oxidase maturation protein;protein_id=YP_856824.1;transl_table=11
NC_008570.1	RefSeq	gene	2545412	2546098	.	+	.	ID=gene2299;Dbxref=GeneID:4490739;Name=AHA_2302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2302
NC_008570.1	RefSeq	CDS	2545412	2546098	.	+	0	ID=cds2240;Parent=gene2299;Dbxref=Genbank:YP_856825.1,GeneID:4490739;Name=YP_856825.1;gbkey=CDS;product=integral membrane protein;protein_id=YP_856825.1;transl_table=11
NC_008570.1	RefSeq	gene	2546167	2546922	.	+	.	ID=gene2300;Dbxref=GeneID:4490740;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AHA_2303
NC_008570.1	RefSeq	CDS	2546167	2546922	.	+	0	ID=cds2241;Parent=gene2300;Dbxref=Genbank:YP_856826.1,GeneID:4490740;Name=YP_856826.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;gene=fnr;product=fumarate/nitrate reduction transcriptional regulator;protein_id=YP_856826.1;transl_table=11
NC_008570.1	RefSeq	gene	2547057	2548001	.	+	.	ID=gene2301;Dbxref=GeneID:4490741;Name=AHA_2304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2304
NC_008570.1	RefSeq	CDS	2547057	2548001	.	+	0	ID=cds2242;Parent=gene2301;Dbxref=Genbank:YP_856827.1,GeneID:4490741;Name=YP_856827.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein UspE;protein_id=YP_856827.1;transl_table=11
NC_008570.1	RefSeq	gene	2548069	2548977	.	+	.	ID=gene2302;Dbxref=GeneID:4490742;Name=AHA_2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2305
NC_008570.1	RefSeq	CDS	2548069	2548977	.	+	0	ID=cds2243;Parent=gene2302;Dbxref=Genbank:YP_856828.1,GeneID:4490742;Name=YP_856828.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;gbkey=CDS;product=C32 tRNA thiolase;protein_id=YP_856828.1;transl_table=11
NC_008570.1	RefSeq	gene	2549062	2549739	.	-	.	ID=gene2303;Dbxref=GeneID:4487763;Name=AHA_2306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2306
NC_008570.1	RefSeq	CDS	2549062	2549739	.	-	0	ID=cds2244;Parent=gene2303;Dbxref=Genbank:YP_856829.1,GeneID:4487763;Name=YP_856829.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856829.1;transl_table=11
NC_008570.1	RefSeq	gene	2549811	2550575	.	-	.	ID=gene2304;Dbxref=GeneID:4487764;Name=AHA_2307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2307
NC_008570.1	RefSeq	CDS	2549811	2550575	.	-	0	ID=cds2245;Parent=gene2304;Dbxref=Genbank:YP_856830.1,GeneID:4487764;Name=YP_856830.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856830.1;transl_table=11
NC_008570.1	RefSeq	gene	2550817	2551434	.	+	.	ID=gene2305;Dbxref=GeneID:4487765;Name=AHA_2308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2308
NC_008570.1	RefSeq	CDS	2550817	2551434	.	+	0	ID=cds2246;Parent=gene2305;Dbxref=Genbank:YP_856831.1,GeneID:4487765;Name=YP_856831.1;Note=identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_856831.1;transl_table=11
NC_008570.1	RefSeq	gene	2551640	2552059	.	+	.	ID=gene2306;Dbxref=GeneID:4487766;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AHA_2309
NC_008570.1	RefSeq	CDS	2551640	2552059	.	+	0	ID=cds2247;Parent=gene2306;Dbxref=Genbank:YP_856832.1,GeneID:4487766;Name=YP_856832.1;Note=identified by match to protein family HMM PF05025;gbkey=CDS;gene=rbsD;product=D-ribose-binding protein RbsD;protein_id=YP_856832.1;transl_table=11
NC_008570.1	RefSeq	gene	2552093	2553610	.	+	.	ID=gene2307;Dbxref=GeneID:4487767;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AHA_2310
NC_008570.1	RefSeq	CDS	2552093	2553610	.	+	0	ID=cds2248;Parent=gene2307;Dbxref=Genbank:YP_856833.1,GeneID:4487767;Name=YP_856833.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;gene=rbsA;product=D-ribose transporter ATP-binding protein;protein_id=YP_856833.1;transl_table=11
NC_008570.1	RefSeq	gene	2553607	2554572	.	+	.	ID=gene2308;Dbxref=GeneID:4487768;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AHA_2311
NC_008570.1	RefSeq	CDS	2553607	2554572	.	+	0	ID=cds2249;Parent=gene2308;Dbxref=Genbank:YP_856834.1,GeneID:4487768;Name=YP_856834.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;product=ribose ABC transporter permease;protein_id=YP_856834.1;transl_table=11
NC_008570.1	RefSeq	gene	2554594	2555469	.	+	.	ID=gene2309;Dbxref=GeneID:4487769;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AHA_2312
NC_008570.1	RefSeq	CDS	2554594	2555469	.	+	0	ID=cds2250;Parent=gene2309;Dbxref=Genbank:YP_856835.1,GeneID:4487769;Name=YP_856835.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;gene=rbsB;product=D-ribose transporter subunit RbsB;protein_id=YP_856835.1;transl_table=11
NC_008570.1	RefSeq	gene	2555577	2556509	.	+	.	ID=gene2310;Dbxref=GeneID:4487770;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AHA_2313
NC_008570.1	RefSeq	CDS	2555577	2556509	.	+	0	ID=cds2251;Parent=gene2310;Dbxref=Genbank:YP_856836.1,GeneID:4487770;Name=YP_856836.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=YP_856836.1;transl_table=11
NC_008570.1	RefSeq	gene	2556509	2557513	.	+	.	ID=gene2311;Dbxref=GeneID:4487771;Name=AHA_2314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2314
NC_008570.1	RefSeq	CDS	2556509	2557513	.	+	0	ID=cds2252;Parent=gene2311;Dbxref=Genbank:YP_856837.1,GeneID:4487771;Name=YP_856837.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_856837.1;transl_table=11
NC_008570.1	RefSeq	gene	2557609	2559261	.	-	.	ID=gene2312;Dbxref=GeneID:4487772;Name=AHA_2315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2315
NC_008570.1	RefSeq	CDS	2557609	2559261	.	-	0	ID=cds2253;Parent=gene2312;Dbxref=Genbank:YP_856838.1,GeneID:4487772;Name=YP_856838.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_856838.1;transl_table=11
NC_008570.1	RefSeq	gene	2559258	2559734	.	-	.	ID=gene2313;Dbxref=GeneID:4487773;Name=AHA_2316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2316
NC_008570.1	RefSeq	CDS	2559258	2559734	.	-	0	ID=cds2254;Parent=gene2313;Dbxref=Genbank:YP_856839.1,GeneID:4487773;Name=YP_856839.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856839.1;transl_table=11
NC_008570.1	RefSeq	gene	2559824	2560597	.	-	.	ID=gene2314;Dbxref=GeneID:4487774;Name=AHA_2317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2317
NC_008570.1	RefSeq	CDS	2559824	2560597	.	-	0	ID=cds2255;Parent=gene2314;Dbxref=Genbank:YP_856840.1,GeneID:4487774;Name=YP_856840.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;product=nicotinic acid mononucleotide:5%2C 6-dimethylbenzimidazole(DMB)phosphoribosyltransferase;protein_id=YP_856840.1;transl_table=11
NC_008570.1	RefSeq	gene	2560682	2561281	.	-	.	ID=gene2315;Dbxref=GeneID:4487775;Name=AHA_2318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2318
NC_008570.1	RefSeq	CDS	2560682	2561281	.	-	0	ID=cds2256;Parent=gene2315;Dbxref=Genbank:YP_856841.1,GeneID:4487775;Name=YP_856841.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856841.1;transl_table=11
NC_008570.1	RefSeq	gene	2561285	2562532	.	-	.	ID=gene2316;Dbxref=GeneID:4487776;Name=AHA_2319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2319
NC_008570.1	RefSeq	CDS	2561285	2562532	.	-	0	ID=cds2257;Parent=gene2316;Dbxref=Genbank:YP_856842.1,GeneID:4487776;Name=YP_856842.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=response regulator receiver domain-containing protein;protein_id=YP_856842.1;transl_table=11
NC_008570.1	RefSeq	gene	2562534	2566457	.	-	.	ID=gene2317;Dbxref=GeneID:4487777;Name=AHA_2320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2320
NC_008570.1	RefSeq	CDS	2562534	2566457	.	-	0	ID=cds2258;Parent=gene2317;Dbxref=Genbank:YP_856843.1,GeneID:4487777;Name=YP_856843.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=hypothetical protein;protein_id=YP_856843.1;transl_table=11
NC_008570.1	RefSeq	gene	2566548	2566844	.	-	.	ID=gene2318;Dbxref=GeneID:4487778;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AHA_2321
NC_008570.1	RefSeq	CDS	2566548	2566844	.	-	0	ID=cds2259;Parent=gene2318;Dbxref=Genbank:YP_856844.1,GeneID:4487778;Name=YP_856844.1;Note=identified by match to protein family HMM PF00216%3B match to protein family HMM TIGR00987;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=YP_856844.1;transl_table=11
NC_008570.1	RefSeq	gene	2566848	2569244	.	-	.	ID=gene2319;Dbxref=GeneID:4487779;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AHA_2322
NC_008570.1	RefSeq	CDS	2566848	2569244	.	-	0	ID=cds2260;Parent=gene2319;Dbxref=Genbank:YP_856845.1,GeneID:4487779;Name=YP_856845.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_856845.1;transl_table=11
NC_008570.1	RefSeq	gene	2569257	2570240	.	-	.	ID=gene2320;Dbxref=GeneID:4487780;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AHA_2323
NC_008570.1	RefSeq	CDS	2569257	2570240	.	-	0	ID=cds2261;Parent=gene2320;Dbxref=Genbank:YP_856846.1,GeneID:4487780;Name=YP_856846.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_856846.1;transl_table=11
NC_008570.1	RefSeq	gene	2570557	2570913	.	-	.	ID=gene2321;Dbxref=GeneID:4487781;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AHA_2324
NC_008570.1	RefSeq	CDS	2570557	2570913	.	-	0	ID=cds2262;Parent=gene2321;Dbxref=Genbank:YP_856847.1,GeneID:4487781;Name=YP_856847.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=YP_856847.1;transl_table=11
NC_008570.1	RefSeq	gene	2570929	2571126	.	-	.	ID=gene2322;Dbxref=GeneID:4489754;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AHA_2325
NC_008570.1	RefSeq	CDS	2570929	2571126	.	-	0	ID=cds2263;Parent=gene2322;Dbxref=Genbank:YP_856848.1,GeneID:4489754;Name=YP_856848.1;Note=identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=YP_856848.1;transl_table=11
NC_008570.1	RefSeq	gene	2571213	2571620	.	-	.	ID=gene2323;Dbxref=GeneID:4489755;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AHA_2326
NC_008570.1	RefSeq	CDS	2571213	2571620	.	-	0	ID=cds2264;Parent=gene2323;Dbxref=Genbank:YP_856849.1,GeneID:4489755;Name=YP_856849.1;Note=identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=YP_856849.1;transl_table=11
NC_008570.1	RefSeq	gene	2571765	2573693	.	-	.	ID=gene2324;Dbxref=GeneID:4489756;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AHA_2327
NC_008570.1	RefSeq	CDS	2571765	2573693	.	-	0	ID=cds2265;Parent=gene2324;Dbxref=Genbank:YP_856850.1,GeneID:4489756;Name=YP_856850.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=YP_856850.1;transl_table=11
NC_008570.1	RefSeq	gene	2573930	2574583	.	-	.	ID=gene2325;Dbxref=GeneID:4489757;Name=AHA_2328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2328
NC_008570.1	RefSeq	CDS	2573930	2574583	.	-	0	ID=cds2266;Parent=gene2325;Dbxref=Genbank:YP_856851.1,GeneID:4489757;Name=YP_856851.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856851.1;transl_table=11
NC_008570.1	RefSeq	gene	2574692	2575750	.	+	.	ID=gene2326;Dbxref=GeneID:4489758;Name=AHA_2329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2329
NC_008570.1	RefSeq	CDS	2574692	2575750	.	+	0	ID=cds2267;Parent=gene2326;Dbxref=Genbank:YP_856852.1,GeneID:4489758;Name=YP_856852.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM protein;protein_id=YP_856852.1;transl_table=11
NC_008570.1	RefSeq	gene	2576258	2579005	.	-	.	ID=gene2327;Dbxref=GeneID:4489759;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AHA_2330
NC_008570.1	RefSeq	CDS	2576258	2579005	.	-	0	ID=cds2268;Parent=gene2327;Dbxref=Genbank:YP_856853.1,GeneID:4489759;Name=YP_856853.1;Note=identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=YP_856853.1;transl_table=11
NC_008570.1	RefSeq	gene	2579156	2579923	.	+	.	ID=gene2328;Dbxref=GeneID:4489760;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AHA_2331
NC_008570.1	RefSeq	CDS	2579156	2579923	.	+	0	ID=cds2269;Parent=gene2328;Dbxref=Genbank:YP_856854.1,GeneID:4489760;Name=YP_856854.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF02353%3B match to protein family HMM TIGR01983;gbkey=CDS;gene=ubiG;product=ubiquinone biosynthesis O-methyltransferase;protein_id=YP_856854.1;transl_table=11
NC_008570.1	RefSeq	gene	2579923	2580609	.	+	.	ID=gene2329;Dbxref=GeneID:4489761;Name=gph-1;gbkey=Gene;gene=gph-1;gene_biotype=protein_coding;locus_tag=AHA_2332
NC_008570.1	RefSeq	CDS	2579923	2580609	.	+	0	ID=cds2270;Parent=gene2329;Dbxref=Genbank:YP_856855.1,GeneID:4489761;Name=YP_856855.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01449%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;gene=gph-1;product=phosphoglycolate phosphatase;protein_id=YP_856855.1;transl_table=11
NC_008570.1	RefSeq	gene	2581152	2583455	.	+	.	ID=gene2330;Dbxref=GeneID:4489762;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AHA_2333
NC_008570.1	RefSeq	CDS	2581152	2583455	.	+	0	ID=cds2271;Parent=gene2330;Dbxref=Genbank:YP_856856.1,GeneID:4489762;Name=YP_856856.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdA;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_856856.1;transl_table=11
NC_008570.1	RefSeq	gene	2583522	2584655	.	+	.	ID=gene2331;Dbxref=GeneID:4489763;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AHA_2334
NC_008570.1	RefSeq	CDS	2583522	2584655	.	+	0	ID=cds2272;Parent=gene2331;Dbxref=Genbank:YP_856857.1,GeneID:4489763;Name=YP_856857.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;gene=nrdB;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_856857.1;transl_table=11
NC_008570.1	RefSeq	gene	2584727	2584972	.	+	.	ID=gene2332;Dbxref=GeneID:4489764;Name=AHA_2335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2335
NC_008570.1	RefSeq	CDS	2584727	2584972	.	+	0	ID=cds2273;Parent=gene2332;Dbxref=Genbank:YP_856858.1,GeneID:4489764;Name=YP_856858.1;Note=identified by match to protein family HMM PF00111;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_856858.1;transl_table=11
NC_008570.1	RefSeq	gene	2585091	2586242	.	-	.	ID=gene2333;Dbxref=GeneID:4489765;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AHA_2336
NC_008570.1	RefSeq	CDS	2585091	2586242	.	-	0	ID=cds2274;Parent=gene2333;Dbxref=Genbank:YP_856859.1,GeneID:4489765;Name=YP_856859.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase A;protein_id=YP_856859.1;transl_table=11
NC_008570.1	RefSeq	gene	2586393	2586644	.	+	.	ID=gene2334;Dbxref=GeneID:4489766;Name=AHA_2337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2337
NC_008570.1	RefSeq	CDS	2586393	2586644	.	+	0	ID=cds2275;Parent=gene2334;Dbxref=Genbank:YP_856860.1,GeneID:4489766;Name=YP_856860.1;Note=identified by match to protein family HMM PF06945;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_856860.1;transl_table=11
NC_008570.1	RefSeq	gene	2586669	2587826	.	-	.	ID=gene2335;Dbxref=GeneID:4489767;Name=AHA_2338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2338
NC_008570.1	RefSeq	CDS	2586669	2587826	.	-	0	ID=cds2276;Parent=gene2335;Dbxref=Genbank:YP_856861.1,GeneID:4489767;Name=YP_856861.1;Note=identified by match to protein family HMM PF07221;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=YP_856861.1;transl_table=11
NC_008570.1	RefSeq	gene	2587912	2588760	.	-	.	ID=gene2336;Dbxref=GeneID:4489768;Name=AHA_2339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2339
NC_008570.1	RefSeq	CDS	2587912	2588760	.	-	0	ID=cds2277;Parent=gene2336;Dbxref=Genbank:YP_856862.1,GeneID:4489768;Name=YP_856862.1;Note=identified by match to protein family HMM PF03613;gbkey=CDS;product=fructose permease IID component;protein_id=YP_856862.1;transl_table=11
NC_008570.1	RefSeq	gene	2588760	2589563	.	-	.	ID=gene2337;Dbxref=GeneID:4489769;Name=AHA_2340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2340
NC_008570.1	RefSeq	CDS	2588760	2589563	.	-	0	ID=cds2278;Parent=gene2337;Dbxref=Genbank:YP_856863.1,GeneID:4489769;Name=YP_856863.1;Note=identified by match to protein family HMM PF03609;gbkey=CDS;product=PTS system fructose(mannose)-specific transporter subunit IIC;protein_id=YP_856863.1;transl_table=11
NC_008570.1	RefSeq	gene	2589576	2590070	.	-	.	ID=gene2338;Dbxref=GeneID:4489770;Name=AHA_2341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2341
NC_008570.1	RefSeq	CDS	2589576	2590070	.	-	0	ID=cds2279;Parent=gene2338;Dbxref=Genbank:YP_856864.1,GeneID:4489770;Name=YP_856864.1;Note=identified by match to protein family HMM PF03830;gbkey=CDS;product=pts system mannose-specific eiiab component (eiiab-man);protein_id=YP_856864.1;transl_table=11
NC_008570.1	RefSeq	gene	2590080	2590511	.	-	.	ID=gene2339;Dbxref=GeneID:4489771;Name=AHA_2342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2342
NC_008570.1	RefSeq	CDS	2590080	2590511	.	-	0	ID=cds2280;Parent=gene2339;Dbxref=Genbank:YP_856865.1,GeneID:4489771;Name=YP_856865.1;Note=identified by similarity to GB:AAV43496.1%3B match to protein family HMM PF03610;gbkey=CDS;product=PTS system mannose/fructose/sorbose family transporter subunit IIA;protein_id=YP_856865.1;transl_table=11
NC_008570.1	RefSeq	gene	2590517	2592283	.	-	.	ID=gene2340;Dbxref=GeneID:4489772;Name=AHA_2343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2343
NC_008570.1	RefSeq	CDS	2590517	2592283	.	-	0	ID=cds2281;Parent=gene2340;Dbxref=Genbank:YP_856866.1,GeneID:4489772;Name=YP_856866.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856866.1;transl_table=11
NC_008570.1	RefSeq	gene	2592505	2593503	.	+	.	ID=gene2341;Dbxref=GeneID:4489773;Name=malI-2;gbkey=Gene;gene=malI-2;gene_biotype=protein_coding;locus_tag=AHA_2344
NC_008570.1	RefSeq	CDS	2592505	2593503	.	+	0	ID=cds2282;Parent=gene2341;Dbxref=Genbank:YP_856867.1,GeneID:4489773;Name=YP_856867.1;Note=identified by similarity to SP:P18811%3B match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=malI-2;product=maltose regulon regulatory protein MalI;protein_id=YP_856867.1;transl_table=11
NC_008570.1	RefSeq	gene	2593525	2594094	.	-	.	ID=gene2342;Dbxref=GeneID:4489367;Name=AHA_2345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2345
NC_008570.1	RefSeq	CDS	2593525	2594094	.	-	0	ID=cds2283;Parent=gene2342;Dbxref=Genbank:YP_856868.1,GeneID:4489367;Name=YP_856868.1;Note=catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate isomerase;protein_id=YP_856868.1;transl_table=11
NC_008570.1	RefSeq	gene	2594283	2596007	.	-	.	ID=gene2343;Dbxref=GeneID:4489368;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AHA_2346
NC_008570.1	RefSeq	CDS	2594283	2596007	.	-	0	ID=cds2284;Parent=gene2343;Dbxref=Genbank:YP_856869.1,GeneID:4489368;Name=YP_856869.1;Note=identified by similarity to SP:P20966%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR01427;gbkey=CDS;gene=fruA;product=PTS system%2C fructose-specific%2C IIBC component;protein_id=YP_856869.1;transl_table=11
NC_008570.1	RefSeq	gene	2596004	2596993	.	-	.	ID=gene2344;Dbxref=GeneID:4489369;Name=AHA_2347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2347
NC_008570.1	RefSeq	CDS	2596004	2596993	.	-	0	ID=cds2285;Parent=gene2344;Dbxref=Genbank:YP_856870.1,GeneID:4489369;Name=YP_856870.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=1-phosphofructokinase;protein_id=YP_856870.1;transl_table=11
NC_008570.1	RefSeq	gene	2596993	2598093	.	-	.	ID=gene2345;Dbxref=GeneID:4489370;Name=AHA_2348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2348
NC_008570.1	RefSeq	CDS	2596993	2598093	.	-	0	ID=cds2286;Parent=gene2345;Dbxref=Genbank:YP_856871.1,GeneID:4489370;Name=YP_856871.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;gbkey=CDS;product=bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein;protein_id=YP_856871.1;transl_table=11
NC_008570.1	RefSeq	gene	2598402	2599385	.	+	.	ID=gene2346;Dbxref=GeneID:4489371;Name=fruR;gbkey=Gene;gene=fruR;gene_biotype=protein_coding;locus_tag=AHA_2349
NC_008570.1	RefSeq	CDS	2598402	2599385	.	+	0	ID=cds2287;Parent=gene2346;Dbxref=Genbank:YP_856872.1,GeneID:4489371;Name=YP_856872.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;gene=fruR;product=DNA-binding transcriptional regulator FruR;protein_id=YP_856872.1;transl_table=11
NC_008570.1	RefSeq	gene	2599692	2600885	.	+	.	ID=gene2347;Dbxref=GeneID:4489372;Name=AHA_2350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2350
NC_008570.1	RefSeq	CDS	2599692	2600885	.	+	0	ID=cds2288;Parent=gene2347;Dbxref=Genbank:YP_856873.1,GeneID:4489372;Name=YP_856873.1;Note=identified by match to protein family HMM PF01490%3B match to protein family HMM PF03222%3B match to protein family HMM TIGR00837;gbkey=CDS;product=tyrosine-specific transport protein;protein_id=YP_856873.1;transl_table=11
NC_008570.1	RefSeq	gene	2601147	2601551	.	+	.	ID=gene2348;Dbxref=GeneID:4489373;Name=AHA_2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2351
NC_008570.1	RefSeq	CDS	2601147	2601551	.	+	0	ID=cds2289;Parent=gene2348;Dbxref=Genbank:YP_856874.1,GeneID:4489373;Name=YP_856874.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856874.1;transl_table=11
NC_008570.1	RefSeq	gene	2601551	2602240	.	+	.	ID=gene2349;Dbxref=GeneID:4489374;Name=AHA_2352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2352
NC_008570.1	RefSeq	CDS	2601551	2602240	.	+	0	ID=cds2290;Parent=gene2349;Dbxref=Genbank:YP_856875.1,GeneID:4489374;Name=YP_856875.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856875.1;transl_table=11
NC_008570.1	RefSeq	gene	2602347	2603747	.	-	.	ID=gene2350;Dbxref=GeneID:4489375;Name=AHA_2353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2353
NC_008570.1	RefSeq	CDS	2602347	2603747	.	-	0	ID=cds2291;Parent=gene2350;Dbxref=Genbank:YP_856876.1,GeneID:4489375;Name=YP_856876.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_856876.1;transl_table=11
NC_008570.1	RefSeq	gene	2604071	2604886	.	+	.	ID=gene2351;Dbxref=GeneID:4489376;Name=AHA_2354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2354
NC_008570.1	RefSeq	CDS	2604071	2604886	.	+	0	ID=cds2292;Parent=gene2351;Dbxref=Genbank:YP_856877.1,GeneID:4489376;Name=YP_856877.1;gbkey=CDS;product=extracellular solute-binding protein;protein_id=YP_856877.1;transl_table=11
NC_008570.1	RefSeq	gene	2604987	2606075	.	-	.	ID=gene2352;Dbxref=GeneID:4489377;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AHA_2355
NC_008570.1	RefSeq	CDS	2604987	2606075	.	-	0	ID=cds2293;Parent=gene2352;Dbxref=Genbank:YP_856878.1,GeneID:4489377;Name=YP_856878.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=YP_856878.1;transl_table=11
NC_008570.1	RefSeq	gene	2606088	2607023	.	-	.	ID=gene2353;Dbxref=GeneID:4489378;Name=AHA_2356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2356
NC_008570.1	RefSeq	CDS	2606088	2607023	.	-	0	ID=cds2294;Parent=gene2353;Dbxref=Genbank:YP_856879.1,GeneID:4489378;Name=YP_856879.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_856879.1;transl_table=11
NC_008570.1	RefSeq	gene	2607089	2607613	.	+	.	ID=gene2354;Dbxref=GeneID:4489379;Name=AHA_2357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2357
NC_008570.1	RefSeq	CDS	2607089	2607613	.	+	0	ID=cds2295;Parent=gene2354;Dbxref=Genbank:YP_856880.1,GeneID:4489379;Name=YP_856880.1;Note=identified by match to protein family HMM PF01713;gbkey=CDS;product=Smr/MutS family protein;protein_id=YP_856880.1;transl_table=11
NC_008570.1	RefSeq	gene	2607712	2608122	.	-	.	ID=gene2355;Dbxref=GeneID:4489380;Name=AHA_2358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2358
NC_008570.1	RefSeq	CDS	2607712	2608122	.	-	0	ID=cds2296;Parent=gene2355;Dbxref=Genbank:YP_856881.1,GeneID:4489380;Name=YP_856881.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856881.1;transl_table=11
NC_008570.1	RefSeq	gene	2608344	2609639	.	+	.	ID=gene2356;Dbxref=GeneID:4489381;Name=AHA_2359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2359
NC_008570.1	RefSeq	CDS	2608344	2609639	.	+	0	ID=cds2297;Parent=gene2356;Dbxref=Genbank:YP_856882.1,GeneID:4489381;Name=YP_856882.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensory box protein;protein_id=YP_856882.1;transl_table=11
NC_008570.1	RefSeq	gene	2609693	2610322	.	-	.	ID=gene2357;Dbxref=GeneID:4489382;Name=AHA_2360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2360
NC_008570.1	RefSeq	CDS	2609693	2610322	.	-	0	ID=cds2298;Parent=gene2357;Dbxref=Genbank:YP_856883.1,GeneID:4489382;Name=YP_856883.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;product=phosphoglycerate mutase;protein_id=YP_856883.1;transl_table=11
NC_008570.1	RefSeq	gene	2610372	2610770	.	-	.	ID=gene2358;Dbxref=GeneID:4489383;Name=AHA_2361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2361
NC_008570.1	RefSeq	CDS	2610372	2610770	.	-	0	ID=cds2299;Parent=gene2358;Dbxref=Genbank:YP_856884.1,GeneID:4489383;Name=YP_856884.1;Note=identified by match to protein family HMM PF04828;gbkey=CDS;product=hypothetical protein;protein_id=YP_856884.1;transl_table=11
NC_008570.1	RefSeq	gene	2610907	2611287	.	-	.	ID=gene2359;Dbxref=GeneID:4489384;Name=AHA_2362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2362
NC_008570.1	RefSeq	CDS	2610907	2611287	.	-	0	ID=cds2300;Parent=gene2359;Dbxref=Genbank:YP_856885.1,GeneID:4489384;Name=YP_856885.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_856885.1;transl_table=11
NC_008570.1	RefSeq	gene	2611743	2613191	.	-	.	ID=gene2360;Dbxref=GeneID:4489385;Name=AHA_2363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2363
NC_008570.1	RefSeq	CDS	2611743	2613191	.	-	0	ID=cds2301;Parent=gene2360;Dbxref=Genbank:YP_856886.1,GeneID:4489385;Name=YP_856886.1;Note=identified by match to protein family HMM PF00182%3B match to protein family HMM PF02839;gbkey=CDS;product=carbohydrate binding domain-containing protein;protein_id=YP_856886.1;transl_table=11
NC_008570.1	RefSeq	gene	2613508	2614737	.	-	.	ID=gene2361;Dbxref=GeneID:4490338;Name=AHA_2364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2364
NC_008570.1	RefSeq	CDS	2613508	2614737	.	-	0	ID=cds2302;Parent=gene2361;Dbxref=Genbank:YP_856887.1,GeneID:4490338;Name=YP_856887.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856887.1;transl_table=11
NC_008570.1	RefSeq	gene	2614888	2615541	.	+	.	ID=gene2362;Dbxref=GeneID:4490339;Name=AHA_2365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2365
NC_008570.1	RefSeq	CDS	2614888	2615541	.	+	0	ID=cds2303;Parent=gene2362;Dbxref=Genbank:YP_856888.1,GeneID:4490339;Name=YP_856888.1;Note=identified by match to protein family HMM PF03831;gbkey=CDS;product=PhnA protein;protein_id=YP_856888.1;transl_table=11
NC_008570.1	RefSeq	gene	2615783	2615890	.	+	.	ID=gene2363;Dbxref=GeneID:4490340;Name=AHA_2366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2366
NC_008570.1	RefSeq	CDS	2615783	2615890	.	+	0	ID=cds2304;Parent=gene2363;Dbxref=Genbank:YP_856889.1,GeneID:4490340;Name=YP_856889.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856889.1;transl_table=11
NC_008570.1	RefSeq	gene	2616212	2617489	.	+	.	ID=gene2364;Dbxref=GeneID:4490341;Name=AHA_2367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2367
NC_008570.1	RefSeq	CDS	2616212	2617489	.	+	0	ID=cds2305;Parent=gene2364;Dbxref=Genbank:YP_856890.1,GeneID:4490341;Name=YP_856890.1;Note=identified by match to protein family HMM PF07819;gbkey=CDS;product=hypothetical protein;protein_id=YP_856890.1;transl_table=11
NC_008570.1	RefSeq	gene	2617562	2618449	.	-	.	ID=gene2365;Dbxref=GeneID:4490342;Name=AHA_2368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2368
NC_008570.1	RefSeq	CDS	2617562	2618449	.	-	0	ID=cds2306;Parent=gene2365;Dbxref=Genbank:YP_856891.1,GeneID:4490342;Name=YP_856891.1;Note=identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654;gbkey=CDS;product=phenazine biosynthesis protein PhzF;protein_id=YP_856891.1;transl_table=11
NC_008570.1	RefSeq	gene	2618930	2619760	.	-	.	ID=gene2366;Dbxref=GeneID:4490343;Name=AHA_2369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2369
NC_008570.1	RefSeq	CDS	2618930	2619760	.	-	0	ID=cds2307;Parent=gene2366;Dbxref=Genbank:YP_856892.1,GeneID:4490343;Name=YP_856892.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856892.1;transl_table=11
NC_008570.1	RefSeq	gene	2619757	2620266	.	-	.	ID=gene2367;Dbxref=GeneID:4490344;Name=AHA_2370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2370
NC_008570.1	RefSeq	CDS	2619757	2620266	.	-	0	ID=cds2308;Parent=gene2367;Dbxref=Genbank:YP_856893.1,GeneID:4490344;Name=YP_856893.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=hypothetical protein;protein_id=YP_856893.1;transl_table=11
NC_008570.1	RefSeq	gene	2620319	2620804	.	-	.	ID=gene2368;Dbxref=GeneID:4490345;Name=AHA_2371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2371
NC_008570.1	RefSeq	CDS	2620319	2620804	.	-	0	ID=cds2309;Parent=gene2368;Dbxref=Genbank:YP_856894.1,GeneID:4490345;Name=YP_856894.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856894.1;transl_table=11
NC_008570.1	RefSeq	gene	2620872	2621483	.	-	.	ID=gene2369;Dbxref=GeneID:4490346;Name=AHA_2372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2372
NC_008570.1	RefSeq	CDS	2620872	2621483	.	-	0	ID=cds2310;Parent=gene2369;Dbxref=Genbank:YP_856895.1,GeneID:4490346;Name=YP_856895.1;Note=identified by match to protein family HMM PF01965;gbkey=CDS;product=ThiJ/pfpI family protein;protein_id=YP_856895.1;transl_table=11
NC_008570.1	RefSeq	gene	2621548	2622048	.	-	.	ID=gene2370;Dbxref=GeneID:4490347;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AHA_2373
NC_008570.1	RefSeq	CDS	2621548	2622048	.	-	0	ID=cds2311;Parent=gene2370;Dbxref=Genbank:YP_856896.1,GeneID:4490347;Name=YP_856896.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=YP_856896.1;transl_table=11
NC_008570.1	RefSeq	gene	2622075	2622530	.	-	.	ID=gene2371;Dbxref=GeneID:4490348;Name=AHA_2374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2374
NC_008570.1	RefSeq	CDS	2622075	2622530	.	-	0	ID=cds2312;Parent=gene2371;Dbxref=Genbank:YP_856897.1,GeneID:4490348;Name=YP_856897.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=histone acetyltransferase HPA2;protein_id=YP_856897.1;transl_table=11
NC_008570.1	RefSeq	gene	2622834	2623259	.	-	.	ID=gene2372;Dbxref=GeneID:4490349;Name=AHA_2375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2375
NC_008570.1	RefSeq	CDS	2622834	2623259	.	-	0	ID=cds2313;Parent=gene2372;Dbxref=Genbank:YP_856898.1,GeneID:4490349;Name=YP_856898.1;Note=identified by match to protein family HMM PF03992;gbkey=CDS;product=antibiotic biosynthesis monooxygenase family protein;protein_id=YP_856898.1;transl_table=11
NC_008570.1	RefSeq	gene	2623289	2623666	.	-	.	ID=gene2373;Dbxref=GeneID:4490350;Name=AHA_2376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2376
NC_008570.1	RefSeq	CDS	2623289	2623666	.	-	0	ID=cds2314;Parent=gene2373;Dbxref=Genbank:YP_856899.1,GeneID:4490350;Name=YP_856899.1;Note=identified by match to protein family HMM PF03330%3B match to protein family HMM TIGR00413;gbkey=CDS;product=RplA family protein;protein_id=YP_856899.1;transl_table=11
NC_008570.1	RefSeq	gene	2623859	2628286	.	-	.	ID=gene2374;Dbxref=GeneID:4490351;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AHA_2377
NC_008570.1	RefSeq	CDS	2623859	2628286	.	-	0	ID=cds2315;Parent=gene2374;Dbxref=Genbank:YP_856900.1,GeneID:4490351;Name=YP_856900.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=cell division protein MukB;protein_id=YP_856900.1;transl_table=11
NC_008570.1	RefSeq	gene	2628314	2629051	.	-	.	ID=gene2375;Dbxref=GeneID:4490352;Name=AHA_2378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2378
NC_008570.1	RefSeq	CDS	2628314	2629051	.	-	0	ID=cds2316;Parent=gene2375;Dbxref=Genbank:YP_856901.1,GeneID:4490352;Name=YP_856901.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=YP_856901.1;transl_table=11
NC_008570.1	RefSeq	gene	2629032	2630351	.	-	.	ID=gene2376;Dbxref=GeneID:4490353;Name=AHA_2379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2379
NC_008570.1	RefSeq	CDS	2629032	2630351	.	-	0	ID=cds2317;Parent=gene2376;Dbxref=Genbank:YP_856902.1,GeneID:4490353;Name=YP_856902.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit F;protein_id=YP_856902.1;transl_table=11
NC_008570.1	RefSeq	gene	2630429	2631205	.	-	.	ID=gene2377;Dbxref=GeneID:4490354;Name=AHA_2380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2380
NC_008570.1	RefSeq	CDS	2630429	2631205	.	-	0	ID=cds2318;Parent=gene2377;Dbxref=Genbank:YP_856903.1,GeneID:4490354;Name=YP_856903.1;gbkey=CDS;product=SmtA protein;protein_id=YP_856903.1;transl_table=11
NC_008570.1	RefSeq	gene	2631496	2632275	.	+	.	ID=gene2378;Dbxref=GeneID:4490355;Name=AHA_2381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2381
NC_008570.1	RefSeq	CDS	2631496	2632275	.	+	0	ID=cds2319;Parent=gene2378;Dbxref=Genbank:YP_856904.1,GeneID:4490355;Name=YP_856904.1;Note=identified by match to protein family HMM PF02698;gbkey=CDS;product=integral membrane protein;protein_id=YP_856904.1;transl_table=11
NC_008570.1	RefSeq	gene	2632411	2633166	.	+	.	ID=gene2379;Dbxref=GeneID:4490356;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AHA_2382
NC_008570.1	RefSeq	CDS	2632411	2633166	.	+	0	ID=cds2320;Parent=gene2379;Dbxref=Genbank:YP_856905.1,GeneID:4490356;Name=YP_856905.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=YP_856905.1;transl_table=11
NC_008570.1	RefSeq	gene	2633314	2634285	.	+	.	ID=gene2380;Dbxref=GeneID:4490357;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AHA_2383
NC_008570.1	RefSeq	CDS	2633314	2634285	.	+	0	ID=cds2321;Parent=gene2380;Dbxref=Genbank:YP_856906.1,GeneID:4490357;Name=YP_856906.1;Note=identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=YP_856906.1;transl_table=11
NC_008570.1	RefSeq	gene	2635487	2636743	.	+	.	ID=gene2381;Dbxref=GeneID:4486979;Name=AHA_2384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2384
NC_008570.1	RefSeq	CDS	2635487	2636743	.	+	0	ID=cds2322;Parent=gene2381;Dbxref=Genbank:YP_856907.1,GeneID:4486979;Name=YP_856907.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=M20D family peptidase;protein_id=YP_856907.1;transl_table=11
NC_008570.1	RefSeq	gene	2636825	2637505	.	-	.	ID=gene2382;Dbxref=GeneID:4486980;Name=AHA_2385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2385
NC_008570.1	RefSeq	CDS	2636825	2637505	.	-	0	ID=cds2323;Parent=gene2382;Dbxref=Genbank:YP_856908.1,GeneID:4486980;Name=YP_856908.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254;gbkey=CDS;product=HAD-superfamily (subfamily IA) hydrolase;protein_id=YP_856908.1;transl_table=11
NC_008570.1	RefSeq	gene	2637514	2639010	.	-	.	ID=gene2383;Dbxref=GeneID:4486981;Name=AHA_2386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2386
NC_008570.1	RefSeq	CDS	2637514	2639010	.	-	0	ID=cds2324;Parent=gene2383;Dbxref=Genbank:YP_856909.1,GeneID:4486981;Name=YP_856909.1;Note=identified by match to protein family HMM PF00883;gbkey=CDS;product=cytosol aminopeptidase;protein_id=YP_856909.1;transl_table=11
NC_008570.1	RefSeq	gene	2639183	2639259	.	-	.	ID=gene2384;Dbxref=GeneID:4486982;Name=AHA_2387;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2387
NC_008570.1	RefSeq	tRNA	2639183	2639259	.	-	.	ID=rna56;Parent=gene2384;Dbxref=GeneID:4486982;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2639183	2639259	.	-	.	ID=id57;Parent=rna56;Dbxref=GeneID:4486982;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2639357	2639433	.	-	.	ID=gene2385;Dbxref=GeneID:4486983;Name=AHA_2388;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2388
NC_008570.1	RefSeq	tRNA	2639357	2639433	.	-	.	ID=rna57;Parent=gene2385;Dbxref=GeneID:4486983;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2639357	2639433	.	-	.	ID=id58;Parent=rna57;Dbxref=GeneID:4486983;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2639530	2639606	.	-	.	ID=gene2386;Dbxref=GeneID:4486984;Name=AHA_2389;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2389
NC_008570.1	RefSeq	tRNA	2639530	2639606	.	-	.	ID=rna58;Parent=gene2386;Dbxref=GeneID:4486984;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2639530	2639606	.	-	.	ID=id59;Parent=rna58;Dbxref=GeneID:4486984;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2639703	2639779	.	-	.	ID=gene2387;Dbxref=GeneID:4486985;Name=AHA_2390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2390
NC_008570.1	RefSeq	tRNA	2639703	2639779	.	-	.	ID=rna59;Parent=gene2387;Dbxref=GeneID:4486985;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2639703	2639779	.	-	.	ID=id60;Parent=rna59;Dbxref=GeneID:4486985;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2639876	2639952	.	-	.	ID=gene2388;Dbxref=GeneID:4486986;Name=AHA_2391;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2391
NC_008570.1	RefSeq	tRNA	2639876	2639952	.	-	.	ID=rna60;Parent=gene2388;Dbxref=GeneID:4486986;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2639876	2639952	.	-	.	ID=id61;Parent=rna60;Dbxref=GeneID:4486986;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2640049	2640125	.	-	.	ID=gene2389;Dbxref=GeneID:4486987;Name=AHA_2392;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2392
NC_008570.1	RefSeq	tRNA	2640049	2640125	.	-	.	ID=rna61;Parent=gene2389;Dbxref=GeneID:4486987;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2640049	2640125	.	-	.	ID=id62;Parent=rna61;Dbxref=GeneID:4486987;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2640222	2640298	.	-	.	ID=gene2390;Dbxref=GeneID:4486988;Name=AHA_2393;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2393
NC_008570.1	RefSeq	tRNA	2640222	2640298	.	-	.	ID=rna62;Parent=gene2390;Dbxref=GeneID:4486988;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2640222	2640298	.	-	.	ID=id63;Parent=rna62;Dbxref=GeneID:4486988;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2640391	2640467	.	-	.	ID=gene2391;Dbxref=GeneID:4486989;Name=AHA_2394;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2394
NC_008570.1	RefSeq	tRNA	2640391	2640467	.	-	.	ID=rna63;Parent=gene2391;Dbxref=GeneID:4486989;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	2640391	2640467	.	-	.	ID=id64;Parent=rna63;Dbxref=GeneID:4486989;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	2640664	2642727	.	+	.	ID=gene2392;Dbxref=GeneID:4486990;Name=glgX-1;gbkey=Gene;gene=glgX-1;gene_biotype=protein_coding;locus_tag=AHA_2395
NC_008570.1	RefSeq	CDS	2640664	2642727	.	+	0	ID=cds2325;Parent=gene2392;Dbxref=Genbank:YP_856910.1,GeneID:4486990;Name=YP_856910.1;Note=identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02100;gbkey=CDS;gene=glgX-1;product=glycogen debranching protein GlgX;protein_id=YP_856910.1;transl_table=11
NC_008570.1	RefSeq	gene	2642798	2643517	.	-	.	ID=gene2393;Dbxref=GeneID:4486991;Name=AHA_2396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2396
NC_008570.1	RefSeq	CDS	2642798	2643517	.	-	0	ID=cds2326;Parent=gene2393;Dbxref=Genbank:YP_856911.1,GeneID:4486991;Name=YP_856911.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856911.1;transl_table=11
NC_008570.1	RefSeq	gene	2643727	2645364	.	-	.	ID=gene2394;Dbxref=GeneID:4486992;Name=AHA_2397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2397
NC_008570.1	RefSeq	CDS	2643727	2645364	.	-	0	ID=cds2327;Parent=gene2394;Dbxref=Genbank:YP_856912.1,GeneID:4486992;Name=YP_856912.1;gbkey=CDS;product=RedF-like protein;protein_id=YP_856912.1;transl_table=11
NC_008570.1	RefSeq	gene	2645626	2646513	.	-	.	ID=gene2395;Dbxref=GeneID:4486993;Name=AHA_2398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2398
NC_008570.1	RefSeq	CDS	2645626	2646513	.	-	0	ID=cds2328;Parent=gene2395;Dbxref=Genbank:YP_856913.1,GeneID:4486993;Name=YP_856913.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_856913.1;transl_table=11
NC_008570.1	RefSeq	gene	2646549	2647592	.	+	.	ID=gene2396;Dbxref=GeneID:4486994;Name=AHA_2399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2399
NC_008570.1	RefSeq	CDS	2646549	2647592	.	+	0	ID=cds2329;Parent=gene2396;Dbxref=Genbank:YP_856914.1,GeneID:4486994;Name=YP_856914.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=membrane protein;protein_id=YP_856914.1;transl_table=11
NC_008570.1	RefSeq	gene	2647650	2648504	.	+	.	ID=gene2397;Dbxref=GeneID:4486995;Name=AHA_2400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2400
NC_008570.1	RefSeq	CDS	2647650	2648504	.	+	0	ID=cds2330;Parent=gene2397;Dbxref=Genbank:YP_856915.1,GeneID:4486995;Name=YP_856915.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_856915.1;transl_table=11
NC_008570.1	RefSeq	gene	2648588	2649367	.	-	.	ID=gene2398;Dbxref=GeneID:4486996;Name=AHA_2401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2401
NC_008570.1	RefSeq	CDS	2648588	2649367	.	-	0	ID=cds2331;Parent=gene2398;Dbxref=Genbank:YP_856916.1,GeneID:4486996;Name=YP_856916.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;product=hypothetical protein;protein_id=YP_856916.1;transl_table=11
NC_008570.1	RefSeq	gene	2649575	2650336	.	-	.	ID=gene2399;Dbxref=GeneID:4486997;Name=AHA_2402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2402
NC_008570.1	RefSeq	CDS	2649575	2650336	.	-	0	ID=cds2332;Parent=gene2399;Dbxref=Genbank:YP_856917.1,GeneID:4486997;Name=YP_856917.1;Note=identified by match to protein family HMM PF03942;gbkey=CDS;product=DTW protein;protein_id=YP_856917.1;transl_table=11
NC_008570.1	RefSeq	gene	2650504	2650917	.	+	.	ID=gene2400;Dbxref=GeneID:4488462;Name=AHA_2403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2403
NC_008570.1	RefSeq	CDS	2650504	2650917	.	+	0	ID=cds2333;Parent=gene2400;Dbxref=Genbank:YP_856918.1,GeneID:4488462;Name=YP_856918.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=hypothetical protein;protein_id=YP_856918.1;transl_table=11
NC_008570.1	RefSeq	gene	2650996	2651985	.	-	.	ID=gene2401;Dbxref=GeneID:4488463;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=AHA_2404
NC_008570.1	RefSeq	CDS	2650996	2651985	.	-	0	ID=cds2334;Parent=gene2401;Dbxref=Genbank:YP_856919.1,GeneID:4488463;Name=YP_856919.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanyl-alanine synthetase A;protein_id=YP_856919.1;transl_table=11
NC_008570.1	RefSeq	gene	2652186	2652881	.	-	.	ID=gene2402;Dbxref=GeneID:4488464;Name=AHA_2405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2405
NC_008570.1	RefSeq	CDS	2652186	2652881	.	-	0	ID=cds2335;Parent=gene2402;Dbxref=Genbank:YP_856920.1,GeneID:4488464;Name=YP_856920.1;Note=identified by match to protein family HMM PF03171;gbkey=CDS;product=SM-20 domain-containing protein;protein_id=YP_856920.1;transl_table=11
NC_008570.1	RefSeq	gene	2653082	2653558	.	+	.	ID=gene2403;Dbxref=GeneID:4488465;Name=AHA_2406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2406
NC_008570.1	RefSeq	CDS	2653082	2653558	.	+	0	ID=cds2336;Parent=gene2403;Dbxref=Genbank:YP_856921.1,GeneID:4488465;Name=YP_856921.1;Note=identified by match to protein family HMM PF00255;gbkey=CDS;product=peroxiredoxin HYR1;protein_id=YP_856921.1;transl_table=11
NC_008570.1	RefSeq	gene	2653718	2655103	.	+	.	ID=gene2404;Dbxref=GeneID:4488466;Name=AHA_2407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2407
NC_008570.1	RefSeq	CDS	2653718	2655103	.	+	0	ID=cds2337;Parent=gene2404;Dbxref=Genbank:YP_856922.1,GeneID:4488466;Name=YP_856922.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_856922.1;transl_table=11
NC_008570.1	RefSeq	gene	2655155	2655619	.	-	.	ID=gene2405;Dbxref=GeneID:4488467;Name=AHA_2408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2408
NC_008570.1	RefSeq	CDS	2655155	2655619	.	-	0	ID=cds2338;Parent=gene2405;Dbxref=Genbank:YP_856923.1,GeneID:4488467;Name=YP_856923.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=GMP synthase;protein_id=YP_856923.1;transl_table=11
NC_008570.1	RefSeq	gene	2655637	2656128	.	-	.	ID=gene2406;Dbxref=GeneID:4488468;Name=AHA_2409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2409
NC_008570.1	RefSeq	CDS	2655637	2656128	.	-	0	ID=cds2339;Parent=gene2406;Dbxref=Genbank:YP_856924.1,GeneID:4488468;Name=YP_856924.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856924.1;transl_table=11
NC_008570.1	RefSeq	gene	2656162	2656494	.	-	.	ID=gene2407;Dbxref=GeneID:4488469;Name=AHA_2410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2410
NC_008570.1	RefSeq	CDS	2656162	2656494	.	-	0	ID=cds2340;Parent=gene2407;Dbxref=Genbank:YP_856925.1,GeneID:4488469;Name=YP_856925.1;Note=identified by match to protein family HMM PF02694;gbkey=CDS;product=hypothetical protein;protein_id=YP_856925.1;transl_table=11
NC_008570.1	RefSeq	gene	2656667	2657512	.	-	.	ID=gene2408;Dbxref=GeneID:4488470;Name=AHA_2411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2411
NC_008570.1	RefSeq	CDS	2656667	2657512	.	-	0	ID=cds2341;Parent=gene2408;Dbxref=Genbank:YP_856926.1,GeneID:4488470;Name=YP_856926.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856926.1;transl_table=11
NC_008570.1	RefSeq	gene	2657869	2658441	.	+	.	ID=gene2409;Dbxref=GeneID:4488471;Name=AHA_2412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2412
NC_008570.1	RefSeq	CDS	2657869	2658441	.	+	0	ID=cds2342;Parent=gene2409;Dbxref=Genbank:YP_856927.1,GeneID:4488471;Name=YP_856927.1;Note=identified by match to protein family HMM PF01928%3B match to protein family HMM TIGR00318;gbkey=CDS;product=adenylate cyclase;protein_id=YP_856927.1;transl_table=11
NC_008570.1	RefSeq	gene	2658399	2658830	.	+	.	ID=gene2410;Dbxref=GeneID:4488472;Name=AHA_2413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2413
NC_008570.1	RefSeq	CDS	2658399	2658830	.	+	0	ID=cds2343;Parent=gene2410;Dbxref=Genbank:YP_856928.1,GeneID:4488472;Name=YP_856928.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=nudix family protein%2C MutT subfamily;protein_id=YP_856928.1;transl_table=11
NC_008570.1	RefSeq	gene	2659000	2659506	.	+	.	ID=gene2411;Dbxref=GeneID:4488473;Name=AHA_2414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2414
NC_008570.1	RefSeq	CDS	2659000	2659506	.	+	0	ID=cds2344;Parent=gene2411;Dbxref=Genbank:YP_856929.1,GeneID:4488473;Name=YP_856929.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_856929.1;transl_table=11
NC_008570.1	RefSeq	gene	2659567	2660892	.	+	.	ID=gene2412;Dbxref=GeneID:4488474;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AHA_2415
NC_008570.1	RefSeq	CDS	2659567	2660892	.	+	0	ID=cds2345;Parent=gene2412;Dbxref=Genbank:YP_856930.1,GeneID:4488474;Name=YP_856930.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=YP_856930.1;transl_table=11
NC_008570.1	RefSeq	gene	2661009	2661314	.	+	.	ID=gene2413;Dbxref=GeneID:4488475;Name=AHA_2416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2416
NC_008570.1	RefSeq	CDS	2661009	2661314	.	+	0	ID=cds2346;Parent=gene2413;Dbxref=Genbank:YP_856931.1,GeneID:4488475;Name=YP_856931.1;Note=identified by match to protein family HMM PF03992;gbkey=CDS;product=antibiotic biosynthesis monooxygenase family protein;protein_id=YP_856931.1;transl_table=11
NC_008570.1	RefSeq	gene	2661521	2662384	.	-	.	ID=gene2414;Dbxref=GeneID:4488476;Name=pdxY-2;gbkey=Gene;gene=pdxY-2;gene_biotype=protein_coding;locus_tag=AHA_2417
NC_008570.1	RefSeq	CDS	2661521	2662384	.	-	0	ID=cds2347;Parent=gene2414;Dbxref=Genbank:YP_856932.1,GeneID:4488476;Name=YP_856932.1;Note=identified by similarity to SP:P77150%3B match to protein family HMM TIGR00687;gbkey=CDS;gene=pdxY-2;product=pyridoxal kinase;protein_id=YP_856932.1;transl_table=11
NC_008570.1	RefSeq	gene	2662991	2663746	.	-	.	ID=gene2415;Dbxref=GeneID:4488477;Name=AHA_2418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2418
NC_008570.1	RefSeq	CDS	2662991	2663746	.	-	0	ID=cds2348;Parent=gene2415;Dbxref=Genbank:YP_856933.1,GeneID:4488477;Name=YP_856933.1;Note=identified by similarity to GB:BAA21812.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856933.1;transl_table=11
NC_008570.1	RefSeq	gene	2663825	2664388	.	-	.	ID=gene2416;Dbxref=GeneID:4488478;Name=AHA_2419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2419
NC_008570.1	RefSeq	CDS	2663825	2664388	.	-	0	ID=cds2349;Parent=gene2416;Dbxref=Genbank:YP_856934.1,GeneID:4488478;Name=YP_856934.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856934.1;transl_table=11
NC_008570.1	RefSeq	gene	2664707	2665057	.	+	.	ID=gene2417;Dbxref=GeneID:4488479;Name=AHA_2420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2420
NC_008570.1	RefSeq	CDS	2664707	2665057	.	+	0	ID=cds2350;Parent=gene2417;Dbxref=Genbank:YP_856935.1,GeneID:4488479;Name=YP_856935.1;Note=identified by match to protein family HMM TIGR02809;gbkey=CDS;product=PHA granule-associated protein;protein_id=YP_856935.1;transl_table=11
NC_008570.1	RefSeq	gene	2665151	2666935	.	+	.	ID=gene2418;Dbxref=GeneID:4488480;Name=AHA_2421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2421
NC_008570.1	RefSeq	CDS	2665151	2666935	.	+	0	ID=cds2351;Parent=gene2418;Dbxref=Genbank:YP_856936.1,GeneID:4488480;Name=YP_856936.1;Note=identified by match to protein family HMM PF00561%3B match to protein family HMM PF07167%3B match to protein family HMM TIGR01838;gbkey=CDS;product=poly-beta-hydroxybutyrate polymerase;protein_id=YP_856936.1;transl_table=11
NC_008570.1	RefSeq	gene	2666932	2667336	.	+	.	ID=gene2419;Dbxref=GeneID:4488481;Name=AHA_2422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2422
NC_008570.1	RefSeq	CDS	2666932	2667336	.	+	0	ID=cds2352;Parent=gene2419;Dbxref=Genbank:YP_856937.1,GeneID:4488481;Name=YP_856937.1;Note=identified by match to protein family HMM PF01575;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=YP_856937.1;transl_table=11
NC_008570.1	RefSeq	gene	2667526	2667759	.	+	.	ID=gene2420;Dbxref=GeneID:4486727;Name=AHA_2423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2423
NC_008570.1	RefSeq	CDS	2667526	2667759	.	+	0	ID=cds2353;Parent=gene2420;Dbxref=Genbank:YP_856938.1,GeneID:4486727;Name=YP_856938.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856938.1;transl_table=11
NC_008570.1	RefSeq	gene	2668020	2668556	.	-	.	ID=gene2421;Dbxref=GeneID:4486728;Name=AHA_2424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2424
NC_008570.1	RefSeq	CDS	2668020	2668556	.	-	0	ID=cds2354;Parent=gene2421;Dbxref=Genbank:YP_856939.1,GeneID:4486728;Name=YP_856939.1;Note=identified by similarity to GB:BAC59878.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856939.1;transl_table=11
NC_008570.1	RefSeq	gene	2668644	2670395	.	-	.	ID=gene2422;Dbxref=GeneID:4486729;Name=AHA_2425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2425
NC_008570.1	RefSeq	CDS	2668644	2670395	.	-	0	ID=cds2355;Parent=gene2422;Dbxref=Genbank:YP_856940.1,GeneID:4486729;Name=YP_856940.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=drug efflux ABC transporter ATP-binding and permease subunits;protein_id=YP_856940.1;transl_table=11
NC_008570.1	RefSeq	gene	2670392	2670508	.	-	.	ID=gene2423;Dbxref=GeneID:4486730;Name=AHA_2426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2426
NC_008570.1	RefSeq	CDS	2670392	2670508	.	-	0	ID=cds2356;Parent=gene2423;Dbxref=Genbank:YP_856941.1,GeneID:4486730;Name=YP_856941.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856941.1;transl_table=11
NC_008570.1	RefSeq	gene	2670505	2672241	.	-	.	ID=gene2424;Dbxref=GeneID:4486731;Name=AHA_2427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2427
NC_008570.1	RefSeq	CDS	2670505	2672241	.	-	0	ID=cds2357;Parent=gene2424;Dbxref=Genbank:YP_856942.1,GeneID:4486731;Name=YP_856942.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_856942.1;transl_table=11
NC_008570.1	RefSeq	gene	2672383	2675184	.	-	.	ID=gene2425;Dbxref=GeneID:4486732;Name=AHA_2428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2428
NC_008570.1	RefSeq	CDS	2672383	2675184	.	-	0	ID=cds2358;Parent=gene2425;Dbxref=Genbank:YP_856943.1,GeneID:4486732;Name=YP_856943.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box histidine kinase/response regulator;protein_id=YP_856943.1;transl_table=11
NC_008570.1	RefSeq	gene	2675339	2675767	.	+	.	ID=gene2426;Dbxref=GeneID:4486733;Name=AHA_2429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2429
NC_008570.1	RefSeq	CDS	2675339	2675767	.	+	0	ID=cds2359;Parent=gene2426;Dbxref=Genbank:YP_856944.1,GeneID:4486733;Name=YP_856944.1;Note=identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068;gbkey=CDS;product=thioredoxin 2;protein_id=YP_856944.1;transl_table=11
NC_008570.1	RefSeq	gene	2675933	2677321	.	+	.	ID=gene2427;Dbxref=GeneID:4486734;Name=AHA_2430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2430
NC_008570.1	RefSeq	CDS	2675933	2677321	.	+	0	ID=cds2360;Parent=gene2427;Dbxref=Genbank:YP_856945.1,GeneID:4486734;Name=YP_856945.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00785;gbkey=CDS;product=divalent anion:Na+ symporter (DASS) family protein;protein_id=YP_856945.1;transl_table=11
NC_008570.1	RefSeq	gene	2677574	2680048	.	-	.	ID=gene2428;Dbxref=GeneID:4486735;Name=AHA_2431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2431
NC_008570.1	RefSeq	CDS	2677574	2680048	.	-	0	ID=cds2361;Parent=gene2428;Dbxref=Genbank:YP_856946.1,GeneID:4486735;Name=YP_856946.1;Note=identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02093;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=YP_856946.1;transl_table=11
NC_008570.1	RefSeq	gene	2680434	2680694	.	-	.	ID=gene2429;Dbxref=GeneID:4486736;Name=AHA_2432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2432
NC_008570.1	RefSeq	CDS	2680434	2680694	.	-	0	ID=cds2362;Parent=gene2429;Dbxref=Genbank:YP_856947.1,GeneID:4486736;Name=YP_856947.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856947.1;transl_table=11
NC_008570.1	RefSeq	gene	2680877	2681353	.	+	.	ID=gene2430;Dbxref=GeneID:4486737;Name=AHA_2433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2433
NC_008570.1	RefSeq	CDS	2680877	2681353	.	+	0	ID=cds2363;Parent=gene2430;Dbxref=Genbank:YP_856948.1,GeneID:4486737;Name=YP_856948.1;gbkey=CDS;product=cell division inhibitor;protein_id=YP_856948.1;transl_table=11
NC_008570.1	RefSeq	gene	2681773	2683569	.	-	.	ID=gene2431;Dbxref=GeneID:4486738;Name=AHA_2434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2434
NC_008570.1	RefSeq	CDS	2681773	2683569	.	-	0	ID=cds2364;Parent=gene2431;Dbxref=Genbank:YP_856949.1,GeneID:4486738;Name=YP_856949.1;Note=identified by match to protein family HMM PF05681%3B match to protein family HMM PF05683%3B match to protein family HMM TIGR00722%3B match to protein family HMM TIGR00723;gbkey=CDS;product=fumarate hydratase%2C class I;protein_id=YP_856949.1;transl_table=11
NC_008570.1	RefSeq	gene	2683506	2684879	.	+	.	ID=gene2432;Dbxref=GeneID:4486739;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AHA_2435
NC_008570.1	RefSeq	CDS	2683506	2684879	.	+	0	ID=cds2365;Parent=gene2432;Dbxref=Genbank:YP_856950.1,GeneID:4486739;Name=YP_856950.1;Note=identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00553;gbkey=CDS;gene=pabB;product=para-aminobenzoate synthase%2C component I;protein_id=YP_856950.1;transl_table=11
NC_008570.1	RefSeq	gene	2684927	2685493	.	+	.	ID=gene2433;Dbxref=GeneID:4486740;Name=AHA_2436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2436
NC_008570.1	RefSeq	CDS	2684927	2685493	.	+	0	ID=cds2366;Parent=gene2433;Dbxref=Genbank:YP_856951.1,GeneID:4486740;Name=YP_856951.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_856951.1;transl_table=11
NC_008570.1	RefSeq	gene	2685709	2687007	.	+	.	ID=gene2434;Dbxref=GeneID:4486741;Name=AHA_2437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2437
NC_008570.1	RefSeq	CDS	2685709	2687007	.	+	0	ID=cds2367;Parent=gene2434;Dbxref=Genbank:YP_856952.1,GeneID:4486741;Name=YP_856952.1;Note=identified by similarity to SP:P0AAD6%3B match to protein family HMM PF01490%3B match to protein family HMM PF03222;gbkey=CDS;product=serine transporter family protein;protein_id=YP_856952.1;transl_table=11
NC_008570.1	RefSeq	gene	2687428	2688678	.	-	.	ID=gene2435;Dbxref=GeneID:4486742;Name=AHA_2438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2438
NC_008570.1	RefSeq	CDS	2687428	2688678	.	-	0	ID=cds2368;Parent=gene2435;Dbxref=Genbank:YP_856953.1,GeneID:4486742;Name=YP_856953.1;Note=involved in the import of serine and threonine coupled with the import of sodium;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=YP_856953.1;transl_table=11
NC_008570.1	RefSeq	gene	2689016	2690944	.	+	.	ID=gene2436;Dbxref=GeneID:4486743;Name=AHA_2439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2439
NC_008570.1	RefSeq	CDS	2689016	2690944	.	+	0	ID=cds2369;Parent=gene2436;Dbxref=Genbank:YP_856954.1,GeneID:4486743;Name=YP_856954.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614;gbkey=CDS;product=DNA helicase;protein_id=YP_856954.1;transl_table=11
NC_008570.1	RefSeq	gene	2691510	2693432	.	+	.	ID=gene2437;Dbxref=GeneID:4486744;Name=AHA_2440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2440
NC_008570.1	RefSeq	CDS	2691510	2693432	.	+	0	ID=cds2370;Parent=gene2437;Dbxref=Genbank:YP_856955.1,GeneID:4486744;Name=YP_856955.1;Note=identified by match to protein family HMM PF06798;gbkey=CDS;product=PrkA serine kinase;protein_id=YP_856955.1;transl_table=11
NC_008570.1	RefSeq	gene	2693456	2694727	.	+	.	ID=gene2438;Dbxref=GeneID:4486745;Name=AHA_2441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2441
NC_008570.1	RefSeq	CDS	2693456	2694727	.	+	0	ID=cds2371;Parent=gene2438;Dbxref=Genbank:YP_856956.1,GeneID:4486745;Name=YP_856956.1;Note=identified by match to protein family HMM PF04285;gbkey=CDS;product=hypothetical protein;protein_id=YP_856956.1;transl_table=11
NC_008570.1	RefSeq	gene	2694738	2696255	.	+	.	ID=gene2439;Dbxref=GeneID:4489308;Name=AHA_2442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2442
NC_008570.1	RefSeq	CDS	2694738	2696255	.	+	0	ID=cds2372;Parent=gene2439;Dbxref=Genbank:YP_856957.1,GeneID:4489308;Name=YP_856957.1;Note=identified by match to protein family HMM PF04293;gbkey=CDS;product=SpoVR family protein;protein_id=YP_856957.1;transl_table=11
NC_008570.1	RefSeq	gene	2696320	2697033	.	-	.	ID=gene2440;Dbxref=GeneID:4489309;Name=AHA_2443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2443
NC_008570.1	RefSeq	CDS	2696320	2697033	.	-	0	ID=cds2373;Parent=gene2440;Dbxref=Genbank:YP_856958.1,GeneID:4489309;Name=YP_856958.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator;protein_id=YP_856958.1;transl_table=11
NC_008570.1	RefSeq	gene	2697368	2698948	.	+	.	ID=gene2441;Dbxref=GeneID:4489310;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AHA_2444
NC_008570.1	RefSeq	CDS	2697368	2698948	.	+	0	ID=cds2374;Parent=gene2441;Dbxref=Genbank:YP_856959.1,GeneID:4489310;Name=YP_856959.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;product=sodium/proton antiporter;protein_id=YP_856959.1;transl_table=11
NC_008570.1	RefSeq	gene	2699034	2699555	.	+	.	ID=gene2442;Dbxref=GeneID:4489311;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AHA_2445
NC_008570.1	RefSeq	CDS	2699034	2699555	.	+	0	ID=cds2375;Parent=gene2442;Dbxref=Genbank:YP_856960.1,GeneID:4489311;Name=YP_856960.1;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;gbkey=CDS;gene=dsbB;product=disulfide bond formation protein B;protein_id=YP_856960.1;transl_table=11
NC_008570.1	RefSeq	gene	2699642	2700295	.	-	.	ID=gene2443;Dbxref=GeneID:4489312;Name=AHA_2446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2446
NC_008570.1	RefSeq	CDS	2699642	2700295	.	-	0	ID=cds2376;Parent=gene2443;Dbxref=Genbank:YP_856961.1,GeneID:4489312;Name=YP_856961.1;gbkey=CDS;product=DedA protein;protein_id=YP_856961.1;transl_table=11
NC_008570.1	RefSeq	gene	2700453	2700722	.	-	.	ID=gene2444;Dbxref=GeneID:4489313;Name=AHA_2447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2447
NC_008570.1	RefSeq	CDS	2700453	2700722	.	-	0	ID=cds2377;Parent=gene2444;Dbxref=Genbank:YP_856962.1,GeneID:4489313;Name=YP_856962.1;Note=identified by match to protein family HMM PF06803;gbkey=CDS;product=hypothetical protein;protein_id=YP_856962.1;transl_table=11
NC_008570.1	RefSeq	gene	2700719	2702731	.	-	.	ID=gene2445;Dbxref=GeneID:4489314;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AHA_2448
NC_008570.1	RefSeq	CDS	2700719	2702731	.	-	0	ID=cds2378;Parent=gene2445;Dbxref=Genbank:YP_856963.1,GeneID:4489314;Name=YP_856963.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=YP_856963.1;transl_table=11
NC_008570.1	RefSeq	gene	2702867	2702942	.	+	.	ID=gene2446;Dbxref=GeneID:4489315;Name=AHA_2449;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2449
NC_008570.1	RefSeq	tRNA	2702867	2702942	.	+	.	ID=rna64;Parent=gene2446;Dbxref=GeneID:4489315;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	exon	2702867	2702942	.	+	.	ID=id65;Parent=rna64;Dbxref=GeneID:4489315;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	gene	2703718	2705403	.	+	.	ID=gene2447;Dbxref=GeneID:4489316;Name=AHA_2450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2450
NC_008570.1	RefSeq	CDS	2703718	2705403	.	+	0	ID=cds2379;Parent=gene2447;Dbxref=Genbank:YP_856964.1,GeneID:4489316;Name=YP_856964.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF06826%3B match to protein family HMM TIGR01625;gbkey=CDS;product=hypothetical protein;protein_id=YP_856964.1;transl_table=11
NC_008570.1	RefSeq	gene	2705621	2707153	.	+	.	ID=gene2448;Dbxref=GeneID:4489317;Name=AHA_2451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2451
NC_008570.1	RefSeq	CDS	2705621	2707153	.	+	0	ID=cds2380;Parent=gene2448;Dbxref=Genbank:YP_856965.1,GeneID:4489317;Name=YP_856965.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=lytic transglycosylase%2C catalytic;protein_id=YP_856965.1;transl_table=11
NC_008570.1	RefSeq	gene	2707384	2708349	.	+	.	ID=gene2449;Dbxref=GeneID:4489318;Name=AHA_2452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2452
NC_008570.1	RefSeq	CDS	2707384	2708349	.	+	0	ID=cds2381;Parent=gene2449;Dbxref=Genbank:YP_856966.1,GeneID:4489318;Name=YP_856966.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;product=hypothetical protein;protein_id=YP_856966.1;transl_table=11
NC_008570.1	RefSeq	gene	2708392	2708853	.	+	.	ID=gene2450;Dbxref=GeneID:4489319;Name=AHA_2453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2453
NC_008570.1	RefSeq	CDS	2708392	2708853	.	+	0	ID=cds2382;Parent=gene2450;Dbxref=Genbank:YP_856967.1,GeneID:4489319;Name=YP_856967.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856967.1;transl_table=11
NC_008570.1	RefSeq	gene	2708863	2710395	.	+	.	ID=gene2451;Dbxref=GeneID:4489320;Name=AHA_2454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2454
NC_008570.1	RefSeq	CDS	2708863	2710395	.	+	0	ID=cds2383;Parent=gene2451;Dbxref=Genbank:YP_856968.1,GeneID:4489320;Name=YP_856968.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;product=TctA protein;protein_id=YP_856968.1;transl_table=11
NC_008570.1	RefSeq	gene	2710474	2711139	.	-	.	ID=gene2452;Dbxref=GeneID:4489321;Name=AHA_2455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2455
NC_008570.1	RefSeq	CDS	2710474	2711139	.	-	0	ID=cds2384;Parent=gene2452;Dbxref=Genbank:YP_856969.1,GeneID:4489321;Name=YP_856969.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=transcriptional regulatory protein CitT;protein_id=YP_856969.1;transl_table=11
NC_008570.1	RefSeq	gene	2711140	2712723	.	-	.	ID=gene2453;Dbxref=GeneID:4489322;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AHA_2456
NC_008570.1	RefSeq	CDS	2711140	2712723	.	-	0	ID=cds2385;Parent=gene2453;Dbxref=Genbank:YP_856970.1,GeneID:4489322;Name=YP_856970.1;Note=identified by similarity to SP:P77510%3B match to protein family HMM PF02518;gbkey=CDS;gene=dpiB;product=sensor histidine kinase DpiB;protein_id=YP_856970.1;transl_table=11
NC_008570.1	RefSeq	gene	2712720	2713955	.	-	.	ID=gene2454;Dbxref=GeneID:4489323;Name=AHA_2457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2457
NC_008570.1	RefSeq	CDS	2712720	2713955	.	-	0	ID=cds2386;Parent=gene2454;Dbxref=Genbank:YP_856971.1,GeneID:4489323;Name=YP_856971.1;Note=identified by match to protein family HMM PF00480;gbkey=CDS;product=Mlc protein;protein_id=YP_856971.1;transl_table=11
NC_008570.1	RefSeq	gene	2714063	2715730	.	-	.	ID=gene2455;Dbxref=GeneID:4489324;Name=AHA_2458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2458
NC_008570.1	RefSeq	CDS	2714063	2715730	.	-	0	ID=cds2387;Parent=gene2455;Dbxref=Genbank:YP_856972.1,GeneID:4489324;Name=YP_856972.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_856972.1;transl_table=11
NC_008570.1	RefSeq	gene	2715742	2716317	.	+	.	ID=gene2456;Dbxref=GeneID:4489325;Name=AHA_2459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2459
NC_008570.1	RefSeq	CDS	2715742	2716317	.	+	0	ID=cds2388;Parent=gene2456;Dbxref=Genbank:YP_856973.1,GeneID:4489325;Name=YP_856973.1;Note=identified by match to protein family HMM PF02810;gbkey=CDS;product=SecC motif-containing protein;protein_id=YP_856973.1;transl_table=11
NC_008570.1	RefSeq	gene	2716511	2718190	.	+	.	ID=gene2457;Dbxref=GeneID:4489326;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AHA_2460
NC_008570.1	RefSeq	CDS	2716511	2718190	.	+	0	ID=cds2389;Parent=gene2457;Dbxref=Genbank:YP_856974.1,GeneID:4489326;Name=YP_856974.1;Note=anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor;gbkey=CDS;gene=glpA;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=YP_856974.1;transl_table=11
NC_008570.1	RefSeq	gene	2718180	2719460	.	+	.	ID=gene2458;Dbxref=GeneID:4489327;Name=AHA_2461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2461
NC_008570.1	RefSeq	CDS	2718180	2719460	.	+	0	ID=cds2390;Parent=gene2458;Dbxref=Genbank:YP_856975.1,GeneID:4489327;Name=YP_856975.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=YP_856975.1;transl_table=11
NC_008570.1	RefSeq	gene	2719512	2720714	.	+	.	ID=gene2459;Dbxref=GeneID:4488084;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AHA_2462
NC_008570.1	RefSeq	CDS	2719512	2720714	.	+	0	ID=cds2391;Parent=gene2459;Dbxref=Genbank:YP_856976.1,GeneID:4488084;Name=YP_856976.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=YP_856976.1;transl_table=11
NC_008570.1	RefSeq	gene	2720802	2731490	.	-	.	ID=gene2460;Dbxref=GeneID:4488085;Name=AHA_2463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2463
NC_008570.1	RefSeq	CDS	2720802	2731490	.	-	0	ID=cds2392;Parent=gene2460;Dbxref=Genbank:YP_856977.1,GeneID:4488085;Name=YP_856977.1;Note=identified by match to protein family HMM PF00353%3B match to protein family HMM TIGR01965;gbkey=CDS;product=type I secretion target GGXGXDXXX repeat-containing protein;protein_id=YP_856977.1;transl_table=11
NC_008570.1	RefSeq	gene	2732209	2733654	.	+	.	ID=gene2461;Dbxref=GeneID:4488086;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AHA_2464
NC_008570.1	RefSeq	CDS	2732209	2733654	.	+	0	ID=cds2393;Parent=gene2461;Dbxref=Genbank:YP_856978.1,GeneID:4488086;Name=YP_856978.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;product=cytochrome c552;protein_id=YP_856978.1;transl_table=11
NC_008570.1	RefSeq	gene	2733706	2734320	.	+	.	ID=gene2462;Dbxref=GeneID:4488087;Name=AHA_2465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2465
NC_008570.1	RefSeq	CDS	2733706	2734320	.	+	0	ID=cds2394;Parent=gene2462;Dbxref=Genbank:YP_856979.1,GeneID:4488087;Name=YP_856979.1;gbkey=CDS;product=cytochrome c-type protein NrfB;protein_id=YP_856979.1;transl_table=11
NC_008570.1	RefSeq	gene	2734317	2735009	.	+	.	ID=gene2463;Dbxref=GeneID:4488088;Name=AHA_2466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2466
NC_008570.1	RefSeq	CDS	2734317	2735009	.	+	0	ID=cds2395;Parent=gene2463;Dbxref=Genbank:YP_856980.1,GeneID:4488088;Name=YP_856980.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01409;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=YP_856980.1;transl_table=11
NC_008570.1	RefSeq	gene	2735006	2735962	.	+	.	ID=gene2464;Dbxref=GeneID:4488089;Name=AHA_2467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2467
NC_008570.1	RefSeq	CDS	2735006	2735962	.	+	0	ID=cds2396;Parent=gene2464;Dbxref=Genbank:YP_856981.1,GeneID:4488089;Name=YP_856981.1;Note=identified by match to protein family HMM PF03916;gbkey=CDS;product=protein NrfD;protein_id=YP_856981.1;transl_table=11
NC_008570.1	RefSeq	gene	2736112	2738073	.	+	.	ID=gene2465;Dbxref=GeneID:4488090;Name=ccmF-2;gbkey=Gene;gene=ccmF-2;gene_biotype=protein_coding;locus_tag=AHA_2468
NC_008570.1	RefSeq	CDS	2736112	2738073	.	+	0	ID=cds2397;Parent=gene2465;Dbxref=Genbank:YP_856982.1,GeneID:4488090;Name=YP_856982.1;Note=identified by match to protein family HMM PF01578%3B match to protein family HMM TIGR00353;gbkey=CDS;gene=ccmF-2;product=cytochrome c-type biogenesis protein CcmF;protein_id=YP_856982.1;transl_table=11
NC_008570.1	RefSeq	gene	2738070	2738669	.	+	.	ID=gene2466;Dbxref=GeneID:4488091;Name=AHA_2469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2469
NC_008570.1	RefSeq	CDS	2738070	2738669	.	+	0	ID=cds2398;Parent=gene2466;Dbxref=Genbank:YP_856983.1,GeneID:4488091;Name=YP_856983.1;Note=identified by match to protein family HMM TIGR00385;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=YP_856983.1;transl_table=11
NC_008570.1	RefSeq	gene	2738666	2739856	.	+	.	ID=gene2467;Dbxref=GeneID:4488092;Name=AHA_2470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2470
NC_008570.1	RefSeq	CDS	2738666	2739856	.	+	0	ID=cds2399;Parent=gene2467;Dbxref=Genbank:YP_856984.1,GeneID:4488092;Name=YP_856984.1;Note=identified by match to protein family HMM PF03918;gbkey=CDS;product=formate-dependent nitrite reductase complex subunit NrfF;protein_id=YP_856984.1;transl_table=11
NC_008570.1	RefSeq	gene	2739994	2740449	.	+	.	ID=gene2468;Dbxref=GeneID:4488093;Name=AHA_2471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2471
NC_008570.1	RefSeq	CDS	2739994	2740449	.	+	0	ID=cds2400;Parent=gene2468;Dbxref=Genbank:YP_856985.1,GeneID:4488093;Name=YP_856985.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_856985.1;transl_table=11
NC_008570.1	RefSeq	gene	2740852	2741772	.	+	.	ID=gene2469;Dbxref=GeneID:4488094;Name=AHA_2472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2472
NC_008570.1	RefSeq	CDS	2740852	2741772	.	+	0	ID=cds2401;Parent=gene2469;Dbxref=Genbank:YP_856986.1,GeneID:4488094;Name=YP_856986.1;Note=identified by match to protein family HMM PF00768;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_856986.1;transl_table=11
NC_008570.1	RefSeq	gene	2741866	2743416	.	-	.	ID=gene2470;Dbxref=GeneID:4488095;Name=AHA_2473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2473
NC_008570.1	RefSeq	CDS	2741866	2743416	.	-	0	ID=cds2402;Parent=gene2470;Dbxref=Genbank:YP_856987.1,GeneID:4488095;Name=YP_856987.1;Note=identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01733;gbkey=CDS;product=dimodular nonribosomal peptide synthetase;protein_id=YP_856987.1;transl_table=11
NC_008570.1	RefSeq	gene	2743413	2749607	.	-	.	ID=gene2471;Dbxref=GeneID:4488096;Name=AHA_2474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2474
NC_008570.1	RefSeq	CDS	2743413	2749607	.	-	0	ID=cds2403;Parent=gene2471;Dbxref=Genbank:YP_856988.1,GeneID:4488096;Name=YP_856988.1;Note=identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM TIGR01720%3B match to protein family HMM TIGR01733;gbkey=CDS;product=nonribosomal peptide synthetase;protein_id=YP_856988.1;transl_table=11
NC_008570.1	RefSeq	gene	2749724	2750473	.	-	.	ID=gene2472;Dbxref=GeneID:4488097;Name=AHA_2475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2475
NC_008570.1	RefSeq	CDS	2749724	2750473	.	-	0	ID=cds2404;Parent=gene2472;Dbxref=Genbank:YP_856989.1,GeneID:4488097;Name=YP_856989.1;Note=catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin;gbkey=CDS;product=2%2C3-dihydroxybenzoate-2%2C3-dehydrogenase;protein_id=YP_856989.1;transl_table=11
NC_008570.1	RefSeq	gene	2750503	2753604	.	-	.	ID=gene2473;Dbxref=GeneID:4488098;Name=AHA_2476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2476
NC_008570.1	RefSeq	CDS	2750503	2753604	.	-	0	ID=cds2405;Parent=gene2473;Dbxref=Genbank:YP_856990.1,GeneID:4488098;Name=YP_856990.1;Note=identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM TIGR01733;gbkey=CDS;product=nonribosomal peptide synthetase;protein_id=YP_856990.1;transl_table=11
NC_008570.1	RefSeq	gene	2753601	2754524	.	-	.	ID=gene2474;Dbxref=GeneID:4488099;Name=AHA_2477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2477
NC_008570.1	RefSeq	CDS	2753601	2754524	.	-	0	ID=cds2406;Parent=gene2474;Dbxref=Genbank:YP_856991.1,GeneID:4488099;Name=YP_856991.1;Note=identified by similarity to SP:P15048%3B match to protein family HMM PF00550%3B match to protein family HMM PF00857;gbkey=CDS;product=isochorismatase;protein_id=YP_856991.1;transl_table=11
NC_008570.1	RefSeq	gene	2754548	2756209	.	-	.	ID=gene2475;Dbxref=GeneID:4488100;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AHA_2478
NC_008570.1	RefSeq	CDS	2754548	2756209	.	-	0	ID=cds2407;Parent=gene2475;Dbxref=Genbank:YP_856992.1,GeneID:4488100;Name=YP_856992.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;product=enterobactin synthase subunit E;protein_id=YP_856992.1;transl_table=11
NC_008570.1	RefSeq	gene	2756286	2757479	.	-	.	ID=gene2476;Dbxref=GeneID:4488101;Name=AHA_2479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2479
NC_008570.1	RefSeq	CDS	2756286	2757479	.	-	0	ID=cds2408;Parent=gene2476;Dbxref=Genbank:YP_856993.1,GeneID:4488101;Name=YP_856993.1;Note=identified by similarity to SP:P10377%3B match to protein family HMM PF00425%3B match to protein family HMM TIGR00543;gbkey=CDS;product=isochorismate synthase;protein_id=YP_856993.1;transl_table=11
NC_008570.1	RefSeq	gene	2757805	2758356	.	+	.	ID=gene2477;Dbxref=GeneID:4488102;Name=AHA_2480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2480
NC_008570.1	RefSeq	CDS	2757805	2758356	.	+	0	ID=cds2409;Parent=gene2477;Dbxref=Genbank:YP_856994.1,GeneID:4488102;Name=YP_856994.1;Note=identified by match to protein family HMM PF07273;gbkey=CDS;product=hypothetical protein;protein_id=YP_856994.1;transl_table=11
NC_008570.1	RefSeq	gene	2758502	2760502	.	+	.	ID=gene2478;Dbxref=GeneID:4490782;Name=AHA_2481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2481
NC_008570.1	RefSeq	CDS	2758502	2760502	.	+	0	ID=cds2410;Parent=gene2478;Dbxref=Genbank:YP_856995.1,GeneID:4490782;Name=YP_856995.1;Note=identified by similarity to GB:CAG22906.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856995.1;transl_table=11
NC_008570.1	RefSeq	gene	2760580	2761854	.	-	.	ID=gene2479;Dbxref=GeneID:4490783;Name=glgC-1;gbkey=Gene;gene=glgC-1;gene_biotype=protein_coding;locus_tag=AHA_2482
NC_008570.1	RefSeq	CDS	2760580	2761854	.	-	0	ID=cds2411;Parent=gene2479;Dbxref=Genbank:YP_856996.1,GeneID:4490783;Name=YP_856996.1;Note=identified by similarity to SP:P05415%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR02091;gbkey=CDS;gene=glgC-1;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_856996.1;transl_table=11
NC_008570.1	RefSeq	gene	2762043	2763683	.	+	.	ID=gene2480;Dbxref=GeneID:4490784;Name=AHA_2484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2484
NC_008570.1	RefSeq	CDS	2762043	2763683	.	+	0	ID=cds2412;Parent=gene2480;Dbxref=Genbank:YP_856997.1,GeneID:4490784;Name=YP_856997.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990;gbkey=CDS;product=GGDEF/eal domain-containing protein;protein_id=YP_856997.1;transl_table=11
NC_008570.1	RefSeq	gene	2763646	2764140	.	-	.	ID=gene2481;Dbxref=GeneID:4490785;Name=AHA_2483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2483
NC_008570.1	RefSeq	CDS	2763646	2764140	.	-	0	ID=cds2413;Parent=gene2481;Dbxref=Genbank:YP_856998.1,GeneID:4490785;Name=YP_856998.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856998.1;transl_table=11
NC_008570.1	RefSeq	gene	2764309	2764671	.	-	.	ID=gene2482;Dbxref=GeneID:4490786;Name=AHA_2485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2485
NC_008570.1	RefSeq	CDS	2764309	2764671	.	-	0	ID=cds2414;Parent=gene2482;Dbxref=Genbank:YP_856999.1,GeneID:4490786;Name=YP_856999.1;Note=identified by similarity to GB:BAC94307.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_856999.1;transl_table=11
NC_008570.1	RefSeq	gene	2764858	2766162	.	-	.	ID=gene2483;Dbxref=GeneID:4490787;Name=AHA_2486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2486
NC_008570.1	RefSeq	CDS	2764858	2766162	.	-	0	ID=cds2415;Parent=gene2483;Dbxref=Genbank:YP_857000.1,GeneID:4490787;Name=YP_857000.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=inosine-guanosine kinase;protein_id=YP_857000.1;transl_table=11
NC_008570.1	RefSeq	gene	2766342	2766734	.	-	.	ID=gene2484;Dbxref=GeneID:4490788;Name=AHA_2487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2487
NC_008570.1	RefSeq	CDS	2766342	2766734	.	-	0	ID=cds2416;Parent=gene2484;Dbxref=Genbank:YP_857001.1,GeneID:4490788;Name=YP_857001.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857001.1;transl_table=11
NC_008570.1	RefSeq	gene	2766807	2767832	.	-	.	ID=gene2485;Dbxref=GeneID:4490789;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AHA_2488
NC_008570.1	RefSeq	CDS	2766807	2767832	.	-	0	ID=cds2417;Parent=gene2485;Dbxref=Genbank:YP_857002.1,GeneID:4490789;Name=YP_857002.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=YP_857002.1;transl_table=11
NC_008570.1	RefSeq	gene	2767896	2768540	.	-	.	ID=gene2486;Dbxref=GeneID:4490790;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AHA_2489
NC_008570.1	RefSeq	CDS	2767896	2768540	.	-	0	ID=cds2418;Parent=gene2486;Dbxref=Genbank:YP_857003.1,GeneID:4490790;Name=YP_857003.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=YP_857003.1;transl_table=11
NC_008570.1	RefSeq	gene	2768795	2770720	.	-	.	ID=gene2487;Dbxref=GeneID:4490791;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AHA_2490
NC_008570.1	RefSeq	CDS	2768795	2770720	.	-	0	ID=cds2419;Parent=gene2487;Dbxref=Genbank:YP_857004.1,GeneID:4490791;Name=YP_857004.1;Note=molecular chaperone;gbkey=CDS;gene=htpG;product=heat shock protein 90;protein_id=YP_857004.1;transl_table=11
NC_008570.1	RefSeq	gene	2770954	2771556	.	-	.	ID=gene2488;Dbxref=GeneID:4490792;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AHA_2491
NC_008570.1	RefSeq	CDS	2770954	2771556	.	-	0	ID=cds2420;Parent=gene2488;Dbxref=Genbank:YP_857005.1,GeneID:4490792;Name=YP_857005.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=YP_857005.1;transl_table=11
NC_008570.1	RefSeq	gene	2771682	2772539	.	-	.	ID=gene2489;Dbxref=GeneID:4490793;Name=fdhD-2;gbkey=Gene;gene=fdhD-2;gene_biotype=protein_coding;locus_tag=AHA_2492
NC_008570.1	RefSeq	CDS	2771682	2772539	.	-	0	ID=cds2421;Parent=gene2489;Dbxref=Genbank:YP_857006.1,GeneID:4490793;Name=YP_857006.1;Note=identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129;gbkey=CDS;gene=fdhD-2;product=formate dehydrogenase family accessory protein FdhD;protein_id=YP_857006.1;transl_table=11
NC_008570.1	RefSeq	gene	2772551	2774680	.	-	.	ID=gene2490;Dbxref=GeneID:4490794;Name=AHA_2493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2493
NC_008570.1	RefSeq	CDS	2772551	2774680	.	-	0	ID=cds2422;Parent=gene2490;Dbxref=Genbank:YP_857007.1,GeneID:4490794;Name=YP_857007.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954;gbkey=CDS;product=formate hydrogenlyase transcriptional activator;protein_id=YP_857007.1;transl_table=11
NC_008570.1	RefSeq	gene	2775035	2775433	.	-	.	ID=gene2491;Dbxref=GeneID:4490795;Name=AHA_2494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2494
NC_008570.1	RefSeq	CDS	2775035	2775433	.	-	0	ID=cds2423;Parent=gene2491;Dbxref=Genbank:YP_857008.1,GeneID:4490795;Name=YP_857008.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857008.1;transl_table=11
NC_008570.1	RefSeq	gene	2775515	2777659	.	-	.	ID=gene2492;Dbxref=GeneID:4490796;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=AHA_2495
NC_008570.1	RefSeq	CDS	2775515	2777659	.	-	0	ID=cds2424;Parent=gene2492;Dbxref=Genbank:YP_857009.1,GeneID:4490796;Name=YP_857009.1;Note=Selenoprotein. identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591;gbkey=CDS;gene=fdhA;product=formate dehydrogenase subunit alpha;protein_id=YP_857009.1;transl_except=(pos:complement(2777240..2777242)%2Caa:Sec);transl_table=11
NC_008570.1	RefSeq	gene	2777706	2778305	.	-	.	ID=gene2493;Dbxref=GeneID:4490797;Name=AHA_2496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2496
NC_008570.1	RefSeq	CDS	2777706	2778305	.	-	0	ID=cds2425;Parent=gene2493;Dbxref=Genbank:YP_857010.1,GeneID:4490797;Name=YP_857010.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_857010.1;transl_table=11
NC_008570.1	RefSeq	gene	2779070	2780818	.	+	.	ID=gene2494;Dbxref=GeneID:4490798;Name=AHA_2497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2497
NC_008570.1	RefSeq	CDS	2779070	2780818	.	+	0	ID=cds2426;Parent=gene2494;Dbxref=Genbank:YP_857011.1,GeneID:4490798;Name=YP_857011.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857011.1;transl_table=11
NC_008570.1	RefSeq	gene	2781291	2783159	.	+	.	ID=gene2495;Dbxref=GeneID:4490799;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=AHA_2498
NC_008570.1	RefSeq	CDS	2781291	2783159	.	+	0	ID=cds2427;Parent=gene2495;Dbxref=Genbank:YP_857012.1,GeneID:4490799;Name=YP_857012.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=potassium transport protein Kup;protein_id=YP_857012.1;transl_table=11
NC_008570.1	RefSeq	gene	2783748	2784413	.	+	.	ID=gene2496;Dbxref=GeneID:4490800;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AHA_2499
NC_008570.1	RefSeq	CDS	2783748	2784413	.	+	0	ID=cds2428;Parent=gene2496;Dbxref=Genbank:YP_857013.1,GeneID:4490800;Name=YP_857013.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;gene=hyfA;product=hydrogenase-4 subunit A;protein_id=YP_857013.1;transl_table=11
NC_008570.1	RefSeq	gene	2784413	2786284	.	+	.	ID=gene2497;Dbxref=GeneID:4490801;Name=AHA_2500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2500
NC_008570.1	RefSeq	CDS	2784413	2786284	.	+	0	ID=cds2429;Parent=gene2497;Dbxref=Genbank:YP_857014.1,GeneID:4490801;Name=YP_857014.1;Note=identified by match to protein family HMM PF00361;gbkey=CDS;product=hydrogenase 4 subunit B;protein_id=YP_857014.1;transl_table=11
NC_008570.1	RefSeq	gene	2786286	2787239	.	+	.	ID=gene2498;Dbxref=GeneID:4488295;Name=AHA_2501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2501
NC_008570.1	RefSeq	CDS	2786286	2787239	.	+	0	ID=cds2430;Parent=gene2498;Dbxref=Genbank:YP_857015.1,GeneID:4488295;Name=YP_857015.1;Note=identified by match to protein family HMM PF00146;gbkey=CDS;product=hydrogenase-4 subunit C;protein_id=YP_857015.1;transl_table=11
NC_008570.1	RefSeq	gene	2787320	2789038	.	+	.	ID=gene2499;Dbxref=GeneID:4488296;Name=AHA_2502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2502
NC_008570.1	RefSeq	CDS	2787320	2789038	.	+	0	ID=cds2431;Parent=gene2499;Dbxref=Genbank:YP_857016.1,GeneID:4488296;Name=YP_857016.1;Note=identified by match to protein family HMM PF00329%3B match to protein family HMM PF00346;gbkey=CDS;product=hydrogenase-4 subunit G;protein_id=YP_857016.1;transl_table=11
NC_008570.1	RefSeq	gene	2789048	2789605	.	+	.	ID=gene2500;Dbxref=GeneID:4488297;Name=AHA_2503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2503
NC_008570.1	RefSeq	CDS	2789048	2789605	.	+	0	ID=cds2432;Parent=gene2500;Dbxref=Genbank:YP_857017.1,GeneID:4488297;Name=YP_857017.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=hydrogenase-4 component H;protein_id=YP_857017.1;transl_table=11
NC_008570.1	RefSeq	gene	2789605	2790420	.	+	.	ID=gene2501;Dbxref=GeneID:4488298;Name=AHA_2504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2504
NC_008570.1	RefSeq	CDS	2789605	2790420	.	+	0	ID=cds2433;Parent=gene2501;Dbxref=Genbank:YP_857018.1,GeneID:4488298;Name=YP_857018.1;Note=identified by match to protein family HMM PF01058;gbkey=CDS;product=hydrogenase-4 subunit I;protein_id=YP_857018.1;transl_table=11
NC_008570.1	RefSeq	gene	2790413	2790826	.	+	.	ID=gene2502;Dbxref=GeneID:4488299;Name=AHA_2505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2505
NC_008570.1	RefSeq	CDS	2790413	2790826	.	+	0	ID=cds2434;Parent=gene2502;Dbxref=Genbank:YP_857019.1,GeneID:4488299;Name=YP_857019.1;gbkey=CDS;product=formate hydrogenlyase maturation protein HycH;protein_id=YP_857019.1;transl_table=11
NC_008570.1	RefSeq	gene	2790826	2791335	.	+	.	ID=gene2503;Dbxref=GeneID:4488300;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AHA_2506
NC_008570.1	RefSeq	CDS	2790826	2791335	.	+	0	ID=cds2435;Parent=gene2503;Dbxref=Genbank:YP_857020.1,GeneID:4488300;Name=YP_857020.1;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;gbkey=CDS;gene=hycI;product=hydrogenase 3 maturation protease;protein_id=YP_857020.1;transl_table=11
NC_008570.1	RefSeq	gene	2791529	2791616	.	+	.	ID=gene2504;Dbxref=GeneID:4488301;Name=AHA_2507;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2507
NC_008570.1	RefSeq	tRNA	2791529	2791616	.	+	.	ID=rna65;Parent=gene2504;Dbxref=GeneID:4488301;gbkey=tRNA;product=tRNA-Sec
NC_008570.1	RefSeq	exon	2791529	2791616	.	+	.	ID=id66;Parent=rna65;Dbxref=GeneID:4488301;gbkey=tRNA;product=tRNA-Sec
NC_008570.1	RefSeq	gene	2791890	2793326	.	+	.	ID=gene2505;Dbxref=GeneID:4488302;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AHA_2508
NC_008570.1	RefSeq	CDS	2791890	2793326	.	+	0	ID=cds2436;Parent=gene2505;Dbxref=Genbank:YP_857021.1,GeneID:4488302;Name=YP_857021.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;gene=selA;product=selenocysteine synthase;protein_id=YP_857021.1;transl_table=11
NC_008570.1	RefSeq	gene	2793331	2795214	.	+	.	ID=gene2506;Dbxref=GeneID:4488303;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AHA_2509
NC_008570.1	RefSeq	CDS	2793331	2795214	.	+	0	ID=cds2437;Parent=gene2506;Dbxref=Genbank:YP_857022.1,GeneID:4488303;Name=YP_857022.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00475;gbkey=CDS;gene=selB;product=selenocysteine-specific translation elongation factor;protein_id=YP_857022.1;transl_table=11
NC_008570.1	RefSeq	gene	2795211	2797649	.	+	.	ID=gene2507;Dbxref=GeneID:4488304;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AHA_2510
NC_008570.1	RefSeq	CDS	2795211	2797649	.	+	0	ID=cds2438;Parent=gene2507;Dbxref=Genbank:YP_857023.1,GeneID:4488304;Name=YP_857023.1;Note=identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143;gbkey=CDS;gene=hypF;product=[NiFe] hydrogenase maturation protein HypF;protein_id=YP_857023.1;transl_table=11
NC_008570.1	RefSeq	gene	2797655	2797906	.	+	.	ID=gene2508;Dbxref=GeneID:4488305;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AHA_2511
NC_008570.1	RefSeq	CDS	2797655	2797906	.	+	0	ID=cds2439;Parent=gene2508;Dbxref=Genbank:YP_857024.1,GeneID:4488305;Name=YP_857024.1;Note=identified by match to protein family HMM PF01455%3B match to protein family HMM TIGR00074;gbkey=CDS;gene=hypC;product=hydrogenase assembly chaperone HypC/HupF;protein_id=YP_857024.1;transl_table=11
NC_008570.1	RefSeq	gene	2797900	2799018	.	+	.	ID=gene2509;Dbxref=GeneID:4488306;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AHA_2512
NC_008570.1	RefSeq	CDS	2797900	2799018	.	+	0	ID=cds2440;Parent=gene2509;Dbxref=Genbank:YP_857025.1,GeneID:4488306;Name=YP_857025.1;Note=identified by match to protein family HMM PF01924%3B match to protein family HMM TIGR00075;gbkey=CDS;gene=hypD;product=hydrogenase expression/formation protein HypD;protein_id=YP_857025.1;transl_table=11
NC_008570.1	RefSeq	gene	2799015	2800019	.	+	.	ID=gene2510;Dbxref=GeneID:4488307;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AHA_2513
NC_008570.1	RefSeq	CDS	2799015	2800019	.	+	0	ID=cds2441;Parent=gene2510;Dbxref=Genbank:YP_857026.1,GeneID:4488307;Name=YP_857026.1;Note=identified by similarity to SP:P40595%3B match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124;gbkey=CDS;gene=hypE;product=hydrogenase expression/formation protein HypE;protein_id=YP_857026.1;transl_table=11
NC_008570.1	RefSeq	gene	2800089	2800430	.	+	.	ID=gene2511;Dbxref=GeneID:4488308;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AHA_2514
NC_008570.1	RefSeq	CDS	2800089	2800430	.	+	0	ID=cds2442;Parent=gene2511;Dbxref=Genbank:YP_857027.1,GeneID:4488308;Name=YP_857027.1;Note=identified by match to protein family HMM PF01155%3B match to protein family HMM TIGR00100;gbkey=CDS;gene=hypA;product=hydrogenase nickel incorporation protein HypA;protein_id=YP_857027.1;transl_table=11
NC_008570.1	RefSeq	gene	2800432	2801523	.	+	.	ID=gene2512;Dbxref=GeneID:4488309;Name=AHA_2515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2515
NC_008570.1	RefSeq	CDS	2800432	2801523	.	+	0	ID=cds2443;Parent=gene2512;Dbxref=Genbank:YP_857028.1,GeneID:4488309;Name=YP_857028.1;Note=identified by match to protein family HMM PF02492%3B match to protein family HMM TIGR00073;gbkey=CDS;product=hydrogenase nickel incorporation protein HypB;protein_id=YP_857028.1;transl_table=11
NC_008570.1	RefSeq	gene	2801859	2802500	.	-	.	ID=gene2513;Dbxref=GeneID:4488310;Name=AHA_2516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2516
NC_008570.1	RefSeq	CDS	2801859	2802500	.	-	0	ID=cds2444;Parent=gene2513;Dbxref=Genbank:YP_857029.1,GeneID:4488310;Name=YP_857029.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ATPase DppE;protein_id=YP_857029.1;transl_table=11
NC_008570.1	RefSeq	gene	2802500	2803288	.	-	.	ID=gene2514;Dbxref=GeneID:4488311;Name=AHA_2517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2517
NC_008570.1	RefSeq	CDS	2802500	2803288	.	-	0	ID=cds2445;Parent=gene2514;Dbxref=Genbank:YP_857030.1,GeneID:4488311;Name=YP_857030.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC nickel/di-oligopepetide transporter%2C ATP binding subunit;protein_id=YP_857030.1;transl_table=11
NC_008570.1	RefSeq	gene	2803392	2804204	.	-	.	ID=gene2515;Dbxref=GeneID:4488312;Name=AHA_2518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2518
NC_008570.1	RefSeq	CDS	2803392	2804204	.	-	0	ID=cds2446;Parent=gene2515;Dbxref=Genbank:YP_857031.1,GeneID:4488312;Name=YP_857031.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC nickel/di-oligopepetide transporter%2C permease subunit;protein_id=YP_857031.1;transl_table=11
NC_008570.1	RefSeq	gene	2804194	2805198	.	-	.	ID=gene2516;Dbxref=GeneID:4488313;Name=AHA_2519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2519
NC_008570.1	RefSeq	CDS	2804194	2805198	.	-	0	ID=cds2447;Parent=gene2516;Dbxref=Genbank:YP_857032.1,GeneID:4488313;Name=YP_857032.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC nickel/di-oligopepetide transporter%2C permease subunit;protein_id=YP_857032.1;transl_table=11
NC_008570.1	RefSeq	gene	2805183	2806814	.	-	.	ID=gene2517;Dbxref=GeneID:4488046;Name=AHA_2520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2520
NC_008570.1	RefSeq	CDS	2805183	2806814	.	-	0	ID=cds2448;Parent=gene2517;Dbxref=Genbank:YP_857033.1,GeneID:4488046;Name=YP_857033.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=nickel/di-oligopepetide ABC transporter substrate-binding protein;protein_id=YP_857033.1;transl_table=11
NC_008570.1	RefSeq	gene	2806922	2807470	.	-	.	ID=gene2518;Dbxref=GeneID:4488047;Name=AHA_2521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2521
NC_008570.1	RefSeq	CDS	2806922	2807470	.	-	0	ID=cds2449;Parent=gene2518;Dbxref=Genbank:YP_857034.1,GeneID:4488047;Name=YP_857034.1;gbkey=CDS;product=hydrogenase 2-specific chaperone;protein_id=YP_857034.1;transl_table=11
NC_008570.1	RefSeq	gene	2807452	2807982	.	-	.	ID=gene2519;Dbxref=GeneID:4488048;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AHA_2522
NC_008570.1	RefSeq	CDS	2807452	2807982	.	-	0	ID=cds2450;Parent=gene2519;Dbxref=Genbank:YP_857035.1,GeneID:4488048;Name=YP_857035.1;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC);gbkey=CDS;gene=hybD;product=hydrogenase 2 maturation endopeptidase;protein_id=YP_857035.1;transl_table=11
NC_008570.1	RefSeq	gene	2807982	2809685	.	-	.	ID=gene2520;Dbxref=GeneID:4488049;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AHA_2523
NC_008570.1	RefSeq	CDS	2807982	2809685	.	-	0	ID=cds2451;Parent=gene2520;Dbxref=Genbank:YP_857036.1,GeneID:4488049;Name=YP_857036.1;Note=involved in hydrogen uptake;gbkey=CDS;gene=hybC;product=hydrogenase 2 large subunit;protein_id=YP_857036.1;transl_table=11
NC_008570.1	RefSeq	gene	2809682	2810869	.	-	.	ID=gene2521;Dbxref=GeneID:4488050;Name=AHA_2524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2524
NC_008570.1	RefSeq	CDS	2809682	2810869	.	-	0	ID=cds2452;Parent=gene2521;Dbxref=Genbank:YP_857037.1,GeneID:4488050;Name=YP_857037.1;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;gbkey=CDS;product=hydrogenase 2 b cytochrome subunit;protein_id=YP_857037.1;transl_table=11
NC_008570.1	RefSeq	gene	2810862	2811887	.	-	.	ID=gene2522;Dbxref=GeneID:4488051;Name=AHA_2525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2525
NC_008570.1	RefSeq	CDS	2810862	2811887	.	-	0	ID=cds2453;Parent=gene2522;Dbxref=Genbank:YP_857038.1,GeneID:4488051;Name=YP_857038.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;product=hydrogenase 2 protein HybA;protein_id=YP_857038.1;transl_table=11
NC_008570.1	RefSeq	gene	2811890	2813023	.	-	.	ID=gene2523;Dbxref=GeneID:4488052;Name=AHA_2526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2526
NC_008570.1	RefSeq	CDS	2811890	2813023	.	-	0	ID=cds2454;Parent=gene2523;Dbxref=Genbank:YP_857039.1,GeneID:4488052;Name=YP_857039.1;Note=involved in hydrogen uptake;gbkey=CDS;product=hydrogenase 2 small subunit;protein_id=YP_857039.1;transl_table=11
NC_008570.1	RefSeq	gene	2813759	2814127	.	+	.	ID=gene2524;Dbxref=GeneID:4488053;Name=AHA_2527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2527
NC_008570.1	RefSeq	CDS	2813759	2814127	.	+	0	ID=cds2455;Parent=gene2524;Dbxref=Genbank:YP_857040.1,GeneID:4488053;Name=YP_857040.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=hypothetical protein;protein_id=YP_857040.1;transl_table=11
NC_008570.1	RefSeq	gene	2814124	2814444	.	+	.	ID=gene2525;Dbxref=GeneID:4488054;Name=AHA_2528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2528
NC_008570.1	RefSeq	CDS	2814124	2814444	.	+	0	ID=cds2456;Parent=gene2525;Dbxref=Genbank:YP_857041.1,GeneID:4488054;Name=YP_857041.1;Note=identified by match to protein family HMM PF01740;gbkey=CDS;product=anti-anti-sigma factor family protein;protein_id=YP_857041.1;transl_table=11
NC_008570.1	RefSeq	gene	2814431	2816587	.	+	.	ID=gene2526;Dbxref=GeneID:4488055;Name=AHA_2529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2529
NC_008570.1	RefSeq	CDS	2814431	2816587	.	+	0	ID=cds2457;Parent=gene2526;Dbxref=Genbank:YP_857042.1,GeneID:4488055;Name=YP_857042.1;Note=identified by match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895;gbkey=CDS;product=chemotaxis protein;protein_id=YP_857042.1;transl_table=11
NC_008570.1	RefSeq	gene	2816631	2818307	.	+	.	ID=gene2527;Dbxref=GeneID:4488056;Name=AHA_2530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2530
NC_008570.1	RefSeq	CDS	2816631	2818307	.	+	0	ID=cds2458;Parent=gene2527;Dbxref=Genbank:YP_857043.1,GeneID:4488056;Name=YP_857043.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857043.1;transl_table=11
NC_008570.1	RefSeq	gene	2818317	2818844	.	+	.	ID=gene2528;Dbxref=GeneID:4488057;Name=cheW-3;gbkey=Gene;gene=cheW-3;gene_biotype=protein_coding;locus_tag=AHA_2531
NC_008570.1	RefSeq	CDS	2818317	2818844	.	+	0	ID=cds2459;Parent=gene2528;Dbxref=Genbank:YP_857044.1,GeneID:4488057;Name=YP_857044.1;Note=identified by similarity to GB:AAB53941.1%3B match to protein family HMM PF01584;gbkey=CDS;gene=cheW-3;product=chemotaxis protein CheW;protein_id=YP_857044.1;transl_table=11
NC_008570.1	RefSeq	gene	2818847	2819710	.	+	.	ID=gene2529;Dbxref=GeneID:4488058;Name=cheR-2;gbkey=Gene;gene=cheR-2;gene_biotype=protein_coding;locus_tag=AHA_2532
NC_008570.1	RefSeq	CDS	2818847	2819710	.	+	0	ID=cds2460;Parent=gene2529;Dbxref=Genbank:YP_857045.1,GeneID:4488058;Name=YP_857045.1;Note=identified by similarity to SP:P07364%3B match to protein family HMM PF01739%3B match to protein family HMM PF03705;gbkey=CDS;gene=cheR-2;product=chemotaxis protein CheR;protein_id=YP_857045.1;transl_table=11
NC_008570.1	RefSeq	gene	2819707	2820783	.	+	.	ID=gene2530;Dbxref=GeneID:4488059;Name=cheB-3;gbkey=Gene;gene=cheB-3;gene_biotype=protein_coding;locus_tag=AHA_2533
NC_008570.1	RefSeq	CDS	2819707	2820783	.	+	0	ID=cds2461;Parent=gene2530;Dbxref=Genbank:YP_857046.1,GeneID:4488059;Name=YP_857046.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;gene=cheB-3;product=chemotaxis-specific methylesterase;protein_id=YP_857046.1;transl_table=11
NC_008570.1	RefSeq	gene	2820786	2821994	.	+	.	ID=gene2531;Dbxref=GeneID:4488060;Name=AHA_2534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2534
NC_008570.1	RefSeq	CDS	2820786	2821994	.	+	0	ID=cds2462;Parent=gene2531;Dbxref=Genbank:YP_857047.1,GeneID:4488060;Name=YP_857047.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00563;gbkey=CDS;product=response regulator;protein_id=YP_857047.1;transl_table=11
NC_008570.1	RefSeq	gene	2822106	2823737	.	+	.	ID=gene2532;Dbxref=GeneID:4488061;Name=AHA_2535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2535
NC_008570.1	RefSeq	CDS	2822106	2823737	.	+	0	ID=cds2463;Parent=gene2532;Dbxref=Genbank:YP_857048.1,GeneID:4488061;Name=YP_857048.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857048.1;transl_table=11
NC_008570.1	RefSeq	gene	2824216	2825325	.	+	.	ID=gene2533;Dbxref=GeneID:4489638;Name=alr-2;gbkey=Gene;gene=alr-2;gene_biotype=protein_coding;locus_tag=AHA_2536
NC_008570.1	RefSeq	CDS	2824216	2825325	.	+	0	ID=cds2464;Parent=gene2533;Dbxref=Genbank:YP_857049.1,GeneID:4489638;Name=YP_857049.1;Note=identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr-2;product=alanine racemase;protein_id=YP_857049.1;transl_table=11
NC_008570.1	RefSeq	gene	2825475	2826170	.	-	.	ID=gene2534;Dbxref=GeneID:4489639;Name=AHA_2537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2537
NC_008570.1	RefSeq	CDS	2825475	2826170	.	-	0	ID=cds2465;Parent=gene2534;Dbxref=Genbank:YP_857050.1,GeneID:4489639;Name=YP_857050.1;Note=identified by match to protein family HMM PF03483;gbkey=CDS;product=hypothetical protein;protein_id=YP_857050.1;transl_table=11
NC_008570.1	RefSeq	gene	2826214	2826816	.	+	.	ID=gene2535;Dbxref=GeneID:4489640;Name=AHA_2538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2538
NC_008570.1	RefSeq	CDS	2826214	2826816	.	+	0	ID=cds2466;Parent=gene2535;Dbxref=Genbank:YP_857051.1,GeneID:4489640;Name=YP_857051.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=YP_857051.1;transl_table=11
NC_008570.1	RefSeq	gene	2826979	2827066	.	-	.	ID=gene2536;Dbxref=GeneID:4489641;Name=AHA_2539;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2539
NC_008570.1	RefSeq	tRNA	2826979	2827066	.	-	.	ID=rna66;Parent=gene2536;Dbxref=GeneID:4489641;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	2826979	2827066	.	-	.	ID=id67;Parent=rna66;Dbxref=GeneID:4489641;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	2827250	2829091	.	-	.	ID=gene2537;Dbxref=GeneID:4489642;Name=AHA_2540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2540
NC_008570.1	RefSeq	CDS	2827250	2829091	.	-	0	ID=cds2467;Parent=gene2537;Dbxref=Genbank:YP_857052.1,GeneID:4489642;Name=YP_857052.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=sulfate transporter YchM;protein_id=YP_857052.1;transl_table=11
NC_008570.1	RefSeq	gene	2829543	2829618	.	+	.	ID=gene2538;Dbxref=GeneID:4489643;Name=AHA_2541;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2541
NC_008570.1	RefSeq	tRNA	2829543	2829618	.	+	.	ID=rna67;Parent=gene2538;Dbxref=GeneID:4489643;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	exon	2829543	2829618	.	+	.	ID=id68;Parent=rna67;Dbxref=GeneID:4489643;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	gene	2829621	2829696	.	+	.	ID=gene2539;Dbxref=GeneID:4489644;Name=AHA_2542;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2542
NC_008570.1	RefSeq	tRNA	2829621	2829696	.	+	.	ID=rna68;Parent=gene2539;Dbxref=GeneID:4489644;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	exon	2829621	2829696	.	+	.	ID=id69;Parent=rna68;Dbxref=GeneID:4489644;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	gene	2829840	2830325	.	+	.	ID=gene2540;Dbxref=GeneID:4489645;Name=AHA_2543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2543
NC_008570.1	RefSeq	CDS	2829840	2830325	.	+	0	ID=cds2468;Parent=gene2540;Dbxref=Genbank:YP_857053.1,GeneID:4489645;Name=YP_857053.1;Note=identified by match to protein family HMM PF03350;gbkey=CDS;product=hypothetical protein;protein_id=YP_857053.1;transl_table=11
NC_008570.1	RefSeq	gene	2830443	2830892	.	+	.	ID=gene2541;Dbxref=GeneID:4489646;Name=AHA_2544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2544
NC_008570.1	RefSeq	CDS	2830443	2830892	.	+	0	ID=cds2469;Parent=gene2541;Dbxref=Genbank:YP_857054.1,GeneID:4489646;Name=YP_857054.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857054.1;transl_table=11
NC_008570.1	RefSeq	gene	2830975	2833866	.	+	.	ID=gene2542;Dbxref=GeneID:4489647;Name=AHA_2545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2545
NC_008570.1	RefSeq	CDS	2830975	2833866	.	+	0	ID=cds2470;Parent=gene2542;Dbxref=Genbank:YP_857055.1,GeneID:4489647;Name=YP_857055.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857055.1;transl_table=11
NC_008570.1	RefSeq	gene	2833866	2834684	.	+	.	ID=gene2543;Dbxref=GeneID:4489648;Name=AHA_2546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2546
NC_008570.1	RefSeq	CDS	2833866	2834684	.	+	0	ID=cds2471;Parent=gene2543;Dbxref=Genbank:YP_857056.1,GeneID:4489648;Name=YP_857056.1;Note=identified by match to protein family HMM PF03239;gbkey=CDS;product=hypothetical protein;protein_id=YP_857056.1;transl_table=11
NC_008570.1	RefSeq	gene	2834709	2836205	.	+	.	ID=gene2544;Dbxref=GeneID:4489649;Name=AHA_2547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2547
NC_008570.1	RefSeq	CDS	2834709	2836205	.	+	0	ID=cds2472;Parent=gene2544;Dbxref=Genbank:YP_857057.1,GeneID:4489649;Name=YP_857057.1;Note=identified by match to protein family HMM PF01593;gbkey=CDS;product=hypothetical protein;protein_id=YP_857057.1;transl_table=11
NC_008570.1	RefSeq	gene	2836353	2836913	.	+	.	ID=gene2545;Dbxref=GeneID:4489650;Name=AHA_2548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2548
NC_008570.1	RefSeq	CDS	2836353	2836913	.	+	0	ID=cds2473;Parent=gene2545;Dbxref=Genbank:YP_857058.1,GeneID:4489650;Name=YP_857058.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857058.1;transl_table=11
NC_008570.1	RefSeq	gene	2837093	2838376	.	+	.	ID=gene2546;Dbxref=GeneID:4489651;Name=AHA_2549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2549
NC_008570.1	RefSeq	CDS	2837093	2838376	.	+	0	ID=cds2474;Parent=gene2546;Dbxref=Genbank:YP_857059.1,GeneID:4489651;Name=YP_857059.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857059.1;transl_table=11
NC_008570.1	RefSeq	gene	2838428	2839618	.	+	.	ID=gene2547;Dbxref=GeneID:4489652;Name=AHA_2550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2550
NC_008570.1	RefSeq	CDS	2838428	2839618	.	+	0	ID=cds2475;Parent=gene2547;Dbxref=Genbank:YP_857060.1,GeneID:4489652;Name=YP_857060.1;Note=identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710;gbkey=CDS;product=bicyclomycin resistance protein;protein_id=YP_857060.1;transl_table=11
NC_008570.1	RefSeq	gene	2839716	2840183	.	-	.	ID=gene2548;Dbxref=GeneID:4489653;Name=AHA_2551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2551
NC_008570.1	RefSeq	CDS	2839716	2840183	.	-	0	ID=cds2476;Parent=gene2548;Dbxref=Genbank:YP_857061.1,GeneID:4489653;Name=YP_857061.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857061.1;transl_table=11
NC_008570.1	RefSeq	gene	2840204	2841016	.	+	.	ID=gene2549;Dbxref=GeneID:4489654;Name=AHA_2552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2552
NC_008570.1	RefSeq	CDS	2840204	2841016	.	+	0	ID=cds2477;Parent=gene2549;Dbxref=Genbank:YP_857062.1,GeneID:4489654;Name=YP_857062.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=YP_857062.1;transl_table=11
NC_008570.1	RefSeq	gene	2841062	2843461	.	+	.	ID=gene2550;Dbxref=GeneID:4489655;Name=AHA_2553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2553
NC_008570.1	RefSeq	CDS	2841062	2843461	.	+	0	ID=cds2478;Parent=gene2550;Dbxref=Genbank:YP_857063.1,GeneID:4489655;Name=YP_857063.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=adhesion component transport transmembrane protein;protein_id=YP_857063.1;transl_table=11
NC_008570.1	RefSeq	gene	2843458	2844642	.	+	.	ID=gene2551;Dbxref=GeneID:4489656;Name=AHA_2554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2554
NC_008570.1	RefSeq	CDS	2843458	2844642	.	+	0	ID=cds2479;Parent=gene2551;Dbxref=Genbank:YP_857064.1,GeneID:4489656;Name=YP_857064.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857064.1;transl_table=11
NC_008570.1	RefSeq	gene	2844744	2845688	.	-	.	ID=gene2552;Dbxref=GeneID:4489695;Name=AHA_2555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2555
NC_008570.1	RefSeq	CDS	2844744	2845688	.	-	0	ID=cds2480;Parent=gene2552;Dbxref=Genbank:YP_857065.1,GeneID:4489695;Name=YP_857065.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857065.1;transl_table=11
NC_008570.1	RefSeq	gene	2846931	2849723	.	-	.	ID=gene2553;Dbxref=GeneID:4489696;Name=AHA_2556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2556
NC_008570.1	RefSeq	CDS	2846931	2849723	.	-	0	ID=cds2481;Parent=gene2553;Dbxref=Genbank:YP_857066.1,GeneID:4489696;Name=YP_857066.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_857066.1;transl_table=11
NC_008570.1	RefSeq	gene	2849723	2850367	.	-	.	ID=gene2554;Dbxref=GeneID:4489697;Name=AHA_2557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2557
NC_008570.1	RefSeq	CDS	2849723	2850367	.	-	0	ID=cds2482;Parent=gene2554;Dbxref=Genbank:YP_857067.1,GeneID:4489697;Name=YP_857067.1;Note=identified by match to protein family HMM PF02589;gbkey=CDS;product=hypothetical protein;protein_id=YP_857067.1;transl_table=11
NC_008570.1	RefSeq	gene	2850369	2851805	.	-	.	ID=gene2555;Dbxref=GeneID:4489698;Name=AHA_2558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2558
NC_008570.1	RefSeq	CDS	2850369	2851805	.	-	0	ID=cds2483;Parent=gene2555;Dbxref=Genbank:YP_857068.1,GeneID:4489698;Name=YP_857068.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR00273;gbkey=CDS;product=iron-sulfur cluster binding protein;protein_id=YP_857068.1;transl_table=11
NC_008570.1	RefSeq	gene	2851798	2852589	.	-	.	ID=gene2556;Dbxref=GeneID:4489699;Name=AHA_2559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2559
NC_008570.1	RefSeq	CDS	2851798	2852589	.	-	0	ID=cds2484;Parent=gene2556;Dbxref=Genbank:YP_857069.1,GeneID:4489699;Name=YP_857069.1;Note=identified by match to protein family HMM PF02754;gbkey=CDS;product=Fe-S oxidoreductase;protein_id=YP_857069.1;transl_table=11
NC_008570.1	RefSeq	gene	2852603	2854300	.	-	.	ID=gene2557;Dbxref=GeneID:4489700;Name=AHA_2560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2560
NC_008570.1	RefSeq	CDS	2852603	2854300	.	-	0	ID=cds2485;Parent=gene2557;Dbxref=Genbank:YP_857070.1,GeneID:4489700;Name=YP_857070.1;Note=identified by similarity to SP:P33231%3B match to protein family HMM PF02652;gbkey=CDS;product=lactate permease (LctP) family protein;protein_id=YP_857070.1;transl_table=11
NC_008570.1	RefSeq	gene	2854361	2855338	.	+	.	ID=gene2558;Dbxref=GeneID:4489701;Name=AHA_2561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2561
NC_008570.1	RefSeq	CDS	2854361	2855338	.	+	0	ID=cds2486;Parent=gene2558;Dbxref=Genbank:YP_857071.1,GeneID:4489701;Name=YP_857071.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator;protein_id=YP_857071.1;transl_table=11
NC_008570.1	RefSeq	gene	2855405	2855719	.	+	.	ID=gene2559;Dbxref=GeneID:4489702;Name=AHA_2562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2562
NC_008570.1	RefSeq	CDS	2855405	2855719	.	+	0	ID=cds2487;Parent=gene2559;Dbxref=Genbank:YP_857072.1,GeneID:4489702;Name=YP_857072.1;gbkey=CDS;product=arylsulfate sulfotransferase;protein_id=YP_857072.1;transl_table=11
NC_008570.1	RefSeq	gene	2855796	2856191	.	-	.	ID=gene2560;Dbxref=GeneID:4489703;Name=AHA_2563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2563
NC_008570.1	RefSeq	CDS	2855796	2856191	.	-	0	ID=cds2488;Parent=gene2560;Dbxref=Genbank:YP_857073.1,GeneID:4489703;Name=YP_857073.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=lactoylglutathione lyase;protein_id=YP_857073.1;transl_table=11
NC_008570.1	RefSeq	gene	2856345	2857127	.	-	.	ID=gene2561;Dbxref=GeneID:4489704;Name=AHA_2564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2564
NC_008570.1	RefSeq	CDS	2856345	2857127	.	-	0	ID=cds2489;Parent=gene2561;Dbxref=Genbank:YP_857074.1,GeneID:4489704;Name=YP_857074.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=acetoin cleaving system dihydrolipoyllysine-residue acetyltransferase;protein_id=YP_857074.1;transl_table=11
NC_008570.1	RefSeq	gene	2857234	2857590	.	+	.	ID=gene2562;Dbxref=GeneID:4489705;Name=AHA_2565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2565
NC_008570.1	RefSeq	CDS	2857234	2857590	.	+	0	ID=cds2490;Parent=gene2562;Dbxref=Genbank:YP_857075.1,GeneID:4489705;Name=YP_857075.1;Note=identified by similarity to GB:CAB66213.1%3B match to protein family HMM PF04237;gbkey=CDS;product=hypothetical protein;protein_id=YP_857075.1;transl_table=11
NC_008570.1	RefSeq	gene	2857587	2858075	.	+	.	ID=gene2563;Dbxref=GeneID:4489706;Name=AHA_2566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2566
NC_008570.1	RefSeq	CDS	2857587	2858075	.	+	0	ID=cds2491;Parent=gene2563;Dbxref=Genbank:YP_857076.1,GeneID:4489706;Name=YP_857076.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_857076.1;transl_table=11
NC_008570.1	RefSeq	gene	2858109	2858465	.	+	.	ID=gene2564;Dbxref=GeneID:4489707;Name=AHA_2567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2567
NC_008570.1	RefSeq	CDS	2858109	2858465	.	+	0	ID=cds2492;Parent=gene2564;Dbxref=Genbank:YP_857077.1,GeneID:4489707;Name=YP_857077.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857077.1;transl_table=11
NC_008570.1	RefSeq	gene	2858806	2859438	.	-	.	ID=gene2565;Dbxref=GeneID:4489708;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AHA_2568
NC_008570.1	RefSeq	CDS	2858806	2859438	.	-	0	ID=cds2493;Parent=gene2565;Dbxref=Genbank:YP_857078.1,GeneID:4489708;Name=YP_857078.1;Note=identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401;gbkey=CDS;gene=msrA;product=methionine-S-sulfoxide reductase;protein_id=YP_857078.1;transl_table=11
NC_008570.1	RefSeq	gene	2859698	2861026	.	+	.	ID=gene2566;Dbxref=GeneID:4489709;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AHA_2569
NC_008570.1	RefSeq	CDS	2859698	2861026	.	+	0	ID=cds2494;Parent=gene2566;Dbxref=Genbank:YP_857079.1,GeneID:4489709;Name=YP_857079.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;gene=argA;product=N-acetylglutamate synthase;protein_id=YP_857079.1;transl_table=11
NC_008570.1	RefSeq	gene	2861448	2862800	.	+	.	ID=gene2567;Dbxref=GeneID:4489710;Name=AHA_2570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2570
NC_008570.1	RefSeq	CDS	2861448	2862800	.	+	0	ID=cds2495;Parent=gene2567;Dbxref=Genbank:YP_857080.1,GeneID:4489710;Name=YP_857080.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=YP_857080.1;transl_table=11
NC_008570.1	RefSeq	gene	2862895	2863983	.	-	.	ID=gene2568;Dbxref=GeneID:4489711;Name=AHA_2571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2571
NC_008570.1	RefSeq	CDS	2862895	2863983	.	-	0	ID=cds2496;Parent=gene2568;Dbxref=Genbank:YP_857081.1,GeneID:4489711;Name=YP_857081.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857081.1;transl_table=11
NC_008570.1	RefSeq	gene	2864238	2866499	.	+	.	ID=gene2569;Dbxref=GeneID:4489712;Name=AHA_2572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2572
NC_008570.1	RefSeq	CDS	2864238	2866499	.	+	0	ID=cds2497;Parent=gene2569;Dbxref=Genbank:YP_857082.1,GeneID:4489712;Name=YP_857082.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;product=sulfatase;protein_id=YP_857082.1;transl_table=11
NC_008570.1	RefSeq	gene	2866589	2867602	.	-	.	ID=gene2570;Dbxref=GeneID:4489713;Name=AHA_2573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2573
NC_008570.1	RefSeq	CDS	2866589	2867602	.	-	0	ID=cds2498;Parent=gene2570;Dbxref=Genbank:YP_857083.1,GeneID:4489713;Name=YP_857083.1;Note=identified by match to protein family HMM PF02016;gbkey=CDS;product=microcin immunity protein;protein_id=YP_857083.1;transl_table=11
NC_008570.1	RefSeq	gene	2867868	2868710	.	+	.	ID=gene2571;Dbxref=GeneID:4489714;Name=AHA_2574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2574
NC_008570.1	RefSeq	CDS	2867868	2868710	.	+	0	ID=cds2499;Parent=gene2571;Dbxref=Genbank:YP_857084.1,GeneID:4489714;Name=YP_857084.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_857084.1;transl_table=11
NC_008570.1	RefSeq	gene	2868909	2869967	.	+	.	ID=gene2572;Dbxref=GeneID:4490897;Name=AHA_2575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2575
NC_008570.1	RefSeq	CDS	2868909	2869967	.	+	0	ID=cds2500;Parent=gene2572;Dbxref=Genbank:YP_857085.1,GeneID:4490897;Name=YP_857085.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR02910;gbkey=CDS;product=anaerobic sulfite reductase subunit A;protein_id=YP_857085.1;transl_table=11
NC_008570.1	RefSeq	gene	2869969	2870808	.	+	.	ID=gene2573;Dbxref=GeneID:4490898;Name=AHA_2576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2576
NC_008570.1	RefSeq	CDS	2869969	2870808	.	+	0	ID=cds2501;Parent=gene2573;Dbxref=Genbank:YP_857086.1,GeneID:4490898;Name=YP_857086.1;Note=with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide;gbkey=CDS;product=anaerobic sulfite reductase subunit B;protein_id=YP_857086.1;transl_table=11
NC_008570.1	RefSeq	gene	2870820	2871830	.	+	.	ID=gene2574;Dbxref=GeneID:4490899;Name=AHA_2577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2577
NC_008570.1	RefSeq	CDS	2870820	2871830	.	+	0	ID=cds2502;Parent=gene2574;Dbxref=Genbank:YP_857087.1,GeneID:4490899;Name=YP_857087.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM TIGR02912;gbkey=CDS;product=anaerobic sulfite reductase subunit C;protein_id=YP_857087.1;transl_table=11
NC_008570.1	RefSeq	gene	2872003	2873394	.	+	.	ID=gene2575;Dbxref=GeneID:4490900;Name=AHA_2578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2578
NC_008570.1	RefSeq	CDS	2872003	2873394	.	+	0	ID=cds2503;Parent=gene2575;Dbxref=Genbank:YP_857088.1,GeneID:4490900;Name=YP_857088.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469%3B match to protein family HMM TIGR01470;gbkey=CDS;product=siroheme synthase;protein_id=YP_857088.1;transl_table=11
NC_008570.1	RefSeq	gene	2873483	2874085	.	-	.	ID=gene2576;Dbxref=GeneID:4490901;Name=AHA_2579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2579
NC_008570.1	RefSeq	CDS	2873483	2874085	.	-	0	ID=cds2504;Parent=gene2576;Dbxref=Genbank:YP_857089.1,GeneID:4490901;Name=YP_857089.1;gbkey=CDS;product=lipoprotein;protein_id=YP_857089.1;transl_table=11
NC_008570.1	RefSeq	gene	2874358	2874675	.	-	.	ID=gene2577;Dbxref=GeneID:4490902;Name=AHA_2580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2580
NC_008570.1	RefSeq	CDS	2874358	2874675	.	-	0	ID=cds2505;Parent=gene2577;Dbxref=Genbank:YP_857090.1,GeneID:4490902;Name=YP_857090.1;Note=identified by match to protein family HMM PF01906;gbkey=CDS;product=hypothetical protein;protein_id=YP_857090.1;transl_table=11
NC_008570.1	RefSeq	gene	2874944	2876233	.	+	.	ID=gene2578;Dbxref=GeneID:4490903;Name=AHA_2581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2581
NC_008570.1	RefSeq	CDS	2874944	2876233	.	+	0	ID=cds2506;Parent=gene2578;Dbxref=Genbank:YP_857091.1,GeneID:4490903;Name=YP_857091.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857091.1;transl_table=11
NC_008570.1	RefSeq	gene	2876258	2877337	.	+	.	ID=gene2579;Dbxref=GeneID:4490904;Name=AHA_2582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2582
NC_008570.1	RefSeq	CDS	2876258	2877337	.	+	0	ID=cds2507;Parent=gene2579;Dbxref=Genbank:YP_857092.1,GeneID:4490904;Name=YP_857092.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857092.1;transl_table=11
NC_008570.1	RefSeq	gene	2877383	2878183	.	+	.	ID=gene2580;Dbxref=GeneID:4490905;Name=AHA_2583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2583
NC_008570.1	RefSeq	CDS	2877383	2878183	.	+	0	ID=cds2508;Parent=gene2580;Dbxref=Genbank:YP_857093.1,GeneID:4490905;Name=YP_857093.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857093.1;transl_table=11
NC_008570.1	RefSeq	gene	2878289	2879581	.	-	.	ID=gene2581;Dbxref=GeneID:4490906;Name=AHA_2584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2584
NC_008570.1	RefSeq	CDS	2878289	2879581	.	-	0	ID=cds2509;Parent=gene2581;Dbxref=Genbank:YP_857094.1,GeneID:4490906;Name=YP_857094.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;product=NADH dehydrogenase;protein_id=YP_857094.1;transl_table=11
NC_008570.1	RefSeq	gene	2879660	2880295	.	-	.	ID=gene2582;Dbxref=GeneID:4490907;Name=AHA_2585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2585
NC_008570.1	RefSeq	CDS	2879660	2880295	.	-	0	ID=cds2510;Parent=gene2582;Dbxref=Genbank:YP_857095.1,GeneID:4490907;Name=YP_857095.1;Note=identified by match to protein family HMM PF05728;gbkey=CDS;product=hypothetical protein;protein_id=YP_857095.1;transl_table=11
NC_008570.1	RefSeq	gene	2880669	2882084	.	+	.	ID=gene2583;Dbxref=GeneID:4490908;Name=AHA_2586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2586
NC_008570.1	RefSeq	CDS	2880669	2882084	.	+	0	ID=cds2511;Parent=gene2583;Dbxref=Genbank:YP_857096.1,GeneID:4490908;Name=YP_857096.1;Note=identified by similarity to SP:P42086%3B match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;product=xanthine permease;protein_id=YP_857096.1;transl_table=11
NC_008570.1	RefSeq	gene	2882137	2883945	.	-	.	ID=gene2584;Dbxref=GeneID:4490909;Name=AHA_2587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2587
NC_008570.1	RefSeq	CDS	2882137	2883945	.	-	0	ID=cds2512;Parent=gene2584;Dbxref=Genbank:YP_857097.1,GeneID:4490909;Name=YP_857097.1;Note=identified by match to protein family HMM PF01432;gbkey=CDS;product=oligoendopeptidase F;protein_id=YP_857097.1;transl_table=11
NC_008570.1	RefSeq	gene	2884039	2885817	.	-	.	ID=gene2585;Dbxref=GeneID:4490910;Name=AHA_2588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2588
NC_008570.1	RefSeq	CDS	2884039	2885817	.	-	0	ID=cds2513;Parent=gene2585;Dbxref=Genbank:YP_857098.1,GeneID:4490910;Name=YP_857098.1;Note=identified by match to protein family HMM PF01432;gbkey=CDS;product=oligoendopeptidase F;protein_id=YP_857098.1;transl_table=11
NC_008570.1	RefSeq	gene	2885999	2886916	.	-	.	ID=gene2586;Dbxref=GeneID:4490911;Name=AHA_2589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2589
NC_008570.1	RefSeq	CDS	2885999	2886916	.	-	0	ID=cds2514;Parent=gene2586;Dbxref=Genbank:YP_857099.1,GeneID:4490911;Name=YP_857099.1;Note=identified by match to protein family HMM PF05661;gbkey=CDS;product=inner membrane protein YedI;protein_id=YP_857099.1;transl_table=11
NC_008570.1	RefSeq	gene	2887175	2887777	.	+	.	ID=gene2587;Dbxref=GeneID:4490912;Name=AHA_2590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2590
NC_008570.1	RefSeq	CDS	2887175	2887777	.	+	0	ID=cds2515;Parent=gene2587;Dbxref=Genbank:YP_857100.1,GeneID:4490912;Name=YP_857100.1;Note=identified by match to protein family HMM PF06041;gbkey=CDS;product=hypothetical protein;protein_id=YP_857100.1;transl_table=11
NC_008570.1	RefSeq	gene	2887842	2888849	.	-	.	ID=gene2588;Dbxref=GeneID:4490913;Name=secF-2;gbkey=Gene;gene=secF-2;gene_biotype=protein_coding;locus_tag=AHA_2591
NC_008570.1	RefSeq	CDS	2887842	2888849	.	-	0	ID=cds2516;Parent=gene2588;Dbxref=Genbank:YP_857101.1,GeneID:4490913;Name=YP_857101.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF-2;product=protein-export membrane protein SecF;protein_id=YP_857101.1;transl_table=11
NC_008570.1	RefSeq	gene	2888869	2890722	.	-	.	ID=gene2589;Dbxref=GeneID:4490914;Name=secD-2;gbkey=Gene;gene=secD-2;gene_biotype=protein_coding;locus_tag=AHA_2592
NC_008570.1	RefSeq	CDS	2888869	2890722	.	-	0	ID=cds2517;Parent=gene2589;Dbxref=Genbank:YP_857102.1,GeneID:4490914;Name=YP_857102.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD-2;product=protein-export membrane protein SecD;protein_id=YP_857102.1;transl_table=11
NC_008570.1	RefSeq	gene	2890819	2891325	.	-	.	ID=gene2590;Dbxref=GeneID:4490915;Name=AHA_2593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2593
NC_008570.1	RefSeq	CDS	2890819	2891325	.	-	0	ID=cds2518;Parent=gene2590;Dbxref=Genbank:YP_857103.1,GeneID:4490915;Name=YP_857103.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857103.1;transl_table=11
NC_008570.1	RefSeq	gene	2891392	2892249	.	-	.	ID=gene2591;Dbxref=GeneID:4487458;Name=AHA_2594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2594
NC_008570.1	RefSeq	CDS	2891392	2892249	.	-	0	ID=cds2519;Parent=gene2591;Dbxref=Genbank:YP_857104.1,GeneID:4487458;Name=YP_857104.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857104.1;transl_table=11
NC_008570.1	RefSeq	gene	2892311	2892982	.	-	.	ID=gene2592;Dbxref=GeneID:4487459;Name=AHA_2595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2595
NC_008570.1	RefSeq	CDS	2892311	2892982	.	-	0	ID=cds2520;Parent=gene2592;Dbxref=Genbank:YP_857105.1,GeneID:4487459;Name=YP_857105.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857105.1;transl_table=11
NC_008570.1	RefSeq	gene	2893155	2893751	.	-	.	ID=gene2593;Dbxref=GeneID:4487460;Name=AHA_2596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2596
NC_008570.1	RefSeq	CDS	2893155	2893751	.	-	0	ID=cds2521;Parent=gene2593;Dbxref=Genbank:YP_857106.1,GeneID:4487460;Name=YP_857106.1;Note=identified by match to protein family HMM TIGR02722;gbkey=CDS;product=hypothetical protein;protein_id=YP_857106.1;transl_table=11
NC_008570.1	RefSeq	gene	2893751	2894149	.	-	.	ID=gene2594;Dbxref=GeneID:4487461;Name=AHA_2597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2597
NC_008570.1	RefSeq	CDS	2893751	2894149	.	-	0	ID=cds2522;Parent=gene2594;Dbxref=Genbank:YP_857107.1,GeneID:4487461;Name=YP_857107.1;Note=identified by match to protein family HMM PF07233;gbkey=CDS;product=hypothetical protein;protein_id=YP_857107.1;transl_table=11
NC_008570.1	RefSeq	gene	2894218	2895564	.	-	.	ID=gene2595;Dbxref=GeneID:4487462;Name=AHA_2598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2598
NC_008570.1	RefSeq	CDS	2894218	2895564	.	-	0	ID=cds2523;Parent=gene2595;Dbxref=Genbank:YP_857108.1,GeneID:4487462;Name=YP_857108.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857108.1;transl_table=11
NC_008570.1	RefSeq	gene	2895639	2895989	.	-	.	ID=gene2596;Dbxref=GeneID:4487463;Name=AHA_2599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2599
NC_008570.1	RefSeq	CDS	2895639	2895989	.	-	0	ID=cds2524;Parent=gene2596;Dbxref=Genbank:YP_857109.1,GeneID:4487463;Name=YP_857109.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;product=HIT family hydrolase;protein_id=YP_857109.1;transl_table=11
NC_008570.1	RefSeq	gene	2896087	2898252	.	+	.	ID=gene2597;Dbxref=GeneID:4487464;Name=AHA_2600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2600
NC_008570.1	RefSeq	CDS	2896087	2898252	.	+	0	ID=cds2525;Parent=gene2597;Dbxref=Genbank:YP_857110.1,GeneID:4487464;Name=YP_857110.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857110.1;transl_table=11
NC_008570.1	RefSeq	gene	2898328	2899146	.	-	.	ID=gene2598;Dbxref=GeneID:4487465;Name=AHA_2601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2601
NC_008570.1	RefSeq	CDS	2898328	2899146	.	-	0	ID=cds2526;Parent=gene2598;Dbxref=Genbank:YP_857111.1,GeneID:4487465;Name=YP_857111.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857111.1;transl_table=11
NC_008570.1	RefSeq	gene	2899292	2900635	.	+	.	ID=gene2599;Dbxref=GeneID:4487466;Name=AHA_2602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2602
NC_008570.1	RefSeq	CDS	2899292	2900635	.	+	0	ID=cds2527;Parent=gene2599;Dbxref=Genbank:YP_857112.1,GeneID:4487466;Name=YP_857112.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;product=dihydroorotase;protein_id=YP_857112.1;transl_table=11
NC_008570.1	RefSeq	gene	2900868	2900944	.	+	.	ID=gene2600;Dbxref=GeneID:4487467;Name=AHA_2603;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2603
NC_008570.1	RefSeq	tRNA	2900868	2900944	.	+	.	ID=rna69;Parent=gene2600;Dbxref=GeneID:4487467;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	exon	2900868	2900944	.	+	.	ID=id70;Parent=rna69;Dbxref=GeneID:4487467;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	gene	2901009	2901560	.	+	.	ID=gene2601;Dbxref=GeneID:4487468;Name=AHA_2604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2604
NC_008570.1	RefSeq	CDS	2901009	2901560	.	+	0	ID=cds2528;Parent=gene2601;Dbxref=Genbank:YP_857113.1,GeneID:4487468;Name=YP_857113.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857113.1;transl_table=11
NC_008570.1	RefSeq	gene	2901652	2903025	.	+	.	ID=gene2602;Dbxref=GeneID:4487469;Name=AHA_2605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2605
NC_008570.1	RefSeq	CDS	2901652	2903025	.	+	0	ID=cds2529;Parent=gene2602;Dbxref=Genbank:YP_857114.1,GeneID:4487469;Name=YP_857114.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;product=proton/sodium-glutamate symport protein;protein_id=YP_857114.1;transl_table=11
NC_008570.1	RefSeq	gene	2903101	2903556	.	-	.	ID=gene2603;Dbxref=GeneID:4487470;Name=AHA_2606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2606
NC_008570.1	RefSeq	CDS	2903101	2903556	.	-	0	ID=cds2530;Parent=gene2603;Dbxref=Genbank:YP_857115.1,GeneID:4487470;Name=YP_857115.1;Note=identified by similarity to GB:AAY91672.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857115.1;transl_table=11
NC_008570.1	RefSeq	gene	2903747	2904973	.	+	.	ID=gene2604;Dbxref=GeneID:4487471;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AHA_2607
NC_008570.1	RefSeq	CDS	2903747	2904973	.	+	0	ID=cds2531;Parent=gene2604;Dbxref=Genbank:YP_857116.1,GeneID:4487471;Name=YP_857116.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=YP_857116.1;transl_table=11
NC_008570.1	RefSeq	gene	2905030	2905974	.	-	.	ID=gene2605;Dbxref=GeneID:4487472;Name=AHA_2608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2608
NC_008570.1	RefSeq	CDS	2905030	2905974	.	-	0	ID=cds2532;Parent=gene2605;Dbxref=Genbank:YP_857117.1,GeneID:4487472;Name=YP_857117.1;Note=identified by match to protein family HMM PF03741;gbkey=CDS;product=Alx protein;protein_id=YP_857117.1;transl_table=11
NC_008570.1	RefSeq	gene	2906268	2907263	.	-	.	ID=gene2606;Dbxref=GeneID:4487473;Name=AHA_2609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2609
NC_008570.1	RefSeq	CDS	2906268	2907263	.	-	0	ID=cds2533;Parent=gene2606;Dbxref=Genbank:YP_857118.1,GeneID:4487473;Name=YP_857118.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide ABC transporter ATP-binding protein OppF;protein_id=YP_857118.1;transl_table=11
NC_008570.1	RefSeq	gene	2907264	2908244	.	-	.	ID=gene2607;Dbxref=GeneID:4487474;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AHA_2610
NC_008570.1	RefSeq	CDS	2907264	2908244	.	-	0	ID=cds2534;Parent=gene2607;Dbxref=Genbank:YP_857119.1,GeneID:4487474;Name=YP_857119.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;gene=oppD;product=oligopeptide ABC transporter ATP-binding protein;protein_id=YP_857119.1;transl_table=11
NC_008570.1	RefSeq	gene	2908345	2909256	.	-	.	ID=gene2608;Dbxref=GeneID:4487475;Name=AHA_2611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2611
NC_008570.1	RefSeq	CDS	2908345	2909256	.	-	0	ID=cds2535;Parent=gene2608;Dbxref=Genbank:YP_857120.1,GeneID:4487475;Name=YP_857120.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide ABC transporter permease OppC;protein_id=YP_857120.1;transl_table=11
NC_008570.1	RefSeq	gene	2909271	2910191	.	-	.	ID=gene2609;Dbxref=GeneID:4487476;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AHA_2612
NC_008570.1	RefSeq	CDS	2909271	2910191	.	-	0	ID=cds2536;Parent=gene2609;Dbxref=Genbank:YP_857121.1,GeneID:4487476;Name=YP_857121.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;gene=oppB;product=oligopeptide transporter permease;protein_id=YP_857121.1;transl_table=11
NC_008570.1	RefSeq	gene	2910289	2911908	.	-	.	ID=gene2610;Dbxref=GeneID:4487477;Name=AHA_2613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2613
NC_008570.1	RefSeq	CDS	2910289	2911908	.	-	0	ID=cds2537;Parent=gene2610;Dbxref=Genbank:YP_857122.1,GeneID:4487477;Name=YP_857122.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter periplasmic oligopeptide-binding protein;protein_id=YP_857122.1;transl_table=11
NC_008570.1	RefSeq	gene	2912188	2912862	.	-	.	ID=gene2611;Dbxref=GeneID:4490209;Name=AHA_2614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2614
NC_008570.1	RefSeq	CDS	2912188	2912862	.	-	0	ID=cds2538;Parent=gene2611;Dbxref=Genbank:YP_857123.1,GeneID:4490209;Name=YP_857123.1;Note=identified by match to protein family HMM PF01914%3B match to protein family HMM TIGR00427;gbkey=CDS;product=hypothetical protein;protein_id=YP_857123.1;transl_table=11
NC_008570.1	RefSeq	gene	2912997	2913725	.	+	.	ID=gene2612;Dbxref=GeneID:4490210;Name=AHA_2615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2615
NC_008570.1	RefSeq	CDS	2912997	2913725	.	+	0	ID=cds2539;Parent=gene2612;Dbxref=Genbank:YP_857124.1,GeneID:4490210;Name=YP_857124.1;Note=identified by similarity to GB:BAB74783.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857124.1;transl_table=11
NC_008570.1	RefSeq	gene	2914021	2916696	.	+	.	ID=gene2613;Dbxref=GeneID:4490211;Name=AHA_2616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2616
NC_008570.1	RefSeq	CDS	2914021	2916696	.	+	0	ID=cds2540;Parent=gene2613;Dbxref=Genbank:YP_857125.1,GeneID:4490211;Name=YP_857125.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM PF00465;gbkey=CDS;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=YP_857125.1;transl_table=11
NC_008570.1	RefSeq	gene	2916806	2918041	.	+	.	ID=gene2614;Dbxref=GeneID:4490212;Name=AHA_2617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2617
NC_008570.1	RefSeq	CDS	2916806	2918041	.	+	0	ID=cds2541;Parent=gene2614;Dbxref=Genbank:YP_857126.1,GeneID:4490212;Name=YP_857126.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;product=HD domain-containing protein;protein_id=YP_857126.1;transl_table=11
NC_008570.1	RefSeq	gene	2918395	2920065	.	+	.	ID=gene2615;Dbxref=GeneID:4490213;Name=AHA_2618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2618
NC_008570.1	RefSeq	CDS	2918395	2920065	.	+	0	ID=cds2542;Parent=gene2615;Dbxref=Genbank:YP_857127.1,GeneID:4490213;Name=YP_857127.1;Note=identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_857127.1;transl_table=11
NC_008570.1	RefSeq	gene	2920123	2920827	.	+	.	ID=gene2616;Dbxref=GeneID:4490214;Name=AHA_2619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2619
NC_008570.1	RefSeq	CDS	2920123	2920827	.	+	0	ID=cds2543;Parent=gene2616;Dbxref=Genbank:YP_857128.1,GeneID:4490214;Name=YP_857128.1;Note=unknown function%3B when overproduced it confers drug-resistance;gbkey=CDS;product=two-component response-regulatory protein YehT;protein_id=YP_857128.1;transl_table=11
NC_008570.1	RefSeq	gene	2920968	2922389	.	+	.	ID=gene2617;Dbxref=GeneID:4490215;Name=AHA_2620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2620
NC_008570.1	RefSeq	CDS	2920968	2922389	.	+	0	ID=cds2544;Parent=gene2617;Dbxref=Genbank:YP_857129.1,GeneID:4490215;Name=YP_857129.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;product=CstA protein;protein_id=YP_857129.1;transl_table=11
NC_008570.1	RefSeq	gene	2922679	2923017	.	+	.	ID=gene2618;Dbxref=GeneID:4490216;Name=AHA_2621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2621
NC_008570.1	RefSeq	CDS	2922679	2923017	.	+	0	ID=cds2545;Parent=gene2618;Dbxref=Genbank:YP_857130.1,GeneID:4490216;Name=YP_857130.1;gbkey=CDS;product=inner membrane protein YiaW;protein_id=YP_857130.1;transl_table=11
NC_008570.1	RefSeq	gene	2923021	2924058	.	+	.	ID=gene2619;Dbxref=GeneID:4490217;Name=AHA_2622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2622
NC_008570.1	RefSeq	CDS	2923021	2924058	.	+	0	ID=cds2546;Parent=gene2619;Dbxref=Genbank:YP_857131.1,GeneID:4490217;Name=YP_857131.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_857131.1;transl_table=11
NC_008570.1	RefSeq	gene	2924173	2925933	.	+	.	ID=gene2620;Dbxref=GeneID:4490218;Name=AHA_2623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2623
NC_008570.1	RefSeq	CDS	2924173	2925933	.	+	0	ID=cds2547;Parent=gene2620;Dbxref=Genbank:YP_857132.1,GeneID:4490218;Name=YP_857132.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=helicase%2C ATP-dependent;protein_id=YP_857132.1;transl_table=11
NC_008570.1	RefSeq	gene	2926065	2927501	.	+	.	ID=gene2621;Dbxref=GeneID:4490219;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AHA_2624
NC_008570.1	RefSeq	CDS	2926065	2927501	.	+	0	ID=cds2548;Parent=gene2621;Dbxref=Genbank:YP_857133.1,GeneID:4490219;Name=YP_857133.1;Note=identified by match to protein family HMM PF02113%3B match to protein family HMM TIGR00666;gbkey=CDS;gene=dacB;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=YP_857133.1;transl_table=11
NC_008570.1	RefSeq	gene	2927644	2927907	.	+	.	ID=gene2622;Dbxref=GeneID:4490220;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AHA_2625
NC_008570.1	RefSeq	CDS	2927644	2927907	.	+	0	ID=cds2549;Parent=gene2622;Dbxref=Genbank:YP_857134.1,GeneID:4490220;Name=YP_857134.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;gene=grxA;product=glutaredoxin;protein_id=YP_857134.1;transl_table=11
NC_008570.1	RefSeq	gene	2927966	2928319	.	-	.	ID=gene2623;Dbxref=GeneID:4490221;Name=AHA_2626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2626
NC_008570.1	RefSeq	CDS	2927966	2928319	.	-	0	ID=cds2550;Parent=gene2623;Dbxref=Genbank:YP_857135.1,GeneID:4490221;Name=YP_857135.1;Note=identified by match to protein family HMM PF07866;gbkey=CDS;product=hypothetical protein;protein_id=YP_857135.1;transl_table=11
NC_008570.1	RefSeq	gene	2928558	2929772	.	+	.	ID=gene2624;Dbxref=GeneID:4490222;Name=AHA_2627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2627
NC_008570.1	RefSeq	CDS	2928558	2929772	.	+	0	ID=cds2551;Parent=gene2624;Dbxref=Genbank:YP_857136.1,GeneID:4490222;Name=YP_857136.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=YP_857136.1;transl_table=11
NC_008570.1	RefSeq	gene	2929838	2931313	.	-	.	ID=gene2625;Dbxref=GeneID:4490223;Name=AHA_2628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2628
NC_008570.1	RefSeq	CDS	2929838	2931313	.	-	0	ID=cds2552;Parent=gene2625;Dbxref=Genbank:YP_857137.1,GeneID:4490223;Name=YP_857137.1;Note=identified by match to protein family HMM PF03606;gbkey=CDS;product=arginine/ornithine antiporter;protein_id=YP_857137.1;transl_table=11
NC_008570.1	RefSeq	gene	2931477	2932670	.	-	.	ID=gene2626;Dbxref=GeneID:4490224;Name=AHA_2629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2629
NC_008570.1	RefSeq	CDS	2931477	2932670	.	-	0	ID=cds2553;Parent=gene2626;Dbxref=Genbank:YP_857138.1,GeneID:4490224;Name=YP_857138.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=YP_857138.1;transl_table=11
NC_008570.1	RefSeq	gene	2932995	2934293	.	+	.	ID=gene2627;Dbxref=GeneID:4490225;Name=AHA_2630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2630
NC_008570.1	RefSeq	CDS	2932995	2934293	.	+	0	ID=cds2554;Parent=gene2627;Dbxref=Genbank:YP_857139.1,GeneID:4490225;Name=YP_857139.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857139.1;transl_table=11
NC_008570.1	RefSeq	gene	2934330	2934536	.	+	.	ID=gene2628;Dbxref=GeneID:4490226;Name=AHA_2632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2632
NC_008570.1	RefSeq	CDS	2934330	2934536	.	+	0	ID=cds2555;Parent=gene2628;Dbxref=Genbank:YP_857140.1,GeneID:4490226;Name=YP_857140.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857140.1;transl_table=11
NC_008570.1	RefSeq	gene	2934354	2934551	.	-	.	ID=gene2629;Dbxref=GeneID:4490227;Name=AHA_2631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2631
NC_008570.1	RefSeq	CDS	2934354	2934551	.	-	0	ID=cds2556;Parent=gene2629;Dbxref=Genbank:YP_857141.1,GeneID:4490227;Name=YP_857141.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857141.1;transl_table=11
NC_008570.1	RefSeq	gene	2934602	2935642	.	-	.	ID=gene2630;Dbxref=GeneID:4490091;Name=AHA_2633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2633
NC_008570.1	RefSeq	CDS	2934602	2935642	.	-	0	ID=cds2557;Parent=gene2630;Dbxref=Genbank:YP_857142.1,GeneID:4490091;Name=YP_857142.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=YP_857142.1;transl_table=11
NC_008570.1	RefSeq	gene	2935611	2936192	.	+	.	ID=gene2631;Dbxref=GeneID:4490092;Name=rnfA;gbkey=Gene;gene=rnfA;gene_biotype=protein_coding;locus_tag=AHA_2634
NC_008570.1	RefSeq	CDS	2935611	2936192	.	+	0	ID=cds2558;Parent=gene2631;Dbxref=Genbank:YP_857143.1,GeneID:4490092;Name=YP_857143.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01943;gbkey=CDS;gene=rnfA;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=YP_857143.1;transl_table=11
NC_008570.1	RefSeq	gene	2936197	2936760	.	+	.	ID=gene2632;Dbxref=GeneID:4490093;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=AHA_2635
NC_008570.1	RefSeq	CDS	2936197	2936760	.	+	0	ID=cds2559;Parent=gene2632;Dbxref=Genbank:YP_857144.1,GeneID:4490093;Name=YP_857144.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;gene=rnfB;product=electron transport complex protein RnfB;protein_id=YP_857144.1;transl_table=11
NC_008570.1	RefSeq	gene	2936767	2939322	.	+	.	ID=gene2633;Dbxref=GeneID:4490094;Name=rnfC;gbkey=Gene;gene=rnfC;gene_biotype=protein_coding;locus_tag=AHA_2636
NC_008570.1	RefSeq	CDS	2936767	2939322	.	+	0	ID=cds2560;Parent=gene2633;Dbxref=Genbank:YP_857145.1,GeneID:4490094;Name=YP_857145.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512%3B match to protein family HMM TIGR01945;gbkey=CDS;gene=rnfC;product=RnfABCDGE type electron transport complex subunit C;protein_id=YP_857145.1;transl_table=11
NC_008570.1	RefSeq	gene	2939326	2940378	.	+	.	ID=gene2634;Dbxref=GeneID:4490095;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=AHA_2637
NC_008570.1	RefSeq	CDS	2939326	2940378	.	+	0	ID=cds2561;Parent=gene2634;Dbxref=Genbank:YP_857146.1,GeneID:4490095;Name=YP_857146.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;product=electron transport complex protein RnfD;protein_id=YP_857146.1;transl_table=11
NC_008570.1	RefSeq	gene	2940413	2941045	.	+	.	ID=gene2635;Dbxref=GeneID:4490096;Name=rnfG;gbkey=Gene;gene=rnfG;gene_biotype=protein_coding;locus_tag=AHA_2638
NC_008570.1	RefSeq	CDS	2940413	2941045	.	+	0	ID=cds2562;Parent=gene2635;Dbxref=Genbank:YP_857147.1,GeneID:4490096;Name=YP_857147.1;Note=identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01947;gbkey=CDS;gene=rnfG;product=RnfABCDGE type electron transport complex subunit G;protein_id=YP_857147.1;transl_table=11
NC_008570.1	RefSeq	gene	2941077	2941820	.	+	.	ID=gene2636;Dbxref=GeneID:4490097;Name=rnfE;gbkey=Gene;gene=rnfE;gene_biotype=protein_coding;locus_tag=AHA_2639
NC_008570.1	RefSeq	CDS	2941077	2941820	.	+	0	ID=cds2563;Parent=gene2636;Dbxref=Genbank:YP_857148.1,GeneID:4490097;Name=YP_857148.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948;gbkey=CDS;gene=rnfE;product=RnfABCDGE type electron transport complex subunit E;protein_id=YP_857148.1;transl_table=11
NC_008570.1	RefSeq	gene	2941835	2942476	.	+	.	ID=gene2637;Dbxref=GeneID:4490098;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AHA_2640
NC_008570.1	RefSeq	CDS	2941835	2942476	.	+	0	ID=cds2564;Parent=gene2637;Dbxref=Genbank:YP_857149.1,GeneID:4490098;Name=YP_857149.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083;gbkey=CDS;gene=nth;product=endonuclease III;protein_id=YP_857149.1;transl_table=11
NC_008570.1	RefSeq	gene	2942609	2943022	.	+	.	ID=gene2638;Dbxref=GeneID:4490099;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AHA_2641
NC_008570.1	RefSeq	CDS	2942609	2943022	.	+	0	ID=cds2565;Parent=gene2638;Dbxref=Genbank:YP_857150.1,GeneID:4490099;Name=YP_857150.1;Note=identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR00068;gbkey=CDS;gene=gloA;product=lactoylglutathione lyase;protein_id=YP_857150.1;transl_table=11
NC_008570.1	RefSeq	gene	2943087	2943950	.	-	.	ID=gene2639;Dbxref=GeneID:4490100;Name=AHA_2642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2642
NC_008570.1	RefSeq	CDS	2943087	2943950	.	-	0	ID=cds2566;Parent=gene2639;Dbxref=Genbank:YP_857151.1,GeneID:4490100;Name=YP_857151.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=sodium-type flagellar protein MotY;protein_id=YP_857151.1;transl_table=11
NC_008570.1	RefSeq	gene	2944031	2945812	.	-	.	ID=gene2640;Dbxref=GeneID:4490101;Name=AHA_2643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2643
NC_008570.1	RefSeq	CDS	2944031	2945812	.	-	0	ID=cds2567;Parent=gene2640;Dbxref=Genbank:YP_857152.1,GeneID:4490101;Name=YP_857152.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis transducer;protein_id=YP_857152.1;transl_table=11
NC_008570.1	RefSeq	gene	2946090	2946812	.	+	.	ID=gene2641;Dbxref=GeneID:4490102;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AHA_2644
NC_008570.1	RefSeq	CDS	2946090	2946812	.	+	0	ID=cds2568;Parent=gene2641;Dbxref=Genbank:YP_857153.1,GeneID:4490102;Name=YP_857153.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;gene=rnt;product=ribonuclease T;protein_id=YP_857153.1;transl_table=11
NC_008570.1	RefSeq	gene	2947060	2948382	.	+	.	ID=gene2642;Dbxref=GeneID:4490103;Name=AHA_2645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2645
NC_008570.1	RefSeq	CDS	2947060	2948382	.	+	0	ID=cds2569;Parent=gene2642;Dbxref=Genbank:YP_857154.1,GeneID:4490103;Name=YP_857154.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;product=gluconate:H+ symporter (GntP) family protein;protein_id=YP_857154.1;transl_table=11
NC_008570.1	RefSeq	gene	2948749	2950677	.	-	.	ID=gene2643;Dbxref=GeneID:4490104;Name=AHA_2646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2646
NC_008570.1	RefSeq	CDS	2948749	2950677	.	-	0	ID=cds2570;Parent=gene2643;Dbxref=Genbank:YP_857155.1,GeneID:4490104;Name=YP_857155.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF03880;gbkey=CDS;product=ATP-dependent RNA helicase;protein_id=YP_857155.1;transl_table=11
NC_008570.1	RefSeq	gene	2950825	2951286	.	-	.	ID=gene2644;Dbxref=GeneID:4490105;Name=AHA_2647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2647
NC_008570.1	RefSeq	CDS	2950825	2951286	.	-	0	ID=cds2571;Parent=gene2644;Dbxref=Genbank:YP_857156.1,GeneID:4490105;Name=YP_857156.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;product=esterase YdiI;protein_id=YP_857156.1;transl_table=11
NC_008570.1	RefSeq	gene	2951413	2951901	.	-	.	ID=gene2645;Dbxref=GeneID:4490106;Name=AHA_2648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2648
NC_008570.1	RefSeq	CDS	2951413	2951901	.	-	0	ID=cds2572;Parent=gene2645;Dbxref=Genbank:YP_857157.1,GeneID:4490106;Name=YP_857157.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857157.1;transl_table=11
NC_008570.1	RefSeq	gene	2951901	2955056	.	-	.	ID=gene2646;Dbxref=GeneID:4490107;Name=AHA_2649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2649
NC_008570.1	RefSeq	CDS	2951901	2955056	.	-	0	ID=cds2573;Parent=gene2646;Dbxref=Genbank:YP_857158.1,GeneID:4490107;Name=YP_857158.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;product=FAD linked oxidase;protein_id=YP_857158.1;transl_table=11
NC_008570.1	RefSeq	gene	2955130	2956056	.	+	.	ID=gene2647;Dbxref=GeneID:4490108;Name=AHA_2650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2650
NC_008570.1	RefSeq	CDS	2955130	2956056	.	+	0	ID=cds2574;Parent=gene2647;Dbxref=Genbank:YP_857159.1,GeneID:4490108;Name=YP_857159.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;product=hypothetical protein;protein_id=YP_857159.1;transl_table=11
NC_008570.1	RefSeq	gene	2956369	2957904	.	+	.	ID=gene2648;Dbxref=GeneID:4490109;Name=AHA_2651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2651
NC_008570.1	RefSeq	CDS	2956369	2957904	.	+	0	ID=cds2575;Parent=gene2648;Dbxref=Genbank:YP_857160.1,GeneID:4490109;Name=YP_857160.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF03471%3B match to protein family HMM PF03741;gbkey=CDS;product=inner membrane protein YoaE;protein_id=YP_857160.1;transl_table=11
NC_008570.1	RefSeq	gene	2958093	2959214	.	+	.	ID=gene2649;Dbxref=GeneID:4490110;Name=AHA_2652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2652
NC_008570.1	RefSeq	CDS	2958093	2959214	.	+	0	ID=cds2576;Parent=gene2649;Dbxref=Genbank:YP_857161.1,GeneID:4490110;Name=YP_857161.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;product=morphinone reductase;protein_id=YP_857161.1;transl_table=11
NC_008570.1	RefSeq	gene	2959303	2960322	.	-	.	ID=gene2650;Dbxref=GeneID:4487634;Name=add-2;gbkey=Gene;gene=add-2;gene_biotype=protein_coding;locus_tag=AHA_2653
NC_008570.1	RefSeq	CDS	2959303	2960322	.	-	0	ID=cds2577;Parent=gene2650;Dbxref=Genbank:YP_857162.1,GeneID:4487634;Name=YP_857162.1;Note=identified by match to protein family HMM PF00962%3B match to protein family HMM TIGR01430;gbkey=CDS;gene=add-2;product=adenosine deaminase;protein_id=YP_857162.1;transl_table=11
NC_008570.1	RefSeq	gene	2960537	2961286	.	+	.	ID=gene2651;Dbxref=GeneID:4487635;Name=AHA_2654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2654
NC_008570.1	RefSeq	CDS	2960537	2961286	.	+	0	ID=cds2578;Parent=gene2651;Dbxref=Genbank:YP_857163.1,GeneID:4487635;Name=YP_857163.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01460;gbkey=CDS;product=UMP phosphatase;protein_id=YP_857163.1;transl_table=11
NC_008570.1	RefSeq	gene	2961356	2962930	.	+	.	ID=gene2652;Dbxref=GeneID:4487636;Name=AHA_2655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2655
NC_008570.1	RefSeq	CDS	2961356	2962930	.	+	0	ID=cds2579;Parent=gene2652;Dbxref=Genbank:YP_857164.1,GeneID:4487636;Name=YP_857164.1;Note=identified by match to protein family HMM PF00999%3B match to protein family HMM PF02254;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=YP_857164.1;transl_table=11
NC_008570.1	RefSeq	gene	2963056	2963424	.	+	.	ID=gene2653;Dbxref=GeneID:4487637;Name=AHA_2656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2656
NC_008570.1	RefSeq	CDS	2963056	2963424	.	+	0	ID=cds2580;Parent=gene2653;Dbxref=Genbank:YP_857165.1,GeneID:4487637;Name=YP_857165.1;Note=identified by match to protein family HMM PF05899;gbkey=CDS;product=transcriptional regulator;protein_id=YP_857165.1;transl_table=11
NC_008570.1	RefSeq	gene	2963618	2965282	.	+	.	ID=gene2654;Dbxref=GeneID:4487638;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AHA_2657
NC_008570.1	RefSeq	CDS	2963618	2965282	.	+	0	ID=cds2581;Parent=gene2654;Dbxref=Genbank:YP_857166.1,GeneID:4487638;Name=YP_857166.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=YP_857166.1;transl_table=11
NC_008570.1	RefSeq	gene	2965462	2965962	.	+	.	ID=gene2655;Dbxref=GeneID:4487639;Name=AHA_2658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2658
NC_008570.1	RefSeq	CDS	2965462	2965962	.	+	0	ID=cds2582;Parent=gene2655;Dbxref=Genbank:YP_857167.1,GeneID:4487639;Name=YP_857167.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857167.1;transl_table=11
NC_008570.1	RefSeq	gene	2966084	2966707	.	+	.	ID=gene2656;Dbxref=GeneID:4487640;Name=AHA_2659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2659
NC_008570.1	RefSeq	CDS	2966084	2966707	.	+	0	ID=cds2583;Parent=gene2656;Dbxref=Genbank:YP_857168.1,GeneID:4487640;Name=YP_857168.1;Note=identified by match to protein family HMM PF02798;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_857168.1;transl_table=11
NC_008570.1	RefSeq	gene	2966786	2967487	.	-	.	ID=gene2657;Dbxref=GeneID:4487641;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=AHA_2660
NC_008570.1	RefSeq	CDS	2966786	2967487	.	-	0	ID=cds2584;Parent=gene2657;Dbxref=Genbank:YP_857169.1,GeneID:4487641;Name=YP_857169.1;Note=identified by match to protein family HMM PF02798%3B match to protein family HMM TIGR01262;gbkey=CDS;gene=maiA;product=maleylacetoacetate isomerase;protein_id=YP_857169.1;transl_table=11
NC_008570.1	RefSeq	gene	2967497	2968495	.	-	.	ID=gene2658;Dbxref=GeneID:4487642;Name=AHA_2661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2661
NC_008570.1	RefSeq	CDS	2967497	2968495	.	-	0	ID=cds2585;Parent=gene2658;Dbxref=Genbank:YP_857170.1,GeneID:4487642;Name=YP_857170.1;Note=identified by match to protein family HMM PF01557;gbkey=CDS;product=fumarylacetoacetate hydrolase family protein;protein_id=YP_857170.1;transl_table=11
NC_008570.1	RefSeq	gene	2968507	2969667	.	-	.	ID=gene2659;Dbxref=GeneID:4487643;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=AHA_2662
NC_008570.1	RefSeq	CDS	2968507	2969667	.	-	0	ID=cds2586;Parent=gene2659;Dbxref=Genbank:YP_857171.1,GeneID:4487643;Name=YP_857171.1;Note=identified by match to protein family HMM PF04209;gbkey=CDS;gene=hmgA;product=homogentisate 1%2C2-dioxygenase;protein_id=YP_857171.1;transl_table=11
NC_008570.1	RefSeq	gene	2969715	2970812	.	-	.	ID=gene2660;Dbxref=GeneID:4487644;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=AHA_2663
NC_008570.1	RefSeq	CDS	2969715	2970812	.	-	0	ID=cds2587;Parent=gene2660;Dbxref=Genbank:YP_857172.1,GeneID:4487644;Name=YP_857172.1;Note=identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR01263;gbkey=CDS;gene=hppD;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=YP_857172.1;transl_table=11
NC_008570.1	RefSeq	gene	2971050	2971718	.	-	.	ID=gene2661;Dbxref=GeneID:4487645;Name=AHA_2664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2664
NC_008570.1	RefSeq	CDS	2971050	2971718	.	-	0	ID=cds2588;Parent=gene2661;Dbxref=Genbank:YP_857173.1,GeneID:4487645;Name=YP_857173.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857173.1;transl_table=11
NC_008570.1	RefSeq	gene	2971715	2972374	.	-	.	ID=gene2662;Dbxref=GeneID:4487646;Name=AHA_2665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2665
NC_008570.1	RefSeq	CDS	2971715	2972374	.	-	0	ID=cds2589;Parent=gene2662;Dbxref=Genbank:YP_857174.1,GeneID:4487646;Name=YP_857174.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR01621;gbkey=CDS;product=pseudouridine synthase;protein_id=YP_857174.1;transl_table=11
NC_008570.1	RefSeq	gene	2972461	2974044	.	+	.	ID=gene2663;Dbxref=GeneID:4487647;Name=AHA_2666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2666
NC_008570.1	RefSeq	CDS	2972461	2974044	.	+	0	ID=cds2590;Parent=gene2663;Dbxref=Genbank:YP_857175.1,GeneID:4487647;Name=YP_857175.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857175.1;transl_table=11
NC_008570.1	RefSeq	gene	2974110	2975663	.	-	.	ID=gene2664;Dbxref=GeneID:4487648;Name=AHA_2667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2667
NC_008570.1	RefSeq	CDS	2974110	2975663	.	-	0	ID=cds2591;Parent=gene2664;Dbxref=Genbank:YP_857176.1,GeneID:4487648;Name=YP_857176.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;product=aerotaxis receptor Aer;protein_id=YP_857176.1;transl_table=11
NC_008570.1	RefSeq	gene	2975821	2976507	.	-	.	ID=gene2665;Dbxref=GeneID:4487649;Name=AHA_2668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2668
NC_008570.1	RefSeq	CDS	2975821	2976507	.	-	0	ID=cds2592;Parent=gene2665;Dbxref=Genbank:YP_857177.1,GeneID:4487649;Name=YP_857177.1;gbkey=CDS;product=virulence protein;protein_id=YP_857177.1;transl_table=11
NC_008570.1	RefSeq	gene	2976517	2979066	.	-	.	ID=gene2666;Dbxref=GeneID:4487650;Name=AHA_2669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2669
NC_008570.1	RefSeq	CDS	2976517	2979066	.	-	0	ID=cds2593;Parent=gene2666;Dbxref=Genbank:YP_857178.1,GeneID:4487650;Name=YP_857178.1;Note=identified by match to protein family HMM PF04329%3B match to protein family HMM PF04330%3B match to protein family HMM PF04331;gbkey=CDS;product=hypothetical protein;protein_id=YP_857178.1;transl_table=11
NC_008570.1	RefSeq	gene	2979544	2981169	.	-	.	ID=gene2667;Dbxref=GeneID:4487651;Name=AHA_2670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2670
NC_008570.1	RefSeq	CDS	2979544	2981169	.	-	0	ID=cds2594;Parent=gene2667;Dbxref=Genbank:YP_857179.1,GeneID:4487651;Name=YP_857179.1;Note=identified by match to protein family HMM PF00884%3B match to protein family HMM PF08019;gbkey=CDS;product=sulfatase;protein_id=YP_857179.1;transl_table=11
NC_008570.1	RefSeq	gene	2981550	2982329	.	+	.	ID=gene2668;Dbxref=GeneID:4487652;Name=AHA_2671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2671
NC_008570.1	RefSeq	CDS	2981550	2982329	.	+	0	ID=cds2595;Parent=gene2668;Dbxref=Genbank:YP_857180.1,GeneID:4487652;Name=YP_857180.1;Note=identified by match to protein family HMM PF03988;gbkey=CDS;product=hypothetical protein;protein_id=YP_857180.1;transl_table=11
NC_008570.1	RefSeq	gene	2982415	2983629	.	+	.	ID=gene2669;Dbxref=GeneID:4490649;Name=AHA_2672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2672
NC_008570.1	RefSeq	CDS	2982415	2983629	.	+	0	ID=cds2596;Parent=gene2669;Dbxref=Genbank:YP_857181.1,GeneID:4490649;Name=YP_857181.1;Note=identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_857181.1;transl_table=11
NC_008570.1	RefSeq	gene	2983700	2983787	.	-	.	ID=gene2670;Dbxref=GeneID:4490650;Name=AHA_2673;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2673
NC_008570.1	RefSeq	tRNA	2983700	2983787	.	-	.	ID=rna70;Parent=gene2670;Dbxref=GeneID:4490650;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	2983700	2983787	.	-	.	ID=id71;Parent=rna70;Dbxref=GeneID:4490650;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	2983971	2984627	.	+	.	ID=gene2671;Dbxref=GeneID:4490651;Name=AHA_2674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2674
NC_008570.1	RefSeq	CDS	2983971	2984627	.	+	0	ID=cds2597;Parent=gene2671;Dbxref=Genbank:YP_857182.1,GeneID:4490651;Name=YP_857182.1;Note=identified by match to protein family HMM PF01027;gbkey=CDS;product=hypothetical protein;protein_id=YP_857182.1;transl_table=11
NC_008570.1	RefSeq	gene	2984791	2986944	.	+	.	ID=gene2672;Dbxref=GeneID:4490652;Name=AHA_2675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2675
NC_008570.1	RefSeq	CDS	2984791	2986944	.	+	0	ID=cds2598;Parent=gene2672;Dbxref=Genbank:YP_857183.1,GeneID:4490652;Name=YP_857183.1;Note=identified by match to protein family HMM PF05976%3B match to protein family HMM TIGR01666%3B match to protein family HMM TIGR01667;gbkey=CDS;product=hypothetical protein;protein_id=YP_857183.1;transl_table=11
NC_008570.1	RefSeq	gene	2986965	2987309	.	+	.	ID=gene2673;Dbxref=GeneID:4490653;Name=AHA_2676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2676
NC_008570.1	RefSeq	CDS	2986965	2987309	.	+	0	ID=cds2599;Parent=gene2673;Dbxref=Genbank:YP_857184.1,GeneID:4490653;Name=YP_857184.1;Note=identified by match to protein family HMM PF04358;gbkey=CDS;product=dissimilatory sulfite reductase subunit gamma;protein_id=YP_857184.1;transl_table=11
NC_008570.1	RefSeq	gene	2987367	2988167	.	-	.	ID=gene2674;Dbxref=GeneID:4490654;Name=AHA_2677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2677
NC_008570.1	RefSeq	CDS	2987367	2988167	.	-	0	ID=cds2600;Parent=gene2674;Dbxref=Genbank:YP_857185.1,GeneID:4490654;Name=YP_857185.1;Note=identified by match to protein family HMM PF05036;gbkey=CDS;product=protein DedD;protein_id=YP_857185.1;transl_table=11
NC_008570.1	RefSeq	gene	2988242	2989489	.	-	.	ID=gene2675;Dbxref=GeneID:4490655;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AHA_2678
NC_008570.1	RefSeq	CDS	2988242	2989489	.	-	0	ID=cds2601;Parent=gene2675;Dbxref=Genbank:YP_857186.1,GeneID:4490655;Name=YP_857186.1;Note=identified by similarity to SP:P08192%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01499;gbkey=CDS;gene=folC;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=YP_857186.1;transl_table=11
NC_008570.1	RefSeq	gene	2989504	2990367	.	-	.	ID=gene2676;Dbxref=GeneID:4490656;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AHA_2679
NC_008570.1	RefSeq	CDS	2989504	2990367	.	-	0	ID=cds2602;Parent=gene2676;Dbxref=Genbank:YP_857187.1,GeneID:4490656;Name=YP_857187.1;Note=identified by match to protein family HMM TIGR00515;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase%2C carboxyl transferase subunit beta;protein_id=YP_857187.1;transl_table=11
NC_008570.1	RefSeq	gene	2990487	2991296	.	-	.	ID=gene2677;Dbxref=GeneID:4490657;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AHA_2680
NC_008570.1	RefSeq	CDS	2990487	2991296	.	-	0	ID=cds2603;Parent=gene2677;Dbxref=Genbank:YP_857188.1,GeneID:4490657;Name=YP_857188.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=YP_857188.1;transl_table=11
NC_008570.1	RefSeq	gene	2991476	2993674	.	-	.	ID=gene2678;Dbxref=GeneID:4490658;Name=AHA_2681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2681
NC_008570.1	RefSeq	CDS	2991476	2993674	.	-	0	ID=cds2604;Parent=gene2678;Dbxref=Genbank:YP_857189.1,GeneID:4490658;Name=YP_857189.1;gbkey=CDS;product=motility protein FimV;protein_id=YP_857189.1;transl_table=11
NC_008570.1	RefSeq	gene	2993950	2994966	.	-	.	ID=gene2679;Dbxref=GeneID:4490659;Name=asd-2;gbkey=Gene;gene=asd-2;gene_biotype=protein_coding;locus_tag=AHA_2682
NC_008570.1	RefSeq	CDS	2993950	2994966	.	-	0	ID=cds2605;Parent=gene2679;Dbxref=Genbank:YP_857190.1,GeneID:4490659;Name=YP_857190.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296;gbkey=CDS;gene=asd-2;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_857190.1;transl_table=11
NC_008570.1	RefSeq	gene	2995109	2996239	.	-	.	ID=gene2680;Dbxref=GeneID:4490660;Name=AHA_2683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2683
NC_008570.1	RefSeq	CDS	2995109	2996239	.	-	0	ID=cds2606;Parent=gene2680;Dbxref=Genbank:YP_857191.1,GeneID:4490660;Name=YP_857191.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=YP_857191.1;transl_table=11
NC_008570.1	RefSeq	gene	2996562	2997308	.	+	.	ID=gene2681;Dbxref=GeneID:4490661;Name=AHA_2684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2684
NC_008570.1	RefSeq	CDS	2996562	2997308	.	+	0	ID=cds2607;Parent=gene2681;Dbxref=Genbank:YP_857192.1,GeneID:4490661;Name=YP_857192.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=YP_857192.1;transl_table=11
NC_008570.1	RefSeq	gene	2997380	2998210	.	-	.	ID=gene2682;Dbxref=GeneID:4490662;Name=AHA_2685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2685
NC_008570.1	RefSeq	CDS	2997380	2998210	.	-	0	ID=cds2608;Parent=gene2682;Dbxref=Genbank:YP_857193.1,GeneID:4490662;Name=YP_857193.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_857193.1;transl_table=11
NC_008570.1	RefSeq	gene	2998447	2998986	.	+	.	ID=gene2683;Dbxref=GeneID:4490663;Name=AHA_2686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2686
NC_008570.1	RefSeq	CDS	2998447	2998986	.	+	0	ID=cds2609;Parent=gene2683;Dbxref=Genbank:YP_857194.1,GeneID:4490663;Name=YP_857194.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=YP_857194.1;transl_table=11
NC_008570.1	RefSeq	gene	2999464	3001338	.	+	.	ID=gene2684;Dbxref=GeneID:4490664;Name=AHA_2687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2687
NC_008570.1	RefSeq	CDS	2999464	3001338	.	+	0	ID=cds2610;Parent=gene2684;Dbxref=Genbank:YP_857195.1,GeneID:4490664;Name=YP_857195.1;Note=identified by match to protein family HMM PF00082%3B match to protein family HMM PF01483;gbkey=CDS;product=serine proteinase;protein_id=YP_857195.1;transl_table=11
NC_008570.1	RefSeq	gene	3001356	3001814	.	+	.	ID=gene2685;Dbxref=GeneID:4490665;Name=AHA_2688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2688
NC_008570.1	RefSeq	CDS	3001356	3001814	.	+	0	ID=cds2611;Parent=gene2685;Dbxref=Genbank:YP_857196.1,GeneID:4490665;Name=YP_857196.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857196.1;transl_table=11
NC_008570.1	RefSeq	gene	3001952	3004618	.	+	.	ID=gene2686;Dbxref=GeneID:4490666;Name=AHA_2689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2689
NC_008570.1	RefSeq	CDS	3001952	3004618	.	+	0	ID=cds2612;Parent=gene2686;Dbxref=Genbank:YP_857197.1,GeneID:4490666;Name=YP_857197.1;Note=identified by match to protein family HMM PF00933%3B match to protein family HMM PF01915;gbkey=CDS;product=beta-glucosidase;protein_id=YP_857197.1;transl_table=11
NC_008570.1	RefSeq	gene	3004713	3006098	.	-	.	ID=gene2687;Dbxref=GeneID:4490667;Name=AHA_2690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2690
NC_008570.1	RefSeq	CDS	3004713	3006098	.	-	0	ID=cds2613;Parent=gene2687;Dbxref=Genbank:YP_857198.1,GeneID:4490667;Name=YP_857198.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_857198.1;transl_table=11
NC_008570.1	RefSeq	gene	3005995	3008367	.	-	.	ID=gene2688;Dbxref=GeneID:4490668;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AHA_2691
NC_008570.1	RefSeq	CDS	3005995	3008367	.	-	0	ID=cds2614;Parent=gene2688;Dbxref=Genbank:YP_857199.1,GeneID:4490668;Name=YP_857199.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=ppsA;product=phosphoenolpyruvate synthase;protein_id=YP_857199.1;transl_table=11
NC_008570.1	RefSeq	gene	3008682	3009494	.	+	.	ID=gene2689;Dbxref=GeneID:4489970;Name=AHA_2692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2692
NC_008570.1	RefSeq	CDS	3008682	3009494	.	+	0	ID=cds2615;Parent=gene2689;Dbxref=Genbank:YP_857200.1,GeneID:4489970;Name=YP_857200.1;Note=identified by similarity to SP:Q8EDU8%3B match to protein family HMM PF03618;gbkey=CDS;product=hypothetical protein;protein_id=YP_857200.1;transl_table=11
NC_008570.1	RefSeq	gene	3009584	3009871	.	-	.	ID=gene2690;Dbxref=GeneID:4489971;Name=AHA_2693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2693
NC_008570.1	RefSeq	CDS	3009584	3009871	.	-	0	ID=cds2616;Parent=gene2690;Dbxref=Genbank:YP_857201.1,GeneID:4489971;Name=YP_857201.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857201.1;transl_table=11
NC_008570.1	RefSeq	gene	3010234	3011610	.	+	.	ID=gene2691;Dbxref=GeneID:4489972;Name=AHA_2694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2694
NC_008570.1	RefSeq	CDS	3010234	3011610	.	+	0	ID=cds2617;Parent=gene2691;Dbxref=Genbank:YP_857202.1,GeneID:4489972;Name=YP_857202.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=aromatic amino acid transport protein AroP;protein_id=YP_857202.1;transl_table=11
NC_008570.1	RefSeq	gene	3011858	3012577	.	-	.	ID=gene2692;Dbxref=GeneID:4489973;Name=AHA_2695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2695
NC_008570.1	RefSeq	CDS	3011858	3012577	.	-	0	ID=cds2618;Parent=gene2692;Dbxref=Genbank:YP_857203.1,GeneID:4489973;Name=YP_857203.1;Note=identified by match to protein family HMM PF04402;gbkey=CDS;product=hypothetical protein;protein_id=YP_857203.1;transl_table=11
NC_008570.1	RefSeq	gene	3012619	3013176	.	-	.	ID=gene2693;Dbxref=GeneID:4489974;Name=AHA_2696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2696
NC_008570.1	RefSeq	CDS	3012619	3013176	.	-	0	ID=cds2619;Parent=gene2693;Dbxref=Genbank:YP_857204.1,GeneID:4489974;Name=YP_857204.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857204.1;transl_table=11
NC_008570.1	RefSeq	gene	3013263	3026045	.	-	.	ID=gene2694;Dbxref=GeneID:4489975;Name=AHA_2697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2697
NC_008570.1	RefSeq	CDS	3013263	3026045	.	-	0	ID=cds2620;Parent=gene2694;Dbxref=Genbank:YP_857205.1,GeneID:4489975;Name=YP_857205.1;Note=identified by similarity to GB:CAH14915.1%3B match to protein family HMM PF00092%3B match to protein family HMM PF00353;gbkey=CDS;product=structural toxin protein RtxA;protein_id=YP_857205.1;transl_table=11
NC_008570.1	RefSeq	gene	3026202	3028127	.	-	.	ID=gene2695;Dbxref=GeneID:4489976;Name=AHA_2698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2698
NC_008570.1	RefSeq	CDS	3026202	3028127	.	-	0	ID=cds2621;Parent=gene2695;Dbxref=Genbank:YP_857206.1,GeneID:4489976;Name=YP_857206.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00672%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase/phosphodiesterase;protein_id=YP_857206.1;transl_table=11
NC_008570.1	RefSeq	gene	3029012	3030340	.	-	.	ID=gene2696;Dbxref=GeneID:4489977;Name=AHA_2699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2699
NC_008570.1	RefSeq	CDS	3029012	3030340	.	-	0	ID=cds2622;Parent=gene2696;Dbxref=Genbank:YP_857207.1,GeneID:4489977;Name=YP_857207.1;Note=identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01844;gbkey=CDS;product=agglutination protein;protein_id=YP_857207.1;transl_table=11
NC_008570.1	RefSeq	gene	3030376	3031794	.	-	.	ID=gene2697;Dbxref=GeneID:4489978;Name=AHA_2700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2700
NC_008570.1	RefSeq	CDS	3030376	3031794	.	-	0	ID=cds2623;Parent=gene2697;Dbxref=Genbank:YP_857208.1,GeneID:4489978;Name=YP_857208.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01843;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_857208.1;transl_table=11
NC_008570.1	RefSeq	gene	3031787	3033931	.	-	.	ID=gene2698;Dbxref=GeneID:4489979;Name=AHA_2701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2701
NC_008570.1	RefSeq	CDS	3031787	3033931	.	-	0	ID=cds2624;Parent=gene2698;Dbxref=Genbank:YP_857209.1,GeneID:4489979;Name=YP_857209.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=toxin secretion ATP-binding protein;protein_id=YP_857209.1;transl_table=11
NC_008570.1	RefSeq	gene	3034335	3035270	.	-	.	ID=gene2699;Dbxref=GeneID:4489980;Name=AHA_2702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2702
NC_008570.1	RefSeq	CDS	3034335	3035270	.	-	0	ID=cds2625;Parent=gene2699;Dbxref=Genbank:YP_857210.1,GeneID:4489980;Name=YP_857210.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212;gbkey=CDS;product=radical SAM protein;protein_id=YP_857210.1;transl_table=11
NC_008570.1	RefSeq	gene	3035884	3040341	.	+	.	ID=gene2700;Dbxref=GeneID:4489981;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AHA_2703
NC_008570.1	RefSeq	CDS	3035884	3040341	.	+	0	ID=cds2626;Parent=gene2700;Dbxref=Genbank:YP_857211.1,GeneID:4489981;Name=YP_857211.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=YP_857211.1;transl_table=11
NC_008570.1	RefSeq	gene	3040354	3041769	.	+	.	ID=gene2701;Dbxref=GeneID:4489982;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AHA_2704
NC_008570.1	RefSeq	CDS	3040354	3041769	.	+	0	ID=cds2627;Parent=gene2701;Dbxref=Genbank:YP_857212.1,GeneID:4489982;Name=YP_857212.1;Note=glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate;gbkey=CDS;gene=gltD;product=glutamate synthase subunit beta;protein_id=YP_857212.1;transl_table=11
NC_008570.1	RefSeq	gene	3041856	3042617	.	-	.	ID=gene2702;Dbxref=GeneID:4489983;Name=AHA_2705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2705
NC_008570.1	RefSeq	CDS	3041856	3042617	.	-	0	ID=cds2628;Parent=gene2702;Dbxref=Genbank:YP_857213.1,GeneID:4489983;Name=YP_857213.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=YP_857213.1;transl_table=11
NC_008570.1	RefSeq	gene	3042614	3043291	.	-	.	ID=gene2703;Dbxref=GeneID:4489984;Name=AHA_2706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2706
NC_008570.1	RefSeq	CDS	3042614	3043291	.	-	0	ID=cds2629;Parent=gene2703;Dbxref=Genbank:YP_857214.1,GeneID:4489984;Name=YP_857214.1;Note=identified by similarity to SP:P42200%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=L-cystine ABC transporter permease;protein_id=YP_857214.1;transl_table=11
NC_008570.1	RefSeq	gene	3043328	3044101	.	-	.	ID=gene2704;Dbxref=GeneID:4489985;Name=AHA_2707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2707
NC_008570.1	RefSeq	CDS	3043328	3044101	.	-	0	ID=cds2630;Parent=gene2704;Dbxref=Genbank:YP_857215.1,GeneID:4489985;Name=YP_857215.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_857215.1;transl_table=11
NC_008570.1	RefSeq	gene	3044369	3044779	.	-	.	ID=gene2705;Dbxref=GeneID:4489986;Name=AHA_2708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2708
NC_008570.1	RefSeq	CDS	3044369	3044779	.	-	0	ID=cds2631;Parent=gene2705;Dbxref=Genbank:YP_857216.1,GeneID:4489986;Name=YP_857216.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857216.1;transl_table=11
NC_008570.1	RefSeq	gene	3044789	3045367	.	-	.	ID=gene2706;Dbxref=GeneID:4489987;Name=AHA_2709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2709
NC_008570.1	RefSeq	CDS	3044789	3045367	.	-	0	ID=cds2632;Parent=gene2706;Dbxref=Genbank:YP_857217.1,GeneID:4489987;Name=YP_857217.1;Note=identified by match to protein family HMM PF01596;gbkey=CDS;product=O-methyltransferase;protein_id=YP_857217.1;transl_table=11
NC_008570.1	RefSeq	gene	3045436	3045903	.	-	.	ID=gene2707;Dbxref=GeneID:4489988;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AHA_2710
NC_008570.1	RefSeq	CDS	3045436	3045903	.	-	0	ID=cds2633;Parent=gene2707;Dbxref=Genbank:YP_857218.1,GeneID:4489988;Name=YP_857218.1;Note=identified by match to protein family HMM PF00376%3B match to protein family HMM TIGR01950;gbkey=CDS;gene=soxR;product=redox-sensitive transcriptional activator SoxR;protein_id=YP_857218.1;transl_table=11
NC_008570.1	RefSeq	gene	3045976	3046968	.	+	.	ID=gene2708;Dbxref=GeneID:4486920;Name=AHA_2711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2711
NC_008570.1	RefSeq	CDS	3045976	3046968	.	+	0	ID=cds2634;Parent=gene2708;Dbxref=Genbank:YP_857219.1,GeneID:4486920;Name=YP_857219.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857219.1;transl_table=11
NC_008570.1	RefSeq	gene	3046988	3047419	.	-	.	ID=gene2709;Dbxref=GeneID:4486921;Name=AHA_2712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2712
NC_008570.1	RefSeq	CDS	3046988	3047419	.	-	0	ID=cds2635;Parent=gene2709;Dbxref=Genbank:YP_857220.1,GeneID:4486921;Name=YP_857220.1;gbkey=CDS;product=extracellular protease;protein_id=YP_857220.1;transl_table=11
NC_008570.1	RefSeq	gene	3047487	3048527	.	-	.	ID=gene2710;Dbxref=GeneID:4486922;Name=AHA_2713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2713
NC_008570.1	RefSeq	CDS	3047487	3048527	.	-	0	ID=cds2636;Parent=gene2710;Dbxref=Genbank:YP_857221.1,GeneID:4486922;Name=YP_857221.1;Note=identified by match to protein family HMM PF02102;gbkey=CDS;product=extracellular protease;protein_id=YP_857221.1;transl_table=11
NC_008570.1	RefSeq	gene	3048800	3049438	.	-	.	ID=gene2711;Dbxref=GeneID:4486923;Name=AHA_2714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2714
NC_008570.1	RefSeq	CDS	3048800	3049438	.	-	0	ID=cds2637;Parent=gene2711;Dbxref=Genbank:YP_857222.1,GeneID:4486923;Name=YP_857222.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857222.1;transl_table=11
NC_008570.1	RefSeq	gene	3049538	3050764	.	-	.	ID=gene2712;Dbxref=GeneID:4486924;Name=AHA_2715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2715
NC_008570.1	RefSeq	CDS	3049538	3050764	.	-	0	ID=cds2638;Parent=gene2712;Dbxref=Genbank:YP_857223.1,GeneID:4486924;Name=YP_857223.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_857223.1;transl_table=11
NC_008570.1	RefSeq	gene	3051085	3051618	.	-	.	ID=gene2713;Dbxref=GeneID:4486925;Name=AHA_2716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2716
NC_008570.1	RefSeq	CDS	3051085	3051618	.	-	0	ID=cds2639;Parent=gene2713;Dbxref=Genbank:YP_857224.1,GeneID:4486925;Name=YP_857224.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=YP_857224.1;transl_table=11
NC_008570.1	RefSeq	gene	3051718	3052368	.	-	.	ID=gene2714;Dbxref=GeneID:4486926;Name=AHA_2717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2717
NC_008570.1	RefSeq	CDS	3051718	3052368	.	-	0	ID=cds2640;Parent=gene2714;Dbxref=Genbank:YP_857225.1,GeneID:4486926;Name=YP_857225.1;gbkey=CDS;product=inner membrane protein YqjA;protein_id=YP_857225.1;transl_table=11
NC_008570.1	RefSeq	gene	3052599	3054182	.	-	.	ID=gene2715;Dbxref=GeneID:4486927;Name=AHA_2718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2718
NC_008570.1	RefSeq	CDS	3052599	3054182	.	-	0	ID=cds2641;Parent=gene2715;Dbxref=Genbank:YP_857226.1,GeneID:4486927;Name=YP_857226.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF01590%3B match to protein family HMM PF05228;gbkey=CDS;product=CHASE4 domain-contain protein;protein_id=YP_857226.1;transl_table=11
NC_008570.1	RefSeq	gene	3054404	3055360	.	+	.	ID=gene2716;Dbxref=GeneID:4486928;Name=AHA_2719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2719
NC_008570.1	RefSeq	CDS	3054404	3055360	.	+	0	ID=cds2642;Parent=gene2716;Dbxref=Genbank:YP_857227.1,GeneID:4486928;Name=YP_857227.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857227.1;transl_table=11
NC_008570.1	RefSeq	gene	3055495	3056451	.	+	.	ID=gene2717;Dbxref=GeneID:4486929;Name=AHA_2720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2720
NC_008570.1	RefSeq	CDS	3055495	3056451	.	+	0	ID=cds2643;Parent=gene2717;Dbxref=Genbank:YP_857228.1,GeneID:4486929;Name=YP_857228.1;Note=identified by match to protein family HMM PF01396;gbkey=CDS;product=DNA-binding protein;protein_id=YP_857228.1;transl_table=11
NC_008570.1	RefSeq	gene	3057209	3058462	.	-	.	ID=gene2718;Dbxref=GeneID:4486930;Name=AHA_2721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2721
NC_008570.1	RefSeq	CDS	3057209	3058462	.	-	0	ID=cds2644;Parent=gene2718;Dbxref=Genbank:YP_857229.1,GeneID:4486930;Name=YP_857229.1;Note=identified by match to protein family HMM PF07759;gbkey=CDS;product=hypothetical protein;protein_id=YP_857229.1;transl_table=11
NC_008570.1	RefSeq	gene	3058555	3060213	.	-	.	ID=gene2719;Dbxref=GeneID:4486931;Name=leuA-2;gbkey=Gene;gene=leuA-2;gene_biotype=protein_coding;locus_tag=AHA_2722
NC_008570.1	RefSeq	CDS	3058555	3060213	.	-	0	ID=cds2645;Parent=gene2719;Dbxref=Genbank:YP_857230.1,GeneID:4486931;Name=YP_857230.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM TIGR00970;gbkey=CDS;gene=leuA-2;product=2-isopropylmalate synthase;protein_id=YP_857230.1;transl_table=11
NC_008570.1	RefSeq	gene	3060699	3063935	.	-	.	ID=gene2720;Dbxref=GeneID:4486932;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AHA_2723
NC_008570.1	RefSeq	CDS	3060699	3063935	.	-	0	ID=cds2646;Parent=gene2720;Dbxref=Genbank:YP_857231.1,GeneID:4486932;Name=YP_857231.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=YP_857231.1;transl_table=11
NC_008570.1	RefSeq	gene	3063952	3065088	.	-	.	ID=gene2721;Dbxref=GeneID:4486933;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AHA_2724
NC_008570.1	RefSeq	CDS	3063952	3065088	.	-	0	ID=cds2647;Parent=gene2721;Dbxref=Genbank:YP_857232.1,GeneID:4486933;Name=YP_857232.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=CDS;gene=carA;product=carbamoyl-phosphate synthase small subunit;protein_id=YP_857232.1;transl_table=11
NC_008570.1	RefSeq	gene	3065777	3066589	.	-	.	ID=gene2722;Dbxref=GeneID:4486934;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AHA_2725
NC_008570.1	RefSeq	CDS	3065777	3066589	.	-	0	ID=cds2648;Parent=gene2722;Dbxref=Genbank:YP_857233.2,GeneID:4486934;Name=YP_857233.2;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=YP_857233.2;transl_table=11
NC_008570.1	RefSeq	gene	3066900	3068234	.	+	.	ID=gene2723;Dbxref=GeneID:4486935;Name=AHA_2726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2726
NC_008570.1	RefSeq	CDS	3066900	3068234	.	+	0	ID=cds2649;Parent=gene2723;Dbxref=Genbank:YP_857234.1,GeneID:4486935;Name=YP_857234.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;product=Na+/H+ antiporter family protein;protein_id=YP_857234.1;transl_table=11
NC_008570.1	RefSeq	gene	3068367	3068966	.	+	.	ID=gene2724;Dbxref=GeneID:4486936;Name=AHA_2727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2727
NC_008570.1	RefSeq	CDS	3068367	3068966	.	+	0	ID=cds2650;Parent=gene2724;Dbxref=Genbank:YP_857235.1,GeneID:4486936;Name=YP_857235.1;Note=identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727;gbkey=CDS;product=5%2C10-methenyltetrahydrofolate synthetase;protein_id=YP_857235.1;transl_table=11
NC_008570.1	RefSeq	gene	3069152	3069805	.	+	.	ID=gene2725;Dbxref=GeneID:4486937;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AHA_2728
NC_008570.1	RefSeq	CDS	3069152	3069805	.	+	0	ID=cds2651;Parent=gene2725;Dbxref=Genbank:YP_857236.1,GeneID:4486937;Name=YP_857236.1;Note=Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;gene=rpiA;product=ribose-5-phosphate isomerase A;protein_id=YP_857236.1;transl_table=11
NC_008570.1	RefSeq	gene	3069808	3069927	.	+	.	ID=gene2726;Dbxref=GeneID:4486938;Name=AHA_2729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2729
NC_008570.1	RefSeq	CDS	3069808	3069927	.	+	0	ID=cds2652;Parent=gene2726;Dbxref=Genbank:YP_857237.1,GeneID:4486938;Name=YP_857237.1;gbkey=CDS;product=ribose-5-phosphate isomerase A;protein_id=YP_857237.1;transl_table=11
NC_008570.1	RefSeq	gene	3069896	3070048	.	+	.	ID=gene2727;Dbxref=GeneID:4486939;Name=AHA_2730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2730
NC_008570.1	RefSeq	CDS	3069896	3070048	.	+	0	ID=cds2653;Parent=gene2727;Dbxref=Genbank:YP_857238.1,GeneID:4486939;Name=YP_857238.1;gbkey=CDS;product=ribose-5-phosphate isomerase A;protein_id=YP_857238.1;transl_table=11
NC_008570.1	RefSeq	gene	3070152	3071489	.	+	.	ID=gene2728;Dbxref=GeneID:4487861;Name=AHA_2731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2731
NC_008570.1	RefSeq	CDS	3070152	3071489	.	+	0	ID=cds2654;Parent=gene2728;Dbxref=Genbank:YP_857239.1,GeneID:4487861;Name=YP_857239.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_857239.1;transl_table=11
NC_008570.1	RefSeq	gene	3071696	3072076	.	-	.	ID=gene2729;Dbxref=GeneID:4487862;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AHA_2732
NC_008570.1	RefSeq	CDS	3071696	3072076	.	-	0	ID=cds2655;Parent=gene2729;Dbxref=Genbank:YP_857240.1,GeneID:4487862;Name=YP_857240.1;Note=identified by match to protein family HMM PF01219;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=YP_857240.1;transl_table=11
NC_008570.1	RefSeq	gene	3072232	3073296	.	+	.	ID=gene2730;Dbxref=GeneID:4487863;Name=AHA_2733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2733
NC_008570.1	RefSeq	CDS	3072232	3073296	.	+	0	ID=cds2656;Parent=gene2730;Dbxref=Genbank:YP_857241.2,GeneID:4487863;Name=YP_857241.2;Note=tryptophan sensitive%3B catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_857241.2;transl_table=11
NC_008570.1	RefSeq	gene	3073303	3073761	.	+	.	ID=gene2731;Dbxref=GeneID:4487864;Name=AHA_2734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2734
NC_008570.1	RefSeq	CDS	3073303	3073761	.	+	0	ID=cds2657;Parent=gene2731;Dbxref=Genbank:YP_857242.1,GeneID:4487864;Name=YP_857242.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=aminoglycoside 6'-N-acetyltransferase Iz;protein_id=YP_857242.1;transl_table=11
NC_008570.1	RefSeq	gene	3073783	3074532	.	-	.	ID=gene2732;Dbxref=GeneID:4487865;Name=AHA_2735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2735
NC_008570.1	RefSeq	CDS	3073783	3074532	.	-	0	ID=cds2658;Parent=gene2732;Dbxref=Genbank:YP_857243.1,GeneID:4487865;Name=YP_857243.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=vitamin B12 import ATP-binding protein BtuD;protein_id=YP_857243.1;transl_table=11
NC_008570.1	RefSeq	gene	3074555	3075562	.	-	.	ID=gene2733;Dbxref=GeneID:4487866;Name=AHA_2736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2736
NC_008570.1	RefSeq	CDS	3074555	3075562	.	-	0	ID=cds2659;Parent=gene2733;Dbxref=Genbank:YP_857244.1,GeneID:4487866;Name=YP_857244.1;Note=with BtuD and BtuF transports vitamin B12 into the cell;gbkey=CDS;product=vtamin B12-transporter permease;protein_id=YP_857244.1;transl_table=11
NC_008570.1	RefSeq	gene	3075663	3076394	.	-	.	ID=gene2734;Dbxref=GeneID:4487867;Name=AHA_2737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2737
NC_008570.1	RefSeq	CDS	3075663	3076394	.	-	0	ID=cds2660;Parent=gene2734;Dbxref=Genbank:YP_857245.1,GeneID:4487867;Name=YP_857245.1;gbkey=CDS;product=extracellular solute-binding protein;protein_id=YP_857245.1;transl_table=11
NC_008570.1	RefSeq	gene	3076508	3076864	.	+	.	ID=gene2735;Dbxref=GeneID:4487868;Name=AHA_2738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2738
NC_008570.1	RefSeq	CDS	3076508	3076864	.	+	0	ID=cds2661;Parent=gene2735;Dbxref=Genbank:YP_857246.1,GeneID:4487868;Name=YP_857246.1;Note=identified by match to protein family HMM PF04342;gbkey=CDS;product=transmembrane signal peptide protein;protein_id=YP_857246.1;transl_table=11
NC_008570.1	RefSeq	gene	3076925	3078064	.	+	.	ID=gene2736;Dbxref=GeneID:4487869;Name=AHA_2739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2739
NC_008570.1	RefSeq	CDS	3076925	3078064	.	+	0	ID=cds2662;Parent=gene2736;Dbxref=Genbank:YP_857247.1,GeneID:4487869;Name=YP_857247.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420;gbkey=CDS;product=pilus retraction protein PilT;protein_id=YP_857247.1;transl_table=11
NC_008570.1	RefSeq	gene	3078348	3079619	.	+	.	ID=gene2737;Dbxref=GeneID:4487870;Name=glgC-2;gbkey=Gene;gene=glgC-2;gene_biotype=protein_coding;locus_tag=AHA_2740
NC_008570.1	RefSeq	CDS	3078348	3079619	.	+	0	ID=cds2663;Parent=gene2737;Dbxref=Genbank:YP_857248.1,GeneID:4487870;Name=YP_857248.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091;gbkey=CDS;gene=glgC-2;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_857248.1;transl_table=11
NC_008570.1	RefSeq	gene	3079686	3080234	.	+	.	ID=gene2738;Dbxref=GeneID:4487871;Name=AHA_2741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2741
NC_008570.1	RefSeq	CDS	3079686	3080234	.	+	0	ID=cds2664;Parent=gene2738;Dbxref=Genbank:YP_857249.1,GeneID:4487871;Name=YP_857249.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857249.1;transl_table=11
NC_008570.1	RefSeq	gene	3080349	3080591	.	-	.	ID=gene2739;Dbxref=GeneID:4487872;Name=AHA_2742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2742
NC_008570.1	RefSeq	CDS	3080349	3080591	.	-	0	ID=cds2665;Parent=gene2739;Dbxref=Genbank:YP_857250.1,GeneID:4487872;Name=YP_857250.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_857250.1;transl_table=11
NC_008570.1	RefSeq	gene	3080588	3082861	.	-	.	ID=gene2740;Dbxref=GeneID:4487873;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AHA_2743
NC_008570.1	RefSeq	CDS	3080588	3082861	.	-	0	ID=cds2666;Parent=gene2740;Dbxref=Genbank:YP_857251.1,GeneID:4487873;Name=YP_857251.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437;gbkey=CDS;gene=feoB;product=ferrous iron transport protein B;protein_id=YP_857251.1;transl_table=11
NC_008570.1	RefSeq	gene	3082917	3083144	.	-	.	ID=gene2741;Dbxref=GeneID:4487874;Name=AHA_2744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2744
NC_008570.1	RefSeq	CDS	3082917	3083144	.	-	0	ID=cds2667;Parent=gene2741;Dbxref=Genbank:YP_857252.1,GeneID:4487874;Name=YP_857252.1;Note=identified by match to protein family HMM PF04023;gbkey=CDS;product=hypothetical protein;protein_id=YP_857252.1;transl_table=11
NC_008570.1	RefSeq	gene	3083219	3083593	.	+	.	ID=gene2742;Dbxref=GeneID:4487875;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AHA_2745
NC_008570.1	RefSeq	CDS	3083219	3083593	.	+	0	ID=cds2668;Parent=gene2742;Dbxref=Genbank:YP_857253.1,GeneID:4487875;Name=YP_857253.1;Note=identified by match to protein family HMM PF01253;gbkey=CDS;gene=yciH;product=translation initation factor SUI1;protein_id=YP_857253.1;transl_table=11
NC_008570.1	RefSeq	gene	3083850	3084407	.	+	.	ID=gene2743;Dbxref=GeneID:4487876;Name=AHA_2746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2746
NC_008570.1	RefSeq	CDS	3083850	3084407	.	+	0	ID=cds2669;Parent=gene2743;Dbxref=Genbank:YP_857254.1,GeneID:4487876;Name=YP_857254.1;Note=identified by match to protein family HMM PF01169;gbkey=CDS;product=integral membrane protein;protein_id=YP_857254.1;transl_table=11
NC_008570.1	RefSeq	gene	3084439	3085548	.	+	.	ID=gene2744;Dbxref=GeneID:4487877;Name=AHA_2747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2747
NC_008570.1	RefSeq	CDS	3084439	3085548	.	+	0	ID=cds2670;Parent=gene2744;Dbxref=Genbank:YP_857255.1,GeneID:4487877;Name=YP_857255.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857255.1;transl_table=11
NC_008570.1	RefSeq	gene	3085541	3086548	.	+	.	ID=gene2745;Dbxref=GeneID:4487878;Name=AHA_2748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2748
NC_008570.1	RefSeq	CDS	3085541	3086548	.	+	0	ID=cds2671;Parent=gene2745;Dbxref=Genbank:YP_857256.1,GeneID:4487878;Name=YP_857256.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857256.1;transl_table=11
NC_008570.1	RefSeq	gene	3086545	3087042	.	+	.	ID=gene2746;Dbxref=GeneID:4487879;Name=AHA_2749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2749
NC_008570.1	RefSeq	CDS	3086545	3087042	.	+	0	ID=cds2672;Parent=gene2746;Dbxref=Genbank:YP_857257.1,GeneID:4487879;Name=YP_857257.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857257.1;transl_table=11
NC_008570.1	RefSeq	gene	3087116	3087862	.	+	.	ID=gene2747;Dbxref=GeneID:4487949;Name=AHA_2750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2750
NC_008570.1	RefSeq	CDS	3087116	3087862	.	+	0	ID=cds2673;Parent=gene2747;Dbxref=Genbank:YP_857258.1,GeneID:4487949;Name=YP_857258.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857258.1;transl_table=11
NC_008570.1	RefSeq	gene	3087964	3088710	.	+	.	ID=gene2748;Dbxref=GeneID:4487950;Name=AHA_2751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2751
NC_008570.1	RefSeq	CDS	3087964	3088710	.	+	0	ID=cds2674;Parent=gene2748;Dbxref=Genbank:YP_857259.1,GeneID:4487950;Name=YP_857259.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857259.1;transl_table=11
NC_008570.1	RefSeq	gene	3088772	3089785	.	-	.	ID=gene2749;Dbxref=GeneID:4487951;Name=AHA_2752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2752
NC_008570.1	RefSeq	CDS	3088772	3089785	.	-	0	ID=cds2675;Parent=gene2749;Dbxref=Genbank:YP_857260.1,GeneID:4487951;Name=YP_857260.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM PF01590%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857260.1;transl_table=11
NC_008570.1	RefSeq	gene	3090472	3090780	.	-	.	ID=gene2750;Dbxref=GeneID:4487952;Name=AHA_2753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2753
NC_008570.1	RefSeq	CDS	3090472	3090780	.	-	0	ID=cds2676;Parent=gene2750;Dbxref=Genbank:YP_857261.1,GeneID:4487952;Name=YP_857261.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857261.1;transl_table=11
NC_008570.1	RefSeq	gene	3092623	3094152	.	+	.	ID=gene2751;Dbxref=GeneID:4487953;Name=AHA_2754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2754
NC_008570.1	RefSeq	CDS	3092623	3094152	.	+	0	ID=cds2677;Parent=gene2751;Dbxref=Genbank:YP_857262.1,GeneID:4487953;Name=YP_857262.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=YP_857262.1;transl_table=11
NC_008570.1	RefSeq	gene	3094521	3094703	.	-	.	ID=gene2752;Dbxref=GeneID:4487954;Name=AHA_2755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2755
NC_008570.1	RefSeq	CDS	3094521	3094703	.	-	0	ID=cds2678;Parent=gene2752;Dbxref=Genbank:YP_857263.1,GeneID:4487954;Name=YP_857263.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857263.1;transl_table=11
NC_008570.1	RefSeq	gene	3094830	3096206	.	-	.	ID=gene2753;Dbxref=GeneID:4487955;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AHA_2756
NC_008570.1	RefSeq	CDS	3094830	3096206	.	-	0	ID=cds2679;Parent=gene2753;Dbxref=Genbank:YP_857264.1,GeneID:4487955;Name=YP_857264.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=YP_857264.1;transl_table=11
NC_008570.1	RefSeq	gene	3096397	3096894	.	+	.	ID=gene2754;Dbxref=GeneID:4487956;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AHA_2757
NC_008570.1	RefSeq	CDS	3096397	3096894	.	+	0	ID=cds2680;Parent=gene2754;Dbxref=Genbank:YP_857265.1,GeneID:4487956;Name=YP_857265.1;Note=identified by similarity to SP:P23869%3B match to protein family HMM PF00160;gbkey=CDS;gene=ppiB;product=peptidyl-prolyl cis-trans isomerase B;protein_id=YP_857265.1;transl_table=11
NC_008570.1	RefSeq	gene	3096884	3097579	.	+	.	ID=gene2755;Dbxref=GeneID:4487957;Name=AHA_2758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2758
NC_008570.1	RefSeq	CDS	3096884	3097579	.	+	0	ID=cds2681;Parent=gene2755;Dbxref=Genbank:YP_857266.1,GeneID:4487957;Name=YP_857266.1;gbkey=CDS;product=HIT family protein;protein_id=YP_857266.1;transl_table=11
NC_008570.1	RefSeq	gene	3097576	3098301	.	+	.	ID=gene2756;Dbxref=GeneID:4487958;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AHA_2759
NC_008570.1	RefSeq	CDS	3097576	3098301	.	+	0	ID=cds2682;Parent=gene2756;Dbxref=Genbank:YP_857267.1,GeneID:4487958;Name=YP_857267.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR01854;gbkey=CDS;gene=lpxH;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=YP_857267.1;transl_table=11
NC_008570.1	RefSeq	gene	3098388	3099341	.	-	.	ID=gene2757;Dbxref=GeneID:4487959;Name=AHA_2760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2760
NC_008570.1	RefSeq	CDS	3098388	3099341	.	-	0	ID=cds2683;Parent=gene2757;Dbxref=Genbank:YP_857268.1,GeneID:4487959;Name=YP_857268.1;Note=identified by match to protein family HMM PF03916;gbkey=CDS;product=protein NrfD;protein_id=YP_857268.1;transl_table=11
NC_008570.1	RefSeq	gene	3099390	3100058	.	-	.	ID=gene2758;Dbxref=GeneID:4487960;Name=AHA_2761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2761
NC_008570.1	RefSeq	CDS	3099390	3100058	.	-	0	ID=cds2684;Parent=gene2758;Dbxref=Genbank:YP_857269.1,GeneID:4487960;Name=YP_857269.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01409;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=YP_857269.1;transl_table=11
NC_008570.1	RefSeq	gene	3100055	3100684	.	-	.	ID=gene2759;Dbxref=GeneID:4487961;Name=AHA_2762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2762
NC_008570.1	RefSeq	CDS	3100055	3100684	.	-	0	ID=cds2685;Parent=gene2759;Dbxref=Genbank:YP_857270.1,GeneID:4487961;Name=YP_857270.1;gbkey=CDS;product=formate-dependent nitrite reductase;protein_id=YP_857270.1;transl_table=11
NC_008570.1	RefSeq	gene	3100834	3101445	.	-	.	ID=gene2760;Dbxref=GeneID:4487962;Name=AHA_2763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2763
NC_008570.1	RefSeq	CDS	3100834	3101445	.	-	0	ID=cds2686;Parent=gene2760;Dbxref=Genbank:YP_857271.1,GeneID:4487962;Name=YP_857271.1;Note=identified by match to protein family HMM PF00034;gbkey=CDS;product=cytochrome c553;protein_id=YP_857271.1;transl_table=11
NC_008570.1	RefSeq	gene	3101576	3103807	.	+	.	ID=gene2761;Dbxref=GeneID:4487963;Name=AHA_2764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2764
NC_008570.1	RefSeq	CDS	3101576	3103807	.	+	0	ID=cds2687;Parent=gene2761;Dbxref=Genbank:YP_857272.1,GeneID:4487963;Name=YP_857272.1;gbkey=CDS;product=deCa-heme c-type cytochrome;protein_id=YP_857272.1;transl_table=11
NC_008570.1	RefSeq	gene	3103864	3104835	.	+	.	ID=gene2762;Dbxref=GeneID:4487964;Name=AHA_2765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2765
NC_008570.1	RefSeq	CDS	3103864	3104835	.	+	0	ID=cds2688;Parent=gene2762;Dbxref=Genbank:YP_857273.1,GeneID:4487964;Name=YP_857273.1;Note=identified by match to protein family HMM TIGR01905;gbkey=CDS;product=nitrate/TMAO reductase;protein_id=YP_857273.1;transl_table=11
NC_008570.1	RefSeq	gene	3104847	3106838	.	+	.	ID=gene2763;Dbxref=GeneID:4487965;Name=AHA_2766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2766
NC_008570.1	RefSeq	CDS	3104847	3106838	.	+	0	ID=cds2689;Parent=gene2763;Dbxref=Genbank:YP_857274.1,GeneID:4487965;Name=YP_857274.1;gbkey=CDS;product=outer membrane protein;protein_id=YP_857274.1;transl_table=11
NC_008570.1	RefSeq	gene	3106994	3109075	.	-	.	ID=gene2764;Dbxref=GeneID:4487966;Name=AHA_2767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2767
NC_008570.1	RefSeq	CDS	3106994	3109075	.	-	0	ID=cds2690;Parent=gene2764;Dbxref=Genbank:YP_857275.1,GeneID:4487966;Name=YP_857275.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF07238;gbkey=CDS;product=chemotaxis transducer;protein_id=YP_857275.1;transl_table=11
NC_008570.1	RefSeq	gene	3109630	3110919	.	+	.	ID=gene2765;Dbxref=GeneID:4487967;Name=AHA_2768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2768
NC_008570.1	RefSeq	CDS	3109630	3110919	.	+	0	ID=cds2691;Parent=gene2765;Dbxref=Genbank:YP_857276.1,GeneID:4487967;Name=YP_857276.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM TIGR00229;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857276.1;transl_table=11
NC_008570.1	RefSeq	gene	3111150	3111236	.	-	.	ID=gene2766;Dbxref=GeneID:4487968;Name=AHA_2769;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2769
NC_008570.1	RefSeq	tRNA	3111150	3111236	.	-	.	ID=rna71;Parent=gene2766;Dbxref=GeneID:4487968;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	3111150	3111236	.	-	.	ID=id72;Parent=rna71;Dbxref=GeneID:4487968;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	3111278	3111351	.	-	.	ID=gene2767;Dbxref=GeneID:4490088;Name=AHA_2770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2770
NC_008570.1	RefSeq	tRNA	3111278	3111351	.	-	.	ID=rna72;Parent=gene2767;Dbxref=GeneID:4490088;gbkey=tRNA;product=tRNA-Cys
NC_008570.1	RefSeq	exon	3111278	3111351	.	-	.	ID=id73;Parent=rna72;Dbxref=GeneID:4490088;gbkey=tRNA;product=tRNA-Cys
NC_008570.1	RefSeq	gene	3111386	3111461	.	-	.	ID=gene2768;Dbxref=GeneID:4490089;Name=AHA_2771;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2771
NC_008570.1	RefSeq	tRNA	3111386	3111461	.	-	.	ID=rna73;Parent=gene2768;Dbxref=GeneID:4490089;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3111386	3111461	.	-	.	ID=id74;Parent=rna73;Dbxref=GeneID:4490089;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3111643	3112197	.	-	.	ID=gene2769;Dbxref=GeneID:4490090;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AHA_2772
NC_008570.1	RefSeq	CDS	3111643	3112197	.	-	0	ID=cds2692;Parent=gene2769;Dbxref=Genbank:YP_857277.1,GeneID:4490090;Name=YP_857277.1;Note=identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560;gbkey=CDS;gene=pgsA;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=YP_857277.1;transl_table=11
NC_008570.1	RefSeq	gene	3112501	3114351	.	-	.	ID=gene2770;Dbxref=GeneID:4487310;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AHA_2773
NC_008570.1	RefSeq	CDS	3112501	3114351	.	-	0	ID=cds2693;Parent=gene2770;Dbxref=Genbank:YP_857278.1,GeneID:4487310;Name=YP_857278.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=YP_857278.1;transl_table=11
NC_008570.1	RefSeq	gene	3114540	3115184	.	-	.	ID=gene2771;Dbxref=GeneID:4487311;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;gene_synonym=sirA;locus_tag=AHA_2774
NC_008570.1	RefSeq	CDS	3114540	3115184	.	-	0	ID=cds2694;Parent=gene2771;Dbxref=Genbank:YP_857279.1,GeneID:4487311;Name=YP_857279.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=uvrY;product=response regulator;protein_id=YP_857279.1;transl_table=11
NC_008570.1	RefSeq	gene	3115397	3116158	.	-	.	ID=gene2772;Dbxref=GeneID:4487312;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AHA_2775
NC_008570.1	RefSeq	CDS	3115397	3116158	.	-	0	ID=cds2695;Parent=gene2772;Dbxref=Genbank:YP_857280.1,GeneID:4487312;Name=YP_857280.1;Note=identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466;gbkey=CDS;gene=kdsB;product=3-deoxy-D-manno-octulosonate cytidylyltransferase;protein_id=YP_857280.1;transl_table=11
NC_008570.1	RefSeq	gene	3116155	3116343	.	-	.	ID=gene2773;Dbxref=GeneID:4487313;Name=AHA_2776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2776
NC_008570.1	RefSeq	CDS	3116155	3116343	.	-	0	ID=cds2696;Parent=gene2773;Dbxref=Genbank:YP_857281.1,GeneID:4487313;Name=YP_857281.1;Note=identified by match to protein family HMM PF03966;gbkey=CDS;product=hypothetical protein;protein_id=YP_857281.1;transl_table=11
NC_008570.1	RefSeq	gene	3116465	3117466	.	-	.	ID=gene2774;Dbxref=GeneID:4487314;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AHA_2777
NC_008570.1	RefSeq	CDS	3116465	3117466	.	-	0	ID=cds2697;Parent=gene2774;Dbxref=Genbank:YP_857282.1,GeneID:4487314;Name=YP_857282.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=YP_857282.1;transl_table=11
NC_008570.1	RefSeq	gene	3117466	3119235	.	-	.	ID=gene2775;Dbxref=GeneID:4487315;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AHA_2778
NC_008570.1	RefSeq	CDS	3117466	3119235	.	-	0	ID=cds2698;Parent=gene2775;Dbxref=Genbank:YP_857283.1,GeneID:4487315;Name=YP_857283.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR02203;gbkey=CDS;gene=msbA;product=lipid A export permease/ATP-binding protein MsbA;protein_id=YP_857283.1;transl_table=11
NC_008570.1	RefSeq	gene	3119468	3121753	.	-	.	ID=gene2776;Dbxref=GeneID:4487316;Name=AHA_2779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2779
NC_008570.1	RefSeq	CDS	3119468	3121753	.	-	0	ID=cds2699;Parent=gene2776;Dbxref=Genbank:YP_857284.1,GeneID:4487316;Name=YP_857284.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361;gbkey=CDS;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=YP_857284.1;transl_table=11
NC_008570.1	RefSeq	gene	3121697	3122215	.	+	.	ID=gene2777;Dbxref=GeneID:4487317;Name=AHA_2780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2780
NC_008570.1	RefSeq	CDS	3121697	3122215	.	+	0	ID=cds2700;Parent=gene2777;Dbxref=Genbank:YP_857285.1,GeneID:4487317;Name=YP_857285.1;gbkey=CDS;product=flagellar biosynthesis protein FlhF;protein_id=YP_857285.1;transl_table=11
NC_008570.1	RefSeq	gene	3122209	3122703	.	+	.	ID=gene2778;Dbxref=GeneID:4487318;Name=AHA_2781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2781
NC_008570.1	RefSeq	CDS	3122209	3122703	.	+	0	ID=cds2701;Parent=gene2778;Dbxref=Genbank:YP_857286.1,GeneID:4487318;Name=YP_857286.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857286.1;transl_table=11
NC_008570.1	RefSeq	gene	3122826	3124334	.	+	.	ID=gene2779;Dbxref=GeneID:4487319;Name=AHA_2782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2782
NC_008570.1	RefSeq	CDS	3122826	3124334	.	+	0	ID=cds2702;Parent=gene2779;Dbxref=Genbank:YP_857287.1,GeneID:4487319;Name=YP_857287.1;Note=identified by similarity to GB:CAI07148.1%3B match to protein family HMM PF05872;gbkey=CDS;product=hypothetical protein;protein_id=YP_857287.1;transl_table=11
NC_008570.1	RefSeq	gene	3124412	3125602	.	-	.	ID=gene2780;Dbxref=GeneID:4487320;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AHA_2783
NC_008570.1	RefSeq	CDS	3124412	3125602	.	-	0	ID=cds2703;Parent=gene2780;Dbxref=Genbank:YP_857288.1,GeneID:4487320;Name=YP_857288.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;gene=aspC;product=aromatic amino acid aminotransferase;protein_id=YP_857288.1;transl_table=11
NC_008570.1	RefSeq	gene	3125778	3126653	.	-	.	ID=gene2781;Dbxref=GeneID:4487321;Name=AHA_2784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2784
NC_008570.1	RefSeq	CDS	3125778	3126653	.	-	0	ID=cds2704;Parent=gene2781;Dbxref=Genbank:YP_857289.1,GeneID:4487321;Name=YP_857289.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857289.1;transl_table=11
NC_008570.1	RefSeq	gene	3126950	3128017	.	-	.	ID=gene2782;Dbxref=GeneID:4487322;Name=AHA_2785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2785
NC_008570.1	RefSeq	CDS	3126950	3128017	.	-	0	ID=cds2705;Parent=gene2782;Dbxref=Genbank:YP_857290.1,GeneID:4487322;Name=YP_857290.1;Note=identified by match to protein family HMM PF00267;gbkey=CDS;product=outer membrane protein;protein_id=YP_857290.1;transl_table=11
NC_008570.1	RefSeq	gene	3128351	3130471	.	+	.	ID=gene2783;Dbxref=GeneID:4487323;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AHA_2786
NC_008570.1	RefSeq	CDS	3128351	3130471	.	+	0	ID=cds2706;Parent=gene2783;Dbxref=Genbank:YP_857291.1,GeneID:4487323;Name=YP_857291.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=YP_857291.1;transl_table=11
NC_008570.1	RefSeq	gene	3130645	3131304	.	+	.	ID=gene2784;Dbxref=GeneID:4487324;Name=AHA_2787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2787
NC_008570.1	RefSeq	CDS	3130645	3131304	.	+	0	ID=cds2707;Parent=gene2784;Dbxref=Genbank:YP_857292.1,GeneID:4487324;Name=YP_857292.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857292.1;transl_table=11
NC_008570.1	RefSeq	gene	3131326	3132285	.	+	.	ID=gene2785;Dbxref=GeneID:4487325;Name=AHA_2788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2788
NC_008570.1	RefSeq	CDS	3131326	3132285	.	+	0	ID=cds2708;Parent=gene2785;Dbxref=Genbank:YP_857293.1,GeneID:4487325;Name=YP_857293.1;Note=identified by match to protein family HMM PF00850;gbkey=CDS;product=histone deacetylase/AcuC/AphA family protein;protein_id=YP_857293.1;transl_table=11
NC_008570.1	RefSeq	gene	3132464	3133612	.	-	.	ID=gene2786;Dbxref=GeneID:4487326;Name=AHA_2789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2789
NC_008570.1	RefSeq	CDS	3132464	3133612	.	-	0	ID=cds2709;Parent=gene2786;Dbxref=Genbank:YP_857294.1,GeneID:4487326;Name=YP_857294.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=MFS family transporter protein;protein_id=YP_857294.1;transl_table=11
NC_008570.1	RefSeq	gene	3133985	3134935	.	-	.	ID=gene2787;Dbxref=GeneID:4487327;Name=rbgA;gbkey=Gene;gene=rbgA;gene_biotype=protein_coding;gene_synonym=ylqF;locus_tag=AHA_2790
NC_008570.1	RefSeq	CDS	3133985	3134935	.	-	0	ID=cds2710;Parent=gene2787;Dbxref=Genbank:YP_857295.1,GeneID:4487327;Name=YP_857295.1;Note=essential GTPase%3B functions in ribosome assembly%3B binds a unique part of the 23S rRNA%3B interacts with ribosomal protein L25(Ctc);gbkey=CDS;gene=rbgA;product=ribosomal biogenesis GTPase;protein_id=YP_857295.1;transl_table=11
NC_008570.1	RefSeq	gene	3135268	3136659	.	+	.	ID=gene2788;Dbxref=GeneID:4487328;Name=AHA_2791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2791
NC_008570.1	RefSeq	CDS	3135268	3136659	.	+	0	ID=cds2711;Parent=gene2788;Dbxref=Genbank:YP_857296.1,GeneID:4487328;Name=YP_857296.1;Note=identified by match to protein family HMM PF00245;gbkey=CDS;product=alkaline phosphatase%2C placental type;protein_id=YP_857296.1;transl_table=11
NC_008570.1	RefSeq	gene	3136671	3138077	.	+	.	ID=gene2789;Dbxref=GeneID:4488142;Name=AHA_2792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2792
NC_008570.1	RefSeq	CDS	3136671	3138077	.	+	0	ID=cds2712;Parent=gene2789;Dbxref=Genbank:YP_857297.1,GeneID:4488142;Name=YP_857297.1;Note=identified by match to protein family HMM PF00245;gbkey=CDS;product=alkaline phosphatase%2C tissue-nonspecific isozyme;protein_id=YP_857297.1;transl_table=11
NC_008570.1	RefSeq	gene	3138128	3138811	.	+	.	ID=gene2790;Dbxref=GeneID:4488143;Name=AHA_2793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2793
NC_008570.1	RefSeq	CDS	3138128	3138811	.	+	0	ID=cds2713;Parent=gene2790;Dbxref=Genbank:YP_857298.1,GeneID:4488143;Name=YP_857298.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857298.1;transl_table=11
NC_008570.1	RefSeq	gene	3138865	3139623	.	+	.	ID=gene2791;Dbxref=GeneID:4488144;Name=AHA_2794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2794
NC_008570.1	RefSeq	CDS	3138865	3139623	.	+	0	ID=cds2714;Parent=gene2791;Dbxref=Genbank:YP_857299.1,GeneID:4488144;Name=YP_857299.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857299.1;transl_table=11
NC_008570.1	RefSeq	gene	3139856	3140251	.	+	.	ID=gene2792;Dbxref=GeneID:4488145;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AHA_2795
NC_008570.1	RefSeq	CDS	3139856	3140251	.	+	0	ID=cds2715;Parent=gene2792;Dbxref=Genbank:YP_857300.1,GeneID:4488145;Name=YP_857300.1;Note=identified by match to protein family HMM PF01272;gbkey=CDS;gene=rnk;product=regulator of nucleoside diphosphate kinase;protein_id=YP_857300.1;transl_table=11
NC_008570.1	RefSeq	gene	3140441	3141031	.	+	.	ID=gene2793;Dbxref=GeneID:4488146;Name=AHA_2796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2796
NC_008570.1	RefSeq	CDS	3140441	3141031	.	+	0	ID=cds2716;Parent=gene2793;Dbxref=Genbank:YP_857301.1,GeneID:4488146;Name=YP_857301.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=DNA-binding transcriptional activator UhpA;protein_id=YP_857301.1;transl_table=11
NC_008570.1	RefSeq	gene	3141028	3142548	.	+	.	ID=gene2794;Dbxref=GeneID:4488147;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AHA_2797
NC_008570.1	RefSeq	CDS	3141028	3142548	.	+	0	ID=cds2717;Parent=gene2794;Dbxref=Genbank:YP_857302.1,GeneID:4488147;Name=YP_857302.1;Note=Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph;gbkey=CDS;gene=uhpB;product=sensory histidine kinase UhpB;protein_id=YP_857302.1;transl_table=11
NC_008570.1	RefSeq	gene	3142576	3143904	.	+	.	ID=gene2795;Dbxref=GeneID:4488148;Name=AHA_2798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2798
NC_008570.1	RefSeq	CDS	3142576	3143904	.	+	0	ID=cds2718;Parent=gene2795;Dbxref=Genbank:YP_857303.1,GeneID:4488148;Name=YP_857303.1;Note=membrane protein regulates uhpT expression;gbkey=CDS;product=regulatory protein UhpC;protein_id=YP_857303.1;transl_table=11
NC_008570.1	RefSeq	gene	3143909	3145048	.	-	.	ID=gene2796;Dbxref=GeneID:4488149;Name=AHA_2799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2799
NC_008570.1	RefSeq	CDS	3143909	3145048	.	-	0	ID=cds2719;Parent=gene2796;Dbxref=Genbank:YP_857304.1,GeneID:4488149;Name=YP_857304.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase/phosphodiesterase;protein_id=YP_857304.1;transl_table=11
NC_008570.1	RefSeq	gene	3145487	3146338	.	+	.	ID=gene2797;Dbxref=GeneID:4488150;Name=AHA_2800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2800
NC_008570.1	RefSeq	CDS	3145487	3146338	.	+	0	ID=cds2720;Parent=gene2797;Dbxref=Genbank:YP_857305.1,GeneID:4488150;Name=YP_857305.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_857305.1;transl_table=11
NC_008570.1	RefSeq	gene	3146408	3147388	.	+	.	ID=gene2798;Dbxref=GeneID:4488151;Name=AHA_2801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2801
NC_008570.1	RefSeq	CDS	3146408	3147388	.	+	0	ID=cds2721;Parent=gene2798;Dbxref=Genbank:YP_857306.1,GeneID:4488151;Name=YP_857306.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=YP_857306.1;transl_table=11
NC_008570.1	RefSeq	gene	3147372	3148115	.	+	.	ID=gene2799;Dbxref=GeneID:4488152;Name=AHA_2802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2802
NC_008570.1	RefSeq	CDS	3147372	3148115	.	+	0	ID=cds2722;Parent=gene2799;Dbxref=Genbank:YP_857307.1,GeneID:4488152;Name=YP_857307.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=glutamate transport ATP-binding protein GluA;protein_id=YP_857307.1;transl_table=11
NC_008570.1	RefSeq	gene	3148187	3148636	.	-	.	ID=gene2800;Dbxref=GeneID:4488153;Name=AHA_2803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2803
NC_008570.1	RefSeq	CDS	3148187	3148636	.	-	0	ID=cds2723;Parent=gene2800;Dbxref=Genbank:YP_857308.1,GeneID:4488153;Name=YP_857308.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857308.1;transl_table=11
NC_008570.1	RefSeq	gene	3148887	3149654	.	-	.	ID=gene2801;Dbxref=GeneID:4488154;Name=AHA_2804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2804
NC_008570.1	RefSeq	CDS	3148887	3149654	.	-	0	ID=cds2724;Parent=gene2801;Dbxref=Genbank:YP_857309.1,GeneID:4488154;Name=YP_857309.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_857309.1;transl_table=11
NC_008570.1	RefSeq	gene	3149812	3150723	.	+	.	ID=gene2802;Dbxref=GeneID:4488155;Name=AHA_2805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2805
NC_008570.1	RefSeq	CDS	3149812	3150723	.	+	0	ID=cds2725;Parent=gene2802;Dbxref=Genbank:YP_857310.1,GeneID:4488155;Name=YP_857310.1;gbkey=CDS;product=C-5 sterol desaturase;protein_id=YP_857310.1;transl_table=11
NC_008570.1	RefSeq	gene	3150810	3152210	.	-	.	ID=gene2803;Dbxref=GeneID:4488156;Name=AHA_2806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2806
NC_008570.1	RefSeq	CDS	3150810	3152210	.	-	0	ID=cds2726;Parent=gene2803;Dbxref=Genbank:YP_857311.1,GeneID:4488156;Name=YP_857311.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=arginine/ornithine antiporter;protein_id=YP_857311.1;transl_table=11
NC_008570.1	RefSeq	gene	3152220	3153122	.	-	.	ID=gene2804;Dbxref=GeneID:4488157;Name=AHA_2807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2807
NC_008570.1	RefSeq	CDS	3152220	3153122	.	-	0	ID=cds2727;Parent=gene2804;Dbxref=Genbank:YP_857312.1,GeneID:4488157;Name=YP_857312.1;Note=identified by match to protein family HMM PF02574;gbkey=CDS;product=homocysteine S-methyltransferase;protein_id=YP_857312.1;transl_table=11
NC_008570.1	RefSeq	gene	3153392	3153928	.	-	.	ID=gene2805;Dbxref=GeneID:4488158;Name=AHA_2808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2808
NC_008570.1	RefSeq	CDS	3153392	3153928	.	-	0	ID=cds2728;Parent=gene2805;Dbxref=Genbank:YP_857313.1,GeneID:4488158;Name=YP_857313.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857313.1;transl_table=11
NC_008570.1	RefSeq	gene	3153954	3155273	.	-	.	ID=gene2806;Dbxref=GeneID:4488159;Name=AHA_2809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2809
NC_008570.1	RefSeq	CDS	3153954	3155273	.	-	0	ID=cds2729;Parent=gene2806;Dbxref=Genbank:YP_857314.1,GeneID:4488159;Name=YP_857314.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;product=transporter;protein_id=YP_857314.1;transl_table=11
NC_008570.1	RefSeq	gene	3155466	3156176	.	-	.	ID=gene2807;Dbxref=GeneID:4488160;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AHA_2810
NC_008570.1	RefSeq	CDS	3155466	3156176	.	-	0	ID=cds2730;Parent=gene2807;Dbxref=Genbank:YP_857315.1,GeneID:4488160;Name=YP_857315.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;gene=phoU;product=transcriptional regulator PhoU;protein_id=YP_857315.1;transl_table=11
NC_008570.1	RefSeq	gene	3156287	3157105	.	-	.	ID=gene2808;Dbxref=GeneID:4488161;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AHA_2811
NC_008570.1	RefSeq	CDS	3156287	3157105	.	-	0	ID=cds2731;Parent=gene2808;Dbxref=Genbank:YP_857316.1,GeneID:4488161;Name=YP_857316.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;gene=pstB;product=phosphate ABC transporter ATP-binding protein;protein_id=YP_857316.1;transl_table=11
NC_008570.1	RefSeq	gene	3157215	3158864	.	-	.	ID=gene2809;Dbxref=GeneID:4488737;Name=AHA_2812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2812
NC_008570.1	RefSeq	CDS	3157215	3158864	.	-	0	ID=cds2732;Parent=gene2809;Dbxref=Genbank:YP_857317.1,GeneID:4488737;Name=YP_857317.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974;gbkey=CDS;product=transmembrane component of the phosphate specific transport complex;protein_id=YP_857317.1;transl_table=11
NC_008570.1	RefSeq	gene	3158897	3161134	.	-	.	ID=gene2810;Dbxref=GeneID:4488738;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AHA_2813
NC_008570.1	RefSeq	CDS	3158897	3161134	.	-	0	ID=cds2733;Parent=gene2810;Dbxref=Genbank:YP_857318.1,GeneID:4488738;Name=YP_857318.1;Note=part of the evidence for the annotation of this gene is based on the presence of the gene in a cluster with related functions%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=pstC;product=phosphate ABC transporter permease;protein_id=YP_857318.1;transl_table=11
NC_008570.1	RefSeq	gene	3161341	3161880	.	-	.	ID=gene2811;Dbxref=GeneID:4488739;Name=AHA_2814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2814
NC_008570.1	RefSeq	CDS	3161341	3161880	.	-	0	ID=cds2734;Parent=gene2811;Dbxref=Genbank:YP_857319.1,GeneID:4488739;Name=YP_857319.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;product=tRNA-specific adenosine deaminase;protein_id=YP_857319.1;transl_table=11
NC_008570.1	RefSeq	gene	3162154	3162230	.	+	.	ID=gene2812;Dbxref=GeneID:4488740;Name=AHA_2815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_2815
NC_008570.1	RefSeq	tRNA	3162154	3162230	.	+	.	ID=rna74;Parent=gene2812;Dbxref=GeneID:4488740;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	exon	3162154	3162230	.	+	.	ID=id75;Parent=rna74;Dbxref=GeneID:4488740;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	gene	3163381	3164988	.	+	.	ID=gene2813;Dbxref=GeneID:4488741;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AHA_2816
NC_008570.1	RefSeq	CDS	3163381	3164988	.	+	0	ID=cds2735;Parent=gene2813;Dbxref=Genbank:YP_857320.1,GeneID:4488741;Name=YP_857320.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;gene=aceB;product=malate synthase;protein_id=YP_857320.1;transl_table=11
NC_008570.1	RefSeq	gene	3165064	3166377	.	+	.	ID=gene2814;Dbxref=GeneID:4488742;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AHA_2817
NC_008570.1	RefSeq	CDS	3165064	3166377	.	+	0	ID=cds2736;Parent=gene2814;Dbxref=Genbank:YP_857321.1,GeneID:4488742;Name=YP_857321.1;Note=identified by match to protein family HMM PF00463%3B match to protein family HMM TIGR01346;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=YP_857321.1;transl_table=11
NC_008570.1	RefSeq	gene	3166627	3167424	.	-	.	ID=gene2815;Dbxref=GeneID:4488743;Name=dnaA-2;gbkey=Gene;gene=dnaA-2;gene_biotype=protein_coding;locus_tag=AHA_2818
NC_008570.1	RefSeq	CDS	3166627	3167424	.	-	0	ID=cds2737;Parent=gene2815;Dbxref=Genbank:YP_857322.1,GeneID:4488743;Name=YP_857322.1;Note=identified by match to protein family HMM PF00308;gbkey=CDS;gene=dnaA-2;product=chromosomal replication initiator protein DnaA;protein_id=YP_857322.1;transl_table=11
NC_008570.1	RefSeq	gene	3167544	3168572	.	-	.	ID=gene2816;Dbxref=GeneID:4488744;Name=AHA_2819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2819
NC_008570.1	RefSeq	CDS	3167544	3168572	.	-	0	ID=cds2738;Parent=gene2816;Dbxref=Genbank:YP_857323.1,GeneID:4488744;Name=YP_857323.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857323.1;transl_table=11
NC_008570.1	RefSeq	gene	3168716	3169342	.	-	.	ID=gene2817;Dbxref=GeneID:4488745;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AHA_2820
NC_008570.1	RefSeq	CDS	3168716	3169342	.	-	0	ID=cds2739;Parent=gene2817;Dbxref=Genbank:YP_857324.1,GeneID:4488745;Name=YP_857324.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=YP_857324.1;transl_table=11
NC_008570.1	RefSeq	gene	3169518	3170555	.	+	.	ID=gene2818;Dbxref=GeneID:4488746;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AHA_2821
NC_008570.1	RefSeq	CDS	3169518	3170555	.	+	0	ID=cds2740;Parent=gene2818;Dbxref=Genbank:YP_857325.1,GeneID:4488746;Name=YP_857325.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_857325.1;transl_table=11
NC_008570.1	RefSeq	gene	3170576	3171226	.	+	.	ID=gene2819;Dbxref=GeneID:4488747;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AHA_2822
NC_008570.1	RefSeq	CDS	3170576	3171226	.	+	0	ID=cds2741;Parent=gene2819;Dbxref=Genbank:YP_857326.1,GeneID:4488747;Name=YP_857326.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_857326.1;transl_table=11
NC_008570.1	RefSeq	gene	3171345	3172106	.	-	.	ID=gene2820;Dbxref=GeneID:4488748;Name=AHA_2823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2823
NC_008570.1	RefSeq	CDS	3171345	3172106	.	-	0	ID=cds2742;Parent=gene2820;Dbxref=Genbank:YP_857327.1,GeneID:4488748;Name=YP_857327.1;Note=identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;product=hypothetical protein;protein_id=YP_857327.1;transl_table=11
NC_008570.1	RefSeq	gene	3172254	3173597	.	-	.	ID=gene2821;Dbxref=GeneID:4488749;Name=AHA_2824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2824
NC_008570.1	RefSeq	CDS	3172254	3173597	.	-	0	ID=cds2743;Parent=gene2821;Dbxref=Genbank:YP_857328.1,GeneID:4488749;Name=YP_857328.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=transcriptional activator;protein_id=YP_857328.1;transl_table=11
NC_008570.1	RefSeq	gene	3173659	3174693	.	-	.	ID=gene2822;Dbxref=GeneID:4488750;Name=AHA_2825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2825
NC_008570.1	RefSeq	CDS	3173659	3174693	.	-	0	ID=cds2744;Parent=gene2822;Dbxref=Genbank:YP_857329.1,GeneID:4488750;Name=YP_857329.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=two-component sensor kinase;protein_id=YP_857329.1;transl_table=11
NC_008570.1	RefSeq	gene	3174800	3176218	.	-	.	ID=gene2823;Dbxref=GeneID:4488751;Name=AHA_2826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2826
NC_008570.1	RefSeq	CDS	3174800	3176218	.	-	0	ID=cds2745;Parent=gene2823;Dbxref=Genbank:YP_857330.1,GeneID:4488751;Name=YP_857330.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;product=FleQ protein;protein_id=YP_857330.1;transl_table=11
NC_008570.1	RefSeq	gene	3176500	3177336	.	-	.	ID=gene2824;Dbxref=GeneID:4488752;Name=AHA_2827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2827
NC_008570.1	RefSeq	CDS	3176500	3177336	.	-	0	ID=cds2746;Parent=gene2824;Dbxref=Genbank:YP_857331.1,GeneID:4488752;Name=YP_857331.1;Note=identified by match to protein family HMM PF01396;gbkey=CDS;product=topoisomerase DNA binding C4 zinc finger domain-containing protein;protein_id=YP_857331.1;transl_table=11
NC_008570.1	RefSeq	gene	3177296	3178093	.	+	.	ID=gene2825;Dbxref=GeneID:4488753;Name=AHA_2828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2828
NC_008570.1	RefSeq	CDS	3177296	3178093	.	+	0	ID=cds2747;Parent=gene2825;Dbxref=Genbank:YP_857332.1,GeneID:4488753;Name=YP_857332.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;product=ACT domain-containing protein;protein_id=YP_857332.1;transl_table=11
NC_008570.1	RefSeq	gene	3178169	3180238	.	+	.	ID=gene2826;Dbxref=GeneID:4488754;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=AHA_2829
NC_008570.1	RefSeq	CDS	3178169	3180238	.	+	0	ID=cds2748;Parent=gene2826;Dbxref=Genbank:YP_857333.1,GeneID:4488754;Name=YP_857333.1;Note=identified by match to protein family HMM PF02503;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=YP_857333.1;transl_table=11
NC_008570.1	RefSeq	gene	3180228	3181718	.	+	.	ID=gene2827;Dbxref=GeneID:4488755;Name=AHA_2830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2830
NC_008570.1	RefSeq	CDS	3180228	3181718	.	+	0	ID=cds2749;Parent=gene2827;Dbxref=Genbank:YP_857334.1,GeneID:4488755;Name=YP_857334.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;product=exopolyphosphatase;protein_id=YP_857334.1;transl_table=11
NC_008570.1	RefSeq	gene	3181783	3183126	.	-	.	ID=gene2828;Dbxref=GeneID:4489814;Name=mgtE-1;gbkey=Gene;gene=mgtE-1;gene_biotype=protein_coding;locus_tag=AHA_2831
NC_008570.1	RefSeq	CDS	3181783	3183126	.	-	0	ID=cds2750;Parent=gene2828;Dbxref=Genbank:YP_857335.1,GeneID:4489814;Name=YP_857335.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM TIGR00400;gbkey=CDS;gene=mgtE-1;product=magnesium transporter;protein_id=YP_857335.1;transl_table=11
NC_008570.1	RefSeq	gene	3183631	3184839	.	-	.	ID=gene2829;Dbxref=GeneID:4489815;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AHA_2832
NC_008570.1	RefSeq	CDS	3183631	3184839	.	-	0	ID=cds2751;Parent=gene2829;Dbxref=Genbank:YP_857336.1,GeneID:4489815;Name=YP_857336.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=YP_857336.1;transl_table=11
NC_008570.1	RefSeq	gene	3184844	3186844	.	-	.	ID=gene2830;Dbxref=GeneID:4489816;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AHA_2833
NC_008570.1	RefSeq	CDS	3184844	3186844	.	-	0	ID=cds2752;Parent=gene2830;Dbxref=Genbank:YP_857337.1,GeneID:4489816;Name=YP_857337.1;Note=identified by similarity to GB:AAN08646.1%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02492;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein FlgK;protein_id=YP_857337.1;transl_table=11
NC_008570.1	RefSeq	gene	3186848	3187897	.	-	.	ID=gene2831;Dbxref=GeneID:4489817;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AHA_2834
NC_008570.1	RefSeq	CDS	3186848	3187897	.	-	0	ID=cds2753;Parent=gene2831;Dbxref=Genbank:YP_857338.1,GeneID:4489817;Name=YP_857338.1;Note=identified by similarity to GB:AAN08645.1%3B match to protein family HMM PF01832%3B match to protein family HMM TIGR02541;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein/muramidase FlgJ;protein_id=YP_857338.1;transl_table=11
NC_008570.1	RefSeq	gene	3187984	3189081	.	-	.	ID=gene2832;Dbxref=GeneID:4489818;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AHA_2835
NC_008570.1	RefSeq	CDS	3187984	3189081	.	-	0	ID=cds2754;Parent=gene2832;Dbxref=Genbank:YP_857339.1,GeneID:4489818;Name=YP_857339.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=YP_857339.1;transl_table=11
NC_008570.1	RefSeq	gene	3189090	3189761	.	-	.	ID=gene2833;Dbxref=GeneID:4489819;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AHA_2836
NC_008570.1	RefSeq	CDS	3189090	3189761	.	-	0	ID=cds2755;Parent=gene2833;Dbxref=Genbank:YP_857340.1,GeneID:4489819;Name=YP_857340.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;gbkey=CDS;gene=flgH;product=flagellar basal body L-ring protein;protein_id=YP_857340.1;transl_table=11
NC_008570.1	RefSeq	gene	3189776	3190564	.	-	.	ID=gene2834;Dbxref=GeneID:4489820;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AHA_2837
NC_008570.1	RefSeq	CDS	3189776	3190564	.	-	0	ID=cds2756;Parent=gene2834;Dbxref=Genbank:YP_857341.1,GeneID:4489820;Name=YP_857341.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=YP_857341.1;transl_table=11
NC_008570.1	RefSeq	gene	3190579	3191325	.	-	.	ID=gene2835;Dbxref=GeneID:4489821;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AHA_2838
NC_008570.1	RefSeq	CDS	3190579	3191325	.	-	0	ID=cds2757;Parent=gene2835;Dbxref=Genbank:YP_857342.1,GeneID:4489821;Name=YP_857342.1;Note=identified by similarity to GB:AAN08641.1%3B match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02490;gbkey=CDS;gene=flgF;product=flagellar basal-body rod protein FlgF;protein_id=YP_857342.1;transl_table=11
NC_008570.1	RefSeq	gene	3191461	3192795	.	-	.	ID=gene2836;Dbxref=GeneID:4489822;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AHA_2839
NC_008570.1	RefSeq	CDS	3191461	3192795	.	-	0	ID=cds2758;Parent=gene2836;Dbxref=Genbank:YP_857343.1,GeneID:4489822;Name=YP_857343.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=YP_857343.1;transl_table=11
NC_008570.1	RefSeq	gene	3192806	3193534	.	-	.	ID=gene2837;Dbxref=GeneID:4489823;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AHA_2840
NC_008570.1	RefSeq	CDS	3192806	3193534	.	-	0	ID=cds2759;Parent=gene2837;Dbxref=Genbank:YP_857344.1,GeneID:4489823;Name=YP_857344.1;Note=identified by similarity to GB:AAN08639.1%3B match to protein family HMM PF03963;gbkey=CDS;gene=flgD;product=flagellar hook capping protein;protein_id=YP_857344.1;transl_table=11
NC_008570.1	RefSeq	gene	3193550	3193969	.	-	.	ID=gene2838;Dbxref=GeneID:4489824;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AHA_2841
NC_008570.1	RefSeq	CDS	3193550	3193969	.	-	0	ID=cds2760;Parent=gene2838;Dbxref=Genbank:YP_857345.1,GeneID:4489824;Name=YP_857345.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=YP_857345.1;transl_table=11
NC_008570.1	RefSeq	gene	3193969	3194367	.	-	.	ID=gene2839;Dbxref=GeneID:4489825;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AHA_2842
NC_008570.1	RefSeq	CDS	3193969	3194367	.	-	0	ID=cds2761;Parent=gene2839;Dbxref=Genbank:YP_857346.1,GeneID:4489825;Name=YP_857346.1;Note=identified by similarity to GB:AAN08637.1%3B match to protein family HMM PF00460%3B match to protein family HMM TIGR01396;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=YP_857346.1;transl_table=11
NC_008570.1	RefSeq	gene	3194431	3195255	.	-	.	ID=gene2840;Dbxref=GeneID:4489826;Name=cheR-3;gbkey=Gene;gene=cheR-3;gene_biotype=protein_coding;locus_tag=AHA_2843
NC_008570.1	RefSeq	CDS	3194431	3195255	.	-	0	ID=cds2762;Parent=gene2840;Dbxref=Genbank:YP_857347.1,GeneID:4489826;Name=YP_857347.1;Note=identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705;gbkey=CDS;gene=cheR-3;product=chemotaxis protein CheR;protein_id=YP_857347.1;transl_table=11
NC_008570.1	RefSeq	gene	3195274	3196185	.	-	.	ID=gene2841;Dbxref=GeneID:4489827;Name=AHA_2844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2844
NC_008570.1	RefSeq	CDS	3195274	3196185	.	-	0	ID=cds2763;Parent=gene2841;Dbxref=Genbank:YP_857348.1,GeneID:4489827;Name=YP_857348.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01584;gbkey=CDS;product=CheV;protein_id=YP_857348.1;transl_table=11
NC_008570.1	RefSeq	gene	3196156	3197013	.	+	.	ID=gene2842;Dbxref=GeneID:4489828;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AHA_2845
NC_008570.1	RefSeq	CDS	3196156	3197013	.	+	0	ID=cds2764;Parent=gene2842;Dbxref=Genbank:YP_857349.1,GeneID:4489828;Name=YP_857349.1;Note=identified by similarity to GB:AAN08634.1%3B match to protein family HMM PF03240;gbkey=CDS;gene=flgA;product=flagella basal body P-ring formation protein FlgA;protein_id=YP_857349.1;transl_table=11
NC_008570.1	RefSeq	gene	3197104	3197424	.	+	.	ID=gene2843;Dbxref=GeneID:4489829;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AHA_2846
NC_008570.1	RefSeq	CDS	3197104	3197424	.	+	0	ID=cds2765;Parent=gene2843;Dbxref=Genbank:YP_857350.1,GeneID:4489829;Name=YP_857350.1;Note=identified by similarity to GB:AAN08633.1%3B match to protein family HMM PF04316;gbkey=CDS;gene=flgM;product=anti-sigma-D factor;protein_id=YP_857350.1;transl_table=11
NC_008570.1	RefSeq	gene	3197424	3197837	.	+	.	ID=gene2844;Dbxref=GeneID:4489830;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AHA_2847
NC_008570.1	RefSeq	CDS	3197424	3197837	.	+	0	ID=cds2766;Parent=gene2844;Dbxref=Genbank:YP_857351.1,GeneID:4489830;Name=YP_857351.1;Note=identified by match to protein family HMM PF05130;gbkey=CDS;gene=flgN;product=flagellar protein FlgN;protein_id=YP_857351.1;transl_table=11
NC_008570.1	RefSeq	gene	3197895	3198437	.	-	.	ID=gene2845;Dbxref=GeneID:4489831;Name=AHA_2848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2848
NC_008570.1	RefSeq	CDS	3197895	3198437	.	-	0	ID=cds2767;Parent=gene2845;Dbxref=Genbank:YP_857352.1,GeneID:4489831;Name=YP_857352.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040;gbkey=CDS;product=phosphodiesterase;protein_id=YP_857352.1;transl_table=11
NC_008570.1	RefSeq	gene	3198448	3200211	.	-	.	ID=gene2846;Dbxref=GeneID:4489832;Name=AHA_2849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2849
NC_008570.1	RefSeq	CDS	3198448	3200211	.	-	0	ID=cds2768;Parent=gene2846;Dbxref=Genbank:YP_857353.1,GeneID:4489832;Name=YP_857353.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=periplasmic murein peptide-binding protein;protein_id=YP_857353.1;transl_table=11
NC_008570.1	RefSeq	gene	3200311	3201216	.	+	.	ID=gene2847;Dbxref=GeneID:4489833;Name=AHA_2850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2850
NC_008570.1	RefSeq	CDS	3200311	3201216	.	+	0	ID=cds2769;Parent=gene2847;Dbxref=Genbank:YP_857354.1,GeneID:4489833;Name=YP_857354.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_857354.1;transl_table=11
NC_008570.1	RefSeq	gene	3201228	3201920	.	-	.	ID=gene2848;Dbxref=GeneID:4487537;Name=AHA_2851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2851
NC_008570.1	RefSeq	CDS	3201228	3201920	.	-	0	ID=cds2770;Parent=gene2848;Dbxref=Genbank:YP_857355.1,GeneID:4487537;Name=YP_857355.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=YP_857355.1;transl_table=11
NC_008570.1	RefSeq	gene	3202095	3203291	.	+	.	ID=gene2849;Dbxref=GeneID:4487538;Name=AHA_2853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2853
NC_008570.1	RefSeq	CDS	3202095	3203291	.	+	0	ID=cds2771;Parent=gene2849;Dbxref=Genbank:YP_857356.1,GeneID:4487538;Name=YP_857356.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=YP_857356.1;transl_table=11
NC_008570.1	RefSeq	gene	3203288	3203476	.	-	.	ID=gene2850;Dbxref=GeneID:4487539;Name=AHA_2852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2852
NC_008570.1	RefSeq	CDS	3203288	3203476	.	-	0	ID=cds2772;Parent=gene2850;Dbxref=Genbank:YP_857357.1,GeneID:4487539;Name=YP_857357.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857357.1;transl_table=11
NC_008570.1	RefSeq	gene	3203576	3204226	.	-	.	ID=gene2851;Dbxref=GeneID:4487540;Name=AHA_2854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2854
NC_008570.1	RefSeq	CDS	3203576	3204226	.	-	0	ID=cds2773;Parent=gene2851;Dbxref=Genbank:YP_857358.1,GeneID:4487540;Name=YP_857358.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=YP_857358.1;transl_table=11
NC_008570.1	RefSeq	gene	3204355	3205251	.	+	.	ID=gene2852;Dbxref=GeneID:4487541;Name=AHA_2855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2855
NC_008570.1	RefSeq	CDS	3204355	3205251	.	+	0	ID=cds2774;Parent=gene2852;Dbxref=Genbank:YP_857359.1,GeneID:4487541;Name=YP_857359.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;product=pyruvate formate-lyase 2-activating enzyme;protein_id=YP_857359.1;transl_table=11
NC_008570.1	RefSeq	gene	3205304	3207736	.	+	.	ID=gene2853;Dbxref=GeneID:4487542;Name=AHA_2856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2856
NC_008570.1	RefSeq	CDS	3205304	3207736	.	+	0	ID=cds2775;Parent=gene2853;Dbxref=Genbank:YP_857360.1,GeneID:4487542;Name=YP_857360.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01774;gbkey=CDS;product=pyruvate formate-lyase;protein_id=YP_857360.1;transl_table=11
NC_008570.1	RefSeq	gene	3207829	3208575	.	+	.	ID=gene2854;Dbxref=GeneID:4487543;Name=AHA_2857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2857
NC_008570.1	RefSeq	CDS	3207829	3208575	.	+	0	ID=cds2776;Parent=gene2854;Dbxref=Genbank:YP_857361.1,GeneID:4487543;Name=YP_857361.1;Note=identified by match to protein family HMM PF00455%3B match to protein family HMM PF01022%3B match to protein family HMM PF08220;gbkey=CDS;product=HTH-type transcriptional regulator YciT;protein_id=YP_857361.1;transl_table=11
NC_008570.1	RefSeq	gene	3208505	3209596	.	+	.	ID=gene2855;Dbxref=GeneID:4487544;Name=AHA_2858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2858
NC_008570.1	RefSeq	CDS	3208505	3209596	.	+	0	ID=cds2777;Parent=gene2855;Dbxref=Genbank:YP_857362.1,GeneID:4487544;Name=YP_857362.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family transporter;protein_id=YP_857362.1;transl_table=11
NC_008570.1	RefSeq	gene	3209718	3211568	.	+	.	ID=gene2856;Dbxref=GeneID:4487545;Name=AHA_2859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2859
NC_008570.1	RefSeq	CDS	3209718	3211568	.	+	0	ID=cds2778;Parent=gene2856;Dbxref=Genbank:YP_857363.1,GeneID:4487545;Name=YP_857363.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter periplasmic protein;protein_id=YP_857363.1;transl_table=11
NC_008570.1	RefSeq	gene	3211665	3212057	.	-	.	ID=gene2857;Dbxref=GeneID:4487546;Name=AHA_2860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2860
NC_008570.1	RefSeq	CDS	3211665	3212057	.	-	0	ID=cds2779;Parent=gene2857;Dbxref=Genbank:YP_857364.1,GeneID:4487546;Name=YP_857364.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857364.1;transl_table=11
NC_008570.1	RefSeq	gene	3212151	3212708	.	-	.	ID=gene2858;Dbxref=GeneID:4487547;Name=AHA_2861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2861
NC_008570.1	RefSeq	CDS	3212151	3212708	.	-	0	ID=cds2780;Parent=gene2858;Dbxref=Genbank:YP_857365.1,GeneID:4487547;Name=YP_857365.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857365.1;transl_table=11
NC_008570.1	RefSeq	gene	3212959	3213207	.	+	.	ID=gene2859;Dbxref=GeneID:4487548;Name=AHA_2863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2863
NC_008570.1	RefSeq	CDS	3212959	3213207	.	+	0	ID=cds2781;Parent=gene2859;Dbxref=Genbank:YP_857366.1,GeneID:4487548;Name=YP_857366.1;Note=identified by match to protein family HMM TIGR02647;gbkey=CDS;product=hypothetical protein;protein_id=YP_857366.1;transl_table=11
NC_008570.1	RefSeq	gene	3213194	3213574	.	-	.	ID=gene2860;Dbxref=GeneID:4487549;Name=AHA_2862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2862
NC_008570.1	RefSeq	CDS	3213194	3213574	.	-	0	ID=cds2782;Parent=gene2860;Dbxref=Genbank:YP_857367.1,GeneID:4487549;Name=YP_857367.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857367.1;transl_table=11
NC_008570.1	RefSeq	gene	3213623	3213832	.	-	.	ID=gene2861;Dbxref=GeneID:4487550;Name=AHA_2864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2864
NC_008570.1	RefSeq	CDS	3213623	3213832	.	-	0	ID=cds2783;Parent=gene2861;Dbxref=Genbank:YP_857368.1,GeneID:4487550;Name=YP_857368.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;product=hypothetical protein;protein_id=YP_857368.1;transl_table=11
NC_008570.1	RefSeq	gene	3214037	3215137	.	-	.	ID=gene2862;Dbxref=GeneID:4487551;Name=AHA_2865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2865
NC_008570.1	RefSeq	CDS	3214037	3215137	.	-	0	ID=cds2784;Parent=gene2862;Dbxref=Genbank:YP_857369.1,GeneID:4487551;Name=YP_857369.1;Note=identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817;gbkey=CDS;product=pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase component;protein_id=YP_857369.1;transl_table=11
NC_008570.1	RefSeq	gene	3215134	3216120	.	-	.	ID=gene2863;Dbxref=GeneID:4487552;Name=AHA_2866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2866
NC_008570.1	RefSeq	CDS	3215134	3216120	.	-	0	ID=cds2785;Parent=gene2863;Dbxref=Genbank:YP_857370.1,GeneID:4487552;Name=YP_857370.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;product=pyruvate dehydrogenase E1 component subunit beta;protein_id=YP_857370.1;transl_table=11
NC_008570.1	RefSeq	gene	3216117	3217208	.	-	.	ID=gene2864;Dbxref=GeneID:4487553;Name=AHA_2867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2867
NC_008570.1	RefSeq	CDS	3216117	3217208	.	-	0	ID=cds2786;Parent=gene2864;Dbxref=Genbank:YP_857371.1,GeneID:4487553;Name=YP_857371.1;Note=identified by match to protein family HMM PF00676;gbkey=CDS;product=pyruvate dehydrogenase E1 component subunit alpha;protein_id=YP_857371.1;transl_table=11
NC_008570.1	RefSeq	gene	3217490	3218515	.	-	.	ID=gene2865;Dbxref=GeneID:4487554;Name=AHA_2868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2868
NC_008570.1	RefSeq	CDS	3217490	3218515	.	-	0	ID=cds2787;Parent=gene2865;Dbxref=Genbank:YP_857372.1,GeneID:4487554;Name=YP_857372.1;Note=catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=YP_857372.1;transl_table=11
NC_008570.1	RefSeq	gene	3218791	3219000	.	-	.	ID=gene2866;Dbxref=GeneID:4487555;Name=AHA_2869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2869
NC_008570.1	RefSeq	CDS	3218791	3219000	.	-	0	ID=cds2788;Parent=gene2866;Dbxref=Genbank:YP_857373.1,GeneID:4487555;Name=YP_857373.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857373.1;transl_table=11
NC_008570.1	RefSeq	gene	3219523	3220416	.	+	.	ID=gene2867;Dbxref=GeneID:4488673;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AHA_2870
NC_008570.1	RefSeq	CDS	3219523	3220416	.	+	0	ID=cds2789;Parent=gene2867;Dbxref=Genbank:YP_857374.1,GeneID:4488673;Name=YP_857374.1;Note=identified by match to protein family HMM PF05472%3B match to protein family HMM TIGR02648;gbkey=CDS;gene=tus;product=DNA replication terminus site-binding protein;protein_id=YP_857374.1;transl_table=11
NC_008570.1	RefSeq	gene	3220539	3224381	.	-	.	ID=gene2868;Dbxref=GeneID:4488674;Name=AHA_2871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2871
NC_008570.1	RefSeq	CDS	3220539	3224381	.	-	0	ID=cds2790;Parent=gene2868;Dbxref=Genbank:YP_857375.1,GeneID:4488674;Name=YP_857375.1;Note=identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271;gbkey=CDS;product=SNF2 family helicase;protein_id=YP_857375.1;transl_table=11
NC_008570.1	RefSeq	gene	3224596	3225249	.	-	.	ID=gene2869;Dbxref=GeneID:4488675;Name=AHA_2872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2872
NC_008570.1	RefSeq	CDS	3224596	3225249	.	-	0	ID=cds2791;Parent=gene2869;Dbxref=Genbank:YP_857376.1,GeneID:4488675;Name=YP_857376.1;Note=identified by match to protein family HMM PF04337;gbkey=CDS;product=multidrug resistance protein A;protein_id=YP_857376.1;transl_table=11
NC_008570.1	RefSeq	gene	3225401	3227131	.	-	.	ID=gene2870;Dbxref=GeneID:4488676;Name=AHA_2873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2873
NC_008570.1	RefSeq	CDS	3225401	3227131	.	-	0	ID=cds2792;Parent=gene2870;Dbxref=Genbank:YP_857377.1,GeneID:4488676;Name=YP_857377.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;product=lipid A core - O-antigen ligase;protein_id=YP_857377.1;transl_table=11
NC_008570.1	RefSeq	gene	3227224	3229275	.	-	.	ID=gene2871;Dbxref=GeneID:4488677;Name=AHA_2874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2874
NC_008570.1	RefSeq	CDS	3227224	3229275	.	-	0	ID=cds2793;Parent=gene2871;Dbxref=Genbank:YP_857378.1,GeneID:4488677;Name=YP_857378.1;Note=identified by match to protein family HMM PF06082;gbkey=CDS;product=hypothetical protein;protein_id=YP_857378.1;transl_table=11
NC_008570.1	RefSeq	gene	3229305	3230063	.	-	.	ID=gene2872;Dbxref=GeneID:4488678;Name=AHA_2875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2875
NC_008570.1	RefSeq	CDS	3229305	3230063	.	-	0	ID=cds2794;Parent=gene2872;Dbxref=Genbank:YP_857379.1,GeneID:4488678;Name=YP_857379.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857379.1;transl_table=11
NC_008570.1	RefSeq	gene	3230060	3230749	.	-	.	ID=gene2873;Dbxref=GeneID:4488679;Name=AHA_2876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2876
NC_008570.1	RefSeq	CDS	3230060	3230749	.	-	0	ID=cds2795;Parent=gene2873;Dbxref=Genbank:YP_857380.1,GeneID:4488679;Name=YP_857380.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857380.1;transl_table=11
NC_008570.1	RefSeq	gene	3231196	3233370	.	-	.	ID=gene2874;Dbxref=GeneID:4488680;Name=AHA_2877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2877
NC_008570.1	RefSeq	CDS	3231196	3233370	.	-	0	ID=cds2796;Parent=gene2874;Dbxref=Genbank:YP_857381.1,GeneID:4488680;Name=YP_857381.1;Note=identified by match to protein family HMM PF02706;gbkey=CDS;product=tyrosine-protein kinase;protein_id=YP_857381.1;transl_table=11
NC_008570.1	RefSeq	gene	3233433	3233861	.	-	.	ID=gene2875;Dbxref=GeneID:4488681;Name=AHA_2878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2878
NC_008570.1	RefSeq	CDS	3233433	3233861	.	-	0	ID=cds2797;Parent=gene2875;Dbxref=Genbank:YP_857382.1,GeneID:4488681;Name=YP_857382.1;Note=identified by match to protein family HMM PF01451;gbkey=CDS;product=low molecular weight protein-tyrosine-phosphatase ptp;protein_id=YP_857382.1;transl_table=11
NC_008570.1	RefSeq	gene	3234098	3235213	.	-	.	ID=gene2876;Dbxref=GeneID:4488682;Name=AHA_2879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2879
NC_008570.1	RefSeq	CDS	3234098	3235213	.	-	0	ID=cds2798;Parent=gene2876;Dbxref=Genbank:YP_857383.1,GeneID:4488682;Name=YP_857383.1;Note=identified by match to protein family HMM PF02563;gbkey=CDS;product=capsular polysaccharide transport protein;protein_id=YP_857383.1;transl_table=11
NC_008570.1	RefSeq	gene	3235549	3236715	.	-	.	ID=gene2877;Dbxref=GeneID:4488683;Name=AHA_2880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2880
NC_008570.1	RefSeq	CDS	3235549	3236715	.	-	0	ID=cds2799;Parent=gene2877;Dbxref=Genbank:YP_857384.1,GeneID:4488683;Name=YP_857384.1;Note=identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=YP_857384.1;transl_table=11
NC_008570.1	RefSeq	gene	3236728	3237741	.	-	.	ID=gene2878;Dbxref=GeneID:4488684;Name=AHA_2881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2881
NC_008570.1	RefSeq	CDS	3236728	3237741	.	-	0	ID=cds2800;Parent=gene2878;Dbxref=Genbank:YP_857385.1,GeneID:4488684;Name=YP_857385.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=nucleotide sugar epimerase;protein_id=YP_857385.1;transl_table=11
NC_008570.1	RefSeq	gene	3237765	3238838	.	-	.	ID=gene2879;Dbxref=GeneID:4488685;Name=AHA_2882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2882
NC_008570.1	RefSeq	CDS	3237765	3238838	.	-	0	ID=cds2801;Parent=gene2879;Dbxref=Genbank:YP_857386.1,GeneID:4488685;Name=YP_857386.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857386.1;transl_table=11
NC_008570.1	RefSeq	gene	3238865	3239671	.	-	.	ID=gene2880;Dbxref=GeneID:4488686;Name=AHA_2883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2883
NC_008570.1	RefSeq	CDS	3238865	3239671	.	-	0	ID=cds2802;Parent=gene2880;Dbxref=Genbank:YP_857387.1,GeneID:4488686;Name=YP_857387.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_857387.1;transl_table=11
NC_008570.1	RefSeq	gene	3239673	3240494	.	-	.	ID=gene2881;Dbxref=GeneID:4488687;Name=AHA_2884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2884
NC_008570.1	RefSeq	CDS	3239673	3240494	.	-	0	ID=cds2803;Parent=gene2881;Dbxref=Genbank:YP_857388.1,GeneID:4488687;Name=YP_857388.1;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_857388.1;transl_table=11
NC_008570.1	RefSeq	gene	3240498	3241592	.	-	.	ID=gene2882;Dbxref=GeneID:4488688;Name=AHA_2885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2885
NC_008570.1	RefSeq	CDS	3240498	3241592	.	-	0	ID=cds2804;Parent=gene2882;Dbxref=Genbank:YP_857389.1,GeneID:4488688;Name=YP_857389.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=YP_857389.1;transl_table=11
NC_008570.1	RefSeq	gene	3241655	3242869	.	-	.	ID=gene2883;Dbxref=GeneID:4488689;Name=AHA_2886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2886
NC_008570.1	RefSeq	CDS	3241655	3242869	.	-	0	ID=cds2805;Parent=gene2883;Dbxref=Genbank:YP_857390.1,GeneID:4488689;Name=YP_857390.1;Note=identified by match to protein family HMM PF01943;gbkey=CDS;product=polysaccharide biosynthesis protein;protein_id=YP_857390.1;transl_table=11
NC_008570.1	RefSeq	gene	3242871	3243986	.	-	.	ID=gene2884;Dbxref=GeneID:4488690;Name=AHA_2887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2887
NC_008570.1	RefSeq	CDS	3242871	3243986	.	-	0	ID=cds2806;Parent=gene2884;Dbxref=Genbank:YP_857391.1,GeneID:4488690;Name=YP_857391.1;Note=identified by match to protein family HMM PF01262;gbkey=CDS;product=NAD(P) transhydrogenase subunit alpha;protein_id=YP_857391.1;transl_table=11
NC_008570.1	RefSeq	gene	3243979	3245001	.	-	.	ID=gene2885;Dbxref=GeneID:4488691;Name=AHA_2888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2888
NC_008570.1	RefSeq	CDS	3243979	3245001	.	-	0	ID=cds2807;Parent=gene2885;Dbxref=Genbank:YP_857392.1,GeneID:4488691;Name=YP_857392.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857392.1;transl_table=11
NC_008570.1	RefSeq	gene	3245060	3246139	.	-	.	ID=gene2886;Dbxref=GeneID:4488692;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AHA_2889
NC_008570.1	RefSeq	CDS	3245060	3246139	.	-	0	ID=cds2808;Parent=gene2886;Dbxref=Genbank:YP_857393.1,GeneID:4488692;Name=YP_857393.1;Note=identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR02380;gbkey=CDS;gene=wecA;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase;protein_id=YP_857393.1;transl_table=11
NC_008570.1	RefSeq	gene	3246596	3247573	.	-	.	ID=gene2887;Dbxref=GeneID:4490878;Name=AHA_2890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2890
NC_008570.1	RefSeq	CDS	3246596	3247573	.	-	0	ID=cds2809;Parent=gene2887;Dbxref=Genbank:YP_857394.1,GeneID:4490878;Name=YP_857394.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857394.1;transl_table=11
NC_008570.1	RefSeq	gene	3247664	3249649	.	-	.	ID=gene2888;Dbxref=GeneID:4490879;Name=AHA_2891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2891
NC_008570.1	RefSeq	CDS	3247664	3249649	.	-	0	ID=cds2810;Parent=gene2888;Dbxref=Genbank:YP_857395.1,GeneID:4490879;Name=YP_857395.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993;gbkey=CDS;product=protein WbgZ;protein_id=YP_857395.1;transl_table=11
NC_008570.1	RefSeq	gene	3249646	3250671	.	-	.	ID=gene2889;Dbxref=GeneID:4490880;Name=AHA_2892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2892
NC_008570.1	RefSeq	CDS	3249646	3250671	.	-	0	ID=cds2811;Parent=gene2889;Dbxref=Genbank:YP_857396.1,GeneID:4490880;Name=YP_857396.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=YP_857396.1;transl_table=11
NC_008570.1	RefSeq	gene	3250671	3251675	.	-	.	ID=gene2890;Dbxref=GeneID:4490881;Name=AHA_2893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2893
NC_008570.1	RefSeq	CDS	3250671	3251675	.	-	0	ID=cds2812;Parent=gene2890;Dbxref=Genbank:YP_857397.1,GeneID:4490881;Name=YP_857397.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF03447%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=YP_857397.1;transl_table=11
NC_008570.1	RefSeq	gene	3251641	3252765	.	-	.	ID=gene2891;Dbxref=GeneID:4490882;Name=AHA_2894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2894
NC_008570.1	RefSeq	CDS	3251641	3252765	.	-	0	ID=cds2813;Parent=gene2891;Dbxref=Genbank:YP_857398.1,GeneID:4490882;Name=YP_857398.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=group 1 glycosyl transferase;protein_id=YP_857398.1;transl_table=11
NC_008570.1	RefSeq	gene	3252743	3253231	.	-	.	ID=gene2892;Dbxref=GeneID:4490883;Name=AHA_2895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2895
NC_008570.1	RefSeq	CDS	3252743	3253231	.	-	0	ID=cds2814;Parent=gene2892;Dbxref=Genbank:YP_857399.1,GeneID:4490883;Name=YP_857399.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=GDP-mannose mannosyl hydrolase;protein_id=YP_857399.1;transl_table=11
NC_008570.1	RefSeq	gene	3253246	3253863	.	-	.	ID=gene2893;Dbxref=GeneID:4490884;Name=AHA_2896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2896
NC_008570.1	RefSeq	CDS	3253246	3253863	.	-	0	ID=cds2815;Parent=gene2893;Dbxref=Genbank:YP_857400.1,GeneID:4490884;Name=YP_857400.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=acetyltransferase;protein_id=YP_857400.1;transl_table=11
NC_008570.1	RefSeq	gene	3253868	3255508	.	-	.	ID=gene2894;Dbxref=GeneID:4490885;Name=AHA_2897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2897
NC_008570.1	RefSeq	CDS	3253868	3255508	.	-	0	ID=cds2816;Parent=gene2894;Dbxref=Genbank:YP_857401.1,GeneID:4490885;Name=YP_857401.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=YP_857401.1;transl_table=11
NC_008570.1	RefSeq	gene	3255499	3257784	.	-	.	ID=gene2895;Dbxref=GeneID:4490886;Name=AHA_2898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2898
NC_008570.1	RefSeq	CDS	3255499	3257784	.	-	0	ID=cds2817;Parent=gene2895;Dbxref=Genbank:YP_857402.1,GeneID:4490886;Name=YP_857402.1;gbkey=CDS;product=glycosytransferase;protein_id=YP_857402.1;transl_table=11
NC_008570.1	RefSeq	gene	3257781	3258539	.	-	.	ID=gene2896;Dbxref=GeneID:4490887;Name=AHA_2899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2899
NC_008570.1	RefSeq	CDS	3257781	3258539	.	-	0	ID=cds2818;Parent=gene2896;Dbxref=Genbank:YP_857403.1,GeneID:4490887;Name=YP_857403.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=RfbE%2C O-antigen export system ATP-binding protein RfbE;protein_id=YP_857403.1;transl_table=11
NC_008570.1	RefSeq	gene	3258536	3259321	.	-	.	ID=gene2897;Dbxref=GeneID:4490888;Name=AHA_2900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2900
NC_008570.1	RefSeq	CDS	3258536	3259321	.	-	0	ID=cds2819;Parent=gene2897;Dbxref=Genbank:YP_857404.1,GeneID:4490888;Name=YP_857404.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=ABC transporter permease;protein_id=YP_857404.1;transl_table=11
NC_008570.1	RefSeq	gene	3259386	3260474	.	-	.	ID=gene2898;Dbxref=GeneID:4490889;Name=AHA_2901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2901
NC_008570.1	RefSeq	CDS	3259386	3260474	.	-	0	ID=cds2820;Parent=gene2898;Dbxref=Genbank:YP_857405.1,GeneID:4490889;Name=YP_857405.1;Note=identified by match to protein family HMM PF01041;gbkey=CDS;product=perosamine synthetase%2C Per protein;protein_id=YP_857405.1;transl_table=11
NC_008570.1	RefSeq	gene	3260477	3261598	.	-	.	ID=gene2899;Dbxref=GeneID:4490890;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AHA_2902
NC_008570.1	RefSeq	CDS	3260477	3261598	.	-	0	ID=cds2821;Parent=gene2899;Dbxref=Genbank:YP_857406.1,GeneID:4490890;Name=YP_857406.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM TIGR01472;gbkey=CDS;gene=gmd;product=GDP-mannose 4%2C6-dehydratase;protein_id=YP_857406.1;transl_table=11
NC_008570.1	RefSeq	gene	3261613	3262977	.	-	.	ID=gene2900;Dbxref=GeneID:4490891;Name=AHA_2903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2903
NC_008570.1	RefSeq	CDS	3261613	3262977	.	-	0	ID=cds2822;Parent=gene2900;Dbxref=Genbank:YP_857407.1,GeneID:4490891;Name=YP_857407.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880;gbkey=CDS;product=phosphomannomutase;protein_id=YP_857407.1;transl_table=11
NC_008570.1	RefSeq	gene	3263008	3264405	.	-	.	ID=gene2901;Dbxref=GeneID:4490892;Name=AHA_2904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2904
NC_008570.1	RefSeq	CDS	3263008	3264405	.	-	0	ID=cds2823;Parent=gene2901;Dbxref=Genbank:YP_857408.1,GeneID:4490892;Name=YP_857408.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM PF01050%3B match to protein family HMM PF07883%3B match to protein family HMM TIGR01479;gbkey=CDS;product=mannose-1-phosphate guanylyltransferase;protein_id=YP_857408.1;transl_table=11
NC_008570.1	RefSeq	gene	3264408	3264971	.	-	.	ID=gene2902;Dbxref=GeneID:4490893;Name=rfbC-1;gbkey=Gene;gene=rfbC-1;gene_biotype=protein_coding;locus_tag=AHA_2905
NC_008570.1	RefSeq	CDS	3264408	3264971	.	-	0	ID=cds2824;Parent=gene2902;Dbxref=Genbank:YP_857409.1,GeneID:4490893;Name=YP_857409.1;Note=identified by match to protein family HMM PF00908%3B match to protein family HMM TIGR01221;gbkey=CDS;gene=rfbC-1;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=YP_857409.1;transl_table=11
NC_008570.1	RefSeq	gene	3265028	3265912	.	-	.	ID=gene2903;Dbxref=GeneID:4490894;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AHA_2906
NC_008570.1	RefSeq	CDS	3265028	3265912	.	-	0	ID=cds2825;Parent=gene2903;Dbxref=Genbank:YP_857410.1,GeneID:4490894;Name=YP_857410.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207;gbkey=CDS;gene=rfbA;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_857410.1;transl_table=11
NC_008570.1	RefSeq	gene	3266025	3266912	.	-	.	ID=gene2904;Dbxref=GeneID:4490895;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AHA_2907
NC_008570.1	RefSeq	CDS	3266025	3266912	.	-	0	ID=cds2826;Parent=gene2904;Dbxref=Genbank:YP_857411.1,GeneID:4490895;Name=YP_857411.1;Note=with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose;gbkey=CDS;gene=rfbD;product=dTDP-4-dehydrorhamnose reductase;protein_id=YP_857411.1;transl_table=11
NC_008570.1	RefSeq	gene	3266912	3267997	.	-	.	ID=gene2905;Dbxref=GeneID:4490896;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AHA_2908
NC_008570.1	RefSeq	CDS	3266912	3267997	.	-	0	ID=cds2827;Parent=gene2905;Dbxref=Genbank:YP_857412.1,GeneID:4490896;Name=YP_857412.1;Note=NAD(P) binding%3B catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose;gbkey=CDS;gene=rfbB;product=dTDP-glucose-4%2C6-dehydratase;protein_id=YP_857412.1;transl_table=11
NC_008570.1	RefSeq	gene	3268759	3270174	.	-	.	ID=gene2906;Dbxref=GeneID:4487704;Name=AHA_2909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2909
NC_008570.1	RefSeq	CDS	3268759	3270174	.	-	0	ID=cds2828;Parent=gene2906;Dbxref=Genbank:YP_857413.1,GeneID:4487704;Name=YP_857413.1;Note=identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01845;gbkey=CDS;product=outer membrane protein OprM;protein_id=YP_857413.1;transl_table=11
NC_008570.1	RefSeq	gene	3270167	3273316	.	-	.	ID=gene2907;Dbxref=GeneID:4487705;Name=AHA_2910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2910
NC_008570.1	RefSeq	CDS	3270167	3273316	.	-	0	ID=cds2829;Parent=gene2907;Dbxref=Genbank:YP_857414.1,GeneID:4487705;Name=YP_857414.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915;gbkey=CDS;product=AcrB protein;protein_id=YP_857414.1;transl_table=11
NC_008570.1	RefSeq	gene	3273334	3274527	.	-	.	ID=gene2908;Dbxref=GeneID:4487706;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AHA_2911
NC_008570.1	RefSeq	CDS	3273334	3274527	.	-	0	ID=cds2830;Parent=gene2908;Dbxref=Genbank:YP_857415.1,GeneID:4487706;Name=YP_857415.1;Note=identified by similarity to SP:P31223%3B match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;gene=acrA;product=acriflavin resistance protein A;protein_id=YP_857415.1;transl_table=11
NC_008570.1	RefSeq	gene	3274670	3275311	.	+	.	ID=gene2909;Dbxref=GeneID:4487707;Name=AHA_2912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2912
NC_008570.1	RefSeq	CDS	3274670	3275311	.	+	0	ID=cds2831;Parent=gene2909;Dbxref=Genbank:YP_857416.1,GeneID:4487707;Name=YP_857416.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family regulatory protein;protein_id=YP_857416.1;transl_table=11
NC_008570.1	RefSeq	gene	3274867	3276066	.	+	.	ID=gene2910;Dbxref=GeneID:4487708;Name=AHA_2913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2913
NC_008570.1	RefSeq	CDS	3274867	3276066	.	+	0	ID=cds2832;Parent=gene2910;Dbxref=Genbank:YP_857417.1,GeneID:4487708;Name=YP_857417.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857417.1;transl_table=11
NC_008570.1	RefSeq	gene	3276262	3277440	.	+	.	ID=gene2911;Dbxref=GeneID:4487709;Name=AHA_2914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2914
NC_008570.1	RefSeq	CDS	3276262	3277440	.	+	0	ID=cds2833;Parent=gene2911;Dbxref=Genbank:YP_857418.1,GeneID:4487709;Name=YP_857418.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;product=proton/sodium-glutamate symport protein;protein_id=YP_857418.1;transl_table=11
NC_008570.1	RefSeq	gene	3277489	3277857	.	-	.	ID=gene2912;Dbxref=GeneID:4487710;Name=AHA_2915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2915
NC_008570.1	RefSeq	CDS	3277489	3277857	.	-	0	ID=cds2834;Parent=gene2912;Dbxref=Genbank:YP_857419.1,GeneID:4487710;Name=YP_857419.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_857419.1;transl_table=11
NC_008570.1	RefSeq	gene	3277971	3278843	.	-	.	ID=gene2913;Dbxref=GeneID:4487711;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AHA_2916
NC_008570.1	RefSeq	CDS	3277971	3278843	.	-	0	ID=cds2835;Parent=gene2913;Dbxref=Genbank:YP_857420.1,GeneID:4487711;Name=YP_857420.1;Note=identified by match to protein family HMM PF02551%3B match to protein family HMM TIGR00189;gbkey=CDS;gene=tesB;product=acyl-CoA thioesterase;protein_id=YP_857420.1;transl_table=11
NC_008570.1	RefSeq	gene	3279044	3279967	.	-	.	ID=gene2914;Dbxref=GeneID:4487712;Name=AHA_2917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2917
NC_008570.1	RefSeq	CDS	3279044	3279967	.	-	0	ID=cds2836;Parent=gene2914;Dbxref=Genbank:YP_857421.1,GeneID:4487712;Name=YP_857421.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase B;protein_id=YP_857421.1;transl_table=11
NC_008570.1	RefSeq	gene	3279960	3280556	.	-	.	ID=gene2915;Dbxref=GeneID:4487713;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AHA_2918
NC_008570.1	RefSeq	CDS	3279960	3280556	.	-	0	ID=cds2837;Parent=gene2915;Dbxref=Genbank:YP_857422.1,GeneID:4487713;Name=YP_857422.1;Note=identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;product=segregation and condensation protein B;protein_id=YP_857422.1;transl_table=11
NC_008570.1	RefSeq	gene	3280592	3281548	.	-	.	ID=gene2916;Dbxref=GeneID:4487714;Name=AHA_2919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2919
NC_008570.1	RefSeq	CDS	3280592	3281548	.	-	0	ID=cds2838;Parent=gene2916;Dbxref=Genbank:YP_857423.1,GeneID:4487714;Name=YP_857423.1;Note=identified by match to protein family HMM PF02616;gbkey=CDS;product=segregation and condensation protein A;protein_id=YP_857423.1;transl_table=11
NC_008570.1	RefSeq	gene	3281496	3282185	.	-	.	ID=gene2917;Dbxref=GeneID:4487715;Name=AHA_2920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2920
NC_008570.1	RefSeq	CDS	3281496	3282185	.	-	0	ID=cds2839;Parent=gene2917;Dbxref=Genbank:YP_857424.1,GeneID:4487715;Name=YP_857424.1;Note=identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057;gbkey=CDS;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=YP_857424.1;transl_table=11
NC_008570.1	RefSeq	gene	3282219	3283100	.	-	.	ID=gene2918;Dbxref=GeneID:4487716;Name=AHA_2921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2921
NC_008570.1	RefSeq	CDS	3282219	3283100	.	-	0	ID=cds2840;Parent=gene2918;Dbxref=Genbank:YP_857425.1,GeneID:4487716;Name=YP_857425.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=phosphotransferase domain-containing protein;protein_id=YP_857425.1;transl_table=11
NC_008570.1	RefSeq	region	3283240	3283287	.	+	.	ID=id76;Note=similar to  trp operon leader peptide;gbkey=misc_feature
NC_008570.1	RefSeq	gene	3283538	3285172	.	+	.	ID=gene2919;Dbxref=GeneID:4487718;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AHA_2923
NC_008570.1	RefSeq	CDS	3283538	3285172	.	+	0	ID=cds2841;Parent=gene2919;Dbxref=Genbank:YP_857427.1,GeneID:4487718;Name=YP_857427.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;gene=trpE;product=anthranilate synthase component I;protein_id=YP_857427.1;transl_table=11
NC_008570.1	RefSeq	gene	3285165	3285764	.	+	.	ID=gene2920;Dbxref=GeneID:4487719;Name=AHA_2924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2924
NC_008570.1	RefSeq	CDS	3285165	3285764	.	+	0	ID=cds2842;Parent=gene2920;Dbxref=Genbank:YP_857428.1,GeneID:4487719;Name=YP_857428.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;product=anthranilate synthase component II;protein_id=YP_857428.1;transl_table=11
NC_008570.1	RefSeq	gene	3285775	3286803	.	+	.	ID=gene2921;Dbxref=GeneID:4487720;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AHA_2925
NC_008570.1	RefSeq	CDS	3285775	3286803	.	+	0	ID=cds2843;Parent=gene2921;Dbxref=Genbank:YP_857429.1,GeneID:4487720;Name=YP_857429.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=YP_857429.1;transl_table=11
NC_008570.1	RefSeq	gene	3286914	3288299	.	+	.	ID=gene2922;Dbxref=GeneID:4487721;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;gene_synonym=trpC,trpF;locus_tag=AHA_2926
NC_008570.1	RefSeq	CDS	3286914	3288299	.	+	0	ID=cds2844;Parent=gene2922;Dbxref=Genbank:YP_857430.1,GeneID:4487721;Name=YP_857430.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;gene=trpCF;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=YP_857430.1;transl_table=11
NC_008570.1	RefSeq	gene	3288380	3289573	.	+	.	ID=gene2923;Dbxref=GeneID:4487722;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AHA_2927
NC_008570.1	RefSeq	CDS	3288380	3289573	.	+	0	ID=cds2845;Parent=gene2923;Dbxref=Genbank:YP_857431.1,GeneID:4487722;Name=YP_857431.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;gene=trpB;product=tryptophan synthase subunit beta;protein_id=YP_857431.1;transl_table=11
NC_008570.1	RefSeq	gene	3289570	3290376	.	+	.	ID=gene2924;Dbxref=GeneID:4487723;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AHA_2928
NC_008570.1	RefSeq	CDS	3289570	3290376	.	+	0	ID=cds2846;Parent=gene2924;Dbxref=Genbank:YP_857432.1,GeneID:4487723;Name=YP_857432.1;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;gbkey=CDS;gene=trpA;product=tryptophan synthase subunit alpha;protein_id=YP_857432.1;transl_table=11
NC_008570.1	RefSeq	gene	3291480	3292478	.	+	.	ID=gene2925;Dbxref=GeneID:4489002;Name=AHA_2929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2929
NC_008570.1	RefSeq	CDS	3291480	3292478	.	+	0	ID=cds2847;Parent=gene2925;Dbxref=Genbank:YP_857433.1,GeneID:4489002;Name=YP_857433.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=patatin;protein_id=YP_857433.1;transl_table=11
NC_008570.1	RefSeq	gene	3293338	3293943	.	-	.	ID=gene2926;Dbxref=GeneID:4489003;Name=AHA_2930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2930
NC_008570.1	RefSeq	CDS	3293338	3293943	.	-	0	ID=cds2848;Parent=gene2926;Dbxref=Genbank:YP_857434.1,GeneID:4489003;Name=YP_857434.1;Note=identified by match to protein family HMM PF04307;gbkey=CDS;product=hypothetical protein;protein_id=YP_857434.1;transl_table=11
NC_008570.1	RefSeq	gene	3294085	3294327	.	+	.	ID=gene2927;Dbxref=GeneID:4489004;Name=AHA_2931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2931
NC_008570.1	RefSeq	CDS	3294085	3294327	.	+	0	ID=cds2849;Parent=gene2927;Dbxref=Genbank:YP_857435.1,GeneID:4489004;Name=YP_857435.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857435.1;transl_table=11
NC_008570.1	RefSeq	gene	3294525	3295067	.	+	.	ID=gene2928;Dbxref=GeneID:4489005;Name=AHA_2932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2932
NC_008570.1	RefSeq	CDS	3294525	3295067	.	+	0	ID=cds2850;Parent=gene2928;Dbxref=Genbank:YP_857436.1,GeneID:4489005;Name=YP_857436.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857436.1;transl_table=11
NC_008570.1	RefSeq	gene	3295137	3295580	.	-	.	ID=gene2929;Dbxref=GeneID:4489006;Name=AHA_2933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2933
NC_008570.1	RefSeq	CDS	3295137	3295580	.	-	0	ID=cds2851;Parent=gene2929;Dbxref=Genbank:YP_857437.1,GeneID:4489006;Name=YP_857437.1;gbkey=CDS;product=inhibitor of vertebrate lysozyme;protein_id=YP_857437.1;transl_table=11
NC_008570.1	RefSeq	gene	3295763	3296974	.	-	.	ID=gene2930;Dbxref=GeneID:4489007;Name=AHA_2934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2934
NC_008570.1	RefSeq	CDS	3295763	3296974	.	-	0	ID=cds2852;Parent=gene2930;Dbxref=Genbank:YP_857438.1,GeneID:4489007;Name=YP_857438.1;Note=identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804;gbkey=CDS;product=nucleoside permease NupC;protein_id=YP_857438.1;transl_table=11
NC_008570.1	RefSeq	gene	3297650	3298612	.	+	.	ID=gene2931;Dbxref=GeneID:4489008;Name=AHA_2935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2935
NC_008570.1	RefSeq	CDS	3297650	3298612	.	+	0	ID=cds2853;Parent=gene2931;Dbxref=Genbank:YP_857439.1,GeneID:4489008;Name=YP_857439.1;Note=identified by match to protein family HMM PF02698%3B match to protein family HMM PF07719;gbkey=CDS;product=transporter;protein_id=YP_857439.1;transl_table=11
NC_008570.1	RefSeq	gene	3298985	3299959	.	+	.	ID=gene2932;Dbxref=GeneID:4489009;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AHA_2936
NC_008570.1	RefSeq	CDS	3298985	3299959	.	+	0	ID=cds2854;Parent=gene2932;Dbxref=Genbank:YP_857440.1,GeneID:4489009;Name=YP_857440.1;Note=identified by match to protein family HMM PF04069%3B match to protein family HMM TIGR01729;gbkey=CDS;gene=tauA;product=taurine ABC transporter%2C periplasmic binding protein;protein_id=YP_857440.1;transl_table=11
NC_008570.1	RefSeq	gene	3299983	3300750	.	+	.	ID=gene2933;Dbxref=GeneID:4489010;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AHA_2937
NC_008570.1	RefSeq	CDS	3299983	3300750	.	+	0	ID=cds2855;Parent=gene2933;Dbxref=Genbank:YP_857441.1,GeneID:4489010;Name=YP_857441.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine transporter ATP-binding subunit;protein_id=YP_857441.1;transl_table=11
NC_008570.1	RefSeq	gene	3300747	3301577	.	+	.	ID=gene2934;Dbxref=GeneID:4489011;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AHA_2938
NC_008570.1	RefSeq	CDS	3300747	3301577	.	+	0	ID=cds2856;Parent=gene2934;Dbxref=Genbank:YP_857442.1,GeneID:4489011;Name=YP_857442.1;Note=identified by similarity to Q47539%3B match to protein family HMM PF00528;gbkey=CDS;gene=tauC;product=taurine transporter subunit;protein_id=YP_857442.1;transl_table=11
NC_008570.1	RefSeq	gene	3301574	3302428	.	+	.	ID=gene2935;Dbxref=GeneID:4489012;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AHA_2939
NC_008570.1	RefSeq	CDS	3301574	3302428	.	+	0	ID=cds2857;Parent=gene2935;Dbxref=Genbank:YP_857443.1,GeneID:4489012;Name=YP_857443.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=YP_857443.1;transl_table=11
NC_008570.1	RefSeq	gene	3302680	3304344	.	+	.	ID=gene2936;Dbxref=GeneID:4489013;Name=AHA_2940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2940
NC_008570.1	RefSeq	CDS	3302680	3304344	.	+	0	ID=cds2858;Parent=gene2936;Dbxref=Genbank:YP_857444.1,GeneID:4489013;Name=YP_857444.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=secretory tripeptidyl aminopeptidase;protein_id=YP_857444.1;transl_table=11
NC_008570.1	RefSeq	gene	3304433	3305794	.	-	.	ID=gene2937;Dbxref=GeneID:4489014;Name=AHA_2941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2941
NC_008570.1	RefSeq	CDS	3304433	3305794	.	-	0	ID=cds2859;Parent=gene2937;Dbxref=Genbank:YP_857445.1,GeneID:4489014;Name=YP_857445.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=inner membrane transport protein YajR;protein_id=YP_857445.1;transl_table=11
NC_008570.1	RefSeq	gene	3305984	3306880	.	-	.	ID=gene2938;Dbxref=GeneID:4489015;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AHA_2942
NC_008570.1	RefSeq	CDS	3305984	3306880	.	-	0	ID=cds2860;Parent=gene2938;Dbxref=Genbank:YP_857446.1,GeneID:4489015;Name=YP_857446.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;gene=cyoE;product=protoheme IX farnesyltransferase;protein_id=YP_857446.1;transl_table=11
NC_008570.1	RefSeq	gene	3306892	3307224	.	-	.	ID=gene2939;Dbxref=GeneID:4489016;Name=AHA_2943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2943
NC_008570.1	RefSeq	CDS	3306892	3307224	.	-	0	ID=cds2861;Parent=gene2939;Dbxref=Genbank:YP_857447.1,GeneID:4489016;Name=YP_857447.1;Note=identified by match to protein family HMM PF03626%3B match to protein family HMM TIGR02847;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=YP_857447.1;transl_table=11
NC_008570.1	RefSeq	gene	3307225	3307836	.	-	.	ID=gene2940;Dbxref=GeneID:4489017;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AHA_2944
NC_008570.1	RefSeq	CDS	3307225	3307836	.	-	0	ID=cds2862;Parent=gene2940;Dbxref=Genbank:YP_857448.1,GeneID:4489017;Name=YP_857448.1;Note=identified by match to protein family HMM PF00510%3B match to protein family HMM TIGR02842;gbkey=CDS;gene=cyoC;product=cytochrome o ubiquinol oxidase subunit III;protein_id=YP_857448.1;transl_table=11
NC_008570.1	RefSeq	gene	3307841	3309817	.	-	.	ID=gene2941;Dbxref=GeneID:4489018;Name=AHA_2945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2945
NC_008570.1	RefSeq	CDS	3307841	3309817	.	-	0	ID=cds2863;Parent=gene2941;Dbxref=Genbank:YP_857449.1,GeneID:4489018;Name=YP_857449.1;Note=identified by match to protein family HMM PF00115%3B match to protein family HMM TIGR02843;gbkey=CDS;product=ubiquinol oxidase subunit I;protein_id=YP_857449.1;transl_table=11
NC_008570.1	RefSeq	gene	3309817	3310860	.	-	.	ID=gene2942;Dbxref=GeneID:4489019;Name=AHA_2946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2946
NC_008570.1	RefSeq	CDS	3309817	3310860	.	-	0	ID=cds2864;Parent=gene2942;Dbxref=Genbank:YP_857450.1,GeneID:4489019;Name=YP_857450.1;Note=identified by match to protein family HMM PF00116%3B match to protein family HMM PF06481%3B match to protein family HMM TIGR01433;gbkey=CDS;product=ubiquinol oxidase polypeptide II;protein_id=YP_857450.1;transl_table=11
NC_008570.1	RefSeq	gene	3311497	3313422	.	+	.	ID=gene2943;Dbxref=GeneID:4489020;Name=AHA_2947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2947
NC_008570.1	RefSeq	CDS	3311497	3313422	.	+	0	ID=cds2865;Parent=gene2943;Dbxref=Genbank:YP_857451.1,GeneID:4489020;Name=YP_857451.1;Note=identified by match to protein family HMM TIGR01409;gbkey=CDS;product=twin-arginine translocation pathway signal;protein_id=YP_857451.1;transl_table=11
NC_008570.1	RefSeq	gene	3313419	3314618	.	+	.	ID=gene2944;Dbxref=GeneID:4489541;Name=AHA_2948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2948
NC_008570.1	RefSeq	CDS	3313419	3314618	.	+	0	ID=cds2866;Parent=gene2944;Dbxref=Genbank:YP_857452.1,GeneID:4489541;Name=YP_857452.1;gbkey=CDS;product=cytochrome c family protein;protein_id=YP_857452.1;transl_table=11
NC_008570.1	RefSeq	gene	3314681	3315001	.	-	.	ID=gene2945;Dbxref=GeneID:4489542;Name=AHA_2949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2949
NC_008570.1	RefSeq	CDS	3314681	3315001	.	-	0	ID=cds2867;Parent=gene2945;Dbxref=Genbank:YP_857453.1,GeneID:4489542;Name=YP_857453.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857453.1;transl_table=11
NC_008570.1	RefSeq	gene	3315138	3316106	.	-	.	ID=gene2946;Dbxref=GeneID:4489543;Name=AHA_2950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2950
NC_008570.1	RefSeq	CDS	3315138	3316106	.	-	0	ID=cds2868;Parent=gene2946;Dbxref=Genbank:YP_857454.1,GeneID:4489543;Name=YP_857454.1;Note=identified by match to protein family HMM PF01156;gbkey=CDS;product=inosine-uridine preferring nucleoside hydrolase superfamily protein;protein_id=YP_857454.1;transl_table=11
NC_008570.1	RefSeq	gene	3316318	3316947	.	+	.	ID=gene2947;Dbxref=GeneID:4489544;Name=AHA_2951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2951
NC_008570.1	RefSeq	CDS	3316318	3316947	.	+	0	ID=cds2869;Parent=gene2947;Dbxref=Genbank:YP_857455.1,GeneID:4489544;Name=YP_857455.1;Note=identified by match to protein family HMM PF05962;gbkey=CDS;product=hypothetical protein;protein_id=YP_857455.1;transl_table=11
NC_008570.1	RefSeq	gene	3316973	3317176	.	-	.	ID=gene2948;Dbxref=GeneID:4489545;Name=AHA_2952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2952
NC_008570.1	RefSeq	CDS	3316973	3317176	.	-	0	ID=cds2870;Parent=gene2948;Dbxref=Genbank:YP_857456.1,GeneID:4489545;Name=YP_857456.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857456.1;transl_table=11
NC_008570.1	RefSeq	gene	3317368	3317808	.	-	.	ID=gene2949;Dbxref=GeneID:4489546;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=AHA_2953
NC_008570.1	RefSeq	CDS	3317368	3317808	.	-	0	ID=cds2871;Parent=gene2949;Dbxref=Genbank:YP_857457.1,GeneID:4489546;Name=YP_857457.1;Note=identified by match to protein family HMM PF00127%3B match to protein family HMM TIGR02695;gbkey=CDS;gene=azu;product=azurin;protein_id=YP_857457.1;transl_table=11
NC_008570.1	RefSeq	gene	3318138	3319172	.	+	.	ID=gene2950;Dbxref=GeneID:4489547;Name=AHA_2954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2954
NC_008570.1	RefSeq	CDS	3318138	3319172	.	+	0	ID=cds2872;Parent=gene2950;Dbxref=Genbank:YP_857458.1,GeneID:4489547;Name=YP_857458.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=YP_857458.1;transl_table=11
NC_008570.1	RefSeq	gene	3319283	3320488	.	-	.	ID=gene2951;Dbxref=GeneID:4489548;Name=AHA_2955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2955
NC_008570.1	RefSeq	CDS	3319283	3320488	.	-	0	ID=cds2873;Parent=gene2951;Dbxref=Genbank:YP_857459.1,GeneID:4489548;Name=YP_857459.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator family transporter;protein_id=YP_857459.1;transl_table=11
NC_008570.1	RefSeq	gene	3320617	3322461	.	+	.	ID=gene2952;Dbxref=GeneID:4489549;Name=AHA_2956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2956
NC_008570.1	RefSeq	CDS	3320617	3322461	.	+	0	ID=cds2874;Parent=gene2952;Dbxref=Genbank:YP_857460.1,GeneID:4489549;Name=YP_857460.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=CDS;product=TPR repeat-containing response regulator;protein_id=YP_857460.1;transl_table=11
NC_008570.1	RefSeq	gene	3322516	3323478	.	+	.	ID=gene2953;Dbxref=GeneID:4489550;Name=AHA_2957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2957
NC_008570.1	RefSeq	CDS	3322516	3323478	.	+	0	ID=cds2875;Parent=gene2953;Dbxref=Genbank:YP_857461.1,GeneID:4489550;Name=YP_857461.1;Note=identified by match to protein family HMM PF00805%3B match to protein family HMM PF07885;gbkey=CDS;product=potassium channel protein;protein_id=YP_857461.1;transl_table=11
NC_008570.1	RefSeq	gene	3323590	3324396	.	+	.	ID=gene2954;Dbxref=GeneID:4489551;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=AHA_2958
NC_008570.1	RefSeq	CDS	3323590	3324396	.	+	0	ID=cds2876;Parent=gene2954;Dbxref=Genbank:YP_857462.1,GeneID:4489551;Name=YP_857462.1;Note=identified by similarity to SP:P09030%3B match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633;gbkey=CDS;gene=xth;product=exodeoxyribonuclease III;protein_id=YP_857462.1;transl_table=11
NC_008570.1	RefSeq	gene	3324735	3325934	.	+	.	ID=gene2955;Dbxref=GeneID:4489552;Name=AHA_2959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2959
NC_008570.1	RefSeq	CDS	3324735	3325934	.	+	0	ID=cds2877;Parent=gene2955;Dbxref=Genbank:YP_857463.1,GeneID:4489552;Name=YP_857463.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=acriflavin resistance protein A;protein_id=YP_857463.1;transl_table=11
NC_008570.1	RefSeq	gene	3325944	3329072	.	+	.	ID=gene2956;Dbxref=GeneID:4489553;Name=AHA_2960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2960
NC_008570.1	RefSeq	CDS	3325944	3329072	.	+	0	ID=cds2878;Parent=gene2956;Dbxref=Genbank:YP_857464.1,GeneID:4489553;Name=YP_857464.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915;gbkey=CDS;product=RND efflux transporter;protein_id=YP_857464.1;transl_table=11
NC_008570.1	RefSeq	gene	3329088	3329684	.	+	.	ID=gene2957;Dbxref=GeneID:4489554;Name=AHA_2961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2961
NC_008570.1	RefSeq	CDS	3329088	3329684	.	+	0	ID=cds2879;Parent=gene2957;Dbxref=Genbank:YP_857465.1,GeneID:4489554;Name=YP_857465.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857465.1;transl_table=11
NC_008570.1	RefSeq	gene	3329986	3331485	.	+	.	ID=gene2958;Dbxref=GeneID:4489555;Name=AHA_2962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2962
NC_008570.1	RefSeq	CDS	3329986	3331485	.	+	0	ID=cds2880;Parent=gene2958;Dbxref=Genbank:YP_857466.1,GeneID:4489555;Name=YP_857466.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=copper/silver resistance periplasmic protein;protein_id=YP_857466.1;transl_table=11
NC_008570.1	RefSeq	gene	3331559	3334687	.	+	.	ID=gene2959;Dbxref=GeneID:4489556;Name=AHA_2963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2963
NC_008570.1	RefSeq	CDS	3331559	3334687	.	+	0	ID=cds2881;Parent=gene2959;Dbxref=Genbank:YP_857467.1,GeneID:4489556;Name=YP_857467.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00914;gbkey=CDS;product=cation efflux system protein CusA;protein_id=YP_857467.1;transl_table=11
NC_008570.1	RefSeq	gene	3334692	3335108	.	+	.	ID=gene2960;Dbxref=GeneID:4489557;Name=AHA_2964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2964
NC_008570.1	RefSeq	CDS	3334692	3335108	.	+	0	ID=cds2882;Parent=gene2960;Dbxref=Genbank:YP_857468.1,GeneID:4489557;Name=YP_857468.1;gbkey=CDS;product=secretion protein HlyD;protein_id=YP_857468.1;transl_table=11
NC_008570.1	RefSeq	gene	3335215	3336003	.	-	.	ID=gene2961;Dbxref=GeneID:4489558;Name=AHA_2965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2965
NC_008570.1	RefSeq	CDS	3335215	3336003	.	-	0	ID=cds2883;Parent=gene2961;Dbxref=Genbank:YP_857469.1,GeneID:4489558;Name=YP_857469.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857469.1;transl_table=11
NC_008570.1	RefSeq	gene	3336231	3337925	.	-	.	ID=gene2962;Dbxref=GeneID:4489559;Name=AHA_2966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2966
NC_008570.1	RefSeq	CDS	3336231	3337925	.	-	0	ID=cds2884;Parent=gene2962;Dbxref=Genbank:YP_857470.1,GeneID:4489559;Name=YP_857470.1;Note=identified by match to protein family HMM PF00282;gbkey=CDS;product=decarboxylase%2C group II;protein_id=YP_857470.1;transl_table=11
NC_008570.1	RefSeq	gene	3338114	3339130	.	-	.	ID=gene2963;Dbxref=GeneID:4489560;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AHA_2967
NC_008570.1	RefSeq	CDS	3338114	3339130	.	-	0	ID=cds2885;Parent=gene2963;Dbxref=Genbank:YP_857471.1,GeneID:4489560;Name=YP_857471.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=YP_857471.1;transl_table=11
NC_008570.1	RefSeq	gene	3339575	3342004	.	+	.	ID=gene2964;Dbxref=GeneID:4488904;Name=AHA_2968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2968
NC_008570.1	RefSeq	CDS	3339575	3342004	.	+	0	ID=cds2886;Parent=gene2964;Dbxref=Genbank:YP_857472.1,GeneID:4488904;Name=YP_857472.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF01814%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254%3B match to protein family HMM TIGR02481;gbkey=CDS;product=PAS/GGDEF domain-containing protein;protein_id=YP_857472.1;transl_table=11
NC_008570.1	RefSeq	gene	3342065	3345274	.	-	.	ID=gene2965;Dbxref=GeneID:4488905;Name=AHA_2969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2969
NC_008570.1	RefSeq	CDS	3342065	3345274	.	-	0	ID=cds2887;Parent=gene2965;Dbxref=Genbank:YP_857473.1,GeneID:4488905;Name=YP_857473.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=AcrB/AcrD/AcrF family transporter;protein_id=YP_857473.1;transl_table=11
NC_008570.1	RefSeq	gene	3345267	3346304	.	-	.	ID=gene2966;Dbxref=GeneID:4488906;Name=AHA_2970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2970
NC_008570.1	RefSeq	CDS	3345267	3346304	.	-	0	ID=cds2888;Parent=gene2966;Dbxref=Genbank:YP_857474.1,GeneID:4488906;Name=YP_857474.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=AcrA/AcrE family protein;protein_id=YP_857474.1;transl_table=11
NC_008570.1	RefSeq	gene	3346341	3346796	.	-	.	ID=gene2967;Dbxref=GeneID:4488907;Name=AHA_2971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2971
NC_008570.1	RefSeq	CDS	3346341	3346796	.	-	0	ID=cds2889;Parent=gene2967;Dbxref=Genbank:YP_857475.1,GeneID:4488907;Name=YP_857475.1;Note=identified by match to protein family HMM PF04143;gbkey=CDS;product=hypothetical protein;protein_id=YP_857475.1;transl_table=11
NC_008570.1	RefSeq	gene	3346801	3347211	.	-	.	ID=gene2968;Dbxref=GeneID:4488908;Name=AHA_2972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2972
NC_008570.1	RefSeq	CDS	3346801	3347211	.	-	0	ID=cds2890;Parent=gene2968;Dbxref=Genbank:YP_857476.1,GeneID:4488908;Name=YP_857476.1;Note=identified by match to protein family HMM PF04143;gbkey=CDS;product=hypothetical protein;protein_id=YP_857476.1;transl_table=11
NC_008570.1	RefSeq	gene	3347211	3347528	.	-	.	ID=gene2969;Dbxref=GeneID:4488909;Name=AHA_2973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2973
NC_008570.1	RefSeq	CDS	3347211	3347528	.	-	0	ID=cds2891;Parent=gene2969;Dbxref=Genbank:YP_857477.1,GeneID:4488909;Name=YP_857477.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;product=nodulation protein NolR;protein_id=YP_857477.1;transl_table=11
NC_008570.1	RefSeq	gene	3347616	3347801	.	+	.	ID=gene2970;Dbxref=GeneID:4488910;Name=AHA_2974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2974
NC_008570.1	RefSeq	CDS	3347616	3347801	.	+	0	ID=cds2892;Parent=gene2970;Dbxref=Genbank:YP_857478.1,GeneID:4488910;Name=YP_857478.1;gbkey=CDS;product=inner membrane protein YgaP;protein_id=YP_857478.1;transl_table=11
NC_008570.1	RefSeq	gene	3348219	3348593	.	+	.	ID=gene2971;Dbxref=GeneID:4488911;Name=AHA_2975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2975
NC_008570.1	RefSeq	CDS	3348219	3348593	.	+	0	ID=cds2893;Parent=gene2971;Dbxref=Genbank:YP_857479.1,GeneID:4488911;Name=YP_857479.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857479.1;transl_table=11
NC_008570.1	RefSeq	gene	3348797	3349525	.	+	.	ID=gene2972;Dbxref=GeneID:4488912;Name=AHA_2976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2976
NC_008570.1	RefSeq	CDS	3348797	3349525	.	+	0	ID=cds2894;Parent=gene2972;Dbxref=Genbank:YP_857480.1,GeneID:4488912;Name=YP_857480.1;Note=identified by match to protein family HMM PF02308;gbkey=CDS;product=Mg2+ transporter;protein_id=YP_857480.1;transl_table=11
NC_008570.1	RefSeq	gene	3349602	3350627	.	-	.	ID=gene2973;Dbxref=GeneID:4488913;Name=AHA_2977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2977
NC_008570.1	RefSeq	CDS	3349602	3350627	.	-	0	ID=cds2895;Parent=gene2973;Dbxref=Genbank:YP_857481.1,GeneID:4488913;Name=YP_857481.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=fructose repressor;protein_id=YP_857481.1;transl_table=11
NC_008570.1	RefSeq	gene	3350655	3352070	.	-	.	ID=gene2974;Dbxref=GeneID:4488914;Name=AHA_2978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2978
NC_008570.1	RefSeq	CDS	3350655	3352070	.	-	0	ID=cds2896;Parent=gene2974;Dbxref=Genbank:YP_857482.1,GeneID:4488914;Name=YP_857482.1;Note=identified by match to protein family HMM PF00251%3B match to protein family HMM TIGR01322;gbkey=CDS;product=sucrose-6-phosphate hydrolase;protein_id=YP_857482.1;transl_table=11
NC_008570.1	RefSeq	gene	3352070	3353434	.	-	.	ID=gene2975;Dbxref=GeneID:4488915;Name=AHA_2979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2979
NC_008570.1	RefSeq	CDS	3352070	3353434	.	-	0	ID=cds2897;Parent=gene2975;Dbxref=Genbank:YP_857483.1,GeneID:4488915;Name=YP_857483.1;Note=identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00852%3B match to protein family HMM TIGR01996;gbkey=CDS;product=pts system%2C sucrose-specific IIBC component;protein_id=YP_857483.1;transl_table=11
NC_008570.1	RefSeq	gene	3353518	3354474	.	-	.	ID=gene2976;Dbxref=GeneID:4488916;Name=AHA_2980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2980
NC_008570.1	RefSeq	CDS	3353518	3354474	.	-	0	ID=cds2898;Parent=gene2976;Dbxref=Genbank:YP_857484.1,GeneID:4488916;Name=YP_857484.1;Note=phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)%3B synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least;gbkey=CDS;product=aminoimidazole riboside kinase;protein_id=YP_857484.1;transl_table=11
NC_008570.1	RefSeq	gene	3354590	3356080	.	-	.	ID=gene2977;Dbxref=GeneID:4488917;Name=AHA_2981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2981
NC_008570.1	RefSeq	CDS	3354590	3356080	.	-	0	ID=cds2899;Parent=gene2977;Dbxref=Genbank:YP_857485.1,GeneID:4488917;Name=YP_857485.1;Note=identified by match to protein family HMM PF02264;gbkey=CDS;product=sucrose porin;protein_id=YP_857485.1;transl_table=11
NC_008570.1	RefSeq	gene	3356344	3357486	.	-	.	ID=gene2978;Dbxref=GeneID:4488918;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AHA_2982
NC_008570.1	RefSeq	CDS	3356344	3357486	.	-	0	ID=cds2900;Parent=gene2978;Dbxref=Genbank:YP_857486.1,GeneID:4488918;Name=YP_857486.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;gene=dnaJ;product=molecular chaperone DnaJ;protein_id=YP_857486.1;transl_table=11
NC_008570.1	RefSeq	gene	3357741	3359669	.	-	.	ID=gene2979;Dbxref=GeneID:4488919;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AHA_2983
NC_008570.1	RefSeq	CDS	3357741	3359669	.	-	0	ID=cds2901;Parent=gene2979;Dbxref=Genbank:YP_857487.1,GeneID:4488919;Name=YP_857487.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=YP_857487.1;transl_table=11
NC_008570.1	RefSeq	gene	3359973	3360548	.	-	.	ID=gene2980;Dbxref=GeneID:4488920;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AHA_2984
NC_008570.1	RefSeq	CDS	3359973	3360548	.	-	0	ID=cds2902;Parent=gene2980;Dbxref=Genbank:YP_857488.1,GeneID:4488920;Name=YP_857488.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;gene=grpE;product=heat shock protein GrpE;protein_id=YP_857488.1;transl_table=11
NC_008570.1	RefSeq	gene	3360638	3361702	.	+	.	ID=gene2981;Dbxref=GeneID:4488921;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AHA_2985
NC_008570.1	RefSeq	CDS	3360638	3361702	.	+	0	ID=cds2903;Parent=gene2981;Dbxref=Genbank:YP_857489.1,GeneID:4488921;Name=YP_857489.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate/ATP-NAD kinase;protein_id=YP_857489.1;transl_table=11
NC_008570.1	RefSeq	gene	3361814	3363478	.	+	.	ID=gene2982;Dbxref=GeneID:4488922;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AHA_2986
NC_008570.1	RefSeq	CDS	3361814	3363478	.	+	0	ID=cds2904;Parent=gene2982;Dbxref=Genbank:YP_857490.1,GeneID:4488922;Name=YP_857490.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634;gbkey=CDS;gene=recN;product=recombination and repair protein;protein_id=YP_857490.1;transl_table=11
NC_008570.1	RefSeq	gene	3364060	3364953	.	+	.	ID=gene2983;Dbxref=GeneID:4487880;Name=AHA_2987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2987
NC_008570.1	RefSeq	CDS	3364060	3364953	.	+	0	ID=cds2905;Parent=gene2983;Dbxref=Genbank:YP_857491.1,GeneID:4487880;Name=YP_857491.1;Note=identified by match to protein family HMM PF01368;gbkey=CDS;product=manganese-dependent inorganic pyrophosphatase;protein_id=YP_857491.1;transl_table=11
NC_008570.1	RefSeq	gene	3365314	3365754	.	+	.	ID=gene2984;Dbxref=GeneID:4487881;Name=AHA_2988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2988
NC_008570.1	RefSeq	CDS	3365314	3365754	.	+	0	ID=cds2906;Parent=gene2984;Dbxref=Genbank:YP_857492.1,GeneID:4487881;Name=YP_857492.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857492.1;transl_table=11
NC_008570.1	RefSeq	gene	3365969	3367132	.	+	.	ID=gene2985;Dbxref=GeneID:4487882;Name=AHA_2989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2989
NC_008570.1	RefSeq	CDS	3365969	3367132	.	+	0	ID=cds2907;Parent=gene2985;Dbxref=Genbank:YP_857493.1,GeneID:4487882;Name=YP_857493.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;product=macrolide-specific efflux protein MacA;protein_id=YP_857493.1;transl_table=11
NC_008570.1	RefSeq	gene	3367129	3369072	.	+	.	ID=gene2986;Dbxref=GeneID:4487883;Name=AHA_2990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2990
NC_008570.1	RefSeq	CDS	3367129	3369072	.	+	0	ID=cds2908;Parent=gene2986;Dbxref=Genbank:YP_857494.1,GeneID:4487883;Name=YP_857494.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF02687;gbkey=CDS;product=macrolide-specific ABC-type efflux carrier;protein_id=YP_857494.1;transl_table=11
NC_008570.1	RefSeq	gene	3369069	3370442	.	+	.	ID=gene2987;Dbxref=GeneID:4487884;Name=AHA_2991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2991
NC_008570.1	RefSeq	CDS	3369069	3370442	.	+	0	ID=cds2909;Parent=gene2987;Dbxref=Genbank:YP_857495.1,GeneID:4487884;Name=YP_857495.1;Note=identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01845;gbkey=CDS;product=outer membrane efflux protein;protein_id=YP_857495.1;transl_table=11
NC_008570.1	RefSeq	gene	3370614	3371420	.	+	.	ID=gene2988;Dbxref=GeneID:4487885;Name=AHA_2992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2992
NC_008570.1	RefSeq	CDS	3370614	3371420	.	+	0	ID=cds2910;Parent=gene2988;Dbxref=Genbank:YP_857496.1,GeneID:4487885;Name=YP_857496.1;Note=identified by match to protein family HMM PF04954%3B match to protein family HMM PF08021;gbkey=CDS;product=vibriobactin utilization protein ViuB;protein_id=YP_857496.1;transl_table=11
NC_008570.1	RefSeq	gene	3371634	3372788	.	+	.	ID=gene2989;Dbxref=GeneID:4487886;Name=AHA_2993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2993
NC_008570.1	RefSeq	CDS	3371634	3372788	.	+	0	ID=cds2911;Parent=gene2989;Dbxref=Genbank:YP_857497.1,GeneID:4487886;Name=YP_857497.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose-4-phosphate;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_857497.1;transl_table=11
NC_008570.1	RefSeq	gene	3373371	3373781	.	-	.	ID=gene2990;Dbxref=GeneID:4487887;Name=AHA_2994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2994
NC_008570.1	RefSeq	CDS	3373371	3373781	.	-	0	ID=cds2912;Parent=gene2990;Dbxref=Genbank:YP_857498.1,GeneID:4487887;Name=YP_857498.1;Note=identified by match to protein family HMM PF00816;gbkey=CDS;product=DNA-binding protein StpA;protein_id=YP_857498.1;transl_table=11
NC_008570.1	RefSeq	gene	3374198	3374656	.	-	.	ID=gene2991;Dbxref=GeneID:4487888;Name=AHA_2995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2995
NC_008570.1	RefSeq	CDS	3374198	3374656	.	-	0	ID=cds2913;Parent=gene2991;Dbxref=Genbank:YP_857499.1,GeneID:4487888;Name=YP_857499.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_857499.1;transl_table=11
NC_008570.1	RefSeq	gene	3374807	3375307	.	+	.	ID=gene2992;Dbxref=GeneID:4487889;Name=AHA_2996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2996
NC_008570.1	RefSeq	CDS	3374807	3375307	.	+	0	ID=cds2914;Parent=gene2992;Dbxref=Genbank:YP_857500.1,GeneID:4487889;Name=YP_857500.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857500.1;transl_table=11
NC_008570.1	RefSeq	gene	3375377	3375718	.	-	.	ID=gene2993;Dbxref=GeneID:4488062;Name=AHA_2997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2997
NC_008570.1	RefSeq	CDS	3375377	3375718	.	-	0	ID=cds2915;Parent=gene2993;Dbxref=Genbank:YP_857501.1,GeneID:4488062;Name=YP_857501.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;product=inner membrane protein YhaI;protein_id=YP_857501.1;transl_table=11
NC_008570.1	RefSeq	gene	3376442	3377380	.	+	.	ID=gene2994;Dbxref=GeneID:4488063;Name=AHA_2998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2998
NC_008570.1	RefSeq	CDS	3376442	3377380	.	+	0	ID=cds2916;Parent=gene2994;Dbxref=Genbank:YP_857502.1,GeneID:4488063;Name=YP_857502.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein%2C C terminal;protein_id=YP_857502.1;transl_table=11
NC_008570.1	RefSeq	gene	3377952	3379229	.	-	.	ID=gene2995;Dbxref=GeneID:4488064;Name=AHA_2999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_2999
NC_008570.1	RefSeq	CDS	3377952	3379229	.	-	0	ID=cds2917;Parent=gene2995;Dbxref=Genbank:YP_857503.1,GeneID:4488064;Name=YP_857503.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;product=FAD dependent oxidoreductase;protein_id=YP_857503.1;transl_table=11
NC_008570.1	RefSeq	gene	3379281	3379892	.	-	.	ID=gene2996;Dbxref=GeneID:4488065;Name=AHA_3000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3000
NC_008570.1	RefSeq	CDS	3379281	3379892	.	-	0	ID=cds2918;Parent=gene2996;Dbxref=Genbank:YP_857504.1,GeneID:4488065;Name=YP_857504.1;Note=regulates genes involved in putrescine degradation;gbkey=CDS;product=DNA-binding transcriptional repressor PuuR;protein_id=YP_857504.1;transl_table=11
NC_008570.1	RefSeq	gene	3380203	3381666	.	+	.	ID=gene2997;Dbxref=GeneID:4488066;Name=AHA_3001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3001
NC_008570.1	RefSeq	CDS	3380203	3381666	.	+	0	ID=cds2919;Parent=gene2997;Dbxref=Genbank:YP_857505.1,GeneID:4488066;Name=YP_857505.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01780;gbkey=CDS;product=succinate-semialdehyde dehydrogenase;protein_id=YP_857505.1;transl_table=11
NC_008570.1	RefSeq	gene	3381816	3383105	.	+	.	ID=gene2998;Dbxref=GeneID:4488067;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AHA_3002
NC_008570.1	RefSeq	CDS	3381816	3383105	.	+	0	ID=cds2920;Parent=gene2998;Dbxref=Genbank:YP_857506.1,GeneID:4488067;Name=YP_857506.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202%3B match to protein family HMM TIGR00700;gbkey=CDS;gene=gabT;product=4-aminobutyrate aminotransferase;protein_id=YP_857506.1;transl_table=11
NC_008570.1	RefSeq	gene	3383463	3384806	.	+	.	ID=gene2999;Dbxref=GeneID:4488068;Name=AHA_3003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3003
NC_008570.1	RefSeq	CDS	3383463	3384806	.	+	0	ID=cds2921;Parent=gene2999;Dbxref=Genbank:YP_857507.1,GeneID:4488068;Name=YP_857507.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=YP_857507.1;transl_table=11
NC_008570.1	RefSeq	gene	3385313	3386656	.	+	.	ID=gene3000;Dbxref=GeneID:4488069;Name=AHA_3004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3004
NC_008570.1	RefSeq	CDS	3385313	3386656	.	+	0	ID=cds2922;Parent=gene3000;Dbxref=Genbank:YP_857508.1,GeneID:4488069;Name=YP_857508.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=YP_857508.1;transl_table=11
NC_008570.1	RefSeq	gene	3386755	3387264	.	-	.	ID=gene3001;Dbxref=GeneID:4488070;Name=AHA_3005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3005
NC_008570.1	RefSeq	CDS	3386755	3387264	.	-	0	ID=cds2923;Parent=gene3001;Dbxref=Genbank:YP_857509.1,GeneID:4488070;Name=YP_857509.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857509.1;transl_table=11
NC_008570.1	RefSeq	gene	3387384	3388538	.	+	.	ID=gene3002;Dbxref=GeneID:4488071;Name=AHA_3006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3006
NC_008570.1	RefSeq	CDS	3387384	3388538	.	+	0	ID=cds2924;Parent=gene3002;Dbxref=Genbank:YP_857510.1,GeneID:4488071;Name=YP_857510.1;Note=identified by match to protein family HMM PF02690;gbkey=CDS;product=sodium dependent phosphate pump;protein_id=YP_857510.1;transl_table=11
NC_008570.1	RefSeq	gene	3388706	3389176	.	+	.	ID=gene3003;Dbxref=GeneID:4488072;Name=AHA_3007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3007
NC_008570.1	RefSeq	CDS	3388706	3389176	.	+	0	ID=cds2925;Parent=gene3003;Dbxref=Genbank:YP_857511.1,GeneID:4488072;Name=YP_857511.1;Note=identified by match to protein family HMM PF00254;gbkey=CDS;product=fkbp-type peptidyl-prolyl cis-trans isomerase fkpa;protein_id=YP_857511.1;transl_table=11
NC_008570.1	RefSeq	gene	3389563	3390330	.	+	.	ID=gene3004;Dbxref=GeneID:4488073;Name=AHA_3008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3008
NC_008570.1	RefSeq	CDS	3389563	3390330	.	+	0	ID=cds2926;Parent=gene3004;Dbxref=Genbank:YP_857512.1,GeneID:4488073;Name=YP_857512.1;Note=identified by match to protein family HMM PF02900;gbkey=CDS;product=extradiol ring-cleavage dioxygenase%2C class III enzyme%2C subunit B;protein_id=YP_857512.1;transl_table=11
NC_008570.1	RefSeq	gene	3390494	3393763	.	+	.	ID=gene3005;Dbxref=GeneID:4488074;Name=AHA_3009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3009
NC_008570.1	RefSeq	CDS	3390494	3393763	.	+	0	ID=cds2927;Parent=gene3005;Dbxref=Genbank:YP_857513.1,GeneID:4488074;Name=YP_857513.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=virulence sensor protein BvgS;protein_id=YP_857513.1;transl_table=11
NC_008570.1	RefSeq	gene	3394220	3394921	.	-	.	ID=gene3006;Dbxref=GeneID:4488075;Name=deoD-1;gbkey=Gene;gene=deoD-1;gene_biotype=protein_coding;locus_tag=AHA_3010
NC_008570.1	RefSeq	CDS	3394220	3394921	.	-	0	ID=cds2928;Parent=gene3006;Dbxref=Genbank:YP_857514.1,GeneID:4488075;Name=YP_857514.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD-1;product=purine nucleoside phosphorylase;protein_id=YP_857514.1;transl_table=11
NC_008570.1	RefSeq	gene	3395208	3395618	.	-	.	ID=gene3007;Dbxref=GeneID:4488076;Name=AHA_3011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3011
NC_008570.1	RefSeq	CDS	3395208	3395618	.	-	0	ID=cds2929;Parent=gene3007;Dbxref=Genbank:YP_857515.1,GeneID:4488076;Name=YP_857515.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857515.1;transl_table=11
NC_008570.1	RefSeq	gene	3396182	3397264	.	+	.	ID=gene3008;Dbxref=GeneID:4488077;Name=AHA_3012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3012
NC_008570.1	RefSeq	CDS	3396182	3397264	.	+	0	ID=cds2930;Parent=gene3008;Dbxref=Genbank:YP_857516.1,GeneID:4488077;Name=YP_857516.1;Note=identified by match to protein family HMM PF04607;gbkey=CDS;product=region found in RelA / SpoT proteins;protein_id=YP_857516.1;transl_table=11
NC_008570.1	RefSeq	gene	3397606	3399177	.	-	.	ID=gene3009;Dbxref=GeneID:4488078;Name=AHA_3013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3013
NC_008570.1	RefSeq	CDS	3397606	3399177	.	-	0	ID=cds2931;Parent=gene3009;Dbxref=Genbank:YP_857517.1,GeneID:4488078;Name=YP_857517.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_857517.1;transl_table=11
NC_008570.1	RefSeq	gene	3399584	3400486	.	+	.	ID=gene3010;Dbxref=GeneID:4488079;Name=AHA_3014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3014
NC_008570.1	RefSeq	CDS	3399584	3400486	.	+	0	ID=cds2932;Parent=gene3010;Dbxref=Genbank:YP_857518.1,GeneID:4488079;Name=YP_857518.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857518.1;transl_table=11
NC_008570.1	RefSeq	gene	3401253	3403058	.	-	.	ID=gene3011;Dbxref=GeneID:4488080;Name=AHA_3015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3015
NC_008570.1	RefSeq	CDS	3401253	3403058	.	-	0	ID=cds2933;Parent=gene3011;Dbxref=Genbank:YP_857519.1,GeneID:4488080;Name=YP_857519.1;Note=identified by match to protein family HMM PF07969;gbkey=CDS;product=exoenzymes regulatory protein AepA;protein_id=YP_857519.1;transl_table=11
NC_008570.1	RefSeq	gene	3403482	3404756	.	-	.	ID=gene3012;Dbxref=GeneID:4489041;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AHA_3016
NC_008570.1	RefSeq	CDS	3403482	3404756	.	-	0	ID=cds2934;Parent=gene3012;Dbxref=Genbank:YP_857520.1,GeneID:4489041;Name=YP_857520.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=YP_857520.1;transl_table=11
NC_008570.1	RefSeq	gene	3404753	3405733	.	-	.	ID=gene3013;Dbxref=GeneID:4489042;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AHA_3017
NC_008570.1	RefSeq	CDS	3404753	3405733	.	-	0	ID=cds2935;Parent=gene3013;Dbxref=Genbank:YP_857521.1,GeneID:4489042;Name=YP_857521.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=YP_857521.1;transl_table=11
NC_008570.1	RefSeq	gene	3405736	3408195	.	-	.	ID=gene3014;Dbxref=GeneID:4489043;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AHA_3018
NC_008570.1	RefSeq	CDS	3405736	3408195	.	-	0	ID=cds2936;Parent=gene3014;Dbxref=Genbank:YP_857522.1,GeneID:4489043;Name=YP_857522.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=YP_857522.1;transl_table=11
NC_008570.1	RefSeq	gene	3408319	3408402	.	-	.	ID=gene3015;Dbxref=GeneID:4489044;Name=AHA_3019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3019
NC_008570.1	RefSeq	CDS	3408319	3408402	.	-	0	ID=cds2937;Parent=gene3015;Dbxref=Genbank:YP_857523.1,GeneID:4489044;Name=YP_857523.1;gbkey=CDS;product=thr operon leader peptide;protein_id=YP_857523.1;transl_table=11
NC_008570.1	RefSeq	gene	3408456	3409148	.	-	.	ID=gene3016;Dbxref=GeneID:4489045;Name=AHA_3020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3020
NC_008570.1	RefSeq	CDS	3408456	3409148	.	-	0	ID=cds2938;Parent=gene3016;Dbxref=Genbank:YP_857524.1,GeneID:4489045;Name=YP_857524.1;Note=member of the SPOUT superfamily of methyltransferases;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_857524.1;transl_table=11
NC_008570.1	RefSeq	gene	3409344	3411071	.	+	.	ID=gene3017;Dbxref=GeneID:4489046;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AHA_3021
NC_008570.1	RefSeq	CDS	3409344	3411071	.	+	0	ID=cds2939;Parent=gene3017;Dbxref=Genbank:YP_857525.1,GeneID:4489046;Name=YP_857525.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=YP_857525.1;transl_table=11
NC_008570.1	RefSeq	gene	3411187	3411534	.	-	.	ID=gene3018;Dbxref=GeneID:4489047;Name=AHA_3022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3022
NC_008570.1	RefSeq	CDS	3411187	3411534	.	-	0	ID=cds2940;Parent=gene3018;Dbxref=Genbank:YP_857526.1,GeneID:4489047;Name=YP_857526.1;Note=identified by match to protein family HMM PF03724;gbkey=CDS;product=hypothetical protein;protein_id=YP_857526.1;transl_table=11
NC_008570.1	RefSeq	gene	3411758	3412234	.	+	.	ID=gene3019;Dbxref=GeneID:4489048;Name=AHA_3023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3023
NC_008570.1	RefSeq	CDS	3411758	3412234	.	+	0	ID=cds2941;Parent=gene3019;Dbxref=Genbank:YP_857527.1,GeneID:4489048;Name=YP_857527.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857527.1;transl_table=11
NC_008570.1	RefSeq	gene	3412240	3412719	.	-	.	ID=gene3020;Dbxref=GeneID:4489049;Name=rraA-1;gbkey=Gene;gene=rraA-1;gene_biotype=protein_coding;locus_tag=AHA_3024
NC_008570.1	RefSeq	CDS	3412240	3412719	.	-	0	ID=cds2942;Parent=gene3020;Dbxref=Genbank:YP_857528.1,GeneID:4489049;Name=YP_857528.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;gene=rraA-1;product=ribonuclease activity regulator protein RraA;protein_id=YP_857528.1;transl_table=11
NC_008570.1	RefSeq	gene	3412762	3413178	.	-	.	ID=gene3021;Dbxref=GeneID:4489050;Name=AHA_3025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3025
NC_008570.1	RefSeq	CDS	3412762	3413178	.	-	0	ID=cds2943;Parent=gene3021;Dbxref=Genbank:YP_857529.1,GeneID:4489050;Name=YP_857529.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857529.1;transl_table=11
NC_008570.1	RefSeq	gene	3413555	3414274	.	+	.	ID=gene3022;Dbxref=GeneID:4489051;Name=arcA-1;gbkey=Gene;gene=arcA-1;gene_biotype=protein_coding;locus_tag=AHA_3026
NC_008570.1	RefSeq	CDS	3413555	3414274	.	+	0	ID=cds2944;Parent=gene3022;Dbxref=Genbank:YP_857530.1,GeneID:4489051;Name=YP_857530.1;Note=identified by similarity to SP:P0A9Q1%3B match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=arcA-1;product=two-component response regulator;protein_id=YP_857530.1;transl_table=11
NC_008570.1	RefSeq	gene	3414420	3414494	.	-	.	ID=gene3023;Dbxref=GeneID:4489052;Name=AHA_3027;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3027
NC_008570.1	RefSeq	tRNA	3414420	3414494	.	-	.	ID=rna75;Parent=gene3023;Dbxref=GeneID:4489052;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3414420	3414494	.	-	.	ID=id77;Parent=rna75;Dbxref=GeneID:4489052;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3414589	3414662	.	-	.	ID=gene3024;Dbxref=GeneID:4489053;Name=AHA_3028;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3028
NC_008570.1	RefSeq	tRNA	3414589	3414662	.	-	.	ID=rna76;Parent=gene3024;Dbxref=GeneID:4489053;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3414589	3414662	.	-	.	ID=id78;Parent=rna76;Dbxref=GeneID:4489053;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3414864	3416633	.	+	.	ID=gene3025;Dbxref=GeneID:4489054;Name=AHA_3029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3029
NC_008570.1	RefSeq	CDS	3414864	3416633	.	+	0	ID=cds2945;Parent=gene3025;Dbxref=Genbank:YP_857531.1,GeneID:4489054;Name=YP_857531.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=cysteine/glutathione ABC transporter membrane/ATP-binding protein;protein_id=YP_857531.1;transl_table=11
NC_008570.1	RefSeq	gene	3416626	3418371	.	+	.	ID=gene3026;Dbxref=GeneID:4489055;Name=AHA_3030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3030
NC_008570.1	RefSeq	CDS	3416626	3418371	.	+	0	ID=cds2946;Parent=gene3026;Dbxref=Genbank:YP_857532.1,GeneID:4489055;Name=YP_857532.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=cysteine/glutathione ABC transporter membrane/ATP-binding protein;protein_id=YP_857532.1;transl_table=11
NC_008570.1	RefSeq	gene	3418625	3418996	.	+	.	ID=gene3027;Dbxref=GeneID:4489056;Name=AHA_3031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3031
NC_008570.1	RefSeq	CDS	3418625	3418996	.	+	0	ID=cds2947;Parent=gene3027;Dbxref=Genbank:YP_857533.1,GeneID:4489056;Name=YP_857533.1;gbkey=CDS;product=exopolysaccharide synthesis regulator RcsF;protein_id=YP_857533.1;transl_table=11
NC_008570.1	RefSeq	gene	3419019	3419411	.	+	.	ID=gene3028;Dbxref=GeneID:4489057;Name=AHA_3032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3032
NC_008570.1	RefSeq	CDS	3419019	3419411	.	+	0	ID=cds2948;Parent=gene3028;Dbxref=Genbank:YP_857534.1,GeneID:4489057;Name=YP_857534.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857534.1;transl_table=11
NC_008570.1	RefSeq	gene	3419482	3420462	.	-	.	ID=gene3029;Dbxref=GeneID:4489058;Name=AHA_3033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3033
NC_008570.1	RefSeq	CDS	3419482	3420462	.	-	0	ID=cds2949;Parent=gene3029;Dbxref=Genbank:YP_857535.1,GeneID:4489058;Name=YP_857535.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=isoflavone reductase;protein_id=YP_857535.1;transl_table=11
NC_008570.1	RefSeq	gene	3420710	3421417	.	+	.	ID=gene3030;Dbxref=GeneID:4489059;Name=AHA_3034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3034
NC_008570.1	RefSeq	CDS	3420710	3421417	.	+	0	ID=cds2950;Parent=gene3030;Dbxref=Genbank:YP_857536.1,GeneID:4489059;Name=YP_857536.1;Note=identified by match to protein family HMM PF01980%3B match to protein family HMM TIGR00104;gbkey=CDS;product=hypothetical protein;protein_id=YP_857536.1;transl_table=11
NC_008570.1	RefSeq	gene	3421481	3422602	.	-	.	ID=gene3031;Dbxref=GeneID:4489060;Name=AHA_3035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3035
NC_008570.1	RefSeq	CDS	3421481	3422602	.	-	0	ID=cds2951;Parent=gene3031;Dbxref=Genbank:YP_857537.1,GeneID:4489060;Name=YP_857537.1;Note=catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_857537.1;transl_table=11
NC_008570.1	RefSeq	gene	3422658	3423821	.	-	.	ID=gene3032;Dbxref=GeneID:4490378;Name=AHA_3036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3036
NC_008570.1	RefSeq	CDS	3422658	3423821	.	-	0	ID=cds2952;Parent=gene3032;Dbxref=Genbank:YP_857538.1,GeneID:4490378;Name=YP_857538.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857538.1;transl_table=11
NC_008570.1	RefSeq	gene	3423825	3424667	.	-	.	ID=gene3033;Dbxref=GeneID:4490379;Name=AHA_3037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3037
NC_008570.1	RefSeq	CDS	3423825	3424667	.	-	0	ID=cds2953;Parent=gene3033;Dbxref=Genbank:YP_857539.1,GeneID:4490379;Name=YP_857539.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728;gbkey=CDS;product=ATPase AAA;protein_id=YP_857539.1;transl_table=11
NC_008570.1	RefSeq	gene	3424835	3425803	.	+	.	ID=gene3034;Dbxref=GeneID:4490380;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AHA_3038
NC_008570.1	RefSeq	CDS	3424835	3425803	.	+	0	ID=cds2954;Parent=gene3034;Dbxref=Genbank:YP_857540.1,GeneID:4490380;Name=YP_857540.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=YP_857540.1;transl_table=11
NC_008570.1	RefSeq	gene	3426246	3426503	.	+	.	ID=gene3035;Dbxref=GeneID:4490381;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AHA_3039
NC_008570.1	RefSeq	CDS	3426246	3426503	.	+	0	ID=cds2955;Parent=gene3035;Dbxref=Genbank:YP_857541.1,GeneID:4490381;Name=YP_857541.1;Note=identified by similarity to SP:P16481%3B match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;gene=ptsH;product=phosphocarrier protein PtsH;protein_id=YP_857541.1;transl_table=11
NC_008570.1	RefSeq	gene	3426548	3428275	.	+	.	ID=gene3036;Dbxref=GeneID:4490382;Name=ptsI-2;gbkey=Gene;gene=ptsI-2;gene_biotype=protein_coding;locus_tag=AHA_3040
NC_008570.1	RefSeq	CDS	3426548	3428275	.	+	0	ID=cds2956;Parent=gene3036;Dbxref=Genbank:YP_857542.1,GeneID:4490382;Name=YP_857542.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;gene=ptsI-2;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_857542.1;transl_table=11
NC_008570.1	RefSeq	gene	3428319	3428828	.	+	.	ID=gene3037;Dbxref=GeneID:4490383;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AHA_3041
NC_008570.1	RefSeq	CDS	3428319	3428828	.	+	0	ID=cds2957;Parent=gene3037;Dbxref=Genbank:YP_857543.1,GeneID:4490383;Name=YP_857543.1;Note=functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system%3B functions in the transport and phosphorylation of glucose;gbkey=CDS;gene=crr;product=PTS system glucose-specific transporter;protein_id=YP_857543.1;transl_table=11
NC_008570.1	RefSeq	gene	3428907	3429965	.	-	.	ID=gene3038;Dbxref=GeneID:4490384;Name=AHA_3042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3042
NC_008570.1	RefSeq	CDS	3428907	3429965	.	-	0	ID=cds2958;Parent=gene3038;Dbxref=Genbank:YP_857544.1,GeneID:4490384;Name=YP_857544.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857544.1;transl_table=11
NC_008570.1	RefSeq	gene	3429931	3430749	.	-	.	ID=gene3039;Dbxref=GeneID:4490385;Name=AHA_3043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3043
NC_008570.1	RefSeq	CDS	3429931	3430749	.	-	0	ID=cds2959;Parent=gene3039;Dbxref=Genbank:YP_857545.1,GeneID:4490385;Name=YP_857545.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857545.1;transl_table=11
NC_008570.1	RefSeq	gene	3430969	3431514	.	+	.	ID=gene3040;Dbxref=GeneID:4490386;Name=AHA_3044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3044
NC_008570.1	RefSeq	CDS	3430969	3431514	.	+	0	ID=cds2960;Parent=gene3040;Dbxref=Genbank:YP_857546.1,GeneID:4490386;Name=YP_857546.1;Note=identified by match to protein family HMM PF01292;gbkey=CDS;product=cytochrome b561;protein_id=YP_857546.1;transl_table=11
NC_008570.1	RefSeq	gene	3431598	3435353	.	-	.	ID=gene3041;Dbxref=GeneID:4490387;Name=AHA_3045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3045
NC_008570.1	RefSeq	CDS	3431598	3435353	.	-	0	ID=cds2961;Parent=gene3041;Dbxref=Genbank:YP_857547.1,GeneID:4490387;Name=YP_857547.1;Note=identified by match to protein family HMM PF02463;gbkey=CDS;product=exonuclease SbcC;protein_id=YP_857547.1;transl_table=11
NC_008570.1	RefSeq	gene	3435436	3436662	.	-	.	ID=gene3042;Dbxref=GeneID:4490388;Name=AHA_3046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3046
NC_008570.1	RefSeq	CDS	3435436	3436662	.	-	0	ID=cds2962;Parent=gene3042;Dbxref=Genbank:YP_857548.1,GeneID:4490388;Name=YP_857548.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619;gbkey=CDS;product=nuclease sbcCD subunit D;protein_id=YP_857548.1;transl_table=11
NC_008570.1	RefSeq	gene	3436764	3437192	.	-	.	ID=gene3043;Dbxref=GeneID:4490389;Name=AHA_3047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3047
NC_008570.1	RefSeq	CDS	3436764	3437192	.	-	0	ID=cds2963;Parent=gene3043;Dbxref=Genbank:YP_857549.1,GeneID:4490389;Name=YP_857549.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase YjaB;protein_id=YP_857549.1;transl_table=11
NC_008570.1	RefSeq	gene	3437373	3438284	.	+	.	ID=gene3044;Dbxref=GeneID:4490390;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AHA_3048
NC_008570.1	RefSeq	CDS	3437373	3438284	.	+	0	ID=cds2964;Parent=gene3044;Dbxref=Genbank:YP_857550.1,GeneID:4490390;Name=YP_857550.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;gene=rdgC;product=recombination associated protein;protein_id=YP_857550.1;transl_table=11
NC_008570.1	RefSeq	gene	3438464	3440242	.	+	.	ID=gene3045;Dbxref=GeneID:4490391;Name=AHA_3049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3049
NC_008570.1	RefSeq	CDS	3438464	3440242	.	+	0	ID=cds2965;Parent=gene3045;Dbxref=Genbank:YP_857551.1,GeneID:4490391;Name=YP_857551.1;Note=identified by match to protein family HMM PF01019;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=YP_857551.1;transl_table=11
NC_008570.1	RefSeq	gene	3440629	3442272	.	+	.	ID=gene3046;Dbxref=GeneID:4490392;Name=AHA_3050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3050
NC_008570.1	RefSeq	CDS	3440629	3442272	.	+	0	ID=cds2966;Parent=gene3046;Dbxref=Genbank:YP_857552.1,GeneID:4490392;Name=YP_857552.1;Note=identified by match to protein family HMM PF00999%3B match to protein family HMM PF02254;gbkey=CDS;product=monovalent cation:proton antiporter family protein;protein_id=YP_857552.1;transl_table=11
NC_008570.1	RefSeq	gene	3442315	3443853	.	+	.	ID=gene3047;Dbxref=GeneID:4490393;Name=AHA_3051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3051
NC_008570.1	RefSeq	CDS	3442315	3443853	.	+	0	ID=cds2967;Parent=gene3047;Dbxref=Genbank:YP_857553.1,GeneID:4490393;Name=YP_857553.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF04389;gbkey=CDS;product=leucyl aminopeptidase;protein_id=YP_857553.1;transl_table=11
NC_008570.1	RefSeq	gene	3444421	3445869	.	+	.	ID=gene3048;Dbxref=GeneID:4490394;Name=pyk-3;gbkey=Gene;gene=pyk-3;gene_biotype=protein_coding;locus_tag=AHA_3052
NC_008570.1	RefSeq	CDS	3444421	3445869	.	+	0	ID=cds2968;Parent=gene3048;Dbxref=Genbank:YP_857554.1,GeneID:4490394;Name=YP_857554.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=pyk-3;product=pyruvate kinase;protein_id=YP_857554.1;transl_table=11
NC_008570.1	RefSeq	gene	3446019	3449342	.	+	.	ID=gene3049;Dbxref=GeneID:4490395;Name=kefA;gbkey=Gene;gene=kefA;gene_biotype=protein_coding;locus_tag=AHA_3053
NC_008570.1	RefSeq	CDS	3446019	3449342	.	+	0	ID=cds2969;Parent=gene3049;Dbxref=Genbank:YP_857555.1,GeneID:4490395;Name=YP_857555.1;Note=identified by similarity to SP:P77338%3B match to protein family HMM PF00924;gbkey=CDS;gene=kefA;product=potassium efflux system KefA;protein_id=YP_857555.1;transl_table=11
NC_008570.1	RefSeq	gene	3449552	3450385	.	+	.	ID=gene3050;Dbxref=GeneID:4490396;Name=AHA_3054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3054
NC_008570.1	RefSeq	CDS	3449552	3450385	.	+	0	ID=cds2970;Parent=gene3050;Dbxref=Genbank:YP_857556.1,GeneID:4490396;Name=YP_857556.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857556.1;transl_table=11
NC_008570.1	RefSeq	gene	3450450	3451457	.	+	.	ID=gene3051;Dbxref=GeneID:4487910;Name=AHA_3055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3055
NC_008570.1	RefSeq	CDS	3450450	3451457	.	+	0	ID=cds2971;Parent=gene3051;Dbxref=Genbank:YP_857557.1,GeneID:4487910;Name=YP_857557.1;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=YP_857557.1;transl_table=11
NC_008570.1	RefSeq	gene	3451559	3452854	.	-	.	ID=gene3052;Dbxref=GeneID:4487911;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AHA_3056
NC_008570.1	RefSeq	CDS	3451559	3452854	.	-	0	ID=cds2972;Parent=gene3052;Dbxref=Genbank:YP_857558.1,GeneID:4487911;Name=YP_857558.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;gene=uraA;product=uracil permease;protein_id=YP_857558.1;transl_table=11
NC_008570.1	RefSeq	gene	3453103	3454422	.	+	.	ID=gene3053;Dbxref=GeneID:4487912;Name=AHA_3057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3057
NC_008570.1	RefSeq	CDS	3453103	3454422	.	+	0	ID=cds2973;Parent=gene3053;Dbxref=Genbank:YP_857559.1,GeneID:4487912;Name=YP_857559.1;Note=identified by match to protein family HMM TIGR01443;gbkey=CDS;product=intein-containing protein;protein_id=YP_857559.1;transl_table=11
NC_008570.1	RefSeq	gene	3454419	3454760	.	+	.	ID=gene3054;Dbxref=GeneID:4487913;Name=AHA_3058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3058
NC_008570.1	RefSeq	CDS	3454419	3454760	.	+	0	ID=cds2974;Parent=gene3054;Dbxref=Genbank:YP_857560.1,GeneID:4487913;Name=YP_857560.1;gbkey=CDS;product=17 kDa antigen;protein_id=YP_857560.1;transl_table=11
NC_008570.1	RefSeq	gene	3454830	3456545	.	-	.	ID=gene3055;Dbxref=GeneID:4487914;Name=AHA_3059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3059
NC_008570.1	RefSeq	CDS	3454830	3456545	.	-	0	ID=cds2975;Parent=gene3055;Dbxref=Genbank:YP_857561.1,GeneID:4487914;Name=YP_857561.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_857561.1;transl_table=11
NC_008570.1	RefSeq	gene	3456786	3457916	.	+	.	ID=gene3056;Dbxref=GeneID:4487915;Name=AHA_3060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3060
NC_008570.1	RefSeq	CDS	3456786	3457916	.	+	0	ID=cds2976;Parent=gene3056;Dbxref=Genbank:YP_857562.1,GeneID:4487915;Name=YP_857562.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=two-component hybrid sensor and regulator;protein_id=YP_857562.1;transl_table=11
NC_008570.1	RefSeq	gene	3457985	3458956	.	-	.	ID=gene3057;Dbxref=GeneID:4487916;Name=AHA_3061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3061
NC_008570.1	RefSeq	CDS	3457985	3458956	.	-	0	ID=cds2977;Parent=gene3057;Dbxref=Genbank:YP_857563.1,GeneID:4487916;Name=YP_857563.1;Note=identified by match to protein family HMM TIGR01583;gbkey=CDS;product=formate dehydrogenase%2C cytochrome b556 subunit;protein_id=YP_857563.1;transl_table=11
NC_008570.1	RefSeq	gene	3458953	3459576	.	-	.	ID=gene3058;Dbxref=GeneID:4487917;Name=AHA_3062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3062
NC_008570.1	RefSeq	CDS	3458953	3459576	.	-	0	ID=cds2978;Parent=gene3058;Dbxref=Genbank:YP_857564.1,GeneID:4487917;Name=YP_857564.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=formate dehydrogenase iron-sulfur subunit;protein_id=YP_857564.1;transl_table=11
NC_008570.1	RefSeq	gene	3459581	3462481	.	-	.	ID=gene3059;Dbxref=GeneID:4487918;Name=AHA_3063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3063
NC_008570.1	RefSeq	CDS	3459581	3462481	.	-	0	ID=cds2979;Parent=gene3059;Dbxref=Genbank:YP_857565.1,GeneID:4487918;Name=YP_857565.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01409;gbkey=CDS;product=formate dehydrogenase;protein_id=YP_857565.1;transl_table=11
NC_008570.1	RefSeq	gene	3462505	3462708	.	-	.	ID=gene3060;Dbxref=GeneID:4487919;Name=AHA_3064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3064
NC_008570.1	RefSeq	CDS	3462505	3462708	.	-	0	ID=cds2980;Parent=gene3060;Dbxref=Genbank:YP_857566.1,GeneID:4487919;Name=YP_857566.1;Note=identified by match to protein family HMM TIGR01409%3B match to protein family HMM TIGR02811;gbkey=CDS;product=Tat pathway signal sequence domain-containing protein;protein_id=YP_857566.1;transl_table=11
NC_008570.1	RefSeq	gene	3462778	3463398	.	-	.	ID=gene3061;Dbxref=GeneID:4487920;Name=AHA_3065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3065
NC_008570.1	RefSeq	CDS	3462778	3463398	.	-	0	ID=cds2981;Parent=gene3061;Dbxref=Genbank:YP_857567.1,GeneID:4487920;Name=YP_857567.1;Note=identified by match to protein family HMM PF06192;gbkey=CDS;product=TorD family cytoplasmic chaperone;protein_id=YP_857567.1;transl_table=11
NC_008570.1	RefSeq	gene	3463409	3465139	.	-	.	ID=gene3062;Dbxref=GeneID:4487921;Name=AHA_3066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3066
NC_008570.1	RefSeq	CDS	3463409	3465139	.	-	0	ID=cds2982;Parent=gene3062;Dbxref=Genbank:YP_857568.1,GeneID:4487921;Name=YP_857568.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=YP_857568.1;transl_table=11
NC_008570.1	RefSeq	gene	3465244	3465921	.	-	.	ID=gene3063;Dbxref=GeneID:4487922;Name=AHA_3067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3067
NC_008570.1	RefSeq	CDS	3465244	3465921	.	-	0	ID=cds2983;Parent=gene3063;Dbxref=Genbank:YP_857569.1,GeneID:4487922;Name=YP_857569.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857569.1;transl_table=11
NC_008570.1	RefSeq	gene	3465839	3466429	.	-	.	ID=gene3064;Dbxref=GeneID:4487923;Name=AHA_3068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3068
NC_008570.1	RefSeq	CDS	3465839	3466429	.	-	0	ID=cds2984;Parent=gene3064;Dbxref=Genbank:YP_857570.1,GeneID:4487923;Name=YP_857570.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857570.1;transl_table=11
NC_008570.1	RefSeq	gene	3466704	3467702	.	-	.	ID=gene3065;Dbxref=GeneID:4487924;Name=AHA_3069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3069
NC_008570.1	RefSeq	CDS	3466704	3467702	.	-	0	ID=cds2985;Parent=gene3065;Dbxref=Genbank:YP_857571.1,GeneID:4487924;Name=YP_857571.1;Note=identified by match to protein family HMM PF04313;gbkey=CDS;product=type I restriction enzyme r protein n terminus (hsdr n);protein_id=YP_857571.1;transl_table=11
NC_008570.1	RefSeq	gene	3467969	3468826	.	+	.	ID=gene3066;Dbxref=GeneID:4487925;Name=AHA_3070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3070
NC_008570.1	RefSeq	CDS	3467969	3468826	.	+	0	ID=cds2986;Parent=gene3066;Dbxref=Genbank:YP_857572.1,GeneID:4487925;Name=YP_857572.1;Note=identified by match to protein family HMM PF02634;gbkey=CDS;product=formate dehydrogenase accessory protein;protein_id=YP_857572.1;transl_table=11
NC_008570.1	RefSeq	gene	3468922	3469782	.	+	.	ID=gene3067;Dbxref=GeneID:4487926;Name=AHA_3071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3071
NC_008570.1	RefSeq	CDS	3468922	3469782	.	+	0	ID=cds2987;Parent=gene3067;Dbxref=Genbank:YP_857573.1,GeneID:4487926;Name=YP_857573.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857573.1;transl_table=11
NC_008570.1	RefSeq	gene	3470007	3472100	.	-	.	ID=gene3068;Dbxref=GeneID:4487927;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AHA_3072
NC_008570.1	RefSeq	CDS	3470007	3472100	.	-	0	ID=cds2988;Parent=gene3068;Dbxref=Genbank:YP_857574.1,GeneID:4487927;Name=YP_857574.1;Note=identified by similarity to SP:Q06067%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;gene=atoS;product=sensory box sensor histidine kinase AtoS;protein_id=YP_857574.1;transl_table=11
NC_008570.1	RefSeq	gene	3472132	3473487	.	-	.	ID=gene3069;Dbxref=GeneID:4487928;Name=AHA_3073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3073
NC_008570.1	RefSeq	CDS	3472132	3473487	.	-	0	ID=cds2989;Parent=gene3069;Dbxref=Genbank:YP_857575.1,GeneID:4487928;Name=YP_857575.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=YP_857575.1;transl_table=11
NC_008570.1	RefSeq	gene	3473736	3474578	.	+	.	ID=gene3070;Dbxref=GeneID:4487929;Name=AHA_3074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3074
NC_008570.1	RefSeq	CDS	3473736	3474578	.	+	0	ID=cds2990;Parent=gene3070;Dbxref=Genbank:YP_857576.1,GeneID:4487929;Name=YP_857576.1;gbkey=CDS;product=extracellular tungstate binding protein;protein_id=YP_857576.1;transl_table=11
NC_008570.1	RefSeq	gene	3474646	3475347	.	+	.	ID=gene3071;Dbxref=GeneID:4490455;Name=AHA_3075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3075
NC_008570.1	RefSeq	CDS	3474646	3475347	.	+	0	ID=cds2991;Parent=gene3071;Dbxref=Genbank:YP_857577.1,GeneID:4490455;Name=YP_857577.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=molybdenum transport system permease ModB;protein_id=YP_857577.1;transl_table=11
NC_008570.1	RefSeq	gene	3475463	3476158	.	+	.	ID=gene3072;Dbxref=GeneID:4490456;Name=AHA_3076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3076
NC_008570.1	RefSeq	CDS	3475463	3476158	.	+	0	ID=cds2992;Parent=gene3072;Dbxref=Genbank:YP_857578.1,GeneID:4490456;Name=YP_857578.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=molybdenum transport ATP-binding protein ModC;protein_id=YP_857578.1;transl_table=11
NC_008570.1	RefSeq	gene	3476130	3476768	.	+	.	ID=gene3073;Dbxref=GeneID:4490457;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AHA_3077
NC_008570.1	RefSeq	CDS	3476130	3476768	.	+	0	ID=cds2993;Parent=gene3073;Dbxref=Genbank:YP_857579.1,GeneID:4490457;Name=YP_857579.1;Note=identified by similarity to SP:P32173%3B match to protein family HMM TIGR02665;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=YP_857579.1;transl_table=11
NC_008570.1	RefSeq	gene	3476765	3478510	.	+	.	ID=gene3074;Dbxref=GeneID:4490458;Name=AHA_3078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3078
NC_008570.1	RefSeq	CDS	3476765	3478510	.	+	0	ID=cds2994;Parent=gene3074;Dbxref=Genbank:YP_857580.1,GeneID:4490458;Name=YP_857580.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF03205%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00176%3B match to protein family HMM TIGR00177;gbkey=CDS;product=bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA;protein_id=YP_857580.1;transl_table=11
NC_008570.1	RefSeq	gene	3478574	3479632	.	+	.	ID=gene3075;Dbxref=GeneID:4490459;Name=AHA_3079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3079
NC_008570.1	RefSeq	CDS	3478574	3479632	.	+	0	ID=cds2995;Parent=gene3075;Dbxref=Genbank:YP_857581.1,GeneID:4490459;Name=YP_857581.1;gbkey=CDS;product=inner membrane protein YeeA;protein_id=YP_857581.1;transl_table=11
NC_008570.1	RefSeq	gene	3479703	3481076	.	-	.	ID=gene3076;Dbxref=GeneID:4490460;Name=AHA_3080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3080
NC_008570.1	RefSeq	CDS	3479703	3481076	.	-	0	ID=cds2996;Parent=gene3076;Dbxref=Genbank:YP_857582.1,GeneID:4490460;Name=YP_857582.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=metal-dependent phosphohydrolase;protein_id=YP_857582.1;transl_table=11
NC_008570.1	RefSeq	gene	3481164	3481784	.	-	.	ID=gene3077;Dbxref=GeneID:4490461;Name=AHA_3081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3081
NC_008570.1	RefSeq	CDS	3481164	3481784	.	-	0	ID=cds2997;Parent=gene3077;Dbxref=Genbank:YP_857583.1,GeneID:4490461;Name=YP_857583.1;gbkey=CDS;product=multidrug ABC transporter ATPase/permease;protein_id=YP_857583.1;transl_table=11
NC_008570.1	RefSeq	gene	3481913	3483181	.	-	.	ID=gene3078;Dbxref=GeneID:4490462;Name=AHA_3082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3082
NC_008570.1	RefSeq	CDS	3481913	3483181	.	-	0	ID=cds2998;Parent=gene3078;Dbxref=Genbank:YP_857584.1,GeneID:4490462;Name=YP_857584.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857584.1;transl_table=11
NC_008570.1	RefSeq	gene	3483402	3483863	.	-	.	ID=gene3079;Dbxref=GeneID:4490463;Name=AHA_3083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3083
NC_008570.1	RefSeq	CDS	3483402	3483863	.	-	0	ID=cds2999;Parent=gene3079;Dbxref=Genbank:YP_857585.1,GeneID:4490463;Name=YP_857585.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_857585.1;transl_table=11
NC_008570.1	RefSeq	gene	3483942	3484385	.	-	.	ID=gene3080;Dbxref=GeneID:4490464;Name=AHA_3084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3084
NC_008570.1	RefSeq	CDS	3483942	3484385	.	-	0	ID=cds3000;Parent=gene3080;Dbxref=Genbank:YP_857586.1,GeneID:4490464;Name=YP_857586.1;Note=identified by match to protein family HMM PF07681;gbkey=CDS;product=DoxX protein;protein_id=YP_857586.1;transl_table=11
NC_008570.1	RefSeq	gene	3484391	3485146	.	-	.	ID=gene3081;Dbxref=GeneID:4490465;Name=AHA_3085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3085
NC_008570.1	RefSeq	CDS	3484391	3485146	.	-	0	ID=cds3001;Parent=gene3081;Dbxref=Genbank:YP_857587.1,GeneID:4490465;Name=YP_857587.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857587.1;transl_table=11
NC_008570.1	RefSeq	gene	3485139	3485987	.	-	.	ID=gene3082;Dbxref=GeneID:4490466;Name=AHA_3086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3086
NC_008570.1	RefSeq	CDS	3485139	3485987	.	-	0	ID=cds3002;Parent=gene3082;Dbxref=Genbank:YP_857588.1,GeneID:4490466;Name=YP_857588.1;Note=identified by match to protein family HMM PF05114;gbkey=CDS;product=hypothetical protein;protein_id=YP_857588.1;transl_table=11
NC_008570.1	RefSeq	gene	3486059	3486322	.	-	.	ID=gene3083;Dbxref=GeneID:4490467;Name=AHA_3087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3087
NC_008570.1	RefSeq	CDS	3486059	3486322	.	-	0	ID=cds3003;Parent=gene3083;Dbxref=Genbank:YP_857589.1,GeneID:4490467;Name=YP_857589.1;gbkey=CDS;product=signal peptide protein;protein_id=YP_857589.1;transl_table=11
NC_008570.1	RefSeq	gene	3486681	3486881	.	-	.	ID=gene3084;Dbxref=GeneID:4490468;Name=AHA_3088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3088
NC_008570.1	RefSeq	CDS	3486681	3486881	.	-	0	ID=cds3004;Parent=gene3084;Dbxref=Genbank:YP_857590.1,GeneID:4490468;Name=YP_857590.1;Note=identified by similarity to GB:CAH22153.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857590.1;transl_table=11
NC_008570.1	RefSeq	gene	3487096	3487389	.	+	.	ID=gene3085;Dbxref=GeneID:4490469;Name=AHA_3089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3089
NC_008570.1	RefSeq	CDS	3487096	3487389	.	+	0	ID=cds3005;Parent=gene3085;Dbxref=Genbank:YP_857591.1,GeneID:4490469;Name=YP_857591.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857591.1;transl_table=11
NC_008570.1	RefSeq	gene	3487450	3487523	.	-	.	ID=gene3086;Dbxref=GeneID:4490470;Name=AHA_3090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3090
NC_008570.1	RefSeq	tRNA	3487450	3487523	.	-	.	ID=rna77;Parent=gene3086;Dbxref=GeneID:4490470;gbkey=tRNA;product=tRNA-Cys
NC_008570.1	RefSeq	exon	3487450	3487523	.	-	.	ID=id79;Parent=rna77;Dbxref=GeneID:4490470;gbkey=tRNA;product=tRNA-Cys
NC_008570.1	RefSeq	gene	3487579	3487654	.	-	.	ID=gene3087;Dbxref=GeneID:4490471;Name=AHA_3091;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3091
NC_008570.1	RefSeq	tRNA	3487579	3487654	.	-	.	ID=rna78;Parent=gene3087;Dbxref=GeneID:4490471;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3487579	3487654	.	-	.	ID=id80;Parent=rna78;Dbxref=GeneID:4490471;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3487862	3491341	.	+	.	ID=gene3088;Dbxref=GeneID:4490472;Name=AHA_3092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3092
NC_008570.1	RefSeq	CDS	3487862	3491341	.	+	0	ID=cds3006;Parent=gene3088;Dbxref=Genbank:YP_857592.1,GeneID:4490472;Name=YP_857592.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box sensor histidine kinase/response regulator;protein_id=YP_857592.1;transl_table=11
NC_008570.1	RefSeq	gene	3491744	3493429	.	+	.	ID=gene3089;Dbxref=GeneID:4490473;Name=AHA_3093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3093
NC_008570.1	RefSeq	CDS	3491744	3493429	.	+	0	ID=cds3007;Parent=gene3089;Dbxref=Genbank:YP_857593.1,GeneID:4490473;Name=YP_857593.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=peptide ABC transporter periplasmic peptide-binding protein;protein_id=YP_857593.1;transl_table=11
NC_008570.1	RefSeq	gene	3493549	3494532	.	+	.	ID=gene3090;Dbxref=GeneID:4489021;Name=AHA_3094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3094
NC_008570.1	RefSeq	CDS	3493549	3494532	.	+	0	ID=cds3008;Parent=gene3090;Dbxref=Genbank:YP_857594.1,GeneID:4489021;Name=YP_857594.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_857594.1;transl_table=11
NC_008570.1	RefSeq	gene	3494534	3495454	.	+	.	ID=gene3091;Dbxref=GeneID:4489022;Name=AHA_3095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3095
NC_008570.1	RefSeq	CDS	3494534	3495454	.	+	0	ID=cds3009;Parent=gene3091;Dbxref=Genbank:YP_857595.1,GeneID:4489022;Name=YP_857595.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=chitooligosaccharide transport system permease;protein_id=YP_857595.1;transl_table=11
NC_008570.1	RefSeq	gene	3495451	3496473	.	+	.	ID=gene3092;Dbxref=GeneID:4489023;Name=AHA_3096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3096
NC_008570.1	RefSeq	CDS	3495451	3496473	.	+	0	ID=cds3010;Parent=gene3092;Dbxref=Genbank:YP_857596.1,GeneID:4489023;Name=YP_857596.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;product=peptide ABC transporter%2C ATP-binding protein;protein_id=YP_857596.1;transl_table=11
NC_008570.1	RefSeq	gene	3496485	3497477	.	+	.	ID=gene3093;Dbxref=GeneID:4489024;Name=AHA_3097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3097
NC_008570.1	RefSeq	CDS	3496485	3497477	.	+	0	ID=cds3011;Parent=gene3093;Dbxref=Genbank:YP_857597.1,GeneID:4489024;Name=YP_857597.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=YP_857597.1;transl_table=11
NC_008570.1	RefSeq	gene	3497580	3499313	.	+	.	ID=gene3094;Dbxref=GeneID:4489025;Name=AHA_3098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3098
NC_008570.1	RefSeq	CDS	3497580	3499313	.	+	0	ID=cds3012;Parent=gene3094;Dbxref=Genbank:YP_857598.1,GeneID:4489025;Name=YP_857598.1;Note=identified by match to protein family HMM PF00759;gbkey=CDS;product=endochitinase;protein_id=YP_857598.1;transl_table=11
NC_008570.1	RefSeq	gene	3499306	3500178	.	+	.	ID=gene3095;Dbxref=GeneID:4489026;Name=AHA_3099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3099
NC_008570.1	RefSeq	CDS	3499306	3500178	.	+	0	ID=cds3013;Parent=gene3095;Dbxref=Genbank:YP_857599.1,GeneID:4489026;Name=YP_857599.1;Note=identified by match to protein family HMM PF01869;gbkey=CDS;product=N-acetylglucosamine kinase;protein_id=YP_857599.1;transl_table=11
NC_008570.1	RefSeq	gene	3500339	3502207	.	+	.	ID=gene3096;Dbxref=GeneID:4489027;Name=AHA_3100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3100
NC_008570.1	RefSeq	CDS	3500339	3502207	.	+	0	ID=cds3014;Parent=gene3096;Dbxref=Genbank:YP_857600.1,GeneID:4489027;Name=YP_857600.1;Note=identified by match to protein family HMM PF00728;gbkey=CDS;product=beta-hexosaminidase;protein_id=YP_857600.1;transl_table=11
NC_008570.1	RefSeq	gene	3502424	3503977	.	+	.	ID=gene3097;Dbxref=GeneID:4489028;Name=AHA_3101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3101
NC_008570.1	RefSeq	CDS	3502424	3503977	.	+	0	ID=cds3015;Parent=gene3097;Dbxref=Genbank:YP_857601.1,GeneID:4489028;Name=YP_857601.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;product=aerotaxis receptor Aer;protein_id=YP_857601.1;transl_table=11
NC_008570.1	RefSeq	gene	3504045	3504401	.	+	.	ID=gene3098;Dbxref=GeneID:4489029;Name=AHA_3102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3102
NC_008570.1	RefSeq	CDS	3504045	3504401	.	+	0	ID=cds3016;Parent=gene3098;Dbxref=Genbank:YP_857602.1,GeneID:4489029;Name=YP_857602.1;Note=identified by match to protein family HMM PF01035;gbkey=CDS;product=methylated-DNA binding protein;protein_id=YP_857602.1;transl_table=11
NC_008570.1	RefSeq	gene	3504417	3504698	.	-	.	ID=gene3099;Dbxref=GeneID:4489030;Name=AHA_3103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3103
NC_008570.1	RefSeq	CDS	3504417	3504698	.	-	0	ID=cds3017;Parent=gene3099;Dbxref=Genbank:YP_857603.1,GeneID:4489030;Name=YP_857603.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857603.1;transl_table=11
NC_008570.1	RefSeq	gene	3504699	3507320	.	-	.	ID=gene3100;Dbxref=GeneID:4489031;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AHA_3104
NC_008570.1	RefSeq	CDS	3504699	3507320	.	-	0	ID=cds3018;Parent=gene3100;Dbxref=Genbank:YP_857604.1,GeneID:4489031;Name=YP_857604.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=YP_857604.1;transl_table=11
NC_008570.1	RefSeq	gene	3507682	3509019	.	+	.	ID=gene3101;Dbxref=GeneID:4489032;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AHA_3105
NC_008570.1	RefSeq	CDS	3507682	3509019	.	+	0	ID=cds3019;Parent=gene3101;Dbxref=Genbank:YP_857605.1,GeneID:4489032;Name=YP_857605.1;Note=catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation;gbkey=CDS;gene=astB;product=succinylarginine dihydrolase;protein_id=YP_857605.1;transl_table=11
NC_008570.1	RefSeq	gene	3509106	3510113	.	-	.	ID=gene3102;Dbxref=GeneID:4489033;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AHA_3106
NC_008570.1	RefSeq	CDS	3509106	3510113	.	-	0	ID=cds3020;Parent=gene3102;Dbxref=Genbank:YP_857606.1,GeneID:4489033;Name=YP_857606.1;Note=SohB%3B periplasmic protein%3B member of the peptidase S49 family;gbkey=CDS;gene=sohB;product=periplasmic protease;protein_id=YP_857606.1;transl_table=11
NC_008570.1	RefSeq	gene	3510347	3511102	.	+	.	ID=gene3103;Dbxref=GeneID:4489034;Name=AHA_3107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3107
NC_008570.1	RefSeq	CDS	3510347	3511102	.	+	0	ID=cds3021;Parent=gene3103;Dbxref=Genbank:YP_857607.1,GeneID:4489034;Name=YP_857607.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=YP_857607.1;transl_table=11
NC_008570.1	RefSeq	gene	3511202	3512086	.	+	.	ID=gene3104;Dbxref=GeneID:4489035;Name=AHA_3108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3108
NC_008570.1	RefSeq	CDS	3511202	3512086	.	+	0	ID=cds3022;Parent=gene3104;Dbxref=Genbank:YP_857608.1,GeneID:4489035;Name=YP_857608.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_857608.1;transl_table=11
NC_008570.1	RefSeq	gene	3512153	3513325	.	-	.	ID=gene3105;Dbxref=GeneID:4489036;Name=AHA_3109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3109
NC_008570.1	RefSeq	CDS	3512153	3513325	.	-	0	ID=cds3023;Parent=gene3105;Dbxref=Genbank:YP_857609.1,GeneID:4489036;Name=YP_857609.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=sugar efflux transporter;protein_id=YP_857609.1;transl_table=11
NC_008570.1	RefSeq	gene	3513487	3514623	.	+	.	ID=gene3106;Dbxref=GeneID:4489037;Name=AHA_3110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3110
NC_008570.1	RefSeq	CDS	3513487	3514623	.	+	0	ID=cds3024;Parent=gene3106;Dbxref=Genbank:YP_857610.1,GeneID:4489037;Name=YP_857610.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aminotransferase B;protein_id=YP_857610.1;transl_table=11
NC_008570.1	RefSeq	gene	3514517	3516274	.	+	.	ID=gene3107;Dbxref=GeneID:4489038;Name=AHA_3111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3111
NC_008570.1	RefSeq	CDS	3514517	3516274	.	+	0	ID=cds3025;Parent=gene3107;Dbxref=Genbank:YP_857611.1,GeneID:4489038;Name=YP_857611.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;product=immunogenic protein;protein_id=YP_857611.1;transl_table=11
NC_008570.1	RefSeq	gene	3516345	3517253	.	-	.	ID=gene3108;Dbxref=GeneID:4489039;Name=AHA_3112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3112
NC_008570.1	RefSeq	CDS	3516345	3517253	.	-	0	ID=cds3026;Parent=gene3108;Dbxref=Genbank:YP_857612.1,GeneID:4489039;Name=YP_857612.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_857612.1;transl_table=11
NC_008570.1	RefSeq	gene	3517441	3518697	.	+	.	ID=gene3109;Dbxref=GeneID:4489040;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AHA_3113
NC_008570.1	RefSeq	CDS	3517441	3518697	.	+	0	ID=cds3027;Parent=gene3109;Dbxref=Genbank:YP_857613.1,GeneID:4489040;Name=YP_857613.1;Note=identified by match to protein family HMM PF00709;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=YP_857613.1;transl_table=11
NC_008570.1	RefSeq	gene	3518912	3519448	.	+	.	ID=gene3110;Dbxref=GeneID:4489406;Name=AHA_3114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3114
NC_008570.1	RefSeq	CDS	3518912	3519448	.	+	0	ID=cds3028;Parent=gene3110;Dbxref=Genbank:YP_857614.1,GeneID:4489406;Name=YP_857614.1;Note=identified by match to protein family HMM PF01161%3B match to protein family HMM TIGR00481;gbkey=CDS;product=phosphatidylethanolamine-binding protein;protein_id=YP_857614.1;transl_table=11
NC_008570.1	RefSeq	gene	3519460	3520272	.	+	.	ID=gene3111;Dbxref=GeneID:4489407;Name=AHA_3115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3115
NC_008570.1	RefSeq	CDS	3519460	3520272	.	+	0	ID=cds3029;Parent=gene3111;Dbxref=Genbank:YP_857615.1,GeneID:4489407;Name=YP_857615.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_857615.1;transl_table=11
NC_008570.1	RefSeq	gene	3520457	3522937	.	+	.	ID=gene3112;Dbxref=GeneID:4489408;Name=AHA_3116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3116
NC_008570.1	RefSeq	CDS	3520457	3522937	.	+	0	ID=cds3030;Parent=gene3112;Dbxref=Genbank:YP_857616.1,GeneID:4489408;Name=YP_857616.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=YP_857616.1;transl_table=11
NC_008570.1	RefSeq	gene	3523016	3524215	.	-	.	ID=gene3113;Dbxref=GeneID:4489409;Name=tyrS-2;gbkey=Gene;gene=tyrS-2;gene_biotype=protein_coding;locus_tag=AHA_3117
NC_008570.1	RefSeq	CDS	3523016	3524215	.	-	0	ID=cds3031;Parent=gene3113;Dbxref=Genbank:YP_857617.1,GeneID:4489409;Name=YP_857617.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS-2;product=tyrosyl-tRNA synthetase;protein_id=YP_857617.1;transl_table=11
NC_008570.1	RefSeq	gene	3524330	3525640	.	+	.	ID=gene3114;Dbxref=GeneID:4489410;Name=AHA_3118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3118
NC_008570.1	RefSeq	CDS	3524330	3525640	.	+	0	ID=cds3032;Parent=gene3114;Dbxref=Genbank:YP_857618.1,GeneID:4489410;Name=YP_857618.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=cell wall endopeptidase;protein_id=YP_857618.1;transl_table=11
NC_008570.1	RefSeq	gene	3525781	3526884	.	+	.	ID=gene3115;Dbxref=GeneID:4489411;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=AHA_3119
NC_008570.1	RefSeq	CDS	3525781	3526884	.	+	0	ID=cds3033;Parent=gene3115;Dbxref=Genbank:YP_857619.1,GeneID:4489411;Name=YP_857619.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=YP_857619.1;transl_table=11
NC_008570.1	RefSeq	gene	3526974	3527837	.	-	.	ID=gene3116;Dbxref=GeneID:4489412;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AHA_3120
NC_008570.1	RefSeq	CDS	3526974	3527837	.	-	0	ID=cds3034;Parent=gene3116;Dbxref=Genbank:YP_857620.1,GeneID:4489412;Name=YP_857620.1;Note=Hsp31 stabilizes early unfolding protein intermediates under severe heat stress;gbkey=CDS;gene=hchA;product=chaperone protein HchA;protein_id=YP_857620.1;transl_table=11
NC_008570.1	RefSeq	gene	3527987	3528094	.	+	.	ID=gene3117;Dbxref=GeneID:4489413;Name=AHA_3121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3121
NC_008570.1	RefSeq	CDS	3527987	3528094	.	+	0	ID=cds3035;Parent=gene3117;Dbxref=Genbank:YP_857621.1,GeneID:4489413;Name=YP_857621.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857621.1;transl_table=11
NC_008570.1	RefSeq	gene	3528663	3529928	.	+	.	ID=gene3118;Dbxref=GeneID:4489414;Name=AHA_3122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3122
NC_008570.1	RefSeq	CDS	3528663	3529928	.	+	0	ID=cds3036;Parent=gene3118;Dbxref=Genbank:YP_857622.1,GeneID:4489414;Name=YP_857622.1;Note=identified by match to protein family HMM PF01042;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=YP_857622.1;transl_table=11
NC_008570.1	RefSeq	gene	3530898	3532889	.	-	.	ID=gene3119;Dbxref=GeneID:4489415;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AHA_3123
NC_008570.1	RefSeq	CDS	3530898	3532889	.	-	0	ID=cds3037;Parent=gene3119;Dbxref=Genbank:YP_857623.1,GeneID:4489415;Name=YP_857623.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=tkt;product=transketolase;protein_id=YP_857623.1;transl_table=11
NC_008570.1	RefSeq	gene	3533232	3534383	.	+	.	ID=gene3120;Dbxref=GeneID:4489416;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AHA_3124
NC_008570.1	RefSeq	CDS	3533232	3534383	.	+	0	ID=cds3038;Parent=gene3120;Dbxref=Genbank:YP_857624.1,GeneID:4489416;Name=YP_857624.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=YP_857624.1;transl_table=11
NC_008570.1	RefSeq	gene	3534453	3534986	.	+	.	ID=gene3121;Dbxref=GeneID:4489417;Name=sprT;gbkey=Gene;gene=sprT;gene_biotype=protein_coding;locus_tag=AHA_3125
NC_008570.1	RefSeq	CDS	3534453	3534986	.	+	0	ID=cds3039;Parent=gene3121;Dbxref=Genbank:YP_857625.1,GeneID:4489417;Name=YP_857625.1;Note=identified by match to protein family HMM PF03926;gbkey=CDS;gene=sprT;product=SprT protein;protein_id=YP_857625.1;transl_table=11
NC_008570.1	RefSeq	gene	3534995	3535747	.	+	.	ID=gene3122;Dbxref=GeneID:4489418;Name=AHA_3126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3126
NC_008570.1	RefSeq	CDS	3534995	3535747	.	+	0	ID=cds3040;Parent=gene3122;Dbxref=Genbank:YP_857626.1,GeneID:4489418;Name=YP_857626.1;Note=identified by match to protein family HMM PF04231;gbkey=CDS;product=extracellular deoxyribonuclease;protein_id=YP_857626.1;transl_table=11
NC_008570.1	RefSeq	gene	3535811	3536542	.	+	.	ID=gene3123;Dbxref=GeneID:4489419;Name=AHA_3127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3127
NC_008570.1	RefSeq	CDS	3535811	3536542	.	+	0	ID=cds3041;Parent=gene3123;Dbxref=Genbank:YP_857627.1,GeneID:4489419;Name=YP_857627.1;Note=identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;product=hypothetical protein;protein_id=YP_857627.1;transl_table=11
NC_008570.1	RefSeq	gene	3536657	3537610	.	+	.	ID=gene3124;Dbxref=GeneID:4489420;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AHA_3128
NC_008570.1	RefSeq	CDS	3536657	3537610	.	+	0	ID=cds3042;Parent=gene3124;Dbxref=Genbank:YP_857628.1,GeneID:4489420;Name=YP_857628.1;Note=identified by match to protein family HMM PF02951%3B match to protein family HMM PF02955%3B match to protein family HMM TIGR01380;gbkey=CDS;gene=gshB;product=glutathione synthase;protein_id=YP_857628.1;transl_table=11
NC_008570.1	RefSeq	gene	3537722	3539347	.	-	.	ID=gene3125;Dbxref=GeneID:4489421;Name=AHA_3129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3129
NC_008570.1	RefSeq	CDS	3537722	3539347	.	-	0	ID=cds3043;Parent=gene3125;Dbxref=Genbank:YP_857629.1,GeneID:4489421;Name=YP_857629.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857629.1;transl_table=11
NC_008570.1	RefSeq	gene	3539433	3540020	.	+	.	ID=gene3126;Dbxref=GeneID:4489422;Name=AHA_3130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3130
NC_008570.1	RefSeq	CDS	3539433	3540020	.	+	0	ID=cds3044;Parent=gene3126;Dbxref=Genbank:YP_857630.1,GeneID:4489422;Name=YP_857630.1;Note=identified by match to protein family HMM PF02622;gbkey=CDS;product=hypothetical protein;protein_id=YP_857630.1;transl_table=11
NC_008570.1	RefSeq	gene	3540067	3540489	.	+	.	ID=gene3127;Dbxref=GeneID:4489423;Name=AHA_3131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3131
NC_008570.1	RefSeq	CDS	3540067	3540489	.	+	0	ID=cds3045;Parent=gene3127;Dbxref=Genbank:YP_857631.1,GeneID:4489423;Name=YP_857631.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction resolvase-like protein;protein_id=YP_857631.1;transl_table=11
NC_008570.1	RefSeq	gene	3540536	3542041	.	-	.	ID=gene3128;Dbxref=GeneID:4489424;Name=AHA_3132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3132
NC_008570.1	RefSeq	CDS	3540536	3542041	.	-	0	ID=cds3046;Parent=gene3128;Dbxref=Genbank:YP_857632.1,GeneID:4489424;Name=YP_857632.1;Note=member of the POT family of peptide transporters%3B probable proton-dependent peptide transporter function;gbkey=CDS;product=inner membrane transporter YhiP;protein_id=YP_857632.1;transl_table=11
NC_008570.1	RefSeq	gene	3542593	3543564	.	-	.	ID=gene3129;Dbxref=GeneID:4489774;Name=AHA_3133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3133
NC_008570.1	RefSeq	CDS	3542593	3543564	.	-	0	ID=cds3047;Parent=gene3129;Dbxref=Genbank:YP_857633.1,GeneID:4489774;Name=YP_857633.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YidZ;protein_id=YP_857633.1;transl_table=11
NC_008570.1	RefSeq	gene	3543741	3544523	.	-	.	ID=gene3130;Dbxref=GeneID:4489775;Name=AHA_3134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3134
NC_008570.1	RefSeq	CDS	3543741	3544523	.	-	0	ID=cds3048;Parent=gene3130;Dbxref=Genbank:YP_857634.1,GeneID:4489775;Name=YP_857634.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857634.1;transl_table=11
NC_008570.1	RefSeq	gene	3545770	3547041	.	-	.	ID=gene3131;Dbxref=GeneID:4489776;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AHA_3135
NC_008570.1	RefSeq	CDS	3545770	3547041	.	-	0	ID=cds3049;Parent=gene3131;Dbxref=Genbank:YP_857635.1,GeneID:4489776;Name=YP_857635.1;Note=identified by match to protein family HMM PF00144;gbkey=CDS;gene=ampC;product=beta-lactamase;protein_id=YP_857635.1;transl_table=11
NC_008570.1	RefSeq	gene	3547109	3548029	.	+	.	ID=gene3132;Dbxref=GeneID:4489777;Name=AHA_3136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3136
NC_008570.1	RefSeq	CDS	3547109	3548029	.	+	0	ID=cds3050;Parent=gene3132;Dbxref=Genbank:YP_857636.1,GeneID:4489777;Name=YP_857636.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;product=MoxR protein;protein_id=YP_857636.1;transl_table=11
NC_008570.1	RefSeq	gene	3548029	3549015	.	+	.	ID=gene3133;Dbxref=GeneID:4489778;Name=AHA_3137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3137
NC_008570.1	RefSeq	CDS	3548029	3549015	.	+	0	ID=cds3051;Parent=gene3133;Dbxref=Genbank:YP_857637.1,GeneID:4489778;Name=YP_857637.1;Note=identified by similarity to GB:BAD80406.1%3B match to protein family HMM PF01882;gbkey=CDS;product=hypothetical protein;protein_id=YP_857637.1;transl_table=11
NC_008570.1	RefSeq	gene	3549002	3550975	.	+	.	ID=gene3134;Dbxref=GeneID:4489779;Name=AHA_3138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3138
NC_008570.1	RefSeq	CDS	3549002	3550975	.	+	0	ID=cds3052;Parent=gene3134;Dbxref=Genbank:YP_857638.1,GeneID:4489779;Name=YP_857638.1;Note=identified by match to protein family HMM PF01841;gbkey=CDS;product=hypothetical protein;protein_id=YP_857638.1;transl_table=11
NC_008570.1	RefSeq	gene	3551218	3552660	.	-	.	ID=gene3135;Dbxref=GeneID:4489780;Name=agcS-2;gbkey=Gene;gene=agcS-2;gene_biotype=protein_coding;locus_tag=AHA_3139
NC_008570.1	RefSeq	CDS	3551218	3552660	.	-	0	ID=cds3053;Parent=gene3135;Dbxref=Genbank:YP_857639.1,GeneID:4489780;Name=YP_857639.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS-2;product=amino acid carrier protein;protein_id=YP_857639.1;transl_table=11
NC_008570.1	RefSeq	gene	3553392	3554354	.	+	.	ID=gene3136;Dbxref=GeneID:4489781;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AHA_3140
NC_008570.1	RefSeq	CDS	3553392	3554354	.	+	0	ID=cds3054;Parent=gene3136;Dbxref=Genbank:YP_857640.1,GeneID:4489781;Name=YP_857640.1;Note=identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00874;gbkey=CDS;gene=tal;product=transaldolase B;protein_id=YP_857640.1;transl_table=11
NC_008570.1	RefSeq	gene	3554748	3555296	.	-	.	ID=gene3137;Dbxref=GeneID:4489782;Name=AHA_3141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3141
NC_008570.1	RefSeq	CDS	3554748	3555296	.	-	0	ID=cds3055;Parent=gene3137;Dbxref=Genbank:YP_857641.1,GeneID:4489782;Name=YP_857641.1;Note=identified by match to protein family HMM PF01814;gbkey=CDS;product=hemerythrin HHE cation binding domain-containing protein;protein_id=YP_857641.1;transl_table=11
NC_008570.1	RefSeq	gene	3555454	3556122	.	-	.	ID=gene3138;Dbxref=GeneID:4489783;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AHA_3142
NC_008570.1	RefSeq	CDS	3555454	3556122	.	-	0	ID=cds3056;Parent=gene3138;Dbxref=Genbank:YP_857642.1,GeneID:4489783;Name=YP_857642.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=ung;product=uracil-DNA glycosylase;protein_id=YP_857642.1;transl_table=11
NC_008570.1	RefSeq	gene	3556958	3557338	.	+	.	ID=gene3139;Dbxref=GeneID:4489784;Name=AHA_3143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3143
NC_008570.1	RefSeq	CDS	3556958	3557338	.	+	0	ID=cds3057;Parent=gene3139;Dbxref=Genbank:YP_857643.1,GeneID:4489784;Name=YP_857643.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=YP_857643.1;transl_table=11
NC_008570.1	RefSeq	gene	3557469	3558749	.	-	.	ID=gene3140;Dbxref=GeneID:4489785;Name=AHA_3144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3144
NC_008570.1	RefSeq	CDS	3557469	3558749	.	-	0	ID=cds3058;Parent=gene3140;Dbxref=Genbank:YP_857644.1,GeneID:4489785;Name=YP_857644.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter DctA;protein_id=YP_857644.1;transl_table=11
NC_008570.1	RefSeq	gene	3559056	3559910	.	-	.	ID=gene3141;Dbxref=GeneID:4489786;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AHA_3145
NC_008570.1	RefSeq	CDS	3559056	3559910	.	-	0	ID=cds3059;Parent=gene3141;Dbxref=Genbank:YP_857645.1,GeneID:4489786;Name=YP_857645.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;gene=kdsA;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=YP_857645.1;transl_table=11
NC_008570.1	RefSeq	gene	3560086	3560886	.	-	.	ID=gene3142;Dbxref=GeneID:4489787;Name=AHA_3146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3146
NC_008570.1	RefSeq	CDS	3560086	3560886	.	-	0	ID=cds3060;Parent=gene3142;Dbxref=Genbank:YP_857646.1,GeneID:4489787;Name=YP_857646.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857646.1;transl_table=11
NC_008570.1	RefSeq	gene	3560898	3561281	.	-	.	ID=gene3143;Dbxref=GeneID:4489788;Name=AHA_3147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3147
NC_008570.1	RefSeq	CDS	3560898	3561281	.	-	0	ID=cds3061;Parent=gene3143;Dbxref=Genbank:YP_857647.1,GeneID:4489788;Name=YP_857647.1;Note=identified by match to protein family HMM PF04247;gbkey=CDS;product=invasion gene expression up-regulator;protein_id=YP_857647.1;transl_table=11
NC_008570.1	RefSeq	gene	3561325	3562173	.	-	.	ID=gene3144;Dbxref=GeneID:4489789;Name=AHA_3148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3148
NC_008570.1	RefSeq	CDS	3561325	3562173	.	-	0	ID=cds3062;Parent=gene3144;Dbxref=Genbank:YP_857648.1,GeneID:4489789;Name=YP_857648.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536;gbkey=CDS;product=protein methyltransferase HemK;protein_id=YP_857648.1;transl_table=11
NC_008570.1	RefSeq	gene	3562173	3563261	.	-	.	ID=gene3145;Dbxref=GeneID:4489790;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AHA_3149
NC_008570.1	RefSeq	CDS	3562173	3563261	.	-	0	ID=cds3063;Parent=gene3145;Dbxref=Genbank:YP_857649.1,GeneID:4489790;Name=YP_857649.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=YP_857649.1;transl_table=11
NC_008570.1	RefSeq	gene	3563313	3564650	.	-	.	ID=gene3146;Dbxref=GeneID:4489791;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AHA_3150
NC_008570.1	RefSeq	CDS	3563313	3564650	.	-	0	ID=cds3064;Parent=gene3146;Dbxref=Genbank:YP_857650.1,GeneID:4489791;Name=YP_857650.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=YP_857650.1;transl_table=11
NC_008570.1	RefSeq	gene	3564694	3565278	.	+	.	ID=gene3147;Dbxref=GeneID:4489792;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AHA_3151
NC_008570.1	RefSeq	CDS	3564694	3565278	.	+	0	ID=cds3065;Parent=gene3147;Dbxref=Genbank:YP_857651.1,GeneID:4489792;Name=YP_857651.1;Note=identified by match to protein family HMM PF03550%3B match to protein family HMM TIGR00548;gbkey=CDS;gene=lolB;product=outer membrane lipoprotein LolB;protein_id=YP_857651.1;transl_table=11
NC_008570.1	RefSeq	gene	3565305	3566174	.	+	.	ID=gene3148;Dbxref=GeneID:4489793;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=AHA_3152
NC_008570.1	RefSeq	CDS	3565305	3566174	.	+	0	ID=cds3066;Parent=gene3148;Dbxref=Genbank:YP_857652.1,GeneID:4489793;Name=YP_857652.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=YP_857652.1;transl_table=11
NC_008570.1	RefSeq	gene	3566154	3566228	.	+	.	ID=gene3149;Dbxref=GeneID:4489657;Name=AHA_3153;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3153
NC_008570.1	RefSeq	tRNA	3566154	3566228	.	+	.	ID=rna79;Parent=gene3149;Dbxref=GeneID:4489657;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	exon	3566154	3566228	.	+	.	ID=id81;Parent=rna79;Dbxref=GeneID:4489657;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	gene	3566469	3567485	.	+	.	ID=gene3150;Dbxref=GeneID:4489658;Name=AHA_3154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3154
NC_008570.1	RefSeq	CDS	3566469	3567485	.	+	0	ID=cds3067;Parent=gene3150;Dbxref=Genbank:YP_857653.1,GeneID:4489658;Name=YP_857653.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=YP_857653.1;transl_table=11
NC_008570.1	RefSeq	gene	3567588	3569579	.	+	.	ID=gene3151;Dbxref=GeneID:4489659;Name=AHA_3155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3155
NC_008570.1	RefSeq	CDS	3567588	3569579	.	+	0	ID=cds3068;Parent=gene3151;Dbxref=Genbank:YP_857654.1,GeneID:4489659;Name=YP_857654.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=5'-nucleotidase;protein_id=YP_857654.1;transl_table=11
NC_008570.1	RefSeq	gene	3569777	3570373	.	+	.	ID=gene3152;Dbxref=GeneID:4489660;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AHA_3156
NC_008570.1	RefSeq	CDS	3569777	3570373	.	+	0	ID=cds3069;Parent=gene3152;Dbxref=Genbank:YP_857655.1,GeneID:4489660;Name=YP_857655.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=YP_857655.1;transl_table=11
NC_008570.1	RefSeq	gene	3570608	3571699	.	+	.	ID=gene3153;Dbxref=GeneID:4489661;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AHA_3157
NC_008570.1	RefSeq	CDS	3570608	3571699	.	+	0	ID=cds3070;Parent=gene3153;Dbxref=Genbank:YP_857656.1,GeneID:4489661;Name=YP_857656.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;gene=ychF;product=GTP-binding protein YchF;protein_id=YP_857656.1;transl_table=11
NC_008570.1	RefSeq	gene	3571935	3572011	.	+	.	ID=gene3154;Dbxref=GeneID:4489662;Name=AHA_3158;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3158
NC_008570.1	RefSeq	tRNA	3571935	3572011	.	+	.	ID=rna80;Parent=gene3154;Dbxref=GeneID:4489662;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	3571935	3572011	.	+	.	ID=id82;Parent=rna80;Dbxref=GeneID:4489662;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	3572020	3572094	.	+	.	ID=gene3155;Dbxref=GeneID:4489663;Name=AHA_3159;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3159
NC_008570.1	RefSeq	tRNA	3572020	3572094	.	+	.	ID=rna81;Parent=gene3155;Dbxref=GeneID:4489663;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	exon	3572020	3572094	.	+	.	ID=id83;Parent=rna81;Dbxref=GeneID:4489663;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	gene	3572241	3572315	.	+	.	ID=gene3156;Dbxref=GeneID:4489664;Name=AHA_3160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3160
NC_008570.1	RefSeq	tRNA	3572241	3572315	.	+	.	ID=rna82;Parent=gene3156;Dbxref=GeneID:4489664;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	exon	3572241	3572315	.	+	.	ID=id84;Parent=rna82;Dbxref=GeneID:4489664;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	gene	3572357	3572431	.	+	.	ID=gene3157;Dbxref=GeneID:4489665;Name=AHA_3161;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3161
NC_008570.1	RefSeq	tRNA	3572357	3572431	.	+	.	ID=rna83;Parent=gene3157;Dbxref=GeneID:4489665;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	exon	3572357	3572431	.	+	.	ID=id85;Parent=rna83;Dbxref=GeneID:4489665;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	gene	3572470	3572546	.	+	.	ID=gene3158;Dbxref=GeneID:4489666;Name=AHA_3162;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3162
NC_008570.1	RefSeq	tRNA	3572470	3572546	.	+	.	ID=rna84;Parent=gene3158;Dbxref=GeneID:4489666;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	3572470	3572546	.	+	.	ID=id86;Parent=rna84;Dbxref=GeneID:4489666;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	3572592	3572666	.	+	.	ID=gene3159;Dbxref=GeneID:4489667;Name=AHA_3163;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3163
NC_008570.1	RefSeq	tRNA	3572592	3572666	.	+	.	ID=rna85;Parent=gene3159;Dbxref=GeneID:4489667;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	exon	3572592	3572666	.	+	.	ID=id87;Parent=rna85;Dbxref=GeneID:4489667;gbkey=tRNA;product=tRNA-Gln
NC_008570.1	RefSeq	gene	3572703	3572779	.	+	.	ID=gene3160;Dbxref=GeneID:4489668;Name=AHA_3164;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3164
NC_008570.1	RefSeq	tRNA	3572703	3572779	.	+	.	ID=rna86;Parent=gene3160;Dbxref=GeneID:4489668;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	3572703	3572779	.	+	.	ID=id88;Parent=rna86;Dbxref=GeneID:4489668;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	3572788	3572871	.	+	.	ID=gene3161;Dbxref=GeneID:4489669;Name=AHA_3165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3165
NC_008570.1	RefSeq	tRNA	3572788	3572871	.	+	.	ID=rna87;Parent=gene3161;Dbxref=GeneID:4489669;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	3572788	3572871	.	+	.	ID=id89;Parent=rna87;Dbxref=GeneID:4489669;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	3573107	3574939	.	-	.	ID=gene3162;Dbxref=GeneID:4489670;Name=AHA_3166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3166
NC_008570.1	RefSeq	CDS	3573107	3574939	.	-	0	ID=cds3071;Parent=gene3162;Dbxref=Genbank:YP_857657.1,GeneID:4489670;Name=YP_857657.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;product=citrate transporter;protein_id=YP_857657.1;transl_table=11
NC_008570.1	RefSeq	gene	3575202	3575924	.	+	.	ID=gene3163;Dbxref=GeneID:4489671;Name=AHA_3167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3167
NC_008570.1	RefSeq	CDS	3575202	3575924	.	+	0	ID=cds3072;Parent=gene3163;Dbxref=Genbank:YP_857658.1,GeneID:4489671;Name=YP_857658.1;Note=identified by similarity to SP:P31215%3B match to protein family HMM PF04973%3B match to protein family HMM TIGR01528;gbkey=CDS;product=nicotinamide mononucleotide transporter PnuC;protein_id=YP_857658.1;transl_table=11
NC_008570.1	RefSeq	gene	3575921	3576646	.	+	.	ID=gene3164;Dbxref=GeneID:4489672;Name=AHA_3168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3168
NC_008570.1	RefSeq	CDS	3575921	3576646	.	+	0	ID=cds3073;Parent=gene3164;Dbxref=Genbank:YP_857659.1,GeneID:4489672;Name=YP_857659.1;Note=identified by match to protein family HMM PF01048;gbkey=CDS;product=uridine phosphorylase;protein_id=YP_857659.1;transl_table=11
NC_008570.1	RefSeq	gene	3576735	3577445	.	+	.	ID=gene3165;Dbxref=GeneID:4489673;Name=AHA_3169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3169
NC_008570.1	RefSeq	CDS	3576735	3577445	.	+	0	ID=cds3074;Parent=gene3165;Dbxref=Genbank:YP_857660.1,GeneID:4489673;Name=YP_857660.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cAMP-binding protein;protein_id=YP_857660.1;transl_table=11
NC_008570.1	RefSeq	gene	3577489	3577806	.	+	.	ID=gene3166;Dbxref=GeneID:4489674;Name=AHA_3170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3170
NC_008570.1	RefSeq	CDS	3577489	3577806	.	+	0	ID=cds3075;Parent=gene3166;Dbxref=Genbank:YP_857661.1,GeneID:4489674;Name=YP_857661.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857661.1;transl_table=11
NC_008570.1	RefSeq	gene	3577904	3578275	.	+	.	ID=gene3167;Dbxref=GeneID:4489675;Name=AHA_3171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3171
NC_008570.1	RefSeq	CDS	3577904	3578275	.	+	0	ID=cds3076;Parent=gene3167;Dbxref=Genbank:YP_857662.1,GeneID:4489675;Name=YP_857662.1;Note=identified by match to protein family HMM PF07784;gbkey=CDS;product=hypothetical protein;protein_id=YP_857662.1;transl_table=11
NC_008570.1	RefSeq	gene	3578305	3580116	.	+	.	ID=gene3168;Dbxref=GeneID:4489328;Name=AHA_3172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3172
NC_008570.1	RefSeq	CDS	3578305	3580116	.	+	0	ID=cds3077;Parent=gene3168;Dbxref=Genbank:YP_857663.1,GeneID:4489328;Name=YP_857663.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=YP_857663.1;transl_table=11
NC_008570.1	RefSeq	gene	3580526	3582316	.	+	.	ID=gene3169;Dbxref=GeneID:4489329;Name=AHA_3173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3173
NC_008570.1	RefSeq	CDS	3580526	3582316	.	+	0	ID=cds3078;Parent=gene3169;Dbxref=Genbank:YP_857664.1,GeneID:4489329;Name=YP_857664.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857664.1;transl_table=11
NC_008570.1	RefSeq	gene	3582804	3586349	.	+	.	ID=gene3170;Dbxref=GeneID:4489330;Name=nifJ-2;gbkey=Gene;gene=nifJ-2;gene_biotype=protein_coding;locus_tag=AHA_3174
NC_008570.1	RefSeq	CDS	3582804	3586349	.	+	0	ID=cds3079;Parent=gene3170;Dbxref=Genbank:YP_857665.1,GeneID:4489330;Name=YP_857665.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ-2;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=YP_857665.1;transl_table=11
NC_008570.1	RefSeq	gene	3586417	3587904	.	-	.	ID=gene3171;Dbxref=GeneID:4489331;Name=AHA_3175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3175
NC_008570.1	RefSeq	CDS	3586417	3587904	.	-	0	ID=cds3080;Parent=gene3171;Dbxref=Genbank:YP_857666.1,GeneID:4489331;Name=YP_857666.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=EmrB/QacA family drug resistance transporter;protein_id=YP_857666.1;transl_table=11
NC_008570.1	RefSeq	gene	3587959	3588555	.	+	.	ID=gene3172;Dbxref=GeneID:4489332;Name=AHA_3176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3176
NC_008570.1	RefSeq	CDS	3587959	3588555	.	+	0	ID=cds3081;Parent=gene3172;Dbxref=Genbank:YP_857667.1,GeneID:4489332;Name=YP_857667.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02009;gbkey=CDS;product=phosphatase YqaB;protein_id=YP_857667.1;transl_table=11
NC_008570.1	RefSeq	gene	3588641	3589438	.	-	.	ID=gene3173;Dbxref=GeneID:4489333;Name=AHA_3177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3177
NC_008570.1	RefSeq	CDS	3588641	3589438	.	-	0	ID=cds3082;Parent=gene3173;Dbxref=Genbank:YP_857668.1,GeneID:4489333;Name=YP_857668.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857668.1;transl_table=11
NC_008570.1	RefSeq	gene	3589548	3591017	.	-	.	ID=gene3174;Dbxref=GeneID:4489334;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AHA_3178
NC_008570.1	RefSeq	CDS	3589548	3591017	.	-	0	ID=cds3083;Parent=gene3174;Dbxref=Genbank:YP_857669.1,GeneID:4489334;Name=YP_857669.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=succinylglutamic semialdehyde dehydrogenase;protein_id=YP_857669.1;transl_table=11
NC_008570.1	RefSeq	gene	3591088	3592107	.	-	.	ID=gene3175;Dbxref=GeneID:4489335;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AHA_3179
NC_008570.1	RefSeq	CDS	3591088	3592107	.	-	0	ID=cds3084;Parent=gene3175;Dbxref=Genbank:YP_857670.1,GeneID:4489335;Name=YP_857670.1;Note=identified by match to protein family HMM PF04958;gbkey=CDS;gene=astA;product=arginine N-succinyltransferase subunit beta;protein_id=YP_857670.1;transl_table=11
NC_008570.1	RefSeq	gene	3592183	3593400	.	-	.	ID=gene3176;Dbxref=GeneID:4489336;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=AHA_3180
NC_008570.1	RefSeq	CDS	3592183	3593400	.	-	0	ID=cds3085;Parent=gene3176;Dbxref=Genbank:YP_857671.1,GeneID:4489336;Name=YP_857671.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase;protein_id=YP_857671.1;transl_table=11
NC_008570.1	RefSeq	gene	3593678	3594259	.	-	.	ID=gene3177;Dbxref=GeneID:4489337;Name=AHA_3181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3181
NC_008570.1	RefSeq	CDS	3593678	3594259	.	-	0	ID=cds3086;Parent=gene3177;Dbxref=Genbank:YP_857672.1,GeneID:4489337;Name=YP_857672.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;product=para-aminobenzoate synthase glutamine amidotransferase component II;protein_id=YP_857672.1;transl_table=11
NC_008570.1	RefSeq	gene	3594280	3594495	.	-	.	ID=gene3178;Dbxref=GeneID:4489338;Name=AHA_3182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3182
NC_008570.1	RefSeq	CDS	3594280	3594495	.	-	0	ID=cds3087;Parent=gene3178;Dbxref=Genbank:YP_857673.1,GeneID:4489338;Name=YP_857673.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857673.1;transl_table=11
NC_008570.1	RefSeq	gene	3594619	3595623	.	-	.	ID=gene3179;Dbxref=GeneID:4489339;Name=trpS-2;gbkey=Gene;gene=trpS-2;gene_biotype=protein_coding;locus_tag=AHA_3183
NC_008570.1	RefSeq	CDS	3594619	3595623	.	-	0	ID=cds3088;Parent=gene3179;Dbxref=Genbank:YP_857674.1,GeneID:4489339;Name=YP_857674.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS-2;product=tryptophanyl-tRNA synthetase;protein_id=YP_857674.1;transl_table=11
NC_008570.1	RefSeq	gene	3595663	3596331	.	-	.	ID=gene3180;Dbxref=GeneID:4489340;Name=gph-2;gbkey=Gene;gene=gph-2;gene_biotype=protein_coding;locus_tag=AHA_3184
NC_008570.1	RefSeq	CDS	3595663	3596331	.	-	0	ID=cds3089;Parent=gene3180;Dbxref=Genbank:YP_857675.1,GeneID:4489340;Name=YP_857675.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01449%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;gene=gph-2;product=phosphoglycolate phosphatase;protein_id=YP_857675.1;transl_table=11
NC_008570.1	RefSeq	gene	3596318	3597130	.	-	.	ID=gene3181;Dbxref=GeneID:4489341;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AHA_3185
NC_008570.1	RefSeq	CDS	3596318	3597130	.	-	0	ID=cds3090;Parent=gene3181;Dbxref=Genbank:YP_857676.1,GeneID:4489341;Name=YP_857676.1;Note=identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=YP_857676.1;transl_table=11
NC_008570.1	RefSeq	gene	3597382	3598254	.	-	.	ID=gene3182;Dbxref=GeneID:4489342;Name=AHA_3186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3186
NC_008570.1	RefSeq	CDS	3597382	3598254	.	-	0	ID=cds3091;Parent=gene3182;Dbxref=REBASE:M.AhyTDamP,Genbank:YP_857677.1,GeneID:4489342;Name=YP_857677.1;Note=identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571;gbkey=CDS;product=DNA adenine methylase;protein_id=YP_857677.1;transl_table=11
NC_008570.1	RefSeq	gene	3598325	3599932	.	-	.	ID=gene3183;Dbxref=GeneID:4489343;Name=AHA_3187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3187
NC_008570.1	RefSeq	CDS	3598325	3599932	.	-	0	ID=cds3092;Parent=gene3183;Dbxref=Genbank:YP_857678.1,GeneID:4489343;Name=YP_857678.1;Note=identified by match to protein family HMM PF05036;gbkey=CDS;product=DamX-like protein;protein_id=YP_857678.1;transl_table=11
NC_008570.1	RefSeq	gene	3599922	3601004	.	-	.	ID=gene3184;Dbxref=GeneID:4489344;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AHA_3188
NC_008570.1	RefSeq	CDS	3599922	3601004	.	-	0	ID=cds3093;Parent=gene3184;Dbxref=Genbank:YP_857679.1,GeneID:4489344;Name=YP_857679.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=YP_857679.1;transl_table=11
NC_008570.1	RefSeq	gene	3601019	3601537	.	-	.	ID=gene3185;Dbxref=GeneID:4489345;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AHA_3189
NC_008570.1	RefSeq	CDS	3601019	3601537	.	-	0	ID=cds3094;Parent=gene3185;Dbxref=Genbank:YP_857680.1,GeneID:4489345;Name=YP_857680.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase I;protein_id=YP_857680.1;transl_table=11
NC_008570.1	RefSeq	gene	3601729	3603930	.	-	.	ID=gene3186;Dbxref=GeneID:4489346;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=AHA_3190
NC_008570.1	RefSeq	CDS	3601729	3603930	.	-	0	ID=cds3095;Parent=gene3186;Dbxref=Genbank:YP_857681.1,GeneID:4489346;Name=YP_857681.1;Note=identified by match to protein family HMM PF00263%3B match to protein family HMM PF03958%3B match to protein family HMM PF07660%3B match to protein family HMM TIGR02515;gbkey=CDS;gene=pilQ;product=type IV pilus secretin PilQ;protein_id=YP_857681.1;transl_table=11
NC_008570.1	RefSeq	gene	3603945	3604475	.	-	.	ID=gene3187;Dbxref=GeneID:4489347;Name=AHA_3191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3191
NC_008570.1	RefSeq	CDS	3603945	3604475	.	-	0	ID=cds3096;Parent=gene3187;Dbxref=Genbank:YP_857682.1,GeneID:4489347;Name=YP_857682.1;Note=identified by match to protein family HMM PF04351;gbkey=CDS;product=type IV pilus biogenesis protein PilP;protein_id=YP_857682.1;transl_table=11
NC_008570.1	RefSeq	gene	3604472	3605071	.	-	.	ID=gene3188;Dbxref=GeneID:4489873;Name=pilO;gbkey=Gene;gene=pilO;gene_biotype=protein_coding;locus_tag=AHA_3192
NC_008570.1	RefSeq	CDS	3604472	3605071	.	-	0	ID=cds3097;Parent=gene3188;Dbxref=Genbank:YP_857683.1,GeneID:4489873;Name=YP_857683.1;Note=identified by match to protein family HMM PF04350;gbkey=CDS;gene=pilO;product=type IV pilus biogenesis protein PilO;protein_id=YP_857683.1;transl_table=11
NC_008570.1	RefSeq	gene	3605068	3605646	.	-	.	ID=gene3189;Dbxref=GeneID:4489874;Name=pilN;gbkey=Gene;gene=pilN;gene_biotype=protein_coding;locus_tag=AHA_3193
NC_008570.1	RefSeq	CDS	3605068	3605646	.	-	0	ID=cds3098;Parent=gene3189;Dbxref=Genbank:YP_857684.1,GeneID:4489874;Name=YP_857684.1;Note=identified by match to protein family HMM PF05137;gbkey=CDS;gene=pilN;product=type IV pilus biogenesis PilN;protein_id=YP_857684.1;transl_table=11
NC_008570.1	RefSeq	gene	3605634	3606704	.	-	.	ID=gene3190;Dbxref=GeneID:4489875;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=AHA_3194
NC_008570.1	RefSeq	CDS	3605634	3606704	.	-	0	ID=cds3099;Parent=gene3190;Dbxref=Genbank:YP_857685.1,GeneID:4489875;Name=YP_857685.1;Note=identified by match to protein family HMM TIGR01175;gbkey=CDS;gene=pilM;product=type IV pilus assembly protein PilM;protein_id=YP_857685.1;transl_table=11
NC_008570.1	RefSeq	gene	3606991	3609480	.	+	.	ID=gene3191;Dbxref=GeneID:4489876;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AHA_3195
NC_008570.1	RefSeq	CDS	3606991	3609480	.	+	0	ID=cds3100;Parent=gene3191;Dbxref=Genbank:YP_857686.1,GeneID:4489876;Name=YP_857686.1;Note=identified by similarity to SP:P02918%3B match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=YP_857686.1;transl_table=11
NC_008570.1	RefSeq	gene	3609556	3610587	.	-	.	ID=gene3192;Dbxref=GeneID:4489877;Name=AHA_3196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3196
NC_008570.1	RefSeq	CDS	3609556	3610587	.	-	0	ID=cds3101;Parent=gene3192;Dbxref=Genbank:YP_857687.1,GeneID:4489877;Name=YP_857687.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=hydrogen peroxide-inducible genes activator;protein_id=YP_857687.1;transl_table=11
NC_008570.1	RefSeq	gene	3610608	3612248	.	-	.	ID=gene3193;Dbxref=GeneID:4489878;Name=AHA_3197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3197
NC_008570.1	RefSeq	CDS	3610608	3612248	.	-	0	ID=cds3102;Parent=gene3193;Dbxref=Genbank:YP_857688.1,GeneID:4489878;Name=YP_857688.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857688.1;transl_table=11
NC_008570.1	RefSeq	gene	3612471	3613106	.	-	.	ID=gene3194;Dbxref=GeneID:4489879;Name=AHA_3198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3198
NC_008570.1	RefSeq	CDS	3612471	3613106	.	-	0	ID=cds3103;Parent=gene3194;Dbxref=Genbank:YP_857689.1,GeneID:4489879;Name=YP_857689.1;gbkey=CDS;product=thioredoxin domain-containing protein;protein_id=YP_857689.1;transl_table=11
NC_008570.1	RefSeq	gene	3613187	3614047	.	-	.	ID=gene3195;Dbxref=GeneID:4489880;Name=AHA_3199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3199
NC_008570.1	RefSeq	CDS	3613187	3614047	.	-	0	ID=cds3104;Parent=gene3195;Dbxref=Genbank:YP_857690.1,GeneID:4489880;Name=YP_857690.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=Zn-dependent hydrolase;protein_id=YP_857690.1;transl_table=11
NC_008570.1	RefSeq	gene	3614174	3615073	.	+	.	ID=gene3196;Dbxref=GeneID:4489881;Name=AHA_3200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3200
NC_008570.1	RefSeq	CDS	3614174	3615073	.	+	0	ID=cds3105;Parent=gene3196;Dbxref=Genbank:YP_857691.1,GeneID:4489881;Name=YP_857691.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_857691.1;transl_table=11
NC_008570.1	RefSeq	gene	3615156	3615932	.	-	.	ID=gene3197;Dbxref=GeneID:4489882;Name=AHA_3201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3201
NC_008570.1	RefSeq	CDS	3615156	3615932	.	-	0	ID=cds3106;Parent=gene3197;Dbxref=Genbank:YP_857692.1,GeneID:4489882;Name=YP_857692.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857692.1;transl_table=11
NC_008570.1	RefSeq	gene	3616109	3616966	.	+	.	ID=gene3198;Dbxref=GeneID:4489883;Name=AHA_3202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3202
NC_008570.1	RefSeq	CDS	3616109	3616966	.	+	0	ID=cds3107;Parent=gene3198;Dbxref=Genbank:YP_857693.1,GeneID:4489883;Name=YP_857693.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857693.1;transl_table=11
NC_008570.1	RefSeq	gene	3617115	3617834	.	+	.	ID=gene3199;Dbxref=GeneID:4489884;Name=AHA_3203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3203
NC_008570.1	RefSeq	CDS	3617115	3617834	.	+	0	ID=cds3108;Parent=gene3199;Dbxref=Genbank:YP_857694.1,GeneID:4489884;Name=YP_857694.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=M24/M37 family peptidase;protein_id=YP_857694.1;transl_table=11
NC_008570.1	RefSeq	gene	3617912	3619327	.	-	.	ID=gene3200;Dbxref=GeneID:4489885;Name=AHA_3204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3204
NC_008570.1	RefSeq	CDS	3617912	3619327	.	-	0	ID=cds3109;Parent=gene3200;Dbxref=Genbank:YP_857695.1,GeneID:4489885;Name=YP_857695.1;Note=identified by match to protein family HMM PF01554;gbkey=CDS;product=mate efflux family protein;protein_id=YP_857695.1;transl_table=11
NC_008570.1	RefSeq	gene	3619402	3622680	.	+	.	ID=gene3201;Dbxref=GeneID:4489886;Name=AHA_3205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3205
NC_008570.1	RefSeq	CDS	3619402	3622680	.	+	0	ID=cds3110;Parent=gene3201;Dbxref=Genbank:YP_857696.1,GeneID:4489886;Name=YP_857696.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;product=small conductance mechanosensitive Ion channel (MscS) family protein;protein_id=YP_857696.1;transl_table=11
NC_008570.1	RefSeq	gene	3622703	3623422	.	+	.	ID=gene3202;Dbxref=GeneID:4489887;Name=AHA_3206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3206
NC_008570.1	RefSeq	CDS	3622703	3623422	.	+	0	ID=cds3111;Parent=gene3202;Dbxref=Genbank:YP_857697.1,GeneID:4489887;Name=YP_857697.1;Note=identified by match to protein family HMM PF03009;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=YP_857697.1;transl_table=11
NC_008570.1	RefSeq	gene	3623548	3625425	.	+	.	ID=gene3203;Dbxref=GeneID:4489888;Name=AHA_3207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3207
NC_008570.1	RefSeq	CDS	3623548	3625425	.	+	0	ID=cds3112;Parent=gene3203;Dbxref=Genbank:YP_857698.1,GeneID:4489888;Name=YP_857698.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857698.1;transl_table=11
NC_008570.1	RefSeq	gene	3625943	3627727	.	+	.	ID=gene3204;Dbxref=GeneID:4489889;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AHA_3208
NC_008570.1	RefSeq	CDS	3625943	3627727	.	+	0	ID=cds3113;Parent=gene3204;Dbxref=Genbank:YP_857699.1,GeneID:4489889;Name=YP_857699.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;gene=frdA;product=fumarate reductase flavoprotein subunit;protein_id=YP_857699.1;transl_table=11
NC_008570.1	RefSeq	gene	3627720	3628454	.	+	.	ID=gene3205;Dbxref=GeneID:4489890;Name=AHA_3209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3209
NC_008570.1	RefSeq	CDS	3627720	3628454	.	+	0	ID=cds3114;Parent=gene3205;Dbxref=Genbank:YP_857700.1,GeneID:4489890;Name=YP_857700.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=YP_857700.1;transl_table=11
NC_008570.1	RefSeq	gene	3628471	3628869	.	+	.	ID=gene3206;Dbxref=GeneID:4489891;Name=AHA_3210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3210
NC_008570.1	RefSeq	CDS	3628471	3628869	.	+	0	ID=cds3115;Parent=gene3206;Dbxref=Genbank:YP_857701.1,GeneID:4489891;Name=YP_857701.1;Note=identified by match to protein family HMM PF02300;gbkey=CDS;product=fumarate reductase subunit C;protein_id=YP_857701.1;transl_table=11
NC_008570.1	RefSeq	gene	3628982	3629338	.	+	.	ID=gene3207;Dbxref=GeneID:4490571;Name=AHA_3211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3211
NC_008570.1	RefSeq	CDS	3628982	3629338	.	+	0	ID=cds3116;Parent=gene3207;Dbxref=Genbank:YP_857702.1,GeneID:4490571;Name=YP_857702.1;Note=identified by match to protein family HMM PF02313;gbkey=CDS;product=fumarate reductase subunit D;protein_id=YP_857702.1;transl_table=11
NC_008570.1	RefSeq	gene	3629484	3630182	.	-	.	ID=gene3208;Dbxref=GeneID:4490572;Name=AHA_3212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3212
NC_008570.1	RefSeq	CDS	3629484	3630182	.	-	0	ID=cds3117;Parent=gene3208;Dbxref=Genbank:YP_857703.1,GeneID:4490572;Name=YP_857703.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857703.1;transl_table=11
NC_008570.1	RefSeq	gene	3630276	3630917	.	+	.	ID=gene3209;Dbxref=GeneID:4490573;Name=AHA_3213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3213
NC_008570.1	RefSeq	CDS	3630276	3630917	.	+	0	ID=cds3118;Parent=gene3209;Dbxref=Genbank:YP_857704.1,GeneID:4490573;Name=YP_857704.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_857704.1;transl_table=11
NC_008570.1	RefSeq	gene	3631058	3631834	.	-	.	ID=gene3210;Dbxref=GeneID:4490574;Name=AHA_3214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3214
NC_008570.1	RefSeq	CDS	3631058	3631834	.	-	0	ID=cds3119;Parent=gene3210;Dbxref=Genbank:YP_857705.1,GeneID:4490574;Name=YP_857705.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857705.1;transl_table=11
NC_008570.1	RefSeq	gene	3631891	3633111	.	-	.	ID=gene3211;Dbxref=GeneID:4490575;Name=AHA_3215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3215
NC_008570.1	RefSeq	CDS	3631891	3633111	.	-	0	ID=cds3120;Parent=gene3211;Dbxref=Genbank:YP_857706.1,GeneID:4490575;Name=YP_857706.1;Note=identified by match to protein family HMM PF06224;gbkey=CDS;product=hypothetical protein;protein_id=YP_857706.1;transl_table=11
NC_008570.1	RefSeq	gene	3633245	3633883	.	-	.	ID=gene3212;Dbxref=GeneID:4490576;Name=AHA_3216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3216
NC_008570.1	RefSeq	CDS	3633245	3633883	.	-	0	ID=cds3121;Parent=gene3212;Dbxref=Genbank:YP_857707.1,GeneID:4490576;Name=YP_857707.1;gbkey=CDS;product=methyltransferase domain-containing protein;protein_id=YP_857707.1;transl_table=11
NC_008570.1	RefSeq	gene	3634101	3634745	.	+	.	ID=gene3213;Dbxref=GeneID:4490577;Name=AHA_3217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3217
NC_008570.1	RefSeq	CDS	3634101	3634745	.	+	0	ID=cds3122;Parent=gene3213;Dbxref=Genbank:YP_857708.1,GeneID:4490577;Name=YP_857708.1;gbkey=CDS;product=thermostable hemolysin;protein_id=YP_857708.1;transl_table=11
NC_008570.1	RefSeq	gene	3634742	3636208	.	+	.	ID=gene3214;Dbxref=GeneID:4490578;Name=AHA_3218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3218
NC_008570.1	RefSeq	CDS	3634742	3636208	.	+	0	ID=cds3123;Parent=gene3214;Dbxref=Genbank:YP_857709.1,GeneID:4490578;Name=YP_857709.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain acyl-CoA synthetase;protein_id=YP_857709.1;transl_table=11
NC_008570.1	RefSeq	gene	3636205	3636864	.	+	.	ID=gene3215;Dbxref=GeneID:4490579;Name=AHA_3219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3219
NC_008570.1	RefSeq	CDS	3636205	3636864	.	+	0	ID=cds3124;Parent=gene3215;Dbxref=Genbank:YP_857710.1,GeneID:4490579;Name=YP_857710.1;gbkey=CDS;product=long-chain acyl-CoA synthetase;protein_id=YP_857710.1;transl_table=11
NC_008570.1	RefSeq	gene	3636861	3637706	.	+	.	ID=gene3216;Dbxref=GeneID:4490580;Name=AHA_3220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3220
NC_008570.1	RefSeq	CDS	3636861	3637706	.	+	0	ID=cds3125;Parent=gene3216;Dbxref=Genbank:YP_857711.1,GeneID:4490580;Name=YP_857711.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF07993;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_857711.1;transl_table=11
NC_008570.1	RefSeq	gene	3637708	3638346	.	+	.	ID=gene3217;Dbxref=GeneID:4490581;Name=AHA_3221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3221
NC_008570.1	RefSeq	CDS	3637708	3638346	.	+	0	ID=cds3126;Parent=gene3217;Dbxref=Genbank:YP_857712.1,GeneID:4490581;Name=YP_857712.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857712.1;transl_table=11
NC_008570.1	RefSeq	gene	3638429	3639118	.	+	.	ID=gene3218;Dbxref=GeneID:4490582;Name=AHA_3222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3222
NC_008570.1	RefSeq	CDS	3638429	3639118	.	+	0	ID=cds3127;Parent=gene3218;Dbxref=Genbank:YP_857713.1,GeneID:4490582;Name=YP_857713.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=DNA-binding response regulator;protein_id=YP_857713.1;transl_table=11
NC_008570.1	RefSeq	gene	3639115	3640554	.	+	.	ID=gene3219;Dbxref=GeneID:4490583;Name=AHA_3223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3223
NC_008570.1	RefSeq	CDS	3639115	3640554	.	+	0	ID=cds3128;Parent=gene3219;Dbxref=Genbank:YP_857714.1,GeneID:4490583;Name=YP_857714.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_857714.1;transl_table=11
NC_008570.1	RefSeq	gene	3640610	3641116	.	-	.	ID=gene3220;Dbxref=GeneID:4490584;Name=AHA_3224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3224
NC_008570.1	RefSeq	CDS	3640610	3641116	.	-	0	ID=cds3129;Parent=gene3220;Dbxref=Genbank:YP_857715.1,GeneID:4490584;Name=YP_857715.1;Note=identified by match to protein family HMM PF05618;gbkey=CDS;product=ATP-dependent Zn proteases;protein_id=YP_857715.1;transl_table=11
NC_008570.1	RefSeq	gene	3641522	3642565	.	+	.	ID=gene3221;Dbxref=GeneID:4490585;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AHA_3225
NC_008570.1	RefSeq	CDS	3641522	3642565	.	+	0	ID=cds3130;Parent=gene3221;Dbxref=Genbank:YP_857716.1,GeneID:4490585;Name=YP_857716.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;gene=guaC;product=guanosine 5'-monophosphate oxidoreductase;protein_id=YP_857716.1;transl_table=11
NC_008570.1	RefSeq	gene	3642660	3643868	.	+	.	ID=gene3222;Dbxref=GeneID:4490586;Name=AHA_3226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3226
NC_008570.1	RefSeq	CDS	3642660	3643868	.	+	0	ID=cds3131;Parent=gene3222;Dbxref=Genbank:YP_857717.1,GeneID:4490586;Name=YP_857717.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857717.1;transl_table=11
NC_008570.1	RefSeq	gene	3643912	3644478	.	+	.	ID=gene3223;Dbxref=GeneID:4490587;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AHA_3227
NC_008570.1	RefSeq	CDS	3643912	3644478	.	+	0	ID=cds3132;Parent=gene3223;Dbxref=Genbank:YP_857718.1,GeneID:4490587;Name=YP_857718.1;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=YP_857718.1;transl_table=11
NC_008570.1	RefSeq	gene	3644620	3645246	.	+	.	ID=gene3224;Dbxref=GeneID:4490588;Name=AHA_3228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3228
NC_008570.1	RefSeq	CDS	3644620	3645246	.	+	0	ID=cds3133;Parent=gene3224;Dbxref=Genbank:YP_857719.1,GeneID:4490588;Name=YP_857719.1;gbkey=CDS;product=inner membrane protein YjdF;protein_id=YP_857719.1;transl_table=11
NC_008570.1	RefSeq	gene	3645314	3646066	.	+	.	ID=gene3225;Dbxref=GeneID:4490589;Name=AHA_3229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3229
NC_008570.1	RefSeq	CDS	3645314	3646066	.	+	0	ID=cds3134;Parent=gene3225;Dbxref=Genbank:YP_857720.1,GeneID:4490589;Name=YP_857720.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857720.1;transl_table=11
NC_008570.1	RefSeq	gene	3646184	3647140	.	+	.	ID=gene3226;Dbxref=GeneID:4490590;Name=AHA_3230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3230
NC_008570.1	RefSeq	CDS	3646184	3647140	.	+	0	ID=cds3135;Parent=gene3226;Dbxref=Genbank:YP_857721.1,GeneID:4490590;Name=YP_857721.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;product=glycerate dehydrogenase;protein_id=YP_857721.1;transl_table=11
NC_008570.1	RefSeq	gene	3647202	3647672	.	-	.	ID=gene3227;Dbxref=GeneID:4488081;Name=AHA_3231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3231
NC_008570.1	RefSeq	CDS	3647202	3647672	.	-	0	ID=cds3136;Parent=gene3227;Dbxref=Genbank:YP_857722.1,GeneID:4488081;Name=YP_857722.1;Note=identified by match to protein family HMM PF05433;gbkey=CDS;product=surface antigen family protein;protein_id=YP_857722.1;transl_table=11
NC_008570.1	RefSeq	gene	3647882	3649435	.	-	.	ID=gene3228;Dbxref=GeneID:4488082;Name=AHA_3232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3232
NC_008570.1	RefSeq	CDS	3647882	3649435	.	-	0	ID=cds3137;Parent=gene3228;Dbxref=Genbank:YP_857723.1,GeneID:4488082;Name=YP_857723.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857723.1;transl_table=11
NC_008570.1	RefSeq	gene	3649724	3650326	.	+	.	ID=gene3229;Dbxref=GeneID:4488083;Name=AHA_3233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3233
NC_008570.1	RefSeq	CDS	3649724	3650326	.	+	0	ID=cds3138;Parent=gene3229;Dbxref=Genbank:YP_857724.1,GeneID:4488083;Name=YP_857724.1;gbkey=CDS;product=nitroreductase family protein;protein_id=YP_857724.1;transl_table=11
NC_008570.1	RefSeq	gene	3650375	3651025	.	-	.	ID=gene3230;Dbxref=GeneID:4490688;Name=AHA_3234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3234
NC_008570.1	RefSeq	CDS	3650375	3651025	.	-	0	ID=cds3139;Parent=gene3230;Dbxref=Genbank:YP_857725.1,GeneID:4490688;Name=YP_857725.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;product=phosphatase YfbT;protein_id=YP_857725.1;transl_table=11
NC_008570.1	RefSeq	gene	3651022	3651267	.	-	.	ID=gene3231;Dbxref=GeneID:4490689;Name=AHA_3235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3235
NC_008570.1	RefSeq	CDS	3651022	3651267	.	-	0	ID=cds3140;Parent=gene3231;Dbxref=Genbank:YP_857726.1,GeneID:4490689;Name=YP_857726.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857726.1;transl_table=11
NC_008570.1	RefSeq	gene	3651385	3652293	.	+	.	ID=gene3232;Dbxref=GeneID:4490690;Name=AHA_3236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3236
NC_008570.1	RefSeq	CDS	3651385	3652293	.	+	0	ID=cds3141;Parent=gene3232;Dbxref=Genbank:YP_857727.1,GeneID:4490690;Name=YP_857727.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=isoleucine biosynthesis transcriptional activator;protein_id=YP_857727.1;transl_table=11
NC_008570.1	RefSeq	gene	3652365	3653321	.	-	.	ID=gene3233;Dbxref=GeneID:4490691;Name=AHA_3237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3237
NC_008570.1	RefSeq	CDS	3652365	3653321	.	-	0	ID=cds3142;Parent=gene3233;Dbxref=Genbank:YP_857728.1,GeneID:4490691;Name=YP_857728.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857728.1;transl_table=11
NC_008570.1	RefSeq	gene	3653483	3654127	.	-	.	ID=gene3234;Dbxref=GeneID:4490692;Name=AHA_3238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3238
NC_008570.1	RefSeq	CDS	3653483	3654127	.	-	0	ID=cds3143;Parent=gene3234;Dbxref=Genbank:YP_857729.1,GeneID:4490692;Name=YP_857729.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;product=cold-shock protein%2C DNA-binding;protein_id=YP_857729.1;transl_table=11
NC_008570.1	RefSeq	gene	3654244	3654810	.	-	.	ID=gene3235;Dbxref=GeneID:4490693;Name=AHA_3239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3239
NC_008570.1	RefSeq	CDS	3654244	3654810	.	-	0	ID=cds3144;Parent=gene3235;Dbxref=Genbank:YP_857730.1,GeneID:4490693;Name=YP_857730.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=YP_857730.1;transl_table=11
NC_008570.1	RefSeq	gene	3654844	3656007	.	-	.	ID=gene3236;Dbxref=GeneID:4490694;Name=AHA_3240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3240
NC_008570.1	RefSeq	CDS	3654844	3656007	.	-	0	ID=cds3145;Parent=gene3236;Dbxref=Genbank:YP_857731.1,GeneID:4490694;Name=YP_857731.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494%3B match to protein family HMM TIGR01988;gbkey=CDS;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=YP_857731.1;transl_table=11
NC_008570.1	RefSeq	gene	3656275	3657708	.	+	.	ID=gene3237;Dbxref=GeneID:4490695;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AHA_3241
NC_008570.1	RefSeq	CDS	3656275	3657708	.	+	0	ID=cds3146;Parent=gene3237;Dbxref=Genbank:YP_857732.1,GeneID:4490695;Name=YP_857732.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;gene=miaB;product=(dimethylallyl)adenosine tRNA methylthiotransferase;protein_id=YP_857732.1;transl_table=11
NC_008570.1	RefSeq	gene	3657764	3658807	.	+	.	ID=gene3238;Dbxref=GeneID:4490696;Name=AHA_3242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3242
NC_008570.1	RefSeq	CDS	3657764	3658807	.	+	0	ID=cds3147;Parent=gene3238;Dbxref=Genbank:YP_857733.1,GeneID:4490696;Name=YP_857733.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF02562;gbkey=CDS;product=PhoH family protein;protein_id=YP_857733.1;transl_table=11
NC_008570.1	RefSeq	gene	3658804	3659268	.	+	.	ID=gene3239;Dbxref=GeneID:4490697;Name=AHA_3243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3243
NC_008570.1	RefSeq	CDS	3658804	3659268	.	+	0	ID=cds3148;Parent=gene3239;Dbxref=Genbank:YP_857734.1,GeneID:4490697;Name=YP_857734.1;Note=identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;product=hypothetical protein;protein_id=YP_857734.1;transl_table=11
NC_008570.1	RefSeq	gene	3659364	3660248	.	+	.	ID=gene3240;Dbxref=GeneID:4490698;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AHA_3244
NC_008570.1	RefSeq	CDS	3659364	3660248	.	+	0	ID=cds3149;Parent=gene3240;Dbxref=Genbank:YP_857735.1,GeneID:4490698;Name=YP_857735.1;Note=identified by similarity to SP:P0A2L3%3B match to protein family HMM PF00571%3B match to protein family HMM PF03471;gbkey=CDS;gene=corC;product=magnesium and cobalt efflux protein CorC;protein_id=YP_857735.1;transl_table=11
NC_008570.1	RefSeq	gene	3660468	3662012	.	+	.	ID=gene3241;Dbxref=GeneID:4490699;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AHA_3245
NC_008570.1	RefSeq	CDS	3660468	3662012	.	+	0	ID=cds3150;Parent=gene3241;Dbxref=Genbank:YP_857736.1,GeneID:4490699;Name=YP_857736.1;Note=identified by similarity to SP:P23930%3B match to protein family HMM PF00795%3B match to protein family HMM TIGR00546;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=YP_857736.1;transl_table=11
NC_008570.1	RefSeq	gene	3662228	3662716	.	-	.	ID=gene3242;Dbxref=GeneID:4490700;Name=AHA_3246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3246
NC_008570.1	RefSeq	CDS	3662228	3662716	.	-	0	ID=cds3151;Parent=gene3242;Dbxref=Genbank:YP_857737.1,GeneID:4490700;Name=YP_857737.1;Note=identified by similarity to GB:AAF94119.1%3B match to protein family HMM PF07295;gbkey=CDS;product=hypothetical protein;protein_id=YP_857737.1;transl_table=11
NC_008570.1	RefSeq	gene	3662709	3665441	.	+	.	ID=gene3243;Dbxref=GeneID:4490701;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AHA_3247
NC_008570.1	RefSeq	CDS	3662709	3665441	.	+	0	ID=cds3152;Parent=gene3243;Dbxref=Genbank:YP_857738.1,GeneID:4490701;Name=YP_857738.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=YP_857738.1;transl_table=11
NC_008570.1	RefSeq	gene	3665541	3666041	.	+	.	ID=gene3244;Dbxref=GeneID:4490702;Name=rlpB;gbkey=Gene;gene=rlpB;gene_biotype=protein_coding;locus_tag=AHA_3248
NC_008570.1	RefSeq	CDS	3665541	3666041	.	+	0	ID=cds3153;Parent=gene3244;Dbxref=Genbank:YP_857739.1,GeneID:4490702;Name=YP_857739.1;Note=identified by match to protein family HMM PF04390;gbkey=CDS;gene=rlpB;product=rare lipoprotein B;protein_id=YP_857739.1;transl_table=11
NC_008570.1	RefSeq	gene	3666066	3666212	.	+	.	ID=gene3245;Dbxref=GeneID:4490703;Name=AHA_3249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3249
NC_008570.1	RefSeq	CDS	3666066	3666212	.	+	0	ID=cds3154;Parent=gene3245;Dbxref=Genbank:YP_857740.1,GeneID:4490703;Name=YP_857740.1;gbkey=CDS;product=DNA polymerase III subunit delta;protein_id=YP_857740.1;transl_table=11
NC_008570.1	RefSeq	gene	3666212	3667243	.	+	.	ID=gene3246;Dbxref=GeneID:4490704;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AHA_3250
NC_008570.1	RefSeq	CDS	3666212	3667243	.	+	0	ID=cds3155;Parent=gene3246;Dbxref=Genbank:YP_857741.1,GeneID:4490704;Name=YP_857741.1;Note=identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=YP_857741.1;transl_table=11
NC_008570.1	RefSeq	gene	3667284	3667928	.	+	.	ID=gene3247;Dbxref=GeneID:4490705;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AHA_3251
NC_008570.1	RefSeq	CDS	3667284	3667928	.	+	0	ID=cds3156;Parent=gene3247;Dbxref=Genbank:YP_857742.1,GeneID:4490705;Name=YP_857742.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482;gbkey=CDS;gene=nadD;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=YP_857742.1;transl_table=11
NC_008570.1	RefSeq	gene	3668114	3668455	.	+	.	ID=gene3248;Dbxref=GeneID:4490706;Name=AHA_3252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3252
NC_008570.1	RefSeq	CDS	3668114	3668455	.	+	0	ID=cds3157;Parent=gene3248;Dbxref=Genbank:YP_857743.1,GeneID:4490706;Name=YP_857743.1;Note=identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;product=iojap superfamily protein;protein_id=YP_857743.1;transl_table=11
NC_008570.1	RefSeq	gene	3668478	3668945	.	+	.	ID=gene3249;Dbxref=GeneID:4488831;Name=AHA_3253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3253
NC_008570.1	RefSeq	CDS	3668478	3668945	.	+	0	ID=cds3158;Parent=gene3249;Dbxref=Genbank:YP_857744.1,GeneID:4488831;Name=YP_857744.1;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;gbkey=CDS;product=rRNA large subunit methyltransferase;protein_id=YP_857744.1;transl_table=11
NC_008570.1	RefSeq	gene	3669051	3670967	.	+	.	ID=gene3250;Dbxref=GeneID:4488832;Name=AHA_3254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3254
NC_008570.1	RefSeq	CDS	3669051	3670967	.	+	0	ID=cds3159;Parent=gene3250;Dbxref=Genbank:YP_857745.1,GeneID:4488832;Name=YP_857745.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717;gbkey=CDS;product=penicillin-binding protein 2;protein_id=YP_857745.1;transl_table=11
NC_008570.1	RefSeq	gene	3670882	3672063	.	+	.	ID=gene3251;Dbxref=GeneID:4488833;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=AHA_3255
NC_008570.1	RefSeq	CDS	3670882	3672063	.	+	0	ID=cds3160;Parent=gene3251;Dbxref=Genbank:YP_857746.1,GeneID:4488833;Name=YP_857746.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210;gbkey=CDS;gene=mrdB;product=rod shape-determining protein RodA;protein_id=YP_857746.1;transl_table=11
NC_008570.1	RefSeq	gene	3672060	3672197	.	+	.	ID=gene3252;Dbxref=GeneID:4488834;Name=AHA_3256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3256
NC_008570.1	RefSeq	CDS	3672060	3672197	.	+	0	ID=cds3161;Parent=gene3252;Dbxref=Genbank:YP_857747.1,GeneID:4488834;Name=YP_857747.1;gbkey=CDS;product=rod shape-determining protein RodA;protein_id=YP_857747.1;transl_table=11
NC_008570.1	RefSeq	gene	3672293	3673195	.	+	.	ID=gene3253;Dbxref=GeneID:4488835;Name=mltB-2;gbkey=Gene;gene=mltB-2;gene_biotype=protein_coding;locus_tag=AHA_3257
NC_008570.1	RefSeq	CDS	3672293	3673195	.	+	0	ID=cds3162;Parent=gene3253;Dbxref=Genbank:YP_857748.1,GeneID:4488835;Name=YP_857748.1;Note=identified by match to protein family HMM TIGR02282;gbkey=CDS;gene=mltB-2;product=lytic murein transglycosylase B;protein_id=YP_857748.1;transl_table=11
NC_008570.1	RefSeq	gene	3673137	3674102	.	+	.	ID=gene3254;Dbxref=GeneID:4488836;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AHA_3258
NC_008570.1	RefSeq	CDS	3673137	3674102	.	+	0	ID=cds3163;Parent=gene3254;Dbxref=Genbank:YP_857749.1,GeneID:4488836;Name=YP_857749.1;Note=identified by match to protein family HMM PF03330%3B match to protein family HMM PF05036%3B match to protein family HMM TIGR00413;gbkey=CDS;gene=rlpA;product=rare lipoprotein A;protein_id=YP_857749.1;transl_table=11
NC_008570.1	RefSeq	gene	3674297	3675487	.	+	.	ID=gene3255;Dbxref=GeneID:4488837;Name=AHA_3259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3259
NC_008570.1	RefSeq	CDS	3674297	3675487	.	+	0	ID=cds3164;Parent=gene3255;Dbxref=Genbank:YP_857750.1,GeneID:4488837;Name=YP_857750.1;Note=identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943;gbkey=CDS;product=penicillin-binding protein;protein_id=YP_857750.1;transl_table=11
NC_008570.1	RefSeq	gene	3675780	3676043	.	+	.	ID=gene3256;Dbxref=GeneID:4488838;Name=AHA_3260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3260
NC_008570.1	RefSeq	CDS	3675780	3676043	.	+	0	ID=cds3165;Parent=gene3256;Dbxref=Genbank:YP_857751.1,GeneID:4488838;Name=YP_857751.1;Note=identified by match to protein family HMM PF04359;gbkey=CDS;product=hypothetical protein;protein_id=YP_857751.1;transl_table=11
NC_008570.1	RefSeq	gene	3676140	3676844	.	+	.	ID=gene3257;Dbxref=GeneID:4488839;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AHA_3261
NC_008570.1	RefSeq	CDS	3676140	3676844	.	+	0	ID=cds3166;Parent=gene3257;Dbxref=Genbank:YP_857752.1,GeneID:4488839;Name=YP_857752.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;gene=lipB;product=lipoate-protein ligase B;protein_id=YP_857752.1;transl_table=11
NC_008570.1	RefSeq	gene	3676841	3676933	.	+	.	ID=gene3258;Dbxref=GeneID:4488840;Name=AHA_3262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3262
NC_008570.1	RefSeq	CDS	3676841	3676933	.	+	0	ID=cds3167;Parent=gene3258;Dbxref=Genbank:YP_857753.1,GeneID:4488840;Name=YP_857753.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857753.1;transl_table=11
NC_008570.1	RefSeq	gene	3676930	3677895	.	+	.	ID=gene3259;Dbxref=GeneID:4488841;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AHA_3263
NC_008570.1	RefSeq	CDS	3676930	3677895	.	+	0	ID=cds3168;Parent=gene3259;Dbxref=Genbank:YP_857754.1,GeneID:4488841;Name=YP_857754.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;gene=lipA;product=lipoyl synthase;protein_id=YP_857754.1;transl_table=11
NC_008570.1	RefSeq	gene	3678047	3678556	.	+	.	ID=gene3260;Dbxref=GeneID:4488842;Name=AHA_3264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3264
NC_008570.1	RefSeq	CDS	3678047	3678556	.	+	0	ID=cds3169;Parent=gene3260;Dbxref=Genbank:YP_857755.1,GeneID:4488842;Name=YP_857755.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_857755.1;transl_table=11
NC_008570.1	RefSeq	gene	3678695	3679264	.	+	.	ID=gene3261;Dbxref=GeneID:4488843;Name=AHA_3265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3265
NC_008570.1	RefSeq	CDS	3678695	3679264	.	+	0	ID=cds3170;Parent=gene3261;Dbxref=Genbank:YP_857756.1,GeneID:4488843;Name=YP_857756.1;Note=identified by match to protein family HMM PF06821;gbkey=CDS;product=hypothetical protein;protein_id=YP_857756.1;transl_table=11
NC_008570.1	RefSeq	gene	3679309	3679908	.	-	.	ID=gene3262;Dbxref=GeneID:4488844;Name=nqrE-2;gbkey=Gene;gene=nqrE-2;gene_biotype=protein_coding;locus_tag=AHA_3266
NC_008570.1	RefSeq	CDS	3679309	3679908	.	-	0	ID=cds3171;Parent=gene3262;Dbxref=Genbank:YP_857757.1,GeneID:4488844;Name=YP_857757.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;gene=nqrE-2;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=YP_857757.1;transl_table=11
NC_008570.1	RefSeq	gene	3680063	3680590	.	-	.	ID=gene3263;Dbxref=GeneID:4488845;Name=AHA_3267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3267
NC_008570.1	RefSeq	CDS	3680063	3680590	.	-	0	ID=cds3172;Parent=gene3263;Dbxref=Genbank:YP_857758.1,GeneID:4488845;Name=YP_857758.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857758.1;transl_table=11
NC_008570.1	RefSeq	gene	3680692	3681195	.	-	.	ID=gene3264;Dbxref=GeneID:4488846;Name=AHA_3268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3268
NC_008570.1	RefSeq	CDS	3680692	3681195	.	-	0	ID=cds3173;Parent=gene3264;Dbxref=Genbank:YP_857759.1,GeneID:4488846;Name=YP_857759.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_857759.1;transl_table=11
NC_008570.1	RefSeq	gene	3681235	3682626	.	-	.	ID=gene3265;Dbxref=GeneID:4488847;Name=AHA_3269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3269
NC_008570.1	RefSeq	CDS	3681235	3682626	.	-	0	ID=cds3174;Parent=gene3265;Dbxref=Genbank:YP_857760.1,GeneID:4488847;Name=YP_857760.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=methyltransferase;protein_id=YP_857760.1;transl_table=11
NC_008570.1	RefSeq	gene	3682566	3684296	.	-	.	ID=gene3266;Dbxref=GeneID:4488848;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AHA_3270
NC_008570.1	RefSeq	CDS	3682566	3684296	.	-	0	ID=cds3175;Parent=gene3266;Dbxref=Genbank:YP_857761.1,GeneID:4488848;Name=YP_857761.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644;gbkey=CDS;gene=recJ;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=YP_857761.1;transl_table=11
NC_008570.1	RefSeq	gene	3684262	3684978	.	-	.	ID=gene3267;Dbxref=GeneID:4488849;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AHA_3271
NC_008570.1	RefSeq	CDS	3684262	3684978	.	-	0	ID=cds3176;Parent=gene3267;Dbxref=Genbank:YP_857762.1,GeneID:4488849;Name=YP_857762.1;Note=identified by similarity to SP:P21892;gbkey=CDS;gene=dsbC;product=thiol:disulfide interchange protein DsbC;protein_id=YP_857762.1;transl_table=11
NC_008570.1	RefSeq	gene	3685239	3685646	.	+	.	ID=gene3268;Dbxref=GeneID:4488850;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AHA_3272
NC_008570.1	RefSeq	CDS	3685239	3685646	.	+	0	ID=cds3177;Parent=gene3268;Dbxref=Genbank:YP_857763.1,GeneID:4488850;Name=YP_857763.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=YP_857763.1;transl_table=11
NC_008570.1	RefSeq	gene	3685975	3687381	.	+	.	ID=gene3269;Dbxref=GeneID:4487401;Name=AHA_3274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3274
NC_008570.1	RefSeq	CDS	3685975	3687381	.	+	0	ID=cds3178;Parent=gene3269;Dbxref=Genbank:YP_857764.1,GeneID:4487401;Name=YP_857764.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM PF02743%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_857764.1;transl_table=11
NC_008570.1	RefSeq	gene	3687378	3688277	.	-	.	ID=gene3270;Dbxref=GeneID:4487402;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AHA_3273
NC_008570.1	RefSeq	CDS	3687378	3688277	.	-	0	ID=cds3179;Parent=gene3270;Dbxref=Genbank:YP_857765.1,GeneID:4487402;Name=YP_857765.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=YP_857765.1;transl_table=11
NC_008570.1	RefSeq	gene	3688465	3688983	.	+	.	ID=gene3271;Dbxref=GeneID:4487403;Name=AHA_3275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3275
NC_008570.1	RefSeq	CDS	3688465	3688983	.	+	0	ID=cds3180;Parent=gene3271;Dbxref=Genbank:YP_857766.1,GeneID:4487403;Name=YP_857766.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin FldB;protein_id=YP_857766.1;transl_table=11
NC_008570.1	RefSeq	gene	3689296	3690696	.	+	.	ID=gene3272;Dbxref=GeneID:4487404;Name=AHA_3276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3276
NC_008570.1	RefSeq	CDS	3689296	3690696	.	+	0	ID=cds3181;Parent=gene3272;Dbxref=Genbank:YP_857767.1,GeneID:4487404;Name=YP_857767.1;Note=identified by match to protein family HMM PF01523;gbkey=CDS;product=TldD protein;protein_id=YP_857767.1;transl_table=11
NC_008570.1	RefSeq	gene	3690696	3692036	.	+	.	ID=gene3273;Dbxref=GeneID:4487405;Name=AHA_3277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3277
NC_008570.1	RefSeq	CDS	3690696	3692036	.	+	0	ID=cds3182;Parent=gene3273;Dbxref=Genbank:YP_857768.1,GeneID:4487405;Name=YP_857768.1;Note=identified by match to protein family HMM PF01523;gbkey=CDS;product=PmbA-like protein;protein_id=YP_857768.1;transl_table=11
NC_008570.1	RefSeq	gene	3692230	3692604	.	+	.	ID=gene3274;Dbxref=GeneID:4487406;Name=AHA_3278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3278
NC_008570.1	RefSeq	CDS	3692230	3692604	.	+	0	ID=cds3183;Parent=gene3274;Dbxref=Genbank:YP_857769.1,GeneID:4487406;Name=YP_857769.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_857769.1;transl_table=11
NC_008570.1	RefSeq	gene	3692680	3693606	.	-	.	ID=gene3275;Dbxref=GeneID:4487407;Name=AHA_3279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3279
NC_008570.1	RefSeq	CDS	3692680	3693606	.	-	0	ID=cds3184;Parent=gene3275;Dbxref=Genbank:YP_857770.1,GeneID:4487407;Name=YP_857770.1;Note=identified by match to protein family HMM PF03734;gbkey=CDS;product=LysM domain-containing protein;protein_id=YP_857770.1;transl_table=11
NC_008570.1	RefSeq	gene	3693885	3695168	.	-	.	ID=gene3276;Dbxref=GeneID:4487408;Name=AHA_3280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3280
NC_008570.1	RefSeq	CDS	3693885	3695168	.	-	0	ID=cds3185;Parent=gene3276;Dbxref=Genbank:YP_857771.1,GeneID:4487408;Name=YP_857771.1;Note=identified by match to protein family HMM PF00201%3B match to protein family HMM TIGR01426;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_857771.1;transl_table=11
NC_008570.1	RefSeq	gene	3695168	3696043	.	-	.	ID=gene3277;Dbxref=GeneID:4487409;Name=AHA_3281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3281
NC_008570.1	RefSeq	CDS	3695168	3696043	.	-	0	ID=cds3186;Parent=gene3277;Dbxref=Genbank:YP_857772.1,GeneID:4487409;Name=YP_857772.1;Note=identified by similarity to GB:AAC21672.1%3B match to protein family HMM PF02668;gbkey=CDS;product=pyoverdine chromophore biosynthetic protein PvcB;protein_id=YP_857772.1;transl_table=11
NC_008570.1	RefSeq	gene	3696054	3697028	.	-	.	ID=gene3278;Dbxref=GeneID:4487410;Name=AHA_3282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3282
NC_008570.1	RefSeq	CDS	3696054	3697028	.	-	0	ID=cds3187;Parent=gene3278;Dbxref=Genbank:YP_857773.1,GeneID:4487410;Name=YP_857773.1;Note=identified by similarity to GB:AAC21671.1%3B match to protein family HMM PF05141;gbkey=CDS;product=pyoverdine chromophore biosynthetic protein PvcA;protein_id=YP_857773.1;transl_table=11
NC_008570.1	RefSeq	gene	3697584	3698420	.	-	.	ID=gene3279;Dbxref=GeneID:4487411;Name=AHA_3283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3283
NC_008570.1	RefSeq	CDS	3697584	3698420	.	-	0	ID=cds3188;Parent=gene3279;Dbxref=Genbank:YP_857774.1,GeneID:4487411;Name=YP_857774.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_857774.1;transl_table=11
NC_008570.1	RefSeq	gene	3698541	3699923	.	+	.	ID=gene3280;Dbxref=GeneID:4487412;Name=AHA_3284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3284
NC_008570.1	RefSeq	CDS	3698541	3699923	.	+	0	ID=cds3189;Parent=gene3280;Dbxref=Genbank:YP_857775.1,GeneID:4487412;Name=YP_857775.1;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=YP_857775.1;transl_table=11
NC_008570.1	RefSeq	gene	3699980	3703087	.	-	.	ID=gene3281;Dbxref=GeneID:4487413;Name=AHA_3285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3285
NC_008570.1	RefSeq	CDS	3699980	3703087	.	-	0	ID=cds3190;Parent=gene3281;Dbxref=Genbank:YP_857776.1,GeneID:4487413;Name=YP_857776.1;Note=identified by match to protein family HMM PF01568;gbkey=CDS;product=protein Tprotein TrA;protein_id=YP_857776.1;transl_table=11
NC_008570.1	RefSeq	gene	3703087	3704193	.	-	.	ID=gene3282;Dbxref=GeneID:4487414;Name=AHA_3286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3286
NC_008570.1	RefSeq	CDS	3703087	3704193	.	-	0	ID=cds3191;Parent=gene3282;Dbxref=Genbank:YP_857777.1,GeneID:4487414;Name=YP_857777.1;Note=identified by match to protein family HMM PF03916;gbkey=CDS;product=tetrathionate reductase subunit C;protein_id=YP_857777.1;transl_table=11
NC_008570.1	RefSeq	gene	3704183	3704971	.	-	.	ID=gene3283;Dbxref=GeneID:4487415;Name=AHA_3287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3287
NC_008570.1	RefSeq	CDS	3704183	3704971	.	-	0	ID=cds3192;Parent=gene3283;Dbxref=Genbank:YP_857778.1,GeneID:4487415;Name=YP_857778.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=tetrathionate reductase subunit B;protein_id=YP_857778.1;transl_table=11
NC_008570.1	RefSeq	gene	3705108	3707192	.	+	.	ID=gene3284;Dbxref=GeneID:4487416;Name=AHA_3288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3288
NC_008570.1	RefSeq	CDS	3705108	3707192	.	+	0	ID=cds3193;Parent=gene3284;Dbxref=Genbank:YP_857779.1,GeneID:4487416;Name=YP_857779.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=two component system histidine kinase;protein_id=YP_857779.1;transl_table=11
NC_008570.1	RefSeq	gene	3707189	3707800	.	+	.	ID=gene3285;Dbxref=GeneID:4487417;Name=AHA_3289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3289
NC_008570.1	RefSeq	CDS	3707189	3707800	.	+	0	ID=cds3194;Parent=gene3285;Dbxref=Genbank:YP_857780.1,GeneID:4487417;Name=YP_857780.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulatory protein FixJ;protein_id=YP_857780.1;transl_table=11
NC_008570.1	RefSeq	gene	3708025	3709719	.	+	.	ID=gene3286;Dbxref=GeneID:4487418;Name=lytS;gbkey=Gene;gene=lytS;gene_biotype=protein_coding;locus_tag=AHA_3290
NC_008570.1	RefSeq	CDS	3708025	3709719	.	+	0	ID=cds3195;Parent=gene3286;Dbxref=Genbank:YP_857781.1,GeneID:4487418;Name=YP_857781.1;Note=identified by similarity to SP:P94513%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694;gbkey=CDS;gene=lytS;product=sensor protein LytS;protein_id=YP_857781.1;transl_table=11
NC_008570.1	RefSeq	gene	3709713	3710450	.	+	.	ID=gene3287;Dbxref=GeneID:4487419;Name=AHA_3291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3291
NC_008570.1	RefSeq	CDS	3709713	3710450	.	+	0	ID=cds3196;Parent=gene3287;Dbxref=Genbank:YP_857782.1,GeneID:4487419;Name=YP_857782.1;Note=unknown function%3B when overproduced it confers drug-resistance;gbkey=CDS;product=two-component response-regulatory protein YehT;protein_id=YP_857782.1;transl_table=11
NC_008570.1	RefSeq	gene	3710666	3712474	.	+	.	ID=gene3288;Dbxref=GeneID:4490954;Name=AHA_3292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3292
NC_008570.1	RefSeq	CDS	3710666	3712474	.	+	0	ID=cds3197;Parent=gene3288;Dbxref=Genbank:YP_857783.1,GeneID:4490954;Name=YP_857783.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;product=carbon starvation protein A;protein_id=YP_857783.1;transl_table=11
NC_008570.1	RefSeq	gene	3712667	3713395	.	+	.	ID=gene3289;Dbxref=GeneID:4490955;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AHA_3293
NC_008570.1	RefSeq	CDS	3712667	3713395	.	+	0	ID=cds3198;Parent=gene3289;Dbxref=Genbank:YP_857784.1,GeneID:4490955;Name=YP_857784.1;Note=alpha-aspartyl dipeptidase%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family;gbkey=CDS;gene=pepE;product=peptidase E;protein_id=YP_857784.1;transl_table=11
NC_008570.1	RefSeq	gene	3713469	3714863	.	+	.	ID=gene3290;Dbxref=GeneID:4490956;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AHA_3294
NC_008570.1	RefSeq	CDS	3713469	3714863	.	+	0	ID=cds3199;Parent=gene3290;Dbxref=Genbank:YP_857785.1,GeneID:4490956;Name=YP_857785.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=YP_857785.1;transl_table=11
NC_008570.1	RefSeq	gene	3714933	3715307	.	-	.	ID=gene3291;Dbxref=GeneID:4490957;Name=AHA_3295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3295
NC_008570.1	RefSeq	CDS	3714933	3715307	.	-	0	ID=cds3200;Parent=gene3291;Dbxref=Genbank:YP_857786.1,GeneID:4490957;Name=YP_857786.1;Note=identified by match to protein family HMM PF06476;gbkey=CDS;product=hypothetical protein;protein_id=YP_857786.1;transl_table=11
NC_008570.1	RefSeq	gene	3715486	3715839	.	+	.	ID=gene3292;Dbxref=GeneID:4490958;Name=AHA_3296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3296
NC_008570.1	RefSeq	CDS	3715486	3715839	.	+	0	ID=cds3201;Parent=gene3292;Dbxref=Genbank:YP_857787.1,GeneID:4490958;Name=YP_857787.1;Note=identified by match to protein family HMM PF02635;gbkey=CDS;product=DsrE/DsrF-like family protein;protein_id=YP_857787.1;transl_table=11
NC_008570.1	RefSeq	gene	3715974	3717056	.	+	.	ID=gene3293;Dbxref=GeneID:4490959;Name=AHA_3297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3297
NC_008570.1	RefSeq	CDS	3715974	3717056	.	+	0	ID=cds3202;Parent=gene3293;Dbxref=Genbank:YP_857788.1,GeneID:4490959;Name=YP_857788.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_857788.1;transl_table=11
NC_008570.1	RefSeq	gene	3717060	3718274	.	-	.	ID=gene3294;Dbxref=GeneID:4490960;Name=AHA_3298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3298
NC_008570.1	RefSeq	CDS	3717060	3718274	.	-	0	ID=cds3203;Parent=gene3294;Dbxref=Genbank:YP_857789.1,GeneID:4490960;Name=YP_857789.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_857789.1;transl_table=11
NC_008570.1	RefSeq	gene	3718404	3720542	.	-	.	ID=gene3295;Dbxref=GeneID:4490961;Name=AHA_3299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3299
NC_008570.1	RefSeq	CDS	3718404	3720542	.	-	0	ID=cds3204;Parent=gene3295;Dbxref=Genbank:YP_857790.1,GeneID:4490961;Name=YP_857790.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726;gbkey=CDS;product=polynucleotide phosphorylase;protein_id=YP_857790.1;transl_table=11
NC_008570.1	RefSeq	gene	3720710	3720979	.	-	.	ID=gene3296;Dbxref=GeneID:4490962;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AHA_3300
NC_008570.1	RefSeq	CDS	3720710	3720979	.	-	0	ID=cds3205;Parent=gene3296;Dbxref=Genbank:YP_857791.1,GeneID:4490962;Name=YP_857791.1;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=YP_857791.1;transl_table=11
NC_008570.1	RefSeq	gene	3721124	3722122	.	-	.	ID=gene3297;Dbxref=GeneID:4490963;Name=AHA_3301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3301
NC_008570.1	RefSeq	CDS	3721124	3722122	.	-	0	ID=cds3206;Parent=gene3297;Dbxref=Genbank:YP_857792.1,GeneID:4490963;Name=YP_857792.1;Note=identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431;gbkey=CDS;product=tRNA pseudouridine synthase B;protein_id=YP_857792.1;transl_table=11
NC_008570.1	RefSeq	gene	3722085	3722519	.	-	.	ID=gene3298;Dbxref=GeneID:4490964;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AHA_3302
NC_008570.1	RefSeq	CDS	3722085	3722519	.	-	0	ID=cds3207;Parent=gene3298;Dbxref=Genbank:YP_857793.1,GeneID:4490964;Name=YP_857793.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=YP_857793.1;transl_table=11
NC_008570.1	RefSeq	gene	3722575	3725268	.	-	.	ID=gene3299;Dbxref=GeneID:4490965;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AHA_3303
NC_008570.1	RefSeq	CDS	3722575	3725268	.	-	0	ID=cds3208;Parent=gene3299;Dbxref=Genbank:YP_857794.1,GeneID:4490965;Name=YP_857794.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=YP_857794.1;transl_table=11
NC_008570.1	RefSeq	gene	3725289	3726791	.	-	.	ID=gene3300;Dbxref=GeneID:4490966;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AHA_3304
NC_008570.1	RefSeq	CDS	3725289	3726791	.	-	0	ID=cds3209;Parent=gene3300;Dbxref=Genbank:YP_857795.1,GeneID:4490966;Name=YP_857795.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=YP_857795.1;transl_table=11
NC_008570.1	RefSeq	gene	3726806	3727333	.	-	.	ID=gene3301;Dbxref=GeneID:4490967;Name=AHA_3305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3305
NC_008570.1	RefSeq	CDS	3726806	3727333	.	-	0	ID=cds3210;Parent=gene3301;Dbxref=Genbank:YP_857796.1,GeneID:4490967;Name=YP_857796.1;Note=identified by match to protein family HMM PF02576;gbkey=CDS;product=hypothetical protein;protein_id=YP_857796.1;transl_table=11
NC_008570.1	RefSeq	gene	3727432	3727508	.	-	.	ID=gene3302;Dbxref=GeneID:4490968;Name=AHA_3306;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3306
NC_008570.1	RefSeq	tRNA	3727432	3727508	.	-	.	ID=rna88;Parent=gene3302;Dbxref=GeneID:4490968;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	exon	3727432	3727508	.	-	.	ID=id90;Parent=rna88;Dbxref=GeneID:4490968;gbkey=tRNA;product=tRNA-Met
NC_008570.1	RefSeq	gene	3727601	3727685	.	-	.	ID=gene3303;Dbxref=GeneID:4490969;Name=AHA_3307;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3307
NC_008570.1	RefSeq	tRNA	3727601	3727685	.	-	.	ID=rna89;Parent=gene3303;Dbxref=GeneID:4490969;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	3727601	3727685	.	-	.	ID=id91;Parent=rna89;Dbxref=GeneID:4490969;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	3727693	3728019	.	-	.	ID=gene3304;Dbxref=GeneID:4490970;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AHA_3308
NC_008570.1	RefSeq	CDS	3727693	3728019	.	-	0	ID=cds3211;Parent=gene3304;Dbxref=Genbank:YP_857797.1,GeneID:4490970;Name=YP_857797.1;Note=identified by similarity to SP:P33582%3B match to protein family HMM PF03840%3B match to protein family HMM TIGR00810;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=YP_857797.1;transl_table=11
NC_008570.1	RefSeq	gene	3728020	3728784	.	-	.	ID=gene3305;Dbxref=GeneID:4490971;Name=tpiA-2;gbkey=Gene;gene=tpiA-2;gene_biotype=protein_coding;locus_tag=AHA_3309
NC_008570.1	RefSeq	CDS	3728020	3728784	.	-	0	ID=cds3212;Parent=gene3305;Dbxref=Genbank:YP_857798.1,GeneID:4490971;Name=YP_857798.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA-2;product=triosephosphate isomerase;protein_id=YP_857798.1;transl_table=11
NC_008570.1	RefSeq	gene	3728916	3730250	.	-	.	ID=gene3306;Dbxref=GeneID:4490972;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AHA_3310
NC_008570.1	RefSeq	CDS	3728916	3730250	.	-	0	ID=cds3213;Parent=gene3306;Dbxref=Genbank:YP_857799.1,GeneID:4490972;Name=YP_857799.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=YP_857799.1;transl_table=11
NC_008570.1	RefSeq	gene	3730268	3731113	.	-	.	ID=gene3307;Dbxref=GeneID:4490973;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AHA_3311
NC_008570.1	RefSeq	CDS	3730268	3731113	.	-	0	ID=cds3214;Parent=gene3307;Dbxref=Genbank:YP_857800.1,GeneID:4490973;Name=YP_857800.1;Note=identified by similarity to SP:P26282%3B match to protein family HMM PF00809%3B match to protein family HMM TIGR01496;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=YP_857800.1;transl_table=11
NC_008570.1	RefSeq	gene	3731176	3733125	.	-	.	ID=gene3308;Dbxref=GeneID:4489892;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=AHA_3312
NC_008570.1	RefSeq	CDS	3731176	3733125	.	-	0	ID=cds3215;Parent=gene3308;Dbxref=Genbank:YP_857801.1,GeneID:4489892;Name=YP_857801.1;Note=identified by similarity to SP:P0AAI3%3B match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=hflB;product=ATP-dependent metallopeptidase HflB;protein_id=YP_857801.1;transl_table=11
NC_008570.1	RefSeq	gene	3733171	3733800	.	-	.	ID=gene3309;Dbxref=GeneID:4489893;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=AHA_3313
NC_008570.1	RefSeq	CDS	3733171	3733800	.	-	0	ID=cds3216;Parent=gene3309;Dbxref=Genbank:YP_857802.1,GeneID:4489893;Name=YP_857802.1;Note=identified by match to protein family HMM PF01728;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase J;protein_id=YP_857802.1;transl_table=11
NC_008570.1	RefSeq	gene	3733898	3734194	.	+	.	ID=gene3310;Dbxref=GeneID:4489894;Name=AHA_3314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3314
NC_008570.1	RefSeq	CDS	3733898	3734194	.	+	0	ID=cds3217;Parent=gene3310;Dbxref=Genbank:YP_857803.1,GeneID:4489894;Name=YP_857803.1;Note=identified by match to protein family HMM PF01985%3B match to protein family HMM TIGR00253;gbkey=CDS;product=hypothetical protein;protein_id=YP_857803.1;transl_table=11
NC_008570.1	RefSeq	gene	3734299	3734892	.	+	.	ID=gene3311;Dbxref=GeneID:4489895;Name=AHA_3315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3315
NC_008570.1	RefSeq	CDS	3734299	3734892	.	+	0	ID=cds3218;Parent=gene3311;Dbxref=Genbank:YP_857804.1,GeneID:4489895;Name=YP_857804.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857804.1;transl_table=11
NC_008570.1	RefSeq	gene	3734940	3735416	.	-	.	ID=gene3312;Dbxref=GeneID:4489896;Name=AHA_3316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3316
NC_008570.1	RefSeq	CDS	3734940	3735416	.	-	0	ID=cds3219;Parent=gene3312;Dbxref=Genbank:YP_857805.1,GeneID:4489896;Name=YP_857805.1;Note=identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;product=transcription elongation factor GreA;protein_id=YP_857805.1;transl_table=11
NC_008570.1	RefSeq	gene	3735571	3736470	.	-	.	ID=gene3313;Dbxref=GeneID:4489897;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AHA_3317
NC_008570.1	RefSeq	CDS	3735571	3736470	.	-	0	ID=cds3220;Parent=gene3313;Dbxref=Genbank:YP_857806.1,GeneID:4489897;Name=YP_857806.1;Note=with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B Vibrio parahaemolyticus protein is associated with the polar flagella;gbkey=CDS;gene=motB;product=flagellar motor protein MotB;protein_id=YP_857806.1;transl_table=11
NC_008570.1	RefSeq	gene	3736479	3737237	.	-	.	ID=gene3314;Dbxref=GeneID:4489898;Name=AHA_3318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3318
NC_008570.1	RefSeq	CDS	3736479	3737237	.	-	0	ID=cds3221;Parent=gene3314;Dbxref=Genbank:YP_857807.1,GeneID:4489898;Name=YP_857807.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=chemotaxis protein PomA;protein_id=YP_857807.1;transl_table=11
NC_008570.1	RefSeq	gene	3737212	3737709	.	+	.	ID=gene3315;Dbxref=GeneID:4489899;Name=AHA_3319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3319
NC_008570.1	RefSeq	CDS	3737212	3737709	.	+	0	ID=cds3222;Parent=gene3315;Dbxref=Genbank:YP_857808.1,GeneID:4489899;Name=YP_857808.1;Note=identified by match to protein family HMM PF02609%3B match to protein family HMM TIGR01280;gbkey=CDS;product=exodeoxyribonuclease VII small subunit;protein_id=YP_857808.1;transl_table=11
NC_008570.1	RefSeq	gene	3737710	3738600	.	+	.	ID=gene3316;Dbxref=GeneID:4489900;Name=AHA_3320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3320
NC_008570.1	RefSeq	CDS	3737710	3738600	.	+	0	ID=cds3223;Parent=gene3316;Dbxref=Genbank:YP_857809.1,GeneID:4489900;Name=YP_857809.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;product=geranyltranstransferase;protein_id=YP_857809.1;transl_table=11
NC_008570.1	RefSeq	gene	3738622	3740487	.	+	.	ID=gene3317;Dbxref=GeneID:4489901;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AHA_3321
NC_008570.1	RefSeq	CDS	3738622	3740487	.	+	0	ID=cds3224;Parent=gene3317;Dbxref=Genbank:YP_857810.1,GeneID:4489901;Name=YP_857810.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204;gbkey=CDS;gene=dxs;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=YP_857810.1;transl_table=11
NC_008570.1	RefSeq	gene	3740562	3741503	.	-	.	ID=gene3318;Dbxref=GeneID:4489902;Name=AHA_3322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3322
NC_008570.1	RefSeq	CDS	3740562	3741503	.	-	0	ID=cds3225;Parent=gene3318;Dbxref=Genbank:YP_857811.1,GeneID:4489902;Name=YP_857811.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=dipeptide transport system permease DppC;protein_id=YP_857811.1;transl_table=11
NC_008570.1	RefSeq	gene	3741507	3742481	.	-	.	ID=gene3319;Dbxref=GeneID:4489903;Name=AHA_3323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3323
NC_008570.1	RefSeq	CDS	3741507	3742481	.	-	0	ID=cds3226;Parent=gene3319;Dbxref=Genbank:YP_857812.1,GeneID:4489903;Name=YP_857812.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=dipeptide transport system permease DppB;protein_id=YP_857812.1;transl_table=11
NC_008570.1	RefSeq	gene	3742581	3744137	.	-	.	ID=gene3320;Dbxref=GeneID:4489904;Name=AHA_3324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3324
NC_008570.1	RefSeq	CDS	3742581	3744137	.	-	0	ID=cds3227;Parent=gene3320;Dbxref=Genbank:YP_857813.1,GeneID:4489904;Name=YP_857813.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=peptide ABC transporter periplasmic peptide-binding protein;protein_id=YP_857813.1;transl_table=11
NC_008570.1	RefSeq	gene	3744208	3745932	.	-	.	ID=gene3321;Dbxref=GeneID:4489905;Name=AHA_3325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3325
NC_008570.1	RefSeq	CDS	3744208	3745932	.	-	0	ID=cds3228;Parent=gene3321;Dbxref=Genbank:YP_857814.1,GeneID:4489905;Name=YP_857814.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=YP_857814.1;transl_table=11
NC_008570.1	RefSeq	gene	3746443	3746937	.	-	.	ID=gene3322;Dbxref=GeneID:4489906;Name=AHA_3326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3326
NC_008570.1	RefSeq	CDS	3746443	3746937	.	-	0	ID=cds3229;Parent=gene3322;Dbxref=Genbank:YP_857815.1,GeneID:4489906;Name=YP_857815.1;Note=identified by match to protein family HMM PF04608;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=YP_857815.1;transl_table=11
NC_008570.1	RefSeq	gene	3746934	3747893	.	-	.	ID=gene3323;Dbxref=GeneID:4489907;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AHA_3327
NC_008570.1	RefSeq	CDS	3746934	3747893	.	-	0	ID=cds3230;Parent=gene3323;Dbxref=Genbank:YP_857816.1,GeneID:4489907;Name=YP_857816.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01379;gbkey=CDS;gene=thiL;product=thiamine-monophosphate kinase;protein_id=YP_857816.1;transl_table=11
NC_008570.1	RefSeq	gene	3747954	3748367	.	-	.	ID=gene3324;Dbxref=GeneID:4489908;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AHA_3328
NC_008570.1	RefSeq	CDS	3747954	3748367	.	-	0	ID=cds3231;Parent=gene3324;Dbxref=Genbank:YP_857817.1,GeneID:4489908;Name=YP_857817.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;product=transcription antitermination factor NusB;protein_id=YP_857817.1;transl_table=11
NC_008570.1	RefSeq	gene	3748382	3748966	.	-	.	ID=gene3325;Dbxref=GeneID:4489909;Name=ribE-2;gbkey=Gene;gene=ribE-2;gene_biotype=protein_coding;locus_tag=AHA_3329
NC_008570.1	RefSeq	CDS	3748382	3748966	.	-	0	ID=cds3232;Parent=gene3325;Dbxref=Genbank:YP_857818.1,GeneID:4489909;Name=YP_857818.1;Note=identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114;gbkey=CDS;gene=ribE-2;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=YP_857818.1;transl_table=11
NC_008570.1	RefSeq	gene	3749050	3750249	.	+	.	ID=gene3326;Dbxref=GeneID:4489910;Name=AHA_3330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3330
NC_008570.1	RefSeq	CDS	3749050	3750249	.	+	0	ID=cds3233;Parent=gene3326;Dbxref=Genbank:YP_857819.1,GeneID:4489910;Name=YP_857819.1;Note=identified by match to protein family HMM PF00089;gbkey=CDS;product=tonin;protein_id=YP_857819.1;transl_table=11
NC_008570.1	RefSeq	gene	3750313	3751422	.	-	.	ID=gene3327;Dbxref=GeneID:4490111;Name=AHA_3331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3331
NC_008570.1	RefSeq	CDS	3750313	3751422	.	-	0	ID=cds3234;Parent=gene3327;Dbxref=Genbank:YP_857820.1,GeneID:4490111;Name=YP_857820.1;Note=identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00506;gbkey=CDS;product=riboflavin biosynthesis protein RibA;protein_id=YP_857820.1;transl_table=11
NC_008570.1	RefSeq	gene	3751564	3752217	.	-	.	ID=gene3328;Dbxref=GeneID:4490112;Name=ribE-3;gbkey=Gene;gene=ribE-3;gene_biotype=protein_coding;locus_tag=AHA_3332
NC_008570.1	RefSeq	CDS	3751564	3752217	.	-	0	ID=cds3235;Parent=gene3328;Dbxref=Genbank:YP_857821.1,GeneID:4490112;Name=YP_857821.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;gene=ribE-3;product=riboflavin synthase subunit alpha;protein_id=YP_857821.1;transl_table=11
NC_008570.1	RefSeq	gene	3752272	3753381	.	-	.	ID=gene3329;Dbxref=GeneID:4490113;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AHA_3333
NC_008570.1	RefSeq	CDS	3752272	3753381	.	-	0	ID=cds3236;Parent=gene3329;Dbxref=Genbank:YP_857822.1,GeneID:4490113;Name=YP_857822.1;Note=identified by similarity to SP:P25539%3B match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326;gbkey=CDS;gene=ribD;product=riboflavin biosynthesis protein RibD;protein_id=YP_857822.1;transl_table=11
NC_008570.1	RefSeq	gene	3753478	3753927	.	-	.	ID=gene3330;Dbxref=GeneID:4490114;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AHA_3334
NC_008570.1	RefSeq	CDS	3753478	3753927	.	-	0	ID=cds3237;Parent=gene3330;Dbxref=Genbank:YP_857823.1,GeneID:4490114;Name=YP_857823.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;gene=nrdR;product=transcriptional regulator NrdR;protein_id=YP_857823.1;transl_table=11
NC_008570.1	RefSeq	gene	3754061	3754540	.	-	.	ID=gene3331;Dbxref=GeneID:4490115;Name=AHA_3335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3335
NC_008570.1	RefSeq	CDS	3754061	3754540	.	-	0	ID=cds3238;Parent=gene3331;Dbxref=Genbank:YP_857824.1,GeneID:4490115;Name=YP_857824.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857824.1;transl_table=11
NC_008570.1	RefSeq	gene	3754625	3755878	.	-	.	ID=gene3332;Dbxref=GeneID:4490116;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AHA_3336
NC_008570.1	RefSeq	CDS	3754625	3755878	.	-	0	ID=cds3239;Parent=gene3332;Dbxref=Genbank:YP_857825.1,GeneID:4490116;Name=YP_857825.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=YP_857825.1;transl_table=11
NC_008570.1	RefSeq	gene	3756365	3757027	.	+	.	ID=gene3333;Dbxref=GeneID:4490117;Name=AHA_3337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3337
NC_008570.1	RefSeq	CDS	3756365	3757027	.	+	0	ID=cds3240;Parent=gene3333;Dbxref=Genbank:YP_857826.1,GeneID:4490117;Name=YP_857826.1;Note=identified by match to protein family HMM PF04828;gbkey=CDS;product=ADP-ribosylglycohydrolase family protein;protein_id=YP_857826.1;transl_table=11
NC_008570.1	RefSeq	gene	3757176	3757820	.	+	.	ID=gene3334;Dbxref=GeneID:4490118;Name=AHA_3338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3338
NC_008570.1	RefSeq	CDS	3757176	3757820	.	+	0	ID=cds3241;Parent=gene3334;Dbxref=Genbank:YP_857827.1,GeneID:4490118;Name=YP_857827.1;Note=identified by match to protein family HMM PF06192;gbkey=CDS;product=chaperone protein TorD;protein_id=YP_857827.1;transl_table=11
NC_008570.1	RefSeq	gene	3757828	3758196	.	+	.	ID=gene3335;Dbxref=GeneID:4490119;Name=AHA_3339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3339
NC_008570.1	RefSeq	CDS	3757828	3758196	.	+	0	ID=cds3242;Parent=gene3335;Dbxref=Genbank:YP_857828.1,GeneID:4490119;Name=YP_857828.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857828.1;transl_table=11
NC_008570.1	RefSeq	gene	3758366	3759505	.	+	.	ID=gene3336;Dbxref=GeneID:4490120;Name=AHA_3340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3340
NC_008570.1	RefSeq	CDS	3758366	3759505	.	+	0	ID=cds3243;Parent=gene3336;Dbxref=Genbank:YP_857829.1,GeneID:4490120;Name=YP_857829.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857829.1;transl_table=11
NC_008570.1	RefSeq	gene	3759477	3760127	.	+	.	ID=gene3337;Dbxref=GeneID:4490121;Name=AHA_3341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3341
NC_008570.1	RefSeq	CDS	3759477	3760127	.	+	0	ID=cds3244;Parent=gene3337;Dbxref=Genbank:YP_857830.1,GeneID:4490121;Name=YP_857830.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857830.1;transl_table=11
NC_008570.1	RefSeq	gene	3760233	3762683	.	+	.	ID=gene3338;Dbxref=GeneID:4490122;Name=AHA_3342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3342
NC_008570.1	RefSeq	CDS	3760233	3762683	.	+	0	ID=cds3245;Parent=gene3338;Dbxref=Genbank:YP_857831.1,GeneID:4490122;Name=YP_857831.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=protein MorA;protein_id=YP_857831.1;transl_table=11
NC_008570.1	RefSeq	gene	3762730	3763026	.	-	.	ID=gene3339;Dbxref=GeneID:4490123;Name=AHA_3343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3343
NC_008570.1	RefSeq	CDS	3762730	3763026	.	-	0	ID=cds3246;Parent=gene3339;Dbxref=Genbank:YP_857832.1,GeneID:4490123;Name=YP_857832.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857832.1;transl_table=11
NC_008570.1	RefSeq	gene	3763195	3765141	.	+	.	ID=gene3340;Dbxref=GeneID:4490124;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=AHA_3344
NC_008570.1	RefSeq	CDS	3763195	3765141	.	+	0	ID=cds3247;Parent=gene3340;Dbxref=Genbank:YP_857833.1,GeneID:4490124;Name=YP_857833.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;gene=acsA;product=acetyl-CoA synthetase;protein_id=YP_857833.1;transl_table=11
NC_008570.1	RefSeq	gene	3765408	3765857	.	+	.	ID=gene3341;Dbxref=GeneID:4490125;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AHA_3345
NC_008570.1	RefSeq	CDS	3765408	3765857	.	+	0	ID=cds3248;Parent=gene3341;Dbxref=Genbank:YP_857834.1,GeneID:4490125;Name=YP_857834.1;Note=catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis;gbkey=CDS;gene=aroQ;product=3-dehydroquinate dehydratase;protein_id=YP_857834.1;transl_table=11
NC_008570.1	RefSeq	gene	3765894	3766349	.	+	.	ID=gene3342;Dbxref=GeneID:4490126;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AHA_3346
NC_008570.1	RefSeq	CDS	3765894	3766349	.	+	0	ID=cds3249;Parent=gene3342;Dbxref=Genbank:YP_857835.1,GeneID:4490126;Name=YP_857835.1;Note=identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531;gbkey=CDS;gene=accB;product=acetyl-CoA carboxylase%2C biotin carboxyl carrier protein;protein_id=YP_857835.1;transl_table=11
NC_008570.1	RefSeq	gene	3766365	3767705	.	+	.	ID=gene3343;Dbxref=GeneID:4490127;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AHA_3347
NC_008570.1	RefSeq	CDS	3766365	3767705	.	+	0	ID=cds3250;Parent=gene3343;Dbxref=Genbank:YP_857836.1,GeneID:4490127;Name=YP_857836.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR00514;gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase%2C biotin carboxylase;protein_id=YP_857836.1;transl_table=11
NC_008570.1	RefSeq	gene	3767833	3768096	.	+	.	ID=gene3344;Dbxref=GeneID:4490128;Name=AHA_3348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3348
NC_008570.1	RefSeq	CDS	3767833	3768096	.	+	0	ID=cds3251;Parent=gene3344;Dbxref=Genbank:YP_857837.1,GeneID:4490128;Name=YP_857837.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857837.1;transl_table=11
NC_008570.1	RefSeq	gene	3768086	3769564	.	+	.	ID=gene3345;Dbxref=GeneID:4490129;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AHA_3349
NC_008570.1	RefSeq	CDS	3768086	3769564	.	+	0	ID=cds3252;Parent=gene3345;Dbxref=Genbank:YP_857838.1,GeneID:4490129;Name=YP_857838.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium/panthothenate symporter;protein_id=YP_857838.1;transl_table=11
NC_008570.1	RefSeq	gene	3769642	3771069	.	+	.	ID=gene3346;Dbxref=GeneID:4490130;Name=AHA_3350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3350
NC_008570.1	RefSeq	CDS	3769642	3771069	.	+	0	ID=cds3253;Parent=gene3346;Dbxref=Genbank:YP_857839.1,GeneID:4490130;Name=YP_857839.1;Note=identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378;gbkey=CDS;product=pts system N-acetylglucosamine-specific eiicba component (eiicba-nag)(eii-nag);protein_id=YP_857839.1;transl_table=11
NC_008570.1	RefSeq	gene	3771072	3771920	.	-	.	ID=gene3347;Dbxref=GeneID:4489445;Name=AHA_3351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3351
NC_008570.1	RefSeq	CDS	3771072	3771920	.	-	0	ID=cds3254;Parent=gene3347;Dbxref=Genbank:YP_857840.1,GeneID:4489445;Name=YP_857840.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional activator;protein_id=YP_857840.1;transl_table=11
NC_008570.1	RefSeq	gene	3772045	3773061	.	+	.	ID=gene3348;Dbxref=GeneID:4489446;Name=AHA_3352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3352
NC_008570.1	RefSeq	CDS	3772045	3773061	.	+	0	ID=cds3255;Parent=gene3348;Dbxref=Genbank:YP_857841.1,GeneID:4489446;Name=YP_857841.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM TIGR02817;gbkey=CDS;product=zinc-containing alcohol dehydrogenase superfamily protein;protein_id=YP_857841.1;transl_table=11
NC_008570.1	RefSeq	gene	3773577	3774455	.	+	.	ID=gene3349;Dbxref=GeneID:4489447;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AHA_3353
NC_008570.1	RefSeq	CDS	3773577	3774455	.	+	0	ID=cds3256;Parent=gene3349;Dbxref=Genbank:YP_857842.1,GeneID:4489447;Name=YP_857842.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=50S ribosomal protein L11 methyltransferase;protein_id=YP_857842.1;transl_table=11
NC_008570.1	RefSeq	gene	3774651	3775628	.	+	.	ID=gene3350;Dbxref=GeneID:4489448;Name=AHA_3354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3354
NC_008570.1	RefSeq	CDS	3774651	3775628	.	+	0	ID=cds3257;Parent=gene3350;Dbxref=Genbank:YP_857843.1,GeneID:4489448;Name=YP_857843.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;product=glyoxylate reductase;protein_id=YP_857843.1;transl_table=11
NC_008570.1	RefSeq	gene	3775702	3776265	.	+	.	ID=gene3351;Dbxref=GeneID:4489449;Name=AHA_3355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3355
NC_008570.1	RefSeq	CDS	3775702	3776265	.	+	0	ID=cds3258;Parent=gene3351;Dbxref=Genbank:YP_857844.1,GeneID:4489449;Name=YP_857844.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=nodulation protein L;protein_id=YP_857844.1;transl_table=11
NC_008570.1	RefSeq	gene	3776814	3777362	.	-	.	ID=gene3352;Dbxref=GeneID:4489450;Name=AHA_3356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3356
NC_008570.1	RefSeq	CDS	3776814	3777362	.	-	0	ID=cds3259;Parent=gene3352;Dbxref=Genbank:YP_857845.1,GeneID:4489450;Name=YP_857845.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=YP_857845.1;transl_table=11
NC_008570.1	RefSeq	gene	3777469	3779484	.	-	.	ID=gene3353;Dbxref=GeneID:4489451;Name=AHA_3357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3357
NC_008570.1	RefSeq	CDS	3777469	3779484	.	-	0	ID=cds3260;Parent=gene3353;Dbxref=Genbank:YP_857846.1,GeneID:4489451;Name=YP_857846.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF00724%3B match to protein family HMM PF07992;gbkey=CDS;product=2%2C4-dienoyl-CoA reductase;protein_id=YP_857846.1;transl_table=11
NC_008570.1	RefSeq	gene	3779795	3781639	.	+	.	ID=gene3354;Dbxref=GeneID:4489452;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AHA_3358
NC_008570.1	RefSeq	CDS	3779795	3781639	.	+	0	ID=cds3261;Parent=gene3354;Dbxref=Genbank:YP_857847.1,GeneID:4489452;Name=YP_857847.1;Note=identified by match to protein family HMM PF01343%3B match to protein family HMM TIGR00705%3B match to protein family HMM TIGR00706;gbkey=CDS;gene=sppA;product=signal peptide peptidase SppA%2C 67K type;protein_id=YP_857847.1;transl_table=11
NC_008570.1	RefSeq	gene	3781707	3782264	.	-	.	ID=gene3355;Dbxref=GeneID:4489453;Name=AHA_3359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3359
NC_008570.1	RefSeq	CDS	3781707	3782264	.	-	0	ID=cds3262;Parent=gene3355;Dbxref=Genbank:YP_857848.1,GeneID:4489453;Name=YP_857848.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_857848.1;transl_table=11
NC_008570.1	RefSeq	gene	3782271	3783071	.	-	.	ID=gene3356;Dbxref=GeneID:4489454;Name=AHA_3360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3360
NC_008570.1	RefSeq	CDS	3782271	3783071	.	-	0	ID=cds3263;Parent=gene3356;Dbxref=Genbank:YP_857849.1,GeneID:4489454;Name=YP_857849.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857849.1;transl_table=11
NC_008570.1	RefSeq	gene	3783326	3784699	.	+	.	ID=gene3357;Dbxref=GeneID:4489455;Name=gap-1;gbkey=Gene;gene=gap-1;gene_biotype=protein_coding;locus_tag=AHA_3361
NC_008570.1	RefSeq	CDS	3783326	3784699	.	+	0	ID=cds3264;Parent=gene3357;Dbxref=Genbank:YP_857850.1,GeneID:4489455;Name=YP_857850.1;Note=catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium%3B NAD and NADP dependent;gbkey=CDS;gene=gap-1;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_857850.1;transl_table=11
NC_008570.1	RefSeq	gene	3784740	3785033	.	+	.	ID=gene3358;Dbxref=GeneID:4489456;Name=AHA_3362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3362
NC_008570.1	RefSeq	CDS	3784740	3785033	.	+	0	ID=cds3265;Parent=gene3358;Dbxref=Genbank:YP_857851.1,GeneID:4489456;Name=YP_857851.1;Note=identified by match to protein family HMM PF07023;gbkey=CDS;product=general negative regulator of transcription subunit 1;protein_id=YP_857851.1;transl_table=11
NC_008570.1	RefSeq	gene	3785130	3786788	.	-	.	ID=gene3359;Dbxref=GeneID:4489457;Name=AHA_3363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3363
NC_008570.1	RefSeq	CDS	3785130	3786788	.	-	0	ID=cds3266;Parent=gene3359;Dbxref=Genbank:YP_857852.1,GeneID:4489457;Name=YP_857852.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857852.1;transl_table=11
NC_008570.1	RefSeq	gene	3786797	3788911	.	-	.	ID=gene3360;Dbxref=GeneID:4489458;Name=AHA_3364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3364
NC_008570.1	RefSeq	CDS	3786797	3788911	.	-	0	ID=cds3267;Parent=gene3360;Dbxref=Genbank:YP_857853.1,GeneID:4489458;Name=YP_857853.1;Note=identified by match to protein family HMM PF07728;gbkey=CDS;product=MoxR-like protein;protein_id=YP_857853.1;transl_table=11
NC_008570.1	RefSeq	gene	3789179	3790186	.	-	.	ID=gene3361;Dbxref=GeneID:4489459;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AHA_3365
NC_008570.1	RefSeq	CDS	3789179	3790186	.	-	0	ID=cds3268;Parent=gene3361;Dbxref=Genbank:YP_857854.1,GeneID:4489459;Name=YP_857854.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=YP_857854.1;transl_table=11
NC_008570.1	RefSeq	gene	3790701	3791900	.	+	.	ID=gene3362;Dbxref=GeneID:4489460;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AHA_3366
NC_008570.1	RefSeq	CDS	3790701	3791900	.	+	0	ID=cds3269;Parent=gene3362;Dbxref=Genbank:YP_857855.1,GeneID:4489460;Name=YP_857855.1;Note=identified by similarity to SP:P19933%3B match to protein family HMM PF03616%3B match to protein family HMM TIGR00210;gbkey=CDS;gene=gltS;product=sodium/glutamate symporter;protein_id=YP_857855.1;transl_table=11
NC_008570.1	RefSeq	gene	3792087	3793958	.	-	.	ID=gene3363;Dbxref=GeneID:4489461;Name=AHA_3367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3367
NC_008570.1	RefSeq	CDS	3792087	3793958	.	-	0	ID=cds3270;Parent=gene3363;Dbxref=Genbank:YP_857856.1,GeneID:4489461;Name=YP_857856.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_857856.1;transl_table=11
NC_008570.1	RefSeq	gene	3794212	3795310	.	+	.	ID=gene3364;Dbxref=GeneID:4489462;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AHA_3368
NC_008570.1	RefSeq	CDS	3794212	3794286	.	+	0	ID=cds3271;Parent=gene3364;Dbxref=Genbank:YP_857857.1,GeneID:4489462;Name=YP_857857.1;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_857857.1;transl_table=11
NC_008570.1	RefSeq	CDS	3794288	3795310	.	+	0	ID=cds3271;Parent=gene3364;Dbxref=Genbank:YP_857857.1,GeneID:4489462;Name=YP_857857.1;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_857857.1;transl_table=11
NC_008570.1	RefSeq	gene	3795335	3796870	.	+	.	ID=gene3365;Dbxref=GeneID:4489463;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AHA_3369
NC_008570.1	RefSeq	CDS	3795335	3796870	.	+	0	ID=cds3272;Parent=gene3365;Dbxref=Genbank:YP_857858.1,GeneID:4489463;Name=YP_857858.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=YP_857858.1;transl_table=11
NC_008570.1	RefSeq	gene	3797000	3797803	.	-	.	ID=gene3366;Dbxref=GeneID:4490551;Name=AHA_3370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3370
NC_008570.1	RefSeq	CDS	3797000	3797803	.	-	0	ID=cds3273;Parent=gene3366;Dbxref=Genbank:YP_857859.1,GeneID:4490551;Name=YP_857859.1;Note=identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654;gbkey=CDS;product=PhzF family phenazine biosynthesis protein;protein_id=YP_857859.1;transl_table=11
NC_008570.1	RefSeq	gene	3797999	3799792	.	+	.	ID=gene3367;Dbxref=GeneID:4490552;Name=AHA_3371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3371
NC_008570.1	RefSeq	CDS	3797999	3799792	.	+	0	ID=cds3274;Parent=gene3367;Dbxref=Genbank:YP_857860.1,GeneID:4490552;Name=YP_857860.1;Note=identified by match to protein family HMM PF00175%3B match to protein family HMM PF00258%3B match to protein family HMM PF00667%3B match to protein family HMM TIGR01931;gbkey=CDS;product=sulfite reductase [NADPH] flavoprotein subunit alpha;protein_id=YP_857860.1;transl_table=11
NC_008570.1	RefSeq	gene	3799792	3801504	.	+	.	ID=gene3368;Dbxref=GeneID:4490553;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AHA_3372
NC_008570.1	RefSeq	CDS	3799792	3801504	.	+	0	ID=cds3275;Parent=gene3368;Dbxref=Genbank:YP_857861.1,GeneID:4490553;Name=YP_857861.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;gene=cysI;product=sulfite reductase subunit beta;protein_id=YP_857861.1;transl_table=11
NC_008570.1	RefSeq	gene	3801494	3802300	.	+	.	ID=gene3369;Dbxref=GeneID:4490554;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AHA_3373
NC_008570.1	RefSeq	CDS	3801494	3802300	.	+	0	ID=cds3276;Parent=gene3369;Dbxref=Genbank:YP_857862.1,GeneID:4490554;Name=YP_857862.1;Note=identified by match to protein family HMM PF01507%3B match to protein family HMM TIGR00434%3B match to protein family HMM TIGR02057;gbkey=CDS;gene=cysH;product=phosphoadenosine phosphosulfate reductase;protein_id=YP_857862.1;transl_table=11
NC_008570.1	RefSeq	gene	3802393	3803394	.	-	.	ID=gene3370;Dbxref=GeneID:4490555;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AHA_3374
NC_008570.1	RefSeq	CDS	3802393	3803394	.	-	0	ID=cds3277;Parent=gene3370;Dbxref=Genbank:YP_857863.1,GeneID:4490555;Name=YP_857863.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine betaine transporter periplasmic subunit;protein_id=YP_857863.1;transl_table=11
NC_008570.1	RefSeq	gene	3803391	3804542	.	-	.	ID=gene3371;Dbxref=GeneID:4490556;Name=AHA_3375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3375
NC_008570.1	RefSeq	CDS	3803391	3804542	.	-	0	ID=cds3278;Parent=gene3371;Dbxref=Genbank:YP_857864.1,GeneID:4490556;Name=YP_857864.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glycine betaine/L-proline ABC transporter permease;protein_id=YP_857864.1;transl_table=11
NC_008570.1	RefSeq	gene	3804539	3805735	.	-	.	ID=gene3372;Dbxref=GeneID:4490557;Name=AHA_3376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3376
NC_008570.1	RefSeq	CDS	3804539	3805735	.	-	0	ID=cds3279;Parent=gene3372;Dbxref=Genbank:YP_857865.1,GeneID:4490557;Name=YP_857865.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186;gbkey=CDS;product=glycine betaine/L-proline ABC transporter ATP binding protein;protein_id=YP_857865.1;transl_table=11
NC_008570.1	RefSeq	gene	3806237	3806728	.	-	.	ID=gene3373;Dbxref=GeneID:4490558;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AHA_3377
NC_008570.1	RefSeq	CDS	3806237	3806728	.	-	0	ID=cds3280;Parent=gene3373;Dbxref=Genbank:YP_857866.1,GeneID:4490558;Name=YP_857866.1;Note=identified by similarity to SP:P00379%3B match to protein family HMM PF00186;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=YP_857866.1;transl_table=11
NC_008570.1	RefSeq	gene	3806753	3807220	.	-	.	ID=gene3374;Dbxref=GeneID:4490559;Name=AHA_3378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3378
NC_008570.1	RefSeq	CDS	3806753	3807220	.	-	0	ID=cds3281;Parent=gene3374;Dbxref=Genbank:YP_857867.1,GeneID:4490559;Name=YP_857867.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857867.1;transl_table=11
NC_008570.1	RefSeq	gene	3807217	3808014	.	-	.	ID=gene3375;Dbxref=GeneID:4490560;Name=AHA_3379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3379
NC_008570.1	RefSeq	CDS	3807217	3808014	.	-	0	ID=cds3282;Parent=gene3375;Dbxref=Genbank:YP_857868.1,GeneID:4490560;Name=YP_857868.1;Note=identified by match to protein family HMM PF06738;gbkey=CDS;product=hypothetical protein;protein_id=YP_857868.1;transl_table=11
NC_008570.1	RefSeq	gene	3808250	3808591	.	-	.	ID=gene3376;Dbxref=GeneID:4490561;Name=AHA_3380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3380
NC_008570.1	RefSeq	CDS	3808250	3808591	.	-	0	ID=cds3283;Parent=gene3376;Dbxref=Genbank:YP_857869.1,GeneID:4490561;Name=YP_857869.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857869.1;transl_table=11
NC_008570.1	RefSeq	gene	3808990	3809520	.	+	.	ID=gene3377;Dbxref=GeneID:4490562;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=AHA_3381
NC_008570.1	RefSeq	CDS	3808990	3809520	.	+	0	ID=cds3284;Parent=gene3377;Dbxref=Genbank:YP_857870.1,GeneID:4490562;Name=YP_857870.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=YP_857870.1;transl_table=11
NC_008570.1	RefSeq	gene	3810055	3811281	.	-	.	ID=gene3378;Dbxref=GeneID:4490563;Name=AHA_3382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3382
NC_008570.1	RefSeq	CDS	3810055	3811281	.	-	0	ID=cds3285;Parent=gene3378;Dbxref=Genbank:YP_857871.1,GeneID:4490563;Name=YP_857871.1;Note=FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_857871.1;transl_table=11
NC_008570.1	RefSeq	gene	3811278	3812003	.	-	.	ID=gene3379;Dbxref=GeneID:4490564;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AHA_3383
NC_008570.1	RefSeq	CDS	3811278	3812003	.	-	0	ID=cds3286;Parent=gene3379;Dbxref=Genbank:YP_857872.1,GeneID:4490564;Name=YP_857872.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_857872.1;transl_table=11
NC_008570.1	RefSeq	gene	3812013	3812474	.	-	.	ID=gene3380;Dbxref=GeneID:4490565;Name=AHA_3384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3384
NC_008570.1	RefSeq	CDS	3812013	3812474	.	-	0	ID=cds3287;Parent=gene3380;Dbxref=Genbank:YP_857873.1,GeneID:4490565;Name=YP_857873.1;Note=identified by match to protein family HMM PF07977;gbkey=CDS;product=thioester dehydrase family protein;protein_id=YP_857873.1;transl_table=11
NC_008570.1	RefSeq	gene	3812467	3813651	.	-	.	ID=gene3381;Dbxref=GeneID:4490566;Name=AHA_3385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3385
NC_008570.1	RefSeq	CDS	3812467	3813651	.	-	0	ID=cds3288;Parent=gene3381;Dbxref=Genbank:YP_857874.1,GeneID:4490566;Name=YP_857874.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_857874.1;transl_table=11
NC_008570.1	RefSeq	gene	3813648	3814205	.	-	.	ID=gene3382;Dbxref=GeneID:4490567;Name=AHA_3386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3386
NC_008570.1	RefSeq	CDS	3813648	3814205	.	-	0	ID=cds3289;Parent=gene3382;Dbxref=Genbank:YP_857875.1,GeneID:4490567;Name=YP_857875.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857875.1;transl_table=11
NC_008570.1	RefSeq	gene	3814202	3816562	.	-	.	ID=gene3383;Dbxref=GeneID:4490568;Name=AHA_3387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3387
NC_008570.1	RefSeq	CDS	3814202	3816562	.	-	0	ID=cds3290;Parent=gene3383;Dbxref=Genbank:YP_857876.1,GeneID:4490568;Name=YP_857876.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857876.1;transl_table=11
NC_008570.1	RefSeq	gene	3816613	3817227	.	-	.	ID=gene3384;Dbxref=GeneID:4490569;Name=AHA_3388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3388
NC_008570.1	RefSeq	CDS	3816613	3817227	.	-	0	ID=cds3291;Parent=gene3384;Dbxref=Genbank:YP_857877.1,GeneID:4490569;Name=YP_857877.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857877.1;transl_table=11
NC_008570.1	RefSeq	gene	3817224	3817649	.	-	.	ID=gene3385;Dbxref=GeneID:4490570;Name=AHA_3389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3389
NC_008570.1	RefSeq	CDS	3817224	3817649	.	-	0	ID=cds3292;Parent=gene3385;Dbxref=Genbank:YP_857878.1,GeneID:4490570;Name=YP_857878.1;gbkey=CDS;product=4-hydroxybenzoyl-CoA thioesterase;protein_id=YP_857878.1;transl_table=11
NC_008570.1	RefSeq	gene	3817678	3819240	.	-	.	ID=gene3386;Dbxref=GeneID:4489834;Name=AHA_3390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3390
NC_008570.1	RefSeq	CDS	3817678	3819240	.	-	0	ID=cds3293;Parent=gene3386;Dbxref=Genbank:YP_857879.1,GeneID:4489834;Name=YP_857879.1;Note=identified by match to protein family HMM PF00221;gbkey=CDS;product=phenylalanine and histidine ammonia-lyase;protein_id=YP_857879.1;transl_table=11
NC_008570.1	RefSeq	gene	3819227	3820930	.	-	.	ID=gene3387;Dbxref=GeneID:4489835;Name=AHA_3391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3391
NC_008570.1	RefSeq	CDS	3819227	3820930	.	-	0	ID=cds3294;Parent=gene3387;Dbxref=Genbank:YP_857880.1,GeneID:4489835;Name=YP_857880.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_857880.1;transl_table=11
NC_008570.1	RefSeq	gene	3820927	3821298	.	-	.	ID=gene3388;Dbxref=GeneID:4489836;Name=AHA_3392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3392
NC_008570.1	RefSeq	CDS	3820927	3821298	.	-	0	ID=cds3295;Parent=gene3388;Dbxref=Genbank:YP_857881.1,GeneID:4489836;Name=YP_857881.1;Note=identified by match to protein family HMM PF07977;gbkey=CDS;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=YP_857881.1;transl_table=11
NC_008570.1	RefSeq	gene	3821282	3822652	.	-	.	ID=gene3389;Dbxref=GeneID:4489837;Name=AHA_3393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3393
NC_008570.1	RefSeq	CDS	3821282	3822652	.	-	0	ID=cds3296;Parent=gene3389;Dbxref=Genbank:YP_857882.1,GeneID:4489837;Name=YP_857882.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=acyl-CoA synthetase;protein_id=YP_857882.1;transl_table=11
NC_008570.1	RefSeq	gene	3822649	3823287	.	-	.	ID=gene3390;Dbxref=GeneID:4489838;Name=AHA_3394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3394
NC_008570.1	RefSeq	CDS	3822649	3823287	.	-	0	ID=cds3297;Parent=gene3390;Dbxref=Genbank:YP_857883.1,GeneID:4489838;Name=YP_857883.1;gbkey=CDS;product=DNA gyrase subunit B;protein_id=YP_857883.1;transl_table=11
NC_008570.1	RefSeq	gene	3823256	3823504	.	-	.	ID=gene3391;Dbxref=GeneID:4489839;Name=AHA_3395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3395
NC_008570.1	RefSeq	CDS	3823256	3823504	.	-	0	ID=cds3298;Parent=gene3391;Dbxref=Genbank:YP_857884.1,GeneID:4489839;Name=YP_857884.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=YP_857884.1;transl_table=11
NC_008570.1	RefSeq	gene	3823508	3823795	.	-	.	ID=gene3392;Dbxref=GeneID:4489840;Name=AHA_3396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3396
NC_008570.1	RefSeq	CDS	3823508	3823795	.	-	0	ID=cds3299;Parent=gene3392;Dbxref=Genbank:YP_857885.1,GeneID:4489840;Name=YP_857885.1;gbkey=CDS;product=acyl carrier protein;protein_id=YP_857885.1;transl_table=11
NC_008570.1	RefSeq	gene	3823792	3824550	.	-	.	ID=gene3393;Dbxref=GeneID:4489841;Name=AHA_3397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3397
NC_008570.1	RefSeq	CDS	3823792	3824550	.	-	0	ID=cds3300;Parent=gene3393;Dbxref=Genbank:YP_857886.1,GeneID:4489841;Name=YP_857886.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=YP_857886.1;transl_table=11
NC_008570.1	RefSeq	gene	3824535	3825248	.	-	.	ID=gene3394;Dbxref=GeneID:4489842;Name=AHA_3398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3398
NC_008570.1	RefSeq	CDS	3824535	3825248	.	-	0	ID=cds3301;Parent=gene3394;Dbxref=Genbank:YP_857887.1,GeneID:4489842;Name=YP_857887.1;gbkey=CDS;product=beta-ketoacyl synthase domain-containing protein;protein_id=YP_857887.1;transl_table=11
NC_008570.1	RefSeq	gene	3825425	3825889	.	+	.	ID=gene3395;Dbxref=GeneID:4489843;Name=AHA_3399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3399
NC_008570.1	RefSeq	CDS	3825425	3825889	.	+	0	ID=cds3302;Parent=gene3395;Dbxref=Genbank:YP_857888.1,GeneID:4489843;Name=YP_857888.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857888.1;transl_table=11
NC_008570.1	RefSeq	gene	3825908	3826984	.	+	.	ID=gene3396;Dbxref=GeneID:4489844;Name=AHA_3400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3400
NC_008570.1	RefSeq	CDS	3825908	3826984	.	+	0	ID=cds3303;Parent=gene3396;Dbxref=Genbank:YP_857889.1,GeneID:4489844;Name=YP_857889.1;Note=identified by match to protein family HMM PF00891;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=YP_857889.1;transl_table=11
NC_008570.1	RefSeq	gene	3827032	3827247	.	+	.	ID=gene3397;Dbxref=GeneID:4489845;Name=AHA_3401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3401
NC_008570.1	RefSeq	CDS	3827032	3827247	.	+	0	ID=cds3304;Parent=gene3397;Dbxref=Genbank:YP_857890.1,GeneID:4489845;Name=YP_857890.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857890.1;transl_table=11
NC_008570.1	RefSeq	gene	3827293	3828048	.	-	.	ID=gene3398;Dbxref=GeneID:4489846;Name=AHA_3402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3402
NC_008570.1	RefSeq	CDS	3827293	3828048	.	-	0	ID=cds3305;Parent=gene3398;Dbxref=Genbank:YP_857891.1,GeneID:4489846;Name=YP_857891.1;Note=identified by match to protein family HMM PF01223;gbkey=CDS;product=DNA/RNA non-specific endonuclease;protein_id=YP_857891.1;transl_table=11
NC_008570.1	RefSeq	gene	3828292	3829269	.	-	.	ID=gene3399;Dbxref=GeneID:4489847;Name=AHA_3403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3403
NC_008570.1	RefSeq	CDS	3828292	3829269	.	-	0	ID=cds3306;Parent=gene3399;Dbxref=Genbank:YP_857892.1,GeneID:4489847;Name=YP_857892.1;Note=identified by match to protein family HMM PF00034%3B match to protein family HMM PF03150;gbkey=CDS;product=cytochrome c551 peroxidase;protein_id=YP_857892.1;transl_table=11
NC_008570.1	RefSeq	gene	3829719	3830444	.	+	.	ID=gene3400;Dbxref=GeneID:4489848;Name=AHA_3404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3404
NC_008570.1	RefSeq	CDS	3829719	3830444	.	+	0	ID=cds3307;Parent=gene3400;Dbxref=Genbank:YP_857893.1,GeneID:4489848;Name=YP_857893.1;Note=identified by match to protein family HMM PF00194;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_857893.1;transl_table=11
NC_008570.1	RefSeq	gene	3830519	3831427	.	-	.	ID=gene3401;Dbxref=GeneID:4489849;Name=AHA_3405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3405
NC_008570.1	RefSeq	CDS	3830519	3831427	.	-	0	ID=cds3308;Parent=gene3401;Dbxref=Genbank:YP_857894.1,GeneID:4489849;Name=YP_857894.1;Note=identified by match to protein family HMM PF04227;gbkey=CDS;product=indigoidine synthase A like protein;protein_id=YP_857894.1;transl_table=11
NC_008570.1	RefSeq	gene	3831421	3832356	.	-	.	ID=gene3402;Dbxref=GeneID:4489850;Name=AHA_3406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3406
NC_008570.1	RefSeq	CDS	3831421	3832356	.	-	0	ID=cds3309;Parent=gene3402;Dbxref=Genbank:YP_857895.1,GeneID:4489850;Name=YP_857895.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=PfkB family kinase;protein_id=YP_857895.1;transl_table=11
NC_008570.1	RefSeq	gene	3832658	3833170	.	-	.	ID=gene3403;Dbxref=GeneID:4489851;Name=AHA_3407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3407
NC_008570.1	RefSeq	CDS	3832658	3833170	.	-	0	ID=cds3310;Parent=gene3403;Dbxref=Genbank:YP_857896.1,GeneID:4489851;Name=YP_857896.1;Note=identified by match to protein family HMM PF00355%3B match to protein family HMM TIGR02378;gbkey=CDS;product=nitrite reductase [NAD(P)H] large subunit;protein_id=YP_857896.1;transl_table=11
NC_008570.1	RefSeq	gene	3833218	3835803	.	-	.	ID=gene3404;Dbxref=GeneID:4489852;Name=nirB-1;gbkey=Gene;gene=nirB-1;gene_biotype=protein_coding;locus_tag=AHA_3408
NC_008570.1	RefSeq	CDS	3833218	3835803	.	-	0	ID=cds3311;Parent=gene3404;Dbxref=Genbank:YP_857897.1,GeneID:4489852;Name=YP_857897.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM PF04324%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR02374;gbkey=CDS;gene=nirB-1;product=nitrite reductase [NAD(P)H]%2C large subunit;protein_id=YP_857897.1;transl_table=11
NC_008570.1	RefSeq	gene	3835829	3836650	.	-	.	ID=gene3405;Dbxref=GeneID:4487135;Name=AHA_3409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3409
NC_008570.1	RefSeq	CDS	3835829	3836650	.	-	0	ID=cds3312;Parent=gene3405;Dbxref=Genbank:YP_857898.1,GeneID:4487135;Name=YP_857898.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01184;gbkey=CDS;product=nitrate transport ATP-binding protein NrtC;protein_id=YP_857898.1;transl_table=11
NC_008570.1	RefSeq	gene	3836682	3837626	.	-	.	ID=gene3406;Dbxref=GeneID:4487136;Name=AHA_3410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3410
NC_008570.1	RefSeq	CDS	3836682	3837626	.	-	0	ID=cds3313;Parent=gene3406;Dbxref=Genbank:YP_857899.1,GeneID:4487136;Name=YP_857899.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=nitrate transporter component;protein_id=YP_857899.1;transl_table=11
NC_008570.1	RefSeq	gene	3837641	3839140	.	-	.	ID=gene3407;Dbxref=GeneID:4487137;Name=AHA_3411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3411
NC_008570.1	RefSeq	CDS	3837641	3839140	.	-	0	ID=cds3314;Parent=gene3407;Dbxref=Genbank:YP_857900.1,GeneID:4487137;Name=YP_857900.1;gbkey=CDS;product=nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein;protein_id=YP_857900.1;transl_table=11
NC_008570.1	RefSeq	gene	3839437	3840021	.	-	.	ID=gene3408;Dbxref=GeneID:4487138;Name=AHA_3412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3412
NC_008570.1	RefSeq	CDS	3839437	3840021	.	-	0	ID=cds3315;Parent=gene3408;Dbxref=Genbank:YP_857901.1,GeneID:4487138;Name=YP_857901.1;Note=identified by match to protein family HMM PF03861;gbkey=CDS;product=response regulator NasT;protein_id=YP_857901.1;transl_table=11
NC_008570.1	RefSeq	gene	3840161	3840919	.	-	.	ID=gene3409;Dbxref=GeneID:4487139;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=AHA_3413
NC_008570.1	RefSeq	CDS	3840161	3840919	.	-	0	ID=cds3316;Parent=gene3409;Dbxref=Genbank:YP_857902.1,GeneID:4487139;Name=YP_857902.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469;gbkey=CDS;gene=cobA;product=uroporphyrin-III C-methyltransferase;protein_id=YP_857902.1;transl_table=11
NC_008570.1	RefSeq	gene	3841089	3843725	.	-	.	ID=gene3410;Dbxref=GeneID:4487140;Name=AHA_3414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3414
NC_008570.1	RefSeq	CDS	3841089	3843725	.	-	0	ID=cds3317;Parent=gene3410;Dbxref=Genbank:YP_857903.1,GeneID:4487140;Name=YP_857903.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04324%3B match to protein family HMM PF04879;gbkey=CDS;product=nitrate reductase;protein_id=YP_857903.1;transl_table=11
NC_008570.1	RefSeq	gene	3844029	3844535	.	+	.	ID=gene3411;Dbxref=GeneID:4487141;Name=AHA_3415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3415
NC_008570.1	RefSeq	CDS	3844029	3844535	.	+	0	ID=cds3318;Parent=gene3411;Dbxref=Genbank:YP_857904.1,GeneID:4487141;Name=YP_857904.1;Note=identified by match to protein family HMM PF00588;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=YP_857904.1;transl_table=11
NC_008570.1	RefSeq	gene	3844525	3844641	.	+	.	ID=gene3412;Dbxref=GeneID:4487142;Name=AHA_3416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3416
NC_008570.1	RefSeq	CDS	3844525	3844641	.	+	0	ID=cds3319;Parent=gene3412;Dbxref=Genbank:YP_857905.1,GeneID:4487142;Name=YP_857905.1;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_857905.1;transl_table=11
NC_008570.1	RefSeq	gene	3844801	3845541	.	-	.	ID=gene3413;Dbxref=GeneID:4487143;Name=AHA_3417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3417
NC_008570.1	RefSeq	CDS	3844801	3845541	.	-	0	ID=cds3320;Parent=gene3413;Dbxref=Genbank:YP_857906.1,GeneID:4487143;Name=YP_857906.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857906.1;transl_table=11
NC_008570.1	RefSeq	gene	3845728	3846159	.	+	.	ID=gene3414;Dbxref=GeneID:4487144;Name=AHA_3418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3418
NC_008570.1	RefSeq	CDS	3845728	3846159	.	+	0	ID=cds3321;Parent=gene3414;Dbxref=Genbank:YP_857907.1,GeneID:4487144;Name=YP_857907.1;Note=identified by match to protein family HMM PF00582;gbkey=CDS;product=universal stress protein;protein_id=YP_857907.1;transl_table=11
NC_008570.1	RefSeq	gene	3846229	3846864	.	-	.	ID=gene3415;Dbxref=GeneID:4487145;Name=AHA_3419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3419
NC_008570.1	RefSeq	CDS	3846229	3846864	.	-	0	ID=cds3322;Parent=gene3415;Dbxref=Genbank:YP_857908.1,GeneID:4487145;Name=YP_857908.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857908.1;transl_table=11
NC_008570.1	RefSeq	gene	3847018	3848271	.	-	.	ID=gene3416;Dbxref=GeneID:4487146;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AHA_3420
NC_008570.1	RefSeq	CDS	3847018	3848271	.	-	0	ID=cds3323;Parent=gene3416;Dbxref=Genbank:YP_857909.1,GeneID:4487146;Name=YP_857909.1;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=YP_857909.1;transl_table=11
NC_008570.1	RefSeq	gene	3848364	3849467	.	-	.	ID=gene3417;Dbxref=GeneID:4487147;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AHA_3421
NC_008570.1	RefSeq	CDS	3848364	3849467	.	-	0	ID=cds3324;Parent=gene3417;Dbxref=Genbank:YP_857910.1,GeneID:4487147;Name=YP_857910.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=YP_857910.1;transl_table=11
NC_008570.1	RefSeq	gene	3849628	3850020	.	-	.	ID=gene3418;Dbxref=GeneID:4487148;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AHA_3422
NC_008570.1	RefSeq	CDS	3849628	3850020	.	-	0	ID=cds3325;Parent=gene3418;Dbxref=Genbank:YP_857911.1,GeneID:4487148;Name=YP_857911.1;Note=involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS;gbkey=CDS;gene=crl;product=DNA-binding transcriptional regulator Crl;protein_id=YP_857911.1;transl_table=11
NC_008570.1	RefSeq	gene	3850082	3851350	.	-	.	ID=gene3419;Dbxref=GeneID:4487149;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AHA_3423
NC_008570.1	RefSeq	CDS	3850082	3851350	.	-	0	ID=cds3326;Parent=gene3419;Dbxref=Genbank:YP_857912.1,GeneID:4487149;Name=YP_857912.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=YP_857912.1;transl_table=11
NC_008570.1	RefSeq	gene	3851470	3851937	.	-	.	ID=gene3420;Dbxref=GeneID:4487150;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AHA_3424
NC_008570.1	RefSeq	CDS	3851470	3851937	.	-	0	ID=cds3327;Parent=gene3420;Dbxref=Genbank:YP_857913.1,GeneID:4487150;Name=YP_857913.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;gene=gpt;product=xanthine-guanine phosphoribosyltransferase;protein_id=YP_857913.1;transl_table=11
NC_008570.1	RefSeq	gene	3852374	3852487	.	-	.	ID=gene3421;Dbxref=GeneID:4487151;Name=AHA_3425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3425
NC_008570.1	RefSeq	CDS	3852374	3852487	.	-	0	ID=cds3328;Parent=gene3421;Dbxref=Genbank:YP_857914.1,GeneID:4487151;Name=YP_857914.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857914.1;transl_table=11
NC_008570.1	RefSeq	gene	3852857	3854308	.	+	.	ID=gene3422;Dbxref=GeneID:4487152;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AHA_3426
NC_008570.1	RefSeq	CDS	3852857	3854308	.	+	0	ID=cds3329;Parent=gene3422;Dbxref=Genbank:YP_857915.1,GeneID:4487152;Name=YP_857915.1;Note=identified by similarity to SP:P15288%3B match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893;gbkey=CDS;gene=pepD;product=aminoacyl-histidine dipeptidase;protein_id=YP_857915.1;transl_table=11
NC_008570.1	RefSeq	gene	3854650	3854769	.	+	.	ID=gene3423;Dbxref=GeneID:4487153;Name=AHA_3427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3427
NC_008570.1	RefSeq	CDS	3854650	3854769	.	+	0	ID=cds3330;Parent=gene3423;Dbxref=Genbank:YP_857916.1,GeneID:4487153;Name=YP_857916.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857916.1;transl_table=11
NC_008570.1	RefSeq	gene	3854994	3855995	.	-	.	ID=gene3424;Dbxref=GeneID:4487154;Name=AHA_3428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3428
NC_008570.1	RefSeq	CDS	3854994	3855995	.	-	0	ID=cds3331;Parent=gene3424;Dbxref=Genbank:YP_857917.1,GeneID:4487154;Name=YP_857917.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=YP_857917.1;transl_table=11
NC_008570.1	RefSeq	gene	3855992	3857035	.	-	.	ID=gene3425;Dbxref=GeneID:4489676;Name=AHA_3429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3429
NC_008570.1	RefSeq	CDS	3855992	3857035	.	-	0	ID=cds3332;Parent=gene3425;Dbxref=Genbank:YP_857918.1,GeneID:4489676;Name=YP_857918.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppD;protein_id=YP_857918.1;transl_table=11
NC_008570.1	RefSeq	gene	3857061	3858878	.	-	.	ID=gene3426;Dbxref=GeneID:4489677;Name=AHA_3430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3430
NC_008570.1	RefSeq	CDS	3857061	3858878	.	-	0	ID=cds3333;Parent=gene3426;Dbxref=Genbank:YP_857919.1,GeneID:4489677;Name=YP_857919.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide-binding protein OppA;protein_id=YP_857919.1;transl_table=11
NC_008570.1	RefSeq	gene	3858961	3859998	.	-	.	ID=gene3427;Dbxref=GeneID:4489678;Name=AHA_3431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3431
NC_008570.1	RefSeq	CDS	3858961	3859998	.	-	0	ID=cds3334;Parent=gene3427;Dbxref=Genbank:YP_857920.1,GeneID:4489678;Name=YP_857920.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=inner membrane ABC transporter permease YejE;protein_id=YP_857920.1;transl_table=11
NC_008570.1	RefSeq	gene	3860001	3861026	.	-	.	ID=gene3428;Dbxref=GeneID:4489679;Name=AHA_3432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3432
NC_008570.1	RefSeq	CDS	3860001	3861026	.	-	0	ID=cds3335;Parent=gene3428;Dbxref=Genbank:YP_857921.1,GeneID:4489679;Name=YP_857921.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease OppB;protein_id=YP_857921.1;transl_table=11
NC_008570.1	RefSeq	gene	3861765	3864320	.	+	.	ID=gene3429;Dbxref=GeneID:4489680;Name=AHA_3433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3433
NC_008570.1	RefSeq	CDS	3861765	3864320	.	+	0	ID=cds3336;Parent=gene3429;Dbxref=Genbank:YP_857922.1,GeneID:4489680;Name=YP_857922.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=outer membrane protein;protein_id=YP_857922.1;transl_table=11
NC_008570.1	RefSeq	gene	3864431	3865195	.	+	.	ID=gene3430;Dbxref=GeneID:4489681;Name=AHA_3434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3434
NC_008570.1	RefSeq	CDS	3864431	3865195	.	+	0	ID=cds3337;Parent=gene3430;Dbxref=Genbank:YP_857923.1,GeneID:4489681;Name=YP_857923.1;gbkey=CDS;product=TonB system biopolymer transport component;protein_id=YP_857923.1;transl_table=11
NC_008570.1	RefSeq	gene	3865192	3866565	.	+	.	ID=gene3431;Dbxref=GeneID:4489682;Name=AHA_3435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3435
NC_008570.1	RefSeq	CDS	3865192	3866565	.	+	0	ID=cds3338;Parent=gene3431;Dbxref=Genbank:YP_857924.1,GeneID:4489682;Name=YP_857924.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=hypothetical protein;protein_id=YP_857924.1;transl_table=11
NC_008570.1	RefSeq	gene	3866576	3867103	.	+	.	ID=gene3432;Dbxref=GeneID:4489683;Name=AHA_3436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3436
NC_008570.1	RefSeq	CDS	3866576	3867103	.	+	0	ID=cds3339;Parent=gene3432;Dbxref=Genbank:YP_857925.1,GeneID:4489683;Name=YP_857925.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=TonB system transport protein ExbB2;protein_id=YP_857925.1;transl_table=11
NC_008570.1	RefSeq	gene	3867171	3867578	.	+	.	ID=gene3433;Dbxref=GeneID:4489684;Name=AHA_3437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3437
NC_008570.1	RefSeq	CDS	3867171	3867578	.	+	0	ID=cds3340;Parent=gene3433;Dbxref=Genbank:YP_857926.1,GeneID:4489684;Name=YP_857926.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;product=biopolymer transport exbD2 protein;protein_id=YP_857926.1;transl_table=11
NC_008570.1	RefSeq	gene	3867712	3868230	.	+	.	ID=gene3434;Dbxref=GeneID:4489685;Name=AHA_3438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3438
NC_008570.1	RefSeq	CDS	3867712	3868230	.	+	0	ID=cds3341;Parent=gene3434;Dbxref=Genbank:YP_857927.1,GeneID:4489685;Name=YP_857927.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;product=periplasmic protein TonB2;protein_id=YP_857927.1;transl_table=11
NC_008570.1	RefSeq	gene	3868242	3869477	.	+	.	ID=gene3435;Dbxref=GeneID:4489686;Name=AHA_3439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3439
NC_008570.1	RefSeq	CDS	3868242	3869477	.	+	0	ID=cds3342;Parent=gene3435;Dbxref=Genbank:YP_857928.1,GeneID:4489686;Name=YP_857928.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=hypothetical protein;protein_id=YP_857928.1;transl_table=11
NC_008570.1	RefSeq	gene	3869902	3872904	.	-	.	ID=gene3436;Dbxref=GeneID:4489687;Name=AHA_3440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3440
NC_008570.1	RefSeq	CDS	3869902	3872904	.	-	0	ID=cds3343;Parent=gene3436;Dbxref=Genbank:YP_857929.1,GeneID:4489687;Name=YP_857929.1;Note=identified by match to protein family HMM PF00704%3B match to protein family HMM PF02839%3B match to protein family HMM PF06483;gbkey=CDS;product=chitodextrinase;protein_id=YP_857929.1;transl_table=11
NC_008570.1	RefSeq	gene	3873435	3875579	.	+	.	ID=gene3437;Dbxref=GeneID:4489688;Name=AHA_3441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3441
NC_008570.1	RefSeq	CDS	3873435	3875579	.	+	0	ID=cds3344;Parent=gene3437;Dbxref=Genbank:YP_857930.1,GeneID:4489688;Name=YP_857930.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=nuclease;protein_id=YP_857930.1;transl_table=11
NC_008570.1	RefSeq	gene	3875715	3875790	.	-	.	ID=gene3438;Dbxref=GeneID:4489689;Name=AHA_3442;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3442
NC_008570.1	RefSeq	tRNA	3875715	3875790	.	-	.	ID=rna90;Parent=gene3438;Dbxref=GeneID:4489689;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	3875715	3875790	.	-	.	ID=id92;Parent=rna90;Dbxref=GeneID:4489689;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	3875825	3875900	.	-	.	ID=gene3439;Dbxref=GeneID:4489690;Name=AHA_3443;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3443
NC_008570.1	RefSeq	tRNA	3875825	3875900	.	-	.	ID=rna91;Parent=gene3439;Dbxref=GeneID:4489690;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	3875825	3875900	.	-	.	ID=id93;Parent=rna91;Dbxref=GeneID:4489690;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	3875949	3876024	.	-	.	ID=gene3440;Dbxref=GeneID:4489691;Name=AHA_3444;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3444
NC_008570.1	RefSeq	tRNA	3875949	3876024	.	-	.	ID=rna92;Parent=gene3440;Dbxref=GeneID:4489691;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	3875949	3876024	.	-	.	ID=id94;Parent=rna92;Dbxref=GeneID:4489691;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	3876088	3876163	.	-	.	ID=gene3441;Dbxref=GeneID:4489692;Name=AHA_3445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3445
NC_008570.1	RefSeq	tRNA	3876088	3876163	.	-	.	ID=rna93;Parent=gene3441;Dbxref=GeneID:4489692;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	3876088	3876163	.	-	.	ID=id95;Parent=rna93;Dbxref=GeneID:4489692;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	3876192	3876267	.	-	.	ID=gene3442;Dbxref=GeneID:4489693;Name=AHA_3446;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3446
NC_008570.1	RefSeq	tRNA	3876192	3876267	.	-	.	ID=rna94;Parent=gene3442;Dbxref=GeneID:4489693;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	3876192	3876267	.	-	.	ID=id96;Parent=rna94;Dbxref=GeneID:4489693;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	3876505	3877920	.	-	.	ID=gene3443;Dbxref=GeneID:4489694;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AHA_3447
NC_008570.1	RefSeq	CDS	3876505	3877920	.	-	0	ID=cds3345;Parent=gene3443;Dbxref=Genbank:YP_857931.1,GeneID:4489694;Name=YP_857931.1;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=YP_857931.1;transl_table=11
NC_008570.1	RefSeq	gene	3878112	3880283	.	+	.	ID=gene3444;Dbxref=GeneID:4488221;Name=AHA_3448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3448
NC_008570.1	RefSeq	CDS	3878112	3880283	.	+	0	ID=cds3346;Parent=gene3444;Dbxref=Genbank:YP_857932.1,GeneID:4488221;Name=YP_857932.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis transducer;protein_id=YP_857932.1;transl_table=11
NC_008570.1	RefSeq	gene	3880382	3881050	.	+	.	ID=gene3445;Dbxref=GeneID:4488222;Name=AHA_3449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3449
NC_008570.1	RefSeq	CDS	3880382	3881050	.	+	0	ID=cds3347;Parent=gene3445;Dbxref=Genbank:YP_857933.1,GeneID:4488222;Name=YP_857933.1;Note=identified by match to protein family HMM PF04225;gbkey=CDS;product=opacity-associated protein A;protein_id=YP_857933.1;transl_table=11
NC_008570.1	RefSeq	gene	3881323	3881532	.	+	.	ID=gene3446;Dbxref=GeneID:4488223;Name=AHA_3450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3450
NC_008570.1	RefSeq	CDS	3881323	3881532	.	+	0	ID=cds3348;Parent=gene3446;Dbxref=Genbank:YP_857934.1,GeneID:4488223;Name=YP_857934.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;product=hypothetical protein;protein_id=YP_857934.1;transl_table=11
NC_008570.1	RefSeq	gene	3881802	3881881	.	-	.	ID=gene3447;Dbxref=GeneID:4488224;Name=AHA_3451;gbkey=Gene;gene_biotype=tRNA_pseudogene;locus_tag=AHA_3451;pseudo=true
NC_008570.1	RefSeq	tRNA	3881802	3881881	.	-	.	ID=rna95;Parent=gene3447;Dbxref=GeneID:4488224;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_008570.1	RefSeq	exon	3881802	3881881	.	-	.	ID=id97;Parent=rna95;Dbxref=GeneID:4488224;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_008570.1	RefSeq	gene	3881945	3882020	.	-	.	ID=gene3448;Dbxref=GeneID:4488225;Name=AHA_3452;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3452
NC_008570.1	RefSeq	tRNA	3881945	3882020	.	-	.	ID=rna96;Parent=gene3448;Dbxref=GeneID:4488225;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3881945	3882020	.	-	.	ID=id98;Parent=rna96;Dbxref=GeneID:4488225;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882045	3882120	.	-	.	ID=gene3449;Dbxref=GeneID:4488226;Name=AHA_3453;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3453
NC_008570.1	RefSeq	tRNA	3882045	3882120	.	-	.	ID=rna97;Parent=gene3449;Dbxref=GeneID:4488226;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882045	3882120	.	-	.	ID=id99;Parent=rna97;Dbxref=GeneID:4488226;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882145	3882220	.	-	.	ID=gene3450;Dbxref=GeneID:4488227;Name=AHA_3454;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3454
NC_008570.1	RefSeq	tRNA	3882145	3882220	.	-	.	ID=rna98;Parent=gene3450;Dbxref=GeneID:4488227;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882145	3882220	.	-	.	ID=id100;Parent=rna98;Dbxref=GeneID:4488227;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882245	3882320	.	-	.	ID=gene3451;Dbxref=GeneID:4488228;Name=AHA_3455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3455
NC_008570.1	RefSeq	tRNA	3882245	3882320	.	-	.	ID=rna99;Parent=gene3451;Dbxref=GeneID:4488228;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882245	3882320	.	-	.	ID=id101;Parent=rna99;Dbxref=GeneID:4488228;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882345	3882420	.	-	.	ID=gene3452;Dbxref=GeneID:4488229;Name=AHA_3456;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3456
NC_008570.1	RefSeq	tRNA	3882345	3882420	.	-	.	ID=rna100;Parent=gene3452;Dbxref=GeneID:4488229;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882345	3882420	.	-	.	ID=id102;Parent=rna100;Dbxref=GeneID:4488229;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882454	3882529	.	-	.	ID=gene3453;Dbxref=GeneID:4488230;Name=AHA_3457;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3457
NC_008570.1	RefSeq	tRNA	3882454	3882529	.	-	.	ID=rna101;Parent=gene3453;Dbxref=GeneID:4488230;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882454	3882529	.	-	.	ID=id103;Parent=rna101;Dbxref=GeneID:4488230;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882555	3882630	.	-	.	ID=gene3454;Dbxref=GeneID:4488231;Name=AHA_3458;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3458
NC_008570.1	RefSeq	tRNA	3882555	3882630	.	-	.	ID=rna102;Parent=gene3454;Dbxref=GeneID:4488231;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	3882555	3882630	.	-	.	ID=id104;Parent=rna102;Dbxref=GeneID:4488231;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	3882808	3883353	.	-	.	ID=gene3455;Dbxref=GeneID:4488232;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AHA_3459
NC_008570.1	RefSeq	CDS	3882808	3883353	.	-	0	ID=cds3349;Parent=gene3455;Dbxref=Genbank:YP_857935.1,GeneID:4488232;Name=YP_857935.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;gene=orn;product=oligoribonuclease;protein_id=YP_857935.1;transl_table=11
NC_008570.1	RefSeq	gene	3883400	3884479	.	+	.	ID=gene3456;Dbxref=GeneID:4488233;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AHA_3460
NC_008570.1	RefSeq	CDS	3883400	3884479	.	+	0	ID=cds3350;Parent=gene3456;Dbxref=Genbank:YP_857936.1,GeneID:4488233;Name=YP_857936.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;gene=rsgA;product=ribosome-associated GTPase;protein_id=YP_857936.1;transl_table=11
NC_008570.1	RefSeq	gene	3884385	3885380	.	+	.	ID=gene3457;Dbxref=GeneID:4488234;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=AHA_3461
NC_008570.1	RefSeq	CDS	3884385	3885380	.	+	0	ID=cds3351;Parent=gene3457;Dbxref=Genbank:YP_857937.1,GeneID:4488234;Name=YP_857937.1;Note=identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00163;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase;protein_id=YP_857937.1;transl_table=11
NC_008570.1	RefSeq	gene	3885377	3885628	.	+	.	ID=gene3458;Dbxref=GeneID:4488235;Name=AHA_3462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3462
NC_008570.1	RefSeq	CDS	3885377	3885628	.	+	0	ID=cds3352;Parent=gene3458;Dbxref=Genbank:YP_857938.1,GeneID:4488235;Name=YP_857938.1;Note=identified by similarity to GB:CAG21999.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857938.1;transl_table=11
NC_008570.1	RefSeq	gene	3885633	3885884	.	+	.	ID=gene3459;Dbxref=GeneID:4488236;Name=AHA_3463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3463
NC_008570.1	RefSeq	CDS	3885633	3885884	.	+	0	ID=cds3353;Parent=gene3459;Dbxref=Genbank:YP_857939.1,GeneID:4488236;Name=YP_857939.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857939.1;transl_table=11
NC_008570.1	RefSeq	gene	3885887	3886285	.	+	.	ID=gene3460;Dbxref=GeneID:4488237;Name=AHA_3464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3464
NC_008570.1	RefSeq	CDS	3885887	3886285	.	+	0	ID=cds3354;Parent=gene3460;Dbxref=Genbank:YP_857940.1,GeneID:4488237;Name=YP_857940.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857940.1;transl_table=11
NC_008570.1	RefSeq	gene	3886398	3886967	.	-	.	ID=gene3461;Dbxref=GeneID:4488238;Name=AHA_3465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3465
NC_008570.1	RefSeq	CDS	3886398	3886967	.	-	0	ID=cds3355;Parent=gene3461;Dbxref=Genbank:YP_857941.1,GeneID:4488238;Name=YP_857941.1;Note=identified by match to protein family HMM PF04224;gbkey=CDS;product=hypothetical protein;protein_id=YP_857941.1;transl_table=11
NC_008570.1	RefSeq	gene	3887010	3887444	.	-	.	ID=gene3462;Dbxref=GeneID:4488239;Name=AHA_3466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3466
NC_008570.1	RefSeq	CDS	3887010	3887444	.	-	0	ID=cds3356;Parent=gene3462;Dbxref=Genbank:YP_857942.1,GeneID:4488239;Name=YP_857942.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;product=carboxymuconolactone decarboxylase family protein;protein_id=YP_857942.1;transl_table=11
NC_008570.1	RefSeq	gene	3887567	3888370	.	+	.	ID=gene3463;Dbxref=GeneID:4487802;Name=AHA_3467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3467
NC_008570.1	RefSeq	CDS	3887567	3888370	.	+	0	ID=cds3357;Parent=gene3463;Dbxref=Genbank:YP_857943.1,GeneID:4487802;Name=YP_857943.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_857943.1;transl_table=11
NC_008570.1	RefSeq	gene	3888431	3888889	.	-	.	ID=gene3464;Dbxref=GeneID:4487803;Name=AHA_3468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3468
NC_008570.1	RefSeq	CDS	3888431	3888889	.	-	0	ID=cds3358;Parent=gene3464;Dbxref=Genbank:YP_857944.1,GeneID:4487803;Name=YP_857944.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857944.1;transl_table=11
NC_008570.1	RefSeq	gene	3889097	3891070	.	+	.	ID=gene3465;Dbxref=GeneID:4487804;Name=AHA_3469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3469
NC_008570.1	RefSeq	CDS	3889097	3891070	.	+	0	ID=cds3359;Parent=gene3465;Dbxref=Genbank:YP_857945.1,GeneID:4487804;Name=YP_857945.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensory box protein;protein_id=YP_857945.1;transl_table=11
NC_008570.1	RefSeq	gene	3891139	3891645	.	-	.	ID=gene3466;Dbxref=GeneID:4487805;Name=AHA_3470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3470
NC_008570.1	RefSeq	CDS	3891139	3891645	.	-	0	ID=cds3360;Parent=gene3466;Dbxref=Genbank:YP_857946.1,GeneID:4487805;Name=YP_857946.1;Note=identified by match to protein family HMM PF06877;gbkey=CDS;product=hypothetical protein;protein_id=YP_857946.1;transl_table=11
NC_008570.1	RefSeq	gene	3891909	3894185	.	+	.	ID=gene3467;Dbxref=GeneID:4487806;Name=AHA_3471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3471
NC_008570.1	RefSeq	CDS	3891909	3894185	.	+	0	ID=cds3361;Parent=gene3467;Dbxref=Genbank:YP_857947.1,GeneID:4487806;Name=YP_857947.1;Note=identified by match to protein family HMM PF05547;gbkey=CDS;product=immune inhibitor A;protein_id=YP_857947.1;transl_table=11
NC_008570.1	RefSeq	gene	3894370	3894445	.	+	.	ID=gene3468;Dbxref=GeneID:4487807;Name=AHA_3472;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3472
NC_008570.1	RefSeq	tRNA	3894370	3894445	.	+	.	ID=rna103;Parent=gene3468;Dbxref=GeneID:4487807;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	exon	3894370	3894445	.	+	.	ID=id105;Parent=rna103;Dbxref=GeneID:4487807;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	gene	3894450	3894525	.	+	.	ID=gene3469;Dbxref=GeneID:4487808;Name=AHA_3473;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3473
NC_008570.1	RefSeq	tRNA	3894450	3894525	.	+	.	ID=rna104;Parent=gene3469;Dbxref=GeneID:4487808;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	exon	3894450	3894525	.	+	.	ID=id106;Parent=rna104;Dbxref=GeneID:4487808;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	gene	3894569	3894703	.	-	.	ID=gene3470;Dbxref=GeneID:4487809;Name=AHA_3474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3474
NC_008570.1	RefSeq	CDS	3894569	3894703	.	-	0	ID=cds3362;Parent=gene3470;Dbxref=Genbank:YP_857948.1,GeneID:4487809;Name=YP_857948.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857948.1;transl_table=11
NC_008570.1	RefSeq	gene	3894929	3896206	.	+	.	ID=gene3471;Dbxref=GeneID:4487810;Name=AHA_3475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3475
NC_008570.1	RefSeq	CDS	3894929	3896206	.	+	0	ID=cds3363;Parent=gene3471;Dbxref=Genbank:YP_857949.1,GeneID:4487810;Name=YP_857949.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=proline iminopeptidase;protein_id=YP_857949.1;transl_table=11
NC_008570.1	RefSeq	gene	3896306	3899866	.	+	.	ID=gene3472;Dbxref=GeneID:4487811;Name=AHA_3476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3476
NC_008570.1	RefSeq	CDS	3896306	3899866	.	+	0	ID=cds3364;Parent=gene3472;Dbxref=Genbank:YP_857950.1,GeneID:4487811;Name=YP_857950.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_857950.1;transl_table=11
NC_008570.1	RefSeq	gene	3899922	3900164	.	-	.	ID=gene3473;Dbxref=GeneID:4487812;Name=AHA_3477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3477
NC_008570.1	RefSeq	CDS	3899922	3900164	.	-	0	ID=cds3365;Parent=gene3473;Dbxref=Genbank:YP_857951.1,GeneID:4487812;Name=YP_857951.1;Note=identified by match to protein family HMM PF06004;gbkey=CDS;product=hypothetical protein;protein_id=YP_857951.1;transl_table=11
NC_008570.1	RefSeq	gene	3900246	3901421	.	-	.	ID=gene3474;Dbxref=GeneID:4487813;Name=AHA_3478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3478
NC_008570.1	RefSeq	CDS	3900246	3901421	.	-	0	ID=cds3366;Parent=gene3474;Dbxref=Genbank:YP_857952.1,GeneID:4487813;Name=YP_857952.1;Note=identified by match to protein family HMM PF00082;gbkey=CDS;product=extracellular alkaline serine protease;protein_id=YP_857952.1;transl_table=11
NC_008570.1	RefSeq	gene	3901541	3902833	.	-	.	ID=gene3475;Dbxref=GeneID:4487814;Name=AHA_3479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3479
NC_008570.1	RefSeq	CDS	3901541	3902833	.	-	0	ID=cds3367;Parent=gene3475;Dbxref=Genbank:YP_857953.1,GeneID:4487814;Name=YP_857953.1;gbkey=CDS;product=thiosulfate sulfurtransferase;protein_id=YP_857953.1;transl_table=11
NC_008570.1	RefSeq	gene	3902862	3903794	.	-	.	ID=gene3476;Dbxref=GeneID:4487815;Name=AHA_3480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3480
NC_008570.1	RefSeq	CDS	3902862	3903794	.	-	0	ID=cds3368;Parent=gene3476;Dbxref=Genbank:YP_857954.1,GeneID:4487815;Name=YP_857954.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=YP_857954.1;transl_table=11
NC_008570.1	RefSeq	gene	3903907	3904239	.	-	.	ID=gene3477;Dbxref=GeneID:4487816;Name=AHA_3481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3481
NC_008570.1	RefSeq	CDS	3903907	3904239	.	-	0	ID=cds3369;Parent=gene3477;Dbxref=Genbank:YP_857955.1,GeneID:4487816;Name=YP_857955.1;Note=identified by match to protein family HMM PF04320;gbkey=CDS;product=hypothetical protein;protein_id=YP_857955.1;transl_table=11
NC_008570.1	RefSeq	gene	3904254	3904949	.	-	.	ID=gene3478;Dbxref=GeneID:4487817;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AHA_3482
NC_008570.1	RefSeq	CDS	3904254	3904949	.	-	0	ID=cds3370;Parent=gene3478;Dbxref=Genbank:YP_857956.1,GeneID:4487817;Name=YP_857956.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=YP_857956.1;transl_table=11
NC_008570.1	RefSeq	gene	3905316	3906383	.	+	.	ID=gene3479;Dbxref=GeneID:4487818;Name=AHA_3483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3483
NC_008570.1	RefSeq	CDS	3905316	3906383	.	+	0	ID=cds3371;Parent=gene3479;Dbxref=Genbank:YP_857957.1,GeneID:4487818;Name=YP_857957.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF04389;gbkey=CDS;product=aminopeptidase;protein_id=YP_857957.1;transl_table=11
NC_008570.1	RefSeq	gene	3906566	3907747	.	+	.	ID=gene3480;Dbxref=GeneID:4487819;Name=AHA_3484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3484
NC_008570.1	RefSeq	CDS	3906566	3907747	.	+	0	ID=cds3372;Parent=gene3480;Dbxref=Genbank:YP_857958.1,GeneID:4487819;Name=YP_857958.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aminotransferase%2C classes I and II;protein_id=YP_857958.1;transl_table=11
NC_008570.1	RefSeq	gene	3907812	3909344	.	-	.	ID=gene3481;Dbxref=GeneID:4487820;Name=AHA_3485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3485
NC_008570.1	RefSeq	CDS	3907812	3909344	.	-	0	ID=cds3373;Parent=gene3481;Dbxref=Genbank:YP_857959.1,GeneID:4487820;Name=YP_857959.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_857959.1;transl_table=11
NC_008570.1	RefSeq	gene	3909647	3910552	.	+	.	ID=gene3482;Dbxref=GeneID:4490416;Name=AHA_3486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3486
NC_008570.1	RefSeq	CDS	3909647	3910552	.	+	0	ID=cds3374;Parent=gene3482;Dbxref=Genbank:YP_857960.1,GeneID:4490416;Name=YP_857960.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01777;gbkey=CDS;product=hypothetical protein;protein_id=YP_857960.1;transl_table=11
NC_008570.1	RefSeq	gene	3910646	3913093	.	-	.	ID=gene3483;Dbxref=GeneID:4490417;Name=AHA_3487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3487
NC_008570.1	RefSeq	CDS	3910646	3913093	.	-	0	ID=cds3375;Parent=gene3483;Dbxref=Genbank:YP_857961.1,GeneID:4490417;Name=YP_857961.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=ABC transporter permease;protein_id=YP_857961.1;transl_table=11
NC_008570.1	RefSeq	gene	3913090	3913815	.	-	.	ID=gene3484;Dbxref=GeneID:4490418;Name=AHA_3488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3488
NC_008570.1	RefSeq	CDS	3913090	3913815	.	-	0	ID=cds3376;Parent=gene3484;Dbxref=Genbank:YP_857962.1,GeneID:4490418;Name=YP_857962.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_857962.1;transl_table=11
NC_008570.1	RefSeq	gene	3913814	3914413	.	+	.	ID=gene3485;Dbxref=GeneID:4490419;Name=AHA_3489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3489
NC_008570.1	RefSeq	CDS	3913814	3914413	.	+	0	ID=cds3377;Parent=gene3485;Dbxref=Genbank:YP_857963.1,GeneID:4490419;Name=YP_857963.1;Note=identified by match to protein family HMM PF00657;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=YP_857963.1;transl_table=11
NC_008570.1	RefSeq	gene	3914497	3915441	.	-	.	ID=gene3486;Dbxref=GeneID:4490420;Name=AHA_3490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3490
NC_008570.1	RefSeq	CDS	3914497	3915441	.	-	0	ID=cds3378;Parent=gene3486;Dbxref=Genbank:YP_857964.1,GeneID:4490420;Name=YP_857964.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01584;gbkey=CDS;product=chemotaxis protein CheV;protein_id=YP_857964.1;transl_table=11
NC_008570.1	RefSeq	gene	3915737	3930880	.	-	.	ID=gene3487;Dbxref=GeneID:4490421;Name=AHA_3491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3491
NC_008570.1	RefSeq	CDS	3915737	3930880	.	-	0	ID=cds3379;Parent=gene3487;Dbxref=Genbank:YP_857965.1,GeneID:4490421;Name=YP_857965.1;Note=identified by match to protein family HMM PF00092%3B match to protein family HMM PF00353%3B match to protein family HMM TIGR01965;gbkey=CDS;product=hypothetical protein;protein_id=YP_857965.1;transl_table=11
NC_008570.1	RefSeq	gene	3931109	3932770	.	-	.	ID=gene3488;Dbxref=GeneID:4490422;Name=AHA_3492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3492
NC_008570.1	RefSeq	CDS	3931109	3932770	.	-	0	ID=cds3380;Parent=gene3488;Dbxref=Genbank:YP_857966.1,GeneID:4490422;Name=YP_857966.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF06826%3B match to protein family HMM TIGR01625;gbkey=CDS;product=hypothetical protein;protein_id=YP_857966.1;transl_table=11
NC_008570.1	RefSeq	gene	3932889	3933524	.	-	.	ID=gene3489;Dbxref=GeneID:4490423;Name=AHA_3493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3493
NC_008570.1	RefSeq	CDS	3932889	3933524	.	-	0	ID=cds3381;Parent=gene3489;Dbxref=Genbank:YP_857967.1,GeneID:4490423;Name=YP_857967.1;Note=identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065;gbkey=CDS;product=hemolysin III;protein_id=YP_857967.1;transl_table=11
NC_008570.1	RefSeq	gene	3933748	3935253	.	+	.	ID=gene3490;Dbxref=GeneID:4490424;Name=AHA_3494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3494
NC_008570.1	RefSeq	CDS	3933748	3935253	.	+	0	ID=cds3382;Parent=gene3490;Dbxref=Genbank:YP_857968.1,GeneID:4490424;Name=YP_857968.1;Note=identified by match to protein family HMM PF00282;gbkey=CDS;product=group II decarboxylase;protein_id=YP_857968.1;transl_table=11
NC_008570.1	RefSeq	gene	3935358	3935909	.	+	.	ID=gene3491;Dbxref=GeneID:4490425;Name=ispZ;gbkey=Gene;gene=ispZ;gene_biotype=protein_coding;locus_tag=AHA_3495
NC_008570.1	RefSeq	CDS	3935358	3935909	.	+	0	ID=cds3383;Parent=gene3491;Dbxref=Genbank:YP_857969.1,GeneID:4490425;Name=YP_857969.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;gene=ispZ;product=intracellular septation protein A;protein_id=YP_857969.1;transl_table=11
NC_008570.1	RefSeq	gene	3935935	3936231	.	+	.	ID=gene3492;Dbxref=GeneID:4490426;Name=AHA_3496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3496
NC_008570.1	RefSeq	CDS	3935935	3936231	.	+	0	ID=cds3384;Parent=gene3492;Dbxref=Genbank:YP_857970.1,GeneID:4490426;Name=YP_857970.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=YP_857970.1;transl_table=11
NC_008570.1	RefSeq	gene	3936313	3937104	.	-	.	ID=gene3493;Dbxref=GeneID:4490427;Name=cysQ-2;gbkey=Gene;gene=cysQ-2;gene_biotype=protein_coding;locus_tag=AHA_3497
NC_008570.1	RefSeq	CDS	3936313	3937104	.	-	0	ID=cds3385;Parent=gene3493;Dbxref=Genbank:YP_857971.1,GeneID:4490427;Name=YP_857971.1;Note=identified by match to protein family HMM PF00459%3B match to protein family HMM TIGR01331;gbkey=CDS;gene=cysQ-2;product=3'(2')%2C5'-bisphosphate nucleotidase;protein_id=YP_857971.1;transl_table=11
NC_008570.1	RefSeq	gene	3937251	3937571	.	+	.	ID=gene3494;Dbxref=GeneID:4490428;Name=AHA_3498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3498
NC_008570.1	RefSeq	CDS	3937251	3937571	.	+	0	ID=cds3386;Parent=gene3494;Dbxref=Genbank:YP_857972.1,GeneID:4490428;Name=YP_857972.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426;gbkey=CDS;product=ComEA protein;protein_id=YP_857972.1;transl_table=11
NC_008570.1	RefSeq	gene	3937685	3938578	.	+	.	ID=gene3495;Dbxref=GeneID:4490429;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AHA_3499
NC_008570.1	RefSeq	CDS	3937685	3938578	.	+	0	ID=cds3387;Parent=gene3495;Dbxref=Genbank:YP_857973.1,GeneID:4490429;Name=YP_857973.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099;gbkey=CDS;gene=galU;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_857973.1;transl_table=11
NC_008570.1	RefSeq	gene	3938792	3940189	.	+	.	ID=gene3496;Dbxref=GeneID:4490430;Name=AHA_3500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3500
NC_008570.1	RefSeq	CDS	3938792	3940189	.	+	0	ID=cds3388;Parent=gene3496;Dbxref=Genbank:YP_857974.1,GeneID:4490430;Name=YP_857974.1;Note=identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924;gbkey=CDS;product=dipeptide/tripeptide permease;protein_id=YP_857974.1;transl_table=11
NC_008570.1	RefSeq	gene	3940263	3941234	.	-	.	ID=gene3497;Dbxref=GeneID:4490431;Name=AHA_3501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3501
NC_008570.1	RefSeq	CDS	3940263	3941234	.	-	0	ID=cds3389;Parent=gene3497;Dbxref=Genbank:YP_857975.1,GeneID:4490431;Name=YP_857975.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=response regulator receiver domain-containing protein;protein_id=YP_857975.1;transl_table=11
NC_008570.1	RefSeq	gene	3941560	3943155	.	-	.	ID=gene3498;Dbxref=GeneID:4490432;Name=AHA_3502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3502
NC_008570.1	RefSeq	CDS	3941560	3943155	.	-	0	ID=cds3390;Parent=gene3498;Dbxref=Genbank:YP_857976.1,GeneID:4490432;Name=YP_857976.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857976.1;transl_table=11
NC_008570.1	RefSeq	gene	3941575	3942252	.	+	.	ID=gene3499;Dbxref=GeneID:4490433;Name=AHA_3503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3503
NC_008570.1	RefSeq	CDS	3941575	3942252	.	+	0	ID=cds3391;Parent=gene3499;Dbxref=Genbank:YP_857977.1,GeneID:4490433;Name=YP_857977.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857977.1;transl_table=11
NC_008570.1	RefSeq	gene	3942322	3943176	.	+	.	ID=gene3500;Dbxref=GeneID:4490434;Name=AHA_3504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3504
NC_008570.1	RefSeq	CDS	3942322	3943176	.	+	0	ID=cds3392;Parent=gene3500;Dbxref=Genbank:YP_857978.1,GeneID:4490434;Name=YP_857978.1;gbkey=CDS;product=DNA replication protein;protein_id=YP_857978.1;transl_table=11
NC_008570.1	RefSeq	gene	3943305	3943940	.	+	.	ID=gene3501;Dbxref=GeneID:4490435;Name=AHA_3505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3505
NC_008570.1	RefSeq	CDS	3943305	3943940	.	+	0	ID=cds3393;Parent=gene3501;Dbxref=Genbank:YP_857979.1,GeneID:4490435;Name=YP_857979.1;Note=identified by match to protein family HMM PF01370;gbkey=CDS;product=NAD-dependent epimerase/dehydratase family protein;protein_id=YP_857979.1;transl_table=11
NC_008570.1	RefSeq	gene	3944051	3945247	.	-	.	ID=gene3502;Dbxref=GeneID:4488482;Name=AHA_3506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3506
NC_008570.1	RefSeq	CDS	3944051	3945247	.	-	0	ID=cds3394;Parent=gene3502;Dbxref=Genbank:YP_857980.1,GeneID:4488482;Name=YP_857980.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_857980.1;transl_table=11
NC_008570.1	RefSeq	gene	3945351	3946487	.	-	.	ID=gene3503;Dbxref=GeneID:4488483;Name=AHA_3507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3507
NC_008570.1	RefSeq	CDS	3945351	3946487	.	-	0	ID=cds3395;Parent=gene3503;Dbxref=Genbank:YP_857981.1,GeneID:4488483;Name=YP_857981.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=YP_857981.1;transl_table=11
NC_008570.1	RefSeq	gene	3946487	3947491	.	-	.	ID=gene3504;Dbxref=GeneID:4488484;Name=AHA_3508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3508
NC_008570.1	RefSeq	CDS	3946487	3947491	.	-	0	ID=cds3396;Parent=gene3504;Dbxref=Genbank:YP_857982.1,GeneID:4488484;Name=YP_857982.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=membrane-fusion protein;protein_id=YP_857982.1;transl_table=11
NC_008570.1	RefSeq	gene	3947565	3948923	.	-	.	ID=gene3505;Dbxref=GeneID:4488485;Name=AHA_3509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3509
NC_008570.1	RefSeq	CDS	3947565	3948923	.	-	0	ID=cds3397;Parent=gene3505;Dbxref=Genbank:YP_857983.1,GeneID:4488485;Name=YP_857983.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;product=outer membrane efflux protein;protein_id=YP_857983.1;transl_table=11
NC_008570.1	RefSeq	gene	3949262	3950227	.	+	.	ID=gene3506;Dbxref=GeneID:4488486;Name=AHA_3510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3510
NC_008570.1	RefSeq	CDS	3949262	3950227	.	+	0	ID=cds3398;Parent=gene3506;Dbxref=Genbank:YP_857984.1,GeneID:4488486;Name=YP_857984.1;Note=identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=YP_857984.1;transl_table=11
NC_008570.1	RefSeq	gene	3950253	3950549	.	+	.	ID=gene3507;Dbxref=GeneID:4488487;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AHA_3511
NC_008570.1	RefSeq	CDS	3950253	3950549	.	+	0	ID=cds3399;Parent=gene3507;Dbxref=Genbank:YP_857985.1,GeneID:4488487;Name=YP_857985.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=DNA-binding protein Fis;protein_id=YP_857985.1;transl_table=11
NC_008570.1	RefSeq	gene	3950619	3951251	.	-	.	ID=gene3508;Dbxref=GeneID:4488488;Name=AHA_3512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3512
NC_008570.1	RefSeq	CDS	3950619	3951251	.	-	0	ID=cds3400;Parent=gene3508;Dbxref=Genbank:YP_857986.1,GeneID:4488488;Name=YP_857986.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_857986.1;transl_table=11
NC_008570.1	RefSeq	gene	3951574	3951693	.	-	.	ID=gene3509;Dbxref=GeneID:4488489;Name=rrfG;gbkey=Gene;gene=rrfG;gene_biotype=rRNA;locus_tag=AHA_3513
NC_008570.1	RefSeq	rRNA	3951574	3951693	.	-	.	ID=rna105;Parent=gene3509;Dbxref=GeneID:4488489;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	3951574	3951693	.	-	.	ID=id107;Parent=rna105;Dbxref=GeneID:4488489;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	3951808	3954696	.	-	.	ID=gene3510;Dbxref=GeneID:4488490;Name=rrlG;gbkey=Gene;gene=rrlG;gene_biotype=rRNA;locus_tag=AHA_3514
NC_008570.1	RefSeq	rRNA	3951808	3954696	.	-	.	ID=rna106;Parent=gene3510;Dbxref=GeneID:4488490;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	3951808	3954696	.	-	.	ID=id108;Parent=rna106;Dbxref=GeneID:4488490;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	3954933	3955008	.	-	.	ID=gene3511;Dbxref=GeneID:4488491;Name=AHA_3515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3515
NC_008570.1	RefSeq	tRNA	3954933	3955008	.	-	.	ID=rna107;Parent=gene3511;Dbxref=GeneID:4488491;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	3954933	3955008	.	-	.	ID=id109;Parent=rna107;Dbxref=GeneID:4488491;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	3955208	3956757	.	-	.	ID=gene3512;Dbxref=GeneID:4488492;Name=rrsG;gbkey=Gene;gene=rrsG;gene_biotype=rRNA;locus_tag=AHA_3516
NC_008570.1	RefSeq	rRNA	3955208	3956757	.	-	.	ID=rna108;Parent=gene3512;Dbxref=GeneID:4488492;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	3955208	3956757	.	-	.	ID=id110;Parent=rna108;Dbxref=GeneID:4488492;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	3957236	3957640	.	-	.	ID=gene3513;Dbxref=GeneID:4488493;Name=AHA_3517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3517
NC_008570.1	RefSeq	CDS	3957236	3957640	.	-	0	ID=cds3401;Parent=gene3513;Dbxref=Genbank:YP_857987.1,GeneID:4488493;Name=YP_857987.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=YP_857987.1;transl_table=11
NC_008570.1	RefSeq	gene	3957677	3958372	.	-	.	ID=gene3514;Dbxref=GeneID:4488494;Name=AHA_3518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3518
NC_008570.1	RefSeq	CDS	3957677	3958372	.	-	0	ID=cds3402;Parent=gene3514;Dbxref=Genbank:YP_857988.1,GeneID:4488494;Name=YP_857988.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857988.1;transl_table=11
NC_008570.1	RefSeq	gene	3958459	3959853	.	-	.	ID=gene3515;Dbxref=GeneID:4488495;Name=AHA_3519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3519
NC_008570.1	RefSeq	CDS	3958459	3959853	.	-	0	ID=cds3403;Parent=gene3515;Dbxref=Genbank:YP_857989.1,GeneID:4488495;Name=YP_857989.1;Note=Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation;gbkey=CDS;product=chloride channel protein;protein_id=YP_857989.1;transl_table=11
NC_008570.1	RefSeq	gene	3960076	3961362	.	+	.	ID=gene3516;Dbxref=GeneID:4488496;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AHA_3520
NC_008570.1	RefSeq	CDS	3960076	3961362	.	+	0	ID=cds3404;Parent=gene3516;Dbxref=Genbank:YP_857990.1,GeneID:4488496;Name=YP_857990.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde aminotransferase;protein_id=YP_857990.1;transl_table=11
NC_008570.1	RefSeq	gene	3961572	3962387	.	+	.	ID=gene3517;Dbxref=GeneID:4488497;Name=AHA_3521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3521
NC_008570.1	RefSeq	CDS	3961572	3962387	.	+	0	ID=cds3405;Parent=gene3517;Dbxref=Genbank:YP_857991.1,GeneID:4488497;Name=YP_857991.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857991.1;transl_table=11
NC_008570.1	RefSeq	gene	3962448	3963350	.	-	.	ID=gene3518;Dbxref=GeneID:4488498;Name=AHA_3522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3522
NC_008570.1	RefSeq	CDS	3962448	3963350	.	-	0	ID=cds3406;Parent=gene3518;Dbxref=Genbank:YP_857992.1,GeneID:4488498;Name=YP_857992.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857992.1;transl_table=11
NC_008570.1	RefSeq	gene	3963607	3964329	.	-	.	ID=gene3519;Dbxref=GeneID:4488499;Name=AHA_3523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3523
NC_008570.1	RefSeq	CDS	3963607	3964329	.	-	0	ID=cds3407;Parent=gene3519;Dbxref=Genbank:YP_857993.1,GeneID:4488499;Name=YP_857993.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;product=PAP2 family protein;protein_id=YP_857993.1;transl_table=11
NC_008570.1	RefSeq	gene	3964517	3965032	.	+	.	ID=gene3520;Dbxref=GeneID:4488500;Name=AHA_3524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3524
NC_008570.1	RefSeq	CDS	3964517	3965032	.	+	0	ID=cds3408;Parent=gene3520;Dbxref=Genbank:YP_857994.1,GeneID:4488500;Name=YP_857994.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_857994.1;transl_table=11
NC_008570.1	RefSeq	gene	3965108	3966688	.	-	.	ID=gene3521;Dbxref=GeneID:4488697;Name=AHA_3525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3525
NC_008570.1	RefSeq	CDS	3965108	3966688	.	-	0	ID=cds3409;Parent=gene3521;Dbxref=Genbank:YP_857995.1,GeneID:4488697;Name=YP_857995.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=response regulator;protein_id=YP_857995.1;transl_table=11
NC_008570.1	RefSeq	gene	3966803	3967684	.	-	.	ID=gene3522;Dbxref=GeneID:4488698;Name=AHA_3526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3526
NC_008570.1	RefSeq	CDS	3966803	3967684	.	-	0	ID=cds3410;Parent=gene3522;Dbxref=Genbank:YP_857996.1,GeneID:4488698;Name=YP_857996.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_857996.1;transl_table=11
NC_008570.1	RefSeq	gene	3967841	3968305	.	+	.	ID=gene3523;Dbxref=GeneID:4488699;Name=AHA_3527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3527
NC_008570.1	RefSeq	CDS	3967841	3968305	.	+	0	ID=cds3411;Parent=gene3523;Dbxref=Genbank:YP_857997.1,GeneID:4488699;Name=YP_857997.1;Note=identified by match to protein family HMM PF00893;gbkey=CDS;product=SMR family multidrug efflux pump;protein_id=YP_857997.1;transl_table=11
NC_008570.1	RefSeq	gene	3968293	3968613	.	+	.	ID=gene3524;Dbxref=GeneID:4488700;Name=AHA_3528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3528
NC_008570.1	RefSeq	CDS	3968293	3968613	.	+	0	ID=cds3412;Parent=gene3524;Dbxref=Genbank:YP_857998.1,GeneID:4488700;Name=YP_857998.1;Note=identified by match to protein family HMM PF00893;gbkey=CDS;product=SMR family multidrug efflux pump;protein_id=YP_857998.1;transl_table=11
NC_008570.1	RefSeq	gene	3968713	3969114	.	-	.	ID=gene3525;Dbxref=GeneID:4488701;Name=AHA_3529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3529
NC_008570.1	RefSeq	CDS	3968713	3969114	.	-	0	ID=cds3413;Parent=gene3525;Dbxref=Genbank:YP_857999.1,GeneID:4488701;Name=YP_857999.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxylase;protein_id=YP_857999.1;transl_table=11
NC_008570.1	RefSeq	gene	3969157	3971478	.	-	.	ID=gene3526;Dbxref=GeneID:4488702;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AHA_3530
NC_008570.1	RefSeq	CDS	3969157	3971478	.	-	0	ID=cds3414;Parent=gene3526;Dbxref=Genbank:YP_858000.1,GeneID:4488702;Name=YP_858000.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02071;gbkey=CDS;gene=mrcB;product=penicillin-binding protein 1B;protein_id=YP_858000.1;transl_table=11
NC_008570.1	RefSeq	gene	3971730	3974900	.	-	.	ID=gene3527;Dbxref=GeneID:4488703;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AHA_3531
NC_008570.1	RefSeq	CDS	3971730	3974900	.	-	0	ID=cds3415;Parent=gene3527;Dbxref=Genbank:YP_858001.1,GeneID:4488703;Name=YP_858001.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04408%3B match to protein family HMM TIGR01970;gbkey=CDS;gene=hrpB;product=ATP-dependent helicase HrpB;protein_id=YP_858001.1;transl_table=11
NC_008570.1	RefSeq	gene	3974322	3974861	.	+	.	ID=gene3528;Dbxref=GeneID:4488704;Name=AHA_3532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3532
NC_008570.1	RefSeq	CDS	3974322	3974861	.	+	0	ID=cds3416;Parent=gene3528;Dbxref=Genbank:YP_858002.1,GeneID:4488704;Name=YP_858002.1;Note=identified by match to protein family HMM PF02834%3B match to protein family HMM TIGR02258;gbkey=CDS;product=2'-5' RNA ligase;protein_id=YP_858002.1;transl_table=11
NC_008570.1	RefSeq	gene	3974904	3975647	.	+	.	ID=gene3529;Dbxref=GeneID:4488705;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AHA_3533
NC_008570.1	RefSeq	CDS	3974904	3975647	.	+	0	ID=cds3417;Parent=gene3529;Dbxref=Genbank:YP_858003.1,GeneID:4488705;Name=YP_858003.1;Note=Regulatory factor involved in maltose metabolism;gbkey=CDS;gene=sfsA;product=sugar fermentation stimulation protein A;protein_id=YP_858003.1;transl_table=11
NC_008570.1	RefSeq	gene	3975767	3976216	.	+	.	ID=gene3530;Dbxref=GeneID:4488706;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AHA_3534
NC_008570.1	RefSeq	CDS	3975767	3976216	.	+	0	ID=cds3418;Parent=gene3530;Dbxref=Genbank:YP_858004.1,GeneID:4488706;Name=YP_858004.1;Note=identified by match to protein family HMM PF01258%3B match to protein family HMM TIGR02420;gbkey=CDS;gene=dksA;product=RNA polymerase-binding protein DksA;protein_id=YP_858004.1;transl_table=11
NC_008570.1	RefSeq	gene	3976336	3977238	.	+	.	ID=gene3531;Dbxref=GeneID:4488707;Name=AHA_3535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3535
NC_008570.1	RefSeq	CDS	3976336	3977238	.	+	0	ID=cds3419;Parent=gene3531;Dbxref=Genbank:YP_858005.1,GeneID:4488707;Name=YP_858005.1;Note=identified by match to protein family HMM PF00749;gbkey=CDS;product=glutamyl-Q tRNA(Asp) synthetase;protein_id=YP_858005.1;transl_table=11
NC_008570.1	RefSeq	gene	3977560	3979059	.	+	.	ID=gene3532;Dbxref=GeneID:4488708;Name=AHA_3536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3536
NC_008570.1	RefSeq	CDS	3977560	3979059	.	+	0	ID=cds3420;Parent=gene3532;Dbxref=Genbank:YP_858006.1,GeneID:4488708;Name=YP_858006.1;Note=identified by match to protein family HMM PF01743%3B match to protein family HMM TIGR01942;gbkey=CDS;product=poly(A) polymerase;protein_id=YP_858006.1;transl_table=11
NC_008570.1	RefSeq	gene	3979071	3979580	.	+	.	ID=gene3533;Dbxref=GeneID:4488709;Name=folK-1;gbkey=Gene;gene=folK-1;gene_biotype=protein_coding;locus_tag=AHA_3537
NC_008570.1	RefSeq	CDS	3979071	3979580	.	+	0	ID=cds3421;Parent=gene3533;Dbxref=Genbank:YP_858007.1,GeneID:4488709;Name=YP_858007.1;Note=identified by similarity to SP:P26281%3B match to protein family HMM PF01288%3B match to protein family HMM TIGR01498;gbkey=CDS;gene=folK-1;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_858007.1;transl_table=11
NC_008570.1	RefSeq	gene	3979577	3980371	.	+	.	ID=gene3534;Dbxref=GeneID:4488710;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AHA_3538
NC_008570.1	RefSeq	CDS	3979577	3980371	.	+	0	ID=cds3422;Parent=gene3534;Dbxref=Genbank:YP_858008.1,GeneID:4488710;Name=YP_858008.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=YP_858008.1;transl_table=11
NC_008570.1	RefSeq	gene	3980559	3981416	.	+	.	ID=gene3535;Dbxref=GeneID:4488711;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AHA_3539
NC_008570.1	RefSeq	CDS	3980559	3981416	.	+	0	ID=cds3423;Parent=gene3535;Dbxref=Genbank:YP_858009.1,GeneID:4488711;Name=YP_858009.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=YP_858009.1;transl_table=11
NC_008570.1	RefSeq	gene	3981481	3982008	.	-	.	ID=gene3536;Dbxref=GeneID:4488712;Name=AHA_3540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3540
NC_008570.1	RefSeq	CDS	3981481	3982008	.	-	0	ID=cds3424;Parent=gene3536;Dbxref=Genbank:YP_858010.1,GeneID:4488712;Name=YP_858010.1;Note=identified by match to protein family HMM PF00581;gbkey=CDS;product=hypothetical protein;protein_id=YP_858010.1;transl_table=11
NC_008570.1	RefSeq	gene	3982010	3982450	.	-	.	ID=gene3537;Dbxref=GeneID:4488713;Name=AHA_3541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3541
NC_008570.1	RefSeq	CDS	3982010	3982450	.	-	0	ID=cds3425;Parent=gene3537;Dbxref=Genbank:YP_858011.1,GeneID:4488713;Name=YP_858011.1;gbkey=CDS;product=methylamine utilization protein-like protein;protein_id=YP_858011.1;transl_table=11
NC_008570.1	RefSeq	gene	3982752	3983534	.	-	.	ID=gene3538;Dbxref=GeneID:4488714;Name=AHA_3542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3542
NC_008570.1	RefSeq	CDS	3982752	3983534	.	-	0	ID=cds3426;Parent=gene3538;Dbxref=Genbank:YP_858012.1,GeneID:4488714;Name=YP_858012.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;product=activator of (R)-2-hydroxyglutaryl-CoA dehydratase;protein_id=YP_858012.1;transl_table=11
NC_008570.1	RefSeq	gene	3983544	3984620	.	-	.	ID=gene3539;Dbxref=GeneID:4488715;Name=AHA_3543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3543
NC_008570.1	RefSeq	CDS	3983544	3984620	.	-	0	ID=cds3427;Parent=gene3539;Dbxref=Genbank:YP_858013.1,GeneID:4488715;Name=YP_858013.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;product=2-hydroxyglutaryl-CoA dehydratase subunit D;protein_id=YP_858013.1;transl_table=11
NC_008570.1	RefSeq	gene	3984930	3985703	.	-	.	ID=gene3540;Dbxref=GeneID:4488716;Name=AHA_3544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3544
NC_008570.1	RefSeq	CDS	3984930	3985703	.	-	0	ID=cds3428;Parent=gene3540;Dbxref=Genbank:YP_858014.1,GeneID:4488716;Name=YP_858014.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858014.1;transl_table=11
NC_008570.1	RefSeq	gene	3985700	3986617	.	-	.	ID=gene3541;Dbxref=GeneID:4489503;Name=AHA_3545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3545
NC_008570.1	RefSeq	CDS	3985700	3986617	.	-	0	ID=cds3429;Parent=gene3541;Dbxref=Genbank:YP_858015.1,GeneID:4489503;Name=YP_858015.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858015.1;transl_table=11
NC_008570.1	RefSeq	gene	3986729	3987259	.	-	.	ID=gene3542;Dbxref=GeneID:4489504;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AHA_3546
NC_008570.1	RefSeq	CDS	3986729	3987259	.	-	0	ID=cds3430;Parent=gene3542;Dbxref=Genbank:YP_858016.1,GeneID:4489504;Name=YP_858016.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203;gbkey=CDS;gene=hpt;product=hypoxanthine phosphoribosyltransferase;protein_id=YP_858016.1;transl_table=11
NC_008570.1	RefSeq	gene	3987460	3988074	.	+	.	ID=gene3543;Dbxref=GeneID:4489505;Name=AHA_3547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3547
NC_008570.1	RefSeq	CDS	3987460	3988074	.	+	0	ID=cds3431;Parent=gene3543;Dbxref=Genbank:YP_858017.1,GeneID:4489505;Name=YP_858017.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=LitR%2C transcriptional regulator;protein_id=YP_858017.1;transl_table=11
NC_008570.1	RefSeq	gene	3988149	3988760	.	-	.	ID=gene3544;Dbxref=GeneID:4489506;Name=AHA_3548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3548
NC_008570.1	RefSeq	CDS	3988149	3988760	.	-	0	ID=cds3432;Parent=gene3544;Dbxref=Genbank:YP_858018.1,GeneID:4489506;Name=YP_858018.1;Note=identified by match to protein family HMM PF02441%3B match to protein family HMM TIGR00421;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_858018.1;transl_table=11
NC_008570.1	RefSeq	gene	3988757	3990127	.	-	.	ID=gene3545;Dbxref=GeneID:4489507;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AHA_3549
NC_008570.1	RefSeq	CDS	3988757	3990127	.	-	0	ID=cds3433;Parent=gene3545;Dbxref=Genbank:YP_858019.1,GeneID:4489507;Name=YP_858019.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01081;gbkey=CDS;gene=mpl;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=YP_858019.1;transl_table=11
NC_008570.1	RefSeq	gene	3990306	3990836	.	+	.	ID=gene3546;Dbxref=GeneID:4489508;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AHA_3550
NC_008570.1	RefSeq	CDS	3990306	3990836	.	+	0	ID=cds3434;Parent=gene3546;Dbxref=Genbank:YP_858020.1,GeneID:4489508;Name=YP_858020.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=YP_858020.1;transl_table=11
NC_008570.1	RefSeq	gene	3990862	3991170	.	-	.	ID=gene3547;Dbxref=GeneID:4489509;Name=AHA_3551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3551
NC_008570.1	RefSeq	CDS	3990862	3991170	.	-	0	ID=cds3435;Parent=gene3547;Dbxref=Genbank:YP_858021.1,GeneID:4489509;Name=YP_858021.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858021.1;transl_table=11
NC_008570.1	RefSeq	gene	3991145	3991243	.	+	.	ID=gene3548;Dbxref=GeneID:4489510;Name=AHA_3552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3552
NC_008570.1	RefSeq	CDS	3991145	3991243	.	+	0	ID=cds3436;Parent=gene3548;Dbxref=Genbank:YP_858022.1,GeneID:4489510;Name=YP_858022.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858022.1;transl_table=11
NC_008570.1	RefSeq	gene	3991349	3992227	.	+	.	ID=gene3549;Dbxref=GeneID:4489511;Name=AHA_3553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3553
NC_008570.1	RefSeq	CDS	3991349	3992227	.	+	0	ID=cds3437;Parent=gene3549;Dbxref=Genbank:YP_858023.1,GeneID:4489511;Name=YP_858023.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858023.1;transl_table=11
NC_008570.1	RefSeq	gene	3992485	3993027	.	+	.	ID=gene3550;Dbxref=GeneID:4489512;Name=AHA_3554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3554
NC_008570.1	RefSeq	CDS	3992485	3993027	.	+	0	ID=cds3438;Parent=gene3550;Dbxref=Genbank:YP_858024.1,GeneID:4489512;Name=YP_858024.1;Note=identified by match to protein family HMM TIGR01626;gbkey=CDS;product=hypothetical protein;protein_id=YP_858024.1;transl_table=11
NC_008570.1	RefSeq	gene	3993072	3993362	.	+	.	ID=gene3551;Dbxref=GeneID:4489513;Name=AHA_3555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3555
NC_008570.1	RefSeq	CDS	3993072	3993362	.	+	0	ID=cds3439;Parent=gene3551;Dbxref=Genbank:YP_858025.1,GeneID:4489513;Name=YP_858025.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858025.1;transl_table=11
NC_008570.1	RefSeq	gene	3993398	3993964	.	+	.	ID=gene3552;Dbxref=GeneID:4489514;Name=AHA_3556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3556
NC_008570.1	RefSeq	CDS	3993398	3993964	.	+	0	ID=cds3440;Parent=gene3552;Dbxref=Genbank:YP_858026.1,GeneID:4489514;Name=YP_858026.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858026.1;transl_table=11
NC_008570.1	RefSeq	gene	3993969	3994658	.	+	.	ID=gene3553;Dbxref=GeneID:4489515;Name=AHA_3557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3557
NC_008570.1	RefSeq	CDS	3993969	3994658	.	+	0	ID=cds3441;Parent=gene3553;Dbxref=Genbank:YP_858027.1,GeneID:4489515;Name=YP_858027.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858027.1;transl_table=11
NC_008570.1	RefSeq	gene	3994652	3995899	.	+	.	ID=gene3554;Dbxref=GeneID:4489516;Name=AHA_3558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3558
NC_008570.1	RefSeq	CDS	3994652	3995899	.	+	0	ID=cds3442;Parent=gene3554;Dbxref=Genbank:YP_858028.1,GeneID:4489516;Name=YP_858028.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_858028.1;transl_table=11
NC_008570.1	RefSeq	gene	3995929	3996408	.	+	.	ID=gene3555;Dbxref=GeneID:4489517;Name=AHA_3559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3559
NC_008570.1	RefSeq	CDS	3995929	3996408	.	+	0	ID=cds3443;Parent=gene3555;Dbxref=Genbank:YP_858029.1,GeneID:4489517;Name=YP_858029.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858029.1;transl_table=11
NC_008570.1	RefSeq	gene	3996641	3997414	.	+	.	ID=gene3556;Dbxref=GeneID:4489518;Name=AHA_3560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3560
NC_008570.1	RefSeq	CDS	3996641	3997414	.	+	0	ID=cds3444;Parent=gene3556;Dbxref=Genbank:YP_858030.1,GeneID:4489518;Name=YP_858030.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858030.1;transl_table=11
NC_008570.1	RefSeq	gene	3997678	3999306	.	+	.	ID=gene3557;Dbxref=GeneID:4489519;Name=AHA_3561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3561
NC_008570.1	RefSeq	CDS	3997678	3999306	.	+	0	ID=cds3445;Parent=gene3557;Dbxref=Genbank:YP_858031.1,GeneID:4489519;Name=YP_858031.1;Note=identified by similarity to GB:AAD22405.1%3B match to protein family HMM PF00015%3B match to protein family HMM TIGR00229;gbkey=CDS;product=aerotaxis receptor Aer;protein_id=YP_858031.1;transl_table=11
NC_008570.1	RefSeq	gene	4000360	4001250	.	+	.	ID=gene3558;Dbxref=GeneID:4489520;Name=AHA_3562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3562
NC_008570.1	RefSeq	CDS	4000360	4001250	.	+	0	ID=cds3446;Parent=gene3558;Dbxref=Genbank:YP_858032.1,GeneID:4489520;Name=YP_858032.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=YP_858032.1;transl_table=11
NC_008570.1	RefSeq	gene	4001682	4003133	.	+	.	ID=gene3559;Dbxref=GeneID:4489521;Name=AHA_3563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3563
NC_008570.1	RefSeq	CDS	4001682	4003133	.	+	0	ID=cds3447;Parent=gene3559;Dbxref=Genbank:YP_858033.1,GeneID:4489521;Name=YP_858033.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858033.1;transl_table=11
NC_008570.1	RefSeq	gene	4003214	4003807	.	-	.	ID=gene3560;Dbxref=GeneID:4488259;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AHA_3564
NC_008570.1	RefSeq	CDS	4003214	4003807	.	-	0	ID=cds3448;Parent=gene3560;Dbxref=Genbank:YP_858034.1,GeneID:4488259;Name=YP_858034.1;Note=identified by match to protein family HMM PF01583%3B match to protein family HMM TIGR00455;gbkey=CDS;gene=cysC;product=adenylylsulfate kinase;protein_id=YP_858034.1;transl_table=11
NC_008570.1	RefSeq	gene	4003954	4005678	.	-	.	ID=gene3561;Dbxref=GeneID:4488260;Name=AHA_3565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3565
NC_008570.1	RefSeq	CDS	4003954	4005678	.	-	0	ID=cds3449;Parent=gene3561;Dbxref=Genbank:YP_858035.1,GeneID:4488260;Name=YP_858035.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF03600;gbkey=CDS;product=divalent anion:sodium symporter family protein;protein_id=YP_858035.1;transl_table=11
NC_008570.1	RefSeq	gene	4005683	4007110	.	-	.	ID=gene3562;Dbxref=GeneID:4488261;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AHA_3566
NC_008570.1	RefSeq	CDS	4005683	4007110	.	-	0	ID=cds3450;Parent=gene3562;Dbxref=Genbank:YP_858036.1,GeneID:4488261;Name=YP_858036.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase;protein_id=YP_858036.1;transl_table=11
NC_008570.1	RefSeq	gene	4007135	4008043	.	-	.	ID=gene3563;Dbxref=GeneID:4488262;Name=AHA_3567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3567
NC_008570.1	RefSeq	CDS	4007135	4008043	.	-	0	ID=cds3451;Parent=gene3563;Dbxref=Genbank:YP_858037.1,GeneID:4488262;Name=YP_858037.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase;protein_id=YP_858037.1;transl_table=11
NC_008570.1	RefSeq	gene	4008152	4009564	.	-	.	ID=gene3564;Dbxref=GeneID:4488263;Name=AHA_3568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3568
NC_008570.1	RefSeq	CDS	4008152	4009564	.	-	0	ID=cds3452;Parent=gene3564;Dbxref=Genbank:YP_858038.1,GeneID:4488263;Name=YP_858038.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469%3B match to protein family HMM TIGR01470;gbkey=CDS;product=siroheme synthase;protein_id=YP_858038.1;transl_table=11
NC_008570.1	RefSeq	gene	4009762	4010682	.	+	.	ID=gene3565;Dbxref=GeneID:4488264;Name=AHA_3569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3569
NC_008570.1	RefSeq	CDS	4009762	4010682	.	+	0	ID=cds3453;Parent=gene3565;Dbxref=Genbank:YP_858039.1,GeneID:4488264;Name=YP_858039.1;Note=identified by match to protein family HMM PF01145;gbkey=CDS;product=membrane protease subunit;protein_id=YP_858039.1;transl_table=11
NC_008570.1	RefSeq	gene	4010679	4011134	.	+	.	ID=gene3566;Dbxref=GeneID:4488265;Name=AHA_3570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3570
NC_008570.1	RefSeq	CDS	4010679	4011134	.	+	0	ID=cds3454;Parent=gene3566;Dbxref=Genbank:YP_858040.1,GeneID:4488265;Name=YP_858040.1;Note=identified by match to protein family HMM PF01957;gbkey=CDS;product=nodulation efficiency family protein;protein_id=YP_858040.1;transl_table=11
NC_008570.1	RefSeq	gene	4011217	4011627	.	-	.	ID=gene3567;Dbxref=GeneID:4488266;Name=AHA_3571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3571
NC_008570.1	RefSeq	CDS	4011217	4011627	.	-	0	ID=cds3455;Parent=gene3567;Dbxref=Genbank:YP_858041.1,GeneID:4488266;Name=YP_858041.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=YP_858041.1;transl_table=11
NC_008570.1	RefSeq	gene	4011781	4013691	.	+	.	ID=gene3568;Dbxref=GeneID:4488267;Name=AHA_3572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3572
NC_008570.1	RefSeq	CDS	4011781	4013691	.	+	0	ID=cds3456;Parent=gene3568;Dbxref=Genbank:YP_858042.1,GeneID:4488267;Name=YP_858042.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858042.1;transl_table=11
NC_008570.1	RefSeq	gene	4013702	4014145	.	+	.	ID=gene3569;Dbxref=GeneID:4488268;Name=AHA_3573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3573
NC_008570.1	RefSeq	CDS	4013702	4014145	.	+	0	ID=cds3457;Parent=gene3569;Dbxref=Genbank:YP_858043.1,GeneID:4488268;Name=YP_858043.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858043.1;transl_table=11
NC_008570.1	RefSeq	gene	4014139	4014993	.	+	.	ID=gene3570;Dbxref=GeneID:4488269;Name=AHA_3574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3574
NC_008570.1	RefSeq	CDS	4014139	4014993	.	+	0	ID=cds3458;Parent=gene3570;Dbxref=Genbank:YP_858044.1,GeneID:4488269;Name=YP_858044.1;Note=identified by match to protein family HMM PF04378;gbkey=CDS;product=protein involved in external DNA uptake;protein_id=YP_858044.1;transl_table=11
NC_008570.1	RefSeq	gene	4015044	4015973	.	-	.	ID=gene3571;Dbxref=GeneID:4488270;Name=AHA_3575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3575
NC_008570.1	RefSeq	CDS	4015044	4015973	.	-	0	ID=cds3459;Parent=gene3571;Dbxref=Genbank:YP_858045.1,GeneID:4488270;Name=YP_858045.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator;protein_id=YP_858045.1;transl_table=11
NC_008570.1	RefSeq	gene	4016083	4016682	.	+	.	ID=gene3572;Dbxref=GeneID:4488271;Name=AHA_3576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3576
NC_008570.1	RefSeq	CDS	4016083	4016682	.	+	0	ID=cds3460;Parent=gene3572;Dbxref=Genbank:YP_858046.1,GeneID:4488271;Name=YP_858046.1;Note=identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358;gbkey=CDS;product=ACP phosphodieterase;protein_id=YP_858046.1;transl_table=11
NC_008570.1	RefSeq	gene	4016779	4017054	.	-	.	ID=gene3573;Dbxref=GeneID:4488272;Name=AHA_3577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3577
NC_008570.1	RefSeq	CDS	4016779	4017054	.	-	0	ID=cds3461;Parent=gene3573;Dbxref=Genbank:YP_858047.1,GeneID:4488272;Name=YP_858047.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858047.1;transl_table=11
NC_008570.1	RefSeq	gene	4017172	4017534	.	+	.	ID=gene3574;Dbxref=GeneID:4488273;Name=AHA_3578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3578
NC_008570.1	RefSeq	CDS	4017172	4017534	.	+	0	ID=cds3462;Parent=gene3574;Dbxref=Genbank:YP_858048.1,GeneID:4488273;Name=YP_858048.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858048.1;transl_table=11
NC_008570.1	RefSeq	gene	4017870	4018298	.	+	.	ID=gene3575;Dbxref=GeneID:4488274;Name=AHA_3579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3579
NC_008570.1	RefSeq	CDS	4017870	4018298	.	+	0	ID=cds3463;Parent=gene3575;Dbxref=Genbank:YP_858049.1,GeneID:4488274;Name=YP_858049.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_858049.1;transl_table=11
NC_008570.1	RefSeq	gene	4018374	4020203	.	+	.	ID=gene3576;Dbxref=GeneID:4488275;Name=AHA_3580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3580
NC_008570.1	RefSeq	CDS	4018374	4020203	.	+	0	ID=cds3464;Parent=gene3576;Dbxref=Genbank:YP_858050.1,GeneID:4488275;Name=YP_858050.1;Note=identified by match to protein family HMM PF04326;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=YP_858050.1;transl_table=11
NC_008570.1	RefSeq	gene	4020513	4021343	.	+	.	ID=gene3577;Dbxref=GeneID:4488276;Name=AHA_3581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3581
NC_008570.1	RefSeq	CDS	4020513	4021343	.	+	0	ID=cds3465;Parent=gene3577;Dbxref=Genbank:YP_858051.1,GeneID:4488276;Name=YP_858051.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=hydrolase;protein_id=YP_858051.1;transl_table=11
NC_008570.1	RefSeq	gene	4021377	4022486	.	-	.	ID=gene3578;Dbxref=GeneID:4488277;Name=AHA_3582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3582
NC_008570.1	RefSeq	CDS	4021377	4022486	.	-	0	ID=cds3466;Parent=gene3578;Dbxref=Genbank:YP_858052.1,GeneID:4488277;Name=YP_858052.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858052.1;transl_table=11
NC_008570.1	RefSeq	gene	4022787	4024304	.	-	.	ID=gene3579;Dbxref=GeneID:4488278;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AHA_3583
NC_008570.1	RefSeq	CDS	4022787	4024304	.	-	0	ID=cds3467;Parent=gene3579;Dbxref=Genbank:YP_858053.1,GeneID:4488278;Name=YP_858053.1;Note=identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121;gbkey=CDS;gene=putP;product=sodium/proline symporter;protein_id=YP_858053.1;transl_table=11
NC_008570.1	RefSeq	gene	4024593	4025627	.	-	.	ID=gene3580;Dbxref=GeneID:4489735;Name=AHA_3584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3584
NC_008570.1	RefSeq	CDS	4024593	4025627	.	-	0	ID=cds3468;Parent=gene3580;Dbxref=Genbank:YP_858054.1,GeneID:4489735;Name=YP_858054.1;Note=identified by match to protein family HMM PF03734;gbkey=CDS;product=LysM domain-containing protein;protein_id=YP_858054.1;transl_table=11
NC_008570.1	RefSeq	gene	4025707	4026948	.	-	.	ID=gene3581;Dbxref=GeneID:4489736;Name=AHA_3585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3585
NC_008570.1	RefSeq	CDS	4025707	4026948	.	-	0	ID=cds3469;Parent=gene3581;Dbxref=Genbank:YP_858055.1,GeneID:4489736;Name=YP_858055.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;product=mechanosensitive ion channel;protein_id=YP_858055.1;transl_table=11
NC_008570.1	RefSeq	gene	4027082	4028281	.	-	.	ID=gene3582;Dbxref=GeneID:4489737;Name=ackA-2;gbkey=Gene;gene=ackA-2;gene_biotype=protein_coding;locus_tag=AHA_3586
NC_008570.1	RefSeq	CDS	4027082	4028281	.	-	0	ID=cds3470;Parent=gene3582;Dbxref=Genbank:YP_858056.1,GeneID:4489737;Name=YP_858056.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA-2;product=acetate kinase;protein_id=YP_858056.1;transl_table=11
NC_008570.1	RefSeq	gene	4028456	4028926	.	-	.	ID=gene3583;Dbxref=GeneID:4489738;Name=AHA_3587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3587
NC_008570.1	RefSeq	CDS	4028456	4028926	.	-	0	ID=cds3471;Parent=gene3583;Dbxref=Genbank:YP_858057.1,GeneID:4489738;Name=YP_858057.1;Note=identified by similarity to GB:CAG73302.1%3B match to protein family HMM PF04074%3B match to protein family HMM TIGR00022;gbkey=CDS;product=hypothetical protein;protein_id=YP_858057.1;transl_table=11
NC_008570.1	RefSeq	gene	4029237	4030343	.	-	.	ID=gene3584;Dbxref=GeneID:4489739;Name=AHA_3588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3588
NC_008570.1	RefSeq	CDS	4029237	4030343	.	-	0	ID=cds3472;Parent=gene3584;Dbxref=Genbank:YP_858058.1,GeneID:4489739;Name=YP_858058.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=acyltransferase;protein_id=YP_858058.1;transl_table=11
NC_008570.1	RefSeq	gene	4030504	4032153	.	-	.	ID=gene3585;Dbxref=GeneID:4489740;Name=AHA_3589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3589
NC_008570.1	RefSeq	CDS	4030504	4032153	.	-	0	ID=cds3473;Parent=gene3585;Dbxref=Genbank:YP_858059.1,GeneID:4489740;Name=YP_858059.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=multicopper oxidase;protein_id=YP_858059.1;transl_table=11
NC_008570.1	RefSeq	gene	4032410	4033102	.	-	.	ID=gene3586;Dbxref=GeneID:4489741;Name=AHA_3590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3590
NC_008570.1	RefSeq	CDS	4032410	4033102	.	-	0	ID=cds3474;Parent=gene3586;Dbxref=Genbank:YP_858060.1,GeneID:4489741;Name=YP_858060.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035;gbkey=CDS;product=aspartate racemase;protein_id=YP_858060.1;transl_table=11
NC_008570.1	RefSeq	gene	4033247	4033837	.	-	.	ID=gene3587;Dbxref=GeneID:4489742;Name=AHA_3591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3591
NC_008570.1	RefSeq	CDS	4033247	4033837	.	-	0	ID=cds3475;Parent=gene3587;Dbxref=Genbank:YP_858061.1,GeneID:4489742;Name=YP_858061.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=lysine exporter protein;protein_id=YP_858061.1;transl_table=11
NC_008570.1	RefSeq	gene	4033899	4036052	.	+	.	ID=gene3588;Dbxref=GeneID:4489743;Name=AHA_3592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3592
NC_008570.1	RefSeq	CDS	4033899	4036052	.	+	0	ID=cds3476;Parent=gene3588;Dbxref=Genbank:YP_858062.1,GeneID:4489743;Name=YP_858062.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_858062.1;transl_table=11
NC_008570.1	RefSeq	gene	4036095	4036559	.	+	.	ID=gene3589;Dbxref=GeneID:4489744;Name=AHA_3593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3593
NC_008570.1	RefSeq	CDS	4036095	4036559	.	+	0	ID=cds3477;Parent=gene3589;Dbxref=Genbank:YP_858063.1,GeneID:4489744;Name=YP_858063.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858063.1;transl_table=11
NC_008570.1	RefSeq	gene	4036620	4038719	.	+	.	ID=gene3590;Dbxref=GeneID:4489745;Name=AHA_3594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3594
NC_008570.1	RefSeq	CDS	4036620	4038719	.	+	0	ID=cds3478;Parent=gene3590;Dbxref=Genbank:YP_858064.1,GeneID:4489745;Name=YP_858064.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858064.1;transl_table=11
NC_008570.1	RefSeq	gene	4038689	4039414	.	+	.	ID=gene3591;Dbxref=GeneID:4489746;Name=AHA_3596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3596
NC_008570.1	RefSeq	CDS	4038689	4039414	.	+	0	ID=cds3479;Parent=gene3591;Dbxref=Genbank:YP_858065.1,GeneID:4489746;Name=YP_858065.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858065.1;transl_table=11
NC_008570.1	RefSeq	gene	4039411	4041048	.	-	.	ID=gene3592;Dbxref=GeneID:4489747;Name=AHA_3595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3595
NC_008570.1	RefSeq	CDS	4039411	4041048	.	-	0	ID=cds3480;Parent=gene3592;Dbxref=Genbank:YP_858066.1,GeneID:4489747;Name=YP_858066.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858066.1;transl_table=11
NC_008570.1	RefSeq	gene	4039525	4041150	.	+	.	ID=gene3593;Dbxref=GeneID:4489748;Name=AHA_3597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3597
NC_008570.1	RefSeq	CDS	4039525	4041150	.	+	0	ID=cds3481;Parent=gene3593;Dbxref=Genbank:YP_858067.1,GeneID:4489748;Name=YP_858067.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858067.1;transl_table=11
NC_008570.1	RefSeq	gene	4041171	4042484	.	-	.	ID=gene3594;Dbxref=GeneID:4489749;Name=AHA_3598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3598
NC_008570.1	RefSeq	CDS	4041171	4042484	.	-	0	ID=cds3482;Parent=gene3594;Dbxref=Genbank:YP_858068.1,GeneID:4489749;Name=YP_858068.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;product=sodium-dependent symporter family protein;protein_id=YP_858068.1;transl_table=11
NC_008570.1	RefSeq	gene	4042708	4043655	.	+	.	ID=gene3595;Dbxref=GeneID:4489750;Name=AHA_3599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3599
NC_008570.1	RefSeq	CDS	4042708	4043655	.	+	0	ID=cds3483;Parent=gene3595;Dbxref=Genbank:YP_858069.1,GeneID:4489750;Name=YP_858069.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858069.1;transl_table=11
NC_008570.1	RefSeq	gene	4043656	4044969	.	-	.	ID=gene3596;Dbxref=GeneID:4489751;Name=AHA_3600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3600
NC_008570.1	RefSeq	CDS	4043656	4044969	.	-	0	ID=cds3484;Parent=gene3596;Dbxref=Genbank:YP_858070.1,GeneID:4489751;Name=YP_858070.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;product=sodium-dependent transporter;protein_id=YP_858070.1;transl_table=11
NC_008570.1	RefSeq	gene	4045184	4046023	.	-	.	ID=gene3597;Dbxref=GeneID:4489752;Name=AHA_3601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3601
NC_008570.1	RefSeq	CDS	4045184	4046023	.	-	0	ID=cds3485;Parent=gene3597;Dbxref=Genbank:YP_858071.1,GeneID:4489752;Name=YP_858071.1;Note=identified by match to protein family HMM PF03171;gbkey=CDS;product=isopenicillin N synthase;protein_id=YP_858071.1;transl_table=11
NC_008570.1	RefSeq	gene	4046232	4046795	.	+	.	ID=gene3598;Dbxref=GeneID:4489753;Name=AHA_3602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3602
NC_008570.1	RefSeq	CDS	4046232	4046795	.	+	0	ID=cds3486;Parent=gene3598;Dbxref=Genbank:YP_858072.1,GeneID:4489753;Name=YP_858072.1;gbkey=CDS;product=DNA repair ATPase;protein_id=YP_858072.1;transl_table=11
NC_008570.1	RefSeq	gene	4046848	4047669	.	-	.	ID=gene3599;Dbxref=GeneID:4487841;Name=AHA_3603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3603
NC_008570.1	RefSeq	CDS	4046848	4047669	.	-	0	ID=cds3487;Parent=gene3599;Dbxref=Genbank:YP_858073.1,GeneID:4487841;Name=YP_858073.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;product=phosphatase YbhA;protein_id=YP_858073.1;transl_table=11
NC_008570.1	RefSeq	gene	4047972	4049213	.	-	.	ID=gene3600;Dbxref=GeneID:4487842;Name=AHA_3604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3604
NC_008570.1	RefSeq	CDS	4047972	4049213	.	-	0	ID=cds3488;Parent=gene3600;Dbxref=Genbank:YP_858074.1,GeneID:4487842;Name=YP_858074.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=MFS family transporter;protein_id=YP_858074.1;transl_table=11
NC_008570.1	RefSeq	gene	4049380	4050000	.	+	.	ID=gene3601;Dbxref=GeneID:4487843;Name=AHA_3605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3605
NC_008570.1	RefSeq	CDS	4049380	4050000	.	+	0	ID=cds3489;Parent=gene3601;Dbxref=Genbank:YP_858075.1,GeneID:4487843;Name=YP_858075.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858075.1;transl_table=11
NC_008570.1	RefSeq	gene	4050309	4050785	.	+	.	ID=gene3602;Dbxref=GeneID:4487844;Name=AHA_3606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3606
NC_008570.1	RefSeq	CDS	4050309	4050785	.	+	0	ID=cds3490;Parent=gene3602;Dbxref=Genbank:YP_858076.1,GeneID:4487844;Name=YP_858076.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;product=bkd operon transcriptional regulator;protein_id=YP_858076.1;transl_table=11
NC_008570.1	RefSeq	gene	4050875	4051192	.	-	.	ID=gene3603;Dbxref=GeneID:4487845;Name=AHA_3607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3607
NC_008570.1	RefSeq	CDS	4050875	4051192	.	-	0	ID=cds3491;Parent=gene3603;Dbxref=Genbank:YP_858077.1,GeneID:4487845;Name=YP_858077.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858077.1;transl_table=11
NC_008570.1	RefSeq	gene	4051338	4051565	.	-	.	ID=gene3604;Dbxref=GeneID:4487846;Name=AHA_3608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3608
NC_008570.1	RefSeq	CDS	4051338	4051565	.	-	0	ID=cds3492;Parent=gene3604;Dbxref=Genbank:YP_858078.1,GeneID:4487846;Name=YP_858078.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858078.1;transl_table=11
NC_008570.1	RefSeq	gene	4051599	4052093	.	-	.	ID=gene3605;Dbxref=GeneID:4487847;Name=AHA_3609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3609
NC_008570.1	RefSeq	CDS	4051599	4052093	.	-	0	ID=cds3493;Parent=gene3605;Dbxref=Genbank:YP_858079.1,GeneID:4487847;Name=YP_858079.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_858079.1;transl_table=11
NC_008570.1	RefSeq	gene	4052137	4052613	.	+	.	ID=gene3606;Dbxref=GeneID:4487848;Name=AHA_3610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3610
NC_008570.1	RefSeq	CDS	4052137	4052613	.	+	0	ID=cds3494;Parent=gene3606;Dbxref=Genbank:YP_858080.1,GeneID:4487848;Name=YP_858080.1;Note=identified by match to protein family HMM PF02566;gbkey=CDS;product=organic hydroperoxide reductase;protein_id=YP_858080.1;transl_table=11
NC_008570.1	RefSeq	gene	4052696	4053700	.	+	.	ID=gene3607;Dbxref=GeneID:4487849;Name=AHA_3611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3611
NC_008570.1	RefSeq	CDS	4052696	4053700	.	+	0	ID=cds3495;Parent=gene3607;Dbxref=Genbank:YP_858081.1,GeneID:4487849;Name=YP_858081.1;Note=identified by match to protein family HMM PF00107;gbkey=CDS;product=NADP-dependent oxidoreductase p1;protein_id=YP_858081.1;transl_table=11
NC_008570.1	RefSeq	gene	4053807	4054250	.	+	.	ID=gene3608;Dbxref=GeneID:4487850;Name=AHA_3612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3612
NC_008570.1	RefSeq	CDS	4053807	4054250	.	+	0	ID=cds3496;Parent=gene3608;Dbxref=Genbank:YP_858082.1,GeneID:4487850;Name=YP_858082.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=nudix hydrolase 1;protein_id=YP_858082.1;transl_table=11
NC_008570.1	RefSeq	gene	4054477	4055628	.	+	.	ID=gene3609;Dbxref=GeneID:4487851;Name=AHA_3613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3613
NC_008570.1	RefSeq	CDS	4054477	4055628	.	+	0	ID=cds3497;Parent=gene3609;Dbxref=Genbank:YP_858083.1,GeneID:4487851;Name=YP_858083.1;Note=identified by match to protein family HMM PF02417%3B match to protein family HMM TIGR00937;gbkey=CDS;product=chromate transport protein ChrA;protein_id=YP_858083.1;transl_table=11
NC_008570.1	RefSeq	gene	4055709	4056101	.	-	.	ID=gene3610;Dbxref=GeneID:4487852;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AHA_3614
NC_008570.1	RefSeq	CDS	4055709	4056101	.	-	0	ID=cds3498;Parent=gene3610;Dbxref=Genbank:YP_858084.1,GeneID:4487852;Name=YP_858084.1;Note=identified by match to protein family HMM PF01641%3B match to protein family HMM TIGR00357;gbkey=CDS;gene=msrB;product=methionine-R-sulfoxide reductase;protein_id=YP_858084.1;transl_table=11
NC_008570.1	RefSeq	gene	4056158	4058299	.	-	.	ID=gene3611;Dbxref=GeneID:4487853;Name=glgX-2;gbkey=Gene;gene=glgX-2;gene_biotype=protein_coding;locus_tag=AHA_3615
NC_008570.1	RefSeq	CDS	4056158	4058299	.	-	0	ID=cds3499;Parent=gene3611;Dbxref=Genbank:YP_858085.1,GeneID:4487853;Name=YP_858085.1;Note=identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02100;gbkey=CDS;gene=glgX-2;product=glycogen debranching protein GlgX;protein_id=YP_858085.1;transl_table=11
NC_008570.1	RefSeq	gene	4058299	4060476	.	-	.	ID=gene3612;Dbxref=GeneID:4487854;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AHA_3616
NC_008570.1	RefSeq	CDS	4058299	4060476	.	-	0	ID=cds3500;Parent=gene3612;Dbxref=Genbank:YP_858086.1,GeneID:4487854;Name=YP_858086.1;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;gbkey=CDS;gene=glgB;product=glycogen branching protein;protein_id=YP_858086.1;transl_table=11
NC_008570.1	RefSeq	gene	4060559	4062835	.	-	.	ID=gene3613;Dbxref=GeneID:4487855;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AHA_3617
NC_008570.1	RefSeq	CDS	4060559	4062835	.	-	0	ID=cds3501;Parent=gene3613;Dbxref=Genbank:YP_858087.1,GeneID:4487855;Name=YP_858087.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=YP_858087.1;transl_table=11
NC_008570.1	RefSeq	gene	4063095	4064090	.	+	.	ID=gene3614;Dbxref=GeneID:4487856;Name=gap-2;gbkey=Gene;gene=gap-2;gene_biotype=protein_coding;locus_tag=AHA_3618
NC_008570.1	RefSeq	CDS	4063095	4064090	.	+	0	ID=cds3502;Parent=gene3614;Dbxref=Genbank:YP_858088.1,GeneID:4487856;Name=YP_858088.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap-2;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_858088.1;transl_table=11
NC_008570.1	RefSeq	gene	4064206	4065072	.	+	.	ID=gene3615;Dbxref=GeneID:4487857;Name=AHA_3619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3619
NC_008570.1	RefSeq	CDS	4064206	4065072	.	+	0	ID=cds3503;Parent=gene3615;Dbxref=Genbank:YP_858089.1,GeneID:4487857;Name=YP_858089.1;Note=identified by match to protein family HMM PF01263;gbkey=CDS;product=aldose 1-epimerase;protein_id=YP_858089.1;transl_table=11
NC_008570.1	RefSeq	gene	4065142	4066176	.	-	.	ID=gene3616;Dbxref=GeneID:4487858;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AHA_3620
NC_008570.1	RefSeq	CDS	4065142	4066176	.	-	0	ID=cds3504;Parent=gene3616;Dbxref=Genbank:YP_858090.1,GeneID:4487858;Name=YP_858090.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;gene=nadA;product=quinolinate synthetase;protein_id=YP_858090.1;transl_table=11
NC_008570.1	RefSeq	gene	4066356	4068461	.	+	.	ID=gene3617;Dbxref=GeneID:4487859;Name=AHA_3621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3621
NC_008570.1	RefSeq	CDS	4066356	4068461	.	+	0	ID=cds3505;Parent=gene3617;Dbxref=Genbank:YP_858091.1,GeneID:4487859;Name=YP_858091.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858091.1;transl_table=11
NC_008570.1	RefSeq	gene	4068512	4068587	.	-	.	ID=gene3618;Dbxref=GeneID:4487860;Name=AHA_3622;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3622
NC_008570.1	RefSeq	tRNA	4068512	4068587	.	-	.	ID=rna109;Parent=gene3618;Dbxref=GeneID:4487860;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4068512	4068587	.	-	.	ID=id111;Parent=rna109;Dbxref=GeneID:4487860;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4068605	4068680	.	-	.	ID=gene3619;Dbxref=GeneID:4488559;Name=AHA_3623;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3623
NC_008570.1	RefSeq	tRNA	4068605	4068680	.	-	.	ID=rna110;Parent=gene3619;Dbxref=GeneID:4488559;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4068605	4068680	.	-	.	ID=id112;Parent=rna110;Dbxref=GeneID:4488559;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4068703	4068778	.	-	.	ID=gene3620;Dbxref=GeneID:4488560;Name=AHA_3624;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3624
NC_008570.1	RefSeq	tRNA	4068703	4068778	.	-	.	ID=rna111;Parent=gene3620;Dbxref=GeneID:4488560;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4068703	4068778	.	-	.	ID=id113;Parent=rna111;Dbxref=GeneID:4488560;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4068796	4068871	.	-	.	ID=gene3621;Dbxref=GeneID:4488561;Name=AHA_3625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3625
NC_008570.1	RefSeq	tRNA	4068796	4068871	.	-	.	ID=rna112;Parent=gene3621;Dbxref=GeneID:4488561;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4068796	4068871	.	-	.	ID=id114;Parent=rna112;Dbxref=GeneID:4488561;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4068895	4068970	.	-	.	ID=gene3622;Dbxref=GeneID:4488562;Name=AHA_3626;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3626
NC_008570.1	RefSeq	tRNA	4068895	4068970	.	-	.	ID=rna113;Parent=gene3622;Dbxref=GeneID:4488562;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4068895	4068970	.	-	.	ID=id115;Parent=rna113;Dbxref=GeneID:4488562;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4068987	4069062	.	-	.	ID=gene3623;Dbxref=GeneID:4488563;Name=AHA_3627;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3627
NC_008570.1	RefSeq	tRNA	4068987	4069062	.	-	.	ID=rna114;Parent=gene3623;Dbxref=GeneID:4488563;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4068987	4069062	.	-	.	ID=id116;Parent=rna114;Dbxref=GeneID:4488563;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4069087	4069162	.	-	.	ID=gene3624;Dbxref=GeneID:4488564;Name=AHA_3628;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3628
NC_008570.1	RefSeq	tRNA	4069087	4069162	.	-	.	ID=rna115;Parent=gene3624;Dbxref=GeneID:4488564;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4069087	4069162	.	-	.	ID=id117;Parent=rna115;Dbxref=GeneID:4488564;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4069179	4069254	.	-	.	ID=gene3625;Dbxref=GeneID:4488565;Name=AHA_3629;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3629
NC_008570.1	RefSeq	tRNA	4069179	4069254	.	-	.	ID=rna116;Parent=gene3625;Dbxref=GeneID:4488565;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4069179	4069254	.	-	.	ID=id118;Parent=rna116;Dbxref=GeneID:4488565;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4069277	4069352	.	-	.	ID=gene3626;Dbxref=GeneID:4488566;Name=AHA_3630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3630
NC_008570.1	RefSeq	tRNA	4069277	4069352	.	-	.	ID=rna117;Parent=gene3626;Dbxref=GeneID:4488566;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4069277	4069352	.	-	.	ID=id119;Parent=rna117;Dbxref=GeneID:4488566;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4069370	4069445	.	-	.	ID=gene3627;Dbxref=GeneID:4488567;Name=AHA_3631;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3631
NC_008570.1	RefSeq	tRNA	4069370	4069445	.	-	.	ID=rna118;Parent=gene3627;Dbxref=GeneID:4488567;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4069370	4069445	.	-	.	ID=id120;Parent=rna118;Dbxref=GeneID:4488567;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4069469	4069544	.	-	.	ID=gene3628;Dbxref=GeneID:4488568;Name=AHA_3632;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3632
NC_008570.1	RefSeq	tRNA	4069469	4069544	.	-	.	ID=rna119;Parent=gene3628;Dbxref=GeneID:4488568;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4069469	4069544	.	-	.	ID=id121;Parent=rna119;Dbxref=GeneID:4488568;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4069566	4069641	.	-	.	ID=gene3629;Dbxref=GeneID:4488569;Name=AHA_3633;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3633
NC_008570.1	RefSeq	tRNA	4069566	4069641	.	-	.	ID=rna120;Parent=gene3629;Dbxref=GeneID:4488569;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4069566	4069641	.	-	.	ID=id122;Parent=rna120;Dbxref=GeneID:4488569;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4069690	4069765	.	-	.	ID=gene3630;Dbxref=GeneID:4488570;Name=AHA_3634;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3634
NC_008570.1	RefSeq	tRNA	4069690	4069765	.	-	.	ID=rna121;Parent=gene3630;Dbxref=GeneID:4488570;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	exon	4069690	4069765	.	-	.	ID=id123;Parent=rna121;Dbxref=GeneID:4488570;gbkey=tRNA;product=tRNA-Val
NC_008570.1	RefSeq	gene	4069797	4069872	.	-	.	ID=gene3631;Dbxref=GeneID:4488571;Name=AHA_3635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3635
NC_008570.1	RefSeq	tRNA	4069797	4069872	.	-	.	ID=rna122;Parent=gene3631;Dbxref=GeneID:4488571;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	exon	4069797	4069872	.	-	.	ID=id124;Parent=rna122;Dbxref=GeneID:4488571;gbkey=tRNA;product=tRNA-Lys
NC_008570.1	RefSeq	gene	4070047	4070859	.	-	.	ID=gene3632;Dbxref=GeneID:4488572;Name=AHA_3636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3636
NC_008570.1	RefSeq	CDS	4070047	4070859	.	-	0	ID=cds3506;Parent=gene3632;Dbxref=Genbank:YP_858092.1,GeneID:4488572;Name=YP_858092.1;Note=identified by match to protein family HMM TIGR02795;gbkey=CDS;product=hypothetical protein;protein_id=YP_858092.1;transl_table=11
NC_008570.1	RefSeq	gene	4071009	4071533	.	-	.	ID=gene3633;Dbxref=GeneID:4488573;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AHA_3637
NC_008570.1	RefSeq	CDS	4071009	4071533	.	-	0	ID=cds3507;Parent=gene3633;Dbxref=Genbank:YP_858093.1,GeneID:4488573;Name=YP_858093.1;Note=identified by match to protein family HMM PF00691%3B match to protein family HMM TIGR02802;gbkey=CDS;gene=pal;product=peptidoglycan-associated lipoprotein;protein_id=YP_858093.1;transl_table=11
NC_008570.1	RefSeq	gene	4071583	4072908	.	-	.	ID=gene3634;Dbxref=GeneID:4488574;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AHA_3638
NC_008570.1	RefSeq	CDS	4071583	4072908	.	-	0	ID=cds3508;Parent=gene3634;Dbxref=Genbank:YP_858094.1,GeneID:4488574;Name=YP_858094.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=translocation protein TolB;protein_id=YP_858094.1;transl_table=11
NC_008570.1	RefSeq	gene	4073003	4074166	.	-	.	ID=gene3635;Dbxref=GeneID:4488575;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AHA_3639
NC_008570.1	RefSeq	CDS	4073003	4074166	.	-	0	ID=cds3509;Parent=gene3635;Dbxref=Genbank:YP_858095.1,GeneID:4488575;Name=YP_858095.1;Note=identified by match to protein family HMM PF06519%3B match to protein family HMM TIGR02794;gbkey=CDS;gene=tolA;product=protein TolA;protein_id=YP_858095.1;transl_table=11
NC_008570.1	RefSeq	gene	4074172	4074618	.	-	.	ID=gene3636;Dbxref=GeneID:4488576;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AHA_3640
NC_008570.1	RefSeq	CDS	4074172	4074618	.	-	0	ID=cds3510;Parent=gene3636;Dbxref=Genbank:YP_858096.1,GeneID:4488576;Name=YP_858096.1;Note=identified by match to protein family HMM PF02472%3B match to protein family HMM TIGR02801;gbkey=CDS;gene=tolR;product=protein TolR;protein_id=YP_858096.1;transl_table=11
NC_008570.1	RefSeq	gene	4074618	4075307	.	-	.	ID=gene3637;Dbxref=GeneID:4488577;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AHA_3641
NC_008570.1	RefSeq	CDS	4074618	4075307	.	-	0	ID=cds3511;Parent=gene3637;Dbxref=Genbank:YP_858097.1,GeneID:4488577;Name=YP_858097.1;Note=identified by match to protein family HMM PF01618%3B match to protein family HMM TIGR02796;gbkey=CDS;gene=tolQ;product=protein TolQ;protein_id=YP_858097.1;transl_table=11
NC_008570.1	RefSeq	gene	4075297	4075704	.	-	.	ID=gene3638;Dbxref=GeneID:4490474;Name=AHA_3642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3642
NC_008570.1	RefSeq	CDS	4075297	4075704	.	-	0	ID=cds3512;Parent=gene3638;Dbxref=Genbank:YP_858098.1,GeneID:4490474;Name=YP_858098.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051%3B match to protein family HMM TIGR02799;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_858098.1;transl_table=11
NC_008570.1	RefSeq	gene	4075810	4076166	.	-	.	ID=gene3639;Dbxref=GeneID:4490475;Name=AHA_3643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3643
NC_008570.1	RefSeq	CDS	4075810	4076166	.	-	0	ID=cds3513;Parent=gene3639;Dbxref=Genbank:YP_858099.1,GeneID:4490475;Name=YP_858099.1;gbkey=CDS;product=protein YbgE;protein_id=YP_858099.1;transl_table=11
NC_008570.1	RefSeq	gene	4076108	4076224	.	-	.	ID=gene3640;Dbxref=GeneID:4490476;Name=AHA_3644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3644
NC_008570.1	RefSeq	CDS	4076108	4076224	.	-	0	ID=cds3514;Parent=gene3640;Dbxref=Genbank:YP_858100.1,GeneID:4490476;Name=YP_858100.1;Note=identified by match to protein family HMM PF08173%3B match to protein family HMM TIGR02106;gbkey=CDS;product=cyd operon protein YbgT;protein_id=YP_858100.1;transl_table=11
NC_008570.1	RefSeq	gene	4076239	4077375	.	-	.	ID=gene3641;Dbxref=GeneID:4490477;Name=cydB-2;gbkey=Gene;gene=cydB-2;gene_biotype=protein_coding;locus_tag=AHA_3645
NC_008570.1	RefSeq	CDS	4076239	4077375	.	-	0	ID=cds3515;Parent=gene3641;Dbxref=Genbank:YP_858101.1,GeneID:4490477;Name=YP_858101.1;Note=identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203;gbkey=CDS;gene=cydB-2;product=cytochrome d ubiquinol oxidase%2C subunit II;protein_id=YP_858101.1;transl_table=11
NC_008570.1	RefSeq	gene	4077388	4078944	.	-	.	ID=gene3642;Dbxref=GeneID:4490478;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AHA_3646
NC_008570.1	RefSeq	CDS	4077388	4078944	.	-	0	ID=cds3516;Parent=gene3642;Dbxref=Genbank:YP_858102.1,GeneID:4490478;Name=YP_858102.1;Note=identified by match to protein family HMM PF01654;gbkey=CDS;gene=cydA;product=cytochrome d ubiquinol oxidase%2C subunit I;protein_id=YP_858102.1;transl_table=11
NC_008570.1	RefSeq	gene	4079881	4080891	.	-	.	ID=gene3643;Dbxref=GeneID:4490479;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AHA_3647
NC_008570.1	RefSeq	CDS	4079881	4080891	.	-	0	ID=cds3517;Parent=gene3643;Dbxref=Genbank:YP_858103.1,GeneID:4490479;Name=YP_858103.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=YP_858103.1;transl_table=11
NC_008570.1	RefSeq	gene	4080900	4081514	.	-	.	ID=gene3644;Dbxref=GeneID:4490480;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AHA_3648
NC_008570.1	RefSeq	CDS	4080900	4081514	.	-	0	ID=cds3518;Parent=gene3644;Dbxref=Genbank:YP_858104.1,GeneID:4490480;Name=YP_858104.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=YP_858104.1;transl_table=11
NC_008570.1	RefSeq	gene	4081753	4083762	.	+	.	ID=gene3645;Dbxref=GeneID:4490481;Name=AHA_3649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3649
NC_008570.1	RefSeq	CDS	4081753	4083762	.	+	0	ID=cds3519;Parent=gene3645;Dbxref=Genbank:YP_858105.1,GeneID:4490481;Name=YP_858105.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858105.1;transl_table=11
NC_008570.1	RefSeq	gene	4083898	4085622	.	+	.	ID=gene3646;Dbxref=GeneID:4490482;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AHA_3650
NC_008570.1	RefSeq	CDS	4083898	4085622	.	+	0	ID=cds3520;Parent=gene3646;Dbxref=Genbank:YP_858106.1,GeneID:4490482;Name=YP_858106.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409;gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=YP_858106.1;transl_table=11
NC_008570.1	RefSeq	gene	4085709	4086386	.	-	.	ID=gene3647;Dbxref=GeneID:4490483;Name=AHA_3651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3651
NC_008570.1	RefSeq	CDS	4085709	4086386	.	-	0	ID=cds3521;Parent=gene3647;Dbxref=Genbank:YP_858107.1,GeneID:4490483;Name=YP_858107.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=YP_858107.1;transl_table=11
NC_008570.1	RefSeq	gene	4086451	4087080	.	-	.	ID=gene3648;Dbxref=GeneID:4490484;Name=AHA_3652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3652
NC_008570.1	RefSeq	CDS	4086451	4087080	.	-	0	ID=cds3522;Parent=gene3648;Dbxref=Genbank:YP_858108.1,GeneID:4490484;Name=YP_858108.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858108.1;transl_table=11
NC_008570.1	RefSeq	gene	4087176	4087616	.	-	.	ID=gene3649;Dbxref=GeneID:4490485;Name=AHA_3653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3653
NC_008570.1	RefSeq	CDS	4087176	4087616	.	-	0	ID=cds3523;Parent=gene3649;Dbxref=Genbank:YP_858109.1,GeneID:4490485;Name=YP_858109.1;Note=identified by match to protein family HMM PF04314;gbkey=CDS;product=transporter;protein_id=YP_858109.1;transl_table=11
NC_008570.1	RefSeq	gene	4087676	4088455	.	+	.	ID=gene3650;Dbxref=GeneID:4490486;Name=AHA_3654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3654
NC_008570.1	RefSeq	CDS	4087676	4088455	.	+	0	ID=cds3524;Parent=gene3650;Dbxref=Genbank:YP_858110.1,GeneID:4490486;Name=YP_858110.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;product=enoyl-CoA hydratase/isomerase family protein;protein_id=YP_858110.1;transl_table=11
NC_008570.1	RefSeq	gene	4088459	4088887	.	-	.	ID=gene3651;Dbxref=GeneID:4490487;Name=AHA_3655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3655
NC_008570.1	RefSeq	CDS	4088459	4088887	.	-	0	ID=cds3525;Parent=gene3651;Dbxref=Genbank:YP_858111.1,GeneID:4490487;Name=YP_858111.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858111.1;transl_table=11
NC_008570.1	RefSeq	gene	4089178	4089843	.	+	.	ID=gene3652;Dbxref=GeneID:4490488;Name=AHA_3656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3656
NC_008570.1	RefSeq	CDS	4089178	4089843	.	+	0	ID=cds3526;Parent=gene3652;Dbxref=Genbank:YP_858112.1,GeneID:4490488;Name=YP_858112.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=chloramphenicol acetyltransferase;protein_id=YP_858112.1;transl_table=11
NC_008570.1	RefSeq	gene	4089895	4090602	.	-	.	ID=gene3653;Dbxref=GeneID:4490489;Name=AHA_3657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3657
NC_008570.1	RefSeq	CDS	4089895	4090602	.	-	0	ID=cds3527;Parent=gene3653;Dbxref=Genbank:YP_858113.1,GeneID:4490489;Name=YP_858113.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858113.1;transl_table=11
NC_008570.1	RefSeq	gene	4090775	4092379	.	+	.	ID=gene3654;Dbxref=GeneID:4490490;Name=AHA_3658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3658
NC_008570.1	RefSeq	CDS	4090775	4092379	.	+	0	ID=cds3528;Parent=gene3654;Dbxref=Genbank:YP_858114.1,GeneID:4490490;Name=YP_858114.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=periplasmic murein peptide-binding protein;protein_id=YP_858114.1;transl_table=11
NC_008570.1	RefSeq	gene	4092384	4092803	.	+	.	ID=gene3655;Dbxref=GeneID:4490491;Name=AHA_3659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3659
NC_008570.1	RefSeq	CDS	4092384	4092803	.	+	0	ID=cds3529;Parent=gene3655;Dbxref=Genbank:YP_858115.1,GeneID:4490491;Name=YP_858115.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858115.1;transl_table=11
NC_008570.1	RefSeq	gene	4092858	4093277	.	-	.	ID=gene3656;Dbxref=GeneID:4490492;Name=AHA_3660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3660
NC_008570.1	RefSeq	CDS	4092858	4093277	.	-	0	ID=cds3530;Parent=gene3656;Dbxref=Genbank:YP_858116.1,GeneID:4490492;Name=YP_858116.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858116.1;transl_table=11
NC_008570.1	RefSeq	gene	4093296	4093595	.	-	.	ID=gene3657;Dbxref=GeneID:4490493;Name=AHA_3661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3661
NC_008570.1	RefSeq	CDS	4093296	4093595	.	-	0	ID=cds3531;Parent=gene3657;Dbxref=Genbank:YP_858117.1,GeneID:4490493;Name=YP_858117.1;Note=identified by match to protein family HMM PF02594%3B match to protein family HMM TIGR00251;gbkey=CDS;product=hypothetical protein;protein_id=YP_858117.1;transl_table=11
NC_008570.1	RefSeq	gene	4093595	4094146	.	-	.	ID=gene3658;Dbxref=GeneID:4487744;Name=AHA_3662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3662
NC_008570.1	RefSeq	CDS	4093595	4094146	.	-	0	ID=cds3532;Parent=gene3658;Dbxref=Genbank:YP_858118.1,GeneID:4487744;Name=YP_858118.1;Note=identified by match to protein family HMM PF02325;gbkey=CDS;product=integral membrane protein;protein_id=YP_858118.1;transl_table=11
NC_008570.1	RefSeq	gene	4094187	4095011	.	-	.	ID=gene3659;Dbxref=GeneID:4487745;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AHA_3663
NC_008570.1	RefSeq	CDS	4094187	4095011	.	-	0	ID=cds3533;Parent=gene3659;Dbxref=Genbank:YP_858119.1,GeneID:4487745;Name=YP_858119.1;Note=identified by match to protein family HMM PF01210%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=YP_858119.1;transl_table=11
NC_008570.1	RefSeq	gene	4095070	4095771	.	-	.	ID=gene3660;Dbxref=GeneID:4487746;Name=AHA_3664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3664
NC_008570.1	RefSeq	CDS	4095070	4095771	.	-	0	ID=cds3534;Parent=gene3660;Dbxref=Genbank:YP_858120.1,GeneID:4487746;Name=YP_858120.1;Note=identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044;gbkey=CDS;product=hypothetical protein;protein_id=YP_858120.1;transl_table=11
NC_008570.1	RefSeq	gene	4095811	4096845	.	+	.	ID=gene3661;Dbxref=GeneID:4487747;Name=AHA_3665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3665
NC_008570.1	RefSeq	CDS	4095811	4096845	.	+	0	ID=cds3535;Parent=gene3661;Dbxref=Genbank:YP_858121.1,GeneID:4487747;Name=YP_858121.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420;gbkey=CDS;product=twitching mobility protein;protein_id=YP_858121.1;transl_table=11
NC_008570.1	RefSeq	gene	4096874	4097983	.	+	.	ID=gene3662;Dbxref=GeneID:4487748;Name=AHA_3666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3666
NC_008570.1	RefSeq	CDS	4096874	4097983	.	+	0	ID=cds3536;Parent=gene3662;Dbxref=Genbank:YP_858122.1,GeneID:4487748;Name=YP_858122.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420;gbkey=CDS;product=twitching motility protein PilU;protein_id=YP_858122.1;transl_table=11
NC_008570.1	RefSeq	gene	4098015	4098788	.	+	.	ID=gene3663;Dbxref=GeneID:4487749;Name=AHA_3667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3667
NC_008570.1	RefSeq	CDS	4098015	4098788	.	+	0	ID=cds3537;Parent=gene3663;Dbxref=Genbank:YP_858123.1,GeneID:4487749;Name=YP_858123.1;Note=identified by match to protein family HMM PF03883;gbkey=CDS;product=hypothetical protein;protein_id=YP_858123.1;transl_table=11
NC_008570.1	RefSeq	gene	4098965	4100188	.	-	.	ID=gene3664;Dbxref=GeneID:4487750;Name=AHA_3668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3668
NC_008570.1	RefSeq	CDS	4098965	4100188	.	-	0	ID=cds3538;Parent=gene3664;Dbxref=Genbank:YP_858124.1,GeneID:4487750;Name=YP_858124.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=YP_858124.1;transl_table=11
NC_008570.1	RefSeq	gene	4100317	4101027	.	+	.	ID=gene3665;Dbxref=GeneID:4487751;Name=AHA_3669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3669
NC_008570.1	RefSeq	CDS	4100317	4101027	.	+	0	ID=cds3539;Parent=gene3665;Dbxref=Genbank:YP_858125.1,GeneID:4487751;Name=YP_858125.1;Note=identified by match to protein family HMM PF05175;gbkey=CDS;product=SmtA protein;protein_id=YP_858125.1;transl_table=11
NC_008570.1	RefSeq	gene	4101219	4102526	.	+	.	ID=gene3666;Dbxref=GeneID:4487752;Name=brnQ-2;gbkey=Gene;gene=brnQ-2;gene_biotype=protein_coding;locus_tag=AHA_3670
NC_008570.1	RefSeq	CDS	4101219	4102526	.	+	0	ID=cds3540;Parent=gene3666;Dbxref=Genbank:YP_858126.1,GeneID:4487752;Name=YP_858126.1;Note=identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ-2;product=branched-chain amino acid transport system II carrier protein;protein_id=YP_858126.1;transl_table=11
NC_008570.1	RefSeq	gene	4102863	4104197	.	+	.	ID=gene3667;Dbxref=GeneID:4487753;Name=brnQ-3;gbkey=Gene;gene=brnQ-3;gene_biotype=protein_coding;locus_tag=AHA_3671
NC_008570.1	RefSeq	CDS	4102863	4104197	.	+	0	ID=cds3541;Parent=gene3667;Dbxref=Genbank:YP_858127.1,GeneID:4487753;Name=YP_858127.1;Note=identified by similarity to SP:P37011%3B match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ-3;product=branched-chain amino acid transport system II carrier protein;protein_id=YP_858127.1;transl_table=11
NC_008570.1	RefSeq	gene	4104268	4104531	.	-	.	ID=gene3668;Dbxref=GeneID:4487754;Name=AHA_3672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3672
NC_008570.1	RefSeq	CDS	4104268	4104531	.	-	0	ID=cds3542;Parent=gene3668;Dbxref=Genbank:YP_858128.1,GeneID:4487754;Name=YP_858128.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858128.1;transl_table=11
NC_008570.1	RefSeq	gene	4104503	4104964	.	-	.	ID=gene3669;Dbxref=GeneID:4487755;Name=AHA_3673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3673
NC_008570.1	RefSeq	CDS	4104503	4104964	.	-	0	ID=cds3543;Parent=gene3669;Dbxref=Genbank:YP_858129.1,GeneID:4487755;Name=YP_858129.1;Note=identified by match to protein family HMM PF04509;gbkey=CDS;product=chemotaxis protein CheX;protein_id=YP_858129.1;transl_table=11
NC_008570.1	RefSeq	gene	4104954	4105412	.	-	.	ID=gene3670;Dbxref=GeneID:4487756;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AHA_3674
NC_008570.1	RefSeq	CDS	4104954	4105412	.	-	0	ID=cds3544;Parent=gene3670;Dbxref=Genbank:YP_858130.1,GeneID:4487756;Name=YP_858130.1;Note=identified by similarity to SP:P32692%3B match to protein family HMM PF01475;gbkey=CDS;gene=zur;product=zinc uptake regulation protein;protein_id=YP_858130.1;transl_table=11
NC_008570.1	RefSeq	gene	4105551	4106537	.	+	.	ID=gene3671;Dbxref=GeneID:4487757;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AHA_3675
NC_008570.1	RefSeq	CDS	4105551	4106537	.	+	0	ID=cds3545;Parent=gene3671;Dbxref=Genbank:YP_858131.1,GeneID:4487757;Name=YP_858131.1;Note=identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00742;gbkey=CDS;gene=dusA;product=tRNA-dihydrouridine synthase A;protein_id=YP_858131.1;transl_table=11
NC_008570.1	RefSeq	gene	4106540	4106689	.	+	.	ID=gene3672;Dbxref=GeneID:4487758;Name=AHA_3676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3676
NC_008570.1	RefSeq	CDS	4106540	4106689	.	+	0	ID=cds3546;Parent=gene3672;Dbxref=Genbank:YP_858132.1,GeneID:4487758;Name=YP_858132.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858132.1;transl_table=11
NC_008570.1	RefSeq	gene	4106764	4107189	.	-	.	ID=gene3673;Dbxref=GeneID:4487759;Name=AHA_3677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3677
NC_008570.1	RefSeq	CDS	4106764	4107189	.	-	0	ID=cds3547;Parent=gene3673;Dbxref=Genbank:YP_858133.1,GeneID:4487759;Name=YP_858133.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858133.1;transl_table=11
NC_008570.1	RefSeq	gene	4107291	4107587	.	-	.	ID=gene3674;Dbxref=GeneID:4487760;Name=AHA_3678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3678
NC_008570.1	RefSeq	CDS	4107291	4107587	.	-	0	ID=cds3548;Parent=gene3674;Dbxref=Genbank:YP_858134.1,GeneID:4487760;Name=YP_858134.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;product=DNA-binding protein HU-alpha;protein_id=YP_858134.1;transl_table=11
NC_008570.1	RefSeq	gene	4107905	4108387	.	+	.	ID=gene3675;Dbxref=GeneID:4487761;Name=algQ;gbkey=Gene;gene=algQ;gene_biotype=protein_coding;locus_tag=AHA_3679
NC_008570.1	RefSeq	CDS	4107905	4108387	.	+	0	ID=cds3549;Parent=gene3675;Dbxref=Genbank:YP_858135.1,GeneID:4487761;Name=YP_858135.1;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;gbkey=CDS;gene=algQ;product=anti-RNA polymerase sigma 70 factor;protein_id=YP_858135.1;transl_table=11
NC_008570.1	RefSeq	gene	4108489	4108869	.	+	.	ID=gene3676;Dbxref=GeneID:4487762;Name=AHA_3680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3680
NC_008570.1	RefSeq	CDS	4108489	4108869	.	+	0	ID=cds3550;Parent=gene3676;Dbxref=Genbank:YP_858136.1,GeneID:4487762;Name=YP_858136.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=YP_858136.1;transl_table=11
NC_008570.1	RefSeq	gene	4108941	4110305	.	-	.	ID=gene3677;Dbxref=GeneID:4488007;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AHA_3681
NC_008570.1	RefSeq	CDS	4108941	4110305	.	-	0	ID=cds3551;Parent=gene3677;Dbxref=Genbank:YP_858137.1,GeneID:4488007;Name=YP_858137.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=YP_858137.1;transl_table=11
NC_008570.1	RefSeq	gene	4110406	4111956	.	+	.	ID=gene3678;Dbxref=GeneID:4488008;Name=AHA_3682;Note=type IV pilus assembly protein PilZ%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by match to protein family HMM PF07238;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AHA_3682;pseudo=true
NC_008570.1	RefSeq	gene	4111911	4112678	.	+	.	ID=gene3679;Dbxref=GeneID:4488009;Name=AHA_3683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3683
NC_008570.1	RefSeq	CDS	4111911	4112678	.	+	0	ID=cds3552;Parent=gene3679;Dbxref=Genbank:YP_858138.1,GeneID:4488009;Name=YP_858138.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858138.1;transl_table=11
NC_008570.1	RefSeq	gene	4112807	4113712	.	-	.	ID=gene3680;Dbxref=GeneID:4488010;Name=AHA_3684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3684
NC_008570.1	RefSeq	CDS	4112807	4113712	.	-	0	ID=cds3553;Parent=gene3680;Dbxref=Genbank:YP_858139.1,GeneID:4488010;Name=YP_858139.1;gbkey=CDS;product=esterase/lipase;protein_id=YP_858139.1;transl_table=11
NC_008570.1	RefSeq	gene	4113762	4114772	.	-	.	ID=gene3681;Dbxref=GeneID:4488011;Name=AHA_3685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3685
NC_008570.1	RefSeq	CDS	4113762	4114772	.	-	0	ID=cds3554;Parent=gene3681;Dbxref=Genbank:YP_858140.2,GeneID:4488011;Name=YP_858140.2;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR00338%3B match to protein family HMM TIGR01488;gbkey=CDS;product=phosphoserine phosphatase;protein_id=YP_858140.2;transl_table=11
NC_008570.1	RefSeq	gene	4115555	4117801	.	+	.	ID=gene3682;Dbxref=GeneID:4488012;Name=AHA_3686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3686
NC_008570.1	RefSeq	CDS	4115555	4117801	.	+	0	ID=cds3555;Parent=gene3682;Dbxref=Genbank:YP_858141.1,GeneID:4488012;Name=YP_858141.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF01590%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=histidine kinase-response regulator hybrid protein;protein_id=YP_858141.1;transl_table=11
NC_008570.1	RefSeq	gene	4117871	4118587	.	-	.	ID=gene3683;Dbxref=GeneID:4488013;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AHA_3687
NC_008570.1	RefSeq	CDS	4117871	4118587	.	-	0	ID=cds3556;Parent=gene3683;Dbxref=Genbank:YP_858142.1,GeneID:4488013;Name=YP_858142.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=YP_858142.1;transl_table=11
NC_008570.1	RefSeq	gene	4118665	4119873	.	-	.	ID=gene3684;Dbxref=GeneID:4488014;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AHA_3688
NC_008570.1	RefSeq	CDS	4118665	4119873	.	-	0	ID=cds3557;Parent=gene3684;Dbxref=Genbank:YP_858143.1,GeneID:4488014;Name=YP_858143.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=YP_858143.1;transl_table=11
NC_008570.1	RefSeq	gene	4119888	4121219	.	-	.	ID=gene3685;Dbxref=GeneID:4488015;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AHA_3689
NC_008570.1	RefSeq	CDS	4119888	4121219	.	-	0	ID=cds3558;Parent=gene3685;Dbxref=Genbank:YP_858144.1,GeneID:4488015;Name=YP_858144.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02643%3B match to protein family HMM TIGR02644;gbkey=CDS;gene=deoA;product=thymidine phosphorylase;protein_id=YP_858144.1;transl_table=11
NC_008570.1	RefSeq	gene	4121329	4122102	.	-	.	ID=gene3686;Dbxref=GeneID:4488016;Name=deoC-2;gbkey=Gene;gene=deoC-2;gene_biotype=protein_coding;locus_tag=AHA_3690
NC_008570.1	RefSeq	CDS	4121329	4122102	.	-	0	ID=cds3559;Parent=gene3686;Dbxref=Genbank:YP_858145.1,GeneID:4488016;Name=YP_858145.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;gene=deoC-2;product=deoxyribose-phosphate aldolase;protein_id=YP_858145.1;transl_table=11
NC_008570.1	RefSeq	gene	4122788	4124062	.	-	.	ID=gene3687;Dbxref=GeneID:4488017;Name=AHA_3691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3691
NC_008570.1	RefSeq	CDS	4122788	4124062	.	-	0	ID=cds3560;Parent=gene3687;Dbxref=Genbank:YP_858146.1,GeneID:4488017;Name=YP_858146.1;Note=identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804;gbkey=CDS;product=NupC family nucleoside transporter;protein_id=YP_858146.1;transl_table=11
NC_008570.1	RefSeq	gene	4124276	4125064	.	-	.	ID=gene3688;Dbxref=GeneID:4488018;Name=AHA_3692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3692
NC_008570.1	RefSeq	CDS	4124276	4125064	.	-	0	ID=cds3561;Parent=gene3688;Dbxref=Genbank:YP_858147.1,GeneID:4488018;Name=YP_858147.1;Note=identified by match to protein family HMM PF01026;gbkey=CDS;product=deoxyribonuclease;protein_id=YP_858147.1;transl_table=11
NC_008570.1	RefSeq	gene	4125105	4125722	.	+	.	ID=gene3689;Dbxref=GeneID:4488019;Name=AHA_3693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3693
NC_008570.1	RefSeq	CDS	4125105	4125722	.	+	0	ID=cds3562;Parent=gene3689;Dbxref=Genbank:YP_858148.1,GeneID:4488019;Name=YP_858148.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=N-terminal methylation domain-containing protein;protein_id=YP_858148.1;transl_table=11
NC_008570.1	RefSeq	gene	4126088	4127440	.	-	.	ID=gene3690;Dbxref=GeneID:4488020;Name=rumA-2;gbkey=Gene;gene=rumA-2;gene_biotype=protein_coding;locus_tag=AHA_3694
NC_008570.1	RefSeq	CDS	4126088	4127440	.	-	0	ID=cds3563;Parent=gene3690;Dbxref=Genbank:YP_858149.1,GeneID:4488020;Name=YP_858149.1;Note=identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA-2;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=YP_858149.1;transl_table=11
NC_008570.1	RefSeq	gene	4127775	4129211	.	-	.	ID=gene3691;Dbxref=GeneID:4488021;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=AHA_3695
NC_008570.1	RefSeq	CDS	4127775	4129211	.	-	0	ID=cds3564;Parent=gene3691;Dbxref=Genbank:YP_858150.1,GeneID:4488021;Name=YP_858150.1;Note=identified by match to protein family HMM PF00909%3B match to protein family HMM TIGR00836;gbkey=CDS;gene=amt;product=ammonium transporter;protein_id=YP_858150.1;transl_table=11
NC_008570.1	RefSeq	gene	4129664	4129749	.	-	.	ID=gene3692;Dbxref=GeneID:4488022;Name=AHA_3696;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3696
NC_008570.1	RefSeq	tRNA	4129664	4129749	.	-	.	ID=rna123;Parent=gene3692;Dbxref=GeneID:4488022;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4129664	4129749	.	-	.	ID=id125;Parent=rna123;Dbxref=GeneID:4488022;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4129799	4130413	.	+	.	ID=gene3693;Dbxref=GeneID:4488023;Name=AHA_3697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3697
NC_008570.1	RefSeq	CDS	4129799	4130413	.	+	0	ID=cds3565;Parent=gene3693;Dbxref=Genbank:YP_858151.1,GeneID:4488023;Name=YP_858151.1;Note=identified by match to protein family HMM PF06271;gbkey=CDS;product=hypothetical protein;protein_id=YP_858151.1;transl_table=11
NC_008570.1	RefSeq	gene	4130568	4131638	.	-	.	ID=gene3694;Dbxref=GeneID:4488024;Name=AHA_3698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3698
NC_008570.1	RefSeq	CDS	4130568	4131638	.	-	0	ID=cds3566;Parent=gene3694;Dbxref=Genbank:YP_858152.1,GeneID:4488024;Name=YP_858152.1;Note=identified by match to protein family HMM PF03739;gbkey=CDS;product=permease;protein_id=YP_858152.1;transl_table=11
NC_008570.1	RefSeq	gene	4131780	4132886	.	-	.	ID=gene3695;Dbxref=GeneID:4488025;Name=AHA_3699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3699
NC_008570.1	RefSeq	CDS	4131780	4132886	.	-	0	ID=cds3567;Parent=gene3695;Dbxref=Genbank:YP_858153.1,GeneID:4488025;Name=YP_858153.1;Note=identified by match to protein family HMM PF03739;gbkey=CDS;product=permease;protein_id=YP_858153.1;transl_table=11
NC_008570.1	RefSeq	gene	4133065	4134573	.	+	.	ID=gene3696;Dbxref=GeneID:4488026;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AHA_3700
NC_008570.1	RefSeq	CDS	4133065	4134573	.	+	0	ID=cds3568;Parent=gene3696;Dbxref=Genbank:YP_858154.1,GeneID:4488026;Name=YP_858154.1;Note=catalyzes the removal of N-terminal amino acids preferably leucine from various peptides;gbkey=CDS;gene=pepA;product=leucyl aminopeptidase;protein_id=YP_858154.1;transl_table=11
NC_008570.1	RefSeq	gene	4134736	4135191	.	+	.	ID=gene3697;Dbxref=GeneID:4487349;Name=AHA_3701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3701
NC_008570.1	RefSeq	CDS	4134736	4135191	.	+	0	ID=cds3569;Parent=gene3697;Dbxref=Genbank:YP_858155.1,GeneID:4487349;Name=YP_858155.1;Note=identified by match to protein family HMM PF04364;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=YP_858155.1;transl_table=11
NC_008570.1	RefSeq	gene	4135194	4138109	.	+	.	ID=gene3698;Dbxref=GeneID:4487350;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AHA_3702
NC_008570.1	RefSeq	CDS	4135194	4138109	.	+	0	ID=cds3570;Parent=gene3698;Dbxref=Genbank:YP_858156.1,GeneID:4487350;Name=YP_858156.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=YP_858156.1;transl_table=11
NC_008570.1	RefSeq	gene	4138122	4139588	.	+	.	ID=gene3699;Dbxref=GeneID:4487351;Name=AHA_3703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3703
NC_008570.1	RefSeq	CDS	4138122	4139588	.	+	0	ID=cds3571;Parent=gene3699;Dbxref=Genbank:YP_858157.1,GeneID:4487351;Name=YP_858157.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;product=hypothetical protein;protein_id=YP_858157.1;transl_table=11
NC_008570.1	RefSeq	gene	4139607	4140272	.	+	.	ID=gene3700;Dbxref=GeneID:4487352;Name=AHA_3704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3704
NC_008570.1	RefSeq	CDS	4139607	4140272	.	+	0	ID=cds3572;Parent=gene3700;Dbxref=Genbank:YP_858158.1,GeneID:4487352;Name=YP_858158.1;gbkey=CDS;product=DedA family protein;protein_id=YP_858158.1;transl_table=11
NC_008570.1	RefSeq	gene	4140412	4141239	.	+	.	ID=gene3701;Dbxref=GeneID:4487353;Name=AHA_3705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3705
NC_008570.1	RefSeq	CDS	4140412	4141239	.	+	0	ID=cds3573;Parent=gene3701;Dbxref=Genbank:YP_858159.1,GeneID:4487353;Name=YP_858159.1;Note=identified by match to protein family HMM PF00768;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_858159.1;transl_table=11
NC_008570.1	RefSeq	gene	4141607	4141683	.	-	.	ID=gene3702;Dbxref=GeneID:4487354;Name=AHA_3706;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3706
NC_008570.1	RefSeq	tRNA	4141607	4141683	.	-	.	ID=rna124;Parent=gene3702;Dbxref=GeneID:4487354;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	4141607	4141683	.	-	.	ID=id126;Parent=rna124;Dbxref=GeneID:4487354;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	4141712	4141788	.	-	.	ID=gene3703;Dbxref=GeneID:4487355;Name=AHA_3707;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3707
NC_008570.1	RefSeq	tRNA	4141712	4141788	.	-	.	ID=rna125;Parent=gene3703;Dbxref=GeneID:4487355;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	4141712	4141788	.	-	.	ID=id127;Parent=rna125;Dbxref=GeneID:4487355;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	4141817	4141893	.	-	.	ID=gene3704;Dbxref=GeneID:4487356;Name=AHA_3708;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3708
NC_008570.1	RefSeq	tRNA	4141817	4141893	.	-	.	ID=rna126;Parent=gene3704;Dbxref=GeneID:4487356;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	4141817	4141893	.	-	.	ID=id128;Parent=rna126;Dbxref=GeneID:4487356;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	4141920	4141996	.	-	.	ID=gene3705;Dbxref=GeneID:4487357;Name=AHA_3709;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3709
NC_008570.1	RefSeq	tRNA	4141920	4141996	.	-	.	ID=rna127;Parent=gene3705;Dbxref=GeneID:4487357;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	4141920	4141996	.	-	.	ID=id129;Parent=rna127;Dbxref=GeneID:4487357;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	4142096	4142172	.	-	.	ID=gene3706;Dbxref=GeneID:4487358;Name=AHA_3710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3710
NC_008570.1	RefSeq	tRNA	4142096	4142172	.	-	.	ID=rna128;Parent=gene3706;Dbxref=GeneID:4487358;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	exon	4142096	4142172	.	-	.	ID=id130;Parent=rna128;Dbxref=GeneID:4487358;gbkey=tRNA;product=tRNA-Arg
NC_008570.1	RefSeq	gene	4142176	4142268	.	-	.	ID=gene3707;Dbxref=GeneID:4487359;Name=AHA_3711;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3711
NC_008570.1	RefSeq	tRNA	4142176	4142268	.	-	.	ID=rna129;Parent=gene3707;Dbxref=GeneID:4487359;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	exon	4142176	4142268	.	-	.	ID=id131;Parent=rna129;Dbxref=GeneID:4487359;gbkey=tRNA;product=tRNA-Ser
NC_008570.1	RefSeq	gene	4142483	4142671	.	-	.	ID=gene3708;Dbxref=GeneID:4487360;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AHA_3712
NC_008570.1	RefSeq	CDS	4142483	4142671	.	-	0	ID=cds3574;Parent=gene3708;Dbxref=Genbank:YP_858160.1,GeneID:4487360;Name=YP_858160.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;gene=csrA;product=carbon storage regulator;protein_id=YP_858160.1;transl_table=11
NC_008570.1	RefSeq	gene	4142765	4144012	.	-	.	ID=gene3709;Dbxref=GeneID:4487361;Name=AHA_3713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3713
NC_008570.1	RefSeq	CDS	4142765	4144012	.	-	0	ID=cds3575;Parent=gene3709;Dbxref=Genbank:YP_858161.1,GeneID:4487361;Name=YP_858161.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%2C in Bacillus%2C lysine sensitive%3B regulated by response to starvation.;gbkey=CDS;product=aspartate kinase;protein_id=YP_858161.1;transl_table=11
NC_008570.1	RefSeq	gene	4144029	4146653	.	-	.	ID=gene3710;Dbxref=GeneID:4488540;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AHA_3714
NC_008570.1	RefSeq	CDS	4144029	4146653	.	-	0	ID=cds3576;Parent=gene3710;Dbxref=Genbank:YP_858162.1,GeneID:4488540;Name=YP_858162.1;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=YP_858162.1;transl_table=11
NC_008570.1	RefSeq	gene	4147104	4147604	.	-	.	ID=gene3711;Dbxref=GeneID:4488541;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AHA_3715
NC_008570.1	RefSeq	CDS	4147104	4147604	.	-	0	ID=cds3577;Parent=gene3711;Dbxref=Genbank:YP_858163.1,GeneID:4488541;Name=YP_858163.1;Note=identified by similarity to SP:P33596%3B match to protein family HMM PF02631;gbkey=CDS;gene=recX;product=regulatory protein RecX;protein_id=YP_858163.1;transl_table=11
NC_008570.1	RefSeq	gene	4147646	4148710	.	-	.	ID=gene3712;Dbxref=GeneID:4488542;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AHA_3716
NC_008570.1	RefSeq	CDS	4147646	4148710	.	-	0	ID=cds3578;Parent=gene3712;Dbxref=Genbank:YP_858164.1,GeneID:4488542;Name=YP_858164.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=recombinase A;protein_id=YP_858164.1;transl_table=11
NC_008570.1	RefSeq	gene	4148790	4149281	.	-	.	ID=gene3713;Dbxref=GeneID:4488543;Name=AHA_3717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3717
NC_008570.1	RefSeq	CDS	4148790	4149281	.	-	0	ID=cds3579;Parent=gene3713;Dbxref=Genbank:YP_858165.1,GeneID:4488543;Name=YP_858165.1;Note=identified by match to protein family HMM PF02464%3B match to protein family HMM TIGR00199;gbkey=CDS;product=CinA%2C C-terminal;protein_id=YP_858165.1;transl_table=11
NC_008570.1	RefSeq	gene	4149516	4152098	.	+	.	ID=gene3714;Dbxref=GeneID:4488544;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AHA_3718
NC_008570.1	RefSeq	CDS	4149516	4152098	.	+	0	ID=cds3580;Parent=gene3714;Dbxref=Genbank:YP_858166.1,GeneID:4488544;Name=YP_858166.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=YP_858166.1;transl_table=11
NC_008570.1	RefSeq	gene	4152192	4153790	.	-	.	ID=gene3715;Dbxref=GeneID:4488545;Name=AHA_3719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3719
NC_008570.1	RefSeq	CDS	4152192	4153790	.	-	0	ID=cds3581;Parent=gene3715;Dbxref=Genbank:YP_858167.1,GeneID:4488545;Name=YP_858167.1;Note=identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842;gbkey=CDS;product=BCCT family transporter;protein_id=YP_858167.1;transl_table=11
NC_008570.1	RefSeq	gene	4153800	4154327	.	-	.	ID=gene3716;Dbxref=GeneID:4488546;Name=AHA_3720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3720
NC_008570.1	RefSeq	CDS	4153800	4154327	.	-	0	ID=cds3582;Parent=gene3716;Dbxref=Genbank:YP_858168.1,GeneID:4488546;Name=YP_858168.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858168.1;transl_table=11
NC_008570.1	RefSeq	gene	4154491	4154970	.	+	.	ID=gene3717;Dbxref=GeneID:4488547;Name=AHA_3721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3721
NC_008570.1	RefSeq	CDS	4154491	4154970	.	+	0	ID=cds3583;Parent=gene3717;Dbxref=Genbank:YP_858169.1,GeneID:4488547;Name=YP_858169.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=YP_858169.1;transl_table=11
NC_008570.1	RefSeq	gene	4155019	4155600	.	-	.	ID=gene3718;Dbxref=GeneID:4488548;Name=AHA_3722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3722
NC_008570.1	RefSeq	CDS	4155019	4155600	.	-	0	ID=cds3584;Parent=gene3718;Dbxref=Genbank:YP_858170.1,GeneID:4488548;Name=YP_858170.1;Note=identified by match to protein family HMM PF04222;gbkey=CDS;product=hypothetical protein;protein_id=YP_858170.1;transl_table=11
NC_008570.1	RefSeq	gene	4155763	4156707	.	+	.	ID=gene3719;Dbxref=GeneID:4488549;Name=AHA_3723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3723
NC_008570.1	RefSeq	CDS	4155763	4156707	.	+	0	ID=cds3585;Parent=gene3719;Dbxref=Genbank:YP_858171.1,GeneID:4488549;Name=YP_858171.1;Note=identified by match to protein family HMM PF02826;gbkey=CDS;product=D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=YP_858171.1;transl_table=11
NC_008570.1	RefSeq	gene	4156774	4158111	.	-	.	ID=gene3720;Dbxref=GeneID:4488550;Name=AHA_3724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3724
NC_008570.1	RefSeq	CDS	4156774	4158111	.	-	0	ID=cds3586;Parent=gene3720;Dbxref=Genbank:YP_858172.1,GeneID:4488550;Name=YP_858172.1;Note=identified by match to protein family HMM PF01551%3B match to protein family HMM PF04225;gbkey=CDS;product=metalloprotease opacity-associated protein A family;protein_id=YP_858172.1;transl_table=11
NC_008570.1	RefSeq	gene	4158372	4159664	.	+	.	ID=gene3721;Dbxref=GeneID:4488551;Name=AHA_3725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3725
NC_008570.1	RefSeq	CDS	4158372	4159664	.	+	0	ID=cds3587;Parent=gene3721;Dbxref=Genbank:YP_858173.1,GeneID:4488551;Name=YP_858173.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858173.1;transl_table=11
NC_008570.1	RefSeq	gene	4159664	4160605	.	+	.	ID=gene3722;Dbxref=GeneID:4488552;Name=AHA_3727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3727
NC_008570.1	RefSeq	CDS	4159664	4160605	.	+	0	ID=cds3588;Parent=gene3722;Dbxref=Genbank:YP_858174.1,GeneID:4488552;Name=YP_858174.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;product=immunogenic protein;protein_id=YP_858174.1;transl_table=11
NC_008570.1	RefSeq	gene	4160600	4161274	.	-	.	ID=gene3723;Dbxref=GeneID:4488553;Name=AHA_3726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3726
NC_008570.1	RefSeq	CDS	4160600	4161274	.	-	0	ID=cds3589;Parent=gene3723;Dbxref=Genbank:YP_858175.1,GeneID:4488553;Name=YP_858175.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858175.1;transl_table=11
NC_008570.1	RefSeq	gene	4161360	4162274	.	-	.	ID=gene3724;Dbxref=GeneID:4488554;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AHA_3728
NC_008570.1	RefSeq	CDS	4161360	4162274	.	-	0	ID=cds3590;Parent=gene3724;Dbxref=Genbank:YP_858176.1,GeneID:4488554;Name=YP_858176.1;Note=identified by similarity to SP:P39172%3B match to protein family HMM PF01297;gbkey=CDS;gene=znuA;product=zinc ABC transporter periplasmic zinc-binding protein;protein_id=YP_858176.1;transl_table=11
NC_008570.1	RefSeq	gene	4162369	4163133	.	+	.	ID=gene3725;Dbxref=GeneID:4488555;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AHA_3729
NC_008570.1	RefSeq	CDS	4162369	4163133	.	+	0	ID=cds3591;Parent=gene3725;Dbxref=Genbank:YP_858177.1,GeneID:4488555;Name=YP_858177.1;Note=identified by similarity to SP:P0A9X1%3B match to protein family HMM PF00005;gbkey=CDS;gene=znuC;product=high-affinity zinc uptake ABC transporter ATP-binding protein ZnuC;protein_id=YP_858177.1;transl_table=11
NC_008570.1	RefSeq	gene	4163155	4163934	.	+	.	ID=gene3726;Dbxref=GeneID:4488556;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AHA_3730
NC_008570.1	RefSeq	CDS	4163155	4163934	.	+	0	ID=cds3592;Parent=gene3726;Dbxref=Genbank:YP_858178.1,GeneID:4488556;Name=YP_858178.1;Note=identified by similarity to SP:P39832%3B match to protein family HMM PF00950%3B match to protein family HMM PF01032;gbkey=CDS;gene=znuB;product=zinc uptake ABC transporter permease ZnuB;protein_id=YP_858178.1;transl_table=11
NC_008570.1	RefSeq	gene	4164025	4164942	.	-	.	ID=gene3727;Dbxref=GeneID:4488557;Name=AHA_3731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3731
NC_008570.1	RefSeq	CDS	4164025	4164942	.	-	0	ID=cds3593;Parent=gene3727;Dbxref=Genbank:YP_858179.1,GeneID:4488557;Name=YP_858179.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_858179.1;transl_table=11
NC_008570.1	RefSeq	gene	4165034	4165891	.	+	.	ID=gene3728;Dbxref=GeneID:4488558;Name=AHA_3732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3732
NC_008570.1	RefSeq	CDS	4165034	4165891	.	+	0	ID=cds3594;Parent=gene3728;Dbxref=Genbank:YP_858180.1,GeneID:4488558;Name=YP_858180.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family protein;protein_id=YP_858180.1;transl_table=11
NC_008570.1	RefSeq	gene	4165902	4166483	.	-	.	ID=gene3729;Dbxref=GeneID:4488501;Name=AHA_3733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3733
NC_008570.1	RefSeq	CDS	4165902	4166483	.	-	0	ID=cds3595;Parent=gene3729;Dbxref=Genbank:YP_858181.1,GeneID:4488501;Name=YP_858181.1;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=YP_858181.1;transl_table=11
NC_008570.1	RefSeq	gene	4166586	4167488	.	+	.	ID=gene3730;Dbxref=GeneID:4488502;Name=rarD-2;gbkey=Gene;gene=rarD-2;gene_biotype=protein_coding;locus_tag=AHA_3735
NC_008570.1	RefSeq	CDS	4166586	4167488	.	+	0	ID=cds3596;Parent=gene3730;Dbxref=Genbank:YP_858182.1,GeneID:4488502;Name=YP_858182.1;Note=identified by match to protein family HMM PF00892%3B match to protein family HMM TIGR00688;gbkey=CDS;gene=rarD-2;product=RarD protein;protein_id=YP_858182.1;transl_table=11
NC_008570.1	RefSeq	gene	4167470	4168204	.	-	.	ID=gene3731;Dbxref=GeneID:4488503;Name=AHA_3734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3734
NC_008570.1	RefSeq	CDS	4167470	4168204	.	-	0	ID=cds3597;Parent=gene3731;Dbxref=Genbank:YP_858183.1,GeneID:4488503;Name=YP_858183.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858183.1;transl_table=11
NC_008570.1	RefSeq	gene	4168249	4168659	.	+	.	ID=gene3732;Dbxref=GeneID:4488504;Name=AHA_3736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3736
NC_008570.1	RefSeq	CDS	4168249	4168659	.	+	0	ID=cds3598;Parent=gene3732;Dbxref=Genbank:YP_858184.1,GeneID:4488504;Name=YP_858184.1;Note=identified by match to protein family HMM PF01541;gbkey=CDS;product=endo/excinuclease domain-containing protein;protein_id=YP_858184.1;transl_table=11
NC_008570.1	RefSeq	gene	4168744	4168962	.	-	.	ID=gene3733;Dbxref=GeneID:4488505;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AHA_3737
NC_008570.1	RefSeq	CDS	4168744	4168962	.	-	0	ID=cds3599;Parent=gene3733;Dbxref=Genbank:YP_858185.1,GeneID:4488505;Name=YP_858185.1;Note=coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia;gbkey=CDS;gene=pspG;product=phage shock protein G;protein_id=YP_858185.1;transl_table=11
NC_008570.1	RefSeq	gene	4169005	4169211	.	-	.	ID=gene3734;Dbxref=GeneID:4488506;Name=AHA_3738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3738
NC_008570.1	RefSeq	CDS	4169005	4169211	.	-	0	ID=cds3600;Parent=gene3734;Dbxref=Genbank:YP_858186.1,GeneID:4488506;Name=YP_858186.1;Note=identified by match to protein family HMM PF04024;gbkey=CDS;product=hypothetical protein;protein_id=YP_858186.1;transl_table=11
NC_008570.1	RefSeq	gene	4169214	4169876	.	-	.	ID=gene3735;Dbxref=GeneID:4488507;Name=AHA_3739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3739
NC_008570.1	RefSeq	CDS	4169214	4169876	.	-	0	ID=cds3601;Parent=gene3735;Dbxref=Genbank:YP_858187.1,GeneID:4488507;Name=YP_858187.1;Note=identified by match to protein family HMM PF04012%3B match to protein family HMM TIGR02977;gbkey=CDS;product=phage shock protein A;protein_id=YP_858187.1;transl_table=11
NC_008570.1	RefSeq	gene	4170084	4170812	.	-	.	ID=gene3736;Dbxref=GeneID:4488508;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=AHA_3740
NC_008570.1	RefSeq	CDS	4170084	4170812	.	-	0	ID=cds3602;Parent=gene3736;Dbxref=Genbank:YP_858188.1,GeneID:4488508;Name=YP_858188.1;Note=identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530;gbkey=CDS;gene=plsC;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=YP_858188.1;transl_table=11
NC_008570.1	RefSeq	gene	4170989	4171369	.	+	.	ID=gene3737;Dbxref=GeneID:4488509;Name=AHA_3741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3741
NC_008570.1	RefSeq	CDS	4170989	4171369	.	+	0	ID=cds3603;Parent=gene3737;Dbxref=Genbank:YP_858189.1,GeneID:4488509;Name=YP_858189.1;gbkey=CDS;product=membrane protein%2C suppressor for copper-sensitivity A;protein_id=YP_858189.1;transl_table=11
NC_008570.1	RefSeq	gene	4171353	4173467	.	+	.	ID=gene3738;Dbxref=GeneID:4488510;Name=AHA_3742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3742
NC_008570.1	RefSeq	CDS	4171353	4173467	.	+	0	ID=cds3604;Parent=gene3738;Dbxref=Genbank:YP_858190.1,GeneID:4488510;Name=YP_858190.1;Note=identified by match to protein family HMM PF02683;gbkey=CDS;product=membrane protein%2C suppressor for copper-sensitivity B;protein_id=YP_858190.1;transl_table=11
NC_008570.1	RefSeq	gene	4173478	4174233	.	+	.	ID=gene3739;Dbxref=GeneID:4488511;Name=AHA_3743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3743
NC_008570.1	RefSeq	CDS	4173478	4174233	.	+	0	ID=cds3605;Parent=gene3739;Dbxref=Genbank:YP_858191.1,GeneID:4488511;Name=YP_858191.1;Note=identified by match to protein family HMM PF01323;gbkey=CDS;product=secreted protein%2C suppressor for copper-sensitivity C;protein_id=YP_858191.1;transl_table=11
NC_008570.1	RefSeq	gene	4174245	4174397	.	+	.	ID=gene3740;Dbxref=GeneID:4488512;Name=AHA_3744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3744
NC_008570.1	RefSeq	CDS	4174245	4174397	.	+	0	ID=cds3606;Parent=gene3740;Dbxref=Genbank:YP_858192.1,GeneID:4488512;Name=YP_858192.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858192.1;transl_table=11
NC_008570.1	RefSeq	gene	4174473	4174928	.	+	.	ID=gene3741;Dbxref=GeneID:4488513;Name=AHA_3745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3745
NC_008570.1	RefSeq	CDS	4174473	4174928	.	+	0	ID=cds3607;Parent=gene3741;Dbxref=Genbank:YP_858193.1,GeneID:4488513;Name=YP_858193.1;Note=identified by match to protein family HMM PF00085;gbkey=CDS;product=suppressor for copper-sensitivity D;protein_id=YP_858193.1;transl_table=11
NC_008570.1	RefSeq	gene	4175115	4175492	.	+	.	ID=gene3742;Dbxref=GeneID:4488514;Name=AHA_3746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3746
NC_008570.1	RefSeq	CDS	4175115	4175492	.	+	0	ID=cds3608;Parent=gene3742;Dbxref=Genbank:YP_858194.1,GeneID:4488514;Name=YP_858194.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=DnaJ domain-containing protein;protein_id=YP_858194.1;transl_table=11
NC_008570.1	RefSeq	gene	4175516	4176058	.	+	.	ID=gene3743;Dbxref=GeneID:4488515;Name=AHA_3747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3747
NC_008570.1	RefSeq	CDS	4175516	4176058	.	+	0	ID=cds3609;Parent=gene3743;Dbxref=Genbank:YP_858195.1,GeneID:4488515;Name=YP_858195.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858195.1;transl_table=11
NC_008570.1	RefSeq	gene	4176071	4176838	.	+	.	ID=gene3744;Dbxref=GeneID:4488516;Name=AHA_3748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3748
NC_008570.1	RefSeq	CDS	4176071	4176838	.	+	0	ID=cds3610;Parent=gene3744;Dbxref=Genbank:YP_858196.1,GeneID:4488516;Name=YP_858196.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858196.1;transl_table=11
NC_008570.1	RefSeq	gene	4176850	4177752	.	+	.	ID=gene3745;Dbxref=GeneID:4488517;Name=AHA_3749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3749
NC_008570.1	RefSeq	CDS	4176850	4177752	.	+	0	ID=cds3611;Parent=gene3745;Dbxref=Genbank:YP_858197.1,GeneID:4488517;Name=YP_858197.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858197.1;transl_table=11
NC_008570.1	RefSeq	gene	4177959	4178240	.	+	.	ID=gene3746;Dbxref=GeneID:4488518;Name=AHA_3750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3750
NC_008570.1	RefSeq	CDS	4177959	4178240	.	+	0	ID=cds3612;Parent=gene3746;Dbxref=Genbank:YP_858198.1,GeneID:4488518;Name=YP_858198.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858198.1;transl_table=11
NC_008570.1	RefSeq	gene	4178299	4178673	.	+	.	ID=gene3747;Dbxref=GeneID:4488519;Name=AHA_3751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3751
NC_008570.1	RefSeq	CDS	4178299	4178673	.	+	0	ID=cds3613;Parent=gene3747;Dbxref=Genbank:YP_858199.1,GeneID:4488519;Name=YP_858199.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858199.1;transl_table=11
NC_008570.1	RefSeq	gene	4178866	4180110	.	-	.	ID=gene3748;Dbxref=GeneID:4488520;Name=AHA_3752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3752
NC_008570.1	RefSeq	CDS	4178866	4180110	.	-	0	ID=cds3614;Parent=gene3748;Dbxref=Genbank:YP_858200.1,GeneID:4488520;Name=YP_858200.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=multidrug transporter-like protein;protein_id=YP_858200.1;transl_table=11
NC_008570.1	RefSeq	gene	4180198	4181106	.	+	.	ID=gene3749;Dbxref=GeneID:4489619;Name=AHA_3753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3753
NC_008570.1	RefSeq	CDS	4180198	4181106	.	+	0	ID=cds3615;Parent=gene3749;Dbxref=Genbank:YP_858201.1,GeneID:4489619;Name=YP_858201.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_858201.1;transl_table=11
NC_008570.1	RefSeq	gene	4181200	4182282	.	-	.	ID=gene3750;Dbxref=GeneID:4489620;Name=AHA_3754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3754
NC_008570.1	RefSeq	CDS	4181200	4182282	.	-	0	ID=cds3616;Parent=gene3750;Dbxref=Genbank:YP_858202.1,GeneID:4489620;Name=YP_858202.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858202.1;transl_table=11
NC_008570.1	RefSeq	gene	4182339	4184633	.	-	.	ID=gene3751;Dbxref=GeneID:4489621;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AHA_3755
NC_008570.1	RefSeq	CDS	4182339	4184633	.	-	0	ID=cds3617;Parent=gene3751;Dbxref=Genbank:YP_858203.1,GeneID:4489621;Name=YP_858203.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=YP_858203.1;transl_table=11
NC_008570.1	RefSeq	gene	4184717	4186612	.	-	.	ID=gene3752;Dbxref=GeneID:4489622;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AHA_3756
NC_008570.1	RefSeq	CDS	4184717	4186612	.	-	0	ID=cds3618;Parent=gene3752;Dbxref=Genbank:YP_858204.1,GeneID:4489622;Name=YP_858204.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parE;product=DNA topoisomerase IV subunit B;protein_id=YP_858204.1;transl_table=11
NC_008570.1	RefSeq	gene	4186727	4188736	.	-	.	ID=gene3753;Dbxref=GeneID:4489623;Name=AHA_3757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3757
NC_008570.1	RefSeq	CDS	4186727	4188736	.	-	0	ID=cds3619;Parent=gene3753;Dbxref=Genbank:YP_858205.1,GeneID:4489623;Name=YP_858205.1;Note=identified by match to protein family HMM PF04632;gbkey=CDS;product=transporter;protein_id=YP_858205.1;transl_table=11
NC_008570.1	RefSeq	gene	4188738	4189604	.	-	.	ID=gene3754;Dbxref=GeneID:4489624;Name=AHA_3758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3758
NC_008570.1	RefSeq	CDS	4188738	4189604	.	-	0	ID=cds3620;Parent=gene3754;Dbxref=Genbank:YP_858206.1,GeneID:4489624;Name=YP_858206.1;Note=identified by match to protein family HMM PF00529;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_858206.1;transl_table=11
NC_008570.1	RefSeq	gene	4189597	4189866	.	-	.	ID=gene3755;Dbxref=GeneID:4489625;Name=AHA_3759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3759
NC_008570.1	RefSeq	CDS	4189597	4189866	.	-	0	ID=cds3621;Parent=gene3755;Dbxref=Genbank:YP_858207.1,GeneID:4489625;Name=YP_858207.1;Note=identified by match to protein family HMM PF07869;gbkey=CDS;product=hypothetical protein;protein_id=YP_858207.1;transl_table=11
NC_008570.1	RefSeq	gene	4189933	4190334	.	-	.	ID=gene3756;Dbxref=GeneID:4489626;Name=AHA_3760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3760
NC_008570.1	RefSeq	CDS	4189933	4190334	.	-	0	ID=cds3622;Parent=gene3756;Dbxref=Genbank:YP_858208.1,GeneID:4489626;Name=YP_858208.1;Note=identified by match to protein family HMM PF04828;gbkey=CDS;product=glutathione-dependent formaldehyde-activating protein;protein_id=YP_858208.1;transl_table=11
NC_008570.1	RefSeq	gene	4190372	4190995	.	-	.	ID=gene3757;Dbxref=GeneID:4489627;Name=AHA_3761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3761
NC_008570.1	RefSeq	CDS	4190372	4190995	.	-	0	ID=cds3623;Parent=gene3757;Dbxref=Genbank:YP_858209.1,GeneID:4489627;Name=YP_858209.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=mutator MutT protein;protein_id=YP_858209.1;transl_table=11
NC_008570.1	RefSeq	gene	4190998	4191585	.	-	.	ID=gene3758;Dbxref=GeneID:4489628;Name=AHA_3762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3762
NC_008570.1	RefSeq	CDS	4190998	4191585	.	-	0	ID=cds3624;Parent=gene3758;Dbxref=Genbank:YP_858210.1,GeneID:4489628;Name=YP_858210.1;Note=identified by match to protein family HMM PF05728;gbkey=CDS;product=esterase YqiA;protein_id=YP_858210.1;transl_table=11
NC_008570.1	RefSeq	gene	4191595	4192413	.	-	.	ID=gene3759;Dbxref=GeneID:4489629;Name=AHA_3763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3763
NC_008570.1	RefSeq	CDS	4191595	4192413	.	-	0	ID=cds3625;Parent=gene3759;Dbxref=Genbank:YP_858211.1,GeneID:4489629;Name=YP_858211.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=Icc protein;protein_id=YP_858211.1;transl_table=11
NC_008570.1	RefSeq	gene	4192440	4192886	.	-	.	ID=gene3760;Dbxref=GeneID:4489630;Name=AHA_3764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3764
NC_008570.1	RefSeq	CDS	4192440	4192886	.	-	0	ID=cds3626;Parent=gene3760;Dbxref=Genbank:YP_858212.1,GeneID:4489630;Name=YP_858212.1;Note=identified by match to protein family HMM PF06853;gbkey=CDS;product=phosphohydrolase;protein_id=YP_858212.1;transl_table=11
NC_008570.1	RefSeq	gene	4192888	4193598	.	-	.	ID=gene3761;Dbxref=GeneID:4489631;Name=AHA_3765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3765
NC_008570.1	RefSeq	CDS	4192888	4193598	.	-	0	ID=cds3627;Parent=gene3761;Dbxref=Genbank:YP_858213.1,GeneID:4489631;Name=YP_858213.1;Note=identified by match to protein family HMM PF00293%3B match to protein family HMM TIGR00052;gbkey=CDS;product=hypothetical protein;protein_id=YP_858213.1;transl_table=11
NC_008570.1	RefSeq	gene	4193783	4195159	.	+	.	ID=gene3762;Dbxref=GeneID:4489632;Name=AHA_3766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3766
NC_008570.1	RefSeq	CDS	4193783	4195159	.	+	0	ID=cds3628;Parent=gene3762;Dbxref=Genbank:YP_858214.1,GeneID:4489632;Name=YP_858214.1;Note=identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01844;gbkey=CDS;product=HAS ABC exporter outer membrane component;protein_id=YP_858214.1;transl_table=11
NC_008570.1	RefSeq	gene	4195263	4196690	.	-	.	ID=gene3763;Dbxref=GeneID:4489633;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AHA_3767
NC_008570.1	RefSeq	CDS	4195263	4196690	.	-	0	ID=cds3629;Parent=gene3763;Dbxref=Genbank:YP_858215.1,GeneID:4489633;Name=YP_858215.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;gene=hldE;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=YP_858215.1;transl_table=11
NC_008570.1	RefSeq	gene	4196996	4197919	.	+	.	ID=gene3764;Dbxref=GeneID:4489634;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=AHA_3768
NC_008570.1	RefSeq	CDS	4196996	4197919	.	+	0	ID=cds3630;Parent=gene3764;Dbxref=Genbank:YP_858216.1,GeneID:4489634;Name=YP_858216.1;Note=identified by match to protein family HMM PF03279%3B match to protein family HMM TIGR02207;gbkey=CDS;gene=htrB;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=YP_858216.1;transl_table=11
NC_008570.1	RefSeq	gene	4198072	4198539	.	+	.	ID=gene3765;Dbxref=GeneID:4489635;Name=AHA_3769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3769
NC_008570.1	RefSeq	CDS	4198072	4198539	.	+	0	ID=cds3631;Parent=gene3765;Dbxref=Genbank:YP_858217.1,GeneID:4489635;Name=YP_858217.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;product=TonB domain-containing protein;protein_id=YP_858217.1;transl_table=11
NC_008570.1	RefSeq	gene	4198649	4199608	.	-	.	ID=gene3766;Dbxref=GeneID:4489636;Name=AHA_3770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3770
NC_008570.1	RefSeq	CDS	4198649	4199608	.	-	0	ID=cds3632;Parent=gene3766;Dbxref=Genbank:YP_858218.1,GeneID:4489636;Name=YP_858218.1;Note=identified by match to protein family HMM PF01928;gbkey=CDS;product=adenylate cyclase;protein_id=YP_858218.1;transl_table=11
NC_008570.1	RefSeq	gene	4199773	4200459	.	+	.	ID=gene3767;Dbxref=GeneID:4489637;Name=AHA_3771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3771
NC_008570.1	RefSeq	CDS	4199773	4200459	.	+	0	ID=cds3633;Parent=gene3767;Dbxref=Genbank:YP_858219.1,GeneID:4489637;Name=YP_858219.1;Note=identified by match to protein family HMM PF01865%3B match to protein family HMM TIGR00153;gbkey=CDS;product=hypothetical protein;protein_id=YP_858219.1;transl_table=11
NC_008570.1	RefSeq	gene	4200483	4201748	.	+	.	ID=gene3768;Dbxref=GeneID:4487782;Name=AHA_3772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3772
NC_008570.1	RefSeq	CDS	4200483	4201748	.	+	0	ID=cds3634;Parent=gene3768;Dbxref=Genbank:YP_858220.1,GeneID:4487782;Name=YP_858220.1;Note=identified by match to protein family HMM PF01384;gbkey=CDS;product=Pho4 family protein;protein_id=YP_858220.1;transl_table=11
NC_008570.1	RefSeq	gene	4201896	4202357	.	+	.	ID=gene3769;Dbxref=GeneID:4487783;Name=AHA_3773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3773
NC_008570.1	RefSeq	CDS	4201896	4202357	.	+	0	ID=cds3635;Parent=gene3769;Dbxref=Genbank:YP_858221.1,GeneID:4487783;Name=YP_858221.1;Note=identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011;gbkey=CDS;product=ybaK/ebsC protein;protein_id=YP_858221.1;transl_table=11
NC_008570.1	RefSeq	gene	4202397	4203659	.	-	.	ID=gene3770;Dbxref=GeneID:4487784;Name=AHA_3774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3774
NC_008570.1	RefSeq	CDS	4202397	4203659	.	-	0	ID=cds3636;Parent=gene3770;Dbxref=Genbank:YP_858222.1,GeneID:4487784;Name=YP_858222.1;Note=identified by match to protein family HMM PF07350;gbkey=CDS;product=hypothetical protein;protein_id=YP_858222.1;transl_table=11
NC_008570.1	RefSeq	gene	4203884	4204606	.	-	.	ID=gene3771;Dbxref=GeneID:4487785;Name=AHA_3775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3775
NC_008570.1	RefSeq	CDS	4203884	4204606	.	-	0	ID=cds3637;Parent=gene3771;Dbxref=Genbank:YP_858223.1,GeneID:4487785;Name=YP_858223.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=ribosomal protein serine acetyltransferase;protein_id=YP_858223.1;transl_table=11
NC_008570.1	RefSeq	gene	4204596	4205033	.	-	.	ID=gene3772;Dbxref=GeneID:4487786;Name=AHA_3776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3776
NC_008570.1	RefSeq	CDS	4204596	4205033	.	-	0	ID=cds3638;Parent=gene3772;Dbxref=Genbank:YP_858224.1,GeneID:4487786;Name=YP_858224.1;Note=identified by match to protein family HMM PF00581;gbkey=CDS;product=hypothetical protein;protein_id=YP_858224.1;transl_table=11
NC_008570.1	RefSeq	gene	4205051	4205518	.	-	.	ID=gene3773;Dbxref=GeneID:4487787;Name=AHA_3777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3777
NC_008570.1	RefSeq	CDS	4205051	4205518	.	-	0	ID=cds3639;Parent=gene3773;Dbxref=Genbank:YP_858225.1,GeneID:4487787;Name=YP_858225.1;Note=identified by match to protein family HMM PF02566;gbkey=CDS;product=OsmC/Ohr family protein;protein_id=YP_858225.1;transl_table=11
NC_008570.1	RefSeq	gene	4205647	4207083	.	+	.	ID=gene3774;Dbxref=GeneID:4487788;Name=AHA_3778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3778
NC_008570.1	RefSeq	CDS	4205647	4207083	.	+	0	ID=cds3640;Parent=gene3774;Dbxref=Genbank:YP_858226.1,GeneID:4487788;Name=YP_858226.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_858226.1;transl_table=11
NC_008570.1	RefSeq	gene	4207099	4207992	.	-	.	ID=gene3775;Dbxref=GeneID:4487789;Name=AHA_3779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3779
NC_008570.1	RefSeq	CDS	4207099	4207992	.	-	0	ID=cds3641;Parent=gene3775;Dbxref=Genbank:YP_858227.1,GeneID:4487789;Name=YP_858227.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_858227.1;transl_table=11
NC_008570.1	RefSeq	gene	4208120	4208521	.	+	.	ID=gene3776;Dbxref=GeneID:4487790;Name=AHA_3780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3780
NC_008570.1	RefSeq	CDS	4208120	4208521	.	+	0	ID=cds3642;Parent=gene3776;Dbxref=Genbank:YP_858228.1,GeneID:4487790;Name=YP_858228.1;Note=identified by match to protein family HMM PF03788;gbkey=CDS;product=murein hydrolase exporter;protein_id=YP_858228.1;transl_table=11
NC_008570.1	RefSeq	gene	4208514	4209203	.	+	.	ID=gene3777;Dbxref=GeneID:4487791;Name=AHA_3781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3781
NC_008570.1	RefSeq	CDS	4208514	4209203	.	+	0	ID=cds3643;Parent=gene3777;Dbxref=Genbank:YP_858229.1,GeneID:4487791;Name=YP_858229.1;Note=identified by match to protein family HMM PF04172;gbkey=CDS;product=LrgB family protein;protein_id=YP_858229.1;transl_table=11
NC_008570.1	RefSeq	gene	4209300	4210214	.	+	.	ID=gene3778;Dbxref=GeneID:4487792;Name=AHA_3782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3782
NC_008570.1	RefSeq	CDS	4209300	4210214	.	+	0	ID=cds3644;Parent=gene3778;Dbxref=Genbank:YP_858230.1,GeneID:4487792;Name=YP_858230.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858230.1;transl_table=11
NC_008570.1	RefSeq	gene	4210291	4211169	.	+	.	ID=gene3779;Dbxref=GeneID:4487793;Name=AHA_3783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3783
NC_008570.1	RefSeq	CDS	4210291	4211169	.	+	0	ID=cds3645;Parent=gene3779;Dbxref=Genbank:YP_858231.1,GeneID:4487793;Name=YP_858231.1;Note=identified by similarity to GB:AAG04993.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858231.1;transl_table=11
NC_008570.1	RefSeq	gene	4211256	4212494	.	-	.	ID=gene3780;Dbxref=GeneID:4487794;Name=AHA_3784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3784
NC_008570.1	RefSeq	CDS	4211256	4212494	.	-	0	ID=cds3646;Parent=gene3780;Dbxref=Genbank:YP_858232.1,GeneID:4487794;Name=YP_858232.1;Note=identified by match to protein family HMM PF01743%3B match to protein family HMM PF01966;gbkey=CDS;product=multifunctional CCA protein;protein_id=YP_858232.1;transl_table=11
NC_008570.1	RefSeq	gene	4212835	4214412	.	+	.	ID=gene3781;Dbxref=GeneID:4487795;Name=exeA;gbkey=Gene;gene=exeA;gene_biotype=protein_coding;locus_tag=AHA_3785
NC_008570.1	RefSeq	CDS	4212835	4214412	.	+	0	ID=cds3647;Parent=gene3781;Dbxref=Genbank:YP_858233.1,GeneID:4487795;Name=YP_858233.1;Note=identified by similarity to SP:P45754%3B match to protein family HMM PF01471;gbkey=CDS;gene=exeA;product=general secretion pathway protein A;protein_id=YP_858233.1;transl_table=11
NC_008570.1	RefSeq	gene	4214412	4215095	.	+	.	ID=gene3782;Dbxref=GeneID:4487796;Name=AHA_3786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3786
NC_008570.1	RefSeq	CDS	4214412	4215095	.	+	0	ID=cds3648;Parent=gene3782;Dbxref=Genbank:YP_858234.1,GeneID:4487796;Name=YP_858234.1;gbkey=CDS;product=general secretion pathway protein B;protein_id=YP_858234.1;transl_table=11
NC_008570.1	RefSeq	gene	4215293	4216354	.	+	.	ID=gene3783;Dbxref=GeneID:4487797;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AHA_3787
NC_008570.1	RefSeq	CDS	4215293	4216354	.	+	0	ID=cds3649;Parent=gene3783;Dbxref=Genbank:YP_858235.1,GeneID:4487797;Name=YP_858235.1;Note=identified by similarity to SP:P17802%3B match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084;gbkey=CDS;gene=mutY;product=A/G-specific adenine glycosylase;protein_id=YP_858235.1;transl_table=11
NC_008570.1	RefSeq	gene	4216363	4216635	.	+	.	ID=gene3784;Dbxref=GeneID:4487798;Name=AHA_3788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3788
NC_008570.1	RefSeq	CDS	4216363	4216635	.	+	0	ID=cds3650;Parent=gene3784;Dbxref=Genbank:YP_858236.1,GeneID:4487798;Name=YP_858236.1;Note=identified by match to protein family HMM PF04362;gbkey=CDS;product=hypothetical protein;protein_id=YP_858236.1;transl_table=11
NC_008570.1	RefSeq	gene	4216639	4217829	.	+	.	ID=gene3785;Dbxref=GeneID:4487799;Name=AHA_3789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3789
NC_008570.1	RefSeq	CDS	4216639	4217829	.	+	0	ID=cds3651;Parent=gene3785;Dbxref=Genbank:YP_858237.1,GeneID:4487799;Name=YP_858237.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=membrane-bound lytic murein transglycosylase C;protein_id=YP_858237.1;transl_table=11
NC_008570.1	RefSeq	gene	4217896	4218276	.	-	.	ID=gene3786;Dbxref=GeneID:4487800;Name=AHA_3790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3790
NC_008570.1	RefSeq	CDS	4217896	4218276	.	-	0	ID=cds3652;Parent=gene3786;Dbxref=Genbank:YP_858238.1,GeneID:4487800;Name=YP_858238.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF04076;gbkey=CDS;product=OB-fold nucleic acid binding domain-containing protein;protein_id=YP_858238.1;transl_table=11
NC_008570.1	RefSeq	gene	4218430	4219530	.	+	.	ID=gene3787;Dbxref=GeneID:4487801;Name=AHA_3791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3791
NC_008570.1	RefSeq	CDS	4218430	4219530	.	+	0	ID=cds3653;Parent=gene3787;Dbxref=Genbank:YP_858239.1,GeneID:4487801;Name=YP_858239.1;Note=identified by match to protein family HMM PF00657;gbkey=CDS;product=phosphatidylcholine-sterol acyltransferase;protein_id=YP_858239.1;transl_table=11
NC_008570.1	RefSeq	gene	4219591	4220292	.	-	.	ID=gene3788;Dbxref=GeneID:4489119;Name=AHA_3792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3792
NC_008570.1	RefSeq	CDS	4219591	4220292	.	-	0	ID=cds3654;Parent=gene3788;Dbxref=Genbank:YP_858240.1,GeneID:4489119;Name=YP_858240.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858240.1;transl_table=11
NC_008570.1	RefSeq	gene	4220559	4221617	.	+	.	ID=gene3789;Dbxref=GeneID:4489120;Name=AHA_3793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3793
NC_008570.1	RefSeq	CDS	4220559	4221617	.	+	0	ID=cds3655;Parent=gene3789;Dbxref=Genbank:YP_858241.1,GeneID:4489120;Name=YP_858241.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=YP_858241.1;transl_table=11
NC_008570.1	RefSeq	gene	4221703	4222272	.	-	.	ID=gene3790;Dbxref=GeneID:4489121;Name=AHA_3794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3794
NC_008570.1	RefSeq	CDS	4221703	4222272	.	-	0	ID=cds3656;Parent=gene3790;Dbxref=Genbank:YP_858242.1,GeneID:4489121;Name=YP_858242.1;Note=identified by match to protein family HMM PF03886;gbkey=CDS;product=hypothetical protein;protein_id=YP_858242.1;transl_table=11
NC_008570.1	RefSeq	gene	4222272	4223918	.	-	.	ID=gene3791;Dbxref=GeneID:4489122;Name=AHA_3795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3795
NC_008570.1	RefSeq	CDS	4222272	4223918	.	-	0	ID=cds3657;Parent=gene3791;Dbxref=Genbank:YP_858243.1,GeneID:4489122;Name=YP_858243.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;product=paraquat-inducible protein B;protein_id=YP_858243.1;transl_table=11
NC_008570.1	RefSeq	gene	4223911	4225191	.	-	.	ID=gene3792;Dbxref=GeneID:4489123;Name=AHA_3796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3796
NC_008570.1	RefSeq	CDS	4223911	4225191	.	-	0	ID=cds3658;Parent=gene3792;Dbxref=Genbank:YP_858244.1,GeneID:4489123;Name=YP_858244.1;Note=identified by match to protein family HMM PF04403%3B match to protein family HMM TIGR00155;gbkey=CDS;product=paraquat-inducible protein A;protein_id=YP_858244.1;transl_table=11
NC_008570.1	RefSeq	gene	4225369	4225731	.	+	.	ID=gene3793;Dbxref=GeneID:4489124;Name=AHA_3797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3797
NC_008570.1	RefSeq	CDS	4225369	4225731	.	+	0	ID=cds3659;Parent=gene3793;Dbxref=Genbank:YP_858245.1,GeneID:4489124;Name=YP_858245.1;Note=identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383;gbkey=CDS;product=Hfq protein;protein_id=YP_858245.1;transl_table=11
NC_008570.1	RefSeq	gene	4225871	4226554	.	-	.	ID=gene3794;Dbxref=GeneID:4489125;Name=AHA_3798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3798
NC_008570.1	RefSeq	CDS	4225871	4226554	.	-	0	ID=cds3660;Parent=gene3794;Dbxref=Genbank:YP_858246.1,GeneID:4489125;Name=YP_858246.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR02009;gbkey=CDS;product=CbbY family protein;protein_id=YP_858246.1;transl_table=11
NC_008570.1	RefSeq	gene	4226527	4227630	.	-	.	ID=gene3795;Dbxref=GeneID:4489126;Name=AHA_3799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3799
NC_008570.1	RefSeq	CDS	4226527	4227630	.	-	0	ID=cds3661;Parent=gene3795;Dbxref=Genbank:YP_858247.1,GeneID:4489126;Name=YP_858247.1;gbkey=CDS;product=sensory box/GGDEF family protein;protein_id=YP_858247.1;transl_table=11
NC_008570.1	RefSeq	gene	4227635	4229275	.	-	.	ID=gene3796;Dbxref=GeneID:4489127;Name=AHA_3800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3800
NC_008570.1	RefSeq	CDS	4227635	4229275	.	-	0	ID=cds3662;Parent=gene3796;Dbxref=Genbank:YP_858248.1,GeneID:4489127;Name=YP_858248.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_858248.1;transl_table=11
NC_008570.1	RefSeq	gene	4229370	4230242	.	-	.	ID=gene3797;Dbxref=GeneID:4489128;Name=dapA-2;gbkey=Gene;gene=dapA-2;gene_biotype=protein_coding;locus_tag=AHA_3801
NC_008570.1	RefSeq	CDS	4229370	4230242	.	-	0	ID=cds3663;Parent=gene3797;Dbxref=Genbank:YP_858249.1,GeneID:4489128;Name=YP_858249.1;Note=identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA-2;product=dihydrodipicolinate synthase;protein_id=YP_858249.1;transl_table=11
NC_008570.1	RefSeq	gene	4230523	4231551	.	+	.	ID=gene3798;Dbxref=GeneID:4489129;Name=AHA_3802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3802
NC_008570.1	RefSeq	CDS	4230523	4231551	.	+	0	ID=cds3664;Parent=gene3798;Dbxref=Genbank:YP_858250.1,GeneID:4489129;Name=YP_858250.1;Note=identified by match to protein family HMM PF05175;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=YP_858250.1;transl_table=11
NC_008570.1	RefSeq	gene	4231701	4232918	.	+	.	ID=gene3799;Dbxref=GeneID:4489130;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AHA_3803
NC_008570.1	RefSeq	CDS	4231701	4232918	.	+	0	ID=cds3665;Parent=gene3799;Dbxref=Genbank:YP_858251.1,GeneID:4489130;Name=YP_858251.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_858251.1;transl_table=11
NC_008570.1	RefSeq	gene	4232908	4234368	.	+	.	ID=gene3800;Dbxref=GeneID:4489131;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AHA_3804
NC_008570.1	RefSeq	CDS	4232908	4234368	.	+	0	ID=cds3666;Parent=gene3800;Dbxref=Genbank:YP_858252.1,GeneID:4489131;Name=YP_858252.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=YP_858252.1;transl_table=11
NC_008570.1	RefSeq	gene	4234485	4234570	.	+	.	ID=gene3801;Dbxref=GeneID:4489132;Name=AHA_3805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3805
NC_008570.1	RefSeq	tRNA	4234485	4234570	.	+	.	ID=rna130;Parent=gene3801;Dbxref=GeneID:4489132;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4234485	4234570	.	+	.	ID=id132;Parent=rna130;Dbxref=GeneID:4489132;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4234626	4234711	.	+	.	ID=gene3802;Dbxref=GeneID:4489133;Name=AHA_3806;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3806
NC_008570.1	RefSeq	tRNA	4234626	4234711	.	+	.	ID=rna131;Parent=gene3802;Dbxref=GeneID:4489133;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4234626	4234711	.	+	.	ID=id133;Parent=rna131;Dbxref=GeneID:4489133;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4234756	4234841	.	+	.	ID=gene3803;Dbxref=GeneID:4489134;Name=AHA_3807;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3807
NC_008570.1	RefSeq	tRNA	4234756	4234841	.	+	.	ID=rna132;Parent=gene3803;Dbxref=GeneID:4489134;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4234756	4234841	.	+	.	ID=id134;Parent=rna132;Dbxref=GeneID:4489134;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4234887	4234972	.	+	.	ID=gene3804;Dbxref=GeneID:4489135;Name=AHA_3808;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3808
NC_008570.1	RefSeq	tRNA	4234887	4234972	.	+	.	ID=rna133;Parent=gene3804;Dbxref=GeneID:4489135;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4234887	4234972	.	+	.	ID=id135;Parent=rna133;Dbxref=GeneID:4489135;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4235044	4235129	.	+	.	ID=gene3805;Dbxref=GeneID:4489136;Name=AHA_3809;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3809
NC_008570.1	RefSeq	tRNA	4235044	4235129	.	+	.	ID=rna134;Parent=gene3805;Dbxref=GeneID:4489136;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	exon	4235044	4235129	.	+	.	ID=id136;Parent=rna134;Dbxref=GeneID:4489136;gbkey=tRNA;product=tRNA-Leu
NC_008570.1	RefSeq	gene	4235158	4235511	.	+	.	ID=gene3806;Dbxref=GeneID:4489137;Name=AHA_3811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3811
NC_008570.1	RefSeq	CDS	4235158	4235511	.	+	0	ID=cds3667;Parent=gene3806;Dbxref=Genbank:YP_858253.1,GeneID:4489137;Name=YP_858253.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858253.1;transl_table=11
NC_008570.1	RefSeq	gene	4235506	4235715	.	-	.	ID=gene3807;Dbxref=GeneID:4489911;Name=AHA_3810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3810
NC_008570.1	RefSeq	CDS	4235506	4235715	.	-	0	ID=cds3668;Parent=gene3807;Dbxref=Genbank:YP_858254.1,GeneID:4489911;Name=YP_858254.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858254.1;transl_table=11
NC_008570.1	RefSeq	gene	4236015	4237424	.	+	.	ID=gene3808;Dbxref=GeneID:4489912;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=AHA_3812
NC_008570.1	RefSeq	CDS	4236015	4237424	.	+	0	ID=cds3669;Parent=gene3808;Dbxref=Genbank:YP_858255.1,GeneID:4489912;Name=YP_858255.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM TIGR00931;gbkey=CDS;gene=nhaC;product=Na+/H+ antiporter NhaC;protein_id=YP_858255.1;transl_table=11
NC_008570.1	RefSeq	gene	4237530	4238453	.	+	.	ID=gene3809;Dbxref=GeneID:4489913;Name=AHA_3813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3813
NC_008570.1	RefSeq	CDS	4237530	4238453	.	+	0	ID=cds3670;Parent=gene3809;Dbxref=Genbank:YP_858256.1,GeneID:4489913;Name=YP_858256.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator;protein_id=YP_858256.1;transl_table=11
NC_008570.1	RefSeq	gene	4238653	4239798	.	+	.	ID=gene3810;Dbxref=GeneID:4489914;Name=AHA_3814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3814
NC_008570.1	RefSeq	CDS	4238653	4239798	.	+	0	ID=cds3671;Parent=gene3810;Dbxref=Genbank:YP_858257.1,GeneID:4489914;Name=YP_858257.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_858257.1;transl_table=11
NC_008570.1	RefSeq	gene	4239871	4240884	.	+	.	ID=gene3811;Dbxref=GeneID:4489915;Name=AHA_3815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3815
NC_008570.1	RefSeq	CDS	4239871	4240884	.	+	0	ID=cds3672;Parent=gene3811;Dbxref=Genbank:YP_858258.1,GeneID:4489915;Name=YP_858258.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858258.1;transl_table=11
NC_008570.1	RefSeq	gene	4240881	4241849	.	+	.	ID=gene3812;Dbxref=GeneID:4489916;Name=AHA_3816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3816
NC_008570.1	RefSeq	CDS	4240881	4241849	.	+	0	ID=cds3673;Parent=gene3812;Dbxref=Genbank:YP_858259.1,GeneID:4489916;Name=YP_858259.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858259.1;transl_table=11
NC_008570.1	RefSeq	gene	4241948	4242763	.	+	.	ID=gene3813;Dbxref=GeneID:4489917;Name=AHA_3817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3817
NC_008570.1	RefSeq	CDS	4241948	4242763	.	+	0	ID=cds3674;Parent=gene3813;Dbxref=Genbank:YP_858260.1,GeneID:4489917;Name=YP_858260.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858260.1;transl_table=11
NC_008570.1	RefSeq	gene	4242793	4244223	.	+	.	ID=gene3814;Dbxref=GeneID:4489918;Name=AHA_3818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3818
NC_008570.1	RefSeq	CDS	4242793	4244223	.	+	0	ID=cds3675;Parent=gene3814;Dbxref=Genbank:YP_858261.1,GeneID:4489918;Name=YP_858261.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=YP_858261.1;transl_table=11
NC_008570.1	RefSeq	gene	4244380	4244712	.	-	.	ID=gene3815;Dbxref=GeneID:4489919;Name=AHA_3819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3819
NC_008570.1	RefSeq	CDS	4244380	4244712	.	-	0	ID=cds3676;Parent=gene3815;Dbxref=Genbank:YP_858262.1,GeneID:4489919;Name=YP_858262.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858262.1;transl_table=11
NC_008570.1	RefSeq	gene	4245048	4245923	.	-	.	ID=gene3816;Dbxref=GeneID:4489920;Name=AHA_3820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3820
NC_008570.1	RefSeq	CDS	4245048	4245923	.	-	0	ID=cds3677;Parent=gene3816;Dbxref=Genbank:YP_858263.1,GeneID:4489920;Name=YP_858263.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite exporter family transporter;protein_id=YP_858263.1;transl_table=11
NC_008570.1	RefSeq	gene	4246018	4246476	.	+	.	ID=gene3817;Dbxref=GeneID:4489921;Name=AHA_3821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3821
NC_008570.1	RefSeq	CDS	4246018	4246476	.	+	0	ID=cds3678;Parent=gene3817;Dbxref=Genbank:YP_858264.1,GeneID:4489921;Name=YP_858264.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=YP_858264.1;transl_table=11
NC_008570.1	RefSeq	gene	4246595	4247200	.	-	.	ID=gene3818;Dbxref=GeneID:4489922;Name=AHA_3822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3822
NC_008570.1	RefSeq	CDS	4246595	4247200	.	-	0	ID=cds3679;Parent=gene3818;Dbxref=Genbank:YP_858265.1,GeneID:4489922;Name=YP_858265.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=maltose O-acetyltransferase;protein_id=YP_858265.1;transl_table=11
NC_008570.1	RefSeq	gene	4247204	4248865	.	-	.	ID=gene3819;Dbxref=GeneID:4489923;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AHA_3823
NC_008570.1	RefSeq	CDS	4247204	4248865	.	-	0	ID=cds3680;Parent=gene3819;Dbxref=Genbank:YP_858266.1,GeneID:4489923;Name=YP_858266.1;Note=identified by match to protein family HMM PF00128%3B match to protein family HMM TIGR02403;gbkey=CDS;gene=treC;product=alpha%2Calpha-phosphotrehalase;protein_id=YP_858266.1;transl_table=11
NC_008570.1	RefSeq	gene	4248934	4250454	.	-	.	ID=gene3820;Dbxref=GeneID:4489924;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=AHA_3824
NC_008570.1	RefSeq	CDS	4248934	4250454	.	-	0	ID=cds3681;Parent=gene3820;Dbxref=Genbank:YP_858267.1,GeneID:4489924;Name=YP_858267.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=treP;product=PTS system trehalose(maltose)-specific transporter subunit IIBC;protein_id=YP_858267.1;transl_table=11
NC_008570.1	RefSeq	gene	4250556	4251503	.	-	.	ID=gene3821;Dbxref=GeneID:4489925;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AHA_3825
NC_008570.1	RefSeq	CDS	4250556	4251503	.	-	0	ID=cds3682;Parent=gene3821;Dbxref=Genbank:YP_858268.1,GeneID:4489925;Name=YP_858268.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=YP_858268.1;transl_table=11
NC_008570.1	RefSeq	gene	4251714	4252664	.	+	.	ID=gene3822;Dbxref=GeneID:4489926;Name=AHA_3826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3826
NC_008570.1	RefSeq	CDS	4251714	4252664	.	+	0	ID=cds3683;Parent=gene3822;Dbxref=Genbank:YP_858269.1,GeneID:4489926;Name=YP_858269.1;Note=identified by match to protein family HMM PF03547;gbkey=CDS;product=transporter;protein_id=YP_858269.1;transl_table=11
NC_008570.1	RefSeq	gene	4252732	4252926	.	+	.	ID=gene3823;Dbxref=GeneID:4489927;Name=AHA_3827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3827
NC_008570.1	RefSeq	CDS	4252732	4252926	.	+	0	ID=cds3684;Parent=gene3823;Dbxref=Genbank:YP_858270.1,GeneID:4489927;Name=YP_858270.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;product=mercuric reductase (Hg(II) reductase);protein_id=YP_858270.1;transl_table=11
NC_008570.1	RefSeq	gene	4253059	4254117	.	+	.	ID=gene3824;Dbxref=GeneID:4489928;Name=AHA_3828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3828
NC_008570.1	RefSeq	CDS	4253059	4254117	.	+	0	ID=cds3685;Parent=gene3824;Dbxref=Genbank:YP_858271.1,GeneID:4489928;Name=YP_858271.1;Note=identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00520;gbkey=CDS;product=type II L-asparaginase;protein_id=YP_858271.1;transl_table=11
NC_008570.1	RefSeq	gene	4254208	4255341	.	-	.	ID=gene3825;Dbxref=GeneID:4489929;Name=AHA_3829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3829
NC_008570.1	RefSeq	CDS	4254208	4255341	.	-	0	ID=cds3686;Parent=gene3825;Dbxref=Genbank:YP_858272.1,GeneID:4489929;Name=YP_858272.1;Note=identified by match to protein family HMM PF01699;gbkey=CDS;product=Ca2+/Na+ antiporter;protein_id=YP_858272.1;transl_table=11
NC_008570.1	RefSeq	gene	4255585	4256172	.	+	.	ID=gene3826;Dbxref=GeneID:4489930;Name=AHA_3830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3830
NC_008570.1	RefSeq	CDS	4255585	4256172	.	+	0	ID=cds3687;Parent=gene3826;Dbxref=Genbank:YP_858273.1,GeneID:4489930;Name=YP_858273.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858273.1;transl_table=11
NC_008570.1	RefSeq	gene	4256233	4256796	.	-	.	ID=gene3827;Dbxref=GeneID:4490170;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AHA_3831
NC_008570.1	RefSeq	CDS	4256233	4256796	.	-	0	ID=cds3688;Parent=gene3827;Dbxref=Genbank:YP_858274.1,GeneID:4490170;Name=YP_858274.1;Note=catalyzes the formation of methylglyoxal from glycerone phosphate;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=YP_858274.1;transl_table=11
NC_008570.1	RefSeq	gene	4256780	4258885	.	-	.	ID=gene3828;Dbxref=GeneID:4490171;Name=AHA_3832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3832
NC_008570.1	RefSeq	CDS	4256780	4258885	.	-	0	ID=cds3689;Parent=gene3828;Dbxref=Genbank:YP_858275.1,GeneID:4490171;Name=YP_858275.1;Note=identified by match to protein family HMM PF05960;gbkey=CDS;product=hypothetical protein;protein_id=YP_858275.1;transl_table=11
NC_008570.1	RefSeq	gene	4259088	4259567	.	-	.	ID=gene3829;Dbxref=GeneID:4490172;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AHA_3833
NC_008570.1	RefSeq	CDS	4259088	4259567	.	-	0	ID=cds3690;Parent=gene3829;Dbxref=Genbank:YP_858276.1,GeneID:4490172;Name=YP_858276.1;Note=identified by match to protein family HMM PF00210%3B match to protein family HMM TIGR00754;gbkey=CDS;gene=bfr;product=bacterioferritin;protein_id=YP_858276.1;transl_table=11
NC_008570.1	RefSeq	gene	4259710	4260012	.	-	.	ID=gene3830;Dbxref=GeneID:4490173;Name=AHA_3834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3834
NC_008570.1	RefSeq	CDS	4259710	4260012	.	-	0	ID=cds3691;Parent=gene3830;Dbxref=Genbank:YP_858277.1,GeneID:4490173;Name=YP_858277.1;Note=identified by match to protein family HMM PF04324;gbkey=CDS;product=hypothetical protein;protein_id=YP_858277.1;transl_table=11
NC_008570.1	RefSeq	gene	4260054	4260365	.	+	.	ID=gene3831;Dbxref=GeneID:4490174;Name=AHA_3835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3835
NC_008570.1	RefSeq	CDS	4260054	4260365	.	+	0	ID=cds3692;Parent=gene3831;Dbxref=Genbank:YP_858278.1,GeneID:4490174;Name=YP_858278.1;gbkey=CDS;product=transcriptional activator HlyU;protein_id=YP_858278.1;transl_table=11
NC_008570.1	RefSeq	gene	4260362	4262428	.	+	.	ID=gene3832;Dbxref=GeneID:4490175;Name=AHA_3837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3837
NC_008570.1	RefSeq	CDS	4260362	4262428	.	+	0	ID=cds3693;Parent=gene3832;Dbxref=Genbank:YP_858279.1,GeneID:4490175;Name=YP_858279.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM PF05127;gbkey=CDS;product=hypothetical protein;protein_id=YP_858279.1;transl_table=11
NC_008570.1	RefSeq	gene	4262415	4263134	.	-	.	ID=gene3833;Dbxref=GeneID:4490176;Name=AHA_3836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3836
NC_008570.1	RefSeq	CDS	4262415	4263134	.	-	0	ID=cds3694;Parent=gene3833;Dbxref=Genbank:YP_858280.1,GeneID:4490176;Name=YP_858280.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=YP_858280.1;transl_table=11
NC_008570.1	RefSeq	gene	4263341	4264354	.	+	.	ID=gene3834;Dbxref=GeneID:4490177;Name=AHA_3838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3838
NC_008570.1	RefSeq	CDS	4263341	4264354	.	+	0	ID=cds3695;Parent=gene3834;Dbxref=Genbank:YP_858281.1,GeneID:4490177;Name=YP_858281.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01584;gbkey=CDS;product=chemotaxis protein CheV;protein_id=YP_858281.1;transl_table=11
NC_008570.1	RefSeq	gene	4264415	4265854	.	-	.	ID=gene3835;Dbxref=GeneID:4490178;Name=AHA_3839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3839
NC_008570.1	RefSeq	CDS	4264415	4265854	.	-	0	ID=cds3696;Parent=gene3835;Dbxref=Genbank:YP_858282.1,GeneID:4490178;Name=YP_858282.1;Note=identified by match to protein family HMM PF07670;gbkey=CDS;product=transporter gate domain-containing protein;protein_id=YP_858282.1;transl_table=11
NC_008570.1	RefSeq	gene	4265931	4266446	.	-	.	ID=gene3836;Dbxref=GeneID:4490179;Name=AHA_3840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3840
NC_008570.1	RefSeq	CDS	4265931	4266446	.	-	0	ID=cds3697;Parent=gene3836;Dbxref=Genbank:YP_858283.1,GeneID:4490179;Name=YP_858283.1;Note=identified by match to protein family HMM PF08020;gbkey=CDS;product=hypothetical protein;protein_id=YP_858283.1;transl_table=11
NC_008570.1	RefSeq	gene	4266919	4268262	.	-	.	ID=gene3837;Dbxref=GeneID:4490180;Name=AHA_3841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3841
NC_008570.1	RefSeq	CDS	4266919	4268262	.	-	0	ID=cds3698;Parent=gene3837;Dbxref=Genbank:YP_858284.1,GeneID:4490180;Name=YP_858284.1;Note=identified by match to protein family HMM PF07885;gbkey=CDS;product=Ion channel family protein;protein_id=YP_858284.1;transl_table=11
NC_008570.1	RefSeq	gene	4268521	4268596	.	-	.	ID=gene3838;Dbxref=GeneID:4490181;Name=AHA_3842;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3842
NC_008570.1	RefSeq	tRNA	4268521	4268596	.	-	.	ID=rna135;Parent=gene3838;Dbxref=GeneID:4490181;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	exon	4268521	4268596	.	-	.	ID=id137;Parent=rna135;Dbxref=GeneID:4490181;gbkey=tRNA;product=tRNA-Asn
NC_008570.1	RefSeq	gene	4268642	4268717	.	-	.	ID=gene3839;Dbxref=GeneID:4490182;Name=AHA_3843;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3843
NC_008570.1	RefSeq	tRNA	4268642	4268717	.	-	.	ID=rna136;Parent=gene3839;Dbxref=GeneID:4490182;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	exon	4268642	4268717	.	-	.	ID=id138;Parent=rna136;Dbxref=GeneID:4490182;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	gene	4268721	4268796	.	-	.	ID=gene3840;Dbxref=GeneID:4490183;Name=AHA_3844;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3844
NC_008570.1	RefSeq	tRNA	4268721	4268796	.	-	.	ID=rna137;Parent=gene3840;Dbxref=GeneID:4490183;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	exon	4268721	4268796	.	-	.	ID=id139;Parent=rna137;Dbxref=GeneID:4490183;gbkey=tRNA;product=tRNA-Thr
NC_008570.1	RefSeq	gene	4268849	4268924	.	-	.	ID=gene3841;Dbxref=GeneID:4490184;Name=AHA_3845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3845
NC_008570.1	RefSeq	tRNA	4268849	4268924	.	-	.	ID=rna138;Parent=gene3841;Dbxref=GeneID:4490184;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	exon	4268849	4268924	.	-	.	ID=id140;Parent=rna138;Dbxref=GeneID:4490184;gbkey=tRNA;product=tRNA-Phe
NC_008570.1	RefSeq	gene	4268972	4269739	.	-	.	ID=gene3842;Dbxref=GeneID:4490185;Name=AHA_3846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3846
NC_008570.1	RefSeq	CDS	4268972	4269739	.	-	0	ID=cds3699;Parent=gene3842;Dbxref=Genbank:YP_858285.1,GeneID:4490185;Name=YP_858285.1;Note=identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023;gbkey=CDS;product=hypothetical protein;protein_id=YP_858285.1;transl_table=11
NC_008570.1	RefSeq	gene	4269811	4270182	.	+	.	ID=gene3843;Dbxref=GeneID:4490186;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AHA_3847
NC_008570.1	RefSeq	CDS	4269811	4270182	.	+	0	ID=cds3700;Parent=gene3843;Dbxref=Genbank:YP_858286.1,GeneID:4490186;Name=YP_858286.1;Note=identified by similarity to SP:P31055%3B match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=YP_858286.1;transl_table=11
NC_008570.1	RefSeq	gene	4270182	4270691	.	+	.	ID=gene3844;Dbxref=GeneID:4490187;Name=folK-2;gbkey=Gene;gene=folK-2;gene_biotype=protein_coding;locus_tag=AHA_3848
NC_008570.1	RefSeq	CDS	4270182	4270691	.	+	0	ID=cds3701;Parent=gene3844;Dbxref=Genbank:YP_858287.1,GeneID:4490187;Name=YP_858287.1;Note=identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498;gbkey=CDS;gene=folK-2;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_858287.1;transl_table=11
NC_008570.1	RefSeq	gene	4270813	4271295	.	+	.	ID=gene3845;Dbxref=GeneID:4490188;Name=AHA_3849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3849
NC_008570.1	RefSeq	CDS	4270813	4271295	.	+	0	ID=cds3702;Parent=gene3845;Dbxref=Genbank:YP_858288.1,GeneID:4490188;Name=YP_858288.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;product=DNA-binding protein;protein_id=YP_858288.1;transl_table=11
NC_008570.1	RefSeq	gene	4271305	4272693	.	-	.	ID=gene3846;Dbxref=GeneID:4490009;Name=AHA_3850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3850
NC_008570.1	RefSeq	CDS	4271305	4272693	.	-	0	ID=cds3703;Parent=gene3846;Dbxref=Genbank:YP_858289.1,GeneID:4490009;Name=YP_858289.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_858289.1;transl_table=11
NC_008570.1	RefSeq	gene	4272755	4273873	.	-	.	ID=gene3847;Dbxref=GeneID:4490010;Name=AHA_3851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3851
NC_008570.1	RefSeq	CDS	4272755	4273873	.	-	0	ID=cds3704;Parent=gene3847;Dbxref=Genbank:YP_858290.1,GeneID:4490010;Name=YP_858290.1;Note=identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683;gbkey=CDS;product=cobalamin synthesis protein/P47K family protein;protein_id=YP_858290.1;transl_table=11
NC_008570.1	RefSeq	gene	4273892	4275286	.	-	.	ID=gene3848;Dbxref=GeneID:4490011;Name=AHA_3852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3852
NC_008570.1	RefSeq	CDS	4273892	4275286	.	-	0	ID=cds3705;Parent=gene3848;Dbxref=Genbank:YP_858291.1,GeneID:4490011;Name=YP_858291.1;Note=identified by match to protein family HMM PF01565;gbkey=CDS;product=FAD binding domain-containing protein;protein_id=YP_858291.1;transl_table=11
NC_008570.1	RefSeq	gene	4275410	4276027	.	-	.	ID=gene3849;Dbxref=GeneID:4490012;Name=AHA_3853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3853
NC_008570.1	RefSeq	CDS	4275410	4276027	.	-	0	ID=cds3706;Parent=gene3849;Dbxref=Genbank:YP_858292.1,GeneID:4490012;Name=YP_858292.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_858292.1;transl_table=11
NC_008570.1	RefSeq	gene	4276104	4277012	.	+	.	ID=gene3850;Dbxref=GeneID:4490013;Name=AHA_3854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3854
NC_008570.1	RefSeq	CDS	4276104	4277012	.	+	0	ID=cds3707;Parent=gene3850;Dbxref=Genbank:YP_858293.1,GeneID:4490013;Name=YP_858293.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator TrpI;protein_id=YP_858293.1;transl_table=11
NC_008570.1	RefSeq	gene	4277017	4278591	.	-	.	ID=gene3851;Dbxref=GeneID:4490014;Name=AHA_3855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3855
NC_008570.1	RefSeq	CDS	4277017	4278591	.	-	0	ID=cds3708;Parent=gene3851;Dbxref=Genbank:YP_858294.1,GeneID:4490014;Name=YP_858294.1;Note=identified by match to protein family HMM PF00563;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_858294.1;transl_table=11
NC_008570.1	RefSeq	gene	4278756	4281353	.	-	.	ID=gene3852;Dbxref=GeneID:4490015;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AHA_3856
NC_008570.1	RefSeq	CDS	4278756	4281353	.	-	0	ID=cds3709;Parent=gene3852;Dbxref=Genbank:YP_858295.2,GeneID:4490015;Name=YP_858295.2;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;gene=acnB;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=YP_858295.2;transl_table=11
NC_008570.1	RefSeq	gene	4281582	4283840	.	-	.	ID=gene3853;Dbxref=GeneID:4490016;Name=AHA_3857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3857
NC_008570.1	RefSeq	CDS	4281582	4283840	.	-	0	ID=cds3710;Parent=gene3853;Dbxref=Genbank:YP_858296.1,GeneID:4490016;Name=YP_858296.1;Note=identified by match to protein family HMM PF01734%3B match to protein family HMM PF07244;gbkey=CDS;product=serine protease;protein_id=YP_858296.1;transl_table=11
NC_008570.1	RefSeq	gene	4284039	4285985	.	+	.	ID=gene3854;Dbxref=GeneID:4490017;Name=AHA_3858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3858
NC_008570.1	RefSeq	CDS	4284039	4285985	.	+	0	ID=cds3711;Parent=gene3854;Dbxref=Genbank:YP_858297.1,GeneID:4490017;Name=YP_858297.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858297.1;transl_table=11
NC_008570.1	RefSeq	gene	4286011	4287765	.	+	.	ID=gene3855;Dbxref=GeneID:4490018;Name=AHA_3859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3859
NC_008570.1	RefSeq	CDS	4286011	4287765	.	+	0	ID=cds3712;Parent=gene3855;Dbxref=Genbank:YP_858298.1,GeneID:4490018;Name=YP_858298.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=hemolysin secretion protein;protein_id=YP_858298.1;transl_table=11
NC_008570.1	RefSeq	gene	4287909	4288091	.	+	.	ID=gene3856;Dbxref=GeneID:4490019;Name=AHA_3860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3860
NC_008570.1	RefSeq	CDS	4287909	4288091	.	+	0	ID=cds3713;Parent=gene3856;Dbxref=Genbank:YP_858299.1,GeneID:4490019;Name=YP_858299.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858299.1;transl_table=11
NC_008570.1	RefSeq	gene	4288159	4289586	.	-	.	ID=gene3857;Dbxref=GeneID:4490020;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AHA_3861
NC_008570.1	RefSeq	CDS	4288159	4289586	.	-	0	ID=cds3714;Parent=gene3857;Dbxref=Genbank:YP_858300.1,GeneID:4490020;Name=YP_858300.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;gene=lpdA;product=dihydrolipoamide dehydrogenase;protein_id=YP_858300.1;transl_table=11
NC_008570.1	RefSeq	gene	4289736	4291631	.	-	.	ID=gene3858;Dbxref=GeneID:4490021;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AHA_3862
NC_008570.1	RefSeq	CDS	4289736	4291631	.	-	0	ID=cds3715;Parent=gene3858;Dbxref=Genbank:YP_858301.1,GeneID:4490021;Name=YP_858301.1;Note=identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817%3B match to protein family HMM TIGR01348;gbkey=CDS;gene=aceF;product=pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;protein_id=YP_858301.1;transl_table=11
NC_008570.1	RefSeq	gene	4291745	4294405	.	-	.	ID=gene3859;Dbxref=GeneID:4490022;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AHA_3863
NC_008570.1	RefSeq	CDS	4291745	4294405	.	-	0	ID=cds3716;Parent=gene3859;Dbxref=Genbank:YP_858302.1,GeneID:4490022;Name=YP_858302.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase subunit E1;protein_id=YP_858302.1;transl_table=11
NC_008570.1	RefSeq	gene	4294485	4295249	.	-	.	ID=gene3860;Dbxref=GeneID:4490023;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AHA_3864
NC_008570.1	RefSeq	CDS	4294485	4295249	.	-	0	ID=cds3717;Parent=gene3860;Dbxref=Genbank:YP_858303.1,GeneID:4490023;Name=YP_858303.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator PdhR;protein_id=YP_858303.1;transl_table=11
NC_008570.1	RefSeq	gene	4295525	4296097	.	-	.	ID=gene3861;Dbxref=GeneID:4490024;Name=AHA_3865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3865
NC_008570.1	RefSeq	CDS	4295525	4296097	.	-	0	ID=cds3718;Parent=gene3861;Dbxref=Genbank:YP_858304.1,GeneID:4490024;Name=YP_858304.1;Note=identified by match to protein family HMM PF01510;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=YP_858304.1;transl_table=11
NC_008570.1	RefSeq	gene	4296188	4296715	.	+	.	ID=gene3862;Dbxref=GeneID:4490025;Name=AHA_3866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3866
NC_008570.1	RefSeq	CDS	4296188	4296715	.	+	0	ID=cds3719;Parent=gene3862;Dbxref=Genbank:YP_858305.1,GeneID:4490025;Name=YP_858305.1;Note=identified by similarity to GB:AAZ24736.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858305.1;transl_table=11
NC_008570.1	RefSeq	gene	4296721	4297578	.	+	.	ID=gene3863;Dbxref=GeneID:4490026;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AHA_3867
NC_008570.1	RefSeq	CDS	4296721	4297578	.	+	0	ID=cds3720;Parent=gene3863;Dbxref=Genbank:YP_858306.1,GeneID:4490026;Name=YP_858306.1;Note=identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078;gbkey=CDS;gene=nadC;product=nicotinate-nucleotide pyrophosphorylase;protein_id=YP_858306.1;transl_table=11
NC_008570.1	RefSeq	gene	4297901	4298383	.	+	.	ID=gene3864;Dbxref=GeneID:4490027;Name=AHA_3868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3868
NC_008570.1	RefSeq	CDS	4297901	4298383	.	+	0	ID=cds3721;Parent=gene3864;Dbxref=Genbank:YP_858307.1,GeneID:4490027;Name=YP_858307.1;Note=identified by similarity to GB:AAX12396.1%3B match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;product=pilin family protein;protein_id=YP_858307.1;transl_table=11
NC_008570.1	RefSeq	gene	4298377	4300092	.	+	.	ID=gene3865;Dbxref=GeneID:4490028;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=AHA_3869
NC_008570.1	RefSeq	CDS	4298377	4300092	.	+	0	ID=cds3722;Parent=gene3865;Dbxref=Genbank:YP_858308.1,GeneID:4490028;Name=YP_858308.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157%3B match to protein family HMM TIGR02538;gbkey=CDS;gene=pilB;product=type IV-A pilus assembly ATPase PilB;protein_id=YP_858308.1;transl_table=11
NC_008570.1	RefSeq	gene	4300208	4301449	.	+	.	ID=gene3866;Dbxref=GeneID:4490840;Name=pilC;gbkey=Gene;gene=pilC;gene_biotype=protein_coding;locus_tag=AHA_3870
NC_008570.1	RefSeq	CDS	4300208	4301449	.	+	0	ID=cds3723;Parent=gene3866;Dbxref=Genbank:YP_858309.1,GeneID:4490840;Name=YP_858309.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;gene=pilC;product=type 4 fimbrial assembly protein PilC;protein_id=YP_858309.1;transl_table=11
NC_008570.1	RefSeq	gene	4301472	4302344	.	+	.	ID=gene3867;Dbxref=GeneID:4490841;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AHA_3871
NC_008570.1	RefSeq	CDS	4301472	4302344	.	+	0	ID=cds3724;Parent=gene3867;Dbxref=Genbank:YP_858310.1,GeneID:4490841;Name=YP_858310.1;Note=identified by similarity to SP:P45794%3B match to protein family HMM PF01478%3B match to protein family HMM PF06750;gbkey=CDS;gene=gspO;product=prepilin peptidase;protein_id=YP_858310.1;transl_table=11
NC_008570.1	RefSeq	gene	4302364	4302978	.	+	.	ID=gene3868;Dbxref=GeneID:4490842;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AHA_3872
NC_008570.1	RefSeq	CDS	4302364	4302978	.	+	0	ID=cds3725;Parent=gene3868;Dbxref=Genbank:YP_858311.1,GeneID:4490842;Name=YP_858311.1;Note=identified by similarity to SP:P0A6I9%3B match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=YP_858311.1;transl_table=11
NC_008570.1	RefSeq	gene	4302950	4303738	.	+	.	ID=gene3869;Dbxref=GeneID:4490843;Name=AHA_3873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3873
NC_008570.1	RefSeq	CDS	4302950	4303738	.	+	0	ID=cds3726;Parent=gene3869;Dbxref=Genbank:YP_858312.1,GeneID:4490843;Name=YP_858312.1;Note=identified by match to protein family HMM PF07072;gbkey=CDS;product=hypothetical protein;protein_id=YP_858312.1;transl_table=11
NC_008570.1	RefSeq	gene	4303748	4303942	.	+	.	ID=gene3870;Dbxref=GeneID:4490844;Name=AHA_3874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3874
NC_008570.1	RefSeq	CDS	4303748	4303942	.	+	0	ID=cds3727;Parent=gene3870;Dbxref=Genbank:YP_858313.1,GeneID:4490844;Name=YP_858313.1;Note=identified by match to protein family HMM PF03884;gbkey=CDS;product=hypothetical protein;protein_id=YP_858313.1;transl_table=11
NC_008570.1	RefSeq	gene	4304003	4304419	.	-	.	ID=gene3871;Dbxref=GeneID:4490845;Name=AHA_3875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3875
NC_008570.1	RefSeq	CDS	4304003	4304419	.	-	0	ID=cds3728;Parent=gene3871;Dbxref=Genbank:YP_858314.1,GeneID:4490845;Name=YP_858314.1;Note=identified by match to protein family HMM PF00293%3B match to protein family HMM TIGR00586;gbkey=CDS;product=mutator MutT protein;protein_id=YP_858314.1;transl_table=11
NC_008570.1	RefSeq	gene	4304425	4305609	.	-	.	ID=gene3872;Dbxref=GeneID:4490846;Name=AHA_3876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3876
NC_008570.1	RefSeq	CDS	4304425	4305609	.	-	0	ID=cds3729;Parent=gene3872;Dbxref=Genbank:YP_858315.1,GeneID:4490846;Name=YP_858315.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858315.1;transl_table=11
NC_008570.1	RefSeq	gene	4305684	4308404	.	-	.	ID=gene3873;Dbxref=GeneID:4490847;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AHA_3877
NC_008570.1	RefSeq	CDS	4305684	4308404	.	-	0	ID=cds3730;Parent=gene3873;Dbxref=Genbank:YP_858316.1,GeneID:4490847;Name=YP_858316.1;Note=identified by similarity to SP:P10408%3B match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;product=Preprotein translocase subunit SecA;protein_id=YP_858316.1;transl_table=11
NC_008570.1	RefSeq	gene	4308464	4309369	.	-	.	ID=gene3874;Dbxref=GeneID:4490848;Name=AHA_3878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3878
NC_008570.1	RefSeq	CDS	4308464	4309369	.	-	0	ID=cds3731;Parent=gene3874;Dbxref=Genbank:YP_858317.1,GeneID:4490848;Name=YP_858317.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=M23/M37 peptidase domain-containing protein;protein_id=YP_858317.1;transl_table=11
NC_008570.1	RefSeq	gene	4309510	4310433	.	-	.	ID=gene3875;Dbxref=GeneID:4490849;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AHA_3879
NC_008570.1	RefSeq	CDS	4309510	4310433	.	-	0	ID=cds3732;Parent=gene3875;Dbxref=Genbank:YP_858318.1,GeneID:4490849;Name=YP_858318.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=YP_858318.1;transl_table=11
NC_008570.1	RefSeq	gene	4310535	4311686	.	-	.	ID=gene3876;Dbxref=GeneID:4490850;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AHA_3880
NC_008570.1	RefSeq	CDS	4310535	4311686	.	-	0	ID=cds3733;Parent=gene3876;Dbxref=Genbank:YP_858319.1,GeneID:4490850;Name=YP_858319.1;Note=identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=YP_858319.1;transl_table=11
NC_008570.1	RefSeq	gene	4311727	4312986	.	-	.	ID=gene3877;Dbxref=GeneID:4490851;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AHA_3881
NC_008570.1	RefSeq	CDS	4311727	4312986	.	-	0	ID=cds3734;Parent=gene3877;Dbxref=Genbank:YP_858320.1,GeneID:4490851;Name=YP_858320.1;Note=identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=YP_858320.1;transl_table=11
NC_008570.1	RefSeq	gene	4312967	4313650	.	-	.	ID=gene3878;Dbxref=GeneID:4490852;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AHA_3882
NC_008570.1	RefSeq	CDS	4312967	4313650	.	-	0	ID=cds3735;Parent=gene3878;Dbxref=Genbank:YP_858321.1,GeneID:4490852;Name=YP_858321.1;Note=identified by similarity to SP:P06136%3B match to protein family HMM PF03799;gbkey=CDS;gene=ftsQ;product=cell division protein FtsQ;protein_id=YP_858321.1;transl_table=11
NC_008570.1	RefSeq	gene	4313817	4315271	.	-	.	ID=gene3879;Dbxref=GeneID:4490853;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AHA_3883
NC_008570.1	RefSeq	CDS	4313817	4315271	.	-	0	ID=cds3736;Parent=gene3879;Dbxref=Genbank:YP_858322.1,GeneID:4490853;Name=YP_858322.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_858322.1;transl_table=11
NC_008570.1	RefSeq	gene	4315268	4316353	.	-	.	ID=gene3880;Dbxref=GeneID:4490854;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AHA_3884
NC_008570.1	RefSeq	CDS	4315268	4316353	.	-	0	ID=cds3737;Parent=gene3880;Dbxref=Genbank:YP_858323.1,GeneID:4490854;Name=YP_858323.1;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_858323.1;transl_table=11
NC_008570.1	RefSeq	gene	4316353	4317489	.	-	.	ID=gene3881;Dbxref=GeneID:4490855;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AHA_3885
NC_008570.1	RefSeq	CDS	4316353	4317489	.	-	0	ID=cds3738;Parent=gene3881;Dbxref=Genbank:YP_858324.1,GeneID:4490855;Name=YP_858324.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02614;gbkey=CDS;gene=ftsW;product=cell division protein FtsW;protein_id=YP_858324.1;transl_table=11
NC_008570.1	RefSeq	gene	4317531	4318814	.	-	.	ID=gene3882;Dbxref=GeneID:4490856;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AHA_3886
NC_008570.1	RefSeq	CDS	4317531	4318814	.	-	0	ID=cds3739;Parent=gene3882;Dbxref=Genbank:YP_858325.1,GeneID:4490856;Name=YP_858325.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=YP_858325.1;transl_table=11
NC_008570.1	RefSeq	gene	4318818	4319900	.	-	.	ID=gene3883;Dbxref=GeneID:4490857;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AHA_3887
NC_008570.1	RefSeq	CDS	4318818	4319900	.	-	0	ID=cds3740;Parent=gene3883;Dbxref=Genbank:YP_858326.1,GeneID:4490857;Name=YP_858326.1;Note=identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_858326.1;transl_table=11
NC_008570.1	RefSeq	gene	4319894	4321249	.	-	.	ID=gene3884;Dbxref=GeneID:4490858;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AHA_3888
NC_008570.1	RefSeq	CDS	4319894	4321249	.	-	0	ID=cds3741;Parent=gene3884;Dbxref=Genbank:YP_858327.1,GeneID:4490858;Name=YP_858327.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01143;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=YP_858327.1;transl_table=11
NC_008570.1	RefSeq	gene	4321246	4322730	.	-	.	ID=gene3885;Dbxref=GeneID:4488201;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AHA_3889
NC_008570.1	RefSeq	CDS	4321246	4322730	.	-	0	ID=cds3742;Parent=gene3885;Dbxref=Genbank:YP_858328.1,GeneID:4488201;Name=YP_858328.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01085;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=YP_858328.1;transl_table=11
NC_008570.1	RefSeq	gene	4322711	4324465	.	-	.	ID=gene3886;Dbxref=GeneID:4488202;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AHA_3890
NC_008570.1	RefSeq	CDS	4322711	4324465	.	-	0	ID=cds3743;Parent=gene3886;Dbxref=Genbank:YP_858329.1,GeneID:4488202;Name=YP_858329.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717;gbkey=CDS;gene=ftsI;product=peptidoglycan synthetase FtsI;protein_id=YP_858329.1;transl_table=11
NC_008570.1	RefSeq	gene	4324462	4324776	.	-	.	ID=gene3887;Dbxref=GeneID:4488203;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AHA_3891
NC_008570.1	RefSeq	CDS	4324462	4324776	.	-	0	ID=cds3744;Parent=gene3887;Dbxref=Genbank:YP_858330.1,GeneID:4488203;Name=YP_858330.1;Note=identified by match to protein family HMM PF04999%3B match to protein family HMM TIGR02209;gbkey=CDS;gene=ftsL;product=cell division protein FtsL;protein_id=YP_858330.1;transl_table=11
NC_008570.1	RefSeq	gene	4324780	4325718	.	-	.	ID=gene3888;Dbxref=GeneID:4488204;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=AHA_3892
NC_008570.1	RefSeq	CDS	4324780	4325718	.	-	0	ID=cds3745;Parent=gene3888;Dbxref=Genbank:YP_858331.1,GeneID:4488204;Name=YP_858331.1;Note=identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=YP_858331.1;transl_table=11
NC_008570.1	RefSeq	gene	4325719	4326177	.	-	.	ID=gene3889;Dbxref=GeneID:4488205;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AHA_3893
NC_008570.1	RefSeq	CDS	4325719	4326177	.	-	0	ID=cds3746;Parent=gene3889;Dbxref=Genbank:YP_858332.1,GeneID:4488205;Name=YP_858332.1;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;gbkey=CDS;gene=mraZ;product=cell division protein MraZ;protein_id=YP_858332.1;transl_table=11
NC_008570.1	RefSeq	gene	4327140	4327973	.	-	.	ID=gene3890;Dbxref=GeneID:4488206;Name=AHA_3894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3894
NC_008570.1	RefSeq	CDS	4327140	4327973	.	-	0	ID=cds3747;Parent=gene3890;Dbxref=Genbank:YP_858333.1,GeneID:4488206;Name=YP_858333.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;product=tetrapyrrole methylase family protein;protein_id=YP_858333.1;transl_table=11
NC_008570.1	RefSeq	gene	4327948	4329960	.	+	.	ID=gene3891;Dbxref=GeneID:4488207;Name=AHA_3895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3895
NC_008570.1	RefSeq	CDS	4327948	4329960	.	+	0	ID=cds3748;Parent=gene3891;Dbxref=Genbank:YP_858334.1,GeneID:4488207;Name=YP_858334.1;Note=identified by match to protein family HMM PF04348;gbkey=CDS;product=LppC superfamily protein;protein_id=YP_858334.1;transl_table=11
NC_008570.1	RefSeq	gene	4329881	4330273	.	+	.	ID=gene3892;Dbxref=GeneID:4488208;Name=AHA_3896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3896
NC_008570.1	RefSeq	CDS	4329881	4330273	.	+	0	ID=cds3749;Parent=gene3892;Dbxref=Genbank:YP_858335.1,GeneID:4488208;Name=YP_858335.1;Note=identified by match to protein family HMM PF02021%3B match to protein family HMM TIGR00252;gbkey=CDS;product=hypothetical protein;protein_id=YP_858335.1;transl_table=11
NC_008570.1	RefSeq	gene	4330283	4330873	.	+	.	ID=gene3893;Dbxref=GeneID:4488209;Name=gmhA-2;gbkey=Gene;gene=gmhA-2;gene_biotype=protein_coding;locus_tag=AHA_3897
NC_008570.1	RefSeq	CDS	4330283	4330873	.	+	0	ID=cds3750;Parent=gene3893;Dbxref=Genbank:YP_858336.1,GeneID:4488209;Name=YP_858336.1;Note=identified by match to protein family HMM TIGR00441;gbkey=CDS;gene=gmhA-2;product=phosphoheptose isomerase;protein_id=YP_858336.1;transl_table=11
NC_008570.1	RefSeq	gene	4330830	4331456	.	+	.	ID=gene3894;Dbxref=GeneID:4488210;Name=AHA_3898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3898
NC_008570.1	RefSeq	CDS	4330830	4331456	.	+	0	ID=cds3751;Parent=gene3894;Dbxref=Genbank:YP_858337.1,GeneID:4488210;Name=YP_858337.1;Note=identified by match to protein family HMM PF04972;gbkey=CDS;product=hypothetical protein;protein_id=YP_858337.1;transl_table=11
NC_008570.1	RefSeq	gene	4331509	4331928	.	-	.	ID=gene3895;Dbxref=GeneID:4488211;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AHA_3899
NC_008570.1	RefSeq	CDS	4331509	4331928	.	-	0	ID=cds3752;Parent=gene3895;Dbxref=Genbank:YP_858338.1,GeneID:4488211;Name=YP_858338.1;Note=identified by similarity to SP:P25663%3B match to protein family HMM PF04386;gbkey=CDS;gene=sspB;product=stringent starvation protein B;protein_id=YP_858338.1;transl_table=11
NC_008570.1	RefSeq	gene	4331931	4332560	.	-	.	ID=gene3896;Dbxref=GeneID:4488212;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AHA_3900
NC_008570.1	RefSeq	CDS	4331931	4332560	.	-	0	ID=cds3753;Parent=gene3896;Dbxref=Genbank:YP_858339.1,GeneID:4488212;Name=YP_858339.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=YP_858339.1;transl_table=11
NC_008570.1	RefSeq	gene	4332648	4333382	.	-	.	ID=gene3897;Dbxref=GeneID:4488213;Name=AHA_3901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3901
NC_008570.1	RefSeq	CDS	4332648	4333382	.	-	0	ID=cds3754;Parent=gene3897;Dbxref=Genbank:YP_858340.1,GeneID:4488213;Name=YP_858340.1;Note=identified by match to protein family HMM PF02167;gbkey=CDS;product=ubiquinol--cytochrome c reductase%2C cytochrome c1;protein_id=YP_858340.1;transl_table=11
NC_008570.1	RefSeq	gene	4333379	4334596	.	-	.	ID=gene3898;Dbxref=GeneID:4488214;Name=petB;gbkey=Gene;gene=petB;gene_biotype=protein_coding;locus_tag=AHA_3902
NC_008570.1	RefSeq	CDS	4333379	4334596	.	-	0	ID=cds3755;Parent=gene3898;Dbxref=Genbank:YP_858341.1,GeneID:4488214;Name=YP_858341.1;Note=identified by match to protein family HMM PF00032%3B match to protein family HMM PF00033;gbkey=CDS;gene=petB;product=ubiquinol-cytochrome c reductase%2C cytochrome b subunit;protein_id=YP_858341.1;transl_table=11
NC_008570.1	RefSeq	gene	4334599	4335189	.	-	.	ID=gene3899;Dbxref=GeneID:4488215;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=AHA_3903
NC_008570.1	RefSeq	CDS	4334599	4335189	.	-	0	ID=cds3756;Parent=gene3899;Dbxref=Genbank:YP_858342.1,GeneID:4488215;Name=YP_858342.1;Note=identified by match to protein family HMM PF00355%3B match to protein family HMM TIGR01416;gbkey=CDS;gene=petA;product=ubiquinol-cytochrome c reductase%2C iron-sulfur subunit;protein_id=YP_858342.1;transl_table=11
NC_008570.1	RefSeq	gene	4335485	4335877	.	-	.	ID=gene3900;Dbxref=GeneID:4488216;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AHA_3904
NC_008570.1	RefSeq	CDS	4335485	4335877	.	-	0	ID=cds3757;Parent=gene3900;Dbxref=Genbank:YP_858343.1,GeneID:4488216;Name=YP_858343.1;Note=forms a direct contact with the tRNA during translation;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=YP_858343.1;transl_table=11
NC_008570.1	RefSeq	gene	4335893	4336321	.	-	.	ID=gene3901;Dbxref=GeneID:4488217;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AHA_3905
NC_008570.1	RefSeq	CDS	4335893	4336321	.	-	0	ID=cds3758;Parent=gene3901;Dbxref=Genbank:YP_858344.1,GeneID:4488217;Name=YP_858344.1;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=YP_858344.1;transl_table=11
NC_008570.1	RefSeq	gene	4336588	4337682	.	-	.	ID=gene3902;Dbxref=GeneID:4488218;Name=AHA_3906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3906
NC_008570.1	RefSeq	CDS	4336588	4337682	.	-	0	ID=cds3759;Parent=gene3902;Dbxref=Genbank:YP_858345.1,GeneID:4488218;Name=YP_858345.1;Note=identified by match to protein family HMM PF03969;gbkey=CDS;product=AFG1 family ATPase;protein_id=YP_858345.1;transl_table=11
NC_008570.1	RefSeq	gene	4337823	4338203	.	+	.	ID=gene3903;Dbxref=GeneID:4488219;Name=AHA_3907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3907
NC_008570.1	RefSeq	CDS	4337823	4338203	.	+	0	ID=cds3760;Parent=gene3903;Dbxref=Genbank:YP_858346.1,GeneID:4488219;Name=YP_858346.1;Note=identified by match to protein family HMM PF06295;gbkey=CDS;product=hypothetical protein;protein_id=YP_858346.1;transl_table=11
NC_008570.1	RefSeq	gene	4338285	4339646	.	+	.	ID=gene3904;Dbxref=GeneID:4488220;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AHA_3908
NC_008570.1	RefSeq	CDS	4338285	4339646	.	+	0	ID=cds3761;Parent=gene3904;Dbxref=Genbank:YP_858347.1,GeneID:4488220;Name=YP_858347.1;Note=identified by similarity to SP:P39099%3B match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037;gbkey=CDS;gene=degQ;product=serine peptidase DegQ;protein_id=YP_858347.1;transl_table=11
NC_008570.1	RefSeq	gene	4339736	4340857	.	+	.	ID=gene3905;Dbxref=GeneID:4486768;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AHA_3909
NC_008570.1	RefSeq	CDS	4339736	4340857	.	+	0	ID=cds3762;Parent=gene3905;Dbxref=Genbank:YP_858348.1,GeneID:4486768;Name=YP_858348.1;Note=identified by similarity to SP:P31137%3B match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02038;gbkey=CDS;gene=degS;product=periplasmic serine peptidase DegS;protein_id=YP_858348.1;transl_table=11
NC_008570.1	RefSeq	gene	4341166	4341528	.	+	.	ID=gene3906;Dbxref=GeneID:4486769;Name=AHA_3910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3910
NC_008570.1	RefSeq	CDS	4341166	4341528	.	+	0	ID=cds3763;Parent=gene3906;Dbxref=Genbank:YP_858349.1,GeneID:4486769;Name=YP_858349.1;Note=identified by match to protein family HMM PF00874;gbkey=CDS;product=transcriptional regulator;protein_id=YP_858349.1;transl_table=11
NC_008570.1	RefSeq	gene	4341529	4341894	.	+	.	ID=gene3907;Dbxref=GeneID:4486770;Name=AHA_3911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3911
NC_008570.1	RefSeq	CDS	4341529	4341894	.	+	0	ID=cds3764;Parent=gene3907;Dbxref=Genbank:YP_858350.1,GeneID:4486770;Name=YP_858350.1;gbkey=CDS;product=transcriptional regulator;protein_id=YP_858350.1;transl_table=11
NC_008570.1	RefSeq	gene	4341894	4342190	.	+	.	ID=gene3908;Dbxref=GeneID:4486771;Name=AHA_3912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3912
NC_008570.1	RefSeq	CDS	4341894	4342190	.	+	0	ID=cds3765;Parent=gene3908;Dbxref=Genbank:YP_858351.1,GeneID:4486771;Name=YP_858351.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858351.1;transl_table=11
NC_008570.1	RefSeq	gene	4342336	4343007	.	+	.	ID=gene3909;Dbxref=GeneID:4486772;Name=AHA_3913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3913
NC_008570.1	RefSeq	CDS	4342336	4343007	.	+	0	ID=cds3766;Parent=gene3909;Dbxref=Genbank:YP_858352.1,GeneID:4486772;Name=YP_858352.1;gbkey=CDS;product=permease;protein_id=YP_858352.1;transl_table=11
NC_008570.1	RefSeq	gene	4343019	4343669	.	+	.	ID=gene3910;Dbxref=GeneID:4486773;Name=AHA_3914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3914
NC_008570.1	RefSeq	CDS	4343019	4343669	.	+	0	ID=cds3767;Parent=gene3910;Dbxref=Genbank:YP_858353.1,GeneID:4486773;Name=YP_858353.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858353.1;transl_table=11
NC_008570.1	RefSeq	gene	4343713	4344852	.	+	.	ID=gene3911;Dbxref=GeneID:4486774;Name=AHA_3915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3915
NC_008570.1	RefSeq	CDS	4343713	4344852	.	+	0	ID=cds3768;Parent=gene3911;Dbxref=Genbank:YP_858354.1,GeneID:4486774;Name=YP_858354.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;product=dihydroorotase;protein_id=YP_858354.1;transl_table=11
NC_008570.1	RefSeq	gene	4344836	4345951	.	+	.	ID=gene3912;Dbxref=GeneID:4486775;Name=AHA_3916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3916
NC_008570.1	RefSeq	CDS	4344836	4345951	.	+	0	ID=cds3769;Parent=gene3912;Dbxref=Genbank:YP_858355.1,GeneID:4486775;Name=YP_858355.1;Note=identified by match to protein family HMM PF01212%3B match to protein family HMM PF03841%3B match to protein family HMM TIGR01437;gbkey=CDS;product=pyridoxal phosphate-dependent enzyme;protein_id=YP_858355.1;transl_table=11
NC_008570.1	RefSeq	gene	4345951	4346691	.	+	.	ID=gene3913;Dbxref=GeneID:4486776;Name=AHA_3917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3917
NC_008570.1	RefSeq	CDS	4345951	4346691	.	+	0	ID=cds3770;Parent=gene3913;Dbxref=Genbank:YP_858356.1,GeneID:4486776;Name=YP_858356.1;Note=identified by match to protein family HMM PF07071;gbkey=CDS;product=4-hydroxy-2-ketovalerate aldolase;protein_id=YP_858356.1;transl_table=11
NC_008570.1	RefSeq	gene	4346796	4348700	.	+	.	ID=gene3914;Dbxref=GeneID:4486777;Name=AHA_3918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3918
NC_008570.1	RefSeq	CDS	4346796	4348700	.	+	0	ID=cds3771;Parent=gene3914;Dbxref=Genbank:YP_858357.1,GeneID:4486777;Name=YP_858357.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874%3B match to protein family HMM PF05043;gbkey=CDS;product=BigG family transcription antiterminator;protein_id=YP_858357.1;transl_table=11
NC_008570.1	RefSeq	gene	4348716	4348988	.	-	.	ID=gene3915;Dbxref=GeneID:4486778;Name=AHA_3919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3919
NC_008570.1	RefSeq	CDS	4348716	4348988	.	-	0	ID=cds3772;Parent=gene3915;Dbxref=Genbank:YP_858358.1,GeneID:4486778;Name=YP_858358.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr);protein_id=YP_858358.1;transl_table=11
NC_008570.1	RefSeq	gene	4349009	4349875	.	-	.	ID=gene3916;Dbxref=GeneID:4486779;Name=AHA_3920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3920
NC_008570.1	RefSeq	CDS	4349009	4349875	.	-	0	ID=cds3773;Parent=gene3916;Dbxref=Genbank:YP_858359.1,GeneID:4486779;Name=YP_858359.1;Note=identified by match to protein family HMM PF03668;gbkey=CDS;product=hypothetical protein;protein_id=YP_858359.1;transl_table=11
NC_008570.1	RefSeq	gene	4349918	4350364	.	-	.	ID=gene3917;Dbxref=GeneID:4486780;Name=AHA_3921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3921
NC_008570.1	RefSeq	CDS	4349918	4350364	.	-	0	ID=cds3774;Parent=gene3917;Dbxref=Genbank:YP_858360.1,GeneID:4486780;Name=YP_858360.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM TIGR01419;gbkey=CDS;product=hypothetical protein;protein_id=YP_858360.1;transl_table=11
NC_008570.1	RefSeq	gene	4350367	4350654	.	-	.	ID=gene3918;Dbxref=GeneID:4486781;Name=yfiA-2;gbkey=Gene;gene=yfiA-2;gene_biotype=protein_coding;locus_tag=AHA_3922
NC_008570.1	RefSeq	CDS	4350367	4350654	.	-	0	ID=cds3775;Parent=gene3918;Dbxref=Genbank:YP_858361.1,GeneID:4486781;Name=YP_858361.1;Note=identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=yfiA-2;product=ribosomal subunit interface protein;protein_id=YP_858361.1;transl_table=11
NC_008570.1	RefSeq	gene	4350676	4352115	.	-	.	ID=gene3919;Dbxref=GeneID:4486782;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AHA_3923
NC_008570.1	RefSeq	CDS	4350676	4352115	.	-	0	ID=cds3776;Parent=gene3919;Dbxref=Genbank:YP_858362.1,GeneID:4486782;Name=YP_858362.1;Note=identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395;gbkey=CDS;gene=rpoN;product=RNA polymerase sigma-54 factor;protein_id=YP_858362.1;transl_table=11
NC_008570.1	RefSeq	gene	4352181	4352906	.	-	.	ID=gene3920;Dbxref=GeneID:4486783;Name=AHA_3924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3924
NC_008570.1	RefSeq	CDS	4352181	4352906	.	-	0	ID=cds3777;Parent=gene3920;Dbxref=Genbank:YP_858363.1,GeneID:4486783;Name=YP_858363.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858363.1;transl_table=11
NC_008570.1	RefSeq	gene	4352910	4353473	.	-	.	ID=gene3921;Dbxref=GeneID:4486784;Name=AHA_3925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3925
NC_008570.1	RefSeq	CDS	4352910	4353473	.	-	0	ID=cds3778;Parent=gene3921;Dbxref=Genbank:YP_858364.1,GeneID:4486784;Name=YP_858364.1;Note=identified by match to protein family HMM PF03968%3B match to protein family HMM TIGR03002;gbkey=CDS;product=protein YhbN;protein_id=YP_858364.1;transl_table=11
NC_008570.1	RefSeq	gene	4353424	4353984	.	-	.	ID=gene3922;Dbxref=GeneID:4486785;Name=AHA_3926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3926
NC_008570.1	RefSeq	CDS	4353424	4353984	.	-	0	ID=cds3779;Parent=gene3922;Dbxref=Genbank:YP_858365.1,GeneID:4486785;Name=YP_858365.1;Note=identified by match to protein family HMM PF06835;gbkey=CDS;product=hypothetical protein;protein_id=YP_858365.1;transl_table=11
NC_008570.1	RefSeq	gene	4353981	4354535	.	-	.	ID=gene3923;Dbxref=GeneID:4486786;Name=AHA_3927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3927
NC_008570.1	RefSeq	CDS	4353981	4354535	.	-	0	ID=cds3780;Parent=gene3923;Dbxref=Genbank:YP_858366.1,GeneID:4486786;Name=YP_858366.1;Note=identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=YP_858366.1;transl_table=11
NC_008570.1	RefSeq	gene	4354535	4355530	.	-	.	ID=gene3924;Dbxref=GeneID:4486748;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AHA_3928
NC_008570.1	RefSeq	CDS	4354535	4355530	.	-	0	ID=cds3781;Parent=gene3924;Dbxref=Genbank:YP_858367.1,GeneID:4486748;Name=YP_858367.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR00393;gbkey=CDS;gene=kdsD;product=arabinose 5-phosphate isomerase;protein_id=YP_858367.1;transl_table=11
NC_008570.1	RefSeq	gene	4355738	4356538	.	+	.	ID=gene3925;Dbxref=GeneID:4486749;Name=AHA_3929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3929
NC_008570.1	RefSeq	CDS	4355738	4356538	.	+	0	ID=cds3782;Parent=gene3925;Dbxref=Genbank:YP_858368.1,GeneID:4486749;Name=YP_858368.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_858368.1;transl_table=11
NC_008570.1	RefSeq	gene	4356538	4357317	.	+	.	ID=gene3926;Dbxref=GeneID:4486750;Name=AHA_3930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3930
NC_008570.1	RefSeq	CDS	4356538	4357317	.	+	0	ID=cds3783;Parent=gene3926;Dbxref=Genbank:YP_858369.1,GeneID:4486750;Name=YP_858369.1;Note=identified by match to protein family HMM PF02405%3B match to protein family HMM TIGR00056;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858369.1;transl_table=11
NC_008570.1	RefSeq	gene	4357325	4357816	.	+	.	ID=gene3927;Dbxref=GeneID:4486751;Name=AHA_3931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3931
NC_008570.1	RefSeq	CDS	4357325	4357816	.	+	0	ID=cds3784;Parent=gene3927;Dbxref=Genbank:YP_858370.1,GeneID:4486751;Name=YP_858370.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;product=Mce family protein;protein_id=YP_858370.1;transl_table=11
NC_008570.1	RefSeq	gene	4357826	4358458	.	+	.	ID=gene3928;Dbxref=GeneID:4486752;Name=ttg2D;gbkey=Gene;gene=ttg2D;gene_biotype=protein_coding;locus_tag=AHA_3932
NC_008570.1	RefSeq	CDS	4357826	4358458	.	+	0	ID=cds3785;Parent=gene3928;Dbxref=Genbank:YP_858371.1,GeneID:4486752;Name=YP_858371.1;Note=identified by match to protein family HMM PF05494;gbkey=CDS;gene=ttg2D;product=toluene tolerance protein Ttg2D;protein_id=YP_858371.1;transl_table=11
NC_008570.1	RefSeq	gene	4358308	4358727	.	+	.	ID=gene3929;Dbxref=GeneID:4486753;Name=AHA_3933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3933
NC_008570.1	RefSeq	CDS	4358308	4358727	.	+	0	ID=cds3786;Parent=gene3929;Dbxref=Genbank:YP_858372.1,GeneID:4486753;Name=YP_858372.1;Note=identified by match to protein family HMM PF01740;gbkey=CDS;product=anti-anti-sigma factor family protein;protein_id=YP_858372.1;transl_table=11
NC_008570.1	RefSeq	gene	4358727	4358984	.	+	.	ID=gene3930;Dbxref=GeneID:4486754;Name=AHA_3934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3934
NC_008570.1	RefSeq	CDS	4358727	4358984	.	+	0	ID=cds3787;Parent=gene3930;Dbxref=Genbank:YP_858373.1,GeneID:4486754;Name=YP_858373.1;Note=identified by match to protein family HMM PF01722;gbkey=CDS;product=BolA/YrbA family protein;protein_id=YP_858373.1;transl_table=11
NC_008570.1	RefSeq	gene	4359002	4360258	.	+	.	ID=gene3931;Dbxref=GeneID:4486755;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AHA_3935
NC_008570.1	RefSeq	CDS	4359002	4360258	.	+	0	ID=cds3788;Parent=gene3931;Dbxref=Genbank:YP_858374.1,GeneID:4486755;Name=YP_858374.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_858374.1;transl_table=11
NC_008570.1	RefSeq	gene	4360344	4361687	.	-	.	ID=gene3932;Dbxref=GeneID:4486756;Name=AHA_3936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3936
NC_008570.1	RefSeq	CDS	4360344	4361687	.	-	0	ID=cds3789;Parent=gene3932;Dbxref=Genbank:YP_858375.1,GeneID:4486756;Name=YP_858375.1;Note=identified by match to protein family HMM PF01523;gbkey=CDS;product=protein PmbA;protein_id=YP_858375.1;transl_table=11
NC_008570.1	RefSeq	gene	4361780	4362325	.	+	.	ID=gene3933;Dbxref=GeneID:4486757;Name=AHA_3937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3937
NC_008570.1	RefSeq	CDS	4361780	4362325	.	+	0	ID=cds3790;Parent=gene3933;Dbxref=Genbank:YP_858376.1,GeneID:4486757;Name=YP_858376.1;Note=identified by match to protein family HMM PF04751;gbkey=CDS;product=hypothetical protein;protein_id=YP_858376.1;transl_table=11
NC_008570.1	RefSeq	gene	4362411	4365494	.	-	.	ID=gene3934;Dbxref=GeneID:4486758;Name=AHA_3938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3938
NC_008570.1	RefSeq	CDS	4362411	4365494	.	-	0	ID=cds3791;Parent=gene3934;Dbxref=Genbank:YP_858377.1,GeneID:4486758;Name=YP_858377.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858377.1;transl_table=11
NC_008570.1	RefSeq	gene	4365711	4366067	.	-	.	ID=gene3935;Dbxref=GeneID:4486759;Name=AHA_3939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3939
NC_008570.1	RefSeq	CDS	4365711	4366067	.	-	0	ID=cds3792;Parent=gene3935;Dbxref=Genbank:YP_858378.1,GeneID:4486759;Name=YP_858378.1;Note=identified by match to protein family HMM PF04363;gbkey=CDS;product=hypothetical protein;protein_id=YP_858378.1;transl_table=11
NC_008570.1	RefSeq	gene	4366322	4366441	.	-	.	ID=gene3936;Dbxref=GeneID:4486760;Name=rrfH;gbkey=Gene;gene=rrfH;gene_biotype=rRNA;locus_tag=AHA_3940
NC_008570.1	RefSeq	rRNA	4366322	4366441	.	-	.	ID=rna139;Parent=gene3936;Dbxref=GeneID:4486760;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	4366322	4366441	.	-	.	ID=id141;Parent=rna139;Dbxref=GeneID:4486760;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	4366517	4369405	.	-	.	ID=gene3937;Dbxref=GeneID:4486761;Name=rrlH;gbkey=Gene;gene=rrlH;gene_biotype=rRNA;locus_tag=AHA_3941
NC_008570.1	RefSeq	rRNA	4366517	4369405	.	-	.	ID=rna140;Parent=gene3937;Dbxref=GeneID:4486761;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	4366517	4369405	.	-	.	ID=id142;Parent=rna140;Dbxref=GeneID:4486761;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	4369644	4369719	.	-	.	ID=gene3938;Dbxref=GeneID:4486762;Name=AHA_3942;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3942
NC_008570.1	RefSeq	tRNA	4369644	4369719	.	-	.	ID=rna141;Parent=gene3938;Dbxref=GeneID:4486762;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	4369644	4369719	.	-	.	ID=id143;Parent=rna141;Dbxref=GeneID:4486762;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	4369730	4369806	.	-	.	ID=gene3939;Dbxref=GeneID:4486763;Name=AHA_3943;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_3943
NC_008570.1	RefSeq	tRNA	4369730	4369806	.	-	.	ID=rna142;Parent=gene3939;Dbxref=GeneID:4486763;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	exon	4369730	4369806	.	-	.	ID=id144;Parent=rna142;Dbxref=GeneID:4486763;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	gene	4369875	4371424	.	-	.	ID=gene3940;Dbxref=GeneID:4486764;Name=rrsH;gbkey=Gene;gene=rrsH;gene_biotype=rRNA;locus_tag=AHA_3944
NC_008570.1	RefSeq	rRNA	4369875	4371424	.	-	.	ID=rna143;Parent=gene3940;Dbxref=GeneID:4486764;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	4369875	4371424	.	-	.	ID=id145;Parent=rna143;Dbxref=GeneID:4486764;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	4371918	4373114	.	+	.	ID=gene3941;Dbxref=GeneID:4486765;Name=AHA_3945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3945
NC_008570.1	RefSeq	CDS	4371918	4373114	.	+	0	ID=cds3793;Parent=gene3941;Dbxref=Genbank:YP_858379.1,GeneID:4486765;Name=YP_858379.1;Note=identified by match to protein family HMM PF05940;gbkey=CDS;product=heme/copper membrane protein;protein_id=YP_858379.1;transl_table=11
NC_008570.1	RefSeq	gene	4373123	4373815	.	-	.	ID=gene3942;Dbxref=GeneID:4486766;Name=AHA_3946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3946
NC_008570.1	RefSeq	CDS	4373123	4373815	.	-	0	ID=cds3794;Parent=gene3942;Dbxref=Genbank:YP_858380.1,GeneID:4486766;Name=YP_858380.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883;gbkey=CDS;product=DNA-binding protein;protein_id=YP_858380.1;transl_table=11
NC_008570.1	RefSeq	gene	4373814	4374965	.	+	.	ID=gene3943;Dbxref=GeneID:4486767;Name=AHA_3947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3947
NC_008570.1	RefSeq	CDS	4373814	4374965	.	+	0	ID=cds3795;Parent=gene3943;Dbxref=Genbank:YP_858381.1,GeneID:4486767;Name=YP_858381.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF03594%3B match to protein family HMM TIGR00843;gbkey=CDS;product=benzoate transporter;protein_id=YP_858381.1;transl_table=11
NC_008570.1	RefSeq	gene	4375116	4376180	.	+	.	ID=gene3944;Dbxref=GeneID:4486746;Name=AHA_3948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3948
NC_008570.1	RefSeq	CDS	4375116	4376180	.	+	0	ID=cds3796;Parent=gene3944;Dbxref=Genbank:YP_858382.1,GeneID:4486746;Name=YP_858382.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858382.1;transl_table=11
NC_008570.1	RefSeq	gene	4376243	4377139	.	-	.	ID=gene3945;Dbxref=GeneID:4486747;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AHA_3949
NC_008570.1	RefSeq	CDS	4376243	4377139	.	-	0	ID=cds3797;Parent=gene3945;Dbxref=Genbank:YP_858383.1,GeneID:4486747;Name=YP_858383.1;Note=identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=YP_858383.1;transl_table=11
NC_008570.1	RefSeq	gene	4377468	4378259	.	+	.	ID=gene3946;Dbxref=GeneID:4488365;Name=AHA_3950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3950
NC_008570.1	RefSeq	CDS	4377468	4378259	.	+	0	ID=cds3798;Parent=gene3946;Dbxref=Genbank:YP_858384.1,GeneID:4488365;Name=YP_858384.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_858384.1;transl_table=11
NC_008570.1	RefSeq	gene	4378323	4379807	.	-	.	ID=gene3947;Dbxref=GeneID:4488366;Name=AHA_3951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3951
NC_008570.1	RefSeq	CDS	4378323	4379807	.	-	0	ID=cds3799;Parent=gene3947;Dbxref=Genbank:YP_858385.1,GeneID:4488366;Name=YP_858385.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=sugar ABC transporter periplasmic protein;protein_id=YP_858385.1;transl_table=11
NC_008570.1	RefSeq	gene	4379816	4381795	.	-	.	ID=gene3948;Dbxref=GeneID:4488367;Name=AHA_3952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3952
NC_008570.1	RefSeq	CDS	4379816	4381795	.	-	0	ID=cds3800;Parent=gene3948;Dbxref=Genbank:YP_858386.1,GeneID:4488367;Name=YP_858386.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858386.1;transl_table=11
NC_008570.1	RefSeq	gene	4382015	4382626	.	-	.	ID=gene3949;Dbxref=GeneID:4488368;Name=AHA_3953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3953
NC_008570.1	RefSeq	CDS	4382015	4382626	.	-	0	ID=cds3801;Parent=gene3949;Dbxref=Genbank:YP_858387.1,GeneID:4488368;Name=YP_858387.1;Note=identified by match to protein family HMM PF03922;gbkey=CDS;product=outer membrane protein W;protein_id=YP_858387.1;transl_table=11
NC_008570.1	RefSeq	gene	4383073	4384620	.	-	.	ID=gene3950;Dbxref=GeneID:4488369;Name=AHA_3954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3954
NC_008570.1	RefSeq	CDS	4383073	4384620	.	-	0	ID=cds3802;Parent=gene3950;Dbxref=Genbank:YP_858388.1,GeneID:4488369;Name=YP_858388.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF00990%3B match to protein family HMM PF05228%3B match to protein family HMM TIGR00254;gbkey=CDS;product=PAS/GGDEF domain-containing protein;protein_id=YP_858388.1;transl_table=11
NC_008570.1	RefSeq	gene	4384899	4387727	.	-	.	ID=gene3951;Dbxref=GeneID:4488370;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AHA_3955
NC_008570.1	RefSeq	CDS	4384899	4387727	.	-	0	ID=cds3803;Parent=gene3951;Dbxref=Genbank:YP_858389.1,GeneID:4488370;Name=YP_858389.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=YP_858389.1;transl_table=11
NC_008570.1	RefSeq	gene	4387822	4388481	.	-	.	ID=gene3952;Dbxref=GeneID:4488371;Name=AHA_3956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3956
NC_008570.1	RefSeq	CDS	4387822	4388481	.	-	0	ID=cds3804;Parent=gene3952;Dbxref=Genbank:YP_858390.1,GeneID:4488371;Name=YP_858390.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=csgAB operon transcriptional regulatory protein;protein_id=YP_858390.1;transl_table=11
NC_008570.1	RefSeq	gene	4389006	4389584	.	+	.	ID=gene3953;Dbxref=GeneID:4488372;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=AHA_3957
NC_008570.1	RefSeq	CDS	4389006	4389584	.	+	0	ID=cds3805;Parent=gene3953;Dbxref=Genbank:YP_858391.1,GeneID:4488372;Name=YP_858391.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;gene=ssb;product=single-strand binding protein;protein_id=YP_858391.1;transl_table=11
NC_008570.1	RefSeq	gene	4389752	4390510	.	+	.	ID=gene3954;Dbxref=GeneID:4488373;Name=AHA_3958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3958
NC_008570.1	RefSeq	CDS	4389752	4390510	.	+	0	ID=cds3806;Parent=gene3954;Dbxref=Genbank:YP_858392.1,GeneID:4488373;Name=YP_858392.1;gbkey=CDS;product=ABC polar amino acid transport system;protein_id=YP_858392.1;transl_table=11
NC_008570.1	RefSeq	gene	4390591	4390713	.	-	.	ID=gene3955;Dbxref=GeneID:4488374;Name=AHA_3959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3959
NC_008570.1	RefSeq	CDS	4390591	4390713	.	-	0	ID=cds3807;Parent=gene3955;Dbxref=Genbank:YP_858393.1,GeneID:4488374;Name=YP_858393.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858393.1;transl_table=11
NC_008570.1	RefSeq	gene	4391167	4392045	.	+	.	ID=gene3956;Dbxref=GeneID:4488375;Name=AHA_3960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3960
NC_008570.1	RefSeq	CDS	4391167	4392045	.	+	0	ID=cds3808;Parent=gene3956;Dbxref=Genbank:YP_858394.1,GeneID:4488375;Name=YP_858394.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;product=cation efflux family protein;protein_id=YP_858394.1;transl_table=11
NC_008570.1	RefSeq	gene	4392210	4392479	.	+	.	ID=gene3957;Dbxref=GeneID:4488376;Name=AHA_3961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3961
NC_008570.1	RefSeq	CDS	4392210	4392479	.	+	0	ID=cds3809;Parent=gene3957;Dbxref=Genbank:YP_858395.1,GeneID:4488376;Name=YP_858395.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858395.1;transl_table=11
NC_008570.1	RefSeq	gene	4392879	4393091	.	+	.	ID=gene3958;Dbxref=GeneID:4488377;Name=AHA_3962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3962
NC_008570.1	RefSeq	CDS	4392879	4393091	.	+	0	ID=cds3810;Parent=gene3958;Dbxref=Genbank:YP_858396.1,GeneID:4488377;Name=YP_858396.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;product=hypothetical protein;protein_id=YP_858396.1;transl_table=11
NC_008570.1	RefSeq	gene	4393500	4395446	.	+	.	ID=gene3959;Dbxref=GeneID:4488378;Name=AHA_3963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3963
NC_008570.1	RefSeq	CDS	4393500	4395446	.	+	0	ID=cds3811;Parent=gene3959;Dbxref=Genbank:YP_858397.1,GeneID:4488378;Name=YP_858397.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=outer membrane receptor;protein_id=YP_858397.1;transl_table=11
NC_008570.1	RefSeq	gene	4395481	4396968	.	-	.	ID=gene3960;Dbxref=GeneID:4488379;Name=AHA_3964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3964
NC_008570.1	RefSeq	CDS	4395481	4396968	.	-	0	ID=cds3812;Parent=gene3960;Dbxref=Genbank:YP_858398.1,GeneID:4488379;Name=YP_858398.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_858398.1;transl_table=11
NC_008570.1	RefSeq	gene	4397072	4398463	.	-	.	ID=gene3961;Dbxref=GeneID:4488380;Name=AHA_3965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3965
NC_008570.1	RefSeq	CDS	4397072	4398463	.	-	0	ID=cds3813;Parent=gene3961;Dbxref=Genbank:YP_858399.1,GeneID:4488380;Name=YP_858399.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_858399.1;transl_table=11
NC_008570.1	RefSeq	gene	4398468	4399190	.	-	.	ID=gene3962;Dbxref=GeneID:4488381;Name=AHA_3966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3966
NC_008570.1	RefSeq	CDS	4398468	4399190	.	-	0	ID=cds3814;Parent=gene3962;Dbxref=Genbank:YP_858400.1,GeneID:4488381;Name=YP_858400.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=DNA-binding response regulator;protein_id=YP_858400.1;transl_table=11
NC_008570.1	RefSeq	gene	4399633	4399959	.	+	.	ID=gene3963;Dbxref=GeneID:4488382;Name=AHA_3967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3967
NC_008570.1	RefSeq	CDS	4399633	4399959	.	+	0	ID=cds3815;Parent=gene3963;Dbxref=Genbank:YP_858401.1,GeneID:4488382;Name=YP_858401.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858401.1;transl_table=11
NC_008570.1	RefSeq	gene	4400179	4400529	.	+	.	ID=gene3964;Dbxref=GeneID:4488383;Name=AHA_3968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3968
NC_008570.1	RefSeq	CDS	4400179	4400529	.	+	0	ID=cds3816;Parent=gene3964;Dbxref=Genbank:YP_858402.1,GeneID:4488383;Name=YP_858402.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858402.1;transl_table=11
NC_008570.1	RefSeq	gene	4400588	4401007	.	-	.	ID=gene3965;Dbxref=GeneID:4489794;Name=AHA_3969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3969
NC_008570.1	RefSeq	CDS	4400588	4401007	.	-	0	ID=cds3817;Parent=gene3965;Dbxref=Genbank:YP_858403.1,GeneID:4489794;Name=YP_858403.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858403.1;transl_table=11
NC_008570.1	RefSeq	gene	4401167	4402168	.	-	.	ID=gene3966;Dbxref=GeneID:4489795;Name=AHA_3970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3970
NC_008570.1	RefSeq	CDS	4401167	4402168	.	-	0	ID=cds3818;Parent=gene3966;Dbxref=Genbank:YP_858404.1,GeneID:4489795;Name=YP_858404.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254;gbkey=CDS;product=sensory box protein;protein_id=YP_858404.1;transl_table=11
NC_008570.1	RefSeq	gene	4402357	4403262	.	-	.	ID=gene3967;Dbxref=GeneID:4489796;Name=AHA_3971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3971
NC_008570.1	RefSeq	CDS	4402357	4403262	.	-	0	ID=cds3819;Parent=gene3967;Dbxref=Genbank:YP_858405.1,GeneID:4489796;Name=YP_858405.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_858405.1;transl_table=11
NC_008570.1	RefSeq	gene	4403341	4403739	.	+	.	ID=gene3968;Dbxref=GeneID:4489797;Name=AHA_3972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3972
NC_008570.1	RefSeq	CDS	4403341	4403739	.	+	0	ID=cds3820;Parent=gene3968;Dbxref=Genbank:YP_858406.1,GeneID:4489797;Name=YP_858406.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=lactoylglutathione lyase;protein_id=YP_858406.1;transl_table=11
NC_008570.1	RefSeq	gene	4403945	4404991	.	+	.	ID=gene3969;Dbxref=GeneID:4489798;Name=AHA_3973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3973
NC_008570.1	RefSeq	CDS	4403945	4404991	.	+	0	ID=cds3821;Parent=gene3969;Dbxref=Genbank:YP_858407.1,GeneID:4489798;Name=YP_858407.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858407.1;transl_table=11
NC_008570.1	RefSeq	gene	4405048	4407102	.	-	.	ID=gene3970;Dbxref=GeneID:4489799;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AHA_3974
NC_008570.1	RefSeq	CDS	4405048	4407102	.	-	0	ID=cds3822;Parent=gene3970;Dbxref=Genbank:YP_858408.1,GeneID:4489799;Name=YP_858408.1;Note=identified by match to protein family HMM TIGR01447;gbkey=CDS;gene=recD;product=exodeoxyribonuclease V subunit alpha;protein_id=YP_858408.1;transl_table=11
NC_008570.1	RefSeq	gene	4407099	4410716	.	-	.	ID=gene3971;Dbxref=GeneID:4489800;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AHA_3975
NC_008570.1	RefSeq	CDS	4407099	4410716	.	-	0	ID=cds3823;Parent=gene3971;Dbxref=Genbank:YP_858409.1,GeneID:4489800;Name=YP_858409.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR00609;gbkey=CDS;gene=recB;product=exodeoxyribonuclease V subunit beta;protein_id=YP_858409.1;transl_table=11
NC_008570.1	RefSeq	gene	4410716	4414066	.	-	.	ID=gene3972;Dbxref=GeneID:4489801;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AHA_3976
NC_008570.1	RefSeq	CDS	4410716	4414066	.	-	0	ID=cds3824;Parent=gene3972;Dbxref=Genbank:YP_858410.1,GeneID:4489801;Name=YP_858410.1;Note=identified by match to protein family HMM PF04257%3B match to protein family HMM TIGR01450;gbkey=CDS;gene=recC;product=exodeoxyribonuclease V subunit gamma;protein_id=YP_858410.1;transl_table=11
NC_008570.1	RefSeq	gene	4414295	4414762	.	-	.	ID=gene3973;Dbxref=GeneID:4489802;Name=AHA_3977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3977
NC_008570.1	RefSeq	CDS	4414295	4414762	.	-	0	ID=cds3825;Parent=gene3973;Dbxref=Genbank:YP_858411.1,GeneID:4489802;Name=YP_858411.1;Note=identified by match to protein family HMM PF07681;gbkey=CDS;product=inner membrane protein YqjF;protein_id=YP_858411.1;transl_table=11
NC_008570.1	RefSeq	gene	4414728	4415414	.	-	.	ID=gene3974;Dbxref=GeneID:4489803;Name=AHA_3978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3978
NC_008570.1	RefSeq	CDS	4414728	4415414	.	-	0	ID=cds3826;Parent=gene3974;Dbxref=Genbank:YP_858412.1,GeneID:4489803;Name=YP_858412.1;Note=identified by match to protein family HMM PF02678%3B match to protein family HMM PF07883;gbkey=CDS;product=cupin domain-containing protein;protein_id=YP_858412.1;transl_table=11
NC_008570.1	RefSeq	gene	4415445	4415777	.	-	.	ID=gene3975;Dbxref=GeneID:4489804;Name=AHA_3979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3979
NC_008570.1	RefSeq	CDS	4415445	4415777	.	-	0	ID=cds3827;Parent=gene3975;Dbxref=Genbank:YP_858413.1,GeneID:4489804;Name=YP_858413.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858413.1;transl_table=11
NC_008570.1	RefSeq	gene	4416035	4416949	.	+	.	ID=gene3976;Dbxref=GeneID:4489805;Name=AHA_3980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3980
NC_008570.1	RefSeq	CDS	4416035	4416949	.	+	0	ID=cds3828;Parent=gene3976;Dbxref=Genbank:YP_858414.1,GeneID:4489805;Name=YP_858414.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=HTH-type transcriptional regulator YeeY;protein_id=YP_858414.1;transl_table=11
NC_008570.1	RefSeq	gene	4417401	4418165	.	+	.	ID=gene3977;Dbxref=GeneID:4489806;Name=AHA_3981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3981
NC_008570.1	RefSeq	CDS	4417401	4418165	.	+	0	ID=cds3829;Parent=gene3977;Dbxref=Genbank:YP_858415.1,GeneID:4489806;Name=YP_858415.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858415.1;transl_table=11
NC_008570.1	RefSeq	gene	4418232	4419038	.	-	.	ID=gene3978;Dbxref=GeneID:4489807;Name=AHA_3982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3982
NC_008570.1	RefSeq	CDS	4418232	4419038	.	-	0	ID=cds3830;Parent=gene3978;Dbxref=Genbank:YP_858416.1,GeneID:4489807;Name=YP_858416.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_858416.1;transl_table=11
NC_008570.1	RefSeq	gene	4419389	4420312	.	+	.	ID=gene3979;Dbxref=GeneID:4489808;Name=AHA_3983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3983
NC_008570.1	RefSeq	CDS	4419389	4420312	.	+	0	ID=cds3831;Parent=gene3979;Dbxref=Genbank:YP_858417.1,GeneID:4489808;Name=YP_858417.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_858417.1;transl_table=11
NC_008570.1	RefSeq	gene	4420383	4421156	.	+	.	ID=gene3980;Dbxref=GeneID:4489809;Name=AHA_3984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3984
NC_008570.1	RefSeq	CDS	4420383	4421156	.	+	0	ID=cds3832;Parent=gene3980;Dbxref=Genbank:YP_858418.1,GeneID:4489809;Name=YP_858418.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858418.1;transl_table=11
NC_008570.1	RefSeq	gene	4421156	4422055	.	+	.	ID=gene3981;Dbxref=GeneID:4489810;Name=AHA_3985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3985
NC_008570.1	RefSeq	CDS	4421156	4422055	.	+	0	ID=cds3833;Parent=gene3981;Dbxref=Genbank:YP_858419.1,GeneID:4489810;Name=YP_858419.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858419.1;transl_table=11
NC_008570.1	RefSeq	gene	4422048	4422824	.	+	.	ID=gene3982;Dbxref=GeneID:4489811;Name=AHA_3986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3986
NC_008570.1	RefSeq	CDS	4422048	4422824	.	+	0	ID=cds3834;Parent=gene3982;Dbxref=Genbank:YP_858420.1,GeneID:4489811;Name=YP_858420.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=YP_858420.1;transl_table=11
NC_008570.1	RefSeq	gene	4422831	4423838	.	+	.	ID=gene3983;Dbxref=GeneID:4489812;Name=AHA_3987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3987
NC_008570.1	RefSeq	CDS	4422831	4423838	.	+	0	ID=cds3835;Parent=gene3983;Dbxref=Genbank:YP_858421.1,GeneID:4489812;Name=YP_858421.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=YP_858421.1;transl_table=11
NC_008570.1	RefSeq	gene	4423878	4424537	.	+	.	ID=gene3984;Dbxref=GeneID:4489813;Name=AHA_3988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3988
NC_008570.1	RefSeq	CDS	4423878	4424537	.	+	0	ID=cds3836;Parent=gene3984;Dbxref=Genbank:YP_858422.1,GeneID:4489813;Name=YP_858422.1;Note=identified by match to protein family HMM TIGR01488%3B match to protein family HMM TIGR01490;gbkey=CDS;product=HAD family hydrolase;protein_id=YP_858422.1;transl_table=11
NC_008570.1	RefSeq	gene	4424553	4426163	.	-	.	ID=gene3985;Dbxref=GeneID:4488182;Name=AHA_3989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3989
NC_008570.1	RefSeq	CDS	4424553	4426163	.	-	0	ID=cds3837;Parent=gene3985;Dbxref=Genbank:YP_858423.1,GeneID:4488182;Name=YP_858423.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM PF02743%3B match to protein family HMM TIGR00254;gbkey=CDS;product=hypothetical protein;protein_id=YP_858423.1;transl_table=11
NC_008570.1	RefSeq	gene	4426273	4426713	.	+	.	ID=gene3986;Dbxref=GeneID:4488183;Name=AHA_3990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3990
NC_008570.1	RefSeq	CDS	4426273	4426713	.	+	0	ID=cds3838;Parent=gene3986;Dbxref=Genbank:YP_858424.1,GeneID:4488183;Name=YP_858424.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858424.1;transl_table=11
NC_008570.1	RefSeq	gene	4426861	4427760	.	+	.	ID=gene3987;Dbxref=GeneID:4488184;Name=AHA_3991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3991
NC_008570.1	RefSeq	CDS	4426861	4427760	.	+	0	ID=cds3839;Parent=gene3987;Dbxref=Genbank:YP_858425.1,GeneID:4488184;Name=YP_858425.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=transporter;protein_id=YP_858425.1;transl_table=11
NC_008570.1	RefSeq	gene	4427953	4428810	.	-	.	ID=gene3988;Dbxref=GeneID:4488185;Name=AHA_3992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3992
NC_008570.1	RefSeq	CDS	4427953	4428810	.	-	0	ID=cds3840;Parent=gene3988;Dbxref=Genbank:YP_858426.1,GeneID:4488185;Name=YP_858426.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445;gbkey=CDS;product=DNA gyrase inhibitor;protein_id=YP_858426.1;transl_table=11
NC_008570.1	RefSeq	gene	4428807	4429292	.	-	.	ID=gene3989;Dbxref=GeneID:4488186;Name=AHA_3993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3993
NC_008570.1	RefSeq	CDS	4428807	4429292	.	-	0	ID=cds3841;Parent=gene3989;Dbxref=Genbank:YP_858427.1,GeneID:4488186;Name=YP_858427.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=YP_858427.1;transl_table=11
NC_008570.1	RefSeq	gene	4429456	4430904	.	+	.	ID=gene3990;Dbxref=GeneID:4488187;Name=AHA_3994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3994
NC_008570.1	RefSeq	CDS	4429456	4430904	.	+	0	ID=cds3842;Parent=gene3990;Dbxref=Genbank:YP_858428.1,GeneID:4488187;Name=YP_858428.1;Note=identified by match to protein family HMM PF00199;gbkey=CDS;product=catalase;protein_id=YP_858428.1;transl_table=11
NC_008570.1	RefSeq	gene	4431375	4431701	.	-	.	ID=gene3991;Dbxref=GeneID:4488188;Name=AHA_3995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3995
NC_008570.1	RefSeq	CDS	4431375	4431701	.	-	0	ID=cds3843;Parent=gene3991;Dbxref=Genbank:YP_858429.1,GeneID:4488188;Name=YP_858429.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858429.1;transl_table=11
NC_008570.1	RefSeq	gene	4431917	4433155	.	+	.	ID=gene3992;Dbxref=GeneID:4488189;Name=AHA_3996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3996
NC_008570.1	RefSeq	CDS	4431917	4433155	.	+	0	ID=cds3844;Parent=gene3992;Dbxref=Genbank:YP_858430.1,GeneID:4488189;Name=YP_858430.1;Note=identified by similarity to GB:AAN54257.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858430.1;transl_table=11
NC_008570.1	RefSeq	gene	4433315	4434088	.	+	.	ID=gene3993;Dbxref=GeneID:4488190;Name=AHA_3997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3997
NC_008570.1	RefSeq	CDS	4433315	4434088	.	+	0	ID=cds3845;Parent=gene3993;Dbxref=Genbank:YP_858431.1,GeneID:4488190;Name=YP_858431.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_858431.1;transl_table=11
NC_008570.1	RefSeq	gene	4434143	4434595	.	-	.	ID=gene3994;Dbxref=GeneID:4488191;Name=AHA_3998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3998
NC_008570.1	RefSeq	CDS	4434143	4434595	.	-	0	ID=cds3846;Parent=gene3994;Dbxref=Genbank:YP_858432.1,GeneID:4488191;Name=YP_858432.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858432.1;transl_table=11
NC_008570.1	RefSeq	gene	4434721	4436100	.	+	.	ID=gene3995;Dbxref=GeneID:4488192;Name=AHA_3999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_3999
NC_008570.1	RefSeq	CDS	4434721	4436100	.	+	0	ID=cds3847;Parent=gene3995;Dbxref=Genbank:YP_858433.1,GeneID:4488192;Name=YP_858433.1;Note=identified by match to protein family HMM PF00293%3B match to protein family HMM PF01569;gbkey=CDS;product=PAP2 superfamily protein;protein_id=YP_858433.1;transl_table=11
NC_008570.1	RefSeq	gene	4436103	4437182	.	+	.	ID=gene3996;Dbxref=GeneID:4488193;Name=AHA_4000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4000
NC_008570.1	RefSeq	CDS	4436103	4437182	.	+	0	ID=cds3848;Parent=gene3996;Dbxref=Genbank:YP_858434.1,GeneID:4488193;Name=YP_858434.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;product=hypothetical protein;protein_id=YP_858434.1;transl_table=11
NC_008570.1	RefSeq	gene	4437421	4438632	.	-	.	ID=gene3997;Dbxref=GeneID:4488194;Name=AHA_4001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4001
NC_008570.1	RefSeq	CDS	4437421	4438632	.	-	0	ID=cds3849;Parent=gene3997;Dbxref=Genbank:YP_858435.1,GeneID:4488194;Name=YP_858435.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858435.1;transl_table=11
NC_008570.1	RefSeq	gene	4439021	4440139	.	-	.	ID=gene3998;Dbxref=GeneID:4488195;Name=AHA_4002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4002
NC_008570.1	RefSeq	CDS	4439021	4440139	.	-	0	ID=cds3850;Parent=gene3998;Dbxref=Genbank:YP_858436.1,GeneID:4488195;Name=YP_858436.1;Note=identified by match to protein family HMM PF04371%3B match to protein family HMM TIGR01409;gbkey=CDS;product=agmatine deiminase;protein_id=YP_858436.1;transl_table=11
NC_008570.1	RefSeq	gene	4440307	4441200	.	+	.	ID=gene3999;Dbxref=GeneID:4488196;Name=AHA_4003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4003
NC_008570.1	RefSeq	CDS	4440307	4441200	.	+	0	ID=cds3851;Parent=gene3999;Dbxref=Genbank:YP_858437.1,GeneID:4488196;Name=YP_858437.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=regulatory protein LysR;protein_id=YP_858437.1;transl_table=11
NC_008570.1	RefSeq	gene	4441289	4443178	.	+	.	ID=gene4000;Dbxref=GeneID:4488197;Name=AHA_4004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4004
NC_008570.1	RefSeq	CDS	4441289	4443178	.	+	0	ID=cds3852;Parent=gene4000;Dbxref=Genbank:YP_858438.1,GeneID:4488197;Name=YP_858438.1;Note=Positively regulates the dhaKLM operon from a sigma-70 promoter;gbkey=CDS;product=DNA-binding transcriptional regulator DhaR;protein_id=YP_858438.1;transl_table=11
NC_008570.1	RefSeq	gene	4443274	4444356	.	-	.	ID=gene4001;Dbxref=GeneID:4488198;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AHA_4005
NC_008570.1	RefSeq	CDS	4443274	4444356	.	-	0	ID=cds3853;Parent=gene4001;Dbxref=Genbank:YP_858439.1,GeneID:4488198;Name=YP_858439.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=YP_858439.1;transl_table=11
NC_008570.1	RefSeq	gene	4444495	4445211	.	-	.	ID=gene4002;Dbxref=GeneID:4488199;Name=AHA_4006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4006
NC_008570.1	RefSeq	CDS	4444495	4445211	.	-	0	ID=cds3854;Parent=gene4002;Dbxref=Genbank:YP_858440.1,GeneID:4488199;Name=YP_858440.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM PF03610%3B match to protein family HMM TIGR01003%3B match to protein family HMM TIGR02364;gbkey=CDS;product=PTS-dependent dihydroxyacetone kinase%2C phosphotransferase subunit DhaM;protein_id=YP_858440.1;transl_table=11
NC_008570.1	RefSeq	gene	4445213	4445842	.	-	.	ID=gene4003;Dbxref=GeneID:4488200;Name=AHA_4007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4007
NC_008570.1	RefSeq	CDS	4445213	4445842	.	-	0	ID=cds3855;Parent=gene4003;Dbxref=Genbank:YP_858441.1,GeneID:4488200;Name=YP_858441.1;Note=with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaL;protein_id=YP_858441.1;transl_table=11
NC_008570.1	RefSeq	gene	4445858	4446928	.	-	.	ID=gene4004;Dbxref=GeneID:4487329;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AHA_4008
NC_008570.1	RefSeq	CDS	4445858	4446928	.	-	0	ID=cds3856;Parent=gene4004;Dbxref=Genbank:YP_858442.1,GeneID:4487329;Name=YP_858442.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;gene=dhaK;product=dihydroxyacetone kinase subunit DhaK;protein_id=YP_858442.1;transl_table=11
NC_008570.1	RefSeq	gene	4447160	4448503	.	-	.	ID=gene4005;Dbxref=GeneID:4487330;Name=AHA_4009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4009
NC_008570.1	RefSeq	CDS	4447160	4448503	.	-	0	ID=cds3857;Parent=gene4005;Dbxref=Genbank:YP_858443.1,GeneID:4487330;Name=YP_858443.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916;gbkey=CDS;product=inner membrane protein YjcD;protein_id=YP_858443.1;transl_table=11
NC_008570.1	RefSeq	gene	4448745	4449077	.	+	.	ID=gene4006;Dbxref=GeneID:4487331;Name=AHA_4010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4010
NC_008570.1	RefSeq	CDS	4448745	4449077	.	+	0	ID=cds3858;Parent=gene4006;Dbxref=Genbank:YP_858444.1,GeneID:4487331;Name=YP_858444.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_858444.1;transl_table=11
NC_008570.1	RefSeq	gene	4449170	4449246	.	-	.	ID=gene4007;Dbxref=GeneID:4487332;Name=AHA_4011;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4011
NC_008570.1	RefSeq	tRNA	4449170	4449246	.	-	.	ID=rna144;Parent=gene4007;Dbxref=GeneID:4487332;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	exon	4449170	4449246	.	-	.	ID=id146;Parent=rna144;Dbxref=GeneID:4487332;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	gene	4449344	4449463	.	-	.	ID=gene4008;Dbxref=GeneID:4487333;Name=rrfI;gbkey=Gene;gene=rrfI;gene_biotype=rRNA;locus_tag=AHA_4012
NC_008570.1	RefSeq	rRNA	4449344	4449463	.	-	.	ID=rna145;Parent=gene4008;Dbxref=GeneID:4487333;gbkey=rRNA;gene=rrfI;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	4449344	4449463	.	-	.	ID=id147;Parent=rna145;Dbxref=GeneID:4487333;gbkey=rRNA;gene=rrfI;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	4449539	4452427	.	-	.	ID=gene4009;Dbxref=GeneID:4487334;Name=rrlI;gbkey=Gene;gene=rrlI;gene_biotype=rRNA;locus_tag=AHA_4013
NC_008570.1	RefSeq	rRNA	4449539	4452427	.	-	.	ID=rna146;Parent=gene4009;Dbxref=GeneID:4487334;gbkey=rRNA;gene=rrlI;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	4449539	4452427	.	-	.	ID=id148;Parent=rna146;Dbxref=GeneID:4487334;gbkey=rRNA;gene=rrlI;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	4452666	4452741	.	-	.	ID=gene4010;Dbxref=GeneID:4487335;Name=AHA_4014;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4014
NC_008570.1	RefSeq	tRNA	4452666	4452741	.	-	.	ID=rna147;Parent=gene4010;Dbxref=GeneID:4487335;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	exon	4452666	4452741	.	-	.	ID=id149;Parent=rna147;Dbxref=GeneID:4487335;gbkey=tRNA;product=tRNA-Ala
NC_008570.1	RefSeq	gene	4452752	4452828	.	-	.	ID=gene4011;Dbxref=GeneID:4487336;Name=AHA_4015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4015
NC_008570.1	RefSeq	tRNA	4452752	4452828	.	-	.	ID=rna148;Parent=gene4011;Dbxref=GeneID:4487336;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	exon	4452752	4452828	.	-	.	ID=id150;Parent=rna148;Dbxref=GeneID:4487336;gbkey=tRNA;product=tRNA-Ile
NC_008570.1	RefSeq	gene	4452897	4454446	.	-	.	ID=gene4012;Dbxref=GeneID:4487337;Name=rrsI;gbkey=Gene;gene=rrsI;gene_biotype=rRNA;locus_tag=AHA_4016
NC_008570.1	RefSeq	rRNA	4452897	4454446	.	-	.	ID=rna149;Parent=gene4012;Dbxref=GeneID:4487337;gbkey=rRNA;gene=rrsI;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	4452897	4454446	.	-	.	ID=id151;Parent=rna149;Dbxref=GeneID:4487337;gbkey=rRNA;gene=rrsI;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	4454846	4455427	.	-	.	ID=gene4013;Dbxref=GeneID:4487338;Name=AHA_4017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4017
NC_008570.1	RefSeq	CDS	4454846	4455427	.	-	0	ID=cds3859;Parent=gene4013;Dbxref=Genbank:YP_858445.1,GeneID:4487338;Name=YP_858445.1;Note=identified by match to protein family HMM TIGR00213%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=YP_858445.1;transl_table=11
NC_008570.1	RefSeq	gene	4455501	4456685	.	-	.	ID=gene4014;Dbxref=GeneID:4487339;Name=tuf-1;gbkey=Gene;gene=tuf-1;gene_biotype=protein_coding;gene_synonym=tuf;locus_tag=AHA_4018
NC_008570.1	RefSeq	CDS	4455501	4456685	.	-	0	ID=cds3860;Parent=gene4014;Dbxref=Genbank:YP_858446.1,GeneID:4487339;Name=YP_858446.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf-1;product=elongation factor Tu;protein_id=YP_858446.1;transl_table=11
NC_008570.1	RefSeq	gene	4456740	4458845	.	-	.	ID=gene4015;Dbxref=GeneID:4487340;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AHA_4019
NC_008570.1	RefSeq	CDS	4456740	4458845	.	-	0	ID=cds3861;Parent=gene4015;Dbxref=Genbank:YP_858447.1,GeneID:4487340;Name=YP_858447.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=YP_858447.1;transl_table=11
NC_008570.1	RefSeq	gene	4458921	4459391	.	-	.	ID=gene4016;Dbxref=GeneID:4487341;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AHA_4020
NC_008570.1	RefSeq	CDS	4458921	4459391	.	-	0	ID=cds3862;Parent=gene4016;Dbxref=Genbank:YP_858448.1,GeneID:4487341;Name=YP_858448.1;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=YP_858448.1;transl_table=11
NC_008570.1	RefSeq	gene	4459485	4459859	.	-	.	ID=gene4017;Dbxref=GeneID:4487342;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AHA_4021
NC_008570.1	RefSeq	CDS	4459485	4459859	.	-	0	ID=cds3863;Parent=gene4017;Dbxref=Genbank:YP_858449.1,GeneID:4487342;Name=YP_858449.1;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=YP_858449.1;transl_table=11
NC_008570.1	RefSeq	gene	4460043	4460351	.	-	.	ID=gene4018;Dbxref=GeneID:4487343;Name=AHA_4022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4022
NC_008570.1	RefSeq	CDS	4460043	4460351	.	-	0	ID=cds3864;Parent=gene4018;Dbxref=Genbank:YP_858450.1,GeneID:4487343;Name=YP_858450.1;Note=identified by match to protein family HMM TIGR03011;gbkey=CDS;product=hypothetical protein;protein_id=YP_858450.1;transl_table=11
NC_008570.1	RefSeq	gene	4460329	4460685	.	-	.	ID=gene4019;Dbxref=GeneID:4487344;Name=AHA_4023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4023
NC_008570.1	RefSeq	CDS	4460329	4460685	.	-	0	ID=cds3865;Parent=gene4019;Dbxref=Genbank:YP_858451.1,GeneID:4487344;Name=YP_858451.1;Note=identified by match to protein family HMM PF02635%3B match to protein family HMM TIGR03010;gbkey=CDS;product=DsrF protein;protein_id=YP_858451.1;transl_table=11
NC_008570.1	RefSeq	gene	4460695	4461087	.	-	.	ID=gene4020;Dbxref=GeneID:4487345;Name=AHA_4024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4024
NC_008570.1	RefSeq	CDS	4460695	4461087	.	-	0	ID=cds3866;Parent=gene4020;Dbxref=Genbank:YP_858452.1,GeneID:4487345;Name=YP_858452.1;Note=identified by match to protein family HMM PF02635%3B match to protein family HMM TIGR03012;gbkey=CDS;product=intracellular sulfur oxidation protein DsrE;protein_id=YP_858452.1;transl_table=11
NC_008570.1	RefSeq	gene	4461174	4461554	.	-	.	ID=gene4021;Dbxref=GeneID:4487346;Name=AHA_4025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4025
NC_008570.1	RefSeq	CDS	4461174	4461554	.	-	0	ID=cds3867;Parent=gene4021;Dbxref=Genbank:YP_858453.1,GeneID:4487346;Name=YP_858453.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=YP_858453.1;transl_table=11
NC_008570.1	RefSeq	gene	4461580	4462296	.	-	.	ID=gene4022;Dbxref=GeneID:4487347;Name=AHA_4026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4026
NC_008570.1	RefSeq	CDS	4461580	4462296	.	-	0	ID=cds3868;Parent=gene4022;Dbxref=Genbank:YP_858454.1,GeneID:4487347;Name=YP_858454.1;gbkey=CDS;product=MukF protein;protein_id=YP_858454.1;transl_table=11
NC_008570.1	RefSeq	gene	4462494	4466798	.	-	.	ID=gene4023;Dbxref=GeneID:4487348;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AHA_4027
NC_008570.1	RefSeq	CDS	4462494	4466798	.	-	0	ID=cds3869;Parent=gene4023;Dbxref=Genbank:YP_858455.1,GeneID:4487348;Name=YP_858455.1;Note=identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta';protein_id=YP_858455.1;transl_table=11
NC_008570.1	RefSeq	gene	4466890	4470981	.	-	.	ID=gene4024;Dbxref=GeneID:4488027;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AHA_4028
NC_008570.1	RefSeq	CDS	4466890	4470981	.	-	0	ID=cds3870;Parent=gene4024;Dbxref=Genbank:YP_858456.1,GeneID:4488027;Name=YP_858456.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_858456.1;transl_table=11
NC_008570.1	RefSeq	gene	4471143	4471508	.	-	.	ID=gene4025;Dbxref=GeneID:4488028;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AHA_4029
NC_008570.1	RefSeq	CDS	4471143	4471508	.	-	0	ID=cds3871;Parent=gene4025;Dbxref=Genbank:YP_858457.1,GeneID:4488028;Name=YP_858457.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=YP_858457.1;transl_table=11
NC_008570.1	RefSeq	gene	4471560	4472060	.	-	.	ID=gene4026;Dbxref=GeneID:4488029;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AHA_4030
NC_008570.1	RefSeq	CDS	4471560	4472060	.	-	0	ID=cds3872;Parent=gene4026;Dbxref=Genbank:YP_858458.1,GeneID:4488029;Name=YP_858458.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=YP_858458.1;transl_table=11
NC_008570.1	RefSeq	gene	4472317	4473018	.	-	.	ID=gene4027;Dbxref=GeneID:4488030;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AHA_4031
NC_008570.1	RefSeq	CDS	4472317	4473018	.	-	0	ID=cds3873;Parent=gene4027;Dbxref=Genbank:YP_858459.1,GeneID:4488030;Name=YP_858459.1;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=YP_858459.1;transl_table=11
NC_008570.1	RefSeq	gene	4473023	4473451	.	-	.	ID=gene4028;Dbxref=GeneID:4488031;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AHA_4032
NC_008570.1	RefSeq	CDS	4473023	4473451	.	-	0	ID=cds3874;Parent=gene4028;Dbxref=Genbank:YP_858460.1,GeneID:4488031;Name=YP_858460.1;Note=binds directly to 23S ribosomal RNA;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=YP_858460.1;transl_table=11
NC_008570.1	RefSeq	gene	4473585	4474136	.	-	.	ID=gene4029;Dbxref=GeneID:4488032;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AHA_4033
NC_008570.1	RefSeq	CDS	4473585	4474136	.	-	0	ID=cds3875;Parent=gene4029;Dbxref=Genbank:YP_858461.1,GeneID:4488032;Name=YP_858461.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;product=transcription termination/antitermination factor NusG;protein_id=YP_858461.1;transl_table=11
NC_008570.1	RefSeq	gene	4474146	4474517	.	-	.	ID=gene4030;Dbxref=GeneID:4488033;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AHA_4034
NC_008570.1	RefSeq	CDS	4474146	4474517	.	-	0	ID=cds3876;Parent=gene4030;Dbxref=Genbank:YP_858462.1,GeneID:4488033;Name=YP_858462.1;Note=identified by similarity to SP:P16920%3B match to protein family HMM PF00584%3B match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;product=Preprotein translocase subunit SecE;protein_id=YP_858462.1;transl_table=11
NC_008570.1	RefSeq	gene	4474578	4474654	.	-	.	ID=gene4031;Dbxref=GeneID:4488034;Name=AHA_4035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4035
NC_008570.1	RefSeq	tRNA	4474578	4474654	.	-	.	ID=rna150;Parent=gene4031;Dbxref=GeneID:4488034;gbkey=tRNA;product=tRNA-Trp
NC_008570.1	RefSeq	exon	4474578	4474654	.	-	.	ID=id152;Parent=rna150;Dbxref=GeneID:4488034;gbkey=tRNA;product=tRNA-Trp
NC_008570.1	RefSeq	gene	4474708	4475892	.	-	.	ID=gene4032;Dbxref=GeneID:4488035;Name=tuf-2;gbkey=Gene;gene=tuf-2;gene_biotype=protein_coding;gene_synonym=tuf;locus_tag=AHA_4036
NC_008570.1	RefSeq	CDS	4474708	4475892	.	-	0	ID=cds3877;Parent=gene4032;Dbxref=Genbank:YP_858463.1,GeneID:4488035;Name=YP_858463.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf-2;product=elongation factor Tu;protein_id=YP_858463.1;transl_table=11
NC_008570.1	RefSeq	gene	4476064	4476138	.	-	.	ID=gene4033;Dbxref=GeneID:4488036;Name=AHA_4037;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4037
NC_008570.1	RefSeq	tRNA	4476064	4476138	.	-	.	ID=rna151;Parent=gene4033;Dbxref=GeneID:4488036;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	exon	4476064	4476138	.	-	.	ID=id153;Parent=rna151;Dbxref=GeneID:4488036;gbkey=tRNA;product=tRNA-Gly
NC_008570.1	RefSeq	gene	4476177	4476261	.	-	.	ID=gene4034;Dbxref=GeneID:4488037;Name=AHA_4038;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4038
NC_008570.1	RefSeq	tRNA	4476177	4476261	.	-	.	ID=rna152;Parent=gene4034;Dbxref=GeneID:4488037;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	exon	4476177	4476261	.	-	.	ID=id154;Parent=rna152;Dbxref=GeneID:4488037;gbkey=tRNA;product=tRNA-Tyr
NC_008570.1	RefSeq	gene	4476523	4477461	.	+	.	ID=gene4035;Dbxref=GeneID:4488038;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AHA_4039
NC_008570.1	RefSeq	CDS	4476523	4477461	.	+	0	ID=cds3878;Parent=gene4035;Dbxref=Genbank:YP_858464.1,GeneID:4488038;Name=YP_858464.1;Note=catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=YP_858464.1;transl_table=11
NC_008570.1	RefSeq	gene	4477537	4478502	.	-	.	ID=gene4036;Dbxref=GeneID:4488039;Name=AHA_4040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4040
NC_008570.1	RefSeq	CDS	4477537	4478502	.	-	0	ID=cds3879;Parent=gene4036;Dbxref=Genbank:YP_858465.1,GeneID:4488039;Name=YP_858465.1;Note=identified by similarity to SP:P06709%3B match to protein family HMM PF01022%3B match to protein family HMM PF02082%3B match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM TIGR00121;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=YP_858465.1;transl_table=11
NC_008570.1	RefSeq	gene	4478499	4479536	.	-	.	ID=gene4037;Dbxref=GeneID:4488040;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AHA_4041
NC_008570.1	RefSeq	CDS	4478499	4479536	.	-	0	ID=cds3880;Parent=gene4037;Dbxref=Genbank:YP_858466.1,GeneID:4488040;Name=YP_858466.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_858466.1;transl_table=11
NC_008570.1	RefSeq	gene	4479664	4480317	.	+	.	ID=gene4038;Dbxref=GeneID:4488041;Name=AHA_4042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4042
NC_008570.1	RefSeq	CDS	4479664	4480317	.	+	0	ID=cds3881;Parent=gene4038;Dbxref=Genbank:YP_858467.1,GeneID:4488041;Name=YP_858467.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;product=KtrA;protein_id=YP_858467.1;transl_table=11
NC_008570.1	RefSeq	gene	4480314	4481669	.	+	.	ID=gene4039;Dbxref=GeneID:4488042;Name=AHA_4043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4043
NC_008570.1	RefSeq	CDS	4480314	4481669	.	+	0	ID=cds3882;Parent=gene4039;Dbxref=Genbank:YP_858468.1,GeneID:4488042;Name=YP_858468.1;Note=identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933;gbkey=CDS;product=KtrB;protein_id=YP_858468.1;transl_table=11
NC_008570.1	RefSeq	gene	4481697	4482524	.	-	.	ID=gene4040;Dbxref=GeneID:4488043;Name=AHA_4044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4044
NC_008570.1	RefSeq	CDS	4481697	4482524	.	-	0	ID=cds3883;Parent=gene4040;Dbxref=Genbank:YP_858469.1,GeneID:4488043;Name=YP_858469.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_858469.1;transl_table=11
NC_008570.1	RefSeq	gene	4482625	4483158	.	+	.	ID=gene4041;Dbxref=GeneID:4488044;Name=AHA_4045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4045
NC_008570.1	RefSeq	CDS	4482625	4483158	.	+	0	ID=cds3884;Parent=gene4041;Dbxref=Genbank:YP_858470.1,GeneID:4488044;Name=YP_858470.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;product=alkylhydroperoxidase;protein_id=YP_858470.1;transl_table=11
NC_008570.1	RefSeq	gene	4483172	4483606	.	+	.	ID=gene4042;Dbxref=GeneID:4488045;Name=AHA_4046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4046
NC_008570.1	RefSeq	CDS	4483172	4483606	.	+	0	ID=cds3885;Parent=gene4042;Dbxref=Genbank:YP_858471.1,GeneID:4488045;Name=YP_858471.1;Note=identified by match to protein family HMM PF04224;gbkey=CDS;product=MC21 protein;protein_id=YP_858471.1;transl_table=11
NC_008570.1	RefSeq	gene	4483649	4485619	.	-	.	ID=gene4043;Dbxref=GeneID:4487556;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AHA_4047
NC_008570.1	RefSeq	CDS	4483649	4485619	.	-	0	ID=cds3886;Parent=gene4043;Dbxref=Genbank:YP_858472.1,GeneID:4487556;Name=YP_858472.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;gene=topB;product=DNA topoisomerase III;protein_id=YP_858472.1;transl_table=11
NC_008570.1	RefSeq	gene	4485984	4487114	.	+	.	ID=gene4044;Dbxref=GeneID:4487557;Name=AHA_4048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4048
NC_008570.1	RefSeq	CDS	4485984	4487114	.	+	0	ID=cds3887;Parent=gene4044;Dbxref=Genbank:YP_858473.1,GeneID:4487557;Name=YP_858473.1;Note=identified by match to protein family HMM PF03264;gbkey=CDS;product=cytochrome c-type protein TorC;protein_id=YP_858473.1;transl_table=11
NC_008570.1	RefSeq	gene	4487137	4489617	.	+	.	ID=gene4045;Dbxref=GeneID:4487558;Name=AHA_4049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4049
NC_008570.1	RefSeq	CDS	4487137	4489617	.	+	0	ID=cds3888;Parent=gene4045;Dbxref=Genbank:YP_858474.1,GeneID:4487558;Name=YP_858474.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR00509%3B match to protein family HMM TIGR01409;gbkey=CDS;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase family protein;protein_id=YP_858474.1;transl_table=11
NC_008570.1	RefSeq	gene	4489760	4490221	.	-	.	ID=gene4046;Dbxref=GeneID:4487559;Name=AHA_4050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4050
NC_008570.1	RefSeq	CDS	4489760	4490221	.	-	0	ID=cds3889;Parent=gene4046;Dbxref=Genbank:YP_858475.1,GeneID:4487559;Name=YP_858475.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858475.1;transl_table=11
NC_008570.1	RefSeq	gene	4490263	4491612	.	-	.	ID=gene4047;Dbxref=GeneID:4487560;Name=AHA_4051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4051
NC_008570.1	RefSeq	CDS	4490263	4491612	.	-	0	ID=cds3890;Parent=gene4047;Dbxref=Genbank:YP_858476.1,GeneID:4487560;Name=YP_858476.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_858476.1;transl_table=11
NC_008570.1	RefSeq	gene	4491650	4492306	.	-	.	ID=gene4048;Dbxref=GeneID:4487561;Name=AHA_4052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4052
NC_008570.1	RefSeq	CDS	4491650	4492306	.	-	0	ID=cds3891;Parent=gene4048;Dbxref=Genbank:YP_858477.1,GeneID:4487561;Name=YP_858477.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=two-component system%2C regulatory protein;protein_id=YP_858477.1;transl_table=11
NC_008570.1	RefSeq	gene	4492393	4492725	.	-	.	ID=gene4049;Dbxref=GeneID:4487562;Name=AHA_4053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4053
NC_008570.1	RefSeq	CDS	4492393	4492725	.	-	0	ID=cds3892;Parent=gene4049;Dbxref=Genbank:YP_858478.1,GeneID:4487562;Name=YP_858478.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858478.1;transl_table=11
NC_008570.1	RefSeq	gene	4492789	4493034	.	+	.	ID=gene4050;Dbxref=GeneID:4487563;Name=AHA_4054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4054
NC_008570.1	RefSeq	CDS	4492789	4493034	.	+	0	ID=cds3893;Parent=gene4050;Dbxref=Genbank:YP_858479.1,GeneID:4487563;Name=YP_858479.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858479.1;transl_table=11
NC_008570.1	RefSeq	gene	4493079	4493711	.	-	.	ID=gene4051;Dbxref=GeneID:4487564;Name=AHA_4055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4055
NC_008570.1	RefSeq	CDS	4493079	4493711	.	-	0	ID=cds3894;Parent=gene4051;Dbxref=Genbank:YP_858480.1,GeneID:4487564;Name=YP_858480.1;Note=identified by match to protein family HMM PF01794;gbkey=CDS;product=membrane protein YedZ;protein_id=YP_858480.1;transl_table=11
NC_008570.1	RefSeq	gene	4493731	4494732	.	-	.	ID=gene4052;Dbxref=GeneID:4487565;Name=AHA_4056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4056
NC_008570.1	RefSeq	CDS	4493731	4494732	.	-	0	ID=cds3895;Parent=gene4052;Dbxref=Genbank:YP_858481.1,GeneID:4487565;Name=YP_858481.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B sulfite oxidase activity not demonstrated%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfite oxidase subunit YedY;protein_id=YP_858481.1;transl_table=11
NC_008570.1	RefSeq	gene	4494804	4494899	.	-	.	ID=gene4053;Dbxref=GeneID:4487566;Name=AHA_4057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4057
NC_008570.1	RefSeq	CDS	4494804	4494899	.	-	0	ID=cds3896;Parent=gene4053;Dbxref=Genbank:YP_858482.1,GeneID:4487566;Name=YP_858482.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858482.1;transl_table=11
NC_008570.1	RefSeq	gene	4495103	4495585	.	+	.	ID=gene4054;Dbxref=GeneID:4487567;Name=AHA_4058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4058
NC_008570.1	RefSeq	CDS	4495103	4495585	.	+	0	ID=cds3897;Parent=gene4054;Dbxref=Genbank:YP_858483.1,GeneID:4487567;Name=YP_858483.1;Note=identified by match to protein family HMM PF06496;gbkey=CDS;product=chloride channel protein EriC;protein_id=YP_858483.1;transl_table=11
NC_008570.1	RefSeq	gene	4495658	4496938	.	-	.	ID=gene4055;Dbxref=GeneID:4487568;Name=AHA_4059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4059
NC_008570.1	RefSeq	CDS	4495658	4496938	.	-	0	ID=cds3898;Parent=gene4055;Dbxref=Genbank:YP_858484.1,GeneID:4487568;Name=YP_858484.1;Note=identified by similarity to SP:P14375%3B match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=transcriptional regulatory protein ZraR;protein_id=YP_858484.1;transl_table=11
NC_008570.1	RefSeq	gene	4496935	4497450	.	-	.	ID=gene4056;Dbxref=GeneID:4487569;Name=AHA_4060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4060
NC_008570.1	RefSeq	CDS	4496935	4497450	.	-	0	ID=cds3899;Parent=gene4056;Dbxref=Genbank:YP_858485.1,GeneID:4487569;Name=YP_858485.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858485.1;transl_table=11
NC_008570.1	RefSeq	gene	4497459	4498859	.	-	.	ID=gene4057;Dbxref=GeneID:4487570;Name=AHA_4061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4061
NC_008570.1	RefSeq	CDS	4497459	4498859	.	-	0	ID=cds3900;Parent=gene4057;Dbxref=Genbank:YP_858486.1,GeneID:4487570;Name=YP_858486.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_858486.1;transl_table=11
NC_008570.1	RefSeq	gene	4499180	4499695	.	+	.	ID=gene4058;Dbxref=GeneID:4487571;Name=AHA_4062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4062
NC_008570.1	RefSeq	CDS	4499180	4499695	.	+	0	ID=cds3901;Parent=gene4058;Dbxref=Genbank:YP_858487.1,GeneID:4487571;Name=YP_858487.1;Note=identified by match to protein family HMM TIGR01498;gbkey=CDS;product=7%2C 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;protein_id=YP_858487.1;transl_table=11
NC_008570.1	RefSeq	gene	4499699	4500403	.	-	.	ID=gene4059;Dbxref=GeneID:4487572;Name=AHA_4063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4063
NC_008570.1	RefSeq	CDS	4499699	4500403	.	-	0	ID=cds3902;Parent=gene4059;Dbxref=Genbank:YP_858488.1,GeneID:4487572;Name=YP_858488.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=pteridine reductase 1;protein_id=YP_858488.1;transl_table=11
NC_008570.1	RefSeq	gene	4500523	4500927	.	+	.	ID=gene4060;Dbxref=GeneID:4487573;Name=AHA_4065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4065
NC_008570.1	RefSeq	CDS	4500523	4500927	.	+	0	ID=cds3903;Parent=gene4060;Dbxref=Genbank:YP_858489.1,GeneID:4487573;Name=YP_858489.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=YP_858489.1;transl_table=11
NC_008570.1	RefSeq	gene	4500924	4501460	.	-	.	ID=gene4061;Dbxref=GeneID:4487574;Name=AHA_4064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4064
NC_008570.1	RefSeq	CDS	4500924	4501460	.	-	0	ID=cds3904;Parent=gene4061;Dbxref=Genbank:YP_858490.1,GeneID:4487574;Name=YP_858490.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858490.1;transl_table=11
NC_008570.1	RefSeq	gene	4501546	4502310	.	+	.	ID=gene4062;Dbxref=GeneID:4487575;Name=AHA_4066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4066
NC_008570.1	RefSeq	CDS	4501546	4502310	.	+	0	ID=cds3905;Parent=gene4062;Dbxref=Genbank:YP_858491.1,GeneID:4487575;Name=YP_858491.1;gbkey=CDS;product=glutamine transport system substrate-binding protein;protein_id=YP_858491.1;transl_table=11
NC_008570.1	RefSeq	gene	4502405	4502866	.	-	.	ID=gene4063;Dbxref=GeneID:4487439;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AHA_4067
NC_008570.1	RefSeq	CDS	4502405	4502866	.	-	0	ID=cds3906;Parent=gene4063;Dbxref=Genbank:YP_858492.1,GeneID:4487439;Name=YP_858492.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;gene=asnC;product=DNA-binding transcriptional regulator AsnC;protein_id=YP_858492.1;transl_table=11
NC_008570.1	RefSeq	gene	4502900	4504012	.	+	.	ID=gene4064;Dbxref=GeneID:4487440;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AHA_4068
NC_008570.1	RefSeq	CDS	4502900	4504012	.	+	0	ID=cds3907;Parent=gene4064;Dbxref=Genbank:YP_858493.1,GeneID:4487440;Name=YP_858493.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;gene=asnA;product=asparagine synthetase AsnA;protein_id=YP_858493.1;transl_table=11
NC_008570.1	RefSeq	gene	4504023	4504136	.	-	.	ID=gene4065;Dbxref=GeneID:4487441;Name=AHA_4069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4069
NC_008570.1	RefSeq	CDS	4504023	4504136	.	-	0	ID=cds3908;Parent=gene4065;Dbxref=Genbank:YP_858494.1,GeneID:4487441;Name=YP_858494.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858494.1;transl_table=11
NC_008570.1	RefSeq	gene	4504222	4505046	.	-	.	ID=gene4066;Dbxref=GeneID:4487442;Name=AHA_4070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4070
NC_008570.1	RefSeq	CDS	4504222	4505046	.	-	0	ID=cds3909;Parent=gene4066;Dbxref=Genbank:YP_858495.1,GeneID:4487442;Name=YP_858495.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=YP_858495.1;transl_table=11
NC_008570.1	RefSeq	gene	4505107	4507680	.	-	.	ID=gene4067;Dbxref=GeneID:4487443;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AHA_4071
NC_008570.1	RefSeq	CDS	4505107	4507680	.	-	0	ID=cds3910;Parent=gene4067;Dbxref=Genbank:YP_858496.1,GeneID:4487443;Name=YP_858496.1;Note=identified by similarity to SP:P63284%3B match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;gene=clpB;product=ATP-dependent chaperone protein ClpB;protein_id=YP_858496.1;transl_table=11
NC_008570.1	RefSeq	gene	4507852	4508589	.	-	.	ID=gene4068;Dbxref=GeneID:4487444;Name=AHA_4072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4072
NC_008570.1	RefSeq	CDS	4507852	4508589	.	-	0	ID=cds3911;Parent=gene4068;Dbxref=Genbank:YP_858497.1,GeneID:4487444;Name=YP_858497.1;Note=identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726;gbkey=CDS;product=hypothetical protein;protein_id=YP_858497.1;transl_table=11
NC_008570.1	RefSeq	gene	4508708	4509688	.	-	.	ID=gene4069;Dbxref=GeneID:4487445;Name=AHA_4073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4073
NC_008570.1	RefSeq	CDS	4508708	4509688	.	-	0	ID=cds3912;Parent=gene4069;Dbxref=Genbank:YP_858498.1,GeneID:4487445;Name=YP_858498.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=YP_858498.1;transl_table=11
NC_008570.1	RefSeq	gene	4509644	4510561	.	+	.	ID=gene4070;Dbxref=GeneID:4487446;Name=AHA_4074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4074
NC_008570.1	RefSeq	CDS	4509644	4510561	.	+	0	ID=cds3913;Parent=gene4070;Dbxref=Genbank:YP_858499.1,GeneID:4487446;Name=YP_858499.1;gbkey=CDS;product=ComL family lipoprotein;protein_id=YP_858499.1;transl_table=11
NC_008570.1	RefSeq	gene	4510710	4512038	.	-	.	ID=gene4071;Dbxref=GeneID:4487447;Name=AHA_4075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4075
NC_008570.1	RefSeq	CDS	4510710	4512038	.	-	0	ID=cds3914;Parent=gene4071;Dbxref=Genbank:YP_858500.1,GeneID:4487447;Name=YP_858500.1;Note=CoADR%3B specific for coenzyme A disulfide%3B requires NADH%3B involved in protecting cells against reactive oxygen species by recycling coenzyme A disulfide which can reduce hydrogen peroxide;gbkey=CDS;product=coenzyme A disulfide reductase;protein_id=YP_858500.1;transl_table=11
NC_008570.1	RefSeq	gene	4512132	4513532	.	-	.	ID=gene4072;Dbxref=GeneID:4487448;Name=AHA_4076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4076
NC_008570.1	RefSeq	CDS	4512132	4513532	.	-	0	ID=cds3915;Parent=gene4072;Dbxref=Genbank:YP_858501.1,GeneID:4487448;Name=YP_858501.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;product=sodium/dicarboxylate symporter family protein;protein_id=YP_858501.1;transl_table=11
NC_008570.1	RefSeq	gene	4513698	4515011	.	-	.	ID=gene4073;Dbxref=GeneID:4487449;Name=AHA_4077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4077
NC_008570.1	RefSeq	CDS	4513698	4515011	.	-	0	ID=cds3916;Parent=gene4073;Dbxref=Genbank:YP_858502.1,GeneID:4487449;Name=YP_858502.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;product=hypothetical protein;protein_id=YP_858502.1;transl_table=11
NC_008570.1	RefSeq	gene	4515317	4516069	.	-	.	ID=gene4074;Dbxref=GeneID:4487450;Name=AHA_4078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4078
NC_008570.1	RefSeq	CDS	4515317	4516069	.	-	0	ID=cds3917;Parent=gene4074;Dbxref=Genbank:YP_858503.1,GeneID:4487450;Name=YP_858503.1;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_858503.1;transl_table=11
NC_008570.1	RefSeq	gene	4516166	4517650	.	-	.	ID=gene4075;Dbxref=GeneID:4487451;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AHA_4079
NC_008570.1	RefSeq	CDS	4516166	4517650	.	-	0	ID=cds3918;Parent=gene4075;Dbxref=Genbank:YP_858504.1,GeneID:4487451;Name=YP_858504.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=YP_858504.1;transl_table=11
NC_008570.1	RefSeq	gene	4517662	4519188	.	-	.	ID=gene4076;Dbxref=GeneID:4487452;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AHA_4080
NC_008570.1	RefSeq	CDS	4517662	4519188	.	-	0	ID=cds3919;Parent=gene4076;Dbxref=Genbank:YP_858505.1,GeneID:4487452;Name=YP_858505.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=YP_858505.1;transl_table=11
NC_008570.1	RefSeq	gene	4519696	4520898	.	-	.	ID=gene4077;Dbxref=GeneID:4487453;Name=AHA_4081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4081
NC_008570.1	RefSeq	CDS	4519696	4520898	.	-	0	ID=cds3920;Parent=gene4077;Dbxref=Genbank:YP_858506.1,GeneID:4487453;Name=YP_858506.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_858506.1;transl_table=11
NC_008570.1	RefSeq	gene	4521006	4521908	.	+	.	ID=gene4078;Dbxref=GeneID:4487454;Name=AHA_4082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4082
NC_008570.1	RefSeq	CDS	4521006	4521908	.	+	0	ID=cds3921;Parent=gene4078;Dbxref=Genbank:YP_858507.1,GeneID:4487454;Name=YP_858507.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF06719;gbkey=CDS;product=HTH-type transcriptional regulator YqhC;protein_id=YP_858507.1;transl_table=11
NC_008570.1	RefSeq	gene	4522504	4524396	.	-	.	ID=gene4079;Dbxref=GeneID:4487455;Name=AHA_4083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4083
NC_008570.1	RefSeq	CDS	4522504	4524396	.	-	0	ID=cds3922;Parent=gene4079;Dbxref=Genbank:YP_858508.1,GeneID:4487455;Name=YP_858508.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858508.1;transl_table=11
NC_008570.1	RefSeq	gene	4524647	4526017	.	-	.	ID=gene4080;Dbxref=GeneID:4487456;Name=AHA_4084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4084
NC_008570.1	RefSeq	CDS	4524647	4526017	.	-	0	ID=cds3923;Parent=gene4080;Dbxref=Genbank:YP_858509.1,GeneID:4487456;Name=YP_858509.1;Note=identified by match to protein family HMM PF02666;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=YP_858509.1;transl_table=11
NC_008570.1	RefSeq	gene	4526310	4526386	.	-	.	ID=gene4081;Dbxref=GeneID:4487457;Name=AHA_4085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4085
NC_008570.1	RefSeq	tRNA	4526310	4526386	.	-	.	ID=rna153;Parent=gene4081;Dbxref=GeneID:4487457;gbkey=tRNA;product=tRNA-Trp
NC_008570.1	RefSeq	exon	4526310	4526386	.	-	.	ID=id155;Parent=rna153;Dbxref=GeneID:4487457;gbkey=tRNA;product=tRNA-Trp
NC_008570.1	RefSeq	gene	4526595	4527137	.	+	.	ID=gene4082;Dbxref=GeneID:4490228;Name=AHA_4086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4086
NC_008570.1	RefSeq	CDS	4526595	4527137	.	+	0	ID=cds3924;Parent=gene4082;Dbxref=Genbank:YP_858510.1,GeneID:4490228;Name=YP_858510.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858510.1;transl_table=11
NC_008570.1	RefSeq	gene	4527403	4528332	.	+	.	ID=gene4083;Dbxref=GeneID:4490229;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AHA_4087
NC_008570.1	RefSeq	CDS	4527403	4528332	.	+	0	ID=cds3925;Parent=gene4083;Dbxref=Genbank:YP_858511.1,GeneID:4490229;Name=YP_858511.1;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=YP_858511.1;transl_table=11
NC_008570.1	RefSeq	gene	4528349	4528813	.	+	.	ID=gene4084;Dbxref=GeneID:4490230;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AHA_4088
NC_008570.1	RefSeq	CDS	4528349	4528813	.	+	0	ID=cds3926;Parent=gene4084;Dbxref=Genbank:YP_858512.1,GeneID:4490230;Name=YP_858512.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;gene=pyrI;product=aspartate carbamoyltransferase;protein_id=YP_858512.1;transl_table=11
NC_008570.1	RefSeq	gene	4528950	4529522	.	+	.	ID=gene4085;Dbxref=GeneID:4490231;Name=AHA_4089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4089
NC_008570.1	RefSeq	CDS	4528950	4529522	.	+	0	ID=cds3927;Parent=gene4085;Dbxref=Genbank:YP_858513.1,GeneID:4490231;Name=YP_858513.1;Note=identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863;gbkey=CDS;product=arginine repressor;protein_id=YP_858513.1;transl_table=11
NC_008570.1	RefSeq	gene	4529701	4531104	.	-	.	ID=gene4086;Dbxref=GeneID:4490232;Name=AHA_4090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4090
NC_008570.1	RefSeq	CDS	4529701	4531104	.	-	0	ID=cds3928;Parent=gene4086;Dbxref=Genbank:YP_858514.1,GeneID:4490232;Name=YP_858514.1;Note=identified by match to protein family HMM PF03606;gbkey=CDS;product=transporter;protein_id=YP_858514.1;transl_table=11
NC_008570.1	RefSeq	gene	4531228	4532232	.	-	.	ID=gene4087;Dbxref=GeneID:4490233;Name=argF-2;gbkey=Gene;gene=argF-2;gene_biotype=protein_coding;locus_tag=AHA_4091
NC_008570.1	RefSeq	CDS	4531228	4532232	.	-	0	ID=cds3929;Parent=gene4087;Dbxref=Genbank:YP_858515.1,GeneID:4490233;Name=YP_858515.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;gene=argF-2;product=ornithine carbamoyltransferase;protein_id=YP_858515.1;transl_table=11
NC_008570.1	RefSeq	gene	4532363	4533289	.	-	.	ID=gene4088;Dbxref=GeneID:4490234;Name=arcC-2;gbkey=Gene;gene=arcC-2;gene_biotype=protein_coding;locus_tag=AHA_4092
NC_008570.1	RefSeq	CDS	4532363	4533289	.	-	0	ID=cds3930;Parent=gene4088;Dbxref=Genbank:YP_858516.1,GeneID:4490234;Name=YP_858516.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;gene=arcC-2;product=carbamate kinase;protein_id=YP_858516.1;transl_table=11
NC_008570.1	RefSeq	gene	4533353	4534573	.	-	.	ID=gene4089;Dbxref=GeneID:4490235;Name=arcA-2;gbkey=Gene;gene=arcA-2;gene_biotype=protein_coding;locus_tag=AHA_4093
NC_008570.1	RefSeq	CDS	4533353	4534573	.	-	0	ID=cds3931;Parent=gene4089;Dbxref=Genbank:YP_858517.1,GeneID:4490235;Name=YP_858517.1;Note=catalyzes the degradation of arginine to citruline and ammonia;gbkey=CDS;gene=arcA-2;product=arginine deiminase;protein_id=YP_858517.1;transl_table=11
NC_008570.1	RefSeq	gene	4535244	4535495	.	+	.	ID=gene4090;Dbxref=GeneID:4490236;Name=AHA_4094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4094
NC_008570.1	RefSeq	CDS	4535244	4535495	.	+	0	ID=cds3932;Parent=gene4090;Dbxref=Genbank:YP_858518.1,GeneID:4490236;Name=YP_858518.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858518.1;transl_table=11
NC_008570.1	RefSeq	gene	4535596	4536243	.	+	.	ID=gene4091;Dbxref=GeneID:4490237;Name=AHA_4095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4095
NC_008570.1	RefSeq	CDS	4535596	4536243	.	+	0	ID=cds3933;Parent=gene4091;Dbxref=Genbank:YP_858519.1,GeneID:4490237;Name=YP_858519.1;gbkey=CDS;product=ParA family protein;protein_id=YP_858519.1;transl_table=11
NC_008570.1	RefSeq	gene	4536245	4536613	.	+	.	ID=gene4092;Dbxref=GeneID:4490238;Name=AHA_4096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4096
NC_008570.1	RefSeq	CDS	4536245	4536613	.	+	0	ID=cds3934;Parent=gene4092;Dbxref=Genbank:YP_858520.1,GeneID:4490238;Name=YP_858520.1;gbkey=CDS;product=CopG family transcriptional regulator;protein_id=YP_858520.1;transl_table=11
NC_008570.1	RefSeq	gene	4537215	4538948	.	-	.	ID=gene4093;Dbxref=GeneID:4490239;Name=AHA_4097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4097
NC_008570.1	RefSeq	CDS	4537215	4538948	.	-	0	ID=cds3935;Parent=gene4093;Dbxref=Genbank:YP_858521.1,GeneID:4490239;Name=YP_858521.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858521.1;transl_table=11
NC_008570.1	RefSeq	gene	4539000	4540010	.	-	.	ID=gene4094;Dbxref=GeneID:4490240;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AHA_4098
NC_008570.1	RefSeq	CDS	4539000	4540010	.	-	0	ID=cds3936;Parent=gene4094;Dbxref=Genbank:YP_858522.1,GeneID:4490240;Name=YP_858522.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter inner membrane protein;protein_id=YP_858522.1;transl_table=11
NC_008570.1	RefSeq	gene	4540027	4541547	.	-	.	ID=gene4095;Dbxref=GeneID:4490241;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AHA_4099
NC_008570.1	RefSeq	CDS	4540027	4541547	.	-	0	ID=cds3937;Parent=gene4095;Dbxref=Genbank:YP_858523.1,GeneID:4490241;Name=YP_858523.1;Note=with MglBC transports galactose or methyl galactoside into the cell%3B contains 2 ATP binding domains;gbkey=CDS;gene=mglA;product=galactose/methyl galaxtoside transporter ATP-binding protein;protein_id=YP_858523.1;transl_table=11
NC_008570.1	RefSeq	gene	4541602	4542588	.	-	.	ID=gene4096;Dbxref=GeneID:4490242;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AHA_4100
NC_008570.1	RefSeq	CDS	4541602	4542588	.	-	0	ID=cds3938;Parent=gene4096;Dbxref=Genbank:YP_858524.1,GeneID:4490242;Name=YP_858524.1;Note=identified by similarity to SP:P02927%3B match to protein family HMM PF00532;gbkey=CDS;gene=mglB;product=galactose ABC transporter periplasmic galactose-binding protein;protein_id=YP_858524.1;transl_table=11
NC_008570.1	RefSeq	gene	4542823	4545900	.	-	.	ID=gene4097;Dbxref=GeneID:4490243;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AHA_4101
NC_008570.1	RefSeq	CDS	4542823	4545900	.	-	0	ID=cds3939;Parent=gene4097;Dbxref=Genbank:YP_858525.1,GeneID:4490243;Name=YP_858525.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-D-galactosidase;protein_id=YP_858525.1;transl_table=11
NC_008570.1	RefSeq	gene	4546119	4547123	.	-	.	ID=gene4098;Dbxref=GeneID:4490244;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AHA_4102
NC_008570.1	RefSeq	CDS	4546119	4547123	.	-	0	ID=cds3940;Parent=gene4098;Dbxref=Genbank:YP_858526.1,GeneID:4490244;Name=YP_858526.1;Note=identified by similarity to SP:P03024%3B match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=galR;product=transcriptional regulator GalR;protein_id=YP_858526.1;transl_table=11
NC_008570.1	RefSeq	gene	4547328	4548341	.	+	.	ID=gene4099;Dbxref=GeneID:4490245;Name=galE-2;gbkey=Gene;gene=galE-2;gene_biotype=protein_coding;locus_tag=AHA_4103
NC_008570.1	RefSeq	CDS	4547328	4548341	.	+	0	ID=cds3941;Parent=gene4099;Dbxref=Genbank:YP_858527.1,GeneID:4490245;Name=YP_858527.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE-2;product=UDP-glucose 4-epimerase;protein_id=YP_858527.1;transl_table=11
NC_008570.1	RefSeq	gene	4548448	4549506	.	+	.	ID=gene4100;Dbxref=GeneID:4490246;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AHA_4104
NC_008570.1	RefSeq	CDS	4548448	4549506	.	+	0	ID=cds3942;Parent=gene4100;Dbxref=Genbank:YP_858528.1,GeneID:4490246;Name=YP_858528.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_858528.1;transl_table=11
NC_008570.1	RefSeq	gene	4549503	4550651	.	+	.	ID=gene4101;Dbxref=GeneID:4490247;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AHA_4105
NC_008570.1	RefSeq	CDS	4549503	4550651	.	+	0	ID=cds3943;Parent=gene4101;Dbxref=Genbank:YP_858529.1,GeneID:4490247;Name=YP_858529.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;gene=galK;product=galactokinase;protein_id=YP_858529.1;transl_table=11
NC_008570.1	RefSeq	gene	4550572	4551708	.	+	.	ID=gene4102;Dbxref=GeneID:4488123;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AHA_4106
NC_008570.1	RefSeq	CDS	4550572	4551708	.	+	0	ID=cds3944;Parent=gene4102;Dbxref=Genbank:YP_858530.1,GeneID:4488123;Name=YP_858530.1;Note=identified by match to protein family HMM PF01263%3B match to protein family HMM TIGR02636;gbkey=CDS;gene=galM;product=galactose mutarotase;protein_id=YP_858530.1;transl_table=11
NC_008570.1	RefSeq	gene	4551894	4552904	.	+	.	ID=gene4103;Dbxref=GeneID:4488124;Name=AHA_4107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4107
NC_008570.1	RefSeq	CDS	4551894	4552904	.	+	0	ID=cds3945;Parent=gene4103;Dbxref=Genbank:YP_858531.1,GeneID:4488124;Name=YP_858531.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=YP_858531.1;transl_table=11
NC_008570.1	RefSeq	gene	4553085	4553900	.	+	.	ID=gene4104;Dbxref=GeneID:4488125;Name=AHA_4108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4108
NC_008570.1	RefSeq	CDS	4553085	4553900	.	+	0	ID=cds3946;Parent=gene4104;Dbxref=Genbank:YP_858532.1,GeneID:4488125;Name=YP_858532.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_858532.1;transl_table=11
NC_008570.1	RefSeq	gene	4553962	4554627	.	-	.	ID=gene4105;Dbxref=GeneID:4488126;Name=AHA_4109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4109
NC_008570.1	RefSeq	CDS	4553962	4554627	.	-	0	ID=cds3947;Parent=gene4105;Dbxref=Genbank:YP_858533.1,GeneID:4488126;Name=YP_858533.1;Note=identified by match to protein family HMM TIGR02451;gbkey=CDS;product=transcriptional activator ChrR;protein_id=YP_858533.1;transl_table=11
NC_008570.1	RefSeq	gene	4554620	4555300	.	-	.	ID=gene4106;Dbxref=GeneID:4488127;Name=AHA_4110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4110
NC_008570.1	RefSeq	CDS	4554620	4555300	.	-	0	ID=cds3948;Parent=gene4106;Dbxref=Genbank:YP_858534.1,GeneID:4488127;Name=YP_858534.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937;gbkey=CDS;product=ECF subfamily RNA polymerase sigma factor;protein_id=YP_858534.1;transl_table=11
NC_008570.1	RefSeq	gene	4555322	4555981	.	-	.	ID=gene4107;Dbxref=GeneID:4488128;Name=AHA_4111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4111
NC_008570.1	RefSeq	CDS	4555322	4555981	.	-	0	ID=cds3949;Parent=gene4107;Dbxref=Genbank:YP_858535.1,GeneID:4488128;Name=YP_858535.1;Note=identified by match to protein family HMM PF02190;gbkey=CDS;product=ATP-dependent protease La;protein_id=YP_858535.1;transl_table=11
NC_008570.1	RefSeq	gene	4556202	4557947	.	+	.	ID=gene4108;Dbxref=GeneID:4488129;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AHA_4112
NC_008570.1	RefSeq	CDS	4556202	4557947	.	+	0	ID=cds3950;Parent=gene4108;Dbxref=Genbank:YP_858536.1,GeneID:4488129;Name=YP_858536.1;Note=identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=YP_858536.1;transl_table=11
NC_008570.1	RefSeq	gene	4557951	4558790	.	+	.	ID=gene4109;Dbxref=GeneID:4488130;Name=AHA_4113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4113
NC_008570.1	RefSeq	CDS	4557951	4558790	.	+	0	ID=cds3951;Parent=gene4109;Dbxref=Genbank:YP_858537.1,GeneID:4488130;Name=YP_858537.1;Note=identified by match to protein family HMM PF05036;gbkey=CDS;product=cell division protein;protein_id=YP_858537.1;transl_table=11
NC_008570.1	RefSeq	gene	4558979	4559512	.	+	.	ID=gene4110;Dbxref=GeneID:4488131;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AHA_4114
NC_008570.1	RefSeq	CDS	4558979	4559512	.	+	0	ID=cds3952;Parent=gene4110;Dbxref=Genbank:YP_858538.1,GeneID:4488131;Name=YP_858538.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslV;product=ATP-dependent protease peptidase subunit;protein_id=YP_858538.1;transl_table=11
NC_008570.1	RefSeq	gene	4559605	4560933	.	+	.	ID=gene4111;Dbxref=GeneID:4488132;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AHA_4115
NC_008570.1	RefSeq	CDS	4559605	4560933	.	+	0	ID=cds3953;Parent=gene4111;Dbxref=Genbank:YP_858539.1,GeneID:4488132;Name=YP_858539.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=YP_858539.1;transl_table=11
NC_008570.1	RefSeq	gene	4561026	4562450	.	-	.	ID=gene4112;Dbxref=GeneID:4488133;Name=AHA_4116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4116
NC_008570.1	RefSeq	CDS	4561026	4562450	.	-	0	ID=cds3954;Parent=gene4112;Dbxref=Genbank:YP_858540.1,GeneID:4488133;Name=YP_858540.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=major facilitator transporter;protein_id=YP_858540.1;transl_table=11
NC_008570.1	RefSeq	gene	4562573	4563529	.	+	.	ID=gene4113;Dbxref=GeneID:4488134;Name=AHA_4117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4117
NC_008570.1	RefSeq	CDS	4562573	4563529	.	+	0	ID=cds3955;Parent=gene4113;Dbxref=Genbank:YP_858541.1,GeneID:4488134;Name=YP_858541.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=regulatory protein LysR;protein_id=YP_858541.1;transl_table=11
NC_008570.1	RefSeq	gene	4563784	4566363	.	+	.	ID=gene4114;Dbxref=GeneID:4488135;Name=nirB-2;gbkey=Gene;gene=nirB-2;gene_biotype=protein_coding;locus_tag=AHA_4118
NC_008570.1	RefSeq	CDS	4563784	4566363	.	+	0	ID=cds3956;Parent=gene4114;Dbxref=Genbank:YP_858542.1,GeneID:4488135;Name=YP_858542.1;Note=identified by similarity to SP:P08201%3B match to protein family HMM PF00070%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM PF04324%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR02374;gbkey=CDS;gene=nirB-2;product=nitrite reductase [NAD(P)H]%2C large subunit;protein_id=YP_858542.1;transl_table=11
NC_008570.1	RefSeq	gene	4566470	4566787	.	+	.	ID=gene4115;Dbxref=GeneID:4488136;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AHA_4119
NC_008570.1	RefSeq	CDS	4566470	4566787	.	+	0	ID=cds3957;Parent=gene4115;Dbxref=Genbank:YP_858543.1,GeneID:4488136;Name=YP_858543.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=YP_858543.1;transl_table=11
NC_008570.1	RefSeq	gene	4566839	4567651	.	+	.	ID=gene4116;Dbxref=GeneID:4488137;Name=AHA_4120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4120
NC_008570.1	RefSeq	CDS	4566839	4567651	.	+	0	ID=cds3958;Parent=gene4116;Dbxref=Genbank:YP_858544.1,GeneID:4488137;Name=YP_858544.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=YP_858544.1;transl_table=11
NC_008570.1	RefSeq	gene	4567664	4569070	.	+	.	ID=gene4117;Dbxref=GeneID:4488138;Name=AHA_4121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4121
NC_008570.1	RefSeq	CDS	4567664	4569070	.	+	0	ID=cds3959;Parent=gene4117;Dbxref=Genbank:YP_858545.1,GeneID:4488138;Name=YP_858545.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469%3B match to protein family HMM TIGR01470;gbkey=CDS;product=siroheme synthase;protein_id=YP_858545.1;transl_table=11
NC_008570.1	RefSeq	gene	4569143	4570627	.	+	.	ID=gene4118;Dbxref=GeneID:4488139;Name=mgtE-2;gbkey=Gene;gene=mgtE-2;gene_biotype=protein_coding;locus_tag=AHA_4122
NC_008570.1	RefSeq	CDS	4569143	4570627	.	+	0	ID=cds3960;Parent=gene4118;Dbxref=Genbank:YP_858546.1,GeneID:4488139;Name=YP_858546.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400;gbkey=CDS;gene=mgtE-2;product=magnesium transporter;protein_id=YP_858546.1;transl_table=11
NC_008570.1	RefSeq	gene	4570685	4572538	.	-	.	ID=gene4119;Dbxref=GeneID:4488140;Name=AHA_4123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4123
NC_008570.1	RefSeq	CDS	4570685	4572538	.	-	0	ID=cds3961;Parent=gene4119;Dbxref=Genbank:YP_858547.1,GeneID:4488140;Name=YP_858547.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=YP_858547.1;transl_table=11
NC_008570.1	RefSeq	gene	4572685	4573170	.	+	.	ID=gene4120;Dbxref=GeneID:4488141;Name=rraA-2;gbkey=Gene;gene=rraA-2;gene_biotype=protein_coding;locus_tag=AHA_4124
NC_008570.1	RefSeq	CDS	4572685	4573170	.	+	0	ID=cds3962;Parent=gene4120;Dbxref=Genbank:YP_858548.1,GeneID:4488141;Name=YP_858548.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;gene=rraA-2;product=ribonuclease activity regulator protein RraA;protein_id=YP_858548.1;transl_table=11
NC_008570.1	RefSeq	gene	4573439	4574113	.	-	.	ID=gene4121;Dbxref=GeneID:4487478;Name=AHA_4125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4125
NC_008570.1	RefSeq	CDS	4573439	4574113	.	-	0	ID=cds3963;Parent=gene4121;Dbxref=Genbank:YP_858549.1,GeneID:4487478;Name=YP_858549.1;Note=identified by match to protein family HMM PF02592%3B match to protein family HMM TIGR00697;gbkey=CDS;product=hypothetical protein;protein_id=YP_858549.1;transl_table=11
NC_008570.1	RefSeq	gene	4574246	4574569	.	-	.	ID=gene4122;Dbxref=GeneID:4487479;Name=AHA_4126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4126
NC_008570.1	RefSeq	CDS	4574246	4574569	.	-	0	ID=cds3964;Parent=gene4122;Dbxref=Genbank:YP_858550.1,GeneID:4487479;Name=YP_858550.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858550.1;transl_table=11
NC_008570.1	RefSeq	gene	4574544	4575971	.	-	.	ID=gene4123;Dbxref=GeneID:4487480;Name=AHA_4127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4127
NC_008570.1	RefSeq	CDS	4574544	4575971	.	-	0	ID=cds3965;Parent=gene4123;Dbxref=Genbank:YP_858551.1,GeneID:4487480;Name=YP_858551.1;Note=identified by match to protein family HMM PF02696;gbkey=CDS;product=hypothetical protein;protein_id=YP_858551.1;transl_table=11
NC_008570.1	RefSeq	gene	4576075	4576374	.	+	.	ID=gene4124;Dbxref=GeneID:4487481;Name=AHA_4128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4128
NC_008570.1	RefSeq	CDS	4576075	4576374	.	+	0	ID=cds3966;Parent=gene4124;Dbxref=Genbank:YP_858552.1,GeneID:4487481;Name=YP_858552.1;Note=identified by match to protein family HMM PF00034;gbkey=CDS;product=cytochrome c-552;protein_id=YP_858552.1;transl_table=11
NC_008570.1	RefSeq	gene	4576443	4578278	.	-	.	ID=gene4125;Dbxref=GeneID:4487482;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AHA_4129
NC_008570.1	RefSeq	CDS	4576443	4578278	.	-	0	ID=cds3967;Parent=gene4125;Dbxref=Genbank:YP_858553.1,GeneID:4487482;Name=YP_858553.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389;gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase RecQ;protein_id=YP_858553.1;transl_table=11
NC_008570.1	RefSeq	gene	4578421	4578876	.	+	.	ID=gene4126;Dbxref=GeneID:4487483;Name=AHA_4130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4130
NC_008570.1	RefSeq	CDS	4578421	4578876	.	+	0	ID=cds3968;Parent=gene4126;Dbxref=Genbank:YP_858554.1,GeneID:4487483;Name=YP_858554.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;product=thioesterase (4HBT) superfamily protein;protein_id=YP_858554.1;transl_table=11
NC_008570.1	RefSeq	gene	4579001	4579528	.	+	.	ID=gene4127;Dbxref=GeneID:4487484;Name=AHA_4131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4131
NC_008570.1	RefSeq	CDS	4579001	4579528	.	+	0	ID=cds3969;Parent=gene4127;Dbxref=Genbank:YP_858555.1,GeneID:4487484;Name=YP_858555.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858555.1;transl_table=11
NC_008570.1	RefSeq	gene	4579858	4579934	.	-	.	ID=gene4128;Dbxref=GeneID:4487485;Name=AHA_4132;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4132
NC_008570.1	RefSeq	tRNA	4579858	4579934	.	-	.	ID=rna154;Parent=gene4128;Dbxref=GeneID:4487485;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	exon	4579858	4579934	.	-	.	ID=id156;Parent=rna154;Dbxref=GeneID:4487485;gbkey=tRNA;product=tRNA-Pro
NC_008570.1	RefSeq	gene	4580082	4580792	.	-	.	ID=gene4129;Dbxref=GeneID:4487486;Name=AHA_4133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4133
NC_008570.1	RefSeq	CDS	4580082	4580792	.	-	0	ID=cds3970;Parent=gene4129;Dbxref=Genbank:YP_858556.1,GeneID:4487486;Name=YP_858556.1;Note=identified by match to protein family HMM PF03473%3B match to protein family HMM PF03475;gbkey=CDS;product=mosc domain-containing protein;protein_id=YP_858556.1;transl_table=11
NC_008570.1	RefSeq	gene	4580838	4581680	.	-	.	ID=gene4130;Dbxref=GeneID:4487487;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AHA_4134
NC_008570.1	RefSeq	CDS	4580838	4581680	.	-	0	ID=cds3971;Parent=gene4130;Dbxref=Genbank:YP_858557.1,GeneID:4487487;Name=YP_858557.1;Note=identified by similarity to SP:P31136%3B match to protein family HMM PF00528;gbkey=CDS;gene=potI;product=putrescine ABC transporter permease PotI;protein_id=YP_858557.1;transl_table=11
NC_008570.1	RefSeq	gene	4581677	4582579	.	-	.	ID=gene4131;Dbxref=GeneID:4487488;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AHA_4135
NC_008570.1	RefSeq	CDS	4581677	4582579	.	-	0	ID=cds3972;Parent=gene4131;Dbxref=Genbank:YP_858558.1,GeneID:4487488;Name=YP_858558.1;Note=identified by similarity to SP:P31135%3B match to protein family HMM PF00528;gbkey=CDS;gene=potH;product=putrescine ABC transporter permease PotH;protein_id=YP_858558.1;transl_table=11
NC_008570.1	RefSeq	gene	4582579	4583733	.	-	.	ID=gene4132;Dbxref=GeneID:4487489;Name=AHA_4136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4136
NC_008570.1	RefSeq	CDS	4582579	4583733	.	-	0	ID=cds3973;Parent=gene4132;Dbxref=Genbank:YP_858559.1,GeneID:4487489;Name=YP_858559.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01187;gbkey=CDS;product=putrescine transport ATP-binding protein PotG;protein_id=YP_858559.1;transl_table=11
NC_008570.1	RefSeq	gene	4583809	4584894	.	-	.	ID=gene4133;Dbxref=GeneID:4487490;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AHA_4137
NC_008570.1	RefSeq	CDS	4583809	4584894	.	-	0	ID=cds3974;Parent=gene4133;Dbxref=Genbank:YP_858560.1,GeneID:4487490;Name=YP_858560.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;gene=potD;product=spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein;protein_id=YP_858560.1;transl_table=11
NC_008570.1	RefSeq	gene	4585012	4586109	.	-	.	ID=gene4134;Dbxref=GeneID:4487491;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AHA_4138
NC_008570.1	RefSeq	CDS	4585012	4586109	.	-	0	ID=cds3975;Parent=gene4134;Dbxref=Genbank:YP_858561.1,GeneID:4487491;Name=YP_858561.1;Note=identified by similarity to SP:P31133%3B match to protein family HMM PF01547;gbkey=CDS;gene=potF;product=putrescine ABC transporter periplasmic putrescine-binding protein;protein_id=YP_858561.1;transl_table=11
NC_008570.1	RefSeq	gene	4586164	4587525	.	-	.	ID=gene4135;Dbxref=GeneID:4487492;Name=AHA_4139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4139
NC_008570.1	RefSeq	CDS	4586164	4587525	.	-	0	ID=cds3976;Parent=gene4135;Dbxref=Genbank:YP_858562.1,GeneID:4487492;Name=YP_858562.1;Note=identified by match to protein family HMM PF00202;gbkey=CDS;product=aminotransferase;protein_id=YP_858562.1;transl_table=11
NC_008570.1	RefSeq	gene	4587713	4589044	.	-	.	ID=gene4136;Dbxref=GeneID:4487493;Name=AHA_4140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4140
NC_008570.1	RefSeq	CDS	4587713	4589044	.	-	0	ID=cds3977;Parent=gene4136;Dbxref=Genbank:YP_858563.1,GeneID:4487493;Name=YP_858563.1;Note=identified by match to protein family HMM PF00120;gbkey=CDS;product=glutamine synthetase;protein_id=YP_858563.1;transl_table=11
NC_008570.1	RefSeq	gene	4589513	4589899	.	+	.	ID=gene4137;Dbxref=GeneID:4487494;Name=AHA_4141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4141
NC_008570.1	RefSeq	CDS	4589513	4589899	.	+	0	ID=cds3978;Parent=gene4137;Dbxref=Genbank:YP_858564.1,GeneID:4487494;Name=YP_858564.1;Note=identified by match to protein family HMM PF01258;gbkey=CDS;product=RNA polymerase-binding protein DksA;protein_id=YP_858564.1;transl_table=11
NC_008570.1	RefSeq	gene	4590070	4590927	.	+	.	ID=gene4138;Dbxref=GeneID:4487495;Name=AHA_4142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4142
NC_008570.1	RefSeq	CDS	4590070	4590927	.	+	0	ID=cds3979;Parent=gene4138;Dbxref=Genbank:YP_858565.1,GeneID:4487495;Name=YP_858565.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858565.1;transl_table=11
NC_008570.1	RefSeq	gene	4590979	4591425	.	+	.	ID=gene4139;Dbxref=GeneID:4487496;Name=AHA_4143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4143
NC_008570.1	RefSeq	CDS	4590979	4591425	.	+	0	ID=cds3980;Parent=gene4139;Dbxref=Genbank:YP_858566.1,GeneID:4487496;Name=YP_858566.1;Note=identified by similarity to GB:AAS70268.1%3B match to protein family HMM PF06127;gbkey=CDS;product=hypothetical protein;protein_id=YP_858566.1;transl_table=11
NC_008570.1	RefSeq	gene	4591447	4591926	.	+	.	ID=gene4140;Dbxref=GeneID:4487497;Name=AHA_4144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4144
NC_008570.1	RefSeq	CDS	4591447	4591926	.	+	0	ID=cds3981;Parent=gene4140;Dbxref=Genbank:YP_858567.1,GeneID:4487497;Name=YP_858567.1;Note=identified by match to protein family HMM PF05981;gbkey=CDS;product=CreA family protein;protein_id=YP_858567.1;transl_table=11
NC_008570.1	RefSeq	gene	4592004	4592993	.	+	.	ID=gene4141;Dbxref=GeneID:4490029;Name=AHA_4145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4145
NC_008570.1	RefSeq	CDS	4592004	4592993	.	+	0	ID=cds3982;Parent=gene4141;Dbxref=Genbank:YP_858568.1,GeneID:4490029;Name=YP_858568.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;product=D-lactate dehydrogenase;protein_id=YP_858568.1;transl_table=11
NC_008570.1	RefSeq	gene	4593085	4594464	.	+	.	ID=gene4142;Dbxref=GeneID:4490030;Name=AHA_4146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4146
NC_008570.1	RefSeq	CDS	4593085	4594464	.	+	0	ID=cds3983;Parent=gene4142;Dbxref=Genbank:YP_858569.1,GeneID:4490030;Name=YP_858569.1;gbkey=CDS;product=chaperone;protein_id=YP_858569.1;transl_table=11
NC_008570.1	RefSeq	gene	4594436	4595038	.	+	.	ID=gene4143;Dbxref=GeneID:4490031;Name=AHA_4147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4147
NC_008570.1	RefSeq	CDS	4594436	4595038	.	+	0	ID=cds3984;Parent=gene4143;Dbxref=Genbank:YP_858570.1,GeneID:4490031;Name=YP_858570.1;Note=identified by match to protein family HMM PF03724;gbkey=CDS;product=heat shock protein HslJ;protein_id=YP_858570.1;transl_table=11
NC_008570.1	RefSeq	gene	4595109	4595957	.	+	.	ID=gene4144;Dbxref=GeneID:4490032;Name=AHA_4148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4148
NC_008570.1	RefSeq	CDS	4595109	4595957	.	+	0	ID=cds3985;Parent=gene4144;Dbxref=Genbank:YP_858571.1,GeneID:4490032;Name=YP_858571.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858571.1;transl_table=11
NC_008570.1	RefSeq	gene	4596071	4597792	.	+	.	ID=gene4145;Dbxref=GeneID:4490033;Name=AHA_4149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4149
NC_008570.1	RefSeq	CDS	4596071	4597792	.	+	0	ID=cds3986;Parent=gene4145;Dbxref=Genbank:YP_858572.1,GeneID:4490033;Name=YP_858572.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=maltodextrin glucosidase;protein_id=YP_858572.1;transl_table=11
NC_008570.1	RefSeq	gene	4598015	4599019	.	+	.	ID=gene4146;Dbxref=GeneID:4490034;Name=AHA_4150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4150
NC_008570.1	RefSeq	CDS	4598015	4599019	.	+	0	ID=cds3987;Parent=gene4146;Dbxref=Genbank:YP_858573.1,GeneID:4490034;Name=YP_858573.1;Note=identified by similarity to GB:AAD45656.2%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=lipopolysaccharide O-Ag biosynthesis protein FlmA;protein_id=YP_858573.1;transl_table=11
NC_008570.1	RefSeq	gene	4599016	4600149	.	+	.	ID=gene4147;Dbxref=GeneID:4490035;Name=flmB;gbkey=Gene;gene=flmB;gene_biotype=protein_coding;locus_tag=AHA_4151
NC_008570.1	RefSeq	CDS	4599016	4600149	.	+	0	ID=cds3988;Parent=gene4147;Dbxref=Genbank:YP_858574.1,GeneID:4490035;Name=YP_858574.1;Note=identified by similarity to GB:AAD45657.1%3B match to protein family HMM PF01041%3B match to protein family HMM PF01212;gbkey=CDS;gene=flmB;product=lipopolysaccharide O-Ag biosynthesis protein FlmB;protein_id=YP_858574.1;transl_table=11
NC_008570.1	RefSeq	gene	4600278	4601033	.	-	.	ID=gene4148;Dbxref=GeneID:4490036;Name=AHA_4152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4152
NC_008570.1	RefSeq	CDS	4600278	4601033	.	-	0	ID=cds3989;Parent=gene4148;Dbxref=Genbank:YP_858575.1,GeneID:4490036;Name=YP_858575.1;Note=identified by match to protein family HMM PF00483;gbkey=CDS;product=transferase;protein_id=YP_858575.1;transl_table=11
NC_008570.1	RefSeq	gene	4601040	4601678	.	-	.	ID=gene4149;Dbxref=GeneID:4490037;Name=AHA_4153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4153
NC_008570.1	RefSeq	CDS	4601040	4601678	.	-	0	ID=cds3990;Parent=gene4149;Dbxref=Genbank:YP_858576.1,GeneID:4490037;Name=YP_858576.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858576.1;transl_table=11
NC_008570.1	RefSeq	gene	4601675	4604071	.	-	.	ID=gene4150;Dbxref=GeneID:4490038;Name=AHA_4154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4154
NC_008570.1	RefSeq	CDS	4601675	4604071	.	-	0	ID=cds3991;Parent=gene4150;Dbxref=Genbank:YP_858577.1,GeneID:4490038;Name=YP_858577.1;Note=identified by similarity to GB:AAP78033.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858577.1;transl_table=11
NC_008570.1	RefSeq	gene	4604068	4604790	.	-	.	ID=gene4151;Dbxref=GeneID:4490039;Name=AHA_4155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4155
NC_008570.1	RefSeq	CDS	4604068	4604790	.	-	0	ID=cds3992;Parent=gene4151;Dbxref=Genbank:YP_858578.1,GeneID:4490039;Name=YP_858578.1;gbkey=CDS;product=methionyl-tRNA formyltransferase-like protein;protein_id=YP_858578.1;transl_table=11
NC_008570.1	RefSeq	gene	4604787	4605362	.	-	.	ID=gene4152;Dbxref=GeneID:4490040;Name=AHA_4156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4156
NC_008570.1	RefSeq	CDS	4604787	4605362	.	-	0	ID=cds3993;Parent=gene4152;Dbxref=Genbank:YP_858579.1,GeneID:4490040;Name=YP_858579.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858579.1;transl_table=11
NC_008570.1	RefSeq	gene	4605362	4605883	.	-	.	ID=gene4153;Dbxref=GeneID:4490041;Name=AHA_4157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4157
NC_008570.1	RefSeq	CDS	4605362	4605883	.	-	0	ID=cds3994;Parent=gene4153;Dbxref=Genbank:YP_858580.1,GeneID:4490041;Name=YP_858580.1;Note=identified by match to protein family HMM PF01583;gbkey=CDS;product=adenylylsulfate kinase;protein_id=YP_858580.1;transl_table=11
NC_008570.1	RefSeq	gene	4605931	4606887	.	-	.	ID=gene4154;Dbxref=GeneID:4490042;Name=AHA_4158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4158
NC_008570.1	RefSeq	CDS	4605931	4606887	.	-	0	ID=cds3995;Parent=gene4154;Dbxref=Genbank:YP_858581.1,GeneID:4490042;Name=YP_858581.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858581.1;transl_table=11
NC_008570.1	RefSeq	gene	4606989	4608884	.	-	.	ID=gene4155;Dbxref=GeneID:4490043;Name=AHA_4159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4159
NC_008570.1	RefSeq	CDS	4606989	4608884	.	-	0	ID=cds3996;Parent=gene4155;Dbxref=Genbank:YP_858582.1,GeneID:4490043;Name=YP_858582.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858582.1;transl_table=11
NC_008570.1	RefSeq	gene	4608995	4610074	.	-	.	ID=gene4156;Dbxref=GeneID:4490044;Name=AHA_4160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4160
NC_008570.1	RefSeq	CDS	4608995	4610074	.	-	0	ID=cds3997;Parent=gene4156;Dbxref=Genbank:YP_858583.1,GeneID:4490044;Name=YP_858583.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858583.1;transl_table=11
NC_008570.1	RefSeq	gene	4610187	4610966	.	-	.	ID=gene4157;Dbxref=GeneID:4490045;Name=AHA_4161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4161
NC_008570.1	RefSeq	CDS	4610187	4610966	.	-	0	ID=cds3998;Parent=gene4157;Dbxref=Genbank:YP_858584.1,GeneID:4490045;Name=YP_858584.1;Note=identified by match to protein family HMM PF04989;gbkey=CDS;product=cephalosporin hydroxylase;protein_id=YP_858584.1;transl_table=11
NC_008570.1	RefSeq	gene	4610986	4612092	.	-	.	ID=gene4158;Dbxref=GeneID:4490046;Name=AHA_4162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4162
NC_008570.1	RefSeq	CDS	4610986	4612092	.	-	0	ID=cds3999;Parent=gene4158;Dbxref=Genbank:YP_858585.1,GeneID:4490046;Name=YP_858585.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM PF01041%3B match to protein family HMM PF01212;gbkey=CDS;product=spore coat polysaccharide biosynthesis protein SpsC;protein_id=YP_858585.1;transl_table=11
NC_008570.1	RefSeq	gene	4612089	4613312	.	-	.	ID=gene4159;Dbxref=GeneID:4490047;Name=AHA_4163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4163
NC_008570.1	RefSeq	CDS	4612089	4613312	.	-	0	ID=cds4000;Parent=gene4159;Dbxref=Genbank:YP_858586.1,GeneID:4490047;Name=YP_858586.1;Note=identified by similarity to GB:BAA16904.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858586.1;transl_table=11
NC_008570.1	RefSeq	gene	4613309	4613872	.	-	.	ID=gene4160;Dbxref=GeneID:4489216;Name=rfbC-2;gbkey=Gene;gene=rfbC-2;gene_biotype=protein_coding;locus_tag=AHA_4164
NC_008570.1	RefSeq	CDS	4613309	4613872	.	-	0	ID=cds4001;Parent=gene4160;Dbxref=Genbank:YP_858587.1,GeneID:4489216;Name=YP_858587.1;Note=identified by match to protein family HMM PF00908;gbkey=CDS;gene=rfbC-2;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=YP_858587.1;transl_table=11
NC_008570.1	RefSeq	gene	4613869	4614936	.	-	.	ID=gene4161;Dbxref=GeneID:4489217;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=AHA_4165
NC_008570.1	RefSeq	CDS	4613869	4614936	.	-	0	ID=cds4002;Parent=gene4161;Dbxref=Genbank:YP_858588.1,GeneID:4489217;Name=YP_858588.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR02622;gbkey=CDS;gene=rfbG;product=CDP-glucose 4%2C6-dehydratase;protein_id=YP_858588.1;transl_table=11
NC_008570.1	RefSeq	gene	4614933	4615706	.	-	.	ID=gene4162;Dbxref=GeneID:4489218;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=AHA_4166
NC_008570.1	RefSeq	CDS	4614933	4615706	.	-	0	ID=cds4003;Parent=gene4162;Dbxref=Genbank:YP_858589.1,GeneID:4489218;Name=YP_858589.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02623;gbkey=CDS;gene=rfbF;product=glucose-1-phosphate cytidylyltransferase;protein_id=YP_858589.1;transl_table=11
NC_008570.1	RefSeq	gene	4615748	4616581	.	-	.	ID=gene4163;Dbxref=GeneID:4489219;Name=AHA_4167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4167
NC_008570.1	RefSeq	CDS	4615748	4616581	.	-	0	ID=cds4004;Parent=gene4163;Dbxref=Genbank:YP_858590.1,GeneID:4489219;Name=YP_858590.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_858590.1;transl_table=11
NC_008570.1	RefSeq	gene	4616605	4617909	.	-	.	ID=gene4164;Dbxref=GeneID:4489220;Name=AHA_4168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4168
NC_008570.1	RefSeq	CDS	4616605	4617909	.	-	0	ID=cds4005;Parent=gene4164;Dbxref=Genbank:YP_858591.1,GeneID:4489220;Name=YP_858591.1;Note=identified by match to protein family HMM PF00984%3B match to protein family HMM PF03446%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026;gbkey=CDS;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=YP_858591.1;transl_table=11
NC_008570.1	RefSeq	gene	4617943	4619079	.	-	.	ID=gene4165;Dbxref=GeneID:4489221;Name=AHA_4169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4169
NC_008570.1	RefSeq	CDS	4617943	4619079	.	-	0	ID=cds4006;Parent=gene4165;Dbxref=Genbank:YP_858592.1,GeneID:4489221;Name=YP_858592.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=YP_858592.1;transl_table=11
NC_008570.1	RefSeq	gene	4620296	4621396	.	-	.	ID=gene4166;Dbxref=GeneID:4489222;Name=AHA_4170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4170
NC_008570.1	RefSeq	CDS	4620296	4621396	.	-	0	ID=cds4007;Parent=gene4166;Dbxref=Genbank:YP_858593.1,GeneID:4489222;Name=YP_858593.1;Note=identified by match to protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_858593.1;transl_table=11
NC_008570.1	RefSeq	gene	4621433	4622389	.	-	.	ID=gene4167;Dbxref=GeneID:4489223;Name=AHA_4171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4171
NC_008570.1	RefSeq	CDS	4621433	4622389	.	-	0	ID=cds4008;Parent=gene4167;Dbxref=Genbank:YP_858594.1,GeneID:4489223;Name=YP_858594.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase;protein_id=YP_858594.1;transl_table=11
NC_008570.1	RefSeq	gene	4622548	4623735	.	-	.	ID=gene4168;Dbxref=GeneID:4489224;Name=AHA_4172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4172
NC_008570.1	RefSeq	CDS	4622548	4623735	.	-	0	ID=cds4009;Parent=gene4168;Dbxref=Genbank:YP_858595.1,GeneID:4489224;Name=YP_858595.1;gbkey=CDS;product=acyl-CoA reductase LuxC;protein_id=YP_858595.1;transl_table=11
NC_008570.1	RefSeq	gene	4623732	4624790	.	-	.	ID=gene4169;Dbxref=GeneID:4489225;Name=AHA_4173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4173
NC_008570.1	RefSeq	CDS	4623732	4624790	.	-	0	ID=cds4010;Parent=gene4169;Dbxref=Genbank:YP_858596.1,GeneID:4489225;Name=YP_858596.1;gbkey=CDS;product=long-chain-fatty-acid--luciferin-component ligase%2C Acyl-protein synthase;protein_id=YP_858596.1;transl_table=11
NC_008570.1	RefSeq	gene	4624790	4626160	.	-	.	ID=gene4170;Dbxref=GeneID:4489226;Name=AHA_4174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4174
NC_008570.1	RefSeq	CDS	4624790	4626160	.	-	0	ID=cds4011;Parent=gene4170;Dbxref=Genbank:YP_858597.1,GeneID:4489226;Name=YP_858597.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain fatty acid-CoA ligase;protein_id=YP_858597.1;transl_table=11
NC_008570.1	RefSeq	gene	4626160	4626909	.	-	.	ID=gene4171;Dbxref=GeneID:4489227;Name=AHA_4175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4175
NC_008570.1	RefSeq	CDS	4626160	4626909	.	-	0	ID=cds4012;Parent=gene4171;Dbxref=Genbank:YP_858598.1,GeneID:4489227;Name=YP_858598.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=YP_858598.1;transl_table=11
NC_008570.1	RefSeq	gene	4626909	4627142	.	-	.	ID=gene4172;Dbxref=GeneID:4489228;Name=AHA_4176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4176
NC_008570.1	RefSeq	CDS	4626909	4627142	.	-	0	ID=cds4013;Parent=gene4172;Dbxref=Genbank:YP_858599.1,GeneID:4489228;Name=YP_858599.1;Note=identified by similarity to GB:2203284A;gbkey=CDS;product=hypothetical protein;protein_id=YP_858599.1;transl_table=11
NC_008570.1	RefSeq	gene	4627139	4627675	.	-	.	ID=gene4173;Dbxref=GeneID:4489229;Name=AHA_4177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4177
NC_008570.1	RefSeq	CDS	4627139	4627675	.	-	0	ID=cds4014;Parent=gene4173;Dbxref=Genbank:YP_858600.1,GeneID:4489229;Name=YP_858600.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858600.1;transl_table=11
NC_008570.1	RefSeq	gene	4627840	4628535	.	+	.	ID=gene4174;Dbxref=GeneID:4489230;Name=AHA_4178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4178
NC_008570.1	RefSeq	CDS	4627840	4628535	.	+	0	ID=cds4015;Parent=gene4174;Dbxref=Genbank:YP_858601.1,GeneID:4489230;Name=YP_858601.1;Note=identified by match to protein family HMM PF02348;gbkey=CDS;product=NeuA protein;protein_id=YP_858601.1;transl_table=11
NC_008570.1	RefSeq	gene	4628525	4629781	.	+	.	ID=gene4175;Dbxref=GeneID:4489231;Name=AHA_4179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4179
NC_008570.1	RefSeq	CDS	4628525	4629781	.	+	0	ID=cds4016;Parent=gene4175;Dbxref=Genbank:YP_858602.1,GeneID:4489231;Name=YP_858602.1;Note=identified by similarity to GB:AAD45659.1;gbkey=CDS;product=FlmD protein;protein_id=YP_858602.1;transl_table=11
NC_008570.1	RefSeq	gene	4629788	4630834	.	+	.	ID=gene4176;Dbxref=GeneID:4490532;Name=nueB;gbkey=Gene;gene=nueB;gene_biotype=protein_coding;locus_tag=AHA_4180
NC_008570.1	RefSeq	CDS	4629788	4630834	.	+	0	ID=cds4017;Parent=gene4176;Dbxref=Genbank:YP_858603.1,GeneID:4490532;Name=YP_858603.1;Note=identified by similarity to GB:AAD45660.1%3B match to protein family HMM PF01354%3B match to protein family HMM PF03102;gbkey=CDS;gene=nueB;product=pseudaminic acid synthase%2C NeuB;protein_id=YP_858603.1;transl_table=11
NC_008570.1	RefSeq	gene	4630827	4632122	.	+	.	ID=gene4177;Dbxref=GeneID:4490533;Name=AHA_4181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4181
NC_008570.1	RefSeq	CDS	4630827	4632122	.	+	0	ID=cds4018;Parent=gene4177;Dbxref=Genbank:YP_858604.1,GeneID:4490533;Name=YP_858604.1;Note=identified by similarity to GB:AAY90924.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858604.1;transl_table=11
NC_008570.1	RefSeq	gene	4632119	4632379	.	+	.	ID=gene4178;Dbxref=GeneID:4490534;Name=AHA_4182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4182
NC_008570.1	RefSeq	CDS	4632119	4632379	.	+	0	ID=cds4019;Parent=gene4178;Dbxref=Genbank:YP_858605.1,GeneID:4490534;Name=YP_858605.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858605.1;transl_table=11
NC_008570.1	RefSeq	gene	4632415	4632507	.	+	.	ID=gene4179;Dbxref=GeneID:4490535;Name=AHA_4184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4184
NC_008570.1	RefSeq	CDS	4632415	4632507	.	+	0	ID=cds4020;Parent=gene4179;Dbxref=Genbank:YP_858606.1,GeneID:4490535;Name=YP_858606.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858606.1;transl_table=11
NC_008570.1	RefSeq	gene	4632497	4633858	.	-	.	ID=gene4180;Dbxref=GeneID:4490536;Name=AHA_4183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4183
NC_008570.1	RefSeq	CDS	4632497	4633858	.	-	0	ID=cds4021;Parent=gene4180;Dbxref=Genbank:YP_858607.1,GeneID:4490536;Name=YP_858607.1;Note=identified by similarity to GB:AAR35342.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858607.1;transl_table=11
NC_008570.1	RefSeq	gene	4633855	4634259	.	-	.	ID=gene4181;Dbxref=GeneID:4490537;Name=AHA_4185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4185
NC_008570.1	RefSeq	CDS	4633855	4634259	.	-	0	ID=cds4022;Parent=gene4181;Dbxref=Genbank:YP_858608.1,GeneID:4490537;Name=YP_858608.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase;protein_id=YP_858608.1;transl_table=11
NC_008570.1	RefSeq	gene	4634249	4635013	.	-	.	ID=gene4182;Dbxref=GeneID:4490538;Name=AHA_4186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4186
NC_008570.1	RefSeq	CDS	4634249	4635013	.	-	0	ID=cds4023;Parent=gene4182;Dbxref=Genbank:YP_858609.1,GeneID:4490538;Name=YP_858609.1;gbkey=CDS;product=aminoglycoside 3-N-acetyltransferase family protein;protein_id=YP_858609.1;transl_table=11
NC_008570.1	RefSeq	gene	4635010	4635234	.	-	.	ID=gene4183;Dbxref=GeneID:4490539;Name=AHA_4187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4187
NC_008570.1	RefSeq	CDS	4635010	4635234	.	-	0	ID=cds4024;Parent=gene4183;Dbxref=Genbank:YP_858610.1,GeneID:4490539;Name=YP_858610.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858610.1;transl_table=11
NC_008570.1	RefSeq	gene	4635227	4636903	.	-	.	ID=gene4184;Dbxref=GeneID:4490540;Name=AHA_4188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4188
NC_008570.1	RefSeq	CDS	4635227	4636903	.	-	0	ID=cds4025;Parent=gene4184;Dbxref=Genbank:YP_858611.1,GeneID:4490540;Name=YP_858611.1;Note=identified by match to protein family HMM TIGR01681%3B match to protein family HMM TIGR01686;gbkey=CDS;product=FkbH domain-containing protein;protein_id=YP_858611.1;transl_table=11
NC_008570.1	RefSeq	gene	4637007	4637540	.	-	.	ID=gene4185;Dbxref=GeneID:4490541;Name=AHA_4189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4189
NC_008570.1	RefSeq	CDS	4637007	4637540	.	-	0	ID=cds4026;Parent=gene4185;Dbxref=Genbank:YP_858612.1,GeneID:4490541;Name=YP_858612.1;Note=identified by match to protein family HMM PF01923;gbkey=CDS;product=ATP:cob(I)alamin adenosyltransferase;protein_id=YP_858612.1;transl_table=11
NC_008570.1	RefSeq	gene	4637628	4638770	.	-	.	ID=gene4186;Dbxref=GeneID:4490542;Name=AHA_4190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4190
NC_008570.1	RefSeq	CDS	4637628	4638770	.	-	0	ID=cds4027;Parent=gene4186;Dbxref=Genbank:YP_858613.1,GeneID:4490542;Name=YP_858613.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858613.1;transl_table=11
NC_008570.1	RefSeq	gene	4638941	4640074	.	+	.	ID=gene4187;Dbxref=GeneID:4490543;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AHA_4191
NC_008570.1	RefSeq	CDS	4638941	4640074	.	+	0	ID=cds4028;Parent=gene4187;Dbxref=Genbank:YP_858614.1,GeneID:4490543;Name=YP_858614.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;gene=trmA;product=tRNA (uracil-5-)-methyltransferase;protein_id=YP_858614.1;transl_table=11
NC_008570.1	RefSeq	gene	4640264	4641022	.	+	.	ID=gene4188;Dbxref=GeneID:4490544;Name=AHA_4192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4192
NC_008570.1	RefSeq	CDS	4640264	4641022	.	+	0	ID=cds4029;Parent=gene4188;Dbxref=Genbank:YP_858615.1,GeneID:4490544;Name=YP_858615.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=DNA-binding transcriptional regulator RstA;protein_id=YP_858615.1;transl_table=11
NC_008570.1	RefSeq	gene	4641139	4642464	.	+	.	ID=gene4189;Dbxref=GeneID:4490545;Name=AHA_4193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4193
NC_008570.1	RefSeq	CDS	4641139	4642464	.	+	0	ID=cds4030;Parent=gene4189;Dbxref=Genbank:YP_858616.1,GeneID:4490545;Name=YP_858616.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor protein RstB;protein_id=YP_858616.1;transl_table=11
NC_008570.1	RefSeq	gene	4642474	4642701	.	+	.	ID=gene4190;Dbxref=GeneID:4490546;Name=AHA_4194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4194
NC_008570.1	RefSeq	CDS	4642474	4642701	.	+	0	ID=cds4031;Parent=gene4190;Dbxref=Genbank:YP_858617.1,GeneID:4490546;Name=YP_858617.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858617.1;transl_table=11
NC_008570.1	RefSeq	gene	4642778	4644034	.	-	.	ID=gene4191;Dbxref=GeneID:4490547;Name=AHA_4195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4195
NC_008570.1	RefSeq	CDS	4642778	4644034	.	-	0	ID=cds4032;Parent=gene4191;Dbxref=Genbank:YP_858618.1,GeneID:4490547;Name=YP_858618.1;Note=identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=YP_858618.1;transl_table=11
NC_008570.1	RefSeq	gene	4644216	4645673	.	-	.	ID=gene4192;Dbxref=GeneID:4490548;Name=AHA_4196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4196
NC_008570.1	RefSeq	CDS	4644216	4645673	.	-	0	ID=cds4033;Parent=gene4192;Dbxref=Genbank:YP_858619.1,GeneID:4490548;Name=YP_858619.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF05368;gbkey=CDS;product=nucleoside-diphosphate-sugar epimerase;protein_id=YP_858619.1;transl_table=11
NC_008570.1	RefSeq	gene	4645817	4646044	.	-	.	ID=gene4193;Dbxref=GeneID:4490549;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AHA_4197
NC_008570.1	RefSeq	CDS	4645817	4646044	.	-	0	ID=cds4034;Parent=gene4193;Dbxref=Genbank:YP_858620.1,GeneID:4490549;Name=YP_858620.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=YP_858620.1;transl_table=11
NC_008570.1	RefSeq	gene	4646180	4648387	.	+	.	ID=gene4194;Dbxref=GeneID:4490550;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AHA_4198
NC_008570.1	RefSeq	CDS	4646180	4648387	.	+	0	ID=cds4035;Parent=gene4194;Dbxref=Genbank:YP_858621.1,GeneID:4490550;Name=YP_858621.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595;gbkey=CDS;gene=priA;product=primosomal protein N';protein_id=YP_858621.1;transl_table=11
NC_008570.1	RefSeq	gene	4648467	4649567	.	-	.	ID=gene4195;Dbxref=GeneID:4489853;Name=AHA_4199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4199
NC_008570.1	RefSeq	CDS	4648467	4649567	.	-	0	ID=cds4036;Parent=gene4195;Dbxref=Genbank:YP_858622.1,GeneID:4489853;Name=YP_858622.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858622.1;transl_table=11
NC_008570.1	RefSeq	gene	4649744	4650850	.	-	.	ID=gene4196;Dbxref=GeneID:4489854;Name=AHA_4200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4200
NC_008570.1	RefSeq	CDS	4649744	4650850	.	-	0	ID=cds4037;Parent=gene4196;Dbxref=Genbank:YP_858623.1,GeneID:4489854;Name=YP_858623.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=YP_858623.1;transl_table=11
NC_008570.1	RefSeq	gene	4651098	4652618	.	-	.	ID=gene4197;Dbxref=GeneID:4489855;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AHA_4201
NC_008570.1	RefSeq	CDS	4651098	4652618	.	-	0	ID=cds4038;Parent=gene4197;Dbxref=Genbank:YP_858624.1,GeneID:4489855;Name=YP_858624.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;gene=ilvA;product=threonine dehydratase;protein_id=YP_858624.1;transl_table=11
NC_008570.1	RefSeq	gene	4652622	4654589	.	-	.	ID=gene4198;Dbxref=GeneID:4489856;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AHA_4202
NC_008570.1	RefSeq	CDS	4652622	4654589	.	-	0	ID=cds4039;Parent=gene4198;Dbxref=Genbank:YP_858625.1,GeneID:4489856;Name=YP_858625.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=YP_858625.1;transl_table=11
NC_008570.1	RefSeq	gene	4654608	4655552	.	-	.	ID=gene4199;Dbxref=GeneID:4489857;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AHA_4203
NC_008570.1	RefSeq	CDS	4654608	4655552	.	-	0	ID=cds4040;Parent=gene4199;Dbxref=Genbank:YP_858626.1,GeneID:4489857;Name=YP_858626.1;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=YP_858626.1;transl_table=11
NC_008570.1	RefSeq	gene	4655813	4657459	.	-	.	ID=gene4200;Dbxref=GeneID:4489858;Name=ilvB-2;gbkey=Gene;gene=ilvB-2;gene_biotype=protein_coding;locus_tag=AHA_4204
NC_008570.1	RefSeq	CDS	4655813	4657459	.	-	0	ID=cds4041;Parent=gene4200;Dbxref=Genbank:YP_858627.1,GeneID:4489858;Name=YP_858627.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;gene=ilvB-2;product=acetolactate synthase 2 catalytic subunit;protein_id=YP_858627.1;transl_table=11
NC_008570.1	RefSeq	gene	4657546	4657644	.	-	.	ID=gene4201;Dbxref=GeneID:4489859;Name=AHA_4205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4205
NC_008570.1	RefSeq	CDS	4657546	4657644	.	-	0	ID=cds4042;Parent=gene4201;Dbxref=Genbank:YP_858628.1,GeneID:4489859;Name=YP_858628.1;gbkey=CDS;product=ilvBEDA operon leader peptide;protein_id=YP_858628.1;transl_table=11
NC_008570.1	RefSeq	gene	4657843	4659357	.	+	.	ID=gene4202;Dbxref=GeneID:4489860;Name=AHA_4206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4206
NC_008570.1	RefSeq	CDS	4657843	4659357	.	+	0	ID=cds4043;Parent=gene4202;Dbxref=Genbank:YP_858629.1,GeneID:4489860;Name=YP_858629.1;Note=identified by match to protein family HMM PF01078%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00368;gbkey=CDS;product=Mg chelatase-like protein;protein_id=YP_858629.1;transl_table=11
NC_008570.1	RefSeq	gene	4659478	4660392	.	+	.	ID=gene4203;Dbxref=GeneID:4489861;Name=AHA_4207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4207
NC_008570.1	RefSeq	CDS	4659478	4660392	.	+	0	ID=cds4044;Parent=gene4203;Dbxref=Genbank:YP_858630.1,GeneID:4489861;Name=YP_858630.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=acyltransferase;protein_id=YP_858630.1;transl_table=11
NC_008570.1	RefSeq	gene	4660308	4661342	.	+	.	ID=gene4204;Dbxref=GeneID:4489862;Name=AHA_4209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4209
NC_008570.1	RefSeq	CDS	4660308	4661342	.	+	0	ID=cds4045;Parent=gene4204;Dbxref=Genbank:YP_858631.1,GeneID:4489862;Name=YP_858631.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=acyltransferase;protein_id=YP_858631.1;transl_table=11
NC_008570.1	RefSeq	gene	4661288	4661773	.	-	.	ID=gene4205;Dbxref=GeneID:4489863;Name=AHA_4208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4208
NC_008570.1	RefSeq	CDS	4661288	4661773	.	-	0	ID=cds4046;Parent=gene4205;Dbxref=Genbank:YP_858632.1,GeneID:4489863;Name=YP_858632.1;Note=identified by match to protein family HMM PF04463;gbkey=CDS;product=hypothetical protein;protein_id=YP_858632.1;transl_table=11
NC_008570.1	RefSeq	gene	4661871	4662521	.	-	.	ID=gene4206;Dbxref=GeneID:4489864;Name=AHA_4210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4210
NC_008570.1	RefSeq	CDS	4661871	4662521	.	-	0	ID=cds4047;Parent=gene4206;Dbxref=Genbank:YP_858633.1,GeneID:4489864;Name=YP_858633.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=YP_858633.1;transl_table=11
NC_008570.1	RefSeq	gene	4662597	4663232	.	+	.	ID=gene4207;Dbxref=GeneID:4489865;Name=AHA_4211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4211
NC_008570.1	RefSeq	CDS	4662597	4663232	.	+	0	ID=cds4048;Parent=gene4207;Dbxref=Genbank:YP_858634.1,GeneID:4489865;Name=YP_858634.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=pyrazinamidase/nicotinamidase;protein_id=YP_858634.1;transl_table=11
NC_008570.1	RefSeq	gene	4663334	4664512	.	+	.	ID=gene4208;Dbxref=GeneID:4489866;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AHA_4212
NC_008570.1	RefSeq	CDS	4663334	4664512	.	+	0	ID=cds4049;Parent=gene4208;Dbxref=Genbank:YP_858635.1,GeneID:4489866;Name=YP_858635.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;gene=pncB;product=nicotinate phosphoribosyltransferase;protein_id=YP_858635.1;transl_table=11
NC_008570.1	RefSeq	gene	4664637	4665482	.	+	.	ID=gene4209;Dbxref=GeneID:4489867;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AHA_4213
NC_008570.1	RefSeq	CDS	4664637	4665482	.	+	0	ID=cds4050;Parent=gene4209;Dbxref=Genbank:YP_858636.1,GeneID:4489867;Name=YP_858636.1;Note=identified by match to protein family HMM TIGR01098;gbkey=CDS;gene=phnD;product=phosphonate ABC transporter periplasmic phosphonate-binding protein;protein_id=YP_858636.1;transl_table=11
NC_008570.1	RefSeq	gene	4665479	4666240	.	+	.	ID=gene4210;Dbxref=GeneID:4489868;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AHA_4214
NC_008570.1	RefSeq	CDS	4665479	4666240	.	+	0	ID=cds4051;Parent=gene4210;Dbxref=Genbank:YP_858637.1,GeneID:4489868;Name=YP_858637.1;Note=identified by similarity to SP:Q88PM5%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR02315;gbkey=CDS;gene=phnC;product=phosphonate ABC transporter ATPase;protein_id=YP_858637.1;transl_table=11
NC_008570.1	RefSeq	gene	4666240	4667775	.	+	.	ID=gene4211;Dbxref=GeneID:4489869;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AHA_4215
NC_008570.1	RefSeq	CDS	4666240	4667775	.	+	0	ID=cds4052;Parent=gene4211;Dbxref=Genbank:YP_858638.1,GeneID:4489869;Name=YP_858638.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097;gbkey=CDS;gene=phnE;product=phosphonate ABC transporter permease;protein_id=YP_858638.1;transl_table=11
NC_008570.1	RefSeq	gene	4667879	4668487	.	-	.	ID=gene4212;Dbxref=GeneID:4489870;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AHA_4216
NC_008570.1	RefSeq	CDS	4667879	4668487	.	-	0	ID=cds4053;Parent=gene4212;Dbxref=Genbank:YP_858639.1,GeneID:4489870;Name=YP_858639.1;Note=identified by similarity to SP:P24991%3B match to protein family HMM PF01323;gbkey=CDS;gene=dsbA;product=thiol:disulfide interchange protein DsbA;protein_id=YP_858639.1;transl_table=11
NC_008570.1	RefSeq	gene	4668625	4669614	.	-	.	ID=gene4213;Dbxref=GeneID:4489871;Name=AHA_4217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4217
NC_008570.1	RefSeq	CDS	4668625	4669614	.	-	0	ID=cds4054;Parent=gene4213;Dbxref=Genbank:YP_858640.1,GeneID:4489871;Name=YP_858640.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=YP_858640.1;transl_table=11
NC_008570.1	RefSeq	gene	4669706	4671154	.	-	.	ID=gene4214;Dbxref=GeneID:4489872;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=AHA_4218
NC_008570.1	RefSeq	CDS	4669706	4671154	.	-	0	ID=cds4055;Parent=gene4214;Dbxref=Genbank:YP_858641.1,GeneID:4489872;Name=YP_858641.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR02745;gbkey=CDS;gene=ccoG;product=cytochrome c oxidase accessory protein CcoG;protein_id=YP_858641.1;transl_table=11
NC_008570.1	RefSeq	gene	4671354	4671617	.	-	.	ID=gene4215;Dbxref=GeneID:4487988;Name=AHA_4219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4219
NC_008570.1	RefSeq	CDS	4671354	4671617	.	-	0	ID=cds4056;Parent=gene4215;Dbxref=Genbank:YP_858642.1,GeneID:4487988;Name=YP_858642.1;Note=identified by match to protein family HMM PF06288;gbkey=CDS;product=hypothetical protein;protein_id=YP_858642.1;transl_table=11
NC_008570.1	RefSeq	gene	4671648	4672763	.	-	.	ID=gene4216;Dbxref=GeneID:4487989;Name=AHA_4220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4220
NC_008570.1	RefSeq	CDS	4671648	4672763	.	-	0	ID=cds4057;Parent=gene4216;Dbxref=Genbank:YP_858643.1,GeneID:4487989;Name=YP_858643.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_858643.1;transl_table=11
NC_008570.1	RefSeq	gene	4672929	4673318	.	-	.	ID=gene4217;Dbxref=GeneID:4487990;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AHA_4221
NC_008570.1	RefSeq	CDS	4672929	4673318	.	-	0	ID=cds4058;Parent=gene4217;Dbxref=Genbank:YP_858644.1,GeneID:4487990;Name=YP_858644.1;Note=identified by similarity to SP:P0A9G4%3B match to protein family HMM PF00376%3B match to protein family HMM TIGR02044;gbkey=CDS;gene=cueR;product=Cu(I)-responsive transcriptional regulator;protein_id=YP_858644.1;transl_table=11
NC_008570.1	RefSeq	gene	4673329	4675749	.	-	.	ID=gene4218;Dbxref=GeneID:4487991;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AHA_4222
NC_008570.1	RefSeq	CDS	4673329	4675749	.	-	0	ID=cds4059;Parent=gene4218;Dbxref=Genbank:YP_858645.1,GeneID:4487991;Name=YP_858645.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=copA;product=copper-exporting ATPase;protein_id=YP_858645.1;transl_table=11
NC_008570.1	RefSeq	gene	4675930	4676583	.	-	.	ID=gene4219;Dbxref=GeneID:4487992;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AHA_4223
NC_008570.1	RefSeq	CDS	4675930	4676583	.	-	0	ID=cds4060;Parent=gene4219;Dbxref=Genbank:YP_858646.1,GeneID:4487992;Name=YP_858646.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=YP_858646.1;transl_table=11
NC_008570.1	RefSeq	gene	4676658	4677431	.	-	.	ID=gene4220;Dbxref=GeneID:4487993;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AHA_4224
NC_008570.1	RefSeq	CDS	4676658	4677431	.	-	0	ID=cds4061;Parent=gene4220;Dbxref=Genbank:YP_858647.1,GeneID:4487993;Name=YP_858647.1;Note=identified by match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM TIGR01966;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=YP_858647.1;transl_table=11
NC_008570.1	RefSeq	gene	4677521	4678384	.	+	.	ID=gene4221;Dbxref=GeneID:4487994;Name=AHA_4225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4225
NC_008570.1	RefSeq	CDS	4677521	4678384	.	+	0	ID=cds4062;Parent=gene4221;Dbxref=Genbank:YP_858648.1,GeneID:4487994;Name=YP_858648.1;Note=identified by match to protein family HMM PF03755%3B match to protein family HMM TIGR00255;gbkey=CDS;product=hypothetical protein;protein_id=YP_858648.1;transl_table=11
NC_008570.1	RefSeq	gene	4678551	4679618	.	+	.	ID=gene4222;Dbxref=GeneID:4487995;Name=AHA_4227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4227
NC_008570.1	RefSeq	CDS	4678551	4679618	.	+	0	ID=cds4063;Parent=gene4222;Dbxref=Genbank:YP_858649.1,GeneID:4487995;Name=YP_858649.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase;protein_id=YP_858649.1;transl_table=11
NC_008570.1	RefSeq	gene	4679459	4680577	.	-	.	ID=gene4223;Dbxref=GeneID:4487996;Name=AHA_4226;Note=D-glycero-D-manno-heptosyltransferase%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AHA_4226;pseudo=true
NC_008570.1	RefSeq	gene	4680633	4681571	.	-	.	ID=gene4224;Dbxref=GeneID:4487997;Name=AHA_4228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4228
NC_008570.1	RefSeq	CDS	4680633	4681571	.	-	0	ID=cds4064;Parent=gene4224;Dbxref=Genbank:YP_858650.1,GeneID:4487997;Name=YP_858650.1;gbkey=CDS;product=heptosyltransferase III;protein_id=YP_858650.1;transl_table=11
NC_008570.1	RefSeq	gene	4681750	4682415	.	-	.	ID=gene4225;Dbxref=GeneID:4487998;Name=AHA_4229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4229
NC_008570.1	RefSeq	CDS	4681750	4682415	.	-	0	ID=cds4065;Parent=gene4225;Dbxref=Genbank:YP_858651.1,GeneID:4487998;Name=YP_858651.1;Note=identified by match to protein family HMM PF01755;gbkey=CDS;product=lipooligosaccharide biosynthesis protein LpsA;protein_id=YP_858651.1;transl_table=11
NC_008570.1	RefSeq	gene	4682412	4683626	.	-	.	ID=gene4226;Dbxref=GeneID:4487999;Name=AHA_4230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4230
NC_008570.1	RefSeq	CDS	4682412	4683626	.	-	0	ID=cds4066;Parent=gene4226;Dbxref=Genbank:YP_858652.1,GeneID:4487999;Name=YP_858652.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;product=O-antigen polymerase;protein_id=YP_858652.1;transl_table=11
NC_008570.1	RefSeq	gene	4683630	4685480	.	-	.	ID=gene4227;Dbxref=GeneID:4488000;Name=AHA_4231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4231
NC_008570.1	RefSeq	CDS	4683630	4685480	.	-	0	ID=cds4067;Parent=gene4227;Dbxref=Genbank:YP_858653.1,GeneID:4488000;Name=YP_858653.1;Note=identified by match to protein family HMM PF01522;gbkey=CDS;product=protein WavL;protein_id=YP_858653.1;transl_table=11
NC_008570.1	RefSeq	gene	4685503	4686459	.	-	.	ID=gene4228;Dbxref=GeneID:4488001;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AHA_4232
NC_008570.1	RefSeq	CDS	4685503	4686459	.	-	0	ID=cds4068;Parent=gene4228;Dbxref=Genbank:YP_858654.1,GeneID:4488001;Name=YP_858654.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR02197;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=YP_858654.1;transl_table=11
NC_008570.1	RefSeq	gene	4686616	4687260	.	+	.	ID=gene4229;Dbxref=GeneID:4488002;Name=AHA_4233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4233
NC_008570.1	RefSeq	CDS	4686616	4687260	.	+	0	ID=cds4069;Parent=gene4229;Dbxref=Genbank:YP_858655.1,GeneID:4488002;Name=YP_858655.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_858655.1;transl_table=11
NC_008570.1	RefSeq	gene	4687376	4688566	.	+	.	ID=gene4230;Dbxref=GeneID:4488003;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AHA_4234
NC_008570.1	RefSeq	CDS	4687376	4688566	.	+	0	ID=cds4070;Parent=gene4230;Dbxref=Genbank:YP_858656.1,GeneID:4488003;Name=YP_858656.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;gene=kbl;product=2-amino-3-ketobutyrate CoA ligase;protein_id=YP_858656.1;transl_table=11
NC_008570.1	RefSeq	gene	4688623	4689651	.	+	.	ID=gene4231;Dbxref=GeneID:4488004;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AHA_4235
NC_008570.1	RefSeq	CDS	4688623	4689651	.	+	0	ID=cds4071;Parent=gene4231;Dbxref=Genbank:YP_858657.1,GeneID:4488004;Name=YP_858657.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=YP_858657.1;transl_table=11
NC_008570.1	RefSeq	gene	4689894	4690307	.	+	.	ID=gene4232;Dbxref=GeneID:4488005;Name=AHA_4236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4236
NC_008570.1	RefSeq	CDS	4689894	4690307	.	+	0	ID=cds4072;Parent=gene4232;Dbxref=Genbank:YP_858658.1,GeneID:4488005;Name=YP_858658.1;Note=identified by match to protein family HMM PF00034;gbkey=CDS;product=cytochrome c5;protein_id=YP_858658.1;transl_table=11
NC_008570.1	RefSeq	gene	4690393	4692678	.	+	.	ID=gene4233;Dbxref=GeneID:4488006;Name=AHA_4237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4237
NC_008570.1	RefSeq	CDS	4690393	4692678	.	+	0	ID=cds4073;Parent=gene4233;Dbxref=Genbank:YP_858659.1,GeneID:4488006;Name=YP_858659.1;Note=identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=GAF domain/GGDEF domain/EAL domain-containing protein;protein_id=YP_858659.1;transl_table=11
NC_008570.1	RefSeq	gene	4692686	4694698	.	-	.	ID=gene4234;Dbxref=GeneID:4489715;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AHA_4238
NC_008570.1	RefSeq	CDS	4692686	4694698	.	-	0	ID=cds4074;Parent=gene4234;Dbxref=Genbank:YP_858660.1,GeneID:4489715;Name=YP_858660.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01074;gbkey=CDS;gene=rep;product=ATP-dependent DNA helicase Rep;protein_id=YP_858660.1;transl_table=11
NC_008570.1	RefSeq	gene	4694851	4696071	.	+	.	ID=gene4235;Dbxref=GeneID:4489716;Name=AHA_4239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4239
NC_008570.1	RefSeq	CDS	4694851	4696071	.	+	0	ID=cds4075;Parent=gene4235;Dbxref=Genbank:YP_858661.1,GeneID:4489716;Name=YP_858661.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_858661.1;transl_table=11
NC_008570.1	RefSeq	gene	4696022	4696519	.	+	.	ID=gene4236;Dbxref=GeneID:4489717;Name=AHA_4240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4240
NC_008570.1	RefSeq	CDS	4696022	4696519	.	+	0	ID=cds4076;Parent=gene4236;Dbxref=Genbank:YP_858662.1,GeneID:4489717;Name=YP_858662.1;Note=identified by match to protein family HMM PF02657;gbkey=CDS;product=SufE protein;protein_id=YP_858662.1;transl_table=11
NC_008570.1	RefSeq	gene	4696537	4697373	.	-	.	ID=gene4237;Dbxref=GeneID:4489718;Name=AHA_4241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4241
NC_008570.1	RefSeq	CDS	4696537	4697373	.	-	0	ID=cds4077;Parent=gene4237;Dbxref=Genbank:YP_858663.1,GeneID:4489718;Name=YP_858663.1;Note=identified by match to protein family HMM PF00899;gbkey=CDS;product=ThiF domain-containing protein;protein_id=YP_858663.1;transl_table=11
NC_008570.1	RefSeq	gene	4697520	4697596	.	-	.	ID=gene4238;Dbxref=GeneID:4489719;Name=AHA_4242;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4242
NC_008570.1	RefSeq	tRNA	4697520	4697596	.	-	.	ID=rna155;Parent=gene4238;Dbxref=GeneID:4489719;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	exon	4697520	4697596	.	-	.	ID=id157;Parent=rna155;Dbxref=GeneID:4489719;gbkey=tRNA;product=tRNA-Asp
NC_008570.1	RefSeq	gene	4697694	4697813	.	-	.	ID=gene4239;Dbxref=GeneID:4489720;Name=rrfJ;gbkey=Gene;gene=rrfJ;gene_biotype=rRNA;locus_tag=AHA_4243
NC_008570.1	RefSeq	rRNA	4697694	4697813	.	-	.	ID=rna156;Parent=gene4239;Dbxref=GeneID:4489720;gbkey=rRNA;gene=rrfJ;product=5S ribosomal RNA
NC_008570.1	RefSeq	exon	4697694	4697813	.	-	.	ID=id158;Parent=rna156;Dbxref=GeneID:4489720;gbkey=rRNA;gene=rrfJ;product=5S ribosomal RNA
NC_008570.1	RefSeq	gene	4697928	4700816	.	-	.	ID=gene4240;Dbxref=GeneID:4489721;Name=rrlJ;gbkey=Gene;gene=rrlJ;gene_biotype=rRNA;locus_tag=AHA_4244
NC_008570.1	RefSeq	rRNA	4697928	4700816	.	-	.	ID=rna157;Parent=gene4240;Dbxref=GeneID:4489721;gbkey=rRNA;gene=rrlJ;product=23S ribosomal RNA
NC_008570.1	RefSeq	exon	4697928	4700816	.	-	.	ID=id159;Parent=rna157;Dbxref=GeneID:4489721;gbkey=rRNA;gene=rrlJ;product=23S ribosomal RNA
NC_008570.1	RefSeq	gene	4701054	4701129	.	-	.	ID=gene4241;Dbxref=GeneID:4489722;Name=AHA_4245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AHA_4245
NC_008570.1	RefSeq	tRNA	4701054	4701129	.	-	.	ID=rna158;Parent=gene4241;Dbxref=GeneID:4489722;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	exon	4701054	4701129	.	-	.	ID=id160;Parent=rna158;Dbxref=GeneID:4489722;gbkey=tRNA;product=tRNA-Glu
NC_008570.1	RefSeq	gene	4701326	4702875	.	-	.	ID=gene4242;Dbxref=GeneID:4489723;Name=rrsJ;gbkey=Gene;gene=rrsJ;gene_biotype=rRNA;locus_tag=AHA_4246
NC_008570.1	RefSeq	rRNA	4701326	4702875	.	-	.	ID=rna159;Parent=gene4242;Dbxref=GeneID:4489723;gbkey=rRNA;gene=rrsJ;product=16S ribosomal RNA
NC_008570.1	RefSeq	exon	4701326	4702875	.	-	.	ID=id161;Parent=rna159;Dbxref=GeneID:4489723;gbkey=rRNA;gene=rrsJ;product=16S ribosomal RNA
NC_008570.1	RefSeq	gene	4703283	4704401	.	-	.	ID=gene4243;Dbxref=GeneID:4489724;Name=AHA_4247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4247
NC_008570.1	RefSeq	CDS	4703283	4704401	.	-	0	ID=cds4078;Parent=gene4243;Dbxref=Genbank:YP_858664.1,GeneID:4489724;Name=YP_858664.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_858664.1;transl_table=11
NC_008570.1	RefSeq	gene	4704464	4705126	.	-	.	ID=gene4244;Dbxref=GeneID:4489725;Name=tonB-2;gbkey=Gene;gene=tonB-2;gene_biotype=protein_coding;locus_tag=AHA_4248
NC_008570.1	RefSeq	CDS	4704464	4705126	.	-	0	ID=cds4079;Parent=gene4244;Dbxref=Genbank:YP_858665.1,GeneID:4489725;Name=YP_858665.1;Note=identified by similarity to SP:Q51368%3B match to protein family HMM PF03544%3B match to protein family HMM TIGR01352;gbkey=CDS;gene=tonB-2;product=outer membrane receptor-mediated transport energizer protein TonB;protein_id=YP_858665.1;transl_table=11
NC_008570.1	RefSeq	gene	4705123	4705524	.	-	.	ID=gene4245;Dbxref=GeneID:4489726;Name=AHA_4249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4249
NC_008570.1	RefSeq	CDS	4705123	4705524	.	-	0	ID=cds4080;Parent=gene4245;Dbxref=Genbank:YP_858666.1,GeneID:4489726;Name=YP_858666.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;product=biopolymer transport exbD2 protein;protein_id=YP_858666.1;transl_table=11
NC_008570.1	RefSeq	gene	4705521	4706051	.	-	.	ID=gene4246;Dbxref=GeneID:4489727;Name=AHA_4250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4250
NC_008570.1	RefSeq	CDS	4705521	4706051	.	-	0	ID=cds4081;Parent=gene4246;Dbxref=Genbank:YP_858667.1,GeneID:4489727;Name=YP_858667.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=TonB system biopolymer transport component;protein_id=YP_858667.1;transl_table=11
NC_008570.1	RefSeq	gene	4706048	4707355	.	-	.	ID=gene4247;Dbxref=GeneID:4489728;Name=AHA_4251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4251
NC_008570.1	RefSeq	CDS	4706048	4707355	.	-	0	ID=cds4082;Parent=gene4247;Dbxref=Genbank:YP_858668.1,GeneID:4489728;Name=YP_858668.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=TonB system biopolymer transport component;protein_id=YP_858668.1;transl_table=11
NC_008570.1	RefSeq	gene	4707352	4708089	.	-	.	ID=gene4248;Dbxref=GeneID:4489729;Name=AHA_4252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4252
NC_008570.1	RefSeq	CDS	4707352	4708089	.	-	0	ID=cds4083;Parent=gene4248;Dbxref=Genbank:YP_858669.1,GeneID:4489729;Name=YP_858669.1;gbkey=CDS;product=chromosome segregation ATPase;protein_id=YP_858669.1;transl_table=11
NC_008570.1	RefSeq	gene	4708323	4708934	.	+	.	ID=gene4249;Dbxref=GeneID:4489730;Name=AHA_4253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4253
NC_008570.1	RefSeq	CDS	4708323	4708934	.	+	0	ID=cds4084;Parent=gene4249;Dbxref=Genbank:YP_858670.1,GeneID:4489730;Name=YP_858670.1;Note=identified by match to protein family HMM PF00196%3B match to protein family HMM PF03472;gbkey=CDS;product=transcriptional activator protein AhyR/asaR;protein_id=YP_858670.1;transl_table=11
NC_008570.1	RefSeq	gene	4708999	4710831	.	-	.	ID=gene4250;Dbxref=GeneID:4489731;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AHA_4254
NC_008570.1	RefSeq	CDS	4708999	4710831	.	-	0	ID=cds4085;Parent=gene4250;Dbxref=Genbank:YP_858671.1,GeneID:4489731;Name=YP_858671.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_858671.1;transl_table=11
NC_008570.1	RefSeq	gene	4710888	4711661	.	-	.	ID=gene4251;Dbxref=GeneID:4489732;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;locus_tag=AHA_4255
NC_008570.1	RefSeq	CDS	4710888	4711661	.	-	0	ID=cds4086;Parent=gene4251;Dbxref=Genbank:YP_858672.1,GeneID:4489732;Name=YP_858672.1;Note=identified by similarity to SP:P15082%3B match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;gene=srlR;product=glucitol operon repressor;protein_id=YP_858672.1;transl_table=11
NC_008570.1	RefSeq	gene	4711784	4712458	.	+	.	ID=gene4252;Dbxref=GeneID:4489733;Name=AHA_4256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4256
NC_008570.1	RefSeq	CDS	4711784	4712458	.	+	0	ID=cds4087;Parent=gene4252;Dbxref=Genbank:YP_858673.1,GeneID:4489733;Name=YP_858673.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulatory protein CreB;protein_id=YP_858673.1;transl_table=11
NC_008570.1	RefSeq	gene	4712455	4713876	.	+	.	ID=gene4253;Dbxref=GeneID:4489734;Name=AHA_4257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4257
NC_008570.1	RefSeq	CDS	4712455	4713876	.	+	0	ID=cds4088;Parent=gene4253;Dbxref=Genbank:YP_858674.1,GeneID:4489734;Name=YP_858674.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=sensory histidine kinase CreC;protein_id=YP_858674.1;transl_table=11
NC_008570.1	RefSeq	gene	4713960	4714754	.	+	.	ID=gene4254;Dbxref=GeneID:4487362;Name=AHA_4258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4258
NC_008570.1	RefSeq	CDS	4713960	4714754	.	+	0	ID=cds4089;Parent=gene4254;Dbxref=Genbank:YP_858675.1,GeneID:4487362;Name=YP_858675.1;Note=identified by match to protein family HMM PF00905;gbkey=CDS;product=beta-lactamase;protein_id=YP_858675.1;transl_table=11
NC_008570.1	RefSeq	gene	4714873	4716234	.	+	.	ID=gene4255;Dbxref=GeneID:4487363;Name=AHA_4259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4259
NC_008570.1	RefSeq	CDS	4714873	4716234	.	+	0	ID=cds4090;Parent=gene4255;Dbxref=Genbank:YP_858676.1,GeneID:4487363;Name=YP_858676.1;Note=identified by match to protein family HMM PF06123;gbkey=CDS;product=hypothetical protein;protein_id=YP_858676.1;transl_table=11
NC_008570.1	RefSeq	gene	4716285	4717646	.	-	.	ID=gene4256;Dbxref=GeneID:4487364;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AHA_4260
NC_008570.1	RefSeq	CDS	4716285	4717646	.	-	0	ID=cds4091;Parent=gene4256;Dbxref=Genbank:YP_858677.1,GeneID:4487364;Name=YP_858677.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01173;gbkey=CDS;gene=glmU;product=UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=YP_858677.1;transl_table=11
NC_008570.1	RefSeq	gene	4717741	4718160	.	-	.	ID=gene4257;Dbxref=GeneID:4487365;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AHA_4261
NC_008570.1	RefSeq	CDS	4717741	4718160	.	-	0	ID=cds4092;Parent=gene4257;Dbxref=Genbank:YP_858678.1,GeneID:4487365;Name=YP_858678.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=F0F1 ATP synthase subunit epsilon;protein_id=YP_858678.1;transl_table=11
NC_008570.1	RefSeq	gene	4718188	4719576	.	-	.	ID=gene4258;Dbxref=GeneID:4487366;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AHA_4262
NC_008570.1	RefSeq	CDS	4718188	4719576	.	-	0	ID=cds4093;Parent=gene4258;Dbxref=Genbank:YP_858679.1,GeneID:4487366;Name=YP_858679.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;gbkey=CDS;gene=atpD;product=F0F1 ATP synthase subunit beta;protein_id=YP_858679.1;transl_table=11
NC_008570.1	RefSeq	gene	4719610	4720476	.	-	.	ID=gene4259;Dbxref=GeneID:4487367;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AHA_4263
NC_008570.1	RefSeq	CDS	4719610	4720476	.	-	0	ID=cds4094;Parent=gene4259;Dbxref=Genbank:YP_858680.1,GeneID:4487367;Name=YP_858680.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;gene=atpG;product=F0F1 ATP synthase subunit gamma;protein_id=YP_858680.1;transl_table=11
NC_008570.1	RefSeq	gene	4720520	4722061	.	-	.	ID=gene4260;Dbxref=GeneID:4487368;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AHA_4264
NC_008570.1	RefSeq	CDS	4720520	4722061	.	-	0	ID=cds4095;Parent=gene4260;Dbxref=Genbank:YP_858681.1,GeneID:4487368;Name=YP_858681.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;gene=atpA;product=F0F1 ATP synthase subunit alpha;protein_id=YP_858681.1;transl_table=11
NC_008570.1	RefSeq	gene	4722077	4722610	.	-	.	ID=gene4261;Dbxref=GeneID:4487369;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AHA_4265
NC_008570.1	RefSeq	CDS	4722077	4722610	.	-	0	ID=cds4096;Parent=gene4261;Dbxref=Genbank:YP_858682.1,GeneID:4487369;Name=YP_858682.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=atpH;product=F0F1 ATP synthase subunit delta;protein_id=YP_858682.1;transl_table=11
NC_008570.1	RefSeq	gene	4722624	4723094	.	-	.	ID=gene4262;Dbxref=GeneID:4487370;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AHA_4266
NC_008570.1	RefSeq	CDS	4722624	4723094	.	-	0	ID=cds4097;Parent=gene4262;Dbxref=Genbank:YP_858683.1,GeneID:4487370;Name=YP_858683.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;gene=atpF;product=F0F1 ATP synthase subunit B;protein_id=YP_858683.1;transl_table=11
NC_008570.1	RefSeq	gene	4723147	4723389	.	-	.	ID=gene4263;Dbxref=GeneID:4487371;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AHA_4267
NC_008570.1	RefSeq	CDS	4723147	4723389	.	-	0	ID=cds4098;Parent=gene4263;Dbxref=Genbank:YP_858684.1,GeneID:4487371;Name=YP_858684.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;gene=atpE;product=F0F1 ATP synthase subunit C;protein_id=YP_858684.1;transl_table=11
NC_008570.1	RefSeq	gene	4723448	4724230	.	-	.	ID=gene4264;Dbxref=GeneID:4487372;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AHA_4268
NC_008570.1	RefSeq	CDS	4723448	4724230	.	-	0	ID=cds4099;Parent=gene4264;Dbxref=Genbank:YP_858685.1,GeneID:4487372;Name=YP_858685.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;gene=atpB;product=F0F1 ATP synthase subunit A;protein_id=YP_858685.1;transl_table=11
NC_008570.1	RefSeq	gene	4724239	4724631	.	-	.	ID=gene4265;Dbxref=GeneID:4487373;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AHA_4269
NC_008570.1	RefSeq	CDS	4724239	4724631	.	-	0	ID=cds4100;Parent=gene4265;Dbxref=Genbank:YP_858686.1,GeneID:4487373;Name=YP_858686.1;Note=identified by match to protein family HMM PF03899;gbkey=CDS;gene=atpI;product=ATP synthase F0%2C I subunit;protein_id=YP_858686.1;transl_table=11
NC_008570.1	RefSeq	gene	4724840	4725748	.	-	.	ID=gene4266;Dbxref=GeneID:4487374;Name=AHA_4270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4270
NC_008570.1	RefSeq	CDS	4724840	4725748	.	-	0	ID=cds4101;Parent=gene4266;Dbxref=Genbank:YP_858687.1,GeneID:4487374;Name=YP_858687.1;Note=identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=YP_858687.1;transl_table=11
NC_008570.1	RefSeq	gene	4725745	4726548	.	-	.	ID=gene4267;Dbxref=GeneID:4487375;Name=AHA_4271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4271
NC_008570.1	RefSeq	CDS	4725745	4726548	.	-	0	ID=cds4102;Parent=gene4267;Dbxref=Genbank:YP_858688.1,GeneID:4487375;Name=YP_858688.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=Soj protein;protein_id=YP_858688.1;transl_table=11
NC_008570.1	RefSeq	gene	4726557	4727201	.	-	.	ID=gene4268;Dbxref=GeneID:4487376;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=AHA_4272
NC_008570.1	RefSeq	CDS	4726557	4727201	.	-	0	ID=cds4103;Parent=gene4268;Dbxref=Genbank:YP_858689.1,GeneID:4487376;Name=YP_858689.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=YP_858689.1;transl_table=11
NC_008570.1	RefSeq	gene	4727222	4729111	.	-	.	ID=gene4269;Dbxref=GeneID:4487377;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=AHA_4273
NC_008570.1	RefSeq	CDS	4727222	4729111	.	-	0	ID=cds4104;Parent=gene4269;Dbxref=Genbank:YP_858690.1,GeneID:4487377;Name=YP_858690.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=YP_858690.1;transl_table=11
NC_008570.1	RefSeq	gene	4729621	4730184	.	-	.	ID=gene4270;Dbxref=GeneID:4487378;Name=AHA_4274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4274
NC_008570.1	RefSeq	CDS	4729621	4730184	.	-	0	ID=cds4105;Parent=gene4270;Dbxref=Genbank:YP_858691.1,GeneID:4487378;Name=YP_858691.1;Note=identified by match to protein family HMM PF00258;gbkey=CDS;product=protein MioC;protein_id=YP_858691.1;transl_table=11
NC_008570.1	RefSeq	gene	4730433	4732562	.	+	.	ID=gene4271;Dbxref=GeneID:4487379;Name=AHA_4275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4275
NC_008570.1	RefSeq	CDS	4730433	4732562	.	+	0	ID=cds4106;Parent=gene4271;Dbxref=Genbank:YP_858692.1,GeneID:4487379;Name=YP_858692.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01783;gbkey=CDS;product=ferrichrome receptor;protein_id=YP_858692.1;transl_table=11
NC_008570.1	RefSeq	gene	4732642	4734300	.	+	.	ID=gene4272;Dbxref=GeneID:4487380;Name=AHA_4276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4276
NC_008570.1	RefSeq	CDS	4732642	4734300	.	+	0	ID=cds4107;Parent=gene4272;Dbxref=Genbank:YP_858693.1,GeneID:4487380;Name=YP_858693.1;Note=efflux pump for the antibacterial peptide microcin J25;gbkey=CDS;product=multidrug transporter membrane protein/ATP-binding component;protein_id=YP_858693.1;transl_table=11
NC_008570.1	RefSeq	gene	4734323	4735087	.	+	.	ID=gene4273;Dbxref=GeneID:4488800;Name=AHA_4277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4277
NC_008570.1	RefSeq	CDS	4734323	4735087	.	+	0	ID=cds4108;Parent=gene4273;Dbxref=Genbank:YP_858694.1,GeneID:4488800;Name=YP_858694.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ferrichrome ABC transporter ATP-binding protein;protein_id=YP_858694.1;transl_table=11
NC_008570.1	RefSeq	gene	4735106	4736032	.	+	.	ID=gene4274;Dbxref=GeneID:4488801;Name=AHA_4278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4278
NC_008570.1	RefSeq	CDS	4735106	4736032	.	+	0	ID=cds4109;Parent=gene4274;Dbxref=Genbank:YP_858695.1,GeneID:4488801;Name=YP_858695.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=ferrichrome-binding periplasmic protein;protein_id=YP_858695.1;transl_table=11
NC_008570.1	RefSeq	gene	4736029	4738011	.	+	.	ID=gene4275;Dbxref=GeneID:4488802;Name=AHA_4279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4279
NC_008570.1	RefSeq	CDS	4736029	4738011	.	+	0	ID=cds4110;Parent=gene4275;Dbxref=Genbank:YP_858696.1,GeneID:4488802;Name=YP_858696.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=YP_858696.1;transl_table=11
NC_008570.1	RefSeq	gene	4738082	4739443	.	-	.	ID=gene4276;Dbxref=GeneID:4488803;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=AHA_4280
NC_008570.1	RefSeq	CDS	4738082	4739443	.	-	0	ID=cds4111;Parent=gene4276;Dbxref=Genbank:YP_858697.1,GeneID:4488803;Name=YP_858697.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=YP_858697.1;transl_table=11
NC_008570.1	RefSeq	gene	4739553	4741199	.	-	.	ID=gene4277;Dbxref=GeneID:4488804;Name=AHA_4281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4281
NC_008570.1	RefSeq	CDS	4739553	4741199	.	-	0	ID=cds4112;Parent=gene4277;Dbxref=Genbank:YP_858698.1,GeneID:4488804;Name=YP_858698.1;Note=identified by match to protein family HMM PF02096;gbkey=CDS;product=membrane protein OxaA;protein_id=YP_858698.1;transl_table=11
NC_008570.1	RefSeq	gene	4741205	4741432	.	-	.	ID=gene4278;Dbxref=GeneID:4488805;Name=AHA_4282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4282
NC_008570.1	RefSeq	CDS	4741205	4741432	.	-	0	ID=cds4113;Parent=gene4278;Dbxref=Genbank:YP_858699.1,GeneID:4488805;Name=YP_858699.1;Note=identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;product=hypothetical protein;protein_id=YP_858699.1;transl_table=11
NC_008570.1	RefSeq	gene	4741420	4741779	.	-	.	ID=gene4279;Dbxref=GeneID:4488806;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AHA_4283
NC_008570.1	RefSeq	CDS	4741420	4741779	.	-	0	ID=cds4114;Parent=gene4279;Dbxref=Genbank:YP_858700.1,GeneID:4488806;Name=YP_858700.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P;protein_id=YP_858700.1;transl_table=11
NC_008570.1	RefSeq	gene	4741779	4741913	.	-	.	ID=gene4280;Dbxref=GeneID:4488807;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AHA_4284
NC_008570.1	RefSeq	CDS	4741779	4741913	.	-	0	ID=cds4115;Parent=gene4280;Dbxref=Genbank:YP_858701.1,GeneID:4488807;Name=YP_858701.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=YP_858701.1;transl_table=11
NC_008570.1	RefSeq	gene	4742183	4742917	.	-	.	ID=gene4281;Dbxref=GeneID:4488808;Name=AHA_4285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4285
NC_008570.1	RefSeq	CDS	4742183	4742917	.	-	0	ID=cds4116;Parent=gene4281;Dbxref=Genbank:YP_858702.1,GeneID:4488808;Name=YP_858702.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=L-cystine ABC transporter ATP-binding protein;protein_id=YP_858702.1;transl_table=11
NC_008570.1	RefSeq	gene	4742930	4743598	.	-	.	ID=gene4282;Dbxref=GeneID:4488809;Name=AHA_4286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4286
NC_008570.1	RefSeq	CDS	4742930	4743598	.	-	0	ID=cds4117;Parent=gene4282;Dbxref=Genbank:YP_858703.1,GeneID:4488809;Name=YP_858703.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=amino-acid ABC transporter permease YckJ;protein_id=YP_858703.1;transl_table=11
NC_008570.1	RefSeq	gene	4743599	4744357	.	-	.	ID=gene4283;Dbxref=GeneID:4488810;Name=AHA_4287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AHA_4287
NC_008570.1	RefSeq	CDS	4743599	4744357	.	-	0	ID=cds4118;Parent=gene4283;Dbxref=Genbank:YP_858704.1,GeneID:4488810;Name=YP_858704.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=cystine-binding periplasmic protein;protein_id=YP_858704.1;transl_table=11
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